BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008738
(555 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255562314|ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
gi|223538602|gb|EEF40205.1| DNA gyrase subunit B, putative [Ricinus communis]
Length = 732
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/554 (87%), Positives = 530/554 (95%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGS+SGYSVSGGLHGVGLSVVNALSE LEVTVWRDGMEY Q+YSRG PV
Sbjct: 179 VLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEGLEVTVWRDGMEYRQRYSRGNPV 238
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L CH L V+S+DRQGT +RFWPDK+VFTTAI+FD+NTIAGR+RELAFLNPKLTI L+K
Sbjct: 239 TILMCHSLAVESRDRQGTCVRFWPDKEVFTTAIEFDYNTIAGRVRELAFLNPKLTITLKK 298
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED+DPEKNQY+EYF+AGGL EYV+WLNTDKKPLHDVVGF K++DGITID+ALQWCSDAYS
Sbjct: 299 EDNDPEKNQYDEYFYAGGLIEYVKWLNTDKKPLHDVVGFGKEIDGITIDMALQWCSDAYS 358
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G KASLTRTLNSLGKKSK +K+KDI+LSGEHVREGLTCI+
Sbjct: 359 DTILGYANSIRTIDGGTHIDGFKASLTRTLNSLGKKSKIIKEKDINLSGEHVREGLTCIV 418
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 419 SVKVPSPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAAL 478
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAK+AR+LVRQKSVLR+SSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 479 AAKKARELVRQKSVLRTSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAI 538
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDG
Sbjct: 539 LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 598
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQK LF+EGCIYVGVPPLYKVERGKQV YCYD+AELKK++SSFP NA
Sbjct: 599 AHIRTLLLTFFFRYQKALFEEGCIYVGVPPLYKVERGKQVYYCYDEAELKKLRSSFPQNA 658
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP+QLWETT++PEQR+LKQLV+EDAAEANVVFSSLMGARVD RKELI
Sbjct: 659 SYNIQRFKGLGEMMPLQLWETTMDPEQRLLKQLVVEDAAEANVVFSSLMGARVDVRKELI 718
Query: 542 QNAANLVNLDHLDI 555
Q++A VN+D LDI
Sbjct: 719 QSSARAVNIDLLDI 732
>gi|297739950|emb|CBI30132.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/554 (86%), Positives = 523/554 (94%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGMEY QKYSRGKPV
Sbjct: 154 VLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPV 213
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T+LT VLP +S D QGT IRFWPDK+VFTT IQFD+NTIAGRIRELAFLNP+L I LRK
Sbjct: 214 TSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRK 273
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPEKNQYNEY +AGGL EYV+WLNTDKKP+HDVVGFRK DGI+ID+ALQWCSDAYS
Sbjct: 274 EDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVALQWCSDAYS 333
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK +K+KDI+LSGEHVREGLTC+I
Sbjct: 334 DTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVI 393
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRKVVDQ+VQE+LTEYLELHPDVLD ILSKSL+ALKAAL
Sbjct: 394 SVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAAL 453
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 454 AAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAI 513
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYK+EEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDG
Sbjct: 514 LPLRGKILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 573
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPL+KVERGKQV YCYDDAELK+++ S P NA
Sbjct: 574 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNA 633
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
YSIQRFKGLGEMMPVQLWETT++PE+R+LKQLV+EDAAEANVVFSSLMGARVD RKELI
Sbjct: 634 SYSIQRFKGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELI 693
Query: 542 QNAANLVNLDHLDI 555
Q +A+ + LD LDI
Sbjct: 694 QKSASTMKLDQLDI 707
>gi|225441215|ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 719
Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/554 (86%), Positives = 523/554 (94%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGMEY QKYSRGKPV
Sbjct: 166 VLTVLHAGGKFGGASSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPV 225
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T+LT VLP +S D QGT IRFWPDK+VFTT IQFD+NTIAGRIRELAFLNP+L I LRK
Sbjct: 226 TSLTHRVLPTESTDLQGTHIRFWPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRK 285
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPEKNQYNEY +AGGL EYV+WLNTDKKP+HDVVGFRK DGI+ID+ALQWCSDAYS
Sbjct: 286 EDKDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVADGISIDVALQWCSDAYS 345
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK +K+KDI+LSGEHVREGLTC+I
Sbjct: 346 DTMLGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIIKEKDITLSGEHVREGLTCVI 405
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRKVVDQ+VQE+LTEYLELHPDVLD ILSKSL+ALKAAL
Sbjct: 406 SVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALKAAL 465
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 466 AAKRARELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAI 525
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYK+EEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDG
Sbjct: 526 LPLRGKILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 585
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPL+KVERGKQV YCYDDAELK+++ S P NA
Sbjct: 586 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNA 645
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
YSIQRFKGLGEMMPVQLWETT++PE+R+LKQLV+EDAAEANVVFSSLMGARVD RKELI
Sbjct: 646 SYSIQRFKGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELI 705
Query: 542 QNAANLVNLDHLDI 555
Q +A+ + LD LDI
Sbjct: 706 QKSASTMKLDQLDI 719
>gi|224086827|ref|XP_002307976.1| predicted protein [Populus trichocarpa]
gi|222853952|gb|EEE91499.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/554 (85%), Positives = 524/554 (94%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGS+SGYSVSGGLHGVGLSVVNALSE LEVTVWRDG EY QKYSRG PV
Sbjct: 100 VLTVLHAGGKFGGSNSGYSVSGGLHGVGLSVVNALSEELEVTVWRDGKEYQQKYSRGNPV 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTL C+ L +SKD++GTRIRFWPDK+VFTT IQFD+NT+ GR+RELAFLNPKL I+L+K
Sbjct: 160 TTLMCYELSAESKDQKGTRIRFWPDKEVFTTEIQFDYNTVGGRVRELAFLNPKLAISLKK 219
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED+DPEKNQY+E+F+AGGL EYV WLNTDKK LHDVV FRK+VDGI ID+ALQWCSDAYS
Sbjct: 220 EDNDPEKNQYDEHFYAGGLIEYVNWLNTDKKSLHDVVSFRKEVDGIAIDMALQWCSDAYS 279
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRT+DGGTHI+GVKASLTRTLN+ GKKSK +KDKDISLSGEHVREGLTCII
Sbjct: 280 DTILGYANSIRTVDGGTHIDGVKASLTRTLNNFGKKSKVIKDKDISLSGEHVREGLTCII 339
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+PEFEGQTKTRLGNPEVRKVV+QSVQEYLTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 340 SVKVPSPEFEGQTKTRLGNPEVRKVVEQSVQEYLTEYLELHPDVLDSILSKSLNALKAAL 399
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 400 AAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAI 459
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DE AMYKNEEIQNLI ALGLGVKGEDFKK+ALRYH+IIILTDADVDG
Sbjct: 460 LPLRGKILNIERRDEEAMYKNEEIQNLILALGLGVKGEDFKKDALRYHRIIILTDADVDG 519
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQV YC+DDAEL+KV+SSFP NA
Sbjct: 520 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVYYCFDDAELRKVQSSFPQNA 579
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QRFKGLGEMMP QLWETT++PEQR+LKQLV+EDAAEA+VVFSSLMG RVD RKELI
Sbjct: 580 SYNMQRFKGLGEMMPAQLWETTMDPEQRLLKQLVVEDAAEASVVFSSLMGTRVDGRKELI 639
Query: 542 QNAANLVNLDHLDI 555
Q AA ++N+DHLDI
Sbjct: 640 QKAARMINVDHLDI 653
>gi|75288399|sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|38017095|gb|AAR07943.1| DNA gyrase B subunit [Nicotiana benthamiana]
Length = 731
Score = 976 bits (2524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/554 (87%), Positives = 529/554 (95%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGSSSGY+VSGGLHGVGLSVVNALS++LEVT+WRDG EY QKYSRGKP+
Sbjct: 178 VLTVLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSQALEVTIWRDGKEYQQKYSRGKPI 237
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTL CH LPV+ +DRQGT IRFWPDK+VFTT +QFD+NTIAGRIRELAFLNP+LTIAL+K
Sbjct: 238 TTLICHDLPVEMRDRQGTAIRFWPDKEVFTTEMQFDYNTIAGRIRELAFLNPELTIALKK 297
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPEK Q NEYF+AGGL EYV+WLN DKKPLHDV+GFRK+ DGITID+ALQWCSDAYS
Sbjct: 298 EDIDPEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYS 357
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHI+GVKA+LTR LN+LGKKSKT+K+KDISLSGEHVREGLTC+I
Sbjct: 358 DTMLGYANSIRTIDGGTHIDGVKAALTRILNNLGKKSKTIKEKDISLSGEHVREGLTCVI 417
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 418 SVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAAL 477
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVL+SSSLPGKLADCS+T PEE+EIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 478 AAKRARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAI 537
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDG
Sbjct: 538 LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 597
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LF+EGCIYVGVPPLYKVERGKQV YCYDDAELKKV+ SFPSNA
Sbjct: 598 AHIRTLLLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNA 657
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV+EDAAEANVVFSSLMG+RVD RK+LI
Sbjct: 658 SYNIQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLI 717
Query: 542 QNAANLVNLDHLDI 555
QN+A+++NL+ LDI
Sbjct: 718 QNSASMMNLEQLDI 731
>gi|356504692|ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 726
Score = 973 bits (2514), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/554 (84%), Positives = 521/554 (94%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG++SGYSVSGGLHGVGLSVVNALSESLE+TVWRDGMEY Q YSRGKPV
Sbjct: 173 VLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSESLEITVWRDGMEYMQTYSRGKPV 232
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L C VLP + KD +GTR+RFWPDK+VFTTAIQFDHNTIAGRIRELAFLNPKLTI LRK
Sbjct: 233 SILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKLTITLRK 292
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED+DPEK QYNEYF+AGGL EYV+WLNTDKK LHDV+ FRK+ DGIT+D+A QWC DAYS
Sbjct: 293 EDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAFQWCEDAYS 352
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+ +KAS+TRTLNSLGKKSK +K+KDI+LSGEHVREGLTC++
Sbjct: 353 DTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVV 412
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAAL
Sbjct: 413 SVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAAL 472
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVLRSSSLPGKLADCSST PEE EIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 473 AAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQGRDRRFQAI 532
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILTDADVDG
Sbjct: 533 LPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDG 592
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKV RGKQV YCYDDA+LKK++ SFP+NA
Sbjct: 593 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLQRSFPANA 652
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDAAEAN+VFSSLMG RVD RKELI
Sbjct: 653 SYNMQRFKGLGEMMPLQLWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTRVDVRKELI 712
Query: 542 QNAANLVNLDHLDI 555
+N+A+L++L LDI
Sbjct: 713 RNSASLIDLHQLDI 726
>gi|224139720|ref|XP_002323244.1| predicted protein [Populus trichocarpa]
gi|222867874|gb|EEF05005.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/554 (84%), Positives = 520/554 (93%), Gaps = 8/554 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGS+SGY VSGGLHGVGLSVVNALSE LEVTVWRDG +Y QKYSRG PV
Sbjct: 155 VLTVLHAGGKFGGSNSGYRVSGGLHGVGLSVVNALSEELEVTVWRDGKQYQQKYSRGNPV 214
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTLTCH LPV+SK+R+GT I+FWPDK+VFTT IQFD++TIAGR+RELAFLNPK
Sbjct: 215 TTLTCHELPVESKERRGTHIKFWPDKEVFTTEIQFDYHTIAGRVRELAFLNPK------- 267
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
D+DPEKNQ++E+F+AGGL EYV WLNTDKKPLHDV+GFRK+VDGI ID+ALQWCSDAYS
Sbjct: 268 -DNDPEKNQFDEHFYAGGLVEYVNWLNTDKKPLHDVLGFRKEVDGIAIDMALQWCSDAYS 326
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRT+DGGTHI+G KASLTRTLN+LGKKSK +KDKD+SLSGEHVREGLTCII
Sbjct: 327 DTILGYANSIRTVDGGTHIDGAKASLTRTLNNLGKKSKVIKDKDMSLSGEHVREGLTCII 386
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+PEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPD LDSILSKSL+ALKAAL
Sbjct: 387 SVKVPSPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDALDSILSKSLNALKAAL 446
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVL+SSSLPGKLADCSST PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 447 AAKRARELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAI 506
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILTDADVDG
Sbjct: 507 LPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDG 566
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQ YC+DDAELKK++ SFP NA
Sbjct: 567 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAYYCFDDAELKKIQRSFPQNA 626
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT++PE+R+LKQLV+EDAAEAN+VFSSLMG RVD RKELI
Sbjct: 627 SYNIQRFKGLGEMMPAQLWETTMDPERRVLKQLVVEDAAEANIVFSSLMGTRVDFRKELI 686
Query: 542 QNAANLVNLDHLDI 555
QNAA+++N+DHLDI
Sbjct: 687 QNAASMINVDHLDI 700
>gi|356571931|ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Glycine max]
Length = 724
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/554 (83%), Positives = 518/554 (93%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG++SGYSVSGGLHGVGLSVVNALSE LE+TVWRDGMEY Q YSRGKPV
Sbjct: 171 VLTVLHAGGKFGGANSGYSVSGGLHGVGLSVVNALSELLEITVWRDGMEYMQTYSRGKPV 230
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L C VLP + KD +GTR+RFWPDK+VFTTAIQFDHNTIAGRIRELAFLNPKLTI RK
Sbjct: 231 SILKCLVLPDERKDLRGTRVRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKLTITFRK 290
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED+DPEK QYNEYF+AGGL EYV+WLNTDKK LHDV+ FRK+ DGIT+D+A QW DAYS
Sbjct: 291 EDNDPEKVQYNEYFYAGGLVEYVKWLNTDKKALHDVLSFRKETDGITVDIAFQWSEDAYS 350
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+ +KAS+TRTLNSLGKKSK +K+KDI+LSGEHVREGLTC++
Sbjct: 351 DTILGYANSIRTIDGGTHIDAMKASITRTLNSLGKKSKVIKEKDITLSGEHVREGLTCVV 410
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAAL
Sbjct: 411 SVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAAL 470
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVLRSSSLPGKLADCSST PEE EIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 471 AAKRARELVRQKSVLRSSSLPGKLADCSSTDPEECEIFIVEGDSAGGSAKQGRDRRFQAI 530
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILTDADVDG
Sbjct: 531 LPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDG 590
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKV RGKQV YCYDDA+LKK++ SFP NA
Sbjct: 591 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVVRGKQVHYCYDDADLKKLQRSFPPNA 650
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDAAEAN+VFSSLMG RVD RKELI
Sbjct: 651 SYNMQRFKGLGEMMPLQLWETTMDPERRLLKQLKVEDAAEANIVFSSLMGTRVDFRKELI 710
Query: 542 QNAANLVNLDHLDI 555
+N+A++++LD LDI
Sbjct: 711 RNSASMIDLDQLDI 724
>gi|18414465|ref|NP_568133.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|75165162|sp|Q94BZ7.1|GYRBM_ARATH RecName: Full=DNA gyrase subunit B, mitochondrial; Flags: Precursor
gi|14517374|gb|AAK62578.1| AT3g10270/F14P13_13 [Arabidopsis thaliana]
gi|22655426|gb|AAM98305.1| At3g10270/F14P13_13 [Arabidopsis thaliana]
gi|332003319|gb|AED90702.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 732
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/554 (84%), Positives = 518/554 (93%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME+ Q YSRGKP+
Sbjct: 179 VLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQNYSRGKPI 238
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+K
Sbjct: 239 TTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKK 298
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYS
Sbjct: 299 EDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYS 358
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+
Sbjct: 359 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIV 418
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+SKSL+A KAAL
Sbjct: 419 SVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAAL 478
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 479 AAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSEIFIVEGDSAGGSAKQGRDRRFQAI 538
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHKIIILTDADVDG
Sbjct: 539 LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDG 598
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK QYCYDDA+LKK+ S+FP+NA
Sbjct: 599 AHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKNAQYCYDDADLKKITSNFPANA 658
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLMGARVD RKELI
Sbjct: 659 SYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELI 718
Query: 542 QNAANLVNLDHLDI 555
+NAA +NL LDI
Sbjct: 719 KNAATRINLQRLDI 732
>gi|297810505|ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
gi|297318973|gb|EFH49395.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
lyrata]
Length = 729
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/554 (83%), Positives = 518/554 (93%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEVTVWRDGME+ Q YSRGKP+
Sbjct: 176 VLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEHKQNYSRGKPI 235
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTLTC VL ++S+ +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+K
Sbjct: 236 TTLTCRVLTLESERTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKK 295
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPEKNQY+EY+FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYS
Sbjct: 296 EDDDPEKNQYSEYYFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYS 355
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+
Sbjct: 356 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNALAKKSKTVKEKDISLSGEHVREGLTCIV 415
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++PNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPDVL+SI+SKSL+A KAAL
Sbjct: 416 SVKIPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDVLESIVSKSLNAYKAAL 475
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADCSST PE SEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 476 AAKRARELVRSKSVLKSSSLPGKLADCSSTDPEASEIFIVEGDSAGGSAKQGRDRRFQAI 535
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDFKKE LRYHKIIILTDADVDG
Sbjct: 536 LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKIIILTDADVDG 595
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGK YCYDDA+LKK+ S+FP+NA
Sbjct: 596 AHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKHAHYCYDDADLKKITSNFPANA 655
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT+NPE R+LKQLV++D AEAN+ FSSLMGARVD RKELI
Sbjct: 656 SYNIQRFKGLGEMMPEQLWETTMNPETRILKQLVVDDIAEANMTFSSLMGARVDVRKELI 715
Query: 542 QNAANLVNLDHLDI 555
+NAA +NL LDI
Sbjct: 716 KNAATRINLQRLDI 729
>gi|9955568|emb|CAC05495.1| DNA gyrase subunit B-like protein [Arabidopsis thaliana]
Length = 760
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/584 (79%), Positives = 518/584 (88%), Gaps = 30/584 (5%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME+ Q YSRGKP+
Sbjct: 177 VLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQNYSRGKPI 236
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQ------------------------------VFT 91
TTLTC VLP++SK +GT IRFWPDK+ VFT
Sbjct: 237 TTLTCRVLPLESKGTKGTSIRFWPDKEGFACFPLLTTLPKPKLDLMINFPLWNELFSVFT 296
Query: 92 TAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK 151
TAI+FDHNTIAGRIRELAFLNPK+TI+L+KED DPEK QY+EY FAGGL EYV WLNTDK
Sbjct: 297 TAIEFDHNTIAGRIRELAFLNPKVTISLKKEDDDPEKTQYSEYSFAGGLTEYVSWLNTDK 356
Query: 152 KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 211
P+HDV+GFR++++G T+D+ALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL
Sbjct: 357 NPIHDVLGFRREINGATVDVALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL 416
Query: 212 NSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSV 271
N+L KKSKTVK+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSV
Sbjct: 417 NTLAKKSKTVKEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSV 476
Query: 272 QEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSST 331
QEYLTE+LELHPD+L+SI+SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCSST
Sbjct: 477 QEYLTEFLELHPDILESIISKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCSST 536
Query: 332 TPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRA 391
PE SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI
Sbjct: 537 DPEVSEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILG 596
Query: 392 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 451
LGLGVKGEDFKKE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPP
Sbjct: 597 LGLGVKGEDFKKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPP 656
Query: 452 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 511
L+KVERGK QYCYDDA+LKK+ S+FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R+L
Sbjct: 657 LFKVERGKNAQYCYDDADLKKITSNFPANASYNIQRFKGLGEMMPEQLWETTMNPETRIL 716
Query: 512 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
KQLV++D AEAN+ FSSLMGARVD RKELI+NAA +NL LDI
Sbjct: 717 KQLVVDDIAEANMTFSSLMGARVDVRKELIKNAATRINLQRLDI 760
>gi|449488224|ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/554 (85%), Positives = 516/554 (93%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEV++WRDG E+HQKYSRGKP
Sbjct: 166 VLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPT 225
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ LT HV + K+ QGT IRFWPDK+VFTT IQFD+NTI+GRIRELAFLNPKLTIAL K
Sbjct: 226 SILTSHVPSSELKNHQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTIALTK 285
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED+D EKNQYNEY +AGGL EYV WLN+DK P+H+V GFRK+ DG+ ID+ALQWC+DAYS
Sbjct: 286 EDNDLEKNQYNEYCYAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYS 345
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK KDKDISLSGEHVREGLTC++
Sbjct: 346 DTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVV 405
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SVRV NPEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPDVL+ ILSKSL+ALKAAL
Sbjct: 406 SVRVRNPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAAL 465
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVLRSSSLPGKLADCSS PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 466 AAKRARELVRQKSVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAI 525
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEI NLIRALGLG KGEDFKK+ALRYHKIIILTDADVDG
Sbjct: 526 LPLRGKILNIERKDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDG 585
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQV YCYDD ELKKV+SSFPSNA
Sbjct: 586 AHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNA 645
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RKELI
Sbjct: 646 SYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELI 705
Query: 542 QNAANLVNLDHLDI 555
Q +A+ +NL+HLDI
Sbjct: 706 QKSASTMNLEHLDI 719
>gi|449453173|ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 719
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/554 (85%), Positives = 515/554 (92%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEV++WRDG E+HQKYSRGKP
Sbjct: 166 VLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVSIWRDGNEFHQKYSRGKPA 225
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ LT HV + K+ QGT IRFWPDK+VFTT IQFD+NTI+GRIRELAFLNPKLTI L K
Sbjct: 226 SILTSHVPSSELKNHQGTHIRFWPDKEVFTTGIQFDYNTISGRIRELAFLNPKLTITLTK 285
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED+D EKNQYNEY +AGGL EYV WLN+DK P+H+V GFRK+ DG+ ID+ALQWC+DAYS
Sbjct: 286 EDNDLEKNQYNEYCYAGGLVEYVAWLNSDKNPIHEVFGFRKETDGVAIDVALQWCADAYS 345
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+KASLTRTLN+LGKKSK KDKDISLSGEHVREGLTC++
Sbjct: 346 DTILGYANSIRTIDGGTHIDGMKASLTRTLNNLGKKSKIFKDKDISLSGEHVREGLTCVV 405
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SVRV NPEFEGQTKTRLGNPEVRKVV+QS+QEYLTEYLELHPDVL+ ILSKSL+ALKAAL
Sbjct: 406 SVRVRNPEFEGQTKTRLGNPEVRKVVEQSIQEYLTEYLELHPDVLELILSKSLNALKAAL 465
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVRQKSVLRSSSLPGKLADCSS PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 466 AAKRARELVRQKSVLRSSSLPGKLADCSSIKPEESEIFIVEGDSAGGSAKQGRDRRFQAI 525
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEI NLIRALGLG KGEDFKK+ALRYHKIIILTDADVDG
Sbjct: 526 LPLRGKILNIERKDEAAMYKNEEINNLIRALGLGFKGEDFKKDALRYHKIIILTDADVDG 585
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQV YCYDD ELKKV+SSFPSNA
Sbjct: 586 AHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQVYYCYDDKELKKVQSSFPSNA 645
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RKELI
Sbjct: 646 SYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDAAEANVVFSSLMGVRVDFRKELI 705
Query: 542 QNAANLVNLDHLDI 555
Q +A+ +NL+HLDI
Sbjct: 706 QKSASTMNLEHLDI 719
>gi|378405244|sp|Q9SS38.3|GYRBP_ARATH RecName: Full=DNA gyrase subunit B, chloroplastic; Flags: Precursor
Length = 730
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/554 (84%), Positives = 516/554 (93%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPV
Sbjct: 177 VLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPV 236
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELAFLNPK+TI+L+K
Sbjct: 237 TTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKVTISLKK 296
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSDAYS
Sbjct: 297 EDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYS 356
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLTCI+
Sbjct: 357 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLTCIV 416
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A KAAL
Sbjct: 417 SVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYKAAL 476
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 477 AAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRFQAI 536
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYHKIIILTDADVDG
Sbjct: 537 LPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDG 596
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP NA
Sbjct: 597 AHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFPGNA 656
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV++DAAE N+VFSSLMGARVD RKELI
Sbjct: 657 SYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRKELI 716
Query: 542 QNAANLVNLDHLDI 555
++AA +NL++LDI
Sbjct: 717 KSAATRMNLENLDI 730
>gi|297833810|ref|XP_002884787.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
gi|297330627|gb|EFH61046.1| hypothetical protein ARALYDRAFT_478355 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/557 (83%), Positives = 517/557 (92%), Gaps = 3/557 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPV
Sbjct: 101 VLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPV 160
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
TTLTCHVLP +S+ QGT IRFWPDK+ +FTTAIQFDHNTIAGRIRELAFLNPK+TI+
Sbjct: 161 TTLTCHVLPPESRGTQGTCIRFWPDKEGFALFTTAIQFDHNTIAGRIRELAFLNPKVTIS 220
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSD
Sbjct: 221 LKKEDDDPERDLYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSD 280
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLT
Sbjct: 281 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLT 340
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
CI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A K
Sbjct: 341 CIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYK 400
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRF
Sbjct: 401 AALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRF 460
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYHKIIILTDAD
Sbjct: 461 QAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDAD 520
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP
Sbjct: 521 VDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFP 580
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+NA Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV+EDAAE N+VFSSLMGARVD RK
Sbjct: 581 ANASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVEDAAETNMVFSSLMGARVDVRK 640
Query: 539 ELIQNAANLVNLDHLDI 555
ELI++AA +NL++LDI
Sbjct: 641 ELIKSAATRMNLENLDI 657
>gi|6056198|gb|AAF02815.1|AC009400_11 putative DNA gyrase subunit B [Arabidopsis thaliana]
Length = 657
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/557 (83%), Positives = 516/557 (92%), Gaps = 3/557 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPV
Sbjct: 101 VLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPV 160
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
TTLTCHVLP +S+ QGT IRFWPDK+ +FTTAIQFDHNTIAGRIRELAFLNPK+TI+
Sbjct: 161 TTLTCHVLPPESRGTQGTCIRFWPDKEGFALFTTAIQFDHNTIAGRIRELAFLNPKVTIS 220
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
L+KED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSD
Sbjct: 221 LKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSD 280
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K+KDISLSGEHVREGLT
Sbjct: 281 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKEKDISLSGEHVREGLT 340
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
CI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTEYLELHPDVL+SI+SKSL+A K
Sbjct: 341 CIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKSLNAYK 400
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AALAAKRAR+LVR KSVL+SSSLPGKLADCSST P ESEIFIVEGDSAGGSAKQGRDRRF
Sbjct: 401 AALAAKRARELVRSKSVLKSSSLPGKLADCSSTDPAESEIFIVEGDSAGGSAKQGRDRRF 460
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+ERKDEAAMYKNEEIQNLI LGLGVKGEDF KE LRYHKIIILTDAD
Sbjct: 461 QAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDAD 520
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFF+RYQ+ LFD GCIYVGVPPL+KVERGKQ YCYDDA LKK+ +SFP
Sbjct: 521 VDGAHIRTLLLTFFFRYQRALFDAGCIYVGVPPLFKVERGKQAHYCYDDAALKKITASFP 580
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA Y+IQRFKGLGEMMP QLWETT+NP+ R+LKQLV++DAAE N+VFSSLMGARVD RK
Sbjct: 581 GNASYNIQRFKGLGEMMPAQLWETTMNPDTRILKQLVVDDAAETNMVFSSLMGARVDVRK 640
Query: 539 ELIQNAANLVNLDHLDI 555
ELI++AA +NL++LDI
Sbjct: 641 ELIKSAATRMNLENLDI 657
>gi|334185208|ref|NP_187638.5| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332641361|gb|AEE74882.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 772
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/586 (79%), Positives = 516/586 (88%), Gaps = 32/586 (5%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE+LEV V RDGME+ QKYSRGKPV
Sbjct: 187 VLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPV 246
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTLTCHVLP +S+ QGT IRFWPDK+VFTTAIQFDHNTIAGRIRELAFLNPK+TI+L+K
Sbjct: 247 TTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELAFLNPKVTISLKK 306
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPE++ Y+EYF+AGGL EYV WLNTDKKPLHDV+GFRK+++G T+D++LQWCSDAYS
Sbjct: 307 EDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEINGSTVDVSLQWCSDAYS 366
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK------------------- 222
DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSL KK K +K
Sbjct: 367 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLAKKLKVIKVKGYIIYSSPWIETKFKYS 426
Query: 223 -------------DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQ 269
+KDISLSGEHVREGLTCI+SV+VPNPEFEGQTKTRLGNPEVRK+VDQ
Sbjct: 427 SALKRHALRTINNEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTKTRLGNPEVRKIVDQ 486
Query: 270 SVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCS 329
SVQEYLTEYLELHPDVL+SI+SKSL+A KAALAAKRAR+LVR KSVL+SSSLPGKLADCS
Sbjct: 487 SVQEYLTEYLELHPDVLESIISKSLNAYKAALAAKRARELVRSKSVLKSSSLPGKLADCS 546
Query: 330 STTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLI 389
ST P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+ERKDEAAMYKNEEIQNLI
Sbjct: 547 STDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLI 606
Query: 390 RALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGV 449
LGLGVKGEDF KE LRYHKIIILTDADVDGAHIRTLLLTFF+RYQ+ LFD GCIYVGV
Sbjct: 607 LGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVGV 666
Query: 450 PPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQR 509
PPL+KVERGKQ YCYDDA LKK+ +SFP NA Y+IQRFKGLGEMMP QLWETT+NP+ R
Sbjct: 667 PPLFKVERGKQAHYCYDDAALKKITASFPGNASYNIQRFKGLGEMMPAQLWETTMNPDTR 726
Query: 510 MLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
+LKQLV++DAAE N+VFSSLMGARVD RKELI++AA +NL++LDI
Sbjct: 727 ILKQLVVDDAAETNMVFSSLMGARVDVRKELIKSAATRMNLENLDI 772
>gi|326518120|dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/554 (79%), Positives = 505/554 (91%), Gaps = 1/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS+S YSV+GGLHGVGLSVVNALSE+LEVTV RDG EY Q YSRGKP+
Sbjct: 170 VLTLMHAGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALEVTVCRDGKEYRQHYSRGKPL 229
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L+ LP +S RQG+ IRFWPDK++FTT I+FD +TI+ RIRELAFLNP+LTI L K
Sbjct: 230 TMLSSTTLPDESSSRQGSCIRFWPDKEIFTTTIEFDFSTISSRIRELAFLNPELTITLTK 289
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ D + Q+NEY +AGGL EYV WLNTDKKPLHD + FRK++DGI +D++LQWCSD+YS
Sbjct: 290 EEQDAQV-QHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYS 348
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHIEG+K SLTRT+N+ KKSK +KDKDISLSGEHVREG+TCII
Sbjct: 349 DTVLGYANSIRTIDGGTHIEGLKTSLTRTINNFAKKSKIMKDKDISLSGEHVREGMTCII 408
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 409 SVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAAL 468
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADC+S+ P E EIFIVEGDSAGGSAKQGRDR+FQAI
Sbjct: 469 AAKRARELVRTKSVLKSSSLPGKLADCASSNPAECEIFIVEGDSAGGSAKQGRDRKFQAI 528
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKI+ILTDADVDG
Sbjct: 529 LPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIVILTDADVDG 588
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQV YCYD+A+LK + ++FP+NA
Sbjct: 589 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVHYCYDEADLKDLVNTFPTNA 648
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+ QRFKGLGEMMP+QLWETT++PE+R+LKQL +EDA EANVVFSSLMGARV+ RKELI
Sbjct: 649 SYNTQRFKGLGEMMPLQLWETTMDPERRLLKQLTVEDAVEANVVFSSLMGARVEYRKELI 708
Query: 542 QNAANLVNLDHLDI 555
Q AA++VNLDHLDI
Sbjct: 709 QKAASIVNLDHLDI 722
>gi|242052563|ref|XP_002455427.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
gi|241927402|gb|EES00547.1| hypothetical protein SORBIDRAFT_03g010630 [Sorghum bicolor]
Length = 729
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/554 (79%), Positives = 504/554 (90%), Gaps = 2/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG +Y Q YSRGKP
Sbjct: 178 VLTLMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGNKYRQSYSRGKPT 237
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L+ L ++ RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L K
Sbjct: 238 TPLSSITLTGETSPRQGTSIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNPELTITLTK 297
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ Q+NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+D++LQW SD+YS
Sbjct: 298 EEG--HTVQHNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSLQWSSDSYS 355
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+KASLTRT+N+ KKSKT+KDKDI+LSGEHVREG+TC+I
Sbjct: 356 DTVLGYANSIRTIDGGTHIDGLKASLTRTINNFAKKSKTIKDKDITLSGEHVREGMTCVI 415
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+PEFEGQTKTRLGNPEVR++V+Q+VQE LTEYLELHPDVLDSILSKSL+ALKA+L
Sbjct: 416 SVKVPSPEFEGQTKTRLGNPEVRRIVEQAVQENLTEYLELHPDVLDSILSKSLNALKASL 475
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSS+PGKLADC+ST PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 476 AAKRARELVRSKSVLKSSSIPGKLADCASTNPEESEIFIVEGDSAGGSAKQGRDRRFQAI 535
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI ALGLGVKGEDFKKEALRYHKI+ILTDADVDG
Sbjct: 536 LPLRGKILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVILTDADVDG 595
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++ ++FP NA
Sbjct: 596 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKEIVNTFPPNA 655
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y IQRFKGLGEMMPVQLWETT++PE+R+LKQL +EDAAEANVVFSSLMG+RV+ RK+LI
Sbjct: 656 SYHIQRFKGLGEMMPVQLWETTMDPERRLLKQLKVEDAAEANVVFSSLMGSRVEYRKQLI 715
Query: 542 QNAANLVNLDHLDI 555
Q AA+ +++D LDI
Sbjct: 716 QEAASTISMDQLDI 729
>gi|357130405|ref|XP_003566839.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
Length = 723
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/554 (79%), Positives = 502/554 (90%), Gaps = 1/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS+S YSV+GGLHGVGLSVVNALSE+L+VTV+RDG EY Q YSRGKP+
Sbjct: 171 VLTLMHAGGKFGGSTSSYSVAGGLHGVGLSVVNALSEALDVTVYRDGKEYRQSYSRGKPL 230
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTL+ + +S RQGT IRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L K
Sbjct: 231 TTLSSTTVYGESSTRQGTCIRFWPDKDIFTTTIGFDFNTISSRIRELAFLNPELTITLTK 290
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ D E +NEY +AGGL EYV WLNTDKKPLHD + FRK++DGI +D++LQWCSD+YS
Sbjct: 291 EEDDAEV-LHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYS 349
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHIEG+K SLTRT+NS K SK +KDKDISLSGEHVREG+TCII
Sbjct: 350 DTVLGYANSIRTIDGGTHIEGLKTSLTRTVNSFAKNSKAIKDKDISLSGEHVREGMTCII 409
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
+V+VPNPEFEGQTKTRLGNPEVRK+V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 410 AVKVPNPEFEGQTKTRLGNPEVRKIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAAL 469
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADC+S+ P ESEIFIVEGDSAGGSAKQGRDR+FQAI
Sbjct: 470 AAKRARELVRTKSVLKSSSLPGKLADCASSNPAESEIFIVEGDSAGGSAKQGRDRKFQAI 529
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKKEALRYHKIIILTDADVDG
Sbjct: 530 LPLRGKILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDG 589
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYK+ERGKQ YCYD+A+LK++ ++FP+NA
Sbjct: 590 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKIERGKQAHYCYDEADLKELVNTFPTNA 649
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+ QRFKGLGEMMPVQLWETT++P +R+LKQL +EDAAEANVVFSSLMG+RVD RKELI
Sbjct: 650 SYNTQRFKGLGEMMPVQLWETTMDPARRLLKQLTVEDAAEANVVFSSLMGSRVDYRKELI 709
Query: 542 QNAANLVNLDHLDI 555
Q AA +VNL+HLDI
Sbjct: 710 QKAAGMVNLEHLDI 723
>gi|115435866|ref|NP_001042691.1| Os01g0268300 [Oryza sativa Japonica Group]
gi|75285839|sp|Q5NBJ3.1|GYRB_ORYSJ RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
Flags: Precursor
gi|56783730|dbj|BAD81142.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|56783751|dbj|BAD81163.1| putative DNA gyrase B subunit [Oryza sativa Japonica Group]
gi|113532222|dbj|BAF04605.1| Os01g0268300 [Oryza sativa Japonica Group]
Length = 729
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/554 (81%), Positives = 509/554 (91%), Gaps = 1/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY Q YSRGK +
Sbjct: 177 VLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAI 236
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP+LTIAL K
Sbjct: 237 TMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTK 296
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++LQWCSD+YS
Sbjct: 297 EEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYS 355
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHVREG+TCII
Sbjct: 356 DTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCII 415
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 416 AVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAAL 475
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQGRDR+FQAI
Sbjct: 476 AAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAI 535
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+ILTDADVDG
Sbjct: 536 LPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDG 595
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++ ++FP+NA
Sbjct: 596 AHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNA 655
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RK+LI
Sbjct: 656 SYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLI 715
Query: 542 QNAANLVNLDHLDI 555
QNAA++VNL+HLDI
Sbjct: 716 QNAASMVNLEHLDI 729
>gi|125569849|gb|EAZ11364.1| hypothetical protein OsJ_01229 [Oryza sativa Japonica Group]
Length = 753
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/554 (81%), Positives = 509/554 (91%), Gaps = 1/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY Q YSRGK +
Sbjct: 201 VLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRQNYSRGKAI 260
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP+LTIAL K
Sbjct: 261 TMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTK 320
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++LQWCSD+YS
Sbjct: 321 EEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYS 379
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHVREG+TCII
Sbjct: 380 DTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCII 439
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 440 AVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAAL 499
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQGRDR+FQAI
Sbjct: 500 AAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAI 559
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+ILTDADVDG
Sbjct: 560 LPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDG 619
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++ ++FP+NA
Sbjct: 620 AHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNA 679
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RK+LI
Sbjct: 680 SYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLI 739
Query: 542 QNAANLVNLDHLDI 555
QNAA++VNL+HLDI
Sbjct: 740 QNAASMVNLEHLDI 753
>gi|125525330|gb|EAY73444.1| hypothetical protein OsI_01322 [Oryza sativa Indica Group]
Length = 647
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/554 (80%), Positives = 508/554 (91%), Gaps = 1/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS SGY+VSGGLHGVGLSVVNALSE+LEVTVWRDG EY YSRGK +
Sbjct: 95 VLTLMHAGGKFGGSKSGYTVSGGLHGVGLSVVNALSEALEVTVWRDGKEYRLNYSRGKAI 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T LT L +S RQGTRIRFWPDK +FTT + FD NTIAGRIRELAFLNP+LTIAL K
Sbjct: 155 TMLTSRTLSDESSSRQGTRIRFWPDKHIFTTTMDFDFNTIAGRIRELAFLNPELTIALTK 214
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ D + Q+NEY +AGGL EYV+WLNTDKK LHD + FRK++DGIT+D++LQWCSD+YS
Sbjct: 215 EEDDLQV-QHNEYCYAGGLVEYVKWLNTDKKSLHDPIAFRKEMDGITVDVSLQWCSDSYS 273
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+K SLTRT+N+ KKSKT+KDKDISLSGEHVREG+TCII
Sbjct: 274 DTVLGYANSIRTIDGGTHIDGLKTSLTRTINNFAKKSKTLKDKDISLSGEHVREGMTCII 333
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
+V+VPNPEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 334 AVKVPNPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAAL 393
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADC+S+ PEESEIFIVEGDSAGGSAKQGRDR+FQAI
Sbjct: 394 AAKRARELVRTKSVLKSSSLPGKLADCASSDPEESEIFIVEGDSAGGSAKQGRDRKFQAI 453
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAA+YKNEEIQNLI ALGLGVKGEDF KEALRYHKI+ILTDADVDG
Sbjct: 454 LPLRGKILNIERRDEAALYKNEEIQNLIVALGLGVKGEDFNKEALRYHKIVILTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQK LFDEGCIYVGVPPLYKVERGKQ YCYDDA+LK++ ++FP+NA
Sbjct: 514 AHIRTLLLTFFFRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDDADLKELVNTFPTNA 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y IQRFKGLGEMMP QLWETT++PE+RMLKQL +EDAAEANVVFSSLMG RVD RK+LI
Sbjct: 574 SYHIQRFKGLGEMMPAQLWETTMDPERRMLKQLKVEDAAEANVVFSSLMGTRVDVRKQLI 633
Query: 542 QNAANLVNLDHLDI 555
QNAA++VNL+HLDI
Sbjct: 634 QNAASMVNLEHLDI 647
>gi|293336227|ref|NP_001168561.1| uncharacterized protein LOC100382343 [Zea mays]
gi|223949177|gb|ACN28672.1| unknown [Zea mays]
gi|414877013|tpg|DAA54144.1| TPA: hypothetical protein ZEAMMB73_725573 [Zea mays]
Length = 726
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/554 (80%), Positives = 503/554 (90%), Gaps = 2/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T++HAGGKFGGS SGYSVSGGLHGVGLSVVNALSE+LEVTVWRDG E+ Q YSRGKP
Sbjct: 175 VLTLMHAGGKFGGSKSGYSVSGGLHGVGLSVVNALSETLEVTVWRDGKEHRQSYSRGKPT 234
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T LT L ++ RQGTRIRFWPDK +FTT I FD NTI+ RIRELAFLNP+LTI L K
Sbjct: 235 TRLTSSTLTGETSSRQGTRIRFWPDKDIFTTTIDFDFNTISSRIRELAFLNPELTIILTK 294
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ Q NEY +AGGL EYV+WLNTDKKPLHD + FRK++DGIT+D++LQW SD+YS
Sbjct: 295 EEG--HTVQRNEYCYAGGLVEYVKWLNTDKKPLHDPIAFRKELDGITVDVSLQWSSDSYS 352
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRTIDGGTHI+G+KASLTRT+N+L KKSKT+KDKDI+LSGEHVREG+TCII
Sbjct: 353 DTVLGYANSIRTIDGGTHIDGLKASLTRTINNLAKKSKTIKDKDITLSGEHVREGMTCII 412
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+PEFEGQTKTRLGNPEVR++V+QSVQE LTEYLELHPDVLDSILSKSL+ALKAAL
Sbjct: 413 SVKVPSPEFEGQTKTRLGNPEVRRIVEQSVQENLTEYLELHPDVLDSILSKSLNALKAAL 472
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+LVR KSVL+SSSLPGKLADC+S PEESEIFIVEGDSAGGSAKQGRDRRFQAI
Sbjct: 473 AAKRARELVRTKSVLKSSSLPGKLADCASANPEESEIFIVEGDSAGGSAKQGRDRRFQAI 532
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILN+ER+DEAAMYKNEEIQNLI ALGLGVKGEDFKKEALRYHKI+ILTDADVDG
Sbjct: 533 LPLRGKILNIERRDEAAMYKNEEIQNLILALGLGVKGEDFKKEALRYHKIVILTDADVDG 592
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFDEGCIYVGVPPLYKVERGK YCYDDA+LK++ ++FP+NA
Sbjct: 593 AHIRTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKLAHYCYDDADLKEIVNTFPANA 652
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y IQRFKGLGEMMP QLWETT++PE+R+LKQL +EDAAEANVVFSSLMG RV+ RKELI
Sbjct: 653 SYHIQRFKGLGEMMPAQLWETTMDPERRLLKQLRVEDAAEANVVFSSLMGTRVEYRKELI 712
Query: 542 QNAANLVNLDHLDI 555
Q AA+++N+D LDI
Sbjct: 713 QKAASMINIDQLDI 726
>gi|357509407|ref|XP_003624992.1| DNA gyrase subunit B [Medicago truncatula]
gi|355500007|gb|AES81210.1| DNA gyrase subunit B [Medicago truncatula]
Length = 839
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/667 (68%), Positives = 515/667 (77%), Gaps = 113/667 (16%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG +SGYSVSGGLHGVGLSVVNALSE+LEVTVWR+G+EY Q YSRGKPV
Sbjct: 173 VLTILHAGGKFGGINSGYSVSGGLHGVGLSVVNALSEALEVTVWREGLEYTQTYSRGKPV 232
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTL C +LP ++KDRQGTRI+FWPDK+VFTTAI+F++NTIAGRIRELAFLNPKLTIALRK
Sbjct: 233 TTLNCVMLPFENKDRQGTRIKFWPDKEVFTTAIEFEYNTIAGRIRELAFLNPKLTIALRK 292
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDK------------------------------ 151
ED+DPEK Q NEYF+AGGL EYVQ+LNTDK
Sbjct: 293 EDNDPEKVQSNEYFYAGGLAEYVQFLNTDKESEGLFESDNGRWEGRFWYSGVSESAADVS 352
Query: 152 --------------KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGG 197
K +HDV+ FRK++DGIT+D+ALQWC DAYSDT+LGYANSIRT+DGG
Sbjct: 353 ALICFSNSLAWSVLKAVHDVLSFRKEIDGITVDIALQWCEDAYSDTILGYANSIRTVDGG 412
Query: 198 THIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE--------------GL------ 237
THI+G+KASLTRTLNSLGKKSK +K + G + GL
Sbjct: 413 THIDGMKASLTRTLNSLGKKSKVIKQFQLFFYGHDSKRQNEKRNSYYLLHNFGLWIVLLN 472
Query: 238 ----------TCII---------------------------SVRVPNPEFEGQTKTRLGN 260
TC + SV+VPNPEFEGQTKTRLGN
Sbjct: 473 RYQVIGRFRNTCFMPLTQNKCQEKDITLSGEHVREGLTCVVSVKVPNPEFEGQTKTRLGN 532
Query: 261 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 320
PEVRKVVDQS+QEYLTEYLELHPDVLDS+LSK+L+A KAALAAKRAR+LVRQKSVLRSSS
Sbjct: 533 PEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFKAALAAKRARELVRQKSVLRSSS 592
Query: 321 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ------------AILPLRGKI 368
LPGKLADCSS+ PE+ EIFIVEGDSAGGSAKQGRDRRFQ AILPLRGKI
Sbjct: 593 LPGKLADCSSSNPEDCEIFIVEGDSAGGSAKQGRDRRFQVKYTLSDESLQSAILPLRGKI 652
Query: 369 LNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLL 428
LN+ER+DEAAMYKNEEIQNLI LGLGVKGEDFKK+ALRYHKIIILTDADVDGAHIRTLL
Sbjct: 653 LNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTLL 712
Query: 429 LTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRF 488
LTFFYRYQ+ LFDEG IYVGVPPLYKV RGKQV YCYD+A+LKK+KSSF NA Y++QRF
Sbjct: 713 LTFFYRYQRALFDEGYIYVGVPPLYKVTRGKQVHYCYDEADLKKLKSSFAPNASYNMQRF 772
Query: 489 KGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 548
KGLGEMMP+QLWETT++PEQR+LK+L +EDAAEAN+VFSSLMGARVD RKELIQNAAN++
Sbjct: 773 KGLGEMMPLQLWETTMDPEQRLLKKLTVEDAAEANIVFSSLMGARVDVRKELIQNAANMI 832
Query: 549 NLDHLDI 555
+LD LDI
Sbjct: 833 DLDQLDI 839
>gi|148906969|gb|ABR16629.1| unknown [Picea sitchensis]
Length = 737
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/554 (73%), Positives = 489/554 (88%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALSE LEVTVWRDG E++Q ++ GKPV
Sbjct: 184 VLTVLHAGGKFGGESSGYSVSGGLHGVGLSVVNALSEKLEVTVWRDGKEWNQTFACGKPV 243
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T LT + + + K RQGTR+RFWPDK+VFTT +FD+NTI GR RELAFLNP++ I L++
Sbjct: 244 TELTSNEILGEFKFRQGTRVRFWPDKEVFTTTTEFDYNTIVGRARELAFLNPQVKITLKQ 303
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E+ D E YNEY +AGGL EYV WLN DK P+ + F ++ DG+ +++ALQWCSDAY+
Sbjct: 304 ENKDAENVTYNEYHYAGGLVEYVCWLNRDKTPILKPISFTREKDGVIVNVALQWCSDAYT 363
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRT DGG+H++GVK++LTRT N+LG+KSK +K+KD +LSGEHVREGLT I+
Sbjct: 364 DTLLGYANSIRTSDGGSHMDGVKSALTRTFNNLGRKSKLIKEKDENLSGEHVREGLTGIV 423
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP PEFEGQTKTRLGNPEVR++VDQ+VQEYLTEYLE +P VL+SILSK+L+A KAA+
Sbjct: 424 SVKVPKPEFEGQTKTRLGNPEVRRIVDQAVQEYLTEYLECNPGVLESILSKALNAYKAAM 483
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAK+AR+LVR+KSVLR S+LPGKLADCS++ P E+EIFIVEG+SAGGSAKQGRDRRFQAI
Sbjct: 484 AAKKARELVRRKSVLRPSALPGKLADCSASDPREAEIFIVEGESAGGSAKQGRDRRFQAI 543
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVERKDEAAMYKNEEIQNLI LGLG+KGEDFKK+ALRYHKIIILTDADVDG
Sbjct: 544 LPLRGKILNVERKDEAAMYKNEEIQNLILGLGLGLKGEDFKKDALRYHKIIILTDADVDG 603
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LF+EG IYVGVPPLYKVERG+Q YC+D+ ELKK++ +FPSNA
Sbjct: 604 AHIRTLLLTFFFRYQRALFEEGYIYVGVPPLYKVERGRQAHYCFDEDELKKLQKTFPSNA 663
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP+QLWETTL+P R LKQL +EDAAEAN+VFS LMG RV+ RKELI
Sbjct: 664 SYNIQRFKGLGEMMPLQLWETTLDPATRKLKQLTVEDAAEANMVFSLLMGNRVEPRKELI 723
Query: 542 QNAANLVNLDHLDI 555
+N+A+ ++++ LDI
Sbjct: 724 ENSASKISIEKLDI 737
>gi|168056555|ref|XP_001780285.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668339|gb|EDQ54949.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 640
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/557 (68%), Positives = 481/557 (86%), Gaps = 3/557 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVG+SVVNALSE ++VTVWR+G EY Q + GK V
Sbjct: 84 VLTVLHAGGKFGGESSGYSVSGGLHGVGISVVNALSERVDVTVWRNGHEYRQSFEFGKAV 143
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQ---VFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
+ L+ LP D K R GTR++F PDKQ +FT+ +FD+NTI+GR RELAFLNP++TI
Sbjct: 144 SPLSAFPLPNDQKGRTGTRVKFLPDKQGKQLFTSTTEFDYNTISGRARELAFLNPQVTIN 203
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
L +E ++ EK + N Y F+GGL EYV WLN DK+ LH+ + ++ +G+ ID+ALQW +D
Sbjct: 204 LMQEHANSEKVRSNAYHFSGGLNEYVLWLNNDKERLHEPISIHREREGVAIDVALQWSAD 263
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y+DT+LGYANSIRT DGGTH++G+KA++TRTLN+LG+K+K +K+KD +LSG+H REGLT
Sbjct: 264 QYTDTILGYANSIRTSDGGTHLDGMKAAVTRTLNTLGRKAKILKEKDENLSGDHAREGLT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
C+++V+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE +TEYLE HP+ L++ILSK+L A +
Sbjct: 324 CVVAVKVPNPEFEGQTKTRLGNPEVRRIVDQAVQELVTEYLEQHPNTLEAILSKALQAFR 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P +EIFIVEGDSAGGSAKQGRDRRF
Sbjct: 384 AAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDPRNAEIFIVEGDSAGGSAKQGRDRRF 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+ERKD+AA+YKN+EIQNLI ALGLGVKGE+F K++LRYHKIIILTDAD
Sbjct: 444 QAILPLRGKILNIERKDDAAIYKNQEIQNLILALGLGVKGEEFSKDSLRYHKIIILTDAD 503
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFF+RYQ+ LF+ GCIYVGVPPLYKVERGKQ YC+++++LK V +FP
Sbjct: 504 VDGAHIRTLLLTFFFRYQRALFEAGCIYVGVPPLYKVERGKQAHYCFNESDLKNVLKTFP 563
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
SNA Y+IQRFKGLGEMMP QLWETTL+P+QRMLK L +EDAAEA+++FS+LMG +V+ RK
Sbjct: 564 SNASYNIQRFKGLGEMMPQQLWETTLDPQQRMLKLLTLEDAAEASMMFSTLMGDKVEPRK 623
Query: 539 ELIQNAANLVNLDHLDI 555
ELI+ A+ + L++LD+
Sbjct: 624 ELIRTNASRMKLENLDL 640
>gi|168067741|ref|XP_001785766.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662596|gb|EDQ49430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 642
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/559 (68%), Positives = 483/559 (86%), Gaps = 5/559 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG +SGYSVSGGLHGVG+SVVNALSE ++VTVWR+G EY Q + GK V
Sbjct: 84 VLTVLHAGGKFGGDNSGYSVSGGLHGVGISVVNALSERVDVTVWRNGHEYKQSFEFGKSV 143
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQ-----VFTTAIQFDHNTIAGRIRELAFLNPKLT 116
+ L+ LP D K R GT ++F PDKQ +FT+ +FD++TI+GR RELAFLNP++T
Sbjct: 144 SHLSGSRLPRDQKGRTGTLVKFLPDKQGKSFLMFTSTTEFDYSTISGRTRELAFLNPQVT 203
Query: 117 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWC 176
I L+++ ++PEK + N Y F+GGL EYV WLN DK+ LH+ + + +GI ID++LQWC
Sbjct: 204 IYLKQDHANPEKIRSNTYHFSGGLSEYVLWLNNDKERLHEPISIHRKKEGIIIDVSLQWC 263
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y+DT++GYANSIRT DGGTH++G+KA++TRTLN+LG+K+K +K+KD +LSG+H REG
Sbjct: 264 ADSYTDTIIGYANSIRTSDGGTHLDGIKAAVTRTLNTLGRKAKILKEKDENLSGDHAREG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LTC++SV+VPNPEFEGQTKTRLGNPEVR++VDQ+VQE +TEYLE HP+ L++ILSK+L A
Sbjct: 324 LTCVVSVKVPNPEFEGQTKTRLGNPEVRRLVDQAVQELVTEYLEQHPNTLEAILSKALQA 383
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+AA+AAK+AR+LVR+K+VL+SS LPGKL+DCS T P+ SEIFIVEGDSAGGSAKQGRDR
Sbjct: 384 FRAAMAAKKARELVRRKNVLKSSMLPGKLSDCSCTDPKNSEIFIVEGDSAGGSAKQGRDR 443
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R+QAILPLRGKILN+ERKD+AA+YKN+EIQNLI ALGLGVKGE+F K+ LRYHKIIILTD
Sbjct: 444 RYQAILPLRGKILNIERKDDAAIYKNQEIQNLILALGLGVKGEEFSKDLLRYHKIIILTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFF+RYQ+ LF+ GCIYVGVPPLYKVERGKQ YC+++A+LK + +
Sbjct: 504 ADVDGAHIRTLLLTFFFRYQRALFESGCIYVGVPPLYKVERGKQAHYCFNEADLKNLLKT 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FPSNA Y+IQRFKGLGEMMP QLWETTL+P QRMLK L +EDAAEA+++FS+LMG +V+
Sbjct: 564 FPSNASYNIQRFKGLGEMMPQQLWETTLDPTQRMLKLLTLEDAAEASMMFSTLMGDKVEP 623
Query: 537 RKELIQNAANLVNLDHLDI 555
RKELIQN A+ + L++LD+
Sbjct: 624 RKELIQNNASRMKLENLDL 642
>gi|302761372|ref|XP_002964108.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
gi|300167837|gb|EFJ34441.1| hypothetical protein SELMODRAFT_405784 [Selaginella moellendorffii]
Length = 723
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/554 (64%), Positives = 452/554 (81%), Gaps = 4/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q + RGK V
Sbjct: 174 VLTVLHAGGKFGGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQVFQRGKAV 233
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+LT LP +S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP++TI L++
Sbjct: 234 GSLTTRSLPRESSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNPEVTINLKE 293
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E + ++ + F GGL EYV+WLN DK +HD + F + D I++++++QWCSDAYS
Sbjct: 294 ESATTDE----VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSMQWCSDAYS 349
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRT DGGTH++G+K LTRTLN LG++SK +++K +LSGEH REGLTC+I
Sbjct: 350 DTLLGYANSIRTADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHAREGLTCVI 409
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP PEFEGQTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+L A KAA
Sbjct: 410 SVKVPEPEFEGQTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKALQAYKAAE 469
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAK+AR+LVR+K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQGRDR FQAI
Sbjct: 470 AAKKARELVRRKNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQGRDRAFQAI 529
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPL+GKILN+ERKD+AA+YKN+EIQ+LI ALGLG +GE+F K+ LRYHKIIILTDADVDG
Sbjct: 530 LPLKGKILNIERKDDAAIYKNQEIQDLIVALGLGTRGEEFHKDTLRYHKIIILTDADVDG 589
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFD G IYVGVPPLYKVERGK YCY + EL+ + +F +NA
Sbjct: 590 AHIRTLLLTFFFRYQRALFDGGYIYVGVPPLYKVERGKHAHYCYSENELQGLLGTFAANA 649
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP+QLW+TTL+P +RMLK+L +EDA EA+ FS LMG +V+ RKELI
Sbjct: 650 PYNIQRFKGLGEMMPLQLWDTTLDPSKRMLKKLTLEDAVEASFTFSRLMGDKVEPRKELI 709
Query: 542 QNAANLVNLDHLDI 555
+A +LD+
Sbjct: 710 LKSAAQFKQQNLDV 723
>gi|302820792|ref|XP_002992062.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
gi|300140184|gb|EFJ06911.1| hypothetical protein SELMODRAFT_162108 [Selaginella moellendorffii]
Length = 618
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/554 (64%), Positives = 452/554 (81%), Gaps = 4/554 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SGY+VSGGLHGVG+SVVNALS+ LE TVWR+G EY Q + RGK V
Sbjct: 69 VLTVLHAGGKFGGDESGYTVSGGLHGVGVSVVNALSKRLEATVWRNGQEYRQVFQRGKAV 128
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+LT LP +S R GT ++F PD +VFTT FD N ++ R+RE+AFLNP++TI L++
Sbjct: 129 GSLTTRSLPRESSSRTGTCVKFLPDDEVFTTTTAFDPNIVSSRLREVAFLNPEVTINLKE 188
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
E + ++ + F GGL EYV+WLN DK +HD + F + D I++++++QWCSDAYS
Sbjct: 189 ESATTDE----VFHFGGGLVEYVEWLNQDKTKIHDPISFSVEKDDISVNVSMQWCSDAYS 244
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRT DGGTH++G+K LTRTLN LG++SK +++K +LSGEH REGLTC+I
Sbjct: 245 DTLLGYANSIRTADGGTHLDGLKMGLTRTLNILGRRSKAIREKGDNLSGEHAREGLTCVI 304
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP PEFEGQTKTRLGN EVRK+V+Q+V E +TEYLE PD L++ILSK+L A KAA
Sbjct: 305 SVKVPEPEFEGQTKTRLGNVEVRKIVEQAVIEQVTEYLEFRPDTLEAILSKALQAYKAAE 364
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAK+AR+LVR+K+VL++S+LPGKLADC+S+ P SEIFIVEG+SAGGSAKQGRDR FQAI
Sbjct: 365 AAKKARELVRRKNVLKTSTLPGKLADCTSSDPRVSEIFIVEGESAGGSAKQGRDRAFQAI 424
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPL+GKILN+ERKD+AA+YKN+EIQ+LI ALGLG +GE+F K+ LRYHKIIILTDADVDG
Sbjct: 425 LPLKGKILNIERKDDAAIYKNQEIQDLIVALGLGTRGEEFHKDTLRYHKIIILTDADVDG 484
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RYQ+ LFD G IYVGVPPLYKVERGK YCY + EL+ + +F +NA
Sbjct: 485 AHIRTLLLTFFFRYQRALFDGGYIYVGVPPLYKVERGKHAHYCYSENELQGLLGTFAANA 544
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y+IQRFKGLGEMMP+QLW+TTL+P +RMLK+L +EDA EA+ FS LMG +V+ RKELI
Sbjct: 545 PYNIQRFKGLGEMMPLQLWDTTLDPSKRMLKKLTLEDAVEASFTFSRLMGDKVEPRKELI 604
Query: 542 QNAANLVNLDHLDI 555
+A +LD+
Sbjct: 605 LKSAAQFKQQNLDV 618
>gi|254424108|ref|ZP_05037826.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
gi|196191597|gb|EDX86561.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7335]
Length = 645
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/558 (59%), Positives = 429/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S GY VSGGLHGVG+SVVNALSE +EVTVWR+G + Q++ +G P+
Sbjct: 93 VLTVLHAGGKFGGDS-GYKVSGGLHGVGVSVVNALSEWVEVTVWREGKVHTQRFEQGNPI 151
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + GT++ F PD +FT ++FD++TIA R+RELA+LN + I
Sbjct: 152 GKLKTS----KGSTKTGTQVTFKPDATIFTHTVEFDYDTIARRLRELAYLNAGVDITFTD 207
Query: 122 EDSD---PEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
D +K Q + YF+ GG+ EYV+++N +K+PLH DV+ D +G+ ++ ALQWC
Sbjct: 208 YRLDLIKADKPQVSHYFYEGGIREYVEYINNEKEPLHPDVIYVNSDKNGVQVEAALQWCG 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DA+SD ++G+AN+IRT+DGGTH+EG+K LTRT+N + +K K KD + +++GE++REGL
Sbjct: 268 DAFSDNLMGFANNIRTVDGGTHLEGLKTVLTRTMNVIARKRKKRKDTESNMAGENIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++SV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL+ +P V D+IL K++ A
Sbjct: 328 TAVVSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALTEYLDFNPSVADAILEKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AAK+ARDLVR+KSVL SS+LPGKL+DCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 NAAEAAKKARDLVRRKSVLESSTLPGKLSDCSSRDPGESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLG+KGEDF + LRYH+I ++TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGIKGEDFAPDTLRYHRICLMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERGK YCY + EL+ +
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGKNHTYCYSEKELQDGIDAM 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PTNAKYNIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAEADRIFTVLMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
++ I+ +N+ LDI
Sbjct: 628 RDFIETYGPRLNMADLDI 645
>gi|22298189|ref|NP_681436.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
gi|22294368|dbj|BAC08198.1| DNA gyrase subunit B [Thermosynechococcus elongatus BP-1]
Length = 640
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/555 (61%), Positives = 437/555 (78%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG GY VSGGLHGVG+SVVNALSE LEVTVWR+G +HQ+Y RG P
Sbjct: 93 VMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWLEVTVWRNGFVHHQRYERGVPT 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L P D+++R+GT + F+PD+Q+FT I+FD + R+RELA+LN + I +
Sbjct: 151 TPL--EKTP-DTEERRGTSVTFFPDRQIFTETIEFDAKVLMTRLRELAYLNAGIRIEFKD 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
P ++ Y + GG+ EYV+++ +K+PLH +++ + + D + ++ ALQWC+DAY
Sbjct: 208 LRVTPPLSE--TYCYEGGIREYVRYMVQEKEPLHPEIIYIQGEKDDVQVEAALQWCADAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ +LG+AN+IRTIDGGTH+EG+KA LTRTLN+LG+K +K+ + +L+GE++REGLT I
Sbjct: 266 SENLLGFANNIRTIDGGTHMEGLKAVLTRTLNALGRKRNKLKENNANLAGENIREGLTAI 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VPNPEFEGQTKT+LGN EVR +VD V LTEYL+ HP+V D+IL K++ A AA
Sbjct: 326 ISVKVPNPEFEGQTKTKLGNTEVRGIVDAIVGAALTEYLDFHPNVTDTILEKAIQAFNAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR++VR+KSVL SS+LPGKLADCSS P SEIFIVEGDSAGGSAKQGRDRRFQA
Sbjct: 386 EAARRAREMVRRKSVLESSTLPGKLADCSSRDPAVSEIFIVEGDSAGGSAKQGRDRRFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKGE+F LRYHKII++TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDPAKLRYHKIILMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYRYQ+ L ++G +Y+ PPLYKVERG+Q YCY D EL++ +SFP N
Sbjct: 506 GSHIRTLLLTFFYRYQQELVNQGFVYIACPPLYKVERGRQHFYCYSDRELQQQIASFPEN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLWETT+NPE R+LK++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 566 ANYTIQRFKGLGEMMPEQLWETTMNPETRILKRVEIEDAAEADRIFTILMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ + L++LDI
Sbjct: 626 IETYGPQLALENLDI 640
>gi|170077957|ref|YP_001734595.1| DNA gyrase subunit B [Synechococcus sp. PCC 7002]
gi|169885626|gb|ACA99339.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7002]
Length = 640
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/555 (60%), Positives = 429/555 (77%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTVWRD Y Q+Y RG P
Sbjct: 93 VMTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVWRDETTYKQRYERGVPQ 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
LT P + GT + F PD ++FT FD+NT+AGR+RELA+LN + I
Sbjct: 151 GELTEAPAP---QHLSGTSVCFLPDAKIFTETTVFDYNTLAGRLRELAYLNAGVRIVF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
D EK N YF+ GG++EYV ++N +K PLH+ ++ + +G+ +++ALQWC+DAY
Sbjct: 206 TDHRSEKQASNTYFYEGGIKEYVAYMNREKSPLHEEIIYVTGEKNGVQLEVALQWCTDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRT+DGGTH+EG+K+ LTRT+N++ +K +KD D +L+GE++REGLT +
Sbjct: 266 SDNLLGFANNIRTVDGGTHLEGLKSVLTRTMNTVARKRNKLKDNDSNLAGENIREGLTAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEY E + +V+D+IL K++ A KAA
Sbjct: 326 ISVKVPDPEFEGQTKTKLGNSEVRGIVDSFVGEVLTEYFEFNLNVVDAILEKAIQAFKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCS P ++EI++VEGDSAGGSAKQGRDR FQA
Sbjct: 386 EAARRARELVRRKSVLESSLLPGKLADCSERDPAKTEIYLVEGDSAGGSAKQGRDRAFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRYH+++I+TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFNPEKLRYHRVVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERGK YCY D EL+ S P N
Sbjct: 506 GAHIRTLLLTFFYRYQRELVDQGYIYIACPPLYKLERGKNHAYCYSDRELQDQISQLPDN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 566 AKYNIQRFKGLGEMMPQQLWDTTMNPESRTLKRVEIEDAAEADRIFTVLMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ A +N+D LDI
Sbjct: 626 IEMNAPKLNMDDLDI 640
>gi|390438149|ref|ZP_10226642.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
gi|389838422|emb|CCI30766.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis sp.
T1-4]
Length = 640
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/555 (60%), Positives = 430/555 (77%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG PV
Sbjct: 93 VLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I
Sbjct: 151 TEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKITF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D PE+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A QWC DAY
Sbjct: 206 SDYRPEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVAFQWCIDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +
Sbjct: 266 SDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA
Sbjct: 326 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAYKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQGRDRRFQA
Sbjct: 386 EAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQGRDRRFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+++TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIVLMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++ + FPSN
Sbjct: 506 GAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQKIAEFPSN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG RV R+E
Sbjct: 566 ANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ + +NL LDI
Sbjct: 626 IETHGSRLNLTDLDI 640
>gi|166367564|ref|YP_001659837.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|422301910|ref|ZP_16389275.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|425463513|ref|ZP_18842843.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
gi|166089937|dbj|BAG04645.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843]
gi|389788978|emb|CCI15027.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9806]
gi|389831668|emb|CCI25386.1| DNA gyrase subunit B, chloroplastic/mitochondrial [Microcystis
aeruginosa PCC 9809]
Length = 640
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/555 (60%), Positives = 429/555 (77%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG PV
Sbjct: 93 VLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I
Sbjct: 151 TEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKITF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D PE+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A QWC DAY
Sbjct: 206 SDYRPEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVAFQWCIDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +
Sbjct: 266 SDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA
Sbjct: 326 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAYKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RARDLVR+KSVL SS LPGKLADCS PE SEI+IVEGDSAGGSAKQGRDRRFQA
Sbjct: 386 EAARRARDLVRRKSVLESSPLPGKLADCSERDPERSEIYIVEGDSAGGSAKQGRDRRFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+++TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIVLMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++ + FPSN
Sbjct: 506 GAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQKIAEFPSN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG RV R+E
Sbjct: 566 ANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ + +NL LDI
Sbjct: 626 IETHGSRLNLTDLDI 640
>gi|159028965|emb|CAO87426.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 640
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/555 (60%), Positives = 428/555 (77%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG PV
Sbjct: 93 VLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I
Sbjct: 151 TEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKITF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A QWC DAY
Sbjct: 206 SDYRAEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVAFQWCIDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +
Sbjct: 266 SDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA
Sbjct: 326 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAYKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQGRDRRFQA
Sbjct: 386 EAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQGRDRRFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+++TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIVLMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++ + FPSN
Sbjct: 506 GAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQKIAEFPSN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG RV R+E
Sbjct: 566 ANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ +NL LDI
Sbjct: 626 IETHGPRLNLTDLDI 640
>gi|443654055|ref|ZP_21131209.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
gi|443333902|gb|ELS48439.1| DNA gyrase, B subunit [Microcystis aeruginosa DIANCHI905]
Length = 616
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/555 (60%), Positives = 428/555 (77%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFG S GY VSGGLHGVG+SVVNALS ++VTVWRD + Q+Y RG PV
Sbjct: 69 VLTILHAGGKFG--SGGYKVSGGLHGVGISVVNALSAWVDVTVWRDHKVHTQRYERGIPV 126
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V +++ GTR+ F PD ++F+ I+FD++T++GR+RELA+LN + I
Sbjct: 127 TEL---VSSPSQEEKTGTRVNFLPDTEIFSQGIEFDYSTLSGRLRELAYLNAGVKITF-- 181
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+ Y + GG++EYV ++ +K+ LH D++ + +GI I++A QWC DAY
Sbjct: 182 SDYRAEEPHIETYCYEGGIKEYVAYMCREKETLHKDIIYVSGEKNGINIEVAFQWCIDAY 241
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +
Sbjct: 242 SDNILGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTAV 301
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA
Sbjct: 302 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGETLNEYLEQNPQVADTIIEKAVQAYKAA 361
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RARDLVR+KSVL SS LPGKLADCS PE+SEI+IVEGDSAGGSAKQGRDRRFQA
Sbjct: 362 EAARRARDLVRRKSVLESSPLPGKLADCSERDPEKSEIYIVEGDSAGGSAKQGRDRRFQA 421
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF LRYH+I+++TDADVD
Sbjct: 422 ILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDPSQLRYHRIVLMTDADVD 481
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQK L D+G +Y+ PPLYK+ERGK YCY D EL++ + FPSN
Sbjct: 482 GAHIRTLLLTFFYRYQKNLIDQGYVYIACPPLYKLERGKNHSYCYSDRELQQKIAEFPSN 541
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAA+A +F+ LMG RV R+E
Sbjct: 542 ANYTIQRFKGLGEMMPQQLWDTTMNPETRTLKRVEIEDAAKAEELFTILMGDRVAPRREF 601
Query: 541 IQNAANLVNLDHLDI 555
I+ +NL LDI
Sbjct: 602 IETHGPRLNLTDLDI 616
>gi|424513000|emb|CCO66584.1| DNA gyrase subunit B [Bathycoccus prasinos]
Length = 811
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/553 (59%), Positives = 415/553 (75%), Gaps = 3/553 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG+ SGYSVSGGLHGVG+SVVNALSE LEVTVWR EY Q +SRGK
Sbjct: 258 VLTILHAGGKFGGAESGYSVSGGLHGVGVSVVNALSEELEVTVWRGDKEYFQTFSRGKTT 317
Query: 62 TTLTCHVLPV-DSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L D + GTR+RF PD +F +FD N I R++ELAFLN +
Sbjct: 318 SELQVSERKAKDGNPKTGTRVRFKPDNMIFQKVQEFDPNIIRARMKELAFLNSNAELRFT 377
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
DS ++ + + + GL +Y+ LN+DK +H+ + + + +G+ ++L LQW D Y
Sbjct: 378 SVDSKTKEMKEDVLKYPNGLTDYIVDLNSDKNAIHEPITLKTEHEGVKVELCLQWTHDDY 437
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SDT+LGYANSIRTIDGG+HI+G+K SLTR N+ +K+K +K +D +L G+H+REGL+ +
Sbjct: 438 SDTILGYANSIRTIDGGSHIDGLKFSLTRAFNTAARKAKLLKAEDTNLGGDHIREGLSAV 497
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
I+V VP PEFEGQTKTRLGN E RK V+ + E TEYLE HP+VL S+ K+ +ALKA+
Sbjct: 498 IAVWVPQPEFEGQTKTRLGNSEARKAVEAMISEKFTEYLEFHPEVLSSVFKKAQAALKAS 557
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRARDLVR+KSVLRSSSLPGKL+DC+++ +E+EIF+VEGDSAGGS KQGRDR FQA
Sbjct: 558 EAAKRARDLVRRKSVLRSSSLPGKLSDCANSNADETEIFLVEGDSAGGSCKQGRDRAFQA 617
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKILNVERKDE AMYKN EIQ+++ ALGLGV GEDF LRY KIIILTDADVD
Sbjct: 618 VLPLRGKILNVERKDEQAMYKNTEIQSMVTALGLGVMGEDFNVNNLRYSKIIILTDADVD 677
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFPS 479
GAHIRTLLLTF YRYQK LF++G IYV VPPLYKVE GK+ V+YCYD+ ELKK +
Sbjct: 678 GAHIRTLLLTFLYRYQKALFEQGHIYVAVPPLYKVESGKKNVKYCYDELELKKHLDTLGD 737
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N ++QRFKGLGEMMP QLW+TTL+P+ R L++L ++DAA N FS LM +V R++
Sbjct: 738 NQPKNLQRFKGLGEMMPQQLWDTTLDPKTRTLRRLTVDDAAMVNHTFSLLMSDKVGPRRQ 797
Query: 540 LIQN-AANLVNLD 551
I++ +L+NLD
Sbjct: 798 FIEDEGPDLMNLD 810
>gi|427711338|ref|YP_007059962.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
gi|427375467|gb|AFY59419.1| DNA gyrase subunit B [Synechococcus sp. PCC 6312]
Length = 640
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/555 (59%), Positives = 431/555 (77%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG GY VSGGLHGVG+SVVNALSE LEV VWR+ + Q+Y RG P+
Sbjct: 93 VMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWLEVKVWRNNTVFTQRYERGVPM 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L P +++R+GT + F+PD+Q+FT I+F+ + R+RELA+LN + I
Sbjct: 151 TALEPS--PA-TENRRGTSVTFFPDRQIFTETIEFEAKILTNRLRELAYLNAGIRIEFI- 206
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D+ E Q Y + GG+ EY+Q++ DK+PLH +++ + + + + +++ALQWCSDAY
Sbjct: 207 -DARGEIPQSEVYCYEGGIREYIQYMIQDKEPLHPEMIYVQGEKNDVQVEVALQWCSDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+++++G+AN+IRT +GGTH+EG+KA LTRTLNS+ +K +K+ D +L+GE++REGLT I
Sbjct: 266 NESLMGFANNIRTNEGGTHLEGLKAVLTRTLNSIARKRNKLKEGDSNLAGENIREGLTAI 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VPNPEFEGQTKT+LGN EVR +VD V E LTEYL+ P D+IL K++ A AA
Sbjct: 326 VSVKVPNPEFEGQTKTKLGNTEVRGIVDSVVGEALTEYLDFRPQAADAILEKAIQAFNAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR++VR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQA
Sbjct: 386 EAARRAREMVRRKSVLESSTLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRRFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EI LI ALGLG+KGEDF LRYH+I+I+TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNTEIHALITALGLGIKGEDFDSSQLRYHRIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+Q YCY+D +L++ +SFP N
Sbjct: 506 GAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKLERGRQHYYCYNDRQLQERIASFPEN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 566 ANYTIQRFKGLGEMMPQQLWDTTMNPETRMMKRVEIEDAAEADRMFTILMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ + L HLDI
Sbjct: 626 IETYGPKLALAHLDI 640
>gi|443312981|ref|ZP_21042595.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
gi|442777131|gb|ELR87410.1| DNA gyrase, B subunit [Synechocystis sp. PCC 7509]
Length = 646
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/559 (59%), Positives = 428/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG GY VSGGLHGVG+SVVNALSE +EVTVWRD + Q++ RG P+
Sbjct: 93 VMTVLHAGGKFG--DGGYKVSGGLHGVGISVVNALSEFVEVTVWRDKRVFTQRFERGIPI 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
L D + R GT I F PD ++FT I+FD+ T+A R+RELA+LN + I
Sbjct: 151 GDLQSKP---DKETRTGTSITFKPDSEIFTVGIEFDYITLASRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E +++ Y +AGG++EY+ ++N DK+PLH+ ++ + + + + ++++LQWC+
Sbjct: 208 HRLELLKSNESKTETYEYAGGIKEYISYINRDKQPLHEEIIYVQGERNNVQVEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D+Y+D +LG+AN+IRT +GGTH++G+KA LTRT+N++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DSYTDNVLGFANNIRTAEGGTHLDGLKAVLTRTMNAIARKRNKIKENEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VPNPEFEGQTKT+LGN EVR +VD V E LTEYLE P V D IL K++ A
Sbjct: 328 TAVISVKVPNPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPPVADQILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEI+IVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPSESEIYIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYH+I+I+TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDPSKLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV-KSS 476
DVDGAHIRTL+LTFFYRYQ++L ++G IY+ PPLYKVERG+ YCY + EL + ++
Sbjct: 508 DVDGAHIRTLILTFFYRYQRSLVEQGYIYIACPPLYKVERGRNHYYCYSERELNNLTQNE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPANANYTIQRFKGLGEMMPTQLWDTTMNPESRTLKRIEIEDAAEADRIFTVLMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +N LDI
Sbjct: 628 RREFIETYGPRLNFAELDI 646
>gi|359459125|ref|ZP_09247688.1| DNA gyrase subunit B [Acaryochloris sp. CCMEE 5410]
Length = 646
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/559 (60%), Positives = 425/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF G S Y VSGGLHGVG+SVVNALSE +E VWR+G + Q++ RG P
Sbjct: 93 VMTVLHAGGKFDGDS--YKVSGGLHGVGISVVNALSEWVEAKVWRNGKVHTQRFERGIPK 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
+ L P D K+ GT I F PD +FT +FD+ T+A R+RELA+LN + I+
Sbjct: 151 SELIAE--PTDRKE-SGTAITFLPDNTIFTVTTEFDYKTLASRLRELAYLNAGVEISFHD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + ++ + Y + GG++EYV ++N DK+P+H+ + + + + +++ALQWC
Sbjct: 208 NRLELLEADEPKVETYRYDGGIKEYVDYMNRDKEPIHEECIYVEGERNNVQVEVALQWCR 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+NSL +K +KD D +L GEH+REGL
Sbjct: 268 DAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNSLARKRSKLKDGDSNLGGEHIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP+V DS++ K+L A
Sbjct: 328 TAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPNVADSVIEKALQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSTSEIYIVEGDSAGGSAKQGRDRG 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+II++TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDVSQLRYHRIILMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSS 476
DVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+ YCY D EL+ V+
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRELIDQGYIYIACPPLYKIERGRSHYYCYSDRELQNLVQHE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPANANYTIQRFKGLGEMMPTQLWDTTMNPETRTLKQIDIEDAAEADRIFTILMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +NL LDI
Sbjct: 628 RREFIETHGPRLNLAELDI 646
>gi|158337618|ref|YP_001518793.1| DNA gyrase subunit B [Acaryochloris marina MBIC11017]
gi|158307859|gb|ABW29476.1| DNA gyrase, B subunit [Acaryochloris marina MBIC11017]
Length = 646
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/559 (60%), Positives = 426/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF G S Y VSGGLHGVG+SVVNALSE +E VWR+G + Q++ RG P
Sbjct: 93 VMTVLHAGGKFDGDS--YKVSGGLHGVGISVVNALSEWVEAKVWRNGKVHTQRFERGIPK 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
+ L V P D K+ GT I F PD +FT +FD+ T+A R+RELA+LN + I+
Sbjct: 151 SELV--VEPTDRKE-SGTAITFLPDDTIFTVTTEFDYKTLASRLRELAYLNAGVEISFHD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + ++ + Y + GG++EYV ++N DK+P+H+ + + + + +++ALQWC
Sbjct: 208 NRLELLEADEPKVETYRYDGGIKEYVDYMNRDKEPIHEECIYVEGERNNVQVEVALQWCR 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+NSL +K +KD D +L GEH+REGL
Sbjct: 268 DAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNSLARKRSKLKDGDSNLGGEHIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP+V DS++ K+L A
Sbjct: 328 TAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPNVADSVIEKALQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSTSEIYIVEGDSAGGSAKQGRDRG 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+II++TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDVSQLRYHRIILMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSS 476
DVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+ YCY D EL+ V+
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRELIDQGYIYIACPPLYKIERGRSHYYCYSDRELQNLVQHE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPANANYTIQRFKGLGEMMPTQLWDTTMNPETRTLKQIDIEDAAEADRIFTILMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +NL LDI
Sbjct: 628 RREFIETHGPRLNLAELDI 646
>gi|317968499|ref|ZP_07969889.1| DNA gyrase subunit B [Synechococcus sp. CB0205]
Length = 653
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/559 (59%), Positives = 425/559 (76%), Gaps = 9/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EV V+R G E+ Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVVVYRQGKEHRQRFERGAPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TL + P R GT +RF PD ++FT I+FD+NT++ R+RELA+LN + I R
Sbjct: 157 GTLA--IEPAADASRTGTTVRFKPDLEIFTVGIEFDYNTLSARLRELAYLNGGVKIVFRD 214
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E + E + E Y + GG++EYV ++N +K LH D++ + DG+ I+ ALQWC
Sbjct: 215 ERPAARNAEGEAHEEIYHYEGGIKEYVAYMNAEKDALHPDIIYVNSEKDGVQIEAALQWC 274
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD + G+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 275 VDAYSDNIFGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKESDSNLAGENIREG 334
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V+D IL K++ A
Sbjct: 335 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALGEYLEFNPSVIDLILEKAIQA 394
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 395 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDR 454
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F + LRYH+I+I+TD
Sbjct: 455 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDDKNLRYHRIVIMTD 514
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK+L + G IY+ PPLYKVERGK YCY++A+LK
Sbjct: 515 ADVDGAHIRTLLLTFFYRYQKSLVEGGYIYIACPPLYKVERGKNHTYCYNEADLKTTIEG 574
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A ++IQRFKGLGEMMP QLWETT++P RM+K++ I DAAEA+ +F+ LMG +V
Sbjct: 575 FGEKANFTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEIADAAEADRIFTILMGDKVAP 634
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + ++L LDI
Sbjct: 635 RREFIETHSAELDLAQLDI 653
>gi|33241245|ref|NP_876187.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238775|gb|AAQ00840.1| DNA gyrase B subunit [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 658
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/559 (59%), Positives = 427/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G ++Q++ RG P+
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGHIHNQRFERGAPI 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L PV K GT++ F PD +FTT I FD++ ++ R+RELA+LN + I R
Sbjct: 160 GNLRSTKQPVSEKKLTGTKVNFKPDTDIFTTGIVFDYSILSSRLRELAYLNGGVKIVFRD 219
Query: 122 ED---SDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E SD E+ Y E YF+ GG++EYV ++N++K LH +++ + +G+ ++ ALQWC
Sbjct: 220 ERQSVSDKEEKAYEEVYFYEGGIKEYVAYMNSEKDALHPEIIYVNSEKEGVQVEAALQWC 279
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLNS +K KD D +L+GE++REG
Sbjct: 280 IDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFARKRGKRKDGDSNLAGENIREG 339
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L +YLE +P V+D IL K++ A
Sbjct: 340 LTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLAQYLEFNPSVIDLILEKAIQA 399
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL S++LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 400 FNAAEAARRARELVRRKSVLESTTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 459
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI LGLG+KGEDF + LRYH+++I+TD
Sbjct: 460 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITGLGLGIKGEDFSLKNLRYHRVVIMTD 519
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G +Y+ PPLYKVERGK YCY++ +L+K +S
Sbjct: 520 ADVDGAHIRTLLLTFFYRYQKELVEGGYVYIACPPLYKVERGKNHTYCYNEGDLQKTITS 579
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 580 FGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEIEDALEADRIFTILMGDKVAP 639
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 640 RREFIETHSVELDMASLDI 658
>gi|194476918|ref|YP_002049097.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
gi|171191925|gb|ACB42887.1| DNA topoisomerase IV subunit B [Paulinella chromatophora]
Length = 652
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/559 (60%), Positives = 429/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S Y VSGGLHGVG+SVVNALSE LEVTV+R +HQ++ RG P+
Sbjct: 99 VLTVLHAGGKFGGDS--YKVSGGLHGVGVSVVNALSEWLEVTVYRKSQLHHQRFERGVPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
LT ++R GT + F PD ++FTT+I FD++T+AGR+RELA+LN + I+ R
Sbjct: 157 GLLTAQP---GEENRTGTSLTFKPDTKIFTTSITFDYSTLAGRLRELAYLNGGVRISFRD 213
Query: 122 E--DSDPEKN-QYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E S E Y E Y + GG++EYV ++N +K PLH +++ DG+ ++ ALQWC
Sbjct: 214 ERISSGGENGIAYEEVYCYKGGIKEYVAYINKEKDPLHSEIIYVNSHKDGVQVEAALQWC 273
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D YSD++LG+AN+IRT+DGGTHIEG+K LTRTLNS KK KD D +L+GE++REG
Sbjct: 274 VDTYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFAKKRGKRKDSDNNLAGENIREG 333
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E LT+YLE +P V++ IL K++ A
Sbjct: 334 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALTQYLEFNPSVIELILEKAIQA 393
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KS+L SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 394 FNAAEAARRARELVRRKSILESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 453
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F +++LRYH+I+I+TD
Sbjct: 454 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDEKSLRYHRIVIMTD 513
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK+L + G IY+ PPLYKVERGK YCYD+ +L
Sbjct: 514 ADVDGAHIRTLLLTFFYRYQKSLLEGGYIYIACPPLYKVERGKNHTYCYDENDLSTTLKR 573
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F + YSIQRFKGLGEMMP QLW TT++P+ RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 574 FREKSNYSIQRFKGLGEMMPKQLWSTTMDPQSRMMKRVEIEDALEADRIFTILMGDKVAP 633
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +NL LDI
Sbjct: 634 RREFIETHSADLNLAELDI 652
>gi|427703473|ref|YP_007046695.1| DNA gyrase subunit B [Cyanobium gracile PCC 6307]
gi|427346641|gb|AFY29354.1| DNA gyrase, B subunit [Cyanobium gracile PCC 6307]
Length = 652
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 424/559 (75%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVHRQGQVHRQRFERGLPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TL P GT +RF PD ++F+ I+FD++T++ R+RELA+LN + I R
Sbjct: 157 GTLASEDAP---DAHTGTSVRFRPDIEIFSGGIEFDYHTLSARLRELAYLNGGVRIVFRD 213
Query: 122 EDSDPEKNQYNE----YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E + Y + GG++EYV ++N +K PLH +++ DG+ ++ ALQWC
Sbjct: 214 ERAAAAGADGAAHEEIYHYEGGIKEYVAYMNAEKDPLHPEIIYVNATKDGVQVEAALQWC 273
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L+GE++REG
Sbjct: 274 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKDADANLAGENIREG 333
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD +V E L EYLE +P V+D IL K++ A
Sbjct: 334 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDTTVGEALGEYLEFNPQVIDLILEKAIQA 393
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 394 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 453
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF+++ LRYH+I+I+TD
Sbjct: 454 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFEEKNLRYHRIVIMTD 513
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ ELKKV
Sbjct: 514 ADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHNYCYNENELKKVLEG 573
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++PE RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 574 FGEKANYNIQRFKGLGEMMPKQLWETTMDPETRMMKRVEIEDALEADRIFTILMGDKVAP 633
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + ++ LDI
Sbjct: 634 RREFIETHSAELDFAQLDI 652
>gi|88809918|ref|ZP_01125423.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
gi|88786108|gb|EAR17270.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 7805]
Length = 655
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/559 (58%), Positives = 427/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R + Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVDVTVRRQAQVHRQRFERGAPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P + + R GT +RF PD ++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLVSEPQPAEEEGRTGTSVRFKPDIEIFTVGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E N + E YF+ GG++EYV ++N +K LH +++ + DG++++ ALQWC
Sbjct: 217 ERENARDAEGNPHEEIYFYEGGIKEYVAYMNAEKDALHPEIIYVNAEKDGVSVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKESDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPGVIDMILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY+++EL+K
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNESELQKTLEG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYNIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSAELDMAALDI 655
>gi|434386573|ref|YP_007097184.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
gi|428017563|gb|AFY93657.1| DNA gyrase, B subunit [Chamaesiphon minutus PCC 6605]
Length = 645
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/558 (59%), Positives = 429/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG GY+VSGGLHGVG+SVVNALS +EV VWR+ + Q++ +G V
Sbjct: 93 VLTVLHAGGKFG--DGGYTVSGGLHGVGISVVNALSSHVEVKVWRNQKIHTQRFEKGFAV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
+ L V+P ++R GT + F PD ++F + +FD T+A R +ELA+LN + I+
Sbjct: 151 SGL--EVMP-SPENRTGTTVTFQPDPEIFKESTEFDFATLASRFKELAYLNAGIRISFSD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E ++ + Y+F GG+ EYV +LN +K+PLH+ ++ ++ D + +++ALQWC
Sbjct: 208 YRLELLGTDEPKVENYYFEGGIREYVSYLNENKQPLHEEIIYISQEQDKVQVEVALQWCV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTH++G+K LTRT+NS+ +K +K+ D +L GE++REGL
Sbjct: 268 DAYSDNILGFANNIRTIDGGTHLDGLKVVLTRTMNSIARKRNKLKEGDANLGGENIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+SV+VPNPEFEGQTKT+LGN EVRK+VD V E LTEYLE P++ D+IL K++ A
Sbjct: 328 TAIVSVKVPNPEFEGQTKTKLGNTEVRKIVDSIVSEALTEYLEFRPNIADAILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RA++LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 NAAEAARRAKELVRRKSVLESSTLPGKLADCSSKDPSESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGEDFK E LRYH+I ++TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEDFKSEQLRYHRICLMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ++L DEG +Y+ PPLYK+ERG+ YCY + EL++ + F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRSLIDEGYVYIACPPLYKLERGRNHYYCYSERELQQKIAEF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLWETT++ E R LK++ I+DAAEA+ +F+ LMG RV R
Sbjct: 568 PANANYTIQRFKGLGEMMPQQLWETTMDRETRTLKRVEIQDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + L LDI
Sbjct: 628 REFIETYGPKLGLMDLDI 645
>gi|113954544|ref|YP_729329.1| DNA gyrase subunit B [Synechococcus sp. CC9311]
gi|113881895|gb|ABI46853.1| DNA gyrase, B subunit [Synechococcus sp. CC9311]
Length = 655
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/559 (58%), Positives = 426/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P + K GT + F PD Q+FT I+FD++T++ R+RELA+LN + I R
Sbjct: 157 GSLASEPQPAEEKGLTGTSVCFKPDHQIFTVGIEFDYSTLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E E YF+ GG++EYV ++N +K PLH +++ + DG++++ ALQWC
Sbjct: 217 ERQAARDQEGKPREELYFYEGGIKEYVAYMNAEKDPLHPEIIYVNSEKDGVSVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKEADSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGESLSQYLEFNPGVIDMILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+K +
Sbjct: 517 ADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEQQLQKTLAG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYNIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEVQDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSADLDMASLDI 655
>gi|427705874|ref|YP_007048251.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
gi|427358379|gb|AFY41101.1| DNA gyrase subunit B [Nostoc sp. PCC 7107]
Length = 645
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/558 (60%), Positives = 425/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + R GT + F PD Q+FTT I+FD T+AGR+RELA+LN + I
Sbjct: 151 TELVAKPY---KEARTGTSVTFKPDTQIFTTGIEFDFITLAGRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + I++ALQWC+
Sbjct: 208 NRLELLKSDTPKIETYEYRGGIKEYIAYMNRDKQPLHEEIIYVQGERSNVQIEVALQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSIL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLGVKGE+F LRYH+III+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLRYHRIIIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYKVERGK +YCY D EL++ + F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLYKVERGKNHEYCYSDRELQQAIAKF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLW TT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PANANYTIQRFKGLGEMMPAQLWTTTMNPETRTLKQVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +N LDI
Sbjct: 628 REFIETYGSKLNFAELDI 645
>gi|318042881|ref|ZP_07974837.1| DNA gyrase subunit B [Synechococcus sp. CB0101]
Length = 653
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/559 (59%), Positives = 424/559 (75%), Gaps = 9/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G E+ Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVHRQGQEHLQRFERGAPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P R GT + F PD ++FT I+FD++T++ R+RELA+LN + I R
Sbjct: 157 GSLASK--PAADPSRTGTSVCFKPDIEIFTGGIEFDYHTLSARLRELAYLNGGVRIVFRD 214
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E + E + E Y + GG++EYV ++N +K LH D++ + DG+ ++ ALQWC
Sbjct: 215 ERPAARNAEGAAHEEIYHYEGGIKEYVAYMNAEKDALHPDIIYVNSEKDGVQVEAALQWC 274
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD + G+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L+GE++REG
Sbjct: 275 VDAYSDNIFGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKDADANLAGENIREG 334
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+EYLE +P V+D IL K++ A
Sbjct: 335 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEALSEYLEFNPSVIDLILEKAIQA 394
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 395 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDR 454
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F ++ LRYH+I+I+TD
Sbjct: 455 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDEKNLRYHRIVIMTD 514
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +LK+V
Sbjct: 515 ADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHSYCYNEGDLKRVVEG 574
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDAAEA+ +F+ LMG +V
Sbjct: 575 FGEKANYTIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDAAEADRIFTILMGDKVAP 634
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + ++L LDI
Sbjct: 635 RREFIETHSAELDLAQLDI 653
>gi|148238483|ref|YP_001223870.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
gi|147847022|emb|CAK22573.1| DNA gyrase subunit B [Synechococcus sp. WH 7803]
Length = 655
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/559 (58%), Positives = 423/559 (75%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P + R GT + F PD ++F+ I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLASEPQPAEEDGRTGTSVCFKPDIEIFSVGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E N + E YF+ GG++EYV ++N +K LH +++ + DG++++ ALQWC
Sbjct: 217 ERESARDAEGNPHEETYFYEGGIKEYVAYMNAEKDALHPEIIYVNAEKDGVSVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K K+ D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L +YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEALGQYLEFNPGVIDMILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L D G IY+ PPLYKVERGK YCY++ EL+K
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKELVDGGYIYIACPPLYKVERGKNHTYCYNEPELQKTLEG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYNIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSAELDMTALDI 655
>gi|427723858|ref|YP_007071135.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
gi|427355578|gb|AFY38301.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7376]
Length = 640
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/555 (59%), Positives = 426/555 (76%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG GY VSGGLHGVG+SVVNALSE +EVTVWR+ E+ Q+Y RG
Sbjct: 93 VMTVLHAGGKFG--DGGYKVSGGLHGVGVSVVNALSEWVEVTVWRNETEHKQRYERGIAK 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L V + + GT + F PD ++FT FD+NT+AGR+RELA+LN + I
Sbjct: 151 GDL---VTAPATGHKSGTSVHFLPDAEIFTETTVFDYNTLAGRLRELAYLNASVKIIF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
D E+ + N YF+ GG++EYV ++N +K LH+ ++ + + + +++ALQWC DAY
Sbjct: 206 TDHRAEEPRSNTYFYEGGIKEYVAYMNREKTALHEEIIYVSGEKNNVQVEVALQWCIDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+KA LTRT+N++ +K +KD + +L+GE++REGLT +
Sbjct: 266 SDNLLGFANNIRTIDGGTHLEGLKAVLTRTMNTVARKRNKIKDNESNLAGENIREGLTAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD + E L EY E + +V+DSIL K++ A KAA
Sbjct: 326 ISVKVPEPEFEGQTKTKLGNSEVRGIVDSFMGEVLNEYFEFNLNVVDSILEKAIQAFKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCS +SEI++VEGDSAGGSAKQGRDR+FQA
Sbjct: 386 EAARRARELVRRKSVLESSLLPGKLADCSERDAAKSEIYLVEGDSAGGSAKQGRDRQFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRYH+++I+TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDARIYKNNEIQSLITALGLGIKGEEFNPEKLRYHRVVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ++L D+G IY+ PPLYK+ERGK+ YCY D EL+ + P+N
Sbjct: 506 GAHIRTLLLTFFYRYQRSLVDQGYIYIACPPLYKLERGKKHTYCYSDRELQSEIAELPTN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 566 AKYNIQRFKGLGEMMPQQLWDTTMNPESRTLKRVEIEDAAEADRIFTVLMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ A +N+ LDI
Sbjct: 626 IETNAPKLNMLDLDI 640
>gi|428217864|ref|YP_007102329.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
gi|427989646|gb|AFY69901.1| DNA gyrase subunit B [Pseudanabaena sp. PCC 7367]
Length = 646
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/555 (58%), Positives = 422/555 (76%), Gaps = 7/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF G+S Y VSGGLHGVG+SVVNALSE +EV+VWR G + Q+Y RG P+
Sbjct: 98 VMTVLHAGGKFDGNS--YKVSGGLHGVGVSVVNALSEWVEVSVWRQGKLHQQRYERGIPI 155
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L V K ++GT++ F PD +F T I+F+ + + GR+RELA+LN L I +
Sbjct: 156 GNL--EVSTAKDKQKRGTKVCFMPDTMIFATGIEFEFDILVGRLRELAYLNAGLKIEI-- 211
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E ++ Y + GG+ EYV ++ DK+ LH +++ + + + I I++A+QWC D+Y
Sbjct: 212 ADRRGETDKVETYQYDGGIREYVSYMTRDKEALHPEIIYIKGERNDIQIEVAMQWCIDSY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD + G+AN+IRT+DGGTH+EG+K LTRT+NS +K K +KD D +L+GE+VREGLT +
Sbjct: 272 SDNVFGFANNIRTVDGGTHLEGLKTVLTRTINSTARKLKKLKDSDSNLAGENVREGLTAV 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR VD V E L E++E +P V +I+ K+L + AA
Sbjct: 332 ISVKVPEPEFEGQTKTKLGNTEVRGTVDSFVGEVLNEFIEFNPQVASTIIEKALQSYNAA 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESE+FIVEGDSAGGSAKQGRDR FQA
Sbjct: 392 EAARRARELVRRKSVLESSTLPGKLADCSSRDPSESELFIVEGDSAGGSAKQGRDRHFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGK+LN+ER D+ +YKN EIQ LI ++G+G++GE+F LRYHKII+L DADVD
Sbjct: 452 ILPLRGKVLNIERADDNKIYKNAEIQALITSIGMGIRGEEFDFSQLRYHKIILLADADVD 511
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L ++G IY+G PPLYKVERG+ QYCY D EL+++ SSFP N
Sbjct: 512 GAHIRTLLLTFFYRYQRELVEQGNIYIGCPPLYKVERGRSHQYCYSDRELQQILSSFPEN 571
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP+QLWETT+NPE R LKQ+ IEDAAEA +F+ LMG +V R+E
Sbjct: 572 ANYTIQRFKGLGEMMPLQLWETTMNPETRTLKQITIEDAAEAERIFTILMGDKVAPRREF 631
Query: 541 IQNAANLVNLDHLDI 555
I+ +N+ LDI
Sbjct: 632 IETYGPKLNITDLDI 646
>gi|87301672|ref|ZP_01084512.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
gi|87283889|gb|EAQ75843.1| DNA topoisomerase IV subunit B [Synechococcus sp. WH 5701]
Length = 652
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/562 (59%), Positives = 420/562 (74%), Gaps = 16/562 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVRRQGQVHRQRFERGTPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P + GT +RF PD ++F+ I FD+ T++GR+RELA+LN + I R
Sbjct: 157 GSLRSEDDPSGA---TGTAVRFKPDIEIFSGGIDFDYATLSGRLRELAYLNGGVRIVFRD 213
Query: 122 E-------DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLAL 173
E D P + Y+ + GG+ EYV ++N K PLH D++ DG+ ++ AL
Sbjct: 214 EREAAKGSDGSPHEEIYH---YEGGIREYVTYMNAGKDPLHPDIIYVNASKDGVQVEAAL 270
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
QWC DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L+GE++
Sbjct: 271 QWCVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKDTDSNLAGENI 330
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L E+LE HP V+D IL K+
Sbjct: 331 REGLTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSVVGEALGEFLEFHPQVIDLILEKA 390
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQG
Sbjct: 391 IQAFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQG 450
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 413
RDRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI LGLG+KGE+F ALRYH+I+I
Sbjct: 451 RDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITGLGLGIKGEEFNLSALRYHRIVI 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDGAHIRTLLLTFFYRYQKTL + G IY+ PPLYKVERGK YCY++ +LKK
Sbjct: 511 MTDADVDGAHIRTLLLTFFYRYQKTLLEGGYIYIACPPLYKVERGKNHTYCYNEQDLKKT 570
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDAAEA+ +F+ LMG +
Sbjct: 571 LDGFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDAAEADRIFTILMGDK 630
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V R+E I+ + ++ LDI
Sbjct: 631 VAPRREFIETHSAELDFAQLDI 652
>gi|124021870|ref|YP_001016177.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9303]
gi|123962156|gb|ABM76912.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9303]
Length = 655
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/559 (58%), Positives = 425/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGTAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P K R GT + F PD+++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLRSEAQPASEKGRTGTSVCFKPDEEIFTVGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E + E YF+ GG++EYV ++N +K LH +++ + D + ++ ALQWC
Sbjct: 217 ERQPVLDAEGAPHEEVYFYEGGIKEYVTYMNAEKDALHPEIIYVNSEKDNVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K K+ D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPAVIDLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDAKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++A+L+ S
Sbjct: 517 ADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEADLQTTLSG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+ LMG +V
Sbjct: 577 FPEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEVQDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSAELDMAALDI 655
>gi|116074377|ref|ZP_01471639.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
gi|116069682|gb|EAU75434.1| DNA topoisomerase IV subunit B [Synechococcus sp. RS9916]
Length = 655
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/559 (58%), Positives = 424/559 (75%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGKVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P + GT + F PD Q+FT I FD+ T+A R+RELA+LN + I R
Sbjct: 157 GSLRSEEQPAEENGLTGTSVCFKPDIQIFTGGIVFDYATLAARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E PE + E YF+ GG++EYV ++N +K LH D++ + DG+ ++ ALQWC
Sbjct: 217 EREAARTPEGEPHEEIYFYEGGIKEYVAYMNKEKDALHPDIIYVNSEKDGVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
SDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 SDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+ IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVIGLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+K ++
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEQDLQKTLAA 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FPEKANYNIQRFKGLGEMMPAQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ +LDI
Sbjct: 637 RREFIETHSAELDMTNLDI 655
>gi|148241191|ref|YP_001226348.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
gi|147849501|emb|CAK26995.1| DNA gyrase subunit B [Synechococcus sp. RCC307]
Length = 657
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/559 (59%), Positives = 423/559 (75%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q++ RG P+
Sbjct: 104 VLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVHRQDKVHRQRFERGAPI 161
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L K R GT + F PD ++FT I FD+ T++GR+RELA+LN + I R
Sbjct: 162 GSLASEA---GEKGRTGTSVCFKPDIEIFTGGISFDYATLSGRLRELAYLNGGVKIVFRD 218
Query: 122 E--DSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E ++ E Q +E YF+ GG+ EYV ++N +K PLH D++ + DG+ ++ ALQWC
Sbjct: 219 ERPEAAGEDGQPHEEIYFYEGGIREYVNYMNAEKDPLHPDIIYVNSEKDGVQVEAALQWC 278
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K KD D +L+GE++REG
Sbjct: 279 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKDSDGNLAGENIREG 338
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE HP V+D IL K++ A
Sbjct: 339 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDTVVGEALSEYLEFHPQVIDLILEKAIQA 398
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 399 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 458
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R QAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRYH+I+I+TD
Sbjct: 459 RNQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDVSNLRYHRIVIMTD 518
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRYQ+ L + G IY+ PPLYKVERGK YCY++ +LKK
Sbjct: 519 ADVDGAHIRTLILTFFYRYQRELVEGGYIYIACPPLYKVERGKNHTYCYNEQDLKKTLDG 578
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDAA+A+ +F+ LMG +V
Sbjct: 579 FGEKANYTIQRFKGLGEMMPQQLWETTMDPTTRTMKRVEIEDAAQADRIFTILMGDKVAP 638
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +NL LDI
Sbjct: 639 RREFIETHSAELNLADLDI 657
>gi|159904302|ref|YP_001551646.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9211]
gi|159889478|gb|ABX09692.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9211]
Length = 658
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/559 (59%), Positives = 428/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q++ RG PV
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQNQTHVQRFERGVPV 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
LT P K GT + F PD Q+FT+ I+F++ T++ R+RELA+LN + I R
Sbjct: 160 GGLTSKDQPSSQKGVTGTTVCFKPDNQIFTSGIEFEYATLSSRLRELAYLNGGVRIVFRD 219
Query: 122 EDSDP---EKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E E + Y E YF+ GG++EYV ++N++K LH +++ + DG+ ++ ALQWC
Sbjct: 220 ERKTSLTTEGDPYEEIYFYQGGIKEYVSYINSEKDALHPEIIYVNSEKDGVQVEAALQWC 279
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLNS +K KD D +L+GE++REG
Sbjct: 280 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNSFARKRGKRKDGDNNLAGENIREG 339
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 340 LTVVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPSVIDLILEKAIQA 399
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 400 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 459
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLG+KGE+F + LRYH+++I+TD
Sbjct: 460 KFQAILPLRGKILNIEKTDDSKIYKNTEIQSLITALGLGIKGEEFSSKNLRYHRVVIMTD 519
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK+ +YCY++++LKK
Sbjct: 520 ADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKKHKYCYNESDLKKTIDG 579
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 580 FGEKANYTIQRFKGLGEMMPKQLWETTMDPSTRMMKKVEIEDALEADRIFTILMGDKVAP 639
Query: 537 RKELIQNAANLVNLDHLDI 555
R++ I+ + ++L LDI
Sbjct: 640 RRQFIETHSVELDLASLDI 658
>gi|352095354|ref|ZP_08956457.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
gi|351679365|gb|EHA62507.1| DNA gyrase, B subunit [Synechococcus sp. WH 8016]
Length = 655
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/559 (58%), Positives = 425/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P + K GT + F PD ++FT I+FD++T++ R+RELA+LN + I R
Sbjct: 157 GSLVSEPQPAEEKGVTGTSVCFKPDHEIFTVGIEFDYSTLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E E YF+ GG++EYV ++N +K PLH +++ + DG++++ ALQWC
Sbjct: 217 ERQAARDSEGQPREELYFYEGGIKEYVAYMNAEKDPLHPEIIYVNSEKDGVSVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFAKKRGKRKDSDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGESLSQYLEFNPGVIDMILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCS+ P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSTRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+ +
Sbjct: 517 ADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEQQLQTTLAG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYNIQRFKGLGEMMPKQLWETTMDPSTRMMKRVEVQDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSADLDMASLDI 655
>gi|87123248|ref|ZP_01079099.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
gi|86168968|gb|EAQ70224.1| DNA gyrase, B subunit [Synechococcus sp. RS9917]
Length = 705
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/549 (59%), Positives = 421/549 (76%), Gaps = 7/549 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG P+
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L PV+ K R GT + F PD ++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLASAPQPVEEKGRTGTSVCFKPDLEIFTGGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E + E + + E YF+ GG++EYV ++N +K PLH +++ + DG+ ++ ALQWC
Sbjct: 217 ERESALNAEGDAHEEVYFYEGGIKEYVAYMNAEKDPLHPEIIYVNAEKDGVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKESDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPSVIDMILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDARIYKNTEIQALITALGLGIKGEDFDAKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+ +
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKELVEGGFIYIACPPLYKVERGKNHTYCYNEQDLQTTLAG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R++K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYNIQRFKGLGEMMPKQLWETTMDPTTRLMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAA 545
R+E I+ A
Sbjct: 637 RREFIETTA 645
>gi|33862394|ref|NP_893954.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9313]
gi|33640507|emb|CAE20296.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9313]
Length = 655
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/559 (58%), Positives = 424/559 (75%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGTAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P K R GT + F PD+++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLRSEAQPASEKGRTGTSVCFKPDEEIFTVGIVFDYATLSTRLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E + E YF+ GG++EYV ++N +K LH +++ + D + ++ ALQWC
Sbjct: 217 ERQPVLDAEGAPHEEVYFYEGGIKEYVTYMNAEKDALHPEIIYVNSEKDNVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ +K K+ D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNTFARKRGKRKEADSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V E L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEALSQYLEFNPAVIDLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDSKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+ S
Sbjct: 517 ADVDGAHIRTLILTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEVDLQTTLSG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP A Y+IQRFKGLGEMMP QLWETT++P RM+K++ ++DA EA+ +F+ LMG +V
Sbjct: 577 FPEKANYTIQRFKGLGEMMPKQLWETTMDPSARMMKRVEVQDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSAELDMAALDI 655
>gi|17232757|ref|NP_489305.1| DNA gyrase subunit B [Nostoc sp. PCC 7120]
gi|17134404|dbj|BAB76964.1| DNA gyrase B subunit [Nostoc sp. PCC 7120]
Length = 645
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/558 (59%), Positives = 428/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + + R GT + F PD Q+FT +I+FD+ T++GR+RELA+LN + I
Sbjct: 151 TELITNPY---KEARTGTSVTFKPDTQIFTNSIEFDYITLSGRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + + I+++LQWC+
Sbjct: 208 NRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNVQIEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKEHEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSIL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADSILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLGVKGE+F LRYH+III+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLRYHRIIIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYRYQ+ L ++G IY+ PPLYKVERG+ +YCY + EL++ + F
Sbjct: 508 DVDGAHIRTLILTFFYRYQRALIEQGFIYIACPPLYKVERGRNYEYCYSERELQQAIAKF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLW TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PANANYTIQRFKGLGEMMPEQLWTTTMNPETRTLKRVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSKLNLTDLDI 645
>gi|123967056|ref|YP_001012137.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9515]
gi|123201422|gb|ABM73030.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9515]
Length = 655
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/558 (57%), Positives = 421/558 (75%), Gaps = 8/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+R+G E+ Q++ RG +
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVFREGSEFTQRFERG--I 157
Query: 62 TTLTCHVLPVDSKD-RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T +K R+GT I F PD +FT I+FD+ ++ R+RELA+LN + I
Sbjct: 158 TKGELKTQKQQNKSLRKGTIICFKPDTTIFTDGIEFDYALLSSRLRELAYLNGGVKIIFI 217
Query: 121 KEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E + E Y + GG++EYVQ++N +K+ +H +++ D + ++ ALQWCS
Sbjct: 218 DERQKLPDGSFKEEIYLYDGGIKEYVQYINKEKESIHSEIIYVDSQKDNVYVEAALQWCS 277
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D YSD +LG+AN+IRTIDGGTHIEG+K LTRT N++ KK K+ D +LSGE++REGL
Sbjct: 278 DVYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGL 337
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P+V D IL K++ +
Sbjct: 338 TVVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGESLTKYMEFNPNVFDLILEKAIQSF 397
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AAKRARDLVR+KSVL SS+LPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR+
Sbjct: 398 NAAEAAKRARDLVRRKSVLESSTLPGKLADCSSRDPSGSEIYIVEGDSAGGSAKQGRDRK 457
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDA
Sbjct: 458 FQAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVNSLRYHRVVIMTDA 517
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK +YCY++ +LKK F
Sbjct: 518 DVDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHKYCYNEGQLKKTIEDF 577
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
A Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDA EA+ +F+ LMG +V R
Sbjct: 578 GEKANYNIQRFKGLGEMMPKQLWDTTMNPETRMMKKVEIEDALEADRIFNILMGDKVAPR 637
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +++ LDI
Sbjct: 638 REFIETHSANLDIATLDI 655
>gi|427729923|ref|YP_007076160.1| DNA gyrase subunit B [Nostoc sp. PCC 7524]
gi|427365842|gb|AFY48563.1| DNA gyrase, B subunit [Nostoc sp. PCC 7524]
Length = 645
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/558 (59%), Positives = 427/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHTQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + R GT + F PD Q+FTT +FD+ T+A R+RELA+LN + I
Sbjct: 151 TELIAKPY---KEARTGTSVTFKPDVQIFTTGTEFDYLTLANRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E E + Y + GG+ EY+ ++N +K+PLH+ ++ + + + + +++ALQWC+
Sbjct: 208 NRLELLKSETPKVEVYEYKGGIREYIAYMNREKQPLHEEIIYVQGERNNVQVEVALQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ D +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKLKENDSNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DS+L K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPSIADSVLDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D++ +YKN E+Q LI ALGLGVKGE+F LRYH+I+I+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDSKIYKNNEVQALITALGLGVKGEEFDSSQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYKVERG+ +YCY D EL+++ + F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLYKVERGRNHEYCYSDRELQEILAKF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLW+TT+NP+ R LKQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PANANYTIQRFKGLGEMMPGQLWDTTMNPQTRTLKQVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSKLNLVDLDI 645
>gi|254430578|ref|ZP_05044281.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
gi|197625031|gb|EDY37590.1| DNA gyrase, B subunit [Cyanobium sp. PCC 7001]
Length = 652
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/560 (58%), Positives = 422/560 (75%), Gaps = 12/560 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE ++VTV+R + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGVSVVNALSEWVQVTVYRHDQVHTQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L K R GT + F PD ++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLAS---APGEKGRTGTTVCFKPDSEIFTGGISFDYATLSSRLRELAYLNGGVRIVFRD 213
Query: 122 EDSDPEKNQYNE-----YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQW 175
E +N E YF+ GG++EYV ++N +K PLH D++ + +G+ ++ ALQW
Sbjct: 214 ERQSA-RNAAGEPHEDIYFYEGGIKEYVAYMNAEKDPLHPDIIYVNAEKEGVQVEAALQW 272
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
C DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L+GE++RE
Sbjct: 273 CVDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKRGKRKDADANLAGENIRE 332
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L E+LE +P V+D IL K++
Sbjct: 333 GLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDTLVGEALGEFLEFNPSVIDLILEKAIQ 392
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRD
Sbjct: 393 AFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRD 452
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF ++ LRYH+I+I+T
Sbjct: 453 RRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDEKNLRYHRIVIMT 512
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTL+LTFF+RYQK L + G IY+ PPLYKVERGK YCY++ +LKK
Sbjct: 513 DADVDGAHIRTLILTFFFRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNEGDLKKTIE 572
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
SF A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 573 SFGEKANYTIQRFKGLGEMMPQQLWETTMDPATRMMKRVEIEDALEADRIFTILMGDKVA 632
Query: 536 TRKELIQNAANLVNLDHLDI 555
R+E I+ + ++L LDI
Sbjct: 633 PRREFIETHSAELDLAQLDI 652
>gi|427718008|ref|YP_007066002.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
gi|427350444|gb|AFY33168.1| DNA gyrase subunit B [Calothrix sp. PCC 7507]
Length = 645
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/558 (59%), Positives = 429/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDKKVHLQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + R GT F PD Q+F+T I+FD+ T++GR+RELA+LN + I
Sbjct: 151 TELQAKPY---KEARTGTSTTFKPDTQIFSTGIEFDYITLSGRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N +K+PLH+ ++ + + + + I+++LQWC+
Sbjct: 208 HRLELLKSDTAKVETYEYRGGIKEYIAYMNREKQPLHEEIIYVQGERNNVQIEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V DSIL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGVADSILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKGE+F LRYH+I+I+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDSTQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+KVERG+ +YCY + EL++ ++F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALIEQGFIYIACPPLFKVERGRNHEYCYSERELQQHIATF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
PSNA Y+IQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PSNANYNIQRFKGLGEMMPAQLWDTTMNPESRKMKQVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSKLNLTDLDI 645
>gi|354567214|ref|ZP_08986384.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
gi|353543515|gb|EHC12973.1| DNA gyrase, B subunit [Fischerella sp. JSC-11]
Length = 645
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/558 (60%), Positives = 423/558 (75%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L ++ R GT + F PD Q+FTT +FD T+A R+RELA+LN + I
Sbjct: 151 TEL---IVKPYKDHRTGTSVSFLPDSQIFTTGTEFDFTTLASRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R + ++ + Y + GG+ EY+ ++N DK+PLH+ V+ + + + + +++ALQWC+
Sbjct: 208 HRLQLLKSDQPKVETYEYKGGIREYITYINADKQPLHEEVIYVQGERNNVQVEVALQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LSGEHVREGL
Sbjct: 268 DAYTDNILGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKLKDSEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D+IL K++ A
Sbjct: 328 TGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGETLTEYLEFHPSVADAILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI++VEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPRESEIYLVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLGVKGE+F LRYH+I+I+TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGVKGEEFDASQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L ++G +Y+ PPLYK+ERGK +YCY D E + S
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALIEQGYVYIACPPLYKIERGKNYKYCYSDREKDQYISQL 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P NA Y+IQRFKGLGEMMP QLW TT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PENANYTIQRFKGLGEMMPEQLWSTTMNPETRTLKQVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSKLNLKDLDI 645
>gi|443477130|ref|ZP_21066998.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
gi|443017788|gb|ELS32155.1| DNA gyrase subunit B [Pseudanabaena biceps PCC 7429]
Length = 646
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/555 (58%), Positives = 420/555 (75%), Gaps = 6/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG GY VSGGLHGVG+SVVNALSE +EV+VWR Y Q+Y RG PV
Sbjct: 97 VLTVLHAGGKFG--DGGYKVSGGLHGVGISVVNALSEWVEVSVWRLEKVYKQRYERGFPV 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L + R+GT++RF PD Q+FTT +F+++ +A R++ELA+LN + I
Sbjct: 155 TELIASK-SEEPIQRRGTQVRFKPDAQIFTTQTEFEYDILASRLKELAYLNAGVKIEF-- 211
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D + + + Y + GG+ EYV ++ +K+ +H D++ + D + +++ALQWC D+Y
Sbjct: 212 SDRRGTEVRTDIYCYEGGIREYVAYMTREKEAIHPDIIYVNGERDNVVVEVALQWCIDSY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+D +LG+AN+IRTIDGGTH+EG+K LTRT+N+ ++ K +K+ + +L+GE+VREGLT +
Sbjct: 272 NDNVLGFANNIRTIDGGTHLEGLKTVLTRTINATARRLKKIKEGESNLAGENVREGLTAV 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+V +PEFEGQTKT+LGN EVR +VD V E L EYLE HP V SI+ K+L A AA
Sbjct: 332 ISVKVTDPEFEGQTKTKLGNTEVRGIVDSFVGEVLNEYLEFHPAVATSIIEKALQAFNAA 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KS L SS+LPGKLADCSS P+ESEIFIVEGDSAGGSAKQGRDR +QA
Sbjct: 392 EAARRARELVRRKSALESSTLPGKLADCSSRDPKESEIFIVEGDSAGGSAKQGRDRHYQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGK+LN+ER D++ +YKN EIQ LI GLG+KGEDF + LRYHKII+L DADVD
Sbjct: 452 ILPLRGKVLNIERADDSKIYKNNEIQALITGCGLGIKGEDFNESQLRYHKIILLADADVD 511
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D G IY+G PPLYKVERGK QYCY D +L+ + SFP+N
Sbjct: 512 GAHIRTLLLTFFYRYQRELLDRGYIYIGCPPLYKVERGKNAQYCYTDRDLQALLESFPAN 571
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLWETT+NP R LK+L IEDAAEA+ +F+ LMG +V R+E
Sbjct: 572 ANYNIQRFKGLGEMMPQQLWETTMNPATRSLKRLTIEDAAEADRIFTILMGDKVAPRREF 631
Query: 541 IQNAANLVNLDHLDI 555
I+ + + + LDI
Sbjct: 632 IETYGSKLAITELDI 646
>gi|72383051|ref|YP_292406.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
gi|72002901|gb|AAZ58703.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL2A]
Length = 655
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/559 (58%), Positives = 426/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVRRQQQVHFQRFERGASI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR- 120
+L L K+ GT + F PD Q+FT I F++ ++ R+RELA+LN + I R
Sbjct: 157 GSLKSENLSKSDKNLTGTTVCFKPDDQIFTDGISFEYGILSSRLRELAYLNGGVRIVFRD 216
Query: 121 --KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
K+ +D + Y E YF+ GG++EYV+++ K LH +++ + DG+ ++ A+QWC
Sbjct: 217 ERKQSNDSSQTPYEEVYFYEGGIKEYVEYMTKAKDSLHPEIIYVNSEKDGVQVEAAMQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRTIDGGTHIEG+K LTRTLNS KK KD D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTIDGGTHIEGLKTVLTRTLNSFAKKRGKRKDGDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V L++YLE +P V+D IL K++ A
Sbjct: 337 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGTALSQYLEFNPGVIDLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKILN+E+ D+A MYKN EIQ+LI ALGLG+KGEDF+ + LRYH+++I+TD
Sbjct: 457 KFQAILPLRGKILNIEKTDDAKMYKNTEIQSLITALGLGIKGEDFEVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKV RGK +YCY++++++K +S
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKDLVEGGYIYIACPPLYKVTRGKNHKYCYNESDMQKTLAS 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRMMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + ++L LDI
Sbjct: 637 RREFIETHSVDLDLATLDI 655
>gi|56751624|ref|YP_172325.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
gi|81301300|ref|YP_401508.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|25019687|gb|AAN71773.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
gi|56686583|dbj|BAD79805.1| DNA gyrase B subunit [Synechococcus elongatus PCC 6301]
gi|81170181|gb|ABB58521.1| DNA gyrase subunit B [Synechococcus elongatus PCC 7942]
Length = 645
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/558 (59%), Positives = 428/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+G + Q++ +G P+
Sbjct: 93 VLTILHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQGNPI 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L V P D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN + I
Sbjct: 151 GEL--QVAP-DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRIDFTD 207
Query: 122 EDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E KN Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ ++ ALQWC
Sbjct: 208 ERLQLTKNHEPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQWCV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LSGE++REGL
Sbjct: 268 DAYSDNILGFANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+SV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D IL K++ A
Sbjct: 328 TAIVSVKVPDPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRYH+I+I+TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYK+ERG+ YCY++ EL++ ++F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRSLLEQGYIYIACPPLYKLERGRNHYYCYNERELQERIATF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P NA Y+IQRFKGLGEMMP QLWETT++PE R +K++ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PENANYTIQRFKGLGEMMPQQLWETTMDPETRTMKRVEIEDAAEADRIFTILMGDRVQPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ +++ LDI
Sbjct: 628 REFIETYGPQLSMAALDI 645
>gi|186686392|ref|YP_001869588.1| DNA gyrase subunit B [Nostoc punctiforme PCC 73102]
gi|186468844|gb|ACC84645.1| DNA gyrase, B subunit [Nostoc punctiforme PCC 73102]
Length = 645
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/562 (59%), Positives = 431/562 (76%), Gaps = 17/562 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHLQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA--- 118
T L + R GT + F PD Q+FTT+I+FD+ T++GR+RELA+LN + I
Sbjct: 151 TELQTKPY---KEARTGTSVTFKPDTQIFTTSIEFDYITLSGRLRELAYLNAGVKITFTD 207
Query: 119 ----LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLAL 173
L K D+ P+ YN + GG++EY+ ++N +K+PLH+ ++ + + + + ++++L
Sbjct: 208 NRLELLKSDT-PKVESYN---YKGGIKEYIAYMNREKQPLHEEIIYVQGERNNVQVEVSL 263
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
QWC+DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHV
Sbjct: 264 QWCTDAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHV 323
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + DSIL K+
Sbjct: 324 REGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPAIADSILDKA 383
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQG
Sbjct: 384 IQAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQG 443
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIII 413
RDRR QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKG++F LRYH+I+I
Sbjct: 444 RDRRTQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGDEFDSNQLRYHRIVI 503
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPL+KVERG+ +YCY D E +
Sbjct: 504 MTDADVDGAHIRTLLLTFFYRYQRSLIEQGFIYIACPPLFKVERGRNHEYCYSDREKNQA 563
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG R
Sbjct: 564 IAKFPANANYTIQRFKGLGEMMPQQLWDTTMNPETRKMKQVEIEDAAEADRIFTILMGDR 623
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V R+E I+ + +N LDI
Sbjct: 624 VAPRREFIETYGSKLNFTDLDI 645
>gi|33864631|ref|NP_896190.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
gi|33632154|emb|CAE06610.1| DNA gyrase subunit B [Synechococcus sp. WH 8102]
Length = 655
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/560 (58%), Positives = 422/560 (75%), Gaps = 9/560 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P GT + F PD ++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLASEDQPASEAGETGTTVCFKPDIEIFTGGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDSDPEKNQYNE-----YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQW 175
E + +N+ E YF+ GG++EYV ++NT+K LH D++ + DG+ ++ ALQW
Sbjct: 217 E-RESARNEVGEAHEETYFYEGGIKEYVAYMNTEKDALHPDIIYVNSEKDGVQVEAALQW 275
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
CSDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++RE
Sbjct: 276 CSDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIRE 335
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+ IL K++
Sbjct: 336 GLTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEGLSQFLEFNPSVIGLILEKAIQ 395
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRD
Sbjct: 396 AFNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRD 455
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+T
Sbjct: 456 RRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMT 515
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+K
Sbjct: 516 DADVDGAHIRTLLLTFFYRYQKALVEGGYIYIACPPLYKVERGKNHTYCYNEGDLQKTLQ 575
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
SF A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+ LMG +V
Sbjct: 576 SFGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVA 635
Query: 536 TRKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 636 PRREFIETHSAELDMTALDI 655
>gi|33862190|ref|NP_893751.1| DNA gyrase subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634408|emb|CAE20093.1| DNA gyrase, subunit B [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 655
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/557 (57%), Positives = 419/557 (75%), Gaps = 6/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV RDG E++Q++ +G
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVHVTVSRDGYEFNQRFEKGIAK 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L R+GT I F PD +FT I+FD+ ++ R+RELA+LN + I R
Sbjct: 160 GELKSQKQQ-KKPFRKGTTICFKPDTSIFTDGIKFDYALLSSRLRELAYLNGGVKIIFRD 218
Query: 122 EDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + + E Y + GG++EYV+++N +K+ +H +V+ D + ++ ALQWCSD
Sbjct: 219 ERQNLSDGSFKEEIYLYDGGIKEYVEYINKEKESIHSEVIYVDSQKDNVYVEAALQWCSD 278
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YSD +LG+AN+IRTIDGGTHI+G+K LTRT N++ KK K+ D +LSGE++REGLT
Sbjct: 279 VYSDNILGFANNIRTIDGGTHIDGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGLT 338
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV+VP PEFEGQTKT+LGN EVR +VD + E L +Y+E +P+V D IL K++ +
Sbjct: 339 VVLSVKVPEPEFEGQTKTKLGNTEVRGIVDSLIGESLIKYMEFNPNVFDLILEKAIQSFN 398
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AAKRARDLVR+KSVL SS+LPGKLADCSS P +EI+IVEGDSAGGSAKQGRDRRF
Sbjct: 399 AAEAAKRARDLVRRKSVLESSTLPGKLADCSSRDPSGAEIYIVEGDSAGGSAKQGRDRRF 458
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDAD
Sbjct: 459 QAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEEFNVNSLRYHRVVIMTDAD 518
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK +YCY++ +LK+ F
Sbjct: 519 VDGAHIRTLLLTFFYRYQRDLVEKGFIYIACPPLYKVERGKNHKYCYNENQLKQTIEDFG 578
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
A Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+
Sbjct: 579 EKANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRR 638
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ + +++ LDI
Sbjct: 639 EFIETHSANLDMATLDI 655
>gi|119512311|ref|ZP_01631397.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
gi|119463024|gb|EAW43975.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414]
Length = 645
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/558 (59%), Positives = 426/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVGLSVVNALS+ LEVTVWRD + Q+Y RG PV
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGLSVVNALSDVLEVTVWRDNKVHVQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L D + + GT I F PD Q+F +++FD+ TIAGR+RELA+LN + I
Sbjct: 151 TELQAKP---DKEGKTGTSINFKPDSQIFINSVEFDYITIAGRLRELAYLNAGVKIIFGD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + ++++LQWC+
Sbjct: 208 HRLELLKSDTPRIETYEYKGGIKEYIAYMNRDKQPLHEEIIYVHGERNNVQVEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNAIARKRNKIKENESNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE HP + DSIL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFHPGIADSILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKG++F LRYH+I+I+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGDEFDSTQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+KVERGK +YCY + EL++ +
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALIEQGFIYIACPPLFKVERGKNHEYCYSERELQQYLGTL 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
PSNA Y+IQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PSNANYNIQRFKGLGEMMPQQLWDTTMNPESRKMKQVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +N LDI
Sbjct: 628 REFIETYGSKLNFTDLDI 645
>gi|78183717|ref|YP_376151.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
gi|78168011|gb|ABB25108.1| DNA gyrase subunit B [Synechococcus sp. CC9902]
Length = 655
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/559 (57%), Positives = 422/559 (75%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TL P + GT + F PD Q+FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GTLLSESQPEAEQGETGTTVCFLPDTQIFTGGIVFDYATLSARLRELAYLNGGVQIVFRD 216
Query: 122 ED----SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E SD YF+ GG++EYV ++N K LH D++ + DG+ ++ ALQWC
Sbjct: 217 ERESSLSDAGDPHEEIYFYEGGIKEYVAYMNKAKDALHPDIIYVNSEKDGVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 ADAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKEADSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+ IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGESLSQFLEFNPSVISLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLG+KGE+F +++LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDQKSLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRY++ L + G IY+ PPLYKVERGK YCY++++L+K
Sbjct: 517 ADVDGAHIRTLILTFFYRYKRELVEGGYIYIACPPLYKVERGKNHTYCYNESDLQKTLKG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGENAKYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRIEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSKELDMAALDI 655
>gi|428303880|ref|YP_007140705.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
gi|428245415|gb|AFZ11195.1| DNA gyrase subunit B [Crinalium epipsammum PCC 9333]
Length = 646
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/559 (59%), Positives = 430/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E++Q++ RG P+
Sbjct: 93 VMTILHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKEHNQRFERGIPI 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L P+ ++R GT I F PD ++FT +I+FD+ TI+GR+RELA+LN + I
Sbjct: 151 GELKAQ--PI-KENRTGTSICFKPDTEIFTVSIEFDYTTISGRLRELAYLNAGVKITFSD 207
Query: 122 EDSDPEKN---QYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+ KN + Y + GG+ EY+ ++NT+K+PLH+ V+ + + + + +++ALQWC
Sbjct: 208 QRIHLLKNNEPKVETYCYEGGIREYITYMNTEKQPLHEEVIYIQGERNNVQVEVALQWCV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N+ +K +K+ D +L GE++REGL
Sbjct: 268 DAYSDNLLGFANNIRTIDGGTHLEGLKAVLTRTMNTTARKRNKLKEADSNLGGENIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E TEYL+ HP+V D+IL K++ A
Sbjct: 328 TGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEIFTEYLDFHPNVADAILEKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS LPGKLADCS+ P ESEI+IVEGDSAGGSAKQGRDRR
Sbjct: 388 NAAEAARRARELVRRKSVLESSPLPGKLADCSTKDPTESEIYIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYH+I+I+TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDSTQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS- 476
DVDGAHIRTLLLTFFYRYQ+ L DEG IY+ PPLYKVERG+ YCY + EL K+ ++
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALVDEGYIYIACPPLYKVERGRNHYYCYSERELTKLTTTE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FPSNA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPSNANYTIQRFKGLGEMMPTQLWDTTMNPESRTLKRVEIEDAAEADRIFTVLMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +NL LDI
Sbjct: 628 RREFIETYGSRLNLVDLDI 646
>gi|75908731|ref|YP_323027.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
gi|75702456|gb|ABA22132.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413]
Length = 645
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/558 (59%), Positives = 426/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEVVEVTVWRDKKVHIQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + R GT + F PD Q+FT +I+FD+ T++ R+RELA+LN + I
Sbjct: 151 TELIAKPY---KEARTGTSVSFKPDSQIFTNSIEFDYITLSSRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N DK+PLH+ ++ + + + + I+++LQWC+
Sbjct: 208 NRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERNNVQIEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNTIARKRNKIKENEANLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + D+IL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFHPGIADAILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLGVKGE+F LRYH+III+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDSKIYKNNEIQALITALGLGVKGEEFDSTQLRYHRIIIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYRYQ+ L ++G IY+ PPLYKVERG+ +YCY + +L++ + F
Sbjct: 508 DVDGAHIRTLILTFFYRYQRALIEQGFIYIACPPLYKVERGRNYEYCYSERDLQQAIAKF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLW TT+NPE R LK++ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PANANYTIQRFKGLGEMMPEQLWTTTMNPETRTLKRVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSKLNLTDLDI 645
>gi|428309704|ref|YP_007120681.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
gi|428251316|gb|AFZ17275.1| DNA gyrase subunit B [Microcoleus sp. PCC 7113]
Length = 642
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/557 (60%), Positives = 429/557 (77%), Gaps = 10/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRENRIHTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + + R GT + F PD Q+F TT I+FD+ T+AGR+RELA+LN + I
Sbjct: 151 TEL---IGKPSKEARTGTSVSFKPDTQIFVTTGIEFDYTTLAGRVRELAYLNAGVRITF- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D+ E+ + Y++ GG++EYV ++N +K+PLH +++ + + +G +++ALQWC DA
Sbjct: 207 -TDNRLEQPRQETYYYEGGIQEYVAYMNREKEPLHQEIIYIQGERNGTQVEVALQWCVDA 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N++ +K +K+ + +L GE+VREGLT
Sbjct: 266 YSDNLLGFANNIRTIDGGTHLEGLKAVLTRTMNAIARKRNKIKEGEPNLGGENVREGLTG 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP+PEFEGQTKT+LGN EVR +V+ V E LTEYLE P+V D++L K++ A KA
Sbjct: 326 VISVKVPDPEFEGQTKTKLGNTEVRGIVESLVGEVLTEYLEFRPNVADAVLDKAIQAFKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
A AA+RARDLVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDR+FQ
Sbjct: 386 AEAARRARDLVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRQFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KG++F LRYH+I+I+TDADV
Sbjct: 446 AILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGDEFDPSQLRYHRIVIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFP 478
DGAHIRTLLLTFFYRYQ++L D+G IY+ PPLYKVERG+ YCY D EL ++ FP
Sbjct: 506 DGAHIRTLLLTFFYRYQRSLVDQGYIYIACPPLYKVERGRNHYYCYSDRELNNLIQHEFP 565
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
SNA Y+IQRFKGLGEMMP QLWETT+NP R LK++ IEDAAEA+ VF+ LMG RV R+
Sbjct: 566 SNASYTIQRFKGLGEMMPTQLWETTMNPGTRTLKRVEIEDAAEADRVFTVLMGDRVGPRR 625
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ + +NL LDI
Sbjct: 626 EFIETYGSRLNLTDLDI 642
>gi|124026793|ref|YP_001015908.1| DNA gyrase subunit B [Prochlorococcus marinus str. NATL1A]
gi|123961861|gb|ABM76644.1| DNA gyrase, subunit B [Prochlorococcus marinus str. NATL1A]
Length = 655
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/559 (58%), Positives = 427/559 (76%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE +EVTV R + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVEVTVRRQQQVHFQRFERGASI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR- 120
+L L K+ GT + F PD Q+FT I F++ ++ R+RELA+LN + I R
Sbjct: 157 GSLKSENLSKSDKNLTGTTVCFKPDDQIFTDGISFEYGILSSRLRELAYLNGGVRIVFRD 216
Query: 121 --KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
K+ +D + + E YF+ GG++EYV+++ K LH +++ + DG+ ++ A+QWC
Sbjct: 217 ERKQSNDSSQTPHEEVYFYEGGIKEYVEYMTKAKDSLHPEIIYVNSEKDGVQVEAAMQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD++LG+AN+IRTIDGGTHIEG+K LTRTLNS KK KD D +L+GE++REG
Sbjct: 277 VDAYSDSILGFANNIRTIDGGTHIEGLKTVLTRTLNSFAKKRGKRKDGDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP+PEFEGQTKT+LGN EVR +VD V L++YLE +P+V+D IL K++ A
Sbjct: 337 LTAVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGTSLSQYLEFNPNVIDLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKILN+E+ D+A MYKN EIQ+LI ALGLG+KGEDF+ + LRYH+++I+TD
Sbjct: 457 KFQAILPLRGKILNIEKTDDAKMYKNTEIQSLITALGLGIKGEDFEVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKV RGK +YCY++++++K +S
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKDLVEGGYIYIACPPLYKVTRGKNHKYCYNESDMQKTLAS 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLW+TT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYTIQRFKGLGEMMPKQLWDTTMDPTTRMMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + ++L LDI
Sbjct: 637 RREFIETHSVDLDLATLDI 655
>gi|443321835|ref|ZP_21050875.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
gi|442788451|gb|ELR98144.1| DNA gyrase, B subunit [Gloeocapsa sp. PCC 73106]
Length = 640
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/555 (58%), Positives = 427/555 (76%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREKKVHTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L P +++QGT + F PD ++F+ +FD+NT+AGR++ELA+LN + I
Sbjct: 151 TELISEPHP---ENQQGTSVSFLPDAEIFSETREFDYNTLAGRLKELAYLNAGVKITFSD 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
PE+ + Y + GG+ EYV ++ +K+PLH D++ + + + +++ALQWC DAY
Sbjct: 208 RRQTPERVE--AYCYEGGIREYVTYMTREKEPLHKDIIYVSGERNDVQVEVALQWCVDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +L+GE+VREGLT +
Sbjct: 266 SDNLLGFANNIRTIDGGTHLEGLKTVLTRTINTVARKRNKIKENEANLAGENVREGLTGV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VP+PEFEGQTKT+LGN EVR +VD V E L+EYLE +P V DS++ K++ A KAA
Sbjct: 326 VSVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFNPHVADSVIDKAIQAFKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEIF+VEGDSAGGSAKQGRDRRFQA
Sbjct: 386 EAARNARELVRRKSVLESSPLPGKLADCSTRDPAESEIFLVEGDSAGGSAKQGRDRRFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLG+KGE+F ALRYH+I+I+TDADVD
Sbjct: 446 ILPLRGKILNIEKTDDSKIYKNNEIQSLITALGLGIKGEEFDASALRYHRIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYK+ERG+ YCY D EL++ ++FP N
Sbjct: 506 GAHIRTLLLTFFYRYQRDLVDQGYIYIACPPLYKIERGRNHYYCYSDRELQQQLATFPPN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 566 ASYNIQRFKGLGEMMPAQLWETTMNPESRTLKRIEIEDAAEADRIFTVLMGDRVAPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ + +NL LDI
Sbjct: 626 IETHGSRLNLVDLDI 640
>gi|78211642|ref|YP_380421.1| DNA gyrase subunit B [Synechococcus sp. CC9605]
gi|78196101|gb|ABB33866.1| DNA gyrase, B subunit [Synechococcus sp. CC9605]
Length = 655
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/559 (58%), Positives = 419/559 (74%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L P GT + F PD ++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GVLASESQPAAESGETGTTVCFKPDLEIFTGGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E N + E YF+ GG++EYV ++N +K LH D++ + DG+ ++ ALQWC
Sbjct: 217 ERESARDGEGNPHEETYFYEGGIKEYVAYMNKEKDALHPDIIYVNSEKDGVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
SDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 SDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+ IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVIGLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+K
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEGDLQKTLEG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSAELDMAALDI 655
>gi|411117920|ref|ZP_11390301.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
gi|410711644|gb|EKQ69150.1| DNA gyrase subunit B [Oscillatoriales cyanobacterium JSC-12]
Length = 645
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/541 (60%), Positives = 414/541 (76%), Gaps = 8/541 (1%)
Query: 19 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 78
Y VSGGLHGVG+SVVNALSE +EVTVWRDG + Q++ RG P + + DR G
Sbjct: 109 YKVSGGLHGVGISVVNALSEWVEVTVWRDGKIHTQRFERGIPKGDMQVES---GAGDRTG 165
Query: 79 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYF 135
T + F PD +FT I FD+ T+AGR+RELAFLN + I R++ + + + YF
Sbjct: 166 TSVTFLPDSTIFTGGIVFDYATLAGRLRELAFLNGGVRITFTDNRRDSPESGEPRTETYF 225
Query: 136 FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 194
+ GG+ EYV ++N +K+PLH+ ++ + + + + +++ALQW +DAY+D +LG+AN+IRTI
Sbjct: 226 YEGGIREYVTYMNREKQPLHEEIIYIQGERNNVQVEVALQWSADAYTDNLLGFANNIRTI 285
Query: 195 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 254
DGGTH+EG+K LTRTLNSL +K +KD D L+GE++REGLT +ISV+VP+PEFEGQT
Sbjct: 286 DGGTHLEGLKTVLTRTLNSLARKRNKLKDDD-KLAGENIREGLTGVISVKVPDPEFEGQT 344
Query: 255 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 314
KT+LGN EVR +VD V E LTEYLE P V D+I+ K+L A +AA AA++AR+LVR+KS
Sbjct: 345 KTKLGNTEVRGIVDSLVGEVLTEYLEFRPSVADAIIEKALEAFRAAEAARKARELVRRKS 404
Query: 315 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERK 374
VL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+
Sbjct: 405 VLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKT 464
Query: 375 DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYR 434
D+A +YKN EIQ LI ALGLG+KGE+F+ LRYH+I+I+TDADVDGAHIRTLLLTFFYR
Sbjct: 465 DDAKIYKNTEIQALITALGLGIKGEEFEPSQLRYHRIVIMTDADVDGAHIRTLLLTFFYR 524
Query: 435 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEM 494
YQ+ + D+G +Y+ PPLYK+ERG+ YCY D E ++ SSFP NA Y IQRFKGLGEM
Sbjct: 525 YQRAMVDQGFVYIACPPLYKIERGRNHYYCYSDRERDQITSSFPENAKYEIQRFKGLGEM 584
Query: 495 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 554
MP QLW+TT+NPE R LK++ IEDAAEA+ F+ LMG RV R+E I+ + +NL LD
Sbjct: 585 MPQQLWDTTMNPETRTLKRVEIEDAAEADRTFTVLMGDRVAPRREFIETHGSKLNLTDLD 644
Query: 555 I 555
I
Sbjct: 645 I 645
>gi|255073667|ref|XP_002500508.1| predicted protein [Micromonas sp. RCC299]
gi|226515771|gb|ACO61766.1| predicted protein [Micromonas sp. RCC299]
Length = 703
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/553 (60%), Positives = 417/553 (75%), Gaps = 13/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK-- 59
++TVLHAGGKFGG SGY VSGGLHGVG+SVVNALS+S EVTVWR EY Q +SRG
Sbjct: 143 VLTVLHAGGKFGGDESGYHVSGGLHGVGISVVNALSDSTEVTVWRGDREYRQSFSRGAAL 202
Query: 60 -PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
P+T + V V K +GTR+RF PD +F FD N I R++ELAFLN T
Sbjct: 203 APMTEGSQDVANVGKK--KGTRVRFKPDPSIFKERQDFDPNIILARMKELAFLNSTATDE 260
Query: 119 LRKEDSDPEKNQ--YNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQW 175
++ D +K + Y E F GGL++YV LN +PLH+ + FR +VDG+ ++ ALQW
Sbjct: 261 ASMDEGDVKKTEEYYEEVLSFPGGLKDYVVDLNEGAEPLHEPITFRAEVDGVQVEGALQW 320
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+AY+DT+LGYANSIRT DGGTH++G+K SLTR +N+ +K+K +K+ D +L GEH+RE
Sbjct: 321 TKEAYTDTLLGYANSIRTSDGGTHLDGLKQSLTRAVNTQARKAKLLKEADANLGGEHIRE 380
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GL+ +I+V VP PEFEGQTKTRLGNPEVRKVV+ + E ++E+LE +P+ L SI SK+
Sbjct: 381 GLSAVIAVWVPQPEFEGQTKTRLGNPEVRKVVESVIGEQVSEHLEFYPNTLGSIFSKASQ 440
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KAA AAKRAR+LVR+KSVLRS SLPGKL+DCS + PE +EIF+VEGDSAGGSAKQGRD
Sbjct: 441 AQKAAEAAKRARELVRRKSVLRSGSLPGKLSDCSVSDPESTEIFLVEGDSAGGSAKQGRD 500
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQA+LPLRGKILNVERKDEA+MYKN EI +++ ALGLG+KGE F + LRY KI+ILT
Sbjct: 501 RRFQAVLPLRGKILNVERKDEASMYKNTEISSMVTALGLGLKGEPFDESQLRYSKIVILT 560
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ-----YCYDDAEL 470
DADVDGAHIRTLLLTF +RYQ+ LF++G +YV VPPLYKVE G+ + YCYD+A+L
Sbjct: 561 DADVDGAHIRTLLLTFLFRYQRGLFEQGKVYVAVPPLYKVESGRAGKNNPPTYCYDEAQL 620
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ ++ P A SIQRFKGLGEMMP QLW TTLNPE R+LK+L ++DAA AN F LM
Sbjct: 621 QAHLATLPEGASRSIQRFKGLGEMMPEQLWSTTLNPETRLLKRLTVDDAAMANKTFQLLM 680
Query: 531 GARVDTRKELIQN 543
+V R+E I+
Sbjct: 681 SDKVAPRREFIET 693
>gi|298491608|ref|YP_003721785.1| DNA gyrase subunit B ['Nostoc azollae' 0708]
gi|298233526|gb|ADI64662.1| DNA gyrase, B subunit ['Nostoc azollae' 0708]
Length = 645
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/558 (59%), Positives = 429/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E+ Q+Y R PV
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWRDNKEHLQRYERSFPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L V P + R GT I F PD Q+FT +I+FD+ T++GR+RELA+LN + I
Sbjct: 151 TEL--QVKPY-KEPRTGTSITFKPDTQIFTISIEFDYITLSGRLRELAYLNAGVKIIFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EYV ++N +K+PLH+ ++ + + + + ++++LQWC+
Sbjct: 208 HRLELLKSDTPRIEIYEYKGGIKEYVAYMNREKQPLHEEIIYVQGERNNVQVEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTIDGGTHLEGLKAVLTRTLNAIARKRNKIKENESNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP + D+IL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSFVGEVLTEYLEFHPSIADAILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D+A +YKN E+Q+LI ALGLGVKGE+F LRYH+I+I+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDAKIYKNNEVQSLITALGLGVKGEEFDSAQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY++ L ++G IY+ PPLYKVERGK +YCY + EL++ ++
Sbjct: 508 DVDGAHIRTLLLTFFYRYKRALIEQGFIYIACPPLYKVERGKNHEYCYSERELQQHIATL 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ A Y+IQRFKGLGEMMP QLW TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PTKANYNIQRFKGLGEMMPEQLWTTTMNPETRKMKQVEIEDAAEADRIFTILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSKLNLTDLDI 645
>gi|119487794|ref|ZP_01621303.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
gi|119455627|gb|EAW36764.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106]
Length = 645
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/558 (60%), Positives = 424/558 (75%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EV V RD +Y Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVQVLRDETQYTQRYQRGVPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L P K + GT ++F PD +FTT I+FD+ TIA R+RELA+LN + I L
Sbjct: 151 DELQSK--PSQGK-QTGTSVQFLPDTTIFTTGIEFDYATIANRLRELAYLNAGVRITLTD 207
Query: 122 EDSDP---EKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
D E+ + + + GG+ EY+ ++N +K+PLH DV+ + + + I++ALQWC
Sbjct: 208 NRLDLIQLEEAKTESFCYEGGIREYIAYMNREKQPLHEDVIYVSGERNNVQIEVALQWCV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N+ +K +K+ + +L GE+VREGL
Sbjct: 268 DAYSDNILGFANNIRTIDGGTHLEGLKAVLTRTMNNFARKRNKLKENESNLGGENVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP + D++L K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPHIADAVLEKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+RARDLVR+KSVL SS LPGKLADCS+ P ESEIF+VEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARRARDLVRRKSVLESSPLPGKLADCSTRIPAESEIFLVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D++ +YKN EIQ+LI ALGLG++GEDF LRYHKIII+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDSKIYKNNEIQSLITALGLGIRGEDFDSSQLRYHKIIIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERG+ YCY+D EL++ + F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRELVEQGFIYIACPPLYKVERGRNHYYCYNDRELQERLAEF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
PSNA Y+IQRFKGLGEMMP QLW TT+NPE RM+KQ+ +EDAA+A+ VF+ LMG RV R
Sbjct: 568 PSNANYNIQRFKGLGEMMPEQLWNTTMNPETRMIKQVEVEDAAQADNVFTVLMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ A +NL LDI
Sbjct: 628 REFIETNAPRLNLVDLDI 645
>gi|116071704|ref|ZP_01468972.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
gi|116065327|gb|EAU71085.1| DNA topoisomerase IV subunit B [Synechococcus sp. BL107]
Length = 655
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/559 (57%), Positives = 421/559 (75%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L + GT + F PD Q+FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GSLLSESQSEAEQGETGTTVCFLPDLQIFTGGIVFDYATLSARLRELAYLNGGVQIVFRD 216
Query: 122 ED----SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E SD YF+ GG++EYV ++N K LH D++ + DG+ ++ ALQWC
Sbjct: 217 EREASLSDAGDPHEEIYFYEGGIKEYVAYMNKAKDALHPDIIYVNSEKDGVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK KD D +L+GE++REG
Sbjct: 277 ADAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKDADSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+ IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVISLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D++ +YKN EIQ LI ALGLG+KGE+F +++LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDSKIYKNTEIQALITALGLGIKGEEFDQKSLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYRY++ L + G IY+ PPLYKVERGK YCY++++L+K
Sbjct: 517 ADVDGAHIRTLILTFFYRYKRELVEGGYIYIACPPLYKVERGKNHTYCYNESDLQKTLKG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y+IQRFKGLGEMMP QLWETT++P RM+K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGENAKYTIQRFKGLGEMMPKQLWETTMDPSTRMMKRIEIEDALEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSKELDMAALDI 655
>gi|434394941|ref|YP_007129888.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
gi|428266782|gb|AFZ32728.1| DNA gyrase subunit B [Gloeocapsa sp. PCC 7428]
Length = 646
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/562 (60%), Positives = 430/562 (76%), Gaps = 16/562 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q++ RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWIEVTVWRDKHVHVQRFERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIAL 119
T L V P + + GT + F PD +FTT +FD+ T+AGR+RELA+LN K+T +
Sbjct: 151 TEL--QVKP-SKEAKTGTSVTFQPDATIFTTGTEFDYITLAGRLRELAYLNAGVKITFSD 207
Query: 120 RK----EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQ 174
R+ + S+P+ Y + GG++EYV ++N +K+PLH+ + F + + + + +++ALQ
Sbjct: 208 RRLELLKSSEPKVETYE---YKGGIKEYVAYMNREKQPLHEEIIFVQGERNNVQVEVALQ 264
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
W DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +KD + +LSGEHVR
Sbjct: 265 WSVDAYTDNILGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKDNEPNLSGEHVR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYL+ HP+V DS+L K++
Sbjct: 325 EGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFHPNVADSVLDKAI 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KAA AA+ AR+LVR+KSVL SS LPGKLADCSS ESEIFIVEGDSAGGSAKQGR
Sbjct: 385 QAFKAAEAARHARELVRRKSVLESSPLPGKLADCSSRDASESEIFIVEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DRRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYH+I+I+
Sbjct: 445 DRRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDASQLRYHRIVIM 504
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-V 473
TDADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPL+KVERG+ YCY D EL+ +
Sbjct: 505 TDADVDGAHIRTLLLTFFYRYQRELIDQGYIYIACPPLFKVERGRSHYYCYSDRELQNLI 564
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ FP NA Y+IQRFKGLGEMMP QLWETT+NPE R +KQ+ IEDAAEA+ +F+ LMG R
Sbjct: 565 QHEFPDNANYTIQRFKGLGEMMPDQLWETTMNPETRTMKQVEIEDAAEADRIFTILMGDR 624
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V R+E I+ + +NL LDI
Sbjct: 625 VAPRREFIETYGSRLNLTELDI 646
>gi|260436552|ref|ZP_05790522.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
gi|260414426|gb|EEX07722.1| DNA gyrase, B subunit [Synechococcus sp. WH 8109]
Length = 655
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/559 (57%), Positives = 418/559 (74%), Gaps = 7/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALSE ++VTV R G + Q++ RG +
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSEWVQVTVRRQGQVHRQRFERGAAI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L P GT + F PD ++FT I FD+ T++ R+RELA+LN + I R
Sbjct: 157 GELASESQPAAESGETGTTVCFKPDLEIFTGGIVFDYATLSARLRELAYLNGGVRIVFRD 216
Query: 122 EDS---DPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D E + E YF+ GG++EYV ++N +K LH +++ + DG+ ++ ALQWC
Sbjct: 217 ERESARDEEGKPHEETYFYEGGIKEYVAYMNKEKDALHPEIIYVNSEKDGVQVEAALQWC 276
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
SDAYSD++LG+AN+IRT+DGGTHIEG+K LTRTLN+ KK K+ D +L+GE++REG
Sbjct: 277 SDAYSDSILGFANNIRTVDGGTHIEGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+VP PEFEGQTKT+LGN EVR +VD V E L+++LE +P V+ IL K++ A
Sbjct: 337 LTAVLSVKVPEPEFEGQTKTKLGNTEVRGIVDNLVGEALSQFLEFNPSVISLILEKAIQA 396
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR
Sbjct: 397 FNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIYIVEGDSAGGSAKQGRDR 456
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF + LRYH+++I+TD
Sbjct: 457 RFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDVKNLRYHRVVIMTD 516
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQK L + G IY+ PPLYKVERGK YCY++ +L+K
Sbjct: 517 ADVDGAHIRTLLLTFFYRYQKELVEGGYIYIACPPLYKVERGKNHTYCYNEGDLQKTLEG 576
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A Y+IQRFKGLGEMMP QLWETT++P R +K++ IEDA EA+ +F+ LMG +V
Sbjct: 577 FGEKANYTIQRFKGLGEMMPKQLWETTMDPTTRTMKRVEIEDAIEADRIFTILMGDKVAP 636
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +++ LDI
Sbjct: 637 RREFIETHSAELDMAALDI 655
>gi|218246132|ref|YP_002371503.1| DNA gyrase subunit B [Cyanothece sp. PCC 8801]
gi|257059181|ref|YP_003137069.1| DNA gyrase subunit B [Cyanothece sp. PCC 8802]
gi|218166610|gb|ACK65347.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8801]
gi|256589347|gb|ACV00234.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8802]
Length = 641
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/555 (59%), Positives = 425/555 (76%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE + VTVWR+G + Q+Y RG PV
Sbjct: 94 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVNVTVWREGNIHTQRYERGNPV 151
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T+L + P S GT I F PD ++F+ I+FD+NT++GR+RELA+LN + I
Sbjct: 152 TSLAANPDPDHST---GTSISFLPDIEIFSGGIEFDYNTLSGRLRELAYLNAGVKITFT- 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D+ P + Y + GG++EYV ++ DK LH D++ + +G+ I++ALQWC DAY
Sbjct: 208 -DNRPAEIHQETYCYEGGIKEYVAYMCRDKDALHQDIIYVSGEKNGVQIEVALQWCIDAY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +L GE+VREGLT +
Sbjct: 267 SDNLLGFANNIRTIDGGTHLEGLKTVLTRTINNVARKRNKIKENEANLGGENVREGLTGV 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D+I+ K++ A KAA
Sbjct: 327 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLNEYLEFNPQVADNIIEKAVQAFKAA 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCS+ PEESEIF+VEGDSAGGSAKQGRDRRFQA
Sbjct: 387 EAARRARELVRRKSVLESSPLPGKLADCSTRDPEESEIFLVEGDSAGGSAKQGRDRRFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+++I+TDADVD
Sbjct: 447 ILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPSQLRYHRVVIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYKVERG+ YCY++ EL++ +S P+N
Sbjct: 507 GAHIRTLLLTFFYRYQRELVDQGYVYIACPPLYKVERGRNHVYCYNERELQEHLNSLPAN 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLWETT+NPE R +K++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 567 ANYTIQRFKGLGEMMPTQLWETTMNPETRTMKRVEIEDAAEADRIFTVLMGDRVAPRREF 626
Query: 541 IQNAANLVNLDHLDI 555
I+ +NL LDI
Sbjct: 627 IETYGPKLNLTDLDI 641
>gi|434398522|ref|YP_007132526.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
gi|428269619|gb|AFZ35560.1| DNA gyrase subunit B [Stanieria cyanosphaera PCC 7437]
Length = 642
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/555 (58%), Positives = 425/555 (76%), Gaps = 6/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG P
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDQKIHTQRYERGIPS 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + R GT + F+PD ++FT I F++N +AGR+RELA+LN + I
Sbjct: 151 GDLVVQA-NIQEPQRTGTAVHFFPDTKIFTETIHFEYNVLAGRLRELAYLNAGVKITF-- 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+ + YF+ GG++EYV ++ +K+PLH D++ + + +G+ I++ALQWC DA+
Sbjct: 208 TDHRIEETRQEIYFYEGGIKEYVTYMTREKEPLHQDIIYVQGEKNGVNIEVALQWCVDAF 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+D +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +L GE+VREGLT +
Sbjct: 268 NDNLLGFANNIRTIDGGTHLEGLKTVLTRTINNIARKRNKIKENESNLGGENVREGLTGV 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V DS++ K++ A KAA
Sbjct: 328 ISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLNEYLEFNPQVADSVIEKAVQAFKAA 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCSS P ESEIF+VEGDSAGGSAKQGRDR+FQA
Sbjct: 388 EAARRARELVRRKSVLESSPLPGKLADCSSRDPGESEIFLVEGDSAGGSAKQGRDRQFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+++I+TDADVD
Sbjct: 448 ILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSSQLRYHRVVIMTDADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYKVERG+ YCY D EL+++ FP+N
Sbjct: 508 GAHIRTLLLTFFYRYQRELVDQGYVYIACPPLYKVERGRNHYYCYSDRELQQLTREFPAN 567
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 568 ANYTIQRFKGLGEMMPEQLWETTMNPETRTLKRVEIEDAAEADRIFTVLMGDRVAPRREF 627
Query: 541 IQNAANLVNLDHLDI 555
I+ + ++L+ LDI
Sbjct: 628 IETHGSRLDLNELDI 642
>gi|220908378|ref|YP_002483689.1| DNA gyrase subunit B [Cyanothece sp. PCC 7425]
gi|219864989|gb|ACL45328.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7425]
Length = 645
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/558 (59%), Positives = 419/558 (75%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALS LE VWRDG + Q++ RG P
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSWLEAKVWRDGKVFTQRFERGLPA 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L +R GT I+F PD ++FT I+FD+ T++GR+RELA+LN + I R
Sbjct: 151 TDLKAQP---SGGNRTGTAIQFMPDAEIFTETIEFDYKTLSGRLRELAYLNAGVKIEFRD 207
Query: 122 EDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
D K YF+ GG++EYV ++N DK+PLH +++ + + + + +++ALQWC+
Sbjct: 208 GRLDLLKRDEPLLETYFYEGGIKEYVSYMNVDKEPLHQEIIYVQGERNDVQVEVALQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN+ +K +K+ D +L+GE+VREG+
Sbjct: 268 DAYTDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNNFARKRNKLKEGDPNLAGENVREGM 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYL+ P V+DSIL K++ A
Sbjct: 328 TAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLDFRPAVVDSILEKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P E+EIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPREAEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYHKII +TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDASNLRYHKIIAMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L D+G IYV PPLYK+ERG+ YCY+D E ++ +
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRQLVDQGYIYVACPPLYKIERGRNHYYCYNDRERDQIIAGL 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
NA Y IQRFKGLGEMMP QLW+TT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 GENARYEIQRFKGLGEMMPQQLWDTTMNPETRTLKQVTIEDAAEADRIFNILMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ +NL LDI
Sbjct: 628 REFIETYGPRLNLADLDI 645
>gi|443326004|ref|ZP_21054673.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
gi|442794385|gb|ELS03803.1| DNA gyrase, B subunit [Xenococcus sp. PCC 7305]
Length = 644
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/555 (58%), Positives = 431/555 (77%), Gaps = 4/555 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGGS SGY VSGGLHGVG+SVVNALSE +EVTVWRDG + Q+Y +GK
Sbjct: 93 VMTVLHAGGKFGGSGSGYKVSGGLHGVGVSVVNALSEWVEVTVWRDGDIHLQRYEKGKAQ 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L D+ + GT + F+PD +FT I+F++N +AGR++ELA+LN + I
Sbjct: 153 GVLQSSP-NADNPTQTGTSVHFFPDATIFTDTIEFEYNVLAGRLKELAYLNAGVKITF-T 210
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
++ + E Q Y + GG++EYV ++ +K+ LH D++ ++ +G+T+++ALQWC DAY
Sbjct: 211 DNREAEPRQ-ELYCYEGGIKEYVAYMTREKQALHEDILYVAEEKNGVTVEVALQWCIDAY 269
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+K LTRT+N+ +K +KD D +L GE++REGLT +
Sbjct: 270 SDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNFARKRNKLKDSDKNLGGENIREGLTAV 329
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L +YLE + V D+I+ K++ A KAA
Sbjct: 330 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLKDYLEFNLGVGDAIIEKAVQAFKAA 389
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+ AR+LVR+KSVL S++LPGKLADCSS P ESEI++VEGDSAGGSAKQGRDR+FQA
Sbjct: 390 EAARHARELVRRKSVLESTTLPGKLADCSSRDPAESEIYLVEGDSAGGSAKQGRDRQFQA 449
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ++I ALGLG+KGE+F E LRYH+I+I+TDADVD
Sbjct: 450 ILPLRGKILNIEKTDDAKIYKNNEIQSMITALGLGIKGEEFNPEQLRYHRIVIMTDADVD 509
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ + D+G +Y+ PPLYK+ERG+ YCY D +L++ + P+N
Sbjct: 510 GAHIRTLLLTFFYRYQREMVDQGYVYIACPPLYKLERGRNHYYCYSDRDLQQKIAELPAN 569
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 570 ANYTIQRFKGLGEMMPQQLWDTTMNPETRMMKRVEIEDAAEADRIFTVLMGDRVAPRREF 629
Query: 541 IQNAANLVNLDHLDI 555
I+ A +NL LDI
Sbjct: 630 IETNAPKLNLMDLDI 644
>gi|300865369|ref|ZP_07110180.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
gi|300336672|emb|CBN55330.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506]
Length = 646
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/562 (59%), Positives = 433/562 (77%), Gaps = 16/562 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD ++Q++ RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHNQRFERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIAL 119
T L V ++R GT + F PD Q+F+T I+FD+ ++GR+RELA+LN K+T +
Sbjct: 151 TDL---VDKPSKENRSGTSVSFLPDTQIFSTGIEFDYTILSGRLRELAYLNAGVKITFSD 207
Query: 120 RK----EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQ 174
R+ + S+P Y + GG++EY+ ++N DK+PLH+ V F + + + + ++++LQ
Sbjct: 208 RRLELLKSSEP---HIETYCYEGGIKEYIAYMNRDKQPLHEEVIFIQGERNNVQVEVSLQ 264
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
WC DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRT+N++ +K +K+ + +L GE++R
Sbjct: 265 WCIDAYSDNVLGFANNIRTIDGGTHLEGLKAVLTRTMNAIARKRNKIKENEPNLGGENIR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V D+IL K++
Sbjct: 325 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPQVADTILEKAI 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KAA AA+RARDLVR+KSVL SS LPGKLADCSS P +SEI++VEGDSAGGSAKQGR
Sbjct: 385 QAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPSKSEIYLVEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG++G++F LRYH I+I+
Sbjct: 445 DRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIRGDEFDPSQLRYHHIVIM 504
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-V 473
TDADVDGAHIRTLLLTFFYRYQ++L D+G IY+ PPLYKVERG+ YCY D EL+ +
Sbjct: 505 TDADVDGAHIRTLLLTFFYRYQRSLVDQGYIYIACPPLYKVERGRNHFYCYSDRELQNLI 564
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
++ FP+NA Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+ LMG R
Sbjct: 565 RNEFPANANYTIQRFKGLGEMMPQQLWETTMNPESRTLKRVEIEDAAEADRIFTILMGDR 624
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V R+E I+ +NL LDI
Sbjct: 625 VAPRREFIETYGPKLNLTDLDI 646
>gi|428315585|ref|YP_007113467.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
gi|428239265|gb|AFZ05051.1| DNA gyrase subunit B [Oscillatoria nigro-viridis PCC 7112]
Length = 646
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/562 (59%), Positives = 426/562 (75%), Gaps = 16/562 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVW D E+ Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWLDQKEHLQRYERGNPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V P + R GT + F PD Q+FTT I+FD+ T+AGR+REL +LN + I
Sbjct: 151 TEL--KVKP-NKGTRTGTSVSFLPDTQIFTTGIEFDYTTLAGRLRELGYLNAGVRITFSD 207
Query: 122 ------EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 174
+ S+P Y + GG++EY+ ++N +K+PLHD V+ + + + + I++ALQ
Sbjct: 208 HRLALLKSSEP---HIETYCYEGGIKEYIAYMNREKQPLHDEVIYVQGERNNVQIEVALQ 264
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
WC DA+SD +LG+AN+IRTIDGGTH+EG+KA LTRT+NS+ +K +K+ + +L+GE+VR
Sbjct: 265 WCVDAFSDNVLGFANNIRTIDGGTHLEGLKAVLTRTMNSIARKRNKIKENEPNLAGENVR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V D+IL K++
Sbjct: 325 EGLTAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPQVADAILEKAI 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KAA AA+RARDLVR+KSVL SS LPGKLADCSS P SEI++VEGDSAGGSAKQGR
Sbjct: 385 QAFKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPALSEIYLVEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DR+FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH I+I+
Sbjct: 445 DRQFQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPAQLRYHHIVIM 504
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-V 473
TDADVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERG+ YCY D E+ V
Sbjct: 505 TDADVDGAHIRTLLLTFFYRYQRALVEQGYIYIACPPLYKVERGRNHYYCYSDREMNNLV 564
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
++ FP+NA Y++QRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG R
Sbjct: 565 RNEFPANANYTVQRFKGLGEMMPTQLWDTTMNPETRTLKRVEIEDAAEADRIFTILMGDR 624
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V R+E I+ +NL LDI
Sbjct: 625 VAPRREFIETYGPKLNLLDLDI 646
>gi|428771456|ref|YP_007163246.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
gi|428685735|gb|AFZ55202.1| DNA gyrase subunit B [Cyanobacterium aponinum PCC 10605]
Length = 649
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/555 (59%), Positives = 422/555 (76%), Gaps = 7/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE ++VTVWR + Q+Y RGKP+
Sbjct: 101 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVQVTVWRKDKVHTQRYERGKPI 158
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L D+ GT + F PD Q+FT +FD+N ++ R+RELA+LN + I
Sbjct: 159 TDLETK--DNDTGHSTGTSVSFLPDNQIFTETTEFDYNLLSNRLRELAYLNAGVKITFTD 216
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
+ PE+ + Y + GG++EYV ++ +K+ LH D++ + +G+ +++ALQWC DAY
Sbjct: 217 KRVTPEREE--TYCYEGGIKEYVTYMTREKEVLHQDIIYTSGEKNGVQVEVALQWCIDAY 274
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SDT+LG+AN+IRTIDGGTH+EG+K LTRTLN++G+K +K+ D +L GE+VREGLT +
Sbjct: 275 SDTILGFANNIRTIDGGTHLEGLKTVLTRTLNNIGRKRNKIKENDSNLGGENVREGLTAV 334
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP+PEFEGQTKT+LGN EVR +VD V E L EYLE +P V DSI+ K++ A KAA
Sbjct: 335 ISVKVPDPEFEGQTKTKLGNSEVRGIVDSLVGEALNEYLEFNPHVADSIIEKAIQAFKAA 394
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCSS P ESEIF+VEGDSAGGSAKQGRDRRFQA
Sbjct: 395 EAARRARELVRRKSVLESSPLPGKLADCSSRDPAESEIFLVEGDSAGGSAKQGRDRRFQA 454
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KG++F LRYH I+I+TDADVD
Sbjct: 455 ILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGDEFDASQLRYHHIVIMTDADVD 514
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYK+ERGK YCY D EL++ + FP N
Sbjct: 515 GAHIRTLLLTFFYRYQRELVEQGYIYIACPPLYKLERGKNHFYCYSDRELQQKIAEFPPN 574
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP QLW+TT+NPE RM+K++ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 575 ANYNIQRFKGLGEMMPEQLWDTTMNPETRMMKRVEIEDAAEADRIFTVLMGDRVAPRREF 634
Query: 541 IQNAANLVNLDHLDI 555
I+ +NL LD+
Sbjct: 635 IETHGPRLNLTELDV 649
>gi|428301860|ref|YP_007140166.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
gi|428238404|gb|AFZ04194.1| DNA gyrase subunit B [Calothrix sp. PCC 6303]
Length = 645
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/541 (58%), Positives = 410/541 (75%), Gaps = 7/541 (1%)
Query: 19 YSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQG 78
Y VSGGLHGVG+SVVN LSE L+VT+WRD Y Q+Y RG L + R G
Sbjct: 108 YKVSGGLHGVGVSVVNGLSEWLDVTIWRDKKVYTQRYERGVAQAELKNQPY---KEARTG 164
Query: 79 TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL---RKEDSDPEKNQYNEYF 135
T I+F PD +FTT +FD+ T++ R+RELA+LN + I R E + + Y
Sbjct: 165 TAIKFKPDDTIFTTGTEFDYTTLSSRLRELAYLNAGVRITFADNRLELLKSDTPRLETYE 224
Query: 136 FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTI 194
+ GG+ EYV ++N DK+ H+ ++ + + + +++ALQWCSDAYSD +LG+AN+IRT+
Sbjct: 225 YKGGIREYVAYMNADKQAQHEEIIYVQGERHNVQVEVALQWCSDAYSDNVLGFANNIRTV 284
Query: 195 DGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQT 254
DGGTH+EG+K LTRT+N++ +K +K+ + +LSGEHVREGLT +ISV+VP+PEFEGQT
Sbjct: 285 DGGTHLEGLKTVLTRTMNAIARKRNKIKENESNLSGEHVREGLTAVISVKVPDPEFEGQT 344
Query: 255 KTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKS 314
KT+LGN EVR +VD V E LTEYLE HP V DSIL K++ A KAA AA+ AR+LVR+KS
Sbjct: 345 KTKLGNTEVRGIVDTLVGEVLTEYLEFHPGVADSILDKAIQAFKAAEAARHARELVRRKS 404
Query: 315 VLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERK 374
VL SS LPGKLADCS+ P ESEI++VEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+
Sbjct: 405 VLESSPLPGKLADCSTRDPAESEIYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKT 464
Query: 375 DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYR 434
D++ +YKN EIQ+LI ALGLGV+G++F LRYH+I+I+TDADVDGAHIRTLLLTFFYR
Sbjct: 465 DDSKIYKNNEIQSLITALGLGVRGDEFDATQLRYHRIVIMTDADVDGAHIRTLLLTFFYR 524
Query: 435 YQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEM 494
YQ+ L ++G IY+ PPLYK+ERG+ QYCY D EL++ S FP NA Y+IQRFKGLGEM
Sbjct: 525 YQRALVEQGYIYIACPPLYKLERGRNHQYCYSDRELQQKISEFPDNANYTIQRFKGLGEM 584
Query: 495 MPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 554
MP QLW+TT+NPE+R LK++ IEDAAEA+ +F+ LMG RV R+E I+ + +N+ LD
Sbjct: 585 MPQQLWDTTMNPERRTLKRVEIEDAAEADRIFTILMGDRVAPRREFIETYGSKLNMLDLD 644
Query: 555 I 555
I
Sbjct: 645 I 645
>gi|334120265|ref|ZP_08494347.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
gi|333457053|gb|EGK85680.1| DNA gyrase, B subunit [Microcoleus vaginatus FGP-2]
Length = 646
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/559 (59%), Positives = 424/559 (75%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD E+ Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDQKEHLQRYERGFPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + R GT + F PD Q+F+T I+FD+ +AGR+REL +LN + I
Sbjct: 151 TELNAKP---NKGTRTGTSVSFLPDTQIFSTGIEFDYTILAGRLRELGYLNAGVRITFSD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N +K+PLH+ V+ + + + + I++ALQWC
Sbjct: 208 HRLELLKSSEPRIETYCYEGGIKEYIAYMNREKQPLHEEVIYVQGERNNVQIEVALQWCV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DA+SD +LG+AN+IRTIDGGTH+EG+KA LTRT+NS+ +K +K+ + +L+GE+VREGL
Sbjct: 268 DAFSDNVLGFANNIRTIDGGTHLEGLKAVLTRTMNSIARKRNKIKENEPNLAGENVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V D+IL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPQVADAILEKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+RARDLVR+KSVL SS LPGKLADCSS P SEI++VEGDSAGGSAKQGRDR+
Sbjct: 388 KAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPALSEIYLVEGDSAGGSAKQGRDRQ 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH I+I+TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPGQLRYHHIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSS 476
DVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYKVERG+ YCY D E+ +++
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALVDQGYIYIACPPLYKVERGRNHYYCYSDREMNNLIRNE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP+NA Y+IQRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPANANYTIQRFKGLGEMMPTQLWDTTMNPETRTLKRVEIEDAAEADRIFTILMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +NL LDI
Sbjct: 628 RREFIETYGPKLNLLDLDI 646
>gi|434405383|ref|YP_007148268.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
gi|428259638|gb|AFZ25588.1| DNA gyrase subunit B [Cylindrospermum stagnale PCC 7417]
Length = 646
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/559 (59%), Positives = 426/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ + Q+Y RG V
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEFVEVTVWREKKVFTQRYERGAAV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
T L + R GT + F PD Q+FTT+I+FD+ T++GR+RELA+LN + I
Sbjct: 151 TELQAKSY---KEARTGTSVTFKPDTQIFTTSIEFDYITLSGRLRELAYLNAGVKITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
R E + + Y + GG++EY+ ++N +K PLH+ ++ + + + + I+++LQWC+
Sbjct: 208 HRLELLKSDTAKVETYEYKGGIKEYIAYMNREKLPLHEEIIYVQGERNNVQIEVSLQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRT+DGGTH+EG+KA LTRTLN++ +K +K+ + +LSGEHVREGL
Sbjct: 268 DAYTDNVLGFANNIRTVDGGTHLEGLKAVLTRTLNAIARKRNKIKENEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P V DSIL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPGVADSILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCS+ P ESEI+IVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSTRDPSESEIYIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKG++F LRYH+I+I+TDA
Sbjct: 448 TQAILPLRGKILNIEKTDDAKIYKNNEIQALITALGLGVKGDEFDAAQLRYHRIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSS 476
DVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+KVERG+ +YCY D EL++ ++
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALIEQGFIYIACPPLFKVERGRSDPKYCYSDRELQQHIAT 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FPSNA Y+IQRFKGLGEMMP QLW TT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPSNANYNIQRFKGLGEMMPAQLWTTTMNPETRTLKQVEIEDAAEADRIFTILMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ + +NL LDI
Sbjct: 628 RREFIETYGSKLNLTDLDI 646
>gi|172035674|ref|YP_001802175.1| DNA gyrase subunit B [Cyanothece sp. ATCC 51142]
gi|354554914|ref|ZP_08974217.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
gi|171697128|gb|ACB50109.1| DNA gyrase B subunit [Cyanothece sp. ATCC 51142]
gi|353553068|gb|EHC22461.1| DNA gyrase, B subunit [Cyanothece sp. ATCC 51472]
Length = 642
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/555 (59%), Positives = 422/555 (76%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q+Y RG P+
Sbjct: 95 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVIVKVWRDDEVHTQRYERGIPI 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L D GT I F PDK++FT I+FD++T+AGR+RELA+LN + I
Sbjct: 153 TNLETKP---DKNHSTGTSISFLPDKKIFTVGIEFDYSTLAGRLRELAYLNAGVRITF-- 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D+ E+ Y + GG++EYV ++ DK PLH D++ + +G +++AL WC DAY
Sbjct: 208 TDNRKEEPHVESYCYEGGIKEYVTYMCRDKDPLHQDIIFVSGEKNGTQVEVALLWCVDAY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +KD D +L GE+VREGLT +
Sbjct: 268 SDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKDNDANLGGENVREGLTGV 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYLE +P V DSI+ K++ A KAA
Sbjct: 328 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFNPHVADSIIEKAVQAFKAA 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCS+ PEESEIF+VEGDSAGGSAKQGRDRRFQA
Sbjct: 388 EAARRARELVRRKSVLESSPLPGKLADCSTRDPEESEIFLVEGDSAGGSAKQGRDRRFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I+I+TDADVD
Sbjct: 448 ILPLRGKIINIEKTDDARIYKNNEIQSLITALGLGIKGEEFDPAQLRYHRIVIMTDADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYKVERG+ YCY++ +L++ +S P+N
Sbjct: 508 GAHIRTLLLTFFYRYQRALVDQGYVYIACPPLYKVERGRNHVYCYNERQLQEHINSLPAN 567
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A YSIQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 568 ANYSIQRFKGLGEMMPTQLWDTTMNPETRRMKQVEIEDAAEADRIFTILMGDRVAPRREF 627
Query: 541 IQNAANLVNLDHLDI 555
I+ ++L+ LDI
Sbjct: 628 IETYGPKLDLNDLDI 642
>gi|67920055|ref|ZP_00513575.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
gi|67857539|gb|EAM52778.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501]
Length = 642
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 426/559 (76%), Gaps = 16/559 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q+Y RG P+
Sbjct: 95 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVVVNVWRDNNIHTQRYERGIPL 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
+L D K GT + F PD Q+F+ I+FD++T+AGR++ELA+LN + I
Sbjct: 153 GSLDTKP---DKKHSTGTSVSFLPDIQIFSGGIEFDYSTLAGRLKELAYLNAGVKITFTD 209
Query: 120 -RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
RKE+ YNE Y + GG++EYV ++ DK PLH D++ + +G +++AL WC
Sbjct: 210 HRKEEP------YNETYCYEGGIKEYVTYMCRDKDPLHQDIIYVSGEKNGTQVEVALLWC 263
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ D +L GE+VREG
Sbjct: 264 VDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKENDANLGGENVREG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYLE +P V D+I+ K++ A
Sbjct: 324 LTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFNPQVADNIIEKAVQA 383
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KAA AA+RAR+LVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGGSAKQGRDR
Sbjct: 384 FKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGGSAKQGRDR 443
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRYH+I+I+TD
Sbjct: 444 RFQAILPLRGKIINIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSEQLRYHRIVIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQ++L D+G +Y+ PPLYKVERG+ YCY++ +L++ +S
Sbjct: 504 ADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIACPPLYKVERGRNHMYCYNERQLQEHINS 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P+NA Y+IQRFKGLGEMMP QLWETT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV
Sbjct: 564 LPNNANYTIQRFKGLGEMMPTQLWETTMNPETRSMKQVEIEDAAEADRIFTILMGDRVAP 623
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +NL LDI
Sbjct: 624 RREFIETYGPKLNLTDLDI 642
>gi|78780112|ref|YP_398224.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
gi|78713611|gb|ABB50788.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9312]
Length = 655
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/557 (56%), Positives = 425/557 (76%), Gaps = 6/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGVSQ 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L ++GT I F PDK +F+ I+F++ ++ R+RELA+LN + I R
Sbjct: 160 NVLQSKKQ-TKKPFKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRD 218
Query: 122 EDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + + E Y + GG++EYVQ++N +K+ +H D++ + + ++ ALQWCSD
Sbjct: 219 ERNKLSDGSFKEEIYLYQGGIKEYVQYMNAEKEAIHPDIIYVDSQKENVYVEAALQWCSD 278
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+GE++REGLT
Sbjct: 279 VYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLT 338
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+++E +P +LD +L K++ +
Sbjct: 339 VVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKFMEFNPGILDLVLEKAIQSFN 398
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR+F
Sbjct: 399 AAEAARRARELVRRKSVLESSTLPGKLADCSSRDPAESEIYIVEGDSAGGSAKQGRDRKF 458
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDAD
Sbjct: 459 QAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDAD 518
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK +YCY++ +LK SF
Sbjct: 519 VDGAHIRTLLLTFFYRYQRELVEKGYIYIACPPLYKVERGKNHKYCYNENQLKDTIGSFG 578
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+
Sbjct: 579 ENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRR 638
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ ++ +++ LDI
Sbjct: 639 EFIETHSSKLDMATLDI 655
>gi|254526641|ref|ZP_05138693.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
gi|221538065|gb|EEE40518.1| DNA gyrase, B subunit [Prochlorococcus marinus str. MIT 9202]
Length = 655
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/557 (56%), Positives = 423/557 (75%), Gaps = 6/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGLSK 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + ++GT I F PDK +F+ I+F++ ++ R+RELA+LN + I R
Sbjct: 160 GELQTKK-QIGKSSKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRD 218
Query: 122 EDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + + E Y + GG++EYV+++N +K+ +H +++ + + ++ ALQWCSD
Sbjct: 219 ERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKESIHPEIIYVDSQRENVYVEAALQWCSD 278
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+GE++REGLT
Sbjct: 279 VYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLT 338
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL K++ +
Sbjct: 339 VVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFN 398
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR F
Sbjct: 399 AAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNF 458
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDAD
Sbjct: 459 QAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDAD 518
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +LK F
Sbjct: 519 VDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQLKNTIEGFG 578
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+
Sbjct: 579 ENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRR 638
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ ++ +++ LDI
Sbjct: 639 EFIETHSSNLDMASLDI 655
>gi|416374474|ref|ZP_11683197.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
gi|357266694|gb|EHJ15286.1| DNA gyrase subunit B [Crocosphaera watsonii WH 0003]
Length = 642
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 426/559 (76%), Gaps = 16/559 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q+Y RG P+
Sbjct: 95 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVVVNVWRDNNIHTQRYERGIPL 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
+L D K GT + F PD Q+F+ I+FD++T+AGR++ELA+LN + I
Sbjct: 153 GSLDTKP---DKKHSTGTSVSFLPDIQIFSGGIEFDYSTLAGRLKELAYLNAGVKITFTD 209
Query: 120 -RKEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
RKE+ YNE Y + GG++EYV ++ DK PLH D++ + +G +++AL WC
Sbjct: 210 HRKEEP------YNETYCYEGGIKEYVTYMCRDKDPLHQDIIYVSGEKNGTQVEVALLWC 263
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ D +L GE+VREG
Sbjct: 264 VDAYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKENDANLGGENVREG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+VP PEFEGQTKT+LGN EVR +VD V E LTEYLE +P V D+I+ K++ A
Sbjct: 324 LTGVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFNPQVADNIIEKAVQA 383
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KAA AA+RAR+LVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGGSAKQGRDR
Sbjct: 384 FKAAEAARRARELVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGGSAKQGRDR 443
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F E LRYH+I+I+TD
Sbjct: 444 RFQAILPLRGKIINIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSEQLRYHRIVIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQ++L D+G +Y+ PPLYKVERG+ YCY++ +L++ +S
Sbjct: 504 ADVDGAHIRTLLLTFFYRYQRSLVDQGYVYIACPPLYKVERGRNHVYCYNERQLQEHINS 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P+NA Y+IQRFKGLGEMMP QLWETT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV
Sbjct: 564 LPNNANYTIQRFKGLGEMMPTQLWETTMNPETRSMKQVEIEDAAEADRIFTILMGDRVAP 623
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +NL LDI
Sbjct: 624 RREFIETYGPKLNLTDLDI 642
>gi|126660369|ref|ZP_01731481.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
gi|126618342|gb|EAZ89099.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110]
Length = 642
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/555 (59%), Positives = 422/555 (76%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE + V VWRD + Q+Y RG P+
Sbjct: 95 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVIVKVWRDDQVHTQRYERGVPI 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T+L D GT I F PDK +FT +FD++T+AGR+RELA+LN + I
Sbjct: 153 TSLETKA---DKDHSTGTSISFLPDKTIFTVGTEFDYSTLAGRLRELAYLNAGVKITF-- 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D+ E+ Y + GG++EYV ++ DK PLH D++ + +G +++AL WC DAY
Sbjct: 208 TDNRKEEPHIESYCYEGGIKEYVTYMCRDKDPLHQDIIFVSGEKNGTQVEVALLWCVDAY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +KD D +L GE+VREGLT +
Sbjct: 268 SDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKLKDNDSNLGGENVREGLTGV 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L+EYLE +P V DSI+ K++ A KAA
Sbjct: 328 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLSEYLEFNPHVADSIIEKAVQAFKAA 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCS+ PEESEIF+VEGDSAGGSAKQGRDRRFQA
Sbjct: 388 EAARRARELVRRKSVLESSPLPGKLADCSTRDPEESEIFLVEGDSAGGSAKQGRDRRFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I+I+TDADVD
Sbjct: 448 ILPLRGKIINIEKTDDARIYKNNEIQSLITALGLGIKGEEFDSSQLRYHRIVIMTDADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ++L D+G +Y+ PPLYKVERG+ YCY++ +L++ +S P+N
Sbjct: 508 GAHIRTLLLTFFYRYQRSLVDQGYVYIACPPLYKVERGRNHVYCYNERQLQEHINSLPAN 567
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A YSIQRFKGLGEMMP QLW+TT+NPE R +KQ+ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 568 ANYSIQRFKGLGEMMPTQLWDTTMNPETRRMKQVEIEDAAEADRIFTILMGDRVAPRREF 627
Query: 541 IQNAANLVNLDHLDI 555
I+ ++L+ LDI
Sbjct: 628 IETYGPKLDLNDLDI 642
>gi|126697163|ref|YP_001092049.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9301]
gi|126544206|gb|ABO18448.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9301]
Length = 655
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/557 (56%), Positives = 425/557 (76%), Gaps = 6/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE ++VTV+RDG E++Q++ +G
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVKVTVYRDGSEFNQRFEKGISK 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L S ++GT I F PDK +F+ I+F++ ++ R+RELA+LN + I R
Sbjct: 160 GELESKKQTGKSS-KKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRD 218
Query: 122 EDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + + E Y + GG++EYV+++N +K+ +H +++ + + ++ ALQWCSD
Sbjct: 219 ERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKESIHPEIIYVDSQKENVYVEAALQWCSD 278
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+GE++REGLT
Sbjct: 279 VYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLT 338
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL K++ +
Sbjct: 339 VVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFN 398
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR F
Sbjct: 399 AAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNF 458
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F + +LRYH+++I+TDAD
Sbjct: 459 QAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDESSLRYHRVVIMTDAD 518
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +LK F
Sbjct: 519 VDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQLKDTIQGFG 578
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+
Sbjct: 579 ENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRR 638
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ ++ +++ LDI
Sbjct: 639 EFIETHSSNLDMATLDI 655
>gi|157414241|ref|YP_001485107.1| DNA gyrase subunit B [Prochlorococcus marinus str. MIT 9215]
gi|157388816|gb|ABV51521.1| DNA gyrase, subunit B [Prochlorococcus marinus str. MIT 9215]
Length = 655
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/557 (56%), Positives = 422/557 (75%), Gaps = 6/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGLSK 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + ++GT I F PDK +F+ I+F++ ++ R+RELA+LN + I R
Sbjct: 160 GELQTKK-QIGKSSKKGTTICFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRD 218
Query: 122 EDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + + E Y + GG++EYV+++N +K +H +++ + + ++ ALQWCSD
Sbjct: 219 ERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKDSIHPEIIYVDSQRENVYVEAALQWCSD 278
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+GE++REGLT
Sbjct: 279 VYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLT 338
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL K++ +
Sbjct: 339 VVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPGILDLILEKAIQSFN 398
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR F
Sbjct: 399 AAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNF 458
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F +LRYH+++I+TDAD
Sbjct: 459 QAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDVSSLRYHRVVIMTDAD 518
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +LK F
Sbjct: 519 VDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQLKNTIEGFG 578
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+
Sbjct: 579 ENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRR 638
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ ++ +++ LDI
Sbjct: 639 EFIETHSSNLDMASLDI 655
>gi|303273552|ref|XP_003056137.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462221|gb|EEH59513.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/551 (59%), Positives = 412/551 (74%), Gaps = 11/551 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE EVTVW+ G + Q +SRG V
Sbjct: 69 VLTVLHAGGKFGGDESGYHVSGGLHGVGISVVNALSELCEVTVWKGGKVFTQAFSRGYAV 128
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR- 120
+T P + + GTR+RF PD Q+F FD N I R++ELAFLN T+ R
Sbjct: 129 ADMTESFEP-GADGKNGTRVRFKPDHQIFKEKASFDPNIIISRMKELAFLNSTATLKFRI 187
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
+ + N F GGL++YV LN + LHD + FR +V+G+ ++ ALQW +
Sbjct: 188 PVDVHKKMTRKKANILSFPGGLKDYVVDLNMGSETLHDPITFRSEVEGVQVEGALQWTRE 247
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
A++DT LGYANSIRT DGG+H++G+K +LTRT+N+ +K+K +KD D +L GEHVREGL+
Sbjct: 248 AFTDTTLGYANSIRTSDGGSHLDGLKFALTRTVNAQARKAKLLKDGDSNLGGEHVREGLS 307
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+++V VP PEFEGQTKTRLGNPEVRKVV+ + E + E+LE +P VL SI +K+ A K
Sbjct: 308 AVLAVWVPQPEFEGQTKTRLGNPEVRKVVEAVIGEQIAEHLEFYPSVLQSIFNKAQQAAK 367
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AAKRAR+LVR+KSVLRS SLPGKL+DCS++ P+ SEIF+VEGDSAGGSAKQGRDRRF
Sbjct: 368 AAEAAKRARELVRRKSVLRSGSLPGKLSDCSNSDPDISEIFLVEGDSAGGSAKQGRDRRF 427
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QA+LPLRGKILNVERKDE++MYKN EI +++ ALGLG+KG+DF + ALRY KI+ILTDAD
Sbjct: 428 QAVLPLRGKILNVERKDESSMYKNTEISSMVTALGLGLKGDDFDESALRYSKIVILTDAD 487
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER------GKQ-VQYCYDDAELK 471
VDGAHIRTLLLTF YRYQ+ LF+ G ++V VPPLYKVE GK+ + YCYD+ +L
Sbjct: 488 VDGAHIRTLLLTFLYRYQRALFERGKVFVAVPPLYKVEHTDGKGGGKRSITYCYDEVQLA 547
Query: 472 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
K+ SS P + SIQRFKGLGEMMP QLW TTLNPE R+LK+L ++DAAE N F LM
Sbjct: 548 KLLSSLPDDTKRSIQRFKGLGEMMPEQLWNTTLNPESRLLKRLTVDDAAEVNQTFQLLMS 607
Query: 532 ARVDTRKELIQ 542
+V R+ I+
Sbjct: 608 DKVAPRRAFIE 618
>gi|209525244|ref|ZP_03273786.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|423065151|ref|ZP_17053941.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
gi|209494259|gb|EDZ94572.1| DNA gyrase, B subunit [Arthrospira maxima CS-328]
gi|406713283|gb|EKD08454.1| DNA topoisomerase IV subunit B [Arthrospira platensis C1]
Length = 645
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 431/559 (77%), Gaps = 11/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTV RD Y Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVLRDHKRYVQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
T + H SK+ Q GT + F PD ++FTT I+F+++TIA R+RELA+LN + I L
Sbjct: 151 TEVKEH----SSKETQTGTSVCFKPDTKIFTTGIEFEYDTIASRLRELAYLNAGVRITLT 206
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R E E+ + Y + GG++EYV ++N +K+ LH D + + + + +++ALQWC
Sbjct: 207 DNRLELLKREEAKVESYCYEGGIKEYVTYMNREKQALHEDTIYVSGERNNVQVEVALQWC 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSDT+LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +KD + +L GE+VREG
Sbjct: 267 VDAYSDTILGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKDNEPNLGGENVREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTE+L+ +P+V D+IL K++ A
Sbjct: 327 LTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEFLDFNPNVADAILEKAIQA 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KAA AA+RARDLVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGGSAKQGRDR
Sbjct: 387 FKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGGSAKQGRDR 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYHK+II+TD
Sbjct: 447 RTQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPSQLRYHKVIIMTD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQ+ L D+G IY+ PPLYKVERG+ YCY++ +L++ +
Sbjct: 507 ADVDGAHIRTLLLTFFYRYQRELVDQGFIYIACPPLYKVERGRNHYYCYNEQQLQQQLAE 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R +K++ IEDAAEA+ +F+ LMG RV
Sbjct: 567 FPDNANYTIQRFKGLGEMMPNQLWDTTMNPETRSIKRVEIEDAAEADHIFTVLMGDRVAP 626
Query: 537 RKELIQNAANLVNLDHLDI 555
R++ I++ A +++ LDI
Sbjct: 627 RRQFIEDHAPRLDITDLDI 645
>gi|428203405|ref|YP_007081994.1| DNA gyrase subunit B [Pleurocapsa sp. PCC 7327]
gi|427980837|gb|AFY78437.1| DNA gyrase, B subunit [Pleurocapsa sp. PCC 7327]
Length = 642
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/556 (59%), Positives = 420/556 (75%), Gaps = 10/556 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE ++VTVWRD + Q+Y RG PV
Sbjct: 95 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVKVTVWRDNKVHTQRYERGIPV 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR- 120
T L + + ++R GT I F PD Q+FT I+FD++T+AGR++ELA+LN + I
Sbjct: 153 TELE---IKPEKEERTGTSITFLPDLQIFTGGIEFDYSTLAGRLKELAYLNAGVKITFSD 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
K S+P Y + GG++EYV ++ +K+PLH D++ + +GI +++A+QWC DA
Sbjct: 210 KRGSEP---HVETYCYEGGIKEYVAYMCREKQPLHQDIIYVSGEKNGIQLEVAMQWCVDA 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YSD +LG+AN+IRTIDGGTH+EG+K LTRTLN++ +K +KD + +L+GE+VREGLT
Sbjct: 267 YSDNLLGFANNIRTIDGGTHLEGLKTVLTRTLNNVARKRNKIKDNEPNLAGENVREGLTG 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP PEFEGQTKT+LGN EVR +VD E L EYLE HP V D+I+ K++ A KA
Sbjct: 327 VISVKVPEPEFEGQTKTKLGNTEVRGIVDSIAGEALNEYLEFHPQVADAIIEKAVQAFKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
A AA+RAR+LVR+KSVL SS LPGKLADCSS P ESEIF+VEGDSAGGSAKQGRDRRFQ
Sbjct: 387 AEAARRARELVRRKSVLESSPLPGKLADCSSRDPSESEIFLVEGDSAGGSAKQGRDRRFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I+I+TDAD
Sbjct: 447 AILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDASQLRYHRIVIMTDADS 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIRTLLLTFFYRYQ+ L D G IY+ PPLYK+ERG+ YCY D E ++ + FP+
Sbjct: 507 DGGHIRTLLLTFFYRYQRELVDRGFIYIACPPLYKIERGRNHYYCYSDREKAQIINQFPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
NA Y+IQRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ + + LMG RV R+E
Sbjct: 567 NANYTIQRFKGLGEMMPDQLWETTMNPETRTLKRVEIEDAAEADRICTVLMGDRVAPRRE 626
Query: 540 LIQNAANLVNLDHLDI 555
I+ + + LDI
Sbjct: 627 FIETHGSRLEFTDLDI 642
>gi|123969376|ref|YP_001010234.1| DNA gyrase subunit B [Prochlorococcus marinus str. AS9601]
gi|123199486|gb|ABM71127.1| DNA gyrase, subunit B [Prochlorococcus marinus str. AS9601]
Length = 655
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/557 (56%), Positives = 421/557 (75%), Gaps = 6/557 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG S GY VSGGLHGVG+SVVNALSE + VTV+RDG E++Q++ +G
Sbjct: 102 VLTVLHAGGKFG--SGGYKVSGGLHGVGISVVNALSEWVNVTVYRDGSEFNQRFEKGVSK 159
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L ++GT I F PDK +F+ I+F++ ++ R+RELA+LN + I R
Sbjct: 160 GELQAKK-QTGKPFKKGTSICFKPDKTIFSGGIEFEYALLSSRLRELAYLNGGVKIVFRD 218
Query: 122 EDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + + E Y + GG++EYV+++N +K +H +++ + + ++ ALQWCSD
Sbjct: 219 ERNQLSDGSFKEEIYLYQGGIKEYVEYMNAEKDSIHPEIIYVDSQKENVYVEAALQWCSD 278
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YSD +LG+AN+IRTIDGGTHIEG+K LTRT N+L KK KD + +L+GE++REGLT
Sbjct: 279 VYSDNILGFANNIRTIDGGTHIEGLKTVLTRTFNNLAKKRGKRKDIEKNLAGENIREGLT 338
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV+VP+PEFEGQTKT+LGN EVR +VD + E LT+Y+E +P +LD IL K++ +
Sbjct: 339 VVLSVKVPDPEFEGQTKTKLGNTEVRGIVDSLIGEALTKYMEFNPAILDLILEKAIQSFN 398
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEI+IVEGDSAGGSAKQGRDR F
Sbjct: 399 AAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIYIVEGDSAGGSAKQGRDRNF 458
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILN+E+ D+ +YKN EIQ+LI ALGLG+KGE+F + +LRYH+++I+TDAD
Sbjct: 459 QAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFDESSLRYHRVVIMTDAD 518
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPLYKVERGK YCY++ +LK F
Sbjct: 519 VDGAHIRTLLLTFFYRYQRELVEKGFIYIACPPLYKVERGKNHNYCYNENQLKDTIQGFG 578
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA Y+IQRFKGLGEMMP QLW+TT+NP+ RM+K++ IEDA EA+ +F+ LMG +V R+
Sbjct: 579 ENANYNIQRFKGLGEMMPKQLWDTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRR 638
Query: 539 ELIQNAANLVNLDHLDI 555
E I+ + +++ LDI
Sbjct: 639 EFIETHSGNLDMATLDI 655
>gi|428224467|ref|YP_007108564.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
gi|427984368|gb|AFY65512.1| DNA gyrase subunit B [Geitlerinema sp. PCC 7407]
Length = 646
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/561 (59%), Positives = 425/561 (75%), Gaps = 14/561 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + ++ RG P+
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRDRKVFKHRFERGVPI 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
++ P + R GT + F PD Q+FT I+FD+ +A R+RELA+LN + I+
Sbjct: 151 GEMSSEPYP---EARTGTSLTFMPDVQIFTGGIEFDYAILASRLRELAYLNGGVYISF-- 205
Query: 122 EDSDPEKNQYNE-----YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQW 175
DS E + NE Y + GG++EY+ +LN DK+P+H+ V+ + + +G+ ++++LQW
Sbjct: 206 TDSRLELLKSNEPKVEVYHYEGGIQEYIAYLNRDKQPIHEEVIYVQGEREGVQLEVSLQW 265
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
C DA++D +LG+AN+IRT+DGGTH+EG+KA LTRT+NS+ +K +K+ + +L GEH+RE
Sbjct: 266 CVDAFTDNLLGFANNIRTVDGGTHLEGLKAVLTRTMNSIARKRNRLKENESNLGGEHIRE 325
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+VP+PEFEGQTKT+LGN EVR +V+ V E LTEYL P V D+IL K++
Sbjct: 326 GLTGVISVKVPDPEFEGQTKTKLGNMEVRGIVESFVGEVLTEYLNFRPGVADAILEKAIQ 385
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A AA AA+RAR+LVR+KSVL SS+LPGKLADCSS ESEIFIVEGDSAGGSAKQGRD
Sbjct: 386 AYNAAEAARRARELVRRKSVLESSTLPGKLADCSSRDASESEIFIVEGDSAGGSAKQGRD 445
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGEDF LRYH+I+I+T
Sbjct: 446 RRFQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEDFDSSQLRYHRIVIMT 505
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VK 474
DADVDGAHIRTLLLTFFYRYQ++L ++G IY+ PPLYKVERG+ YCY D EL+ ++
Sbjct: 506 DADVDGAHIRTLLLTFFYRYQRSLVEQGYIYIACPPLYKVERGRSHYYCYSDRELQGLIQ 565
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
FP NA Y+IQRFKGLGEMMP QLWETT+NPE R LKQ+ IEDAAEA+ +F+ LMG RV
Sbjct: 566 REFPPNASYTIQRFKGLGEMMPTQLWETTMNPETRTLKQVEIEDAAEADRIFTILMGDRV 625
Query: 535 DTRKELIQNAANLVNLDHLDI 555
R+E I+ + +NL LDI
Sbjct: 626 APRREFIETYGSRLNLADLDI 646
>gi|409993293|ref|ZP_11276439.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
gi|291569892|dbj|BAI92164.1| DNA gyrase B subunit [Arthrospira platensis NIES-39]
gi|409935828|gb|EKN77346.1| DNA gyrase subunit B [Arthrospira platensis str. Paraca]
Length = 645
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 430/559 (76%), Gaps = 11/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTV RD Y Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVLRDHKRYVQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
T L H SK+ Q GT + F PD ++FTT I+F+++TIA R+RELA+LN + I L
Sbjct: 151 TELEEH----SSKESQTGTSVCFKPDTKIFTTGIEFEYDTIASRLRELAYLNAGVRITLT 206
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R E E+ + Y + GG++EYV ++N +K+ LH D + + + + +++ALQWC
Sbjct: 207 DNRLELLKREEAKVESYCYEGGIKEYVTYMNREKQALHEDTIYVSGERNNVQVEVALQWC 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSDT+LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +KD + +L GE+VREG
Sbjct: 267 VDAYSDTILGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKDNEPNLGGENVREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTE+L+ +P+V D+IL K++ A
Sbjct: 327 LTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEFLDFNPNVADAILEKAIQA 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KAA AA+RARDLVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGGSAKQGRDR
Sbjct: 387 FKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGGSAKQGRDR 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYHK+II+TD
Sbjct: 447 RTQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDSSQLRYHKVIIMTD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQ+ L +G IY+ PPLYKVERG+ YCY++ +L++ +
Sbjct: 507 ADVDGAHIRTLLLTFFYRYQRELVAQGFIYIACPPLYKVERGRNHYYCYNEQQLQQQLAE 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R +K++ IEDAAEA+ +F+ LMG RV
Sbjct: 567 FPDNANYTIQRFKGLGEMMPNQLWDTTMNPETRSIKRVEIEDAAEADHIFTVLMGDRVAP 626
Query: 537 RKELIQNAANLVNLDHLDI 555
R++ I++ A +++ LDI
Sbjct: 627 RRQFIEDHAPRLDITDLDI 645
>gi|376006244|ref|ZP_09783547.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
gi|375325373|emb|CCE19300.1| DNA gyrase subunit B [Arthrospira sp. PCC 8005]
Length = 645
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 430/559 (76%), Gaps = 11/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTV RD Y Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVLRDHKRYVQRYERGVPV 150
Query: 62 TTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
T L H SK+ Q GT + F PD ++FTT I+F+++TIA R+RELA+LN + I L
Sbjct: 151 TELEEH----SSKETQTGTSVCFKPDTKIFTTGIEFEYDTIASRLRELAYLNAGVRITLT 206
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R E E+ + Y + GG++EYV ++N +K+ LH D + + + + +++ALQWC
Sbjct: 207 DNRLELLKREEAKVESYCYEGGIKEYVTYMNREKQALHEDTIYVSGERNNVQVEVALQWC 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
DAYSDT+LG+AN+IRT+DGGTH+EG+K LTRT+N++ +K +KD + +L GE+VREG
Sbjct: 267 VDAYSDTILGFANNIRTVDGGTHLEGLKTVLTRTMNAIARKRNKIKDNEPNLGGENVREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTE+L+ +P+V D+IL K++ A
Sbjct: 327 LTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEFLDFNPNVADAILEKAIQA 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KAA AA+RARDLVR+KSVL SS LPGKLADCSS PEESEIF+VEGDSAGGSAKQGRDR
Sbjct: 387 FKAAEAARRARDLVRRKSVLESSPLPGKLADCSSRDPEESEIFLVEGDSAGGSAKQGRDR 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R QAILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYHK+II+TD
Sbjct: 447 RTQAILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDPSQLRYHKVIIMTD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRYQ+ L +G IY+ PPLYKVERG+ YCY++ +L++ +
Sbjct: 507 ADVDGAHIRTLLLTFFYRYQRELVAQGFIYIACPPLYKVERGRNHYYCYNEQQLQQQLAE 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP NA Y+IQRFKGLGEMMP QLW+TT+NPE R +K++ IEDAAEA+ +F+ LMG RV
Sbjct: 567 FPDNANYTIQRFKGLGEMMPNQLWDTTMNPETRSIKRVEIEDAAEADHIFTVLMGDRVAP 626
Query: 537 RKELIQNAANLVNLDHLDI 555
R++ I++ A +++ LDI
Sbjct: 627 RRQFIEDHAPRLDITDLDI 645
>gi|427418615|ref|ZP_18908798.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
gi|425761328|gb|EKV02181.1| DNA gyrase subunit B [Leptolyngbya sp. PCC 7375]
Length = 645
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/558 (57%), Positives = 427/558 (76%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ E+ Q+Y RG+
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWRNKKEHLQRYERGEAQ 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
L+ + + + GT + F PD+ +FT ++FD++T+AGR+RELA+LN + I
Sbjct: 151 GELS---VKSGADSQTGTSVSFKPDQLIFTETVEFDYSTLAGRLRELAYLNAGVDITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
R E ++ + N YF+ GG+ EYV+++N +K+P+H D++ + +G+ ++ ALQW
Sbjct: 208 HRLELLKADEPKINRYFYEGGIREYVEYINKEKQPIHPDIIYVTGEKNGVQVEAALQWSV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD ++G+AN+IRT+DGGTH+EG+KA LTRT+N+ +K KD + +L+GE++REGL
Sbjct: 268 DAYSDNLMGFANNIRTVDGGTHLEGLKAVLTRTMNNFARKRNKRKDNEPNLAGENIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP PEFEGQTKT+LGN EVR +VD + E L+EYL+ +P+V+DSIL K++ +
Sbjct: 328 TAVISVKVPEPEFEGQTKTKLGNTEVRGIVDSLIGETLSEYLDFNPNVVDSILEKAIQSF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RARDLVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 NAAEAARRARDLVRRKSVLESSTLPGKLADCSSRDPAESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D++ +YKN E+Q+LI ALGLG+KGE+F LRYH+I ++TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDSKIYKNNEVQSLITALGLGIKGEEFDSSQLRYHRICLMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYK+ERG+ YCY + EL++ S+
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALIDQGFVYIACPPLYKLERGRSHTYCYSEQELQRGISAL 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y++QRFKGLGEMMP QLW+TT+NPE R LK++ IEDAAEA +F+ LMG RV R
Sbjct: 568 PANAKYNVQRFKGLGEMMPTQLWDTTMNPESRTLKKVEIEDAAEAERIFTVLMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ +N+ LDI
Sbjct: 628 REFIETYGPKLNMADLDI 645
>gi|443318324|ref|ZP_21047579.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
gi|442782062|gb|ELR92147.1| DNA gyrase, B subunit [Leptolyngbya sp. PCC 6406]
Length = 646
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/559 (58%), Positives = 428/559 (76%), Gaps = 10/559 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+ ++ Q++ RG V
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWREQRKHTQRFERG--V 148
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA--- 118
+ +P D+ R+GT + F PD +FTT +F++ TI+ R+RELA+LN + +
Sbjct: 149 SMGDLQSVP-DNSGRRGTLVSFSPDATIFTTGTEFEYGTISNRLRELAYLNAGVDVTFTD 207
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
LR + ++ + +++ GG+ EYV ++N DK+PLH D++ + + DG+ ++ ALQWC
Sbjct: 208 LRLDVLKSDQPLVSRFYYEGGIREYVAYINNDKQPLHEDIIHVQSEKDGVQVEAALQWCV 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTH+EG+KA LTRTLN+L +K KD + +LSGE++REGL
Sbjct: 268 DAYSDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNTLARKRSKRKDGESNLSGENIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +V+ + E LTEYL+ HP++ D+IL K++ A
Sbjct: 328 TGVISVKVPDPEFEGQTKTKLGNTEVRGIVESVIGETLTEYLDFHPNIGDAILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDR+
Sbjct: 388 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPSESEIFIVEGDSAGGSAKQGRDRK 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN E+Q LI ALGLG+KGE+F LRYH+I ++TDA
Sbjct: 448 FQAILPLRGKILNIEKTDDAKIYKNTEVQALITALGLGIKGEEFDVSQLRYHRICLMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSS 476
DVDGAHIRTLLLTFFYRYQ+ L D+G +Y+ PPLYK+ERG+ YCY D E + +++
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRALIDQGYVYIACPPLYKIERGRNHWYCYSDRERDQLIQNE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
FP+NA Y+ QRFKGLGEMMP QLWETT+NPE R LK++ IEDAAEA+ +F+ LMG RV
Sbjct: 568 FPANANYTTQRFKGLGEMMPTQLWETTMNPESRTLKKVEIEDAAEADRIFTVLMGDRVAP 627
Query: 537 RKELIQNAANLVNLDHLDI 555
R+E I+ +NL+ LDI
Sbjct: 628 RREFIEKYGPRLNLEDLDI 646
>gi|428222103|ref|YP_007106273.1| DNA gyrase subunit B [Synechococcus sp. PCC 7502]
gi|427995443|gb|AFY74138.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7502]
Length = 646
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/555 (58%), Positives = 423/555 (76%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EV+VWR Y Q++ RG P+
Sbjct: 99 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVSVWRQDQIYTQRFERGFPI 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
LT + D+ R+GT++RF PD Q+F T FD T+AGR++ELA+LN + I
Sbjct: 157 GILTG--VKTDNP-RRGTQVRFKPDAQIFLTETTFDFTTLAGRLKELAYLNAGVYIQF-- 211
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+ + Y + GG+ EYV ++ +K+ +H D++ + D + +++ALQWCSDAY
Sbjct: 212 SDRRGEEPRSEVYQYEGGIREYVTYMTREKEAIHNDIIYVNGERDHVQVEVALQWCSDAY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+D +LG+AN+IRTIDGGTH+EG+K LTRT+N+ +K K +K+ D +L+GE+VREGLT +
Sbjct: 272 NDNILGFANNIRTIDGGTHLEGLKTVLTRTINANARKLKKLKEGDSNLAGENVREGLTAV 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP+PEFEGQTKT+LGNPEVR +VD V E L+EYLE HP + SI+ K++ + AA
Sbjct: 332 ISVKVPDPEFEGQTKTKLGNPEVRGIVDSFVGEVLSEYLEFHPAIAASIIDKAVQSFNAA 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KS L SS+LPGKLADCSS P ESE+FIVEGDSAGGSAKQGRDR FQA
Sbjct: 392 EAARRARELVRRKSALESSTLPGKLADCSSRDPRESEVFIVEGDSAGGSAKQGRDRHFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGK+LN+E+ +++ +YKN EIQ LI LG+G++GE+F LRYHKII+L DADVD
Sbjct: 452 ILPLRGKVLNIEKAEDSKIYKNAEIQALITGLGMGIRGEEFNLAQLRYHKIILLADADVD 511
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRYQ+ L D+G IY+G PPLYKVERGK +QYCY D EL+ ++FP+N
Sbjct: 512 GAHIRTLLLTFFYRYQRQLVDQGYIYIGCPPLYKVERGKSMQYCYSDRELQAHLATFPAN 571
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y+IQRFKGLGEMMP+QLW+TT+NP R LKQ+ IEDAAEA+ +F+ LMG RV R+E
Sbjct: 572 ANYNIQRFKGLGEMMPIQLWDTTMNPATRTLKQITIEDAAEADRIFTILMGDRVAPRREF 631
Query: 541 IQNAANLVNLDHLDI 555
I+ + +NL LDI
Sbjct: 632 IETYGSKLNLTDLDI 646
>gi|428205380|ref|YP_007089733.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
gi|428007301|gb|AFY85864.1| DNA gyrase subunit B [Chroococcidiopsis thermalis PCC 7203]
Length = 645
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/558 (58%), Positives = 419/558 (75%), Gaps = 9/558 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWRD + Q+Y RG P+
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWVEVTVWRDKKVHTQRYERGVPM 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
L + + GT +RF PD ++FT +FD+ T+AGR+RELA+LN + I
Sbjct: 151 GELQTKSF---KEAKTGTGVRFKPDAEIFTVGTEFDYITLAGRLRELAYLNAGVRITFTD 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCS 177
R E ++ + Y + GG+ EYV ++N DK+ LH+ + F + + + + +++ALQWC+
Sbjct: 208 HRLELLKSQEPKVETYEYKGGIREYVSYINNDKQALHEEIIFVQGERNNVQVEVALQWCT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAY+D +LG+AN+IRT+DGGTH+EG+K LTRTLN++ +K +KD + +LSGEHVREGL
Sbjct: 268 DAYTDNLLGFANNIRTVDGGTHLEGLKTVLTRTLNAIARKRNKIKDNEPNLSGEHVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE P + DSIL K++ A
Sbjct: 328 TAVISVKVPDPEFEGQTKTKLGNTEVRGIVDSLVGEVLTEYLEFRPSIADSILDKAIQAF 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KAA AA+ AR+LVR+KSVL SS LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 KAAEAARHARELVRRKSVLESSPLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLGVKGE+F LRYHKI+I+TDA
Sbjct: 448 NQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGVKGEEFDSSQLRYHKIVIMTDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ+ L ++G IY+ PPL+K+ERG+ YCY + E + + F
Sbjct: 508 DVDGAHIRTLLLTFFYRYQRQLIEQGFIYIACPPLFKIERGRNHYYCYSERERDQKIAEF 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+NA Y+IQRFKGLGEMMP QLW+TT+N E R LK++ IEDAAEA+ +F+ LMG RV R
Sbjct: 568 PANANYTIQRFKGLGEMMPQQLWDTTMNNETRTLKRVEIEDAAEADRIFTVLMGDRVAPR 627
Query: 538 KELIQNAANLVNLDHLDI 555
+E I+ + +NL LDI
Sbjct: 628 REFIETYGSRLNLVELDI 645
>gi|307154719|ref|YP_003890103.1| DNA gyrase subunit B [Cyanothece sp. PCC 7822]
gi|306984947|gb|ADN16828.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7822]
Length = 640
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 329/555 (59%), Positives = 421/555 (75%), Gaps = 8/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE + VTVWRD + Q+Y RG PV
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVNVTVWRDQKRFTQRYERGIPV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T+L ++ GT + F PD Q+F+ I+FD++T+AGR+RELA+LN + I
Sbjct: 151 TSLESQP---ETDHSTGTSVSFLPDTQIFSDGIEFDYSTLAGRLRELAYLNAGVRITF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
D E+ + Y + GG++EYV ++ +K+PLH+ ++ + + +GI I++ALQW D Y
Sbjct: 206 SDKRLEQPRVESYCYEGGIKEYVAYMCREKQPLHEEIIYVQGERNGIQIEVALQWYIDTY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+D +LG+AN+IRTIDGGTH+EG+KA LTRTLN++ +K +K+ + +L+GE+VREGLT +
Sbjct: 266 NDNLLGFANNIRTIDGGTHLEGLKAVLTRTLNNVARKRNKIKENEPNLAGENVREGLTGV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE HP + DSI+ K++ A KAA
Sbjct: 326 ISVKVPEPEFEGQTKTKLGNTEVRGIVDSLVGEVLGEYLEFHPQIADSIIEKAVQAFKAA 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KSVL SS LPGKLADCS P +SEIFIVEGDSAGGSAKQGRDRR QA
Sbjct: 386 EAARRARELVRRKSVLESSPLPGKLADCSERDPAKSEIFIVEGDSAGGSAKQGRDRRSQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILN+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+III+TDAD D
Sbjct: 446 ILPLRGKILNIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDAAQLRYHRIIIMTDADYD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYRYQ+++ D+G IY+ PPLYKVERGK +YCY++ EL++ S P N
Sbjct: 506 GSHIRTLLLTFFYRYQRSIVDQGYIYIACPPLYKVERGKNHRYCYNERELQQYISELPPN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A YSIQRFKGLGEMMP QLWETT+NPE R+LKQ+ IEDAA+A +F+ LMG RV R+E
Sbjct: 566 ANYSIQRFKGLGEMMPQQLWETTMNPETRLLKQVEIEDAAKAEELFTILMGDRVLPRREF 625
Query: 541 IQNAANLVNLDHLDI 555
I+ + L LDI
Sbjct: 626 IETHGPRLKLTDLDI 640
>gi|384252438|gb|EIE25914.1| type II DNA topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 744
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 327/565 (57%), Positives = 421/565 (74%), Gaps = 14/565 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SGYSVSGGLHGVG+SVVNALSE L VTVWR G E+ Q Y +G+P+
Sbjct: 183 VLTVLHAGGKFGGQGSGYSVSGGLHGVGISVVNALSEQLHVTVWRQGKEFQQSYRQGRPM 242
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L LP + GT+++F DK VF + D TI R++ELAFLN TI R
Sbjct: 243 TELLEAQLPKKDSKKSGTQVKFLYDKDVFAKGVTMDPKTIRTRLQELAFLNSNATIWFRT 302
Query: 122 EDSD-----------PEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 170
+S P + ++ + F GGL EYV++LN D +P+H+ + + VDG+ ++
Sbjct: 303 IESGSAPSNGNGASPPPEPEWEKLHFDGGLCEYVKYLNRDSQPMHEPIFVTEKVDGVVVE 362
Query: 171 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 230
+ALQWCSD +SD ++G+ NS++TIDGGTHI+G+KA+LTRTLN+LG+K+K +K+ + +L+G
Sbjct: 363 VALQWCSDTFSDLLIGFVNSVKTIDGGTHIDGLKAALTRTLNTLGRKTKALKENEANLAG 422
Query: 231 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 290
+H+REGL+C+ISV+VP PEFEGQTKTRLGNPEVRK+VD V + + E LE+ L +L
Sbjct: 423 DHIREGLSCVISVKVPEPEFEGQTKTRLGNPEVRKIVDACVAKGIMESLEMDTATLGLVL 482
Query: 291 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 350
K+++A +AA AAK+AR+LVR+KS+L S+LPGKL+DC+ST SEIF+VEGDSAGGSA
Sbjct: 483 GKAVAAWRAAEAAKKARELVRRKSLLTKSTLPGKLSDCTSTDKALSEIFVVEGDSAGGSA 542
Query: 351 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 410
KQ RDRRFQA+LPLRGKILNVERKD+AA+YKN EI NLI ALGLG+KGE+ LRY K
Sbjct: 543 KQARDRRFQAVLPLRGKILNVERKDDAALYKNNEISNLIVALGLGLKGEEMPN--LRYGK 600
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
+I+LTDADVDGAHIRTLLLTF +RY + LFD G IYVGVPPLYK+E G+ Y Y + EL
Sbjct: 601 VILLTDADVDGAHIRTLLLTFLFRYARDLFDRGHIYVGVPPLYKLEVGRSSVYLYSEGEL 660
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
S + Y++QRFKGLGEMMP QLW TTLNP RMLK+L + DAAEA+ +F+ LM
Sbjct: 661 SARTQGLASGS-YTVQRFKGLGEMMPDQLWHTTLNPATRMLKRLTVNDAAEASHLFALLM 719
Query: 531 GARVDTRKELIQNAANLVNLDHLDI 555
G +V+ R+ LIQ + L+ LDI
Sbjct: 720 GDKVEPRRALIQAHGASLALEDLDI 744
>gi|37522075|ref|NP_925452.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
gi|35213074|dbj|BAC90447.1| DNA gyrase subunit B [Gloeobacter violaceus PCC 7421]
Length = 644
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 303/536 (56%), Positives = 391/536 (72%), Gaps = 10/536 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG +VVNALS L T+WR+G +Y Q++ RG P L + DS+ R+GT I F
Sbjct: 114 LHGVGAAVVNALSTILTATIWREGKQYIQRFHRGIPEGGL---AVSSDSQKRRGTMISFL 170
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FTT + FD +T+ R RELAFLN + R D E + Y + GG+ EYV
Sbjct: 171 PDPEIFTTGVDFDFDTLLSRFRELAFLNAG--VEFRFSDLRGETERTESYIYEGGIREYV 228
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+++ +K LH D++ ++ DG++++ ALQW +D Y+D +LG+AN+IRTIDGGTH+EG+
Sbjct: 229 KYMTREKAALHPDIIFINQERDGVSVECALQWSTDVYNDNVLGFANNIRTIDGGTHLEGL 288
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA LTRT NS +K+ +KD D +L+GEHVREGLT ++SV+VPNPEFEGQTKT+LGNPEV
Sbjct: 289 KAVLTRTFNSFARKANKLKDGDKNLTGEHVREGLTAVLSVKVPNPEFEGQTKTKLGNPEV 348
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD + E LTEYLE HPDV+ SIL K+L +++A AA++ARDLVR+KS L SS+LPG
Sbjct: 349 RGIVDGVISEKLTEYLEFHPDVVASILEKALQSMQAEEAARKARDLVRRKSALESSTLPG 408
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC S P ESE+F+VEGDSAGGSAKQGRDRRFQAILPLRGKILN+ER D+ +Y N
Sbjct: 409 KLADCQSRDPAESEVFLVEGDSAGGSAKQGRDRRFQAILPLRGKILNIERADDRKIYGNN 468
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EIQ +I LGLG+K E+F LRYH+III+TDADVDGAHIRTLLLTFFYRY++ L ++G
Sbjct: 469 EIQAMITGLGLGLKTEEFDVGRLRYHRIIIMTDADVDGAHIRTLLLTFFYRYKRDLVEQG 528
Query: 444 CIYVGVPPLYKVE----RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
IY+ PPLYK+ R V+YCY + E + + N Y +QRFKGLGEM QL
Sbjct: 529 YIYIAQPPLYKISIGGGRNIDVRYCYSEQEKEAILRGLRENQKYELQRFKGLGEMQADQL 588
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
WETT+NPE R L+Q+ IEDAAEA+ VF+ LMG RV+ R+E I+ + + LDI
Sbjct: 589 WETTMNPETRTLRQVTIEDAAEADRVFNILMGDRVEPRREFIETYGPRLQMADLDI 644
>gi|284928768|ref|YP_003421290.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
gi|284809227|gb|ADB94932.1| DNA gyrase subunit B [cyanobacterium UCYN-A]
Length = 642
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 321/557 (57%), Positives = 421/557 (75%), Gaps = 12/557 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE L + VWRD Y Q+Y G V
Sbjct: 95 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEWLIIKVWRDNSVYTQRYECGVAV 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L D++ +GT + F PDKQ+FT+ FD+ T++ R+RELA+LN ++TI
Sbjct: 153 SELKKEP---DTEHPKGTSVSFLPDKQIFTSDTNFDYATLSARLRELAYLNSQITIKF-- 207
Query: 122 EDSDPEKNQ-YNE-YFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
+D K + Y+E YF+ GGL EYV ++ +K+ LH D++ + G+ ++ AL WC D
Sbjct: 208 --TDYRKQEPYSETYFYEGGLREYVTYMCRNKEALHKDIIYICGEKKGVQVEAALLWCID 265
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
AYSD +LG+AN+IRTIDGGTH+EG+K LTRT+N++ +K +K+ + +LSGE+VREGLT
Sbjct: 266 AYSDNLLGFANNIRTIDGGTHLEGLKTVLTRTMNNVARKRNKIKENEPNLSGENVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+SV+VP PEFEGQTKT+LGN EVR +VD V E L EYLE +P V D I+ K++ A K
Sbjct: 326 GIVSVKVPEPEFEGQTKTKLGNTEVRGIVDLLVGEVLGEYLEFNPHVGDIIIEKAVQAFK 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
AA AA+RARDLVR+KSVL SS LPGKLADCS+ P E+EIF+VEGDSAGGSAKQGRDRRF
Sbjct: 386 AAEAARRARDLVRRKSVLESSPLPGKLADCSTRDPAEAEIFLVEGDSAGGSAKQGRDRRF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKI+N+E+ D+A +YKN EIQ+LI ALGLG+KGE+F LRYH+I+I+TDAD
Sbjct: 446 QAILPLRGKIINIEKTDDAKIYKNNEIQSLITALGLGIKGEEFDVSQLRYHRIVIMTDAD 505
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTL+LTFFYRYQ+ L ++G IY+ PPLYK+ERG+ YCY++ +L+ + P
Sbjct: 506 VDGAHIRTLILTFFYRYQRLLIEQGFIYIACPPLYKIERGRNHSYCYNEQQLQDNIKALP 565
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+NA Y+IQRFKGLGEMMPVQLW TT+NPE R +K++ I+DA EA+ +F+ LMG +V R+
Sbjct: 566 ANAKYTIQRFKGLGEMMPVQLWNTTMNPETRSMKRVEIDDAVEADRIFTILMGDKVAPRR 625
Query: 539 ELIQNAANLVNLDHLDI 555
+ I+N + +NL+ LDI
Sbjct: 626 QFIENYGSKLNLNDLDI 642
>gi|86606189|ref|YP_474952.1| DNA gyrase subunit B [Synechococcus sp. JA-3-3Ab]
gi|86554731|gb|ABC99689.1| DNA gyrase, B subunit [Synechococcus sp. JA-3-3Ab]
Length = 642
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 317/556 (57%), Positives = 418/556 (75%), Gaps = 8/556 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE LE VWR+G Y Q++ RG V
Sbjct: 93 VMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWLEARVWREGKVYFQRFERGAVV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P ++ R+GT +RF PD+ +F +FD++ +A R+RELA+LN L I
Sbjct: 151 GSLQSEPQPAGAQ-RRGTEVRFKPDELIFPER-EFDYSLLAARLRELAYLNAGLKIIFSD 208
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
DP + Y FAGG++EYV ++N +K P+H D++ R + DG+ ++ ALQWC+D Y
Sbjct: 209 LRRDPPHREV--YQFAGGIKEYVAFINHEKTPIHPDIIYVRGERDGVEVEAALQWCADVY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+DT++G+AN+IRT +GGTH+EG+K +LT T+NS +K +KD D +L+GE+VREGLT I
Sbjct: 267 TDTLIGFANNIRTTEGGTHLEGLKTALTLTINSQARKLNKLKDSDSNLAGENVREGLTAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
++V+VPNPEFEGQTKT+LGN EVR +V V E LTEYLE +P+V I+ K++ + AA
Sbjct: 327 LAVKVPNPEFEGQTKTKLGNTEVRGIVQTLVSEALTEYLEFNPNVARGIVEKAIQSFNAA 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KS L SS+LPGKLADCS P ESE+++VEGDSAGGSAKQGRDR+FQA
Sbjct: 387 EAARRARELVRRKSALESSTLPGKLADCSCRDPAESEVYLVEGDSAGGSAKQGRDRQFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKILN+E+ D A +YKN EIQ +I ALGLGVKGE+F LRYH+II++TDADVD
Sbjct: 447 VLPLRGKILNIEKADPAKIYKNAEIQAMITALGLGVKGEEFDPSQLRYHRIILMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QVQYCYDDAELKKVKSSFPS 479
G+HIRTLLLTFFYRYQK L ++G +Y+ PPLYK+E G+ V+YCY++AE ++V S P+
Sbjct: 507 GSHIRTLLLTFFYRYQKALLEQGYVYIACPPLYKIEWGRNNVRYCYNEAEKEQVLRSLPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQRFKGLGEMMP QLWETT+NP R+LKQ+ IEDAAEA+ +F+ LMG V R+E
Sbjct: 567 NTKYTIQRFKGLGEMMPEQLWETTMNPATRVLKQITIEDAAEADRIFTILMGDAVGPRRE 626
Query: 540 LIQNAANLVNLDHLDI 555
I+ + ++L LDI
Sbjct: 627 FIEAHSAQLDLAALDI 642
>gi|145344184|ref|XP_001416617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576843|gb|ABO94910.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 662
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 316/552 (57%), Positives = 412/552 (74%), Gaps = 4/552 (0%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG SSGY VSGGLHGVG+SVVNALSE +EVTVWR+G EY Q +SRG +
Sbjct: 112 VLTILHAGGKFGGDSSGYHVSGGLHGVGISVVNALSELVEVTVWRNGNEYIQSFSRGIAL 171
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ S ++GT IRF PD Q+F ++FD I R++ELAFLN + LR
Sbjct: 172 GPMQEKKQD-GSGQKKGTMIRFKPDDQIFD-KVKFDPTIIRTRMKELAFLNSGTELHLRT 229
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
D ++ + + FA GL++YV L +D LH+ + F +DG+ ++ AL W +D+YS
Sbjct: 230 FDKKTKEYEDEKLLFAEGLKDYVLDLTSDATRLHEPITFSGTMDGVRVEGALCWTADSYS 289
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DT+LGYANSIRT DGGTH++G+K SLT+TLN + +K+K +KD D +L G+H+REGL+ +I
Sbjct: 290 DTLLGYANSIRTTDGGTHLDGLKYSLTKTLNVVSRKAKLLKDSDPNLGGDHIREGLSGVI 349
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
+V VP PEFEGQTKTRLGN EVR++V+ + + ++E +P VL SI +K+ SA KAA
Sbjct: 350 AVWVPEPEFEGQTKTRLGNSEVRRIVENIANDAVAGHMEFNPSVLKSIFAKAQSAFKAAE 409
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR++VR+K+VL S+ LPGKL+DCSS+ +++EIF+VEGDSAGGS KQGRDR FQA+
Sbjct: 410 AAKRAREMVRRKTVLTSNRLPGKLSDCSSSDADQTEIFLVEGDSAGGSCKQGRDRGFQAV 469
Query: 362 LPLRGKILNVERK-DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
LPLRGKI+NVERK D AA+YKN EI N+I ALGLG GED ALRY KIIILTDADVD
Sbjct: 470 LPLRGKIMNVERKLDAAALYKNTEITNMISALGLGGMGEDLDTTALRYSKIIILTDADVD 529
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF YRYQ+ LF++G +Y VPPLYKV GK+ YCYD+ +L++V S P
Sbjct: 530 GAHIRTLLLTFLYRYQRDLFEKGYVYAAVPPLYKVVVGKKETYCYDEDDLQEVLVSLPEG 589
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
IQRFKGLGEMMP QLW TTLNP+ R+LK+L ++DA+ AN +FS+LM V+ R++L
Sbjct: 590 GAKHIQRFKGLGEMMPEQLWSTTLNPKTRVLKRLTVDDASAANHMFSTLMSKDVEPRRKL 649
Query: 541 IQN-AANLVNLD 551
I + + L ++D
Sbjct: 650 ITDEGSTLASID 661
>gi|86607821|ref|YP_476583.1| DNA gyrase subunit B [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556363|gb|ABD01320.1| DNA gyrase, B subunit [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 642
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 318/556 (57%), Positives = 414/556 (74%), Gaps = 8/556 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+G Y Q++ RG V
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWVEVTVWREGKVYFQRFERGAVV 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+L P S +R+GT +RF PD +F +FD+ +A R RELA+LN L I
Sbjct: 151 GSLKSEPQPKGS-NRRGTEVRFKPDGLIFPER-EFDYAVLAARFRELAYLNAGLKITFSD 208
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
DP + Y +AGG++EYV ++N +K P+H D++ + + DG+ +++ALQWCSD Y
Sbjct: 209 LRRDPPHCE--TYQYAGGIKEYVAFINHEKTPIHSDIIYIQGERDGVEVEVALQWCSDVY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+DT++G+AN+IRT +GGTH+EG+K SLT T+NS +K +KD D +L+GE+VREGLT I
Sbjct: 267 TDTLIGFANNIRTNEGGTHLEGLKTSLTLTINSQARKLNKLKDSDSNLAGENVREGLTAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VPNPEFEGQTKT+LGN EVR +V V E LTEYLE +P+V I+ K++ + AA
Sbjct: 327 VSVKVPNPEFEGQTKTKLGNTEVRGIVQTLVSEALTEYLEFNPNVARGIVDKAIQSFNAA 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RAR+LVR+KS L SS+LPGKLADCS P ESE+++VEGDSAGGSAKQGRDR+FQA
Sbjct: 387 EAARRARELVRRKSALESSTLPGKLADCSCRDPAESEVYLVEGDSAGGSAKQGRDRQFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKILN+E+ D A +YKN EIQ +I ALGLGVKG++F LRYH+II++TDADVD
Sbjct: 447 VLPLRGKILNIEKADPAKIYKNAEIQAMITALGLGVKGDEFDPSQLRYHRIILMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK-QVQYCYDDAELKKVKSSFPS 479
G+HIRTLLLTFFYRYQK L ++G +Y+ PPLYK+E G+ V+YCY DAE ++ P+
Sbjct: 507 GSHIRTLLLTFFYRYQKALLEQGYVYIACPPLYKIEWGRNNVRYCYSDAEKDQILRGLPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
NA Y+IQRFKGLGEMMP QLWETT+NP R LKQ+ IEDA EA+ +F+ LMG V R+E
Sbjct: 567 NAKYTIQRFKGLGEMMPEQLWETTMNPATRTLKQITIEDAVEADRIFTILMGDAVGPRRE 626
Query: 540 LIQNAANLVNLDHLDI 555
I+ + ++L LDI
Sbjct: 627 FIEAHSAHLDLAALDI 642
>gi|19909557|dbj|BAB86974.1| DNA gyrase subunit B [Synechococcus elongatus PCC 6301]
Length = 545
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 303/499 (60%), Positives = 386/499 (77%), Gaps = 9/499 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG S LHGVG+SVVNALSE +EVTVWR+G + Q++ +G P+
Sbjct: 52 VLTILHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEYVEVTVWREGKTHQQRFEQGNPI 109
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L V P D+ DR+GT++RF PD +F+ +FD+ T+A R++ELA+LN + I
Sbjct: 110 GEL--QVAP-DADDRRGTQVRFKPDATIFSETTEFDYGTLASRLKELAYLNAGVRIDFTD 166
Query: 122 EDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E KN Y+F GG+ EYV ++NTDK+ LH +++ + + DG+ ++ ALQWC
Sbjct: 167 ERLQLTKNHEPHQETYYFEGGIREYVAYMNTDKQALHSEIIFVQSEKDGVQVEAALQWCV 226
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYSD +LG+AN+IRTIDGGTHIEG+K LTRT+N++ +K KD D +LSGE++REGL
Sbjct: 227 DAYSDNILGFANNIRTIDGGTHIEGLKTVLTRTMNTIARKRNKRKDADNNLSGENIREGL 286
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+SV+VP+PEFEGQTKT+LGN EVR +VD V E LTEYLE HP V D IL K++ A
Sbjct: 287 TAIVSVKVPDPEFEGQTKTKLGNTEVRGIVDTLVGETLTEYLEFHPSVADLILEKAIQAF 346
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
AA AA+RAR+LVR+KSVL SS+LPGKLADCSS P ESEIFIVEGDSAGGSAKQGRDRR
Sbjct: 347 NAAEAARRARELVRRKSVLESSTLPGKLADCSSRDPGESEIFIVEGDSAGGSAKQGRDRR 406
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILN+E+ D+A +YKN EIQ LI ALGLG+KGE+F LRYH+I+I+TDA
Sbjct: 407 FQAILPLRGKILNIEKTDDAKIYKNTEIQALITALGLGIKGEEFDASQLRYHRIVIMTDA 466
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRYQ++L ++G +Y+ PPLYK+ERG+ YCY++ EL++ ++F
Sbjct: 467 DVDGAHIRTLLLTFFYRYQRSLLEQGYMYIACPPLYKLERGRNHYYCYNERELQERIATF 526
Query: 478 PSNALYSIQRFKGLGEMMP 496
P NA Y+IQRFKGLGEMMP
Sbjct: 527 PENANYTIQRFKGLGEMMP 545
>gi|307105660|gb|EFN53908.1| hypothetical protein CHLNCDRAFT_48978 [Chlorella variabilis]
Length = 663
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 313/574 (54%), Positives = 408/574 (71%), Gaps = 39/574 (6%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SSGYSVSGGLHGVGLSVVNALS+ LEV+VWR ++ Q++SRG
Sbjct: 109 VLTVLHAGGKFGGDSSGYSVSGGLHGVGLSVVNALSDELEVSVWRGRSQFSQRFSRGVAQ 168
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-------------TAIQFDHNTIAGRIREL 108
+ L ++GTR+RF D +F+ + FD +TI R+REL
Sbjct: 169 SPL-VEAPAAAGAPKRGTRVRFIYDDTIFSKTHTSPRPPLLPHCSATFDPDTIRSRLREL 227
Query: 109 AFLNPKLTIALRKEDSDPEKNQYNE-------YFFAGGLEEYVQWLNTDKKPLHDVVGFR 161
AFLN + TI R + E + ++GGL EYV++LN DK P+H+ + F
Sbjct: 228 AFLNSRATIYFRAGNGSSNGAAAAEAEPDWEVFHYSGGLAEYVRFLNRDKVPIHEPLCFS 287
Query: 162 KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 221
K G+ DT++G+ NSI+TIDGGTHI+G KA+LTRT+NSLG+K K +
Sbjct: 288 KQASGLR-----------RGDTIIGFVNSIKTIDGGTHIDGTKAALTRTVNSLGRKLKAI 336
Query: 222 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 281
K+ + +L+GE++REGL ++SV+VPNPEFEGQTKTRLGNPEVR++V+ V + E LE+
Sbjct: 337 KEGESNLAGEYIREGLGAVVSVKVPNPEFEGQTKTRLGNPEVRRIVEGVVSSAVGEALEM 396
Query: 282 HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 341
P ++IL+K++ A KAA AAK+AR+LVR+KSVL S+LPGKLADCSST E+EIF+V
Sbjct: 397 EPTTFNTILAKAMQAFKAAEAAKKARELVRRKSVLTKSTLPGKLADCSSTNRAETEIFLV 456
Query: 342 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 401
EGDSAGGS KQ RDRR+QA+LPLRGKILN D++ +YKN EI NLI LGLG+KGED
Sbjct: 457 EGDSAGGSTKQARDRRYQAVLPLRGKILN----DDSKLYKNNEIANLIVGLGLGLKGEDA 512
Query: 402 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 461
LRY KIIILTDADVDGAHIRTLLLTF +RYQ+ +F++G +YVGVPPLYK++ G++
Sbjct: 513 VN--LRYGKIIILTDADVDGAHIRTLLLTFLFRYQRAIFEKGHVYVGVPPLYKLDVGRRA 570
Query: 462 QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 521
QYCY + ELK + + Y++QRFKGLGEMMP QLW TTLNPE R L++L I+DAAE
Sbjct: 571 QYCYTEEELKAALAELAPCS-YTMQRFKGLGEMMPEQLWSTTLNPETRTLRKLTIDDAAE 629
Query: 522 ANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
A+ +F+ LMG +V R+ELI+ + + L+ LDI
Sbjct: 630 ASHMFALLMGDKVGPRRELIERHGSRLALEELDI 663
>gi|308801547|ref|XP_003078087.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
gi|116056538|emb|CAL52827.1| putative DNA gyrase B subunit (ISS) [Ostreococcus tauri]
Length = 684
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 306/553 (55%), Positives = 404/553 (73%), Gaps = 20/553 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDG-MEYHQKYSRGKP 60
++T+LHAGGKFGG SSGY VSGGLHGVG+SVVNALSE +EVTV G M+ Q+ G
Sbjct: 148 VLTILHAGGKFGGDSSGYHVSGGLHGVGISVVNALSELVEVTVHATGNMKEKQQDGSG-- 205
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+++GT +RF PD Q+F ++FD+N I R++ELAFLN + L+
Sbjct: 206 --------------NKKGTMVRFKPDDQIFD-KVKFDNNIIRTRMKELAFLNKGTELHLK 250
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
++ + + +A GL++YV L D LH+ + F +++GI ++ +L W +D+Y
Sbjct: 251 TFNTKTKSYVEEKLVYAEGLKDYVLDLTADATRLHEPITFSGEMEGIRVEGSLCWTADSY 310
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SDT+LGYANSIRTIDGGTHI+G+K SLT+T+N+ +K+K +KD D +L G+HVREGL+ +
Sbjct: 311 SDTLLGYANSIRTIDGGTHIDGLKYSLTKTINNASRKAKLLKDADSNLGGDHVREGLSGV 370
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
I+V VP PEFEGQTKTRLGN EVR++V+ + + + E + L ++ +K+ SA KAA
Sbjct: 371 IAVWVPEPEFEGQTKTRLGNSEVRRIVENIASDAVMGHFEFNSADLKAVFAKAQSAFKAA 430
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRAR+LVR+K+VL ++ LPGKL+DCSS+ + +EIF+VEGDSAGGS KQGRDR FQA
Sbjct: 431 EAAKRARELVRRKTVLTANRLPGKLSDCSSSDADRTEIFLVEGDSAGGSCKQGRDRSFQA 490
Query: 361 ILPLRGKILNVERK-DEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
+LPLRGKI+NVERK D AA+YKN EI N+I ALGLG GED ALRY KIIILTDADV
Sbjct: 491 VLPLRGKIMNVERKLDAAALYKNTEITNMISALGLGTMGEDLDTSALRYSKIIILTDADV 550
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YRYQ+ LF++G +Y VPPLYKV GK+ YCYDD +L++V ++ P
Sbjct: 551 DGAHIRTLLLTFLYRYQRDLFEKGFVYAAVPPLYKVAVGKKETYCYDDDDLQRVLAALPE 610
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A IQRFKGLGEMMP QLW TTL+P+ R+LK+L ++DA+ AN +FS+LM VD R+
Sbjct: 611 GANKHIQRFKGLGEMMPEQLWSTTLDPKTRLLKRLTVDDASAANHMFSTLMSKEVDPRRR 670
Query: 540 LI-QNAANLVNLD 551
LI + A L ++D
Sbjct: 671 LIEEEGAALASID 683
>gi|302830013|ref|XP_002946573.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
gi|300268319|gb|EFJ52500.1| hypothetical protein VOLCADRAFT_79115 [Volvox carteri f.
nagariensis]
Length = 676
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 305/576 (52%), Positives = 405/576 (70%), Gaps = 25/576 (4%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SGY VSGGLHGVG+SVVNALSE L VTVWR G+ Y Q+YSRG +
Sbjct: 104 VLTVLHAGGKFGGEDSGYKVSGGLHGVGISVVNALSEQLTVTVWRAGVRYSQRYSRGVAL 163
Query: 62 TTLTCHVLPVDSK--DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ L DS+ DR GT++ F D+ +F + + ++ + IA R+ ELAFLN T+
Sbjct: 164 EEVQRTELQPDSEEADRTGTQVCFLYDRTIFASDVSYNPDIIATRLHELAFLNSSATMRF 223
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD--VDGITIDLALQWCS 177
++ + F+GGL E+V L + PLH+ + + G+ + ALQW +
Sbjct: 224 NATRKGQLDGEWQVFQFSGGLREFVGCLQSGYTPLHEAICVSRSDPPSGVVVHAALQWAA 283
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D++ + + G+ANSI T DGGTH++ ++++LTRT+ +L KK K +K+ D LSGEH+REGL
Sbjct: 284 DSFREEIRGFANSIHTADGGTHLDALRSALTRTITALAKKMKLIKEGDPPLSGEHIREGL 343
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
+I+V+VPNPEFEGQTKTRLGNPEVRK+V+ +V E + E+LE HP L ++L K+L+A
Sbjct: 344 GAVIAVQVPNPEFEGQTKTRLGNPEVRKIVEATVAEAVGEWLEAHPADLSALLGKALTAA 403
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+AA AA++AR+L+R+K+ L S LPGKLADC+S + +EI++VEGDSAGGSAKQ RDRR
Sbjct: 404 RAADAARKARELIRRKTSLSRSMLPGKLADCTSEERDRTEIYLVEGDSAGGSAKQARDRR 463
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG-------------VKGEDFKKE 404
FQA+LPL+GKILNVER AAMYKN EI +LI ALGLG V D +
Sbjct: 464 FQAVLPLKGKILNVERVAGAAMYKNAEISSLIVALGLGTDRAPALATRGPDVAVRDTASK 523
Query: 405 ALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 464
AL Y KI+ILTDADVDGAHIR LLLTF +RY+ LF G +YV VPPLYKVERG+ + +
Sbjct: 524 ALEYGKIVILTDADVDGAHIRALLLTFLFRYRPQLFYAGHVYVAVPPLYKVERGRSLWWA 583
Query: 465 YDDAELKKVKSSFPSNAL----YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 520
+ + EL++V S N L YS+QRFKGLGEMMP QLW+TTLNP R+L++L + DAA
Sbjct: 584 HTEEELRRVVS---ENRLAPGGYSVQRFKGLGEMMPQQLWDTTLNPATRLLRRLTVRDAA 640
Query: 521 EANVVFSSLMGARVDTRKELIQNAAN-LVNLDHLDI 555
EA+ + +SLMGA+V RK LIQ +N L ++ LD+
Sbjct: 641 EADALLTSLMGAQVGPRKALIQEYSNRLQSISSLDV 676
>gi|159464611|ref|XP_001690535.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
gi|158280035|gb|EDP05794.1| DNA gyrase subunit B-like protein [Chlamydomonas reinhardtii]
Length = 649
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/569 (55%), Positives = 410/569 (72%), Gaps = 18/569 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG +SGY VSGGLHGVG+SVVNALS LEVTVWR G Y Q+YSRG P+
Sbjct: 84 VLTVLHAGGKFGGDNSGYKVSGGLHGVGISVVNALSSELEVTVWRAGSRYSQRYSRGAPL 143
Query: 62 TTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
L +LP S++ R GT++RF D +F + + + IA R+ ELAFLN + TI
Sbjct: 144 EELRVQLLPPGSEEAGRSGTQVRFLYDASIFAKDVAYSADVIATRLHELAFLNARATIRF 203
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCS 177
R + Q+ + ++GGL E+V L PLH+ VV G+ ++ ALQW +
Sbjct: 204 RALRRGKPEGQWQVFQYSGGLREFVGCLQAAYTPLHEALVVTRADGGSGVVVEAALQWAA 263
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D++ + + G+ANSI T+DGGTH+EG++A LTR + LG+K+K +KD D LSGEHVREGL
Sbjct: 264 DSFKEEVRGFANSIHTVDGGTHMEGLRAGLTRAVTQLGRKAKQIKDSDPPLSGEHVREGL 323
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
++SV+VPNPEFEGQTKTRLGNPEVRK+V+ +V E + E+LE HP L ++ +K+L++
Sbjct: 324 GAVVSVKVPNPEFEGQTKTRLGNPEVRKIVENAVYEAVGEWLEAHPAALAALCAKALTSA 383
Query: 298 KAALAAKRARDLVRQKSVLRS--SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+AA AA++AR+LVR+K+ L + S+LPGKLADC+ST EE+EI+IVEGDSAGGSAKQ RD
Sbjct: 384 RAAEAARKARELVRRKTSLFTGRSTLPGKLADCTSTNREETEIYIVEGDSAGGSAKQARD 443
Query: 356 RRFQAILPLRGKILNVERKDEA--AMYKNEEIQNLIRALG----LGVKGEDFKKEALRYH 409
RRFQAILPL+GKILNVER +A MYKN EI NLI ALG +GV+ + L Y
Sbjct: 444 RRFQAILPLKGKILNVERLTDANELMYKNTEISNLI-ALGYERTVGVRSRCHAFKLLLYG 502
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KI++LTDADVDGAHIRTLLLTF +R++ LF G +YV VPPLYKVERGK V + + DAE
Sbjct: 503 KIVVLTDADVDGAHIRTLLLTFLFRHRPQLFAAGRVYVAVPPLYKVERGKSVWWAHSDAE 562
Query: 470 LKKVKSS---FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 526
L + S P YS+QRFKGLGEMMP QLW+TTLNPE R+L++L + D +EA+ +
Sbjct: 563 LAALVSEQRLAPGG--YSVQRFKGLGEMMPQQLWDTTLNPESRLLRRLTVRDVSEADSML 620
Query: 527 SSLMGARVDTRKELIQNAANLVNLDHLDI 555
+ LMG +V+ RK LI+ + ++LD LD+
Sbjct: 621 TMLMGTKVEPRKALIEAYSRRLSLDALDV 649
>gi|299117008|emb|CBN73779.1| DNA topoisomerase IV subunit B [Ectocarpus siliculosus]
Length = 688
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 291/561 (51%), Positives = 390/561 (69%), Gaps = 9/561 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG SGY VSGGLHGVG+SVVNALS+ EV V R G + + RGK
Sbjct: 130 VLTVLHAGGKFGGDESGYKVSGGLHGVGVSVVNALSQWAEVEVVRGGKRHSLSFERGK-- 187
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T +++ GT +RF PD ++F T +F+ ++GR+ ELA+LN ++I +
Sbjct: 188 TQGDLFTADAGAEEAGGTAVRFLPDPEIFKTTTEFEFERLSGRMDELAYLNAGVSIVMAD 247
Query: 122 E----DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH---DVVGFRKDVDGITIDLALQ 174
D D + Y GG++E+V+ + +K+ LH V+ + DG+ ++ L
Sbjct: 248 ARSGVDEDGNFKKTETYLHKGGVQEFVELMCKEKQHLHPDMKVIRALGERDGVQVEACLS 307
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
W SD Y+D+++ +AN IRT DGGTH+EG+K+ +TRT+NS+G+KS +KD +L G+ VR
Sbjct: 308 WSSDMYTDSLVSFANGIRTGDGGTHLEGLKSIVTRTVNSMGRKSGKLKDSQSNLGGDFVR 367
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT ++SV+VP PEFEGQTK RLGNPEVR +VD V E L + E HP +L +IL K+
Sbjct: 368 EGLTAVVSVKVPEPEFEGQTKNRLGNPEVRGIVDSIVGEELVKLFEWHPKILGAILDKAS 427
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
SA AA AAK ARD+VR+KS+L S+ LPGKLADC+S P ESEI+IVEGDSA GSAKQGR
Sbjct: 428 SAQAAAAAAKAARDMVRRKSLLTSTVLPGKLADCASRDPVESEIYIVEGDSAAGSAKQGR 487
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DRR QAILPLRGKILN+E+ +Y+N E+Q LI ALGLG+KG +F +LRYH+I+++
Sbjct: 488 DRRTQAILPLRGKILNIEKCASERIYQNNELQALISALGLGIKGNEFDASSLRYHRIVVM 547
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDG+HIR LLLTFF+RYQ++L + G +++ PPLYK+++GK +Y Y E
Sbjct: 548 TDADVDGSHIRILLLTFFFRYQRSLIENGFVFIACPPLYKIKQGKTEKYVYTQEECDSAV 607
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
S P++ +QRFKGLGEMMP QLW+TT++P +R LK + +EDAA A+ +FS LMG V
Sbjct: 608 SELPASPAVQLQRFKGLGEMMPQQLWDTTMDPARRTLKLVTVEDAAAADRIFSVLMGDNV 667
Query: 535 DTRKELIQNAANLVNLDHLDI 555
RKE I AN + LD LD
Sbjct: 668 GPRKEFINEHANNLKLDDLDF 688
>gi|19909553|dbj|BAB86972.1| DNA gyrase subunit B [Leptolyngbya boryana IAM M-101]
Length = 546
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/473 (58%), Positives = 369/473 (78%), Gaps = 10/473 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE +EVTVWR+ + Q++ RG + L P + R GT + F
Sbjct: 81 LHGVGISVVNALSEWVEVTVWREKKVHLQRFERGIAMGELQVEPYP---QARTGTSVTFL 137
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEE 142
PD +FT +FD+ T++GR+RELA+LN ++ A +E S+ E + YF+ GG+ E
Sbjct: 138 PDASIFTETTKFDYTTLSGRLRELAYLNGGVRIKFADHREGSERE----DVYFYEGGIRE 193
Query: 143 YVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 201
Y+ ++N +K+PLH+ V F + +GI +++ALQWCSDAY+D ++G+AN+IRT+DGGTH+E
Sbjct: 194 YISYMNREKQPLHEEVIFVSGERNGIQVEVALQWCSDAYNDNIIGFANNIRTVDGGTHLE 253
Query: 202 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 261
G+KA LTRTLN++ +K +K+ + +L+GE++REGLT +ISV+VP+PEFEGQTKT+LGN
Sbjct: 254 GLKAVLTRTLNTIARKRNKIKENESNLAGENIREGLTAVISVKVPDPEFEGQTKTKLGNT 313
Query: 262 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 321
EVR +VD V E LTEYLE P+V D+I+ K++ A KAA AA+ AR++VR+KSVL SS+L
Sbjct: 314 EVRGIVDSLVGEVLTEYLEFRPNVSDAIIEKAVQAFKAAEAARHAREMVRRKSVLESSTL 373
Query: 322 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 381
PGKLADC+S P ESEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILN+E+ D++ +YK
Sbjct: 374 PGKLADCASRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDSKIYK 433
Query: 382 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 441
N EIQ LI ALGLG+KGE+F LRYH+III+TDADVDGAHIRTLLLTFFYRYQ+ + D
Sbjct: 434 NTEIQALITALGLGIKGEEFDVSQLRYHRIIIMTDADVDGAHIRTLLLTFFYRYQRMMVD 493
Query: 442 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEM 494
+G +Y+ PPL+KVERG+ YCY + EL++ ++FP NA Y+IQRFKGLGEM
Sbjct: 494 QGYVYIACPPLFKVERGRNHYYCYSERELQERLATFPDNASYNIQRFKGLGEM 546
>gi|452820768|gb|EME27806.1| DNA gyrase subunit B [Galdieria sulphuraria]
Length = 711
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 298/583 (51%), Positives = 402/583 (68%), Gaps = 33/583 (5%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP- 60
++TVLHAGGKFG S GY VSGGLHGVGLSVVNALSE L V V R+ Y Q++ RG P
Sbjct: 133 VLTVLHAGGKFG--SGGYHVSGGLHGVGLSVVNALSERLYVGVVRNNQLYEQEFQRGIPL 190
Query: 61 ----VTTLTCHVL----PVDSKDR------QGTRIRFWPDKQVFTTAIQFDHNTIAGRIR 106
V +T +L + DR GT++ F+PD +F ++ D + +A R
Sbjct: 191 GPMQVCDMTSDLLMEREGIQQYDRGFLQQKSGTKVHFYPDPVIFGETLEMDASFLAKRFD 250
Query: 107 ELAFLNPKLTIALRKEDSDPEKNQYNE-------------YFFAGGLEEYVQWLNTDKKP 153
ELA+LN L I L +E E + E + GG+ E+VQ+L+ +K+
Sbjct: 251 ELAYLNAGLQIILYREMHQIEVQESVENGSQSRKQIHPQVFIHQGGIREFVQFLSKEKQS 310
Query: 154 LHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS 213
+H+ V + + I ++ ALQW + YS+ +LG+ANSIR +DGG H+EG K+ LT+ +
Sbjct: 311 MHETVYIHRRIKQIEMEAALQWNREQYSEIILGFANSIRNLDGGVHVEGFKSGLTKCFHQ 370
Query: 214 LGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQE 273
+ KK T K++ +S +GE +REGL IISV+VP PEF+GQTKT+LGNPE+R +V+Q + E
Sbjct: 371 MAKK--TSKNETLSWNGELIREGLIGIISVKVPEPEFQGQTKTKLGNPEIRGLVEQVIIE 428
Query: 274 YLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTP 333
+ ++L+ +P+V ++L K +A +AA AAKRAR+L+R+KS L S++LPGKLADC++ P
Sbjct: 429 EVGDFLQTNPEVFQALLDKVNAAARAAEAAKRARELIRRKSALESAALPGKLADCATRNP 488
Query: 334 EESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALG 393
+E+E+FIVEGDSAGGSAKQGRDR FQAILPLRGKILNVE+ ++ +YKN EI LI ALG
Sbjct: 489 DEAELFIVEGDSAGGSAKQGRDRSFQAILPLRGKILNVEKANDVKIYKNAEIHALITALG 548
Query: 394 LGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY 453
GV FK E LRYH++II+TDADVDGAHIRTLLLTFFYRYQ+ L + G +Y+ PPL+
Sbjct: 549 AGVSDTHFKLELLRYHRVIIMTDADVDGAHIRTLLLTFFYRYQRPLIEHGHLYIACPPLF 608
Query: 454 KVERGKQVQYCYDDAELKK-VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLK 512
K ERGK +Y +D A L + ++ SNA Y+IQRFKGLGEMMPV+LW TT+NP+ R LK
Sbjct: 609 KFERGKTCKYFFDQASLDRFLEEELASNAKYTIQRFKGLGEMMPVELWNTTMNPQTRCLK 668
Query: 513 QLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
Q+ I DAAE+N +F+ L+G +VD RK + A ++ D LDI
Sbjct: 669 QVTITDAAESNNLFTMLLGDKVDRRKAFLNEHARSLSWDQLDI 711
>gi|30680397|ref|NP_850762.1| DNA gyrase subunit B [Arabidopsis thaliana]
gi|332003318|gb|AED90701.1| DNA gyrase subunit B [Arabidopsis thaliana]
Length = 519
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 281/338 (83%), Positives = 319/338 (94%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG+SSGYSVSGGLHGVGLSVVNALSE+LEV+VWRDGME+ Q YSRGKP+
Sbjct: 179 VLTVLHAGGKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQNYSRGKPI 238
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TTLTC VLP++SK +GT IRFWPDK+VFTTAI+FDHNTIAGRIRELAFLNPK+TI+L+K
Sbjct: 239 TTLTCRVLPLESKGTKGTSIRFWPDKEVFTTAIEFDHNTIAGRIRELAFLNPKVTISLKK 298
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
ED DPEK QY+EY FAGGL EYV WLNTDK P+HDV+GFR++++G T+D+ALQWCSDAYS
Sbjct: 299 EDDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREINGATVDVALQWCSDAYS 358
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
DTMLGYANSIRTIDGGTHIEGVKASLTRTLN+L KKSKTVK+KDISLSGEHVREGLTCI+
Sbjct: 359 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIV 418
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VPNPEFEGQTKTRLGNPEVRK+VDQSVQEYLTE+LELHPD+L+SI+SKSL+A KAAL
Sbjct: 419 SVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKSLNAYKAAL 478
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 339
AAKRAR+LVR KSVL+SSSLPGKLADCSST PE S ++
Sbjct: 479 AAKRARELVRSKSVLKSSSLPGKLADCSSTDPEVSGMY 516
>gi|335039151|ref|ZP_08532333.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
gi|334180961|gb|EGL83544.1| DNA topoisomerase IV, B subunit [Caldalkalibacillus thermarum
TA2.A1]
Length = 637
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 382/552 (69%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG GY VSGGLHGVG SVVNALSE LEV V RDG Y+Q+Y RG P
Sbjct: 95 VIMTVLHAGGKFGGE--GYKVSGGLHGVGASVVNALSEWLEVKVHRDGHIYYQRYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + R GT I F PD ++F +FD+ T+ R+RE+AFLN L I +
Sbjct: 153 EFDLKV----IGQTARTGTTITFKPDPEIFEETTEFDYETLRNRLREIAFLNKGLKIIFK 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
D E+ Q + + + GG+ +V+++N ++ LH+ + + +G+ +++ALQ+ +D++
Sbjct: 209 --DERMEQAQPDIFVYEGGIASFVEYINRAREVLHEPIYIEDEKEGVYVEIALQY-NDSF 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GGTH G K++LTR +N G+K +K+ D +L+G+ VREGLT +
Sbjct: 266 ASNLFSFANNIHTYEGGTHESGFKSALTRVINEYGRKQGLIKETDNNLTGDDVREGLTAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++P+P+FEGQTKT+LGN EVR + + ++ +L +P V IL K+L A +A
Sbjct: 326 ISVKIPDPQFEGQTKTKLGNSEVRGITENVFAKHFFTFLNENPSVAKKILEKALMAQRAR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+K+ L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQA
Sbjct: 386 EAAKKARELTRRKNALEVSSLPGKLADCSSRDPSISELYIVEGDSAGGSAKQGRDRHFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+NVE+ + N EI+ +I ALG G+ G++F RYHK+II+TDADVD
Sbjct: 446 ILPLRGKIINVEKARLDKILSNNEIRAIITALGTGI-GDEFDINKARYHKVIIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY K L + G +Y+ PPLYK+ +GK+V Y Y D EL++ P N
Sbjct: 505 GAHIRTLLLTFFYRYMKPLIERGYVYIAQPPLYKITQGKKVLYAYSDRELERKLKELPDN 564
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+IQR+KGLGEM P QLWETT++PE R L Q+ + DA EA+ +F +LMG +V+ R+E
Sbjct: 565 PKPTIQRYKGLGEMNPTQLWETTMDPESRTLLQVSLTDAVEADAIFETLMGDQVEPRREF 624
Query: 541 IQNAANLV-NLD 551
IQ A V NLD
Sbjct: 625 IQQHAKYVRNLD 636
>gi|88602335|ref|YP_502513.1| DNA gyrase, B subunit [Methanospirillum hungatei JF-1]
gi|88187797|gb|ABD40794.1| DNA gyrase subunit B [Methanospirillum hungatei JF-1]
Length = 675
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/582 (50%), Positives = 398/582 (68%), Gaps = 38/582 (6%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L TVW+DG EY +SRG+P
Sbjct: 99 VLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSVELTATVWKDGYEYRMFFSRGQPQ 156
Query: 62 TTLTCHVLPVDS-KDR---------------------------QGTRIRFWPDKQVFTTA 93
T L + KDR GT IRF PD ++F T
Sbjct: 157 TDLEKKEEDFEEIKDRYIKRYGSLPDNCPETKEEFLNRYLSKISGTMIRFKPDSKIFET- 215
Query: 94 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 153
I+FD++ +A R+RELAFLN +TI++ E + + + + GG+ EYV++LN + +P
Sbjct: 216 IEFDYDILAHRLRELAFLNSGITISIADERCEDLEECSEVFSYEGGISEYVRYLNHEAQP 275
Query: 154 LHD-VVGF-RKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 210
+H+ V+ F RKD + + +D+A Q+ + AYS+ + Y NS+ T +GGTH+EG +++LT+
Sbjct: 276 IHESVISFSRKDEEARVEVDIAFQYAA-AYSEKVYTYVNSVNTKEGGTHLEGFRSALTKA 334
Query: 211 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 270
+N +GK++K +KD+++SL G+ VREGLT IISVR+ NP+FEGQTK +LGN EV+ +VD
Sbjct: 335 INKMGKENKAIKDQNLSLKGDDVREGLTAIISVRMANPQFEGQTKMKLGNSEVKGIVDSL 394
Query: 271 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 330
V L EY E HP L +I+ K++ A +A AA++A++L R+KS L SS LPGKLADCS
Sbjct: 395 VYASLCEYFEEHPKELAAIVDKAVLAYQAREAARKAKELARRKSTLESSGLPGKLADCSE 454
Query: 331 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 390
+ E+SEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + KN EIQ LI
Sbjct: 455 RSAEKSEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKATVHKILKNNEIQALIS 514
Query: 391 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 450
A+G GV GE F E RYH III+TDADVDGAHI TLL+TFF+RY + L + G IY+ P
Sbjct: 515 AIGTGV-GESFDIEKARYHHIIIMTDADVDGAHISTLLMTFFFRYLQPLIEAGYIYLAQP 573
Query: 451 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 510
PLY++ +GKQ +Y Y + E+K++ + ++QR+KGLGEM QLW TT++PE R+
Sbjct: 574 PLYRIAKGKQEKYAYTEEEMKEILQEMGEKGV-NVQRYKGLGEMNASQLWATTMDPETRV 632
Query: 511 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
LK++VIEDAA AN +F LMG V R++ I+ +A + NLD
Sbjct: 633 LKRVVIEDAAYANEIFEKLMGDDVTARRDFIKRHAKEVTNLD 674
>gi|160331171|ref|XP_001712293.1| gyrB [Hemiselmis andersenii]
gi|159765740|gb|ABW97968.1| gyrB [Hemiselmis andersenii]
Length = 688
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 295/561 (52%), Positives = 389/561 (69%), Gaps = 16/561 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGK GY VSGGLHGVG+SVVNALSE L + R ++ RGK +
Sbjct: 135 VMTILHAGGK--FGGGGYKVSGGLHGVGVSVVNALSEFLHINTRRLEKGCSMRFVRGKTI 192
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ + K++ GT + F PD Q+F++ +D + GR+ ELAFLN L + L+
Sbjct: 193 GEIKAKKRNFNFKNKNGTSVNFKPDFQIFSSTFIYDPFILGGRLNELAFLNSNLKLILQ- 251
Query: 122 EDSDPEKNQYNEYFFA--GGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
D K NE F GG+ EY+ L+ K PLH + K++ GI++ +ALQW +D
Sbjct: 252 ---DRRKKNINESIFVHNGGISEYIFSLSKKKTPLHKTISIEKELKGISVQVALQWTTDH 308
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+ +L +AN+IRTI+GGTH++ +K +TRTLN G+K+ KD +LSGE +REGLT
Sbjct: 309 SQENILSFANNIRTIEGGTHLDSLKIVITRTLNFFGRKTGKFKDNFRNLSGEFIREGLTG 368
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH-PDVLDSILSKSLSALK 298
IISV++P PEFEGQTK++LGNP+VR +VD V +YL + E D SIL K++ A +
Sbjct: 369 IISVKIPEPEFEGQTKSKLGNPDVRSIVDTIVSDYLKNFFETQGKDACLSILEKAIEAYQ 428
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A+ AAK+AR+LVR+KSVL ++LPGKLADCS P +SEIFIVEGDSAGGSAKQ RDR F
Sbjct: 429 ASEAAKKARELVRRKSVLEFTTLPGKLADCSLKDPNKSEIFIVEGDSAGGSAKQARDRMF 488
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKI+N+E+ DE +YKN EIQ LI ALGLG K E+F LRY +III+TDAD
Sbjct: 489 QAILPLRGKIINIEKTDETRIYKNTEIQALISALGLGTKKENFDINRLRYRRIIIMTDAD 548
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-GKQVQ----YCYDDAELKKV 473
VDGAHIRTLLLTFFYRYQK L ++G +Y+ PPLYK+E GK +Q YCY DAEL+
Sbjct: 549 VDGAHIRTLLLTFFYRYQKKLIEKGLVYIACPPLYKIEETGKNLQNFKNYCYSDAELEFS 608
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
S ++QRFKGLGEMMP QLWETT++PE+R+LK++ + D +AN +F+ LMG +
Sbjct: 609 LSKHIKK--LNVQRFKGLGEMMPEQLWETTMDPEKRVLKRVEVSDIEKANKIFNVLMGDK 666
Query: 534 VDTRKELIQNAANLVNLDHLD 554
V RKE IQ A+ +NL+++D
Sbjct: 667 VFARKEFIQIHADKMNLENID 687
>gi|374307331|ref|YP_005053762.1| DNA gyrase subunit B [Filifactor alocis ATCC 35896]
gi|291165885|gb|EFE27932.1| DNA gyrase, B subunit [Filifactor alocis ATCC 35896]
Length = 638
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 292/552 (52%), Positives = 384/552 (69%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALS VTV R G Y Q++S+G
Sbjct: 99 VLTVLHAGGKFG--TGGYKVSGGLHGVGVSVVNALSTFFRVTVKRGGKIYVQEFSKGISE 156
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V + GT + F PD ++F +++ + T+ R+RELAFLN ++I L
Sbjct: 157 TELQ----EVGVTEETGTMVEFQPDAEIFD-ELEYRYETLEYRLRELAFLNKGISIVL-- 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
ED + Q E+ + GGL+E+V +LN +K PLH DV+ F K +D +++A+Q+ +DAY
Sbjct: 210 EDKRAGQEQKKEFSYLGGLKEFVVFLNKNKTPLHKDVIHFEKQIDEYYLEIAIQY-TDAY 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I TI+GG H+ G K +LTRT+N KKS K+K+ SLSGE VREGLT I
Sbjct: 269 IENIYSFANNINTIEGGMHLIGFKTALTRTINDYLKKSN--KNKEESLSGEDVREGLTAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS+++P P++EGQTKT+LGNP+VR VVD + EY YLE +P V I+ K+++A A
Sbjct: 327 ISIKLPEPQYEGQTKTKLGNPQVRSVVDSFLAEYFGAYLEENPQVAKIIIEKAMNARSAR 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRARDL R+K VL S+SLPGKLADCS P SEI+IVEGDSAGGSAKQGRDR+ QA
Sbjct: 387 EAAKRARDLTRRKGVLDSTSLPGKLADCSERDPALSEIYIVEGDSAGGSAKQGRDRKTQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + +EEI+N+I A G + GE+F + LRYHKI+I+TDADVD
Sbjct: 447 ILPLRGKILNVEKSRLDRILTSEEIKNMITAFGCSI-GEEFDESKLRYHKIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +RY K L + G +Y+ PPL+K+ RGK+ Y Y++ EL + F
Sbjct: 506 GAHIRTLLLTFMFRYMKPLIENGYVYIAQPPLFKIHRGKKEVYAYNEKELPAILQEFGEG 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
IQR+KGLGEM P QLWETT+NP+ R L ++ +ED + A+ FS LMG +V+ R+E
Sbjct: 566 HKPGIQRYKGLGEMNPEQLWETTMNPDTRTLLRVTVEDFSGADDTFSMLMGDKVEPRREF 625
Query: 541 IQNAANLV-NLD 551
I N A V NLD
Sbjct: 626 IHNNAQYVKNLD 637
>gi|451342761|ref|ZP_21911844.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
gi|449338492|gb|EMD17637.1| DNA gyrase, B subunit [Eggerthia catenaformis OT 569 = DSM 20559]
Length = 641
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 289/553 (52%), Positives = 385/553 (69%), Gaps = 13/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFG GY VSGGLHGVG SVVNALSE LEV V RDG Y+Q++ G KP
Sbjct: 98 IFTVLHAGGKFG--EGGYKVSGGLHGVGASVVNALSEYLEVYVHRDGHIYYQRFEDGGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V TL+ + D +D GT + F D +FT +D + + R+RELAFLN L + +
Sbjct: 156 VNTLS---IIGDCED-TGTTVLFKADPAIFTETTIYDFDILNQRVRELAFLNKGLKLII- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D EK + N Y + GGL EYV +LN +K LHD ++ + +DGI++++A+Q+ +D+
Sbjct: 211 -ADEREEKIKENIYHYEGGLREYVAYLNKNKTALHDEIIDCEETIDGISVEVAMQY-NDS 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + +AN+I TI+GG H EG +A+LTR +N+ G+ S +K+KD +LSGE REGLT
Sbjct: 269 YQSNIYSFANNIHTIEGGMHEEGFRAALTRVINNYGRTSGALKEKDENLSGEDCREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ PNP+FEGQTKT+LGN EVRK+ L ++L +PDV I+ K A KA
Sbjct: 329 IISVKHPNPQFEGQTKTKLGNAEVRKISRTIFANALDKFLMENPDVAKIIMDKVTLASKA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAKRAR++ R+K+ L + LPGKLADCSS P E EI+IVEGDSAGGSAK GRDRR Q
Sbjct: 389 RMAAKRAREMTRRKTALDIADLPGKLADCSSKDPSECEIYIVEGDSAGGSAKSGRDRRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE+F + LRYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLERILSNAEIRSMITAFGTGI-GEEFSLDKLRYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIR L+LTF YRY + L +EG +Y PPLY + +GK+ Y Y D EL+K++
Sbjct: 508 DGGHIRILMLTFLYRYLRPLIEEGYVYAAQPPLYLLRQGKEDHYLYSDYELEKLREELGK 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+A Y+IQR+KGLGEM P QLW+TT+NPE R+L ++ ++DA EA+++F LMG +V+ R++
Sbjct: 568 DAKYNIQRYKGLGEMNPEQLWDTTMNPEHRILNRINVDDAMEADLLFDMLMGEKVEPRRD 627
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 628 FIRENAKYVENLD 640
>gi|289523899|ref|ZP_06440753.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502555|gb|EFD23719.1| DNA gyrase, B subunit [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 645
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 388/553 (70%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALS LE+ +WRDGME+HQ+YSRG P
Sbjct: 106 VVLTILHAGGKF--DNKAYQVSGGLHGVGVSVVNALSTWLELIIWRDGMEWHQRYSRGVP 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
C + PV DR GT++ F PD +F F + ++ R+RE+AFL P L I L+
Sbjct: 164 ----QCELTPVGKADRTGTKVHFLPDDTIFEEK-DFSFDVLSSRLREIAFLVPGLKIDLK 218
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D N+ + + GG+ +V++LN DK PL + + + + D + +++ALQ+ +D+
Sbjct: 219 ----DLRNNKSVAFKYDGGVISFVEYLNRDKNPLFKEPIYIKGEKDDVLVEVALQY-NDS 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+ + + +AN I T++GGTH+ G + +LTR +N + ++ K +KDKD +LSG+ ++EGLT
Sbjct: 274 FQERVFAFANLIHTVEGGTHVVGFRTALTRAVNEMARRQKLLKDKDANLSGDDLKEGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKT+LGN +VR +VD V + L +LE PD L I+ K++ A +A
Sbjct: 334 IISVKLKEPQFEGQTKTKLGNSDVRGIVDSIVYDGLMAFLEEKPDCLRPIVEKAIKARQA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+LVR+KS LPGKLADCSS PEE E++IVEGDSAGGSAKQGR+R FQ
Sbjct: 394 RDAAKKARELVRRKSAFGGLDLPGKLADCSSKDPEECELYIVEGDSAGGSAKQGRNRTFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I+ALG G+ GEDF LRYH++II+TDADV
Sbjct: 454 AILPLRGKILNVEKARLDKVLSNAEIRTIIQALGCGI-GEDFDVNKLRYHRVIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLL FFYR+ + + G +Y+ PPLY+V+ GK YCY D EL+ + +
Sbjct: 513 DGAHIRTLLLAFFYRFMPGIIEGGHLYIAQPPLYRVQAGKSEYYCYSDKELRNMADKL-A 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N S+QR+KGLGEM P QLW+TT++P +R+LK++ +EDA A+ F+ LMG +V+ R+E
Sbjct: 572 NKKISVQRYKGLGEMNPEQLWKTTMDPNERILKRVDVEDALAADEYFTILMGDKVEPRRE 631
Query: 540 LIQNAANLV-NLD 551
I++ AN V NLD
Sbjct: 632 FIESHANEVRNLD 644
>gi|389574651|ref|ZP_10164711.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
gi|388425773|gb|EIL83598.1| DNA gyrase, B subunit [Bacillus sp. M 2-6]
Length = 640
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/553 (52%), Positives = 387/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q++ RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQQFKRGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT F PD ++FT I+FD++T+A R+RELAFL + I +
Sbjct: 155 VGDLEV----IGETDVTGTTTHFVPDPEIFTETIEFDYDTLANRVRELAFLTKGVNIII- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++ALQ+ +D+
Sbjct: 210 -EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE VREGLT
Sbjct: 268 YTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K + A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEKGVMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHKI+I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFTLEKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ + P
Sbjct: 507 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYVYNDKQLDELLKTLPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 TPKPGLQRYKGLGEMNATQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGDKVEPRRN 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAQYVKNLD 639
>gi|407980739|ref|ZP_11161515.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
gi|407412505|gb|EKF34300.1| DNA gyrase subunit B [Bacillus sp. HYC-10]
Length = 638
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/553 (52%), Positives = 386/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q++ RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQQFKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT F PD ++FT +FD++T+A R+RELAFL + I +
Sbjct: 153 VGDLKV----IGETDVTGTTTHFVPDPEIFTETTEFDYDTLANRVRELAFLTKGVNIVI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++ALQ+ +D+
Sbjct: 208 -EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE VREGLT
Sbjct: 266 YTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGEDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHKI+I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKIVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ + P
Sbjct: 505 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYVYNDKQLDELLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNASQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGDKVEPRRN 624
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 625 FIEENAQYVKNLD 637
>gi|357419158|ref|YP_004932150.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
gi|355396624|gb|AER66053.1| DNA gyrase subunit B [Thermovirga lienii DSM 17291]
Length = 635
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 384/553 (69%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF Y VSGGLHGVG+SVVNALSE L +TVWRDG E+ Q Y RGKP
Sbjct: 95 VVLTTLHAGGKF--DKKAYQVSGGLHGVGVSVVNALSEWLNLTVWRDGREWRQSYRRGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L C +S +++GT I F PD ++F F + ++ R RE+AFLNP LTI L+
Sbjct: 153 VSELCCG----ESTNKRGTLIEFKPDGEIFEETT-FSWDILSSRFREMAFLNPGLTIILK 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
S EK + + GG+ +V++LN K PL V + + DG+++++ LQ+ +D+
Sbjct: 208 DRISGKEKT----FHYEGGISSFVEYLNKGKNPLFTPPVVVKGEKDGVSVEIGLQY-NDS 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN I T++GGTH+ G + +LTR +N + +++K +KDKD +LSG+ ++EGLT
Sbjct: 263 YLERVFAFANLIHTVEGGTHVSGFRTALTRAINEMARRNKLLKDKDPNLSGDDLKEGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++P P+FEGQTKT+LGN E++ +VD + L ++ P++L ++ K++ A A
Sbjct: 323 VISVKLPEPQFEGQTKTKLGNGEIKGIVDSIFYDGLMVEIDERPEILKPVVEKAIKARLA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+LVR+K+ L LPGKLADCSS PEESE+FIVEGDSAGGSAKQGRDR FQ
Sbjct: 383 REAAKKARELVRRKTALAGLDLPGKLADCSSRNPEESELFIVEGDSAGGSAKQGRDRHFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I+ALG G+ GEDF LRYH+I ++TDADV
Sbjct: 443 AILPLRGKILNVEKARMDKVLDNNEVRTIIQALGTGI-GEDFDISKLRYHRIFLMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLT FYR+ L + G +Y+ PPLY+V+ GK++ YC+ D EL ++
Sbjct: 502 DGSHIRTLLLTLFYRFMPELIERGHLYIAQPPLYRVQIGKEIHYCFSDKELNNLRQKVGD 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+IQR+KGLGEM P QLWETT++P R+ K++ IEDA A+ FS LMG +V+ R+E
Sbjct: 562 GKKLNIQRYKGLGEMNPSQLWETTMDPATRVCKRIEIEDAVAADEYFSILMGDKVEPRRE 621
Query: 540 LIQNAANLV-NLD 551
I+ A V NLD
Sbjct: 622 FIEAHAREVRNLD 634
>gi|408355369|ref|YP_006843900.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
gi|407726140|dbj|BAM46138.1| DNA gyrase subunit B [Amphibacillus xylanus NBRC 15112]
Length = 640
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 378/552 (68%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T LHAGGKF +SGY VSGGLHGVG SVVNALS SL+V V RD Y+ + RG
Sbjct: 98 VIMTELHAGGKF--DNSGYKVSGGLHGVGASVVNALSTSLKVYVHRDNNIYYLDFKRG-- 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + D GT+I F PD +FT +FD+ T+ RIRELAFLN K+ I++
Sbjct: 154 --VLNTEIKVIGQTDTTGTKIHFSPDPDIFTETTEFDYETLLYRIRELAFLNKKIKISI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
ED K + +++ GG++EYV+++N K+ LH+ K+ + I +++ALQ+ S Y
Sbjct: 211 -EDKRKGKERKQTFYYEGGIKEYVEYMNRSKEVLHETFFAEKEEEDIIVEVALQYNS-GY 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + +AN+I T +GG H G K +LTR +N +K+K KD D +L+G+ VREG+T I
Sbjct: 269 SSNIYSFANNIHTHEGGMHESGFKTALTRVINDYARKTKIFKDNDENLTGDDVREGITAI 328
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN E R + D + E ++L +PD I++K + A +A
Sbjct: 329 VSIKHPDPQFEGQTKTKLGNSEARTITDSAFSEMFYKFLVENPDTAKIIVNKGVMASRAR 388
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR+L R+K L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQA
Sbjct: 389 MAAKKARELTRRKGALEISSLPGKLADCSSRDASISELYIVEGDSAGGSAKQGRDRHFQA 448
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+++I A+G G+ GE+F RYHK++I+TDADVD
Sbjct: 449 ILPLRGKILNVEKARLDRILSNNEIRSMITAMGTGI-GEEFDITKARYHKVVIMTDADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYR+ + L +EG IY+ PPLYKV++GK ++Y YDD+EL+ + P
Sbjct: 508 GAHIRTLLLTFFYRFMRPLIEEGYIYIAQPPLYKVQQGKTIRYAYDDSELELILRELPKQ 567
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM QLWETT++PE R L Q+ + DA EA+ +F LMG +V+ R+E
Sbjct: 568 PKPGLQRYKGLGEMNAEQLWETTMDPENRTLLQVKLNDAIEADQIFDMLMGDKVEPRREF 627
Query: 541 IQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 628 IQENAVYVKNLD 639
>gi|194016365|ref|ZP_03054979.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
gi|194011838|gb|EDW21406.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061]
Length = 640
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 287/553 (51%), Positives = 387/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q++ RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQQFKRGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT F PD ++FT I+FD++T+A R+RELAFL + I +
Sbjct: 155 VGDLEI----IGETDVTGTTTHFVPDTEIFTETIEFDYDTLANRVRELAFLTKGVNIVI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++ALQ+ +D+
Sbjct: 210 -EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE VREGLT
Sbjct: 268 YTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K + A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEKGVMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPL+KV++GK+V+Y Y+D +L ++ + P
Sbjct: 507 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLFKVQQGKRVEYVYNDKQLDELLKTLPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 TPKPGLQRYKGLGEMNATQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGDKVEPRRN 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAQYVKNLD 639
>gi|333977511|ref|YP_004515456.1| DNA gyrase subunit B [Desulfotomaculum kuznetsovii DSM 6115]
gi|333820992|gb|AEG13655.1| DNA gyrase, B subunit [Desulfotomaculum kuznetsovii DSM 6115]
Length = 636
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/555 (52%), Positives = 395/555 (71%), Gaps = 22/555 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKFGG+ Y VSGGLHGVG+SVVNALSE LEV + RDG YHQ+Y RGK V
Sbjct: 98 VLTMLHAGGKFGGTV--YKVSGGLHGVGVSVVNALSEWLEVEIRRDGHVYHQRYERGKAV 155
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V + + GT++ F PD ++F + F+H T++ R+REL+FLN + I R
Sbjct: 156 TPLKT----VGTANATGTKVSFKPDAEIFEELV-FNHETLSQRLRELSFLNRGIKIIFRD 210
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCS 177
E + Q Y GG+ ++V++LN +K+ LH+ V G R D + +++ALQ+ +
Sbjct: 211 ERT----GQEIVYQHDGGIRDFVRYLNKNKEVLHNRPIYVFGER---DNVQVEVALQY-T 262
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y +++ Y N+I T+DGGTH G K++LTR +N G+K +K+ +L+GE +REGL
Sbjct: 263 EGYVESLFSYVNNIHTVDGGTHEAGFKSALTRVINDYGRKYNLLKNGTPALAGEDIREGL 322
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+VP P+FEGQTKT+LGN EVR +VD V + L +LE +P V I+ K+++A
Sbjct: 323 TAVISVKVPEPQFEGQTKTKLGNSEVRGIVDTVVADGLATFLEENPGVARRIMDKAITAA 382
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+L R+KS L S+SLPGKLADCS P ++E+++VEGDSAGGSAKQGRDRR
Sbjct: 383 RAREAARKARELTRRKSALESASLPGKLADCSDRDPSKTELYLVEGDSAGGSAKQGRDRR 442
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILNVE+ + NEEI+ LI ALG G+ GEDF RYH+I++++DA
Sbjct: 443 FQAILPLRGKILNVEKARMDKILANEEIRALITALGTGI-GEDFDLSKARYHRILLMSDA 501
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + L + G +Y+ PPLY++ +GK +Y Y DAEL+++
Sbjct: 502 DVDGAHIRTLLLTFFYRYMRPLLEAGYVYIAQPPLYRIRKGKVDRYAYSDAELEEILKEI 561
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + SIQR+KGLGEM P QLWETT+NPE+R + ++ IEDA EA+ +FS LMG RV+ R
Sbjct: 562 GRDGV-SIQRYKGLGEMNPQQLWETTMNPEKRTILKVSIEDAIEADAIFSMLMGDRVEPR 620
Query: 538 KELI-QNAANLVNLD 551
+E I QNA + NLD
Sbjct: 621 REFIQQNARAVRNLD 635
>gi|157690804|ref|YP_001485266.1| DNA gyrase subunit B [Bacillus pumilus SAFR-032]
gi|157679562|gb|ABV60706.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bacillus pumilus
SAFR-032]
Length = 642
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/553 (52%), Positives = 386/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV+RDG ++Q++ RG P
Sbjct: 99 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQQFKRGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT F PD ++FT I+FD++T+A R+RELAFL + I +
Sbjct: 157 VGDLEI----IGETDVTGTTTHFVPDPEIFTETIEFDYDTLANRVRELAFLTKGVNIII- 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN K+ +H+ V + DGIT+++ALQ+ +D+
Sbjct: 212 -EDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVYIEGERDGITVEVALQY-NDS 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +K+ KD D +LSGE VREGLT
Sbjct: 270 YTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKNGVFKDGDSNLSGEDVREGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K + A +A
Sbjct: 330 IISIKHPDPQFEGQTKTKLGNSEARTITDSLFSEALEKFLLENPDAAKKIVEKGVMAARA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 390 RMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 450 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ S
Sbjct: 509 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYVYNDKQLDELLKSLSQ 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 569 TPKPGLQRYKGLGEMNAAQLWETTMDPDARTLLQVTLEDAIDADETFEMLMGDKVEPRRN 628
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 FIEENAQYVKNLD 641
>gi|403252574|ref|ZP_10918883.1| DNA gyrase subunit B [Thermotoga sp. EMP]
gi|402812064|gb|EJX26544.1| DNA gyrase subunit B [Thermotoga sp. EMP]
Length = 636
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/563 (50%), Positives = 393/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------DGITIDLA 172
E D + + F GG+ EYV++LN KK LHDV+ ++ D + +++A
Sbjct: 201 -EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD S GE
Sbjct: 260 FQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KDDSFQGED 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P+++ +ILSK
Sbjct: 318 VREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPELVKTILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTNREKTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF + LRY +II
Sbjct: 438 ARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESKLRYGRII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY + L ++G IY+ +PPLY+++ GK+ Y Y D EL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRIYIALPPLYRIKAGKEEFYVYSDQELAE 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|392406420|ref|YP_006443028.1| DNA gyrase subunit B [Anaerobaculum mobile DSM 13181]
gi|390619556|gb|AFM20703.1| DNA gyrase, B subunit [Anaerobaculum mobile DSM 13181]
Length = 645
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 388/553 (70%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+SVVNALS LE+TVWRDG+E+HQ+YSRG P
Sbjct: 106 VVLTTLHAGGKF--DNKAYQVSGGLHGVGVSVVNALSSWLELTVWRDGIEWHQRYSRGVP 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L V +R GT++ F PD +F F + ++ R+RE+AFL P +TI L+
Sbjct: 164 QSELKA----VGKAERTGTKVHFMPDDAIFEER-DFSFDVLSARLREIAFLVPGITIELK 218
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D + N+ + + GG+ +V++LN DK L + + + DG+ +++ALQ+ +D+
Sbjct: 219 ----DLKSNKSMTFRYEGGVVSFVKYLNRDKIALFAEPIYISGEKDGVLVEVALQY-NDS 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+ + + +AN I T++GGTH+ G + +LTR +N + ++ K +KDKD +LSG+ ++EGLT
Sbjct: 274 FQERVFAFANLIHTVEGGTHVIGFRTALTRAINEMARRQKLLKDKDPNLSGDDLKEGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKTRLGN +VR +VD V + L LE PD L I+ K++ A +A
Sbjct: 334 IISVKLKEPQFEGQTKTRLGNSDVRGIVDSIVYDELMATLEEKPDYLRPIVEKAIKARQA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+LVR+KS LPGKLADCSS PEE EI+IVEGDSAGGSAKQGR+R FQ
Sbjct: 394 RDAAKKARELVRRKSAFGGLDLPGKLADCSSKDPEECEIYIVEGDSAGGSAKQGRNRTFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I+ALG G+ GEDF LRYH++II+TDADV
Sbjct: 454 AILPLRGKILNVEKARLDKVLSNAEIRTIIQALGCGI-GEDFDISKLRYHRVIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLL FFYR+ + +EG +Y+ PPLY+V+ GK+ YCY D EL+ + S
Sbjct: 513 DGAHIRTLLLAFFYRFMPRIIEEGHLYIAQPPLYRVQVGKKEYYCYSDKELRNLMERL-S 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ ++QR+KGLGEM P QLW+TT++P +R+LK++ IEDA A+ F+ LMG +V+ R+E
Sbjct: 572 DKKATVQRYKGLGEMNPEQLWKTTMDPNERILKRVDIEDALAADEYFTILMGDKVEPRRE 631
Query: 540 LIQNAANLV-NLD 551
I+ AN V NLD
Sbjct: 632 FIEAHANEVRNLD 644
>gi|269791748|ref|YP_003316652.1| DNA gyrase subunit B [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099383|gb|ACZ18370.1| DNA gyrase, B subunit [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 636
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 385/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y VSGGLHGVG+SVVNALSE LEVT+WR+G E+ Q Y RG P
Sbjct: 95 VVLTVLHAGAKF--DKKAYQVSGGLHGVGVSVVNALSEWLEVTIWRNGKEHRQSYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + DR+GT++ F PD ++F+T ++F +T+ GR+RELAFLNP +TI R
Sbjct: 153 VTDLIAG----EDTDRRGTKVHFMPDGEIFST-LEFSADTLIGRLRELAFLNPGVTIVFR 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
DP + + F GG+ +V++LN K+ L + + + DG+ +++ALQ+ +D
Sbjct: 208 DLRQDPPMER--KLHFEGGIRSFVEYLNRGKEVLFSPPMVVKGEKDGVIVEVALQY-NDT 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN I T++GGTH+ G + +LTR +N +K K +KDKD + +G+ ++EGLT
Sbjct: 265 YLERIFAFANLINTVEGGTHVSGFRTALTRLINDQARKEKLLKDKDPNFTGDDLKEGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ P+FEGQTKT+LGN +V+ +VD V E L LE P +L ++ K++ A +A
Sbjct: 325 VISVKLLEPQFEGQTKTKLGNGDVKGIVDSVVYEGLKVILEDQPQILRPVVEKAVKARQA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+ARDLVR+KS + LPGKLADCS+ PEE E++IVEGDSAGGSAK GRDR FQ
Sbjct: 385 REAAKKARDLVRRKSAMSGMDLPGKLADCSNRRPEECELYIVEGDSAGGSAKMGRDRSFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N++++ +I+ALG GV G++F LRYHKI ++ DADV
Sbjct: 445 AILPLRGKILNVEKARLDKILSNDQVRTIIQALGCGV-GDEFDYSKLRYHKIFLMADADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT F+RY + + G +YV PPLY+V+ GK V YCY D ELK++ S
Sbjct: 504 DGAHIRTLLLTLFFRYMPQIIENGHLYVAQPPLYRVQEGKNVHYCYSDRELKEIMQRL-S 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
S+QR+KGLGEM P QLWETT++P R++K++ IEDA A+ +FS LMG V+ R+E
Sbjct: 563 GRKASVQRYKGLGEMNPEQLWETTMDPANRVIKRVEIEDAVLADELFSVLMGDAVEPRRE 622
Query: 540 LIQ-NAANLVNLD 551
I+ +A + NLD
Sbjct: 623 FIEAHAKEVRNLD 635
>gi|345304552|ref|YP_004826454.1| DNA gyrase subunit B [Rhodothermus marinus SG0.5JP17-172]
gi|345113785|gb|AEN74617.1| DNA gyrase, B subunit [Rhodothermus marinus SG0.5JP17-172]
Length = 649
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/558 (50%), Positives = 389/558 (69%), Gaps = 14/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF ++ Y VSGGLHGVG+S VNALS L TV RDG + Q Y+ GKP
Sbjct: 98 VVMTTLHAGGKFDKNT--YKVSGGLHGVGVSCVNALSRKLIATVKRDGYVWRQTYAYGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T+ V P+ + GT ++FWPD +F T ++F +T+A R+RELA+LN + I++
Sbjct: 156 -TSPVERVRPMREDEETGTIVQFWPDPTIFKT-VEFRFDTLAERLRELAYLNRGVRISIE 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E +Y EY+F GGL E+VQ+L+ + P+HD V+ + D + +++AL++ +D
Sbjct: 214 DRREEDESLRYEEYYFEGGLVEFVQYLDETRTPIHDEVIYIAGEADDVVVEVALRY-NDG 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L + N+I T +GGTH+ G + +LTRTL + +K+ +K+ LSGE REGLT
Sbjct: 273 YAENVLSFVNNINTHEGGTHVAGFRTALTRTLKAYAEKNNLLKNFKGELSGEDFREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP P+FEGQTKT+LGN EV+ +V V E+L+ +LE HP IL K + A +A
Sbjct: 333 VISVKVPEPQFEGQTKTKLGNSEVQGIVAGIVSEHLSRWLEDHPREARRILDKVILAAQA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+LV++K+ L SSLPGKLADC+S P + E+F+VEGDSAGGSAKQ R+R FQ
Sbjct: 393 RVAARKARELVQRKNALNGSSLPGKLADCASRDPSKCELFLVEGDSAGGSAKQARNREFQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHKIIILTDA 417
AILPLRGKILNVE+ + +NEEI+N++ ALG G+ EDF LRYH+III+TDA
Sbjct: 453 AILPLRGKILNVEKARLDKILENEEIRNIVTALGTGLATTEEDFDLSKLRYHRIIIMTDA 512
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR + L + G IY+ +PPLY+V+ GK +Y + D EL+++
Sbjct: 513 DVDGAHIRTLLLTFFYRQLRPLVEGGYIYIALPPLYRVKVGKTERYAWSDEELRQIVEEL 572
Query: 478 ----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
P A+ IQR+KGLGEM P QLWETT+NPE R+L+Q+ +EDAA A+ +FS LMG
Sbjct: 573 TDGQPQRAV--IQRYKGLGEMNPEQLWETTMNPETRILQQVTVEDAAAADRIFSILMGDA 630
Query: 534 VDTRKELIQNAANLVNLD 551
V+ R++ I+ A LD
Sbjct: 631 VEPRRKFIERNARYATLD 648
>gi|357014909|ref|ZP_09079908.1| DNA gyrase subunit B [Paenibacillus elgii B69]
Length = 636
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/552 (50%), Positives = 383/552 (69%), Gaps = 13/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS+ L V V R+G + Q+Y G P
Sbjct: 96 VVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSKKLIVEVKREGKVHQQEYRCGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT++ FWPD+Q+FT ++ + T+ RIRELAFLN + I L
Sbjct: 154 QQELQV----IGESDETGTKVTFWPDEQIFTETTEYSYETLQSRIRELAFLNKGIEITLT 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E +D ++ +F+ GG+ +V++LN +++ LH + D I +++ALQ+ +D+Y
Sbjct: 210 DERTDVSQS----FFYEGGIISFVEFLNQNREALHQAIYVEGQKDNIQVEIALQY-NDSY 264
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH G K++LTR LN +K +KD D +L+G+ VREG+T I
Sbjct: 265 TENIYSFANNINTHEGGTHESGFKSALTRILNDFARKFNAIKDSDANLTGDDVREGITAI 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P + I+ K + A +A
Sbjct: 325 ISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFMDENPTIARKIIEKGVQAQRAR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQA
Sbjct: 385 EAARKARELTRRKSALEVSSLPGKLADCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQA 444
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + + EI+ +I ALG G+ GEDF RYHKIII+TDADVD
Sbjct: 445 ILPLRGKILNVEKARMDKILSDNEIRAIITALGTGI-GEDFDIAKARYHKIIIMTDADVD 503
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ER K V+Y Y+D + + + + F
Sbjct: 504 GAHIRTLLLTFFYRYMRKLIEVGYVYIAQPPLYKLERNKTVRYAYNDKQREAILAEFGDG 563
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+IQR+KGLGEM P QLWETT++PE R + Q+ I+DA EA+ +F +LMG+ V+ R++
Sbjct: 564 VKVNIQRYKGLGEMNPEQLWETTMDPESRTMLQVSIQDAIEADTMFDTLMGSNVEPRRDF 623
Query: 541 IQNAANLV-NLD 551
IQ A V NLD
Sbjct: 624 IQLHAKYVQNLD 635
>gi|268318257|ref|YP_003291976.1| DNA gyrase subunit B [Rhodothermus marinus DSM 4252]
gi|262335791|gb|ACY49588.1| DNA gyrase, B subunit [Rhodothermus marinus DSM 4252]
Length = 649
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/558 (50%), Positives = 389/558 (69%), Gaps = 14/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S+ Y VSGGLHGVG+S VNALS L TV RDG + Q Y+ GKP
Sbjct: 98 VVMTTLHAGGKFDKST--YKVSGGLHGVGVSCVNALSRKLIATVKRDGYVWRQTYAYGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T+ V P+ + GT ++FWPD +F T ++F +T+A R+RELA+LN + I++
Sbjct: 156 -TSPVERVRPMREDEETGTIVQFWPDPTIFKT-VEFRFDTLAERLRELAYLNRGVRISIE 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E +Y EY+F GGL E+VQ+L+ + P+HD V+ + D + +++AL++ +D
Sbjct: 214 DRREEDESLRYEEYYFEGGLVEFVQYLDETRTPIHDEVIYIAGEADDVVVEVALRY-NDG 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L + N+I T +GGTH+ G + +LTRTL + +K+ +K+ LSGE REGLT
Sbjct: 273 YAENVLSFVNNINTHEGGTHVAGFRTALTRTLKAYAEKNNLLKNFKGELSGEDFREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP P+FEGQTKT+LGN EV+ +V V E+L+ +LE HP IL K + A +A
Sbjct: 333 VISVKVPEPQFEGQTKTKLGNSEVQGIVAGIVSEHLSRWLEDHPREARRILDKVILAAQA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+LV++K+ L SSLPGKLADC+S P + E+F+VEGDSAGGSAKQ R+R FQ
Sbjct: 393 RVAARKARELVQRKNALNGSSLPGKLADCASRDPSKCELFLVEGDSAGGSAKQARNREFQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHKIIILTDA 417
AILPLRGKILNVE+ + +N+EI+N++ ALG G+ EDF LRYH+III+TDA
Sbjct: 453 AILPLRGKILNVEKARLDKILENDEIRNIVTALGTGLATTEEDFDLSKLRYHRIIIMTDA 512
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR + L + G IY+ +PPLY+V+ GK +Y + D EL+++
Sbjct: 513 DVDGAHIRTLLLTFFYRQLRPLVEGGYIYIALPPLYRVKVGKTERYAWSDEELRQIVEEL 572
Query: 478 ----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
P A+ IQR+KGLGEM P QLWETT+NPE R+L+Q+ +EDAA A+ +FS LMG
Sbjct: 573 TDGQPQRAV--IQRYKGLGEMNPEQLWETTMNPETRILQQVTVEDAAAADRIFSILMGDA 630
Query: 534 VDTRKELIQNAANLVNLD 551
V+ R++ I+ A LD
Sbjct: 631 VEPRRKFIERNARYATLD 648
>gi|1622792|gb|AAC44498.1| DNA topoisomerase II subunit B [Thermotoga maritima MSB8]
Length = 636
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/563 (50%), Positives = 393/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTPMEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------DGITIDLA 172
E D + + F GG+ EYV++LN KK LHDV+ ++ D + +++A
Sbjct: 201 -EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD S GE
Sbjct: 260 FQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KDDSFQGED 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P+++ +ILSK
Sbjct: 318 VREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPELVKTILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF + LRY +II
Sbjct: 438 ARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESKLRYGRII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y D EL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVYSDQELAE 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|294102629|ref|YP_003554487.1| DNA gyrase subunit B [Aminobacterium colombiense DSM 12261]
gi|293617609|gb|ADE57763.1| DNA gyrase, B subunit [Aminobacterium colombiense DSM 12261]
Length = 634
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/553 (49%), Positives = 391/553 (70%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LE+T+ R+G+ Q++ RG P
Sbjct: 95 VVLTILHAGGKF--DNQAYKVSGGLHGVGVSVVNALSEWLEITIQRNGLSRTQRFERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L+ + + GT +RF PD +F ++F + ++GR+RE+AFLNP L I L
Sbjct: 153 VTDLS----EGEPSTKTGTYVRFHPDTTIFEE-VRFSADILSGRLREMAFLNPGLAITL- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D + E+ + GG++ ++++LN K PL + + + DG ++++ +Q+ +D
Sbjct: 207 ---EDHRSGKCVEFHYEGGIKTFIEYLNKGKTPLFPEPIVIAGEKDGASVEIGIQY-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN I TI+GGTH+ G + +LTR +N + +++K +++KD +LSGE ++EGLTC
Sbjct: 263 YLERIFAFANMIHTIEGGTHVAGFRTALTRAVNEVARRAKILREKDENLSGEDLKEGLTC 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S+++ NP+FEGQTKT+LGN E++ + D V E L YL+ H +VL ++ K++ A +A
Sbjct: 323 VLSIKLSNPQFEGQTKTKLGNSEIKGITDSVVYEGLLAYLDEHQEVLKPVVEKAIRARQA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+LVR K+ + +LPGKLADCSS P E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 383 RDAAKKARELVR-KTAMTGMNLPGKLADCSSRDPHVCEVYIVEGDSAGGSAKQGRDRGFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I+ALG G+ GEDF LRY+KIII+TDADV
Sbjct: 442 AILPLRGKILNVEKARFDKVLSNNEIRTIIQALGCGI-GEDFDHSKLRYNKIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTFFYRY + L D+G +Y+ PPLY+V+RGK V YCY + EL+ + S P
Sbjct: 501 DGAHISTLLLTFFYRYMQDLIDKGHLYLAQPPLYRVQRGKNVTYCYSEKELRDIVDSTPD 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ S+QR+KGLGEM P QLWETT++P+ R+LK++ +EDA A+ FS LMG +V+ R++
Sbjct: 561 SRRASVQRYKGLGEMNPDQLWETTMDPQNRVLKRIEVEDAMLADEYFSILMGDKVEPRRD 620
Query: 540 LIQNAANLV-NLD 551
I A+ V NLD
Sbjct: 621 FIAAHAHEVRNLD 633
>gi|15643596|ref|NP_228642.1| DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|418044997|ref|ZP_12683093.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
gi|6831559|sp|P77993.2|GYRB_THEMA RecName: Full=DNA gyrase subunit B; AltName: Full=Topoisomerase II
subunit B
gi|4981365|gb|AAD35915.1|AE001750_9 DNA gyrase, subunit B [Thermotoga maritima MSB8]
gi|351678079|gb|EHA61226.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
Length = 636
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/563 (50%), Positives = 393/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------DGITIDLA 172
E D + + F GG+ EYV++LN KK LHDV+ ++ D + +++A
Sbjct: 201 -EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD S GE
Sbjct: 260 FQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KDDSFQGED 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P+++ +ILSK
Sbjct: 318 VREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPELVKTILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF + LRY +II
Sbjct: 438 ARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESKLRYGRII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y D EL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVYSDQELAE 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|304405884|ref|ZP_07387542.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
gi|304345127|gb|EFM10963.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9]
Length = 636
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/553 (51%), Positives = 383/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE + VTV RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHVTVTVKRDGHVYQQEYRRGAP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + GT ++F PD ++FT +++ + RIRELAFLN ++I+L
Sbjct: 153 QYDIKV----IGDSEETGTIVQFKPDPEIFTETTVYEYEILQSRIRELAFLNKGISISL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
+D Q N Y + GG+ E+V++LN +++ LH+ + + D I +++ALQ+ +D+
Sbjct: 208 ---TDERTGQSNIYKYDGGIIEFVKYLNRNREALHETPIYVEGEKDHIQVEVALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YSD + +AN+I T +GGTH G K++LTR +N +++ ++KD D +LSG+ VREGLT
Sbjct: 264 YSDNIYSFANNINTHEGGTHESGFKSALTRIINDYARRTNSIKDNDSNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V I+ K L A +A
Sbjct: 324 IISVKIPEPQFEGQTKTKLGNSEVRGIVESFFAEKLQEFLDENPSVSKRIVEKGLQASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAARKARELTRRKSALEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I ALG G+ G+DF RYHKIII+TDADV
Sbjct: 444 AILPLRGKILNVEKARLDRILGNAEIRAIITALGTGI-GDDFDIAKARYHKIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + D G IY+ PPL+KVER K V+Y + E ++ + F
Sbjct: 503 DGAHIRTLLLTFFYRYMRKIIDAGFIYIAQPPLFKVERNKVVRYAQSEKERDQIIAEFGE 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
++QR+KGLGEM QLWETT++PE R + Q+ IEDA EA+VVF +LMG V+ R++
Sbjct: 563 GVKVNVQRYKGLGEMNATQLWETTMDPESRTMLQVTIEDAMEADVVFDTLMGDNVEPRRD 622
Query: 540 LIQNAANLV-NLD 551
I A V NLD
Sbjct: 623 FIHQYAKYVKNLD 635
>gi|170287901|ref|YP_001738139.1| DNA gyrase subunit B [Thermotoga sp. RQ2]
gi|170175404|gb|ACB08456.1| DNA gyrase, B subunit [Thermotoga sp. RQ2]
Length = 636
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/563 (50%), Positives = 393/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDILEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------DGITIDLA 172
E D + + F GG+ EYV++LN KK LHDV+ ++ D + +++A
Sbjct: 201 -EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD S GE
Sbjct: 260 FQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KDDSFQGED 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + +P+++ +ILSK
Sbjct: 318 VREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANPELVKTILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREKTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF + LRY +II
Sbjct: 438 ARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESKLRYGRII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y D EL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVYSDQELAE 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|311070653|ref|YP_003975576.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|419820961|ref|ZP_14344565.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
gi|310871170|gb|ADP34645.1| DNA gyrase subunit B [Bacillus atrophaeus 1942]
gi|388474872|gb|EIM11591.1| DNA gyrase subunit B [Bacillus atrophaeus C89]
Length = 638
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/553 (51%), Positives = 383/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D GT F PD ++FT +D++ ++ R+RELAFL + I +
Sbjct: 153 MADVEV----IGETDTTGTITHFVPDPEIFTETTVYDYDLLSSRVRELAFLTKGVKITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED EK Q NEY + GG++ YV++LN K+ +H+ + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREEKEQKNEYCYEGGIKSYVEYLNRSKEVVHEEPIYIEGTKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +K K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFANNINTYEGGTHEAGFKTGLTRVINDYARKKGIFKESDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L +L +PD ++ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDALFSEALETFLFENPDSARKVIDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPLYKV++GK+V+Y Y+D +L++V S+ P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYIYIAQPPLYKVQQGKRVEYAYNDKQLEEVLSTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P+ R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPDTRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|148269239|ref|YP_001243699.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
gi|147734783|gb|ABQ46123.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
Length = 636
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 282/563 (50%), Positives = 392/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDVLEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------DGITIDLA 172
E D + + F GG+ EYV++LN KK LHDV+ ++ D + +++A
Sbjct: 201 -EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K++LTR +N GKK +K KD S GE
Sbjct: 260 FQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEYGKKHNFLK-KDDSFQGED 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT +ISV V NPEFEGQTK++LGN EV++ V ++++E L + + + D++ +ILSK
Sbjct: 318 VREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREELKKIFDANSDLVKAILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AAKRAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAAKRAREMVRRKNVLQNTALPGKLADCSSTHREKTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF + LRY +II
Sbjct: 438 ARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDESKLRYGRII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ G++ Y Y D EL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGREEFYVYSDQELAE 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|220932011|ref|YP_002508919.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219993321|gb|ACL69924.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 637
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/556 (49%), Positives = 393/556 (70%), Gaps = 15/556 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF +S Y VSGGLHGVG+SVVNALSE LE+T + +G EY+Q+Y RG P
Sbjct: 96 VVMTTLHAGGKFNNNS--YKVSGGLHGVGISVVNALSEWLELTTYWNGNEYYQRYERGYP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + +R GT I F PD ++F +F + T+A R++E AFLN +L++ L
Sbjct: 154 KTKFQ----KLGTSNRNGTIISFKPDPEIFDVT-EFKYETLAHRLQESAFLNKELSLILI 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+ SD K + +Y GG++ +V++LN +++ ++ D++ K+ I++ALQ+ ++
Sbjct: 209 DKRSDKTKKEVFQY--DGGIKAFVEYLNKNRQVINEDIIYTEKENGDYYIEVALQY-NEG 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + YAN+I T+DGG H+ G K +LT+ +N+ K++ +K D +L+G VREGLT
Sbjct: 266 YNERIFSYANNINTVDGGYHLTGFKTALTKAINNFAKQNNLLKQSDPTLTGNDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+++V++PNP+FEGQTK++LGN E+R +V+ ++ +YL+ YL+ +P+V I+ K++ A++A
Sbjct: 326 VVNVKLPNPQFEGQTKSKLGNSEIRSIVESNIYDYLSLYLDSNPEVGKKIVDKAIQAIRA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
A+K+AR+L R+K+ L S SLPGKLADC+S PE+SE+F+VEGDSAGGSAKQGR+R FQ
Sbjct: 386 RQASKKARELTRRKNALNSHSLPGKLADCASRKPEKSELFLVEGDSAGGSAKQGRNRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVER + N EI +I ALG G+ G++F + LRYHKIII+TDADV
Sbjct: 446 AILPLKGKIMNVERARLDKILSNNEIATIISALGTGI-GQEFNIDKLRYHKIIIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLT FYRY L EG IY+ PPLYKV K ++Y Y D EL+ +K
Sbjct: 505 DGAHIATLLLTLFYRYMPELIKEGYIYIAQPPLYKVSWKKNIRYLYTDKELESLKREL-E 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N YSIQR+KGLGEM P QLWETT+NPE R L ++ I+D EA+ +F+ LMG+ R+E
Sbjct: 564 NKSYSIQRYKGLGEMNPRQLWETTMNPETRKLLRIEIDDEIEADEIFTRLMGSNASLRRE 623
Query: 540 LIQNAANLVNLDHLDI 555
I + A++V D LDI
Sbjct: 624 FIISNADMV--DELDI 637
>gi|73670270|ref|YP_306285.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
gi|72397432|gb|AAZ71705.1| DNA gyrase subunit B [Methanosarcina barkeri str. Fusaro]
Length = 633
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 288/552 (52%), Positives = 384/552 (69%), Gaps = 14/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVN LSE LEV V R+G +Y Q+Y RGKP
Sbjct: 94 VVMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNGLSEWLEVEVAREGKKYFQRYDRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VL + + + GT+ F PD+++F T + FD+ ++ R+RELAFLN LTI+L
Sbjct: 152 ----KADVLEIGTSETTGTKTTFKPDEKIFET-LDFDYEILSNRLRELAFLNRGLTISLM 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
D Q + + GG+ E+V++LN K+PLH + F + D + +++A+Q+ S +Y
Sbjct: 207 --DLRTPDGQAETFTYEGGIVEFVKYLNNKKQPLHAPIYFERQRDDMVVEIAMQYTS-SY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTHI G K +LTR N K +K K+ DI L+G+ VREGLT I
Sbjct: 264 AENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DIKLTGDDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++ P+FEGQTKTRLGN +V+ +VD V + L EY E +P V + IL K+L A KA
Sbjct: 323 ISVKLMEPQFEGQTKTRLGNSDVKGIVDSLVTDGLAEYFEENPKVANVILEKALLAQKAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+K+ L S+LPGKLADCS P EI+IVEG+SAGGSAKQGRDR FQA
Sbjct: 383 EAAKKARELTRRKNALEVSTLPGKLADCSEKNPAACEIYIVEGNSAGGSAKQGRDRSFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ A + KNEEI +LI A+G G+ EDF E+ RYHK+II+TDADVD
Sbjct: 443 ILPLRGKILNVEKSRLAKILKNEEIISLITAIGTGI-SEDFTLESARYHKVIIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G HIRTLLLT F+RY + L DEG +Y+ PPLY++++GK Y + D EL+ K
Sbjct: 502 GEHIRTLLLTLFFRYMRPLIDEGYVYIAQPPLYRIKKGKAEYYIHSDRELEAKKKELGEK 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
L IQR+KGLGEM P QLWETT+NPE R+L Q+ +EDA A+ +F LMG V+ R+
Sbjct: 562 GL-GIQRYKGLGEMNPGQLWETTMNPESRILLQVTLEDAIRADEIFRVLMGDEVEPRRNF 620
Query: 541 IQ-NAANLVNLD 551
I+ +A +VNLD
Sbjct: 621 IEAHAKEVVNLD 632
>gi|379718020|ref|YP_005310151.1| protein GyrB [Paenibacillus mucilaginosus 3016]
gi|378566692|gb|AFC27002.1| GyrB [Paenibacillus mucilaginosus 3016]
Length = 637
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 283/551 (51%), Positives = 382/551 (69%), Gaps = 12/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
V + HAGGKFGG SGY VSGGLHGVG+SVVNALS+ L V V R+G + Q++S G P
Sbjct: 96 VVLTHAGGKFGGDESGYKVSGGLHGVGISVVNALSKKLVVQVKREGKVHQQEFSCGVPQY 155
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + + GT+ FWPD+++F ++D +T+ RIRELAFLN + I L E
Sbjct: 156 DLKI----IGETEETGTQATFWPDEEIFKETTEYDFDTLQSRIRELAFLNKGIEIVLTDE 211
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYS 181
SD N + + GG+ +V+ LN +++PLH+ F + D IT+++ALQ+ +D Y+
Sbjct: 212 RSDVS----NSFMYEGGIVSFVEHLNRNREPLHEPPIFVEGEKDNITVEVALQY-NDTYA 266
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + +AN+I T +GGTH G K++LTR LN +K T+KD D +LSG+ VREGLT II
Sbjct: 267 ENIYSFANNINTHEGGTHESGFKSALTRILNEYARKYNTIKDNDANLSGDDVREGLTAII 326
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++P P+FEGQTKT+LGN EVR +V+ + L E+L +P V I+ K + A +A
Sbjct: 327 SVKIPEPQFEGQTKTKLGNSEVRGIVESLFSDKLEEFLVENPSVAKKIVEKGVQAQRARE 386
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQAI
Sbjct: 387 AARKARELTRRKSALEVSSLPGKLADCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQAI 446
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + N EI+ +I ALG G+ G+DF+ RYHK+II+TDADVDG
Sbjct: 447 LPLRGKILNVEKARLDKILSNAEIRAIITALGTGI-GDDFEITKARYHKVIIMTDADVDG 505
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFF+RY + L + G +Y+ PPLYK+ER K ++Y Y+D + + + + F A
Sbjct: 506 AHIRTLLLTFFFRYMRKLIEAGFVYIAQPPLYKLERNKTIRYAYNDKQREAIMAEFGEGA 565
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
++QR+KGLGEM P QLWETT++P+ R L Q+ I+DA +A+VVF +LMG V+ R++ I
Sbjct: 566 KVNVQRYKGLGEMNPGQLWETTMDPDSRTLLQVSIQDAIDADVVFDTLMGDAVEPRRDFI 625
Query: 542 QNAANLV-NLD 551
Q A V NLD
Sbjct: 626 QLHARYVKNLD 636
>gi|323342250|ref|ZP_08082482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|336065250|ref|YP_004560108.1| DNA gyrase subunit B [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463362|gb|EFY08556.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|334295196|dbj|BAK31067.1| DNA gyrase, B subunit [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 639
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/551 (49%), Positives = 378/551 (68%), Gaps = 11/551 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEV ++ DG+EY+ ++ G V
Sbjct: 98 IFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVKIYLDGIEYYLRFEEGGKV 155
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ V D++GT +RF D +FT +F H+ + R+R++AFLN + + +
Sbjct: 156 A---VPLKEVGKTDKKGTTVRFKADPTIFTETTEFSHDVLRDRLRQIAFLNKGIKLVFQD 212
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
E +PE+ ++ E+ + GL EYVQ++N +K P+H+ +V + +GI +++++Q+ +D +
Sbjct: 213 E-REPEETRHLEFVYEDGLREYVQYMNANKSPIHEEIVYCEGEEEGILVEVSMQY-NDGF 270
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + + N+I T +GGTH +G K +LTR +N+ K+ +K D G+ VREGLT I
Sbjct: 271 TPNIYSFCNNINTHEGGTHEDGFKLALTRVINNYAKEHNLLKKDDDGFLGDDVREGLTAI 330
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P+P++EGQTKT+LGN EVRK+V E L +L HPD I+ K+ A KA
Sbjct: 331 ISVKHPDPQYEGQTKTKLGNSEVRKIVSSVFGEQLERFLMEHPDDAKIIVDKAAIASKAR 390
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AA++AR+L R+K L SSLPGKLADCS+ P E EI+IVEGDSAGGSAKQGRD +FQA
Sbjct: 391 VAARKARELTRRKGALEVSSLPGKLADCSNRNPSECEIYIVEGDSAGGSAKQGRDSKFQA 450
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGK++NVE+ ++ N EI+ +I A G GV E + LRYHKIII+TDADVD
Sbjct: 451 ILPLRGKVINVEKARLHKIFDNNEIRMMITAFGTGVSDE-MDIDKLRYHKIIIMTDADVD 509
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ RG ++ Y Y++ EL ++K F
Sbjct: 510 GAHIRTLLLTFFYRFLRPLIENGFVYIAQPPLYKISRGNKIAYAYEEEELDELKVEFGDR 569
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+++QR+KGLGEM P QLW+TT++PE R L Q+ I+DA EA+V+F +LMG V R+E
Sbjct: 570 --FNVQRYKGLGEMNPEQLWDTTMDPETRTLIQVTIDDAMEADVIFETLMGDEVAPRREF 627
Query: 541 IQNAANLVNLD 551
IQ A +LD
Sbjct: 628 IQANAEYADLD 638
>gi|337744370|ref|YP_004638532.1| protein GyrB [Paenibacillus mucilaginosus KNP414]
gi|386720575|ref|YP_006186900.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
gi|336295559|gb|AEI38662.1| GyrB [Paenibacillus mucilaginosus KNP414]
gi|384087699|gb|AFH59135.1| DNA gyrase subunit B [Paenibacillus mucilaginosus K02]
Length = 637
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 386/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS+ LEV V R+G Y Q+Y G P
Sbjct: 96 VVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSKKLEVQVKREGKVYQQEYRCGAP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + GT++ FWPD+++FT ++D +T+ RIRELAFLN + I L
Sbjct: 154 ----QYDIKEIGESEMTGTQVTFWPDEEIFTETTEYDFDTLQSRIRELAFLNKGIEIVLT 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E +D + + + GG+ +V+ LN +++P+H + + D I +++ALQ+ +D+
Sbjct: 210 DERTDISQT----FIYEGGIISFVEHLNQNREPVHQPPIYVEGEKDHIQVEVALQY-NDS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH G K++LTR LN +K +K+ D +LSG+ VREGLT
Sbjct: 265 YTENIYSFANNINTHEGGTHESGFKSALTRILNEYARKYNAIKESDANLSGDDVREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P+P+FEGQTKT+LGN EVR +V+ E L E+L+ +P + I+ K + A +A
Sbjct: 325 IISVKIPDPQFEGQTKTKLGNSEVRGIVESLFAEKLEEFLQENPAIAKKIVEKGVQAQRA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 385 REAARKARELTRRKSALEVSSLPGKLADCSSKDASISEVYIVEGDSAGGSAKQGRDRHFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYHKIII+TDADV
Sbjct: 445 AILPLRGKILNVEKARLDKILSNAEIRAIITALGTGI-GEDFDISKARYHKIIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+RY + L + G +Y+ PPLYK+ER K ++Y Y+D + + + + F
Sbjct: 504 DGAHIRTLLLTFFFRYMRKLIEAGFVYIAQPPLYKLERNKTIRYAYNDKQREAIMAEFGE 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM P QLWETT++P+ R L Q+ I+DA +A+VVF +LMG V+ R++
Sbjct: 564 GAKVNVQRYKGLGEMNPGQLWETTMDPDSRTLLQVSIQDAIDADVVFDTLMGDAVEPRRD 623
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 624 FIQLHARYVKNLD 636
>gi|52078497|ref|YP_077288.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423680393|ref|ZP_17655232.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
gi|52001708|gb|AAU21650.1| DNA gyrase (subunit B) [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441499|gb|EID49208.1| DNA gyrase subunit B [Bacillus licheniformis WX-02]
Length = 639
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 385/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV+RDG ++Q++ RG P
Sbjct: 96 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVYRDGKIHYQEFERGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT F PD ++FT ++D++T+A R+RELAFL + I +
Sbjct: 154 KADLKV----IGDTEVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAFLTKGVKITI- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN ++ +H+ V DGIT+++ALQ+ +D+
Sbjct: 209 -EDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIEGSKDGITVEVALQY-NDS 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +++ K+ D +LSGE VREGLT
Sbjct: 267 YTSNIYSFANNIHTYEGGTHEAGFKTGLTRVINDYARRNGVFKESDPNLSGEDVREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K + A +A
Sbjct: 327 IISIKHPDPQFEGQTKTKLGNSEARTITDALFSEALEKFLLENPDSAKKIVEKGVMAARA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 387 RMAAKKARELTRRKSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQGRDRHFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 447 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + ++G +Y+ PPLYKV++GK+V+Y Y+D +L+++ P
Sbjct: 506 DGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKVQQGKRVEYAYNDQQLEEILKELPQ 565
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N +QR+KGLGEM QLWETT++PE R L Q+ ++DA +A+ F LMG +V+ R+
Sbjct: 566 NPKPGLQRYKGLGEMNATQLWETTMDPETRTLLQVTLKDAIDADETFEMLMGDKVEPRRN 625
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 626 FIEENARYVKNLD 638
>gi|319648524|ref|ZP_08002740.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
gi|404487367|ref|YP_006711473.1| DNA gyrase subunit B [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346363|gb|AAU38997.1| DNA gyrase beta subunit GyrB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389603|gb|EFV70414.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2]
Length = 637
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 385/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV+RDG ++Q++ RG P
Sbjct: 94 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVYRDGKIHYQEFERGVP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT F PD ++FT ++D++T+A R+RELAFL + I +
Sbjct: 152 KADLKV----IGDTEVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAFLTKGVKITI- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN ++ +H+ V DGIT+++ALQ+ +D+
Sbjct: 207 -EDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIEGSKDGITVEVALQY-NDS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +++ K+ D +LSGE VREGLT
Sbjct: 265 YTSNIYSFANNIHTYEGGTHEAGFKTGLTRVINDYARRNGVFKESDPNLSGEDVREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K + A +A
Sbjct: 325 IISIKHPDPQFEGQTKTKLGNSEARTITDALFSEALEKFLLENPDSAKKIVEKGVMAARA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 385 RMAAKKARELTRRKSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQGRDRHFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 445 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + ++G +Y+ PPLYKV++GK+V+Y Y+D +L+++ P
Sbjct: 504 DGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKVQQGKRVEYAYNDQQLEEILKELPQ 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N +QR+KGLGEM QLWETT++PE R L Q+ ++DA +A+ F LMG +V+ R+
Sbjct: 564 NPKPGLQRYKGLGEMNATQLWETTMDPETRTLLQVTLKDAIDADETFEMLMGDKVEPRRN 623
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 624 FIEENARYVKNLD 636
>gi|384173667|ref|YP_005555052.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349592891|gb|AEP89078.1| DNA gyrase, B subunit [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 638
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 380/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D GT F PD ++FT ++D++ +A R+RELAFL + I +
Sbjct: 153 VTDLEI----IGETDHTGTTTHFVPDPEIFTETTEYDYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++ + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|114565581|ref|YP_752735.1| DNA topoisomerase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336516|gb|ABI67364.1| DNA gyrase subunit B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 633
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 387/553 (69%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T LH+GGKFGGS GY++SGGLHGVGLSVVNALS +EV V RDG Y Q Y RG P
Sbjct: 93 VILTTLHSGGKFGGS--GYNISGGLHGVGLSVVNALSRRMEVRVKRDGHIYQQDYERGNP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + GT I F+ D ++F I F+ + R+REL+FLN L I+LR
Sbjct: 151 VNEIRI----IGESKETGTSICFFADDEIFEE-INFEREILLQRLRELSFLNRNLKISLR 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ Y E+ ++ GL+++V ++N +K+ ++D + F D + + +A+Q+ +++
Sbjct: 206 --DEREEEVFYQEFHYSHGLKDFVAYINKNKEVINDNPIYFENKKDDVIVQVAIQY-NNS 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ + +AN+IRT +GGTH G K +LTR +N KK+ +K+ D +LSGE +REG+
Sbjct: 263 YSENLYSFANNIRTQEGGTHEIGFKNALTRVINDYAKKNNILKENDNNLSGEDIREGIAA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV V +P+FEGQTKT+LGN +R +V+ V E++ +YL +P +L K++SA +A
Sbjct: 323 IISVLVKDPQFEGQTKTKLGNTYIRGIVESIVFEHVEDYLNENPAAARKLLDKAISARRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+K+ L S++LPGKLADCS+ P ESE+FIVEGDSAGGSAKQGRDR +Q
Sbjct: 383 REAAKKARELTRRKNALESTALPGKLADCSNKNPAESELFIVEGDSAGGSAKQGRDRTYQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + +EEI+NLI A+G G+ GEDF + RYHK+ I+TDADV
Sbjct: 443 AILPLRGKILNVEKARLDRVLSSEEIRNLITAMGTGI-GEDFDIKKARYHKLFIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIR LLLTFFYRY K L +EG +Y+ PPLY ++RGK+++Y Y+DA+L S +
Sbjct: 502 DGSHIRVLLLTFFYRYMKELIEEGYLYIAQPPLYGLKRGKEIKYFYNDADLNAFLSQ--T 559
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SIQR+KGLGEM P QLW TT++ E R + ++ IEDA +AN +FS+LMG V R+E
Sbjct: 560 EQKWSIQRYKGLGEMDPEQLWTTTMDAESRTVLKVTIEDAIKANDIFSALMGDNVQPRRE 619
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 620 FIESNARYVANLD 632
>gi|219121994|ref|XP_002181340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407326|gb|EEC47263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 727
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 292/574 (50%), Positives = 378/574 (65%), Gaps = 20/574 (3%)
Query: 2 IVTVLHAGGKFG--GSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK 59
++T LHAGGKF GS+SGY VSGGLHGVG+SVVNALSE + V V R Y ++ RG
Sbjct: 154 VLTELHAGGKFDNQGSNSGYKVSGGLHGVGISVVNALSEFVHVKVDRTPELYQMRFERGV 213
Query: 60 PVTTLTC--HVLPVDSKDRQGTRIRFWPDKQVFT-----TAIQFDHNTIAGRIRELAFLN 112
P L + + SK + GT + F PD +VF I FD + + GR+ E+A+LN
Sbjct: 214 PTGPLQNLDKLKTLLSKRKSGTSVTFLPDLKVFKGDNGKPDITFDSSRLKGRMDEIAYLN 273
Query: 113 PKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG-------FRKDVD 165
L + L+ E P + + ++ AGGL EY + L K PL RK D
Sbjct: 274 AGLVLTLKDERKSPGRGRLQVFYHAGGLAEYAELLCRTKTPLFQGTTSSRKKKPARKQKD 333
Query: 166 GITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD 225
+ D AL+W SD Y++++L + N+IRT DGG+H+EG+KA LTRT+N K+S K+
Sbjct: 334 SASDDDALRWSSDMYAESILSFCNNIRTRDGGSHVEGLKACLTRTVNQAAKRSNKAKEGA 393
Query: 226 ISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDV 285
+L GE +REGLT I+SV V PEFEGQTK RLGNPEVR VD + LT+ + P++
Sbjct: 394 ANLPGEFIREGLTAIVSVSVSEPEFEGQTKGRLGNPEVRPAVDSLLSAELTKLFDFRPEI 453
Query: 286 LDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDS 345
LD+I +K+ SA AA AAK ARD+VR+K++L S+ LPGKLADC+S PEESEIFIVEGDS
Sbjct: 454 LDAIYNKASSAQAAAAAAKAARDMVRRKTLLTSTILPGKLADCASRDPEESEIFIVEGDS 513
Query: 346 AGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA 405
A GSAKQGRDRR QAILPLRGKILN+ER +Y+N E+Q LI ALGLGVKG +F ++
Sbjct: 514 AAGSAKQGRDRRTQAILPLRGKILNIERAATERIYQNTELQGLISALGLGVKGSEFDPKS 573
Query: 406 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE----RGKQV 461
LRY +I+I+TDADVDGAHIR LLLTFFYRYQ+ L + G +Y+ PPLYKV R ++
Sbjct: 574 LRYGRIVIMTDADVDGAHIRVLLLTFFYRYQRELVENGHVYIAQPPLYKVSVGSGRSRKE 633
Query: 462 QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 521
Y ++D E V + S+QRFKGLGEMMP QLW TT++PE+R + Q+ + DA+
Sbjct: 634 GYAFNDTERNTVMMQALAAGKVSLQRFKGLGEMMPEQLWSTTMDPERRTMLQVTVNDASM 693
Query: 522 ANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
A+ S LMG V RKE I A + +D LD+
Sbjct: 694 ADQTLSILMGDTVAPRKEFISTQAETLRVDDLDL 727
>gi|407962968|dbj|BAM56207.1| DNA gyrase subunit B [Bacillus subtilis BEST7003]
Length = 640
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 380/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D GT F PD ++F+ ++D++ +A R+RELAFL + I +
Sbjct: 155 VTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTKGVNITI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 210 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 268 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++ + P
Sbjct: 507 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 FIEANARYVKNLD 639
>gi|16077074|ref|NP_387887.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221307815|ref|ZP_03589662.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168]
gi|221312137|ref|ZP_03593942.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221317070|ref|ZP_03598364.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. JH642]
gi|221321333|ref|ZP_03602627.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SMY]
gi|321313673|ref|YP_004205960.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|402774249|ref|YP_006628193.1| DNA gyrase subunit B [Bacillus subtilis QB928]
gi|418030644|ref|ZP_12669129.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428277418|ref|YP_005559153.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|449092720|ref|YP_007425211.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452912985|ref|ZP_21961613.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
gi|121887|sp|P05652.1|GYRB_BACSU RecName: Full=DNA gyrase subunit B
gi|40018|emb|CAA26221.1| unnamed protein product [Bacillus subtilis]
gi|467396|dbj|BAA05242.1| B subunit of DNA gyrase [Bacillus subtilis]
gi|2632273|emb|CAB11782.1| DNA gyrase (subunit B) [Bacillus subtilis subsp. subtilis str. 168]
gi|291482375|dbj|BAI83450.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195]
gi|320019947|gb|ADV94933.1| DNA gyrase subunit B [Bacillus subtilis BSn5]
gi|351471703|gb|EHA31816.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402479435|gb|AFQ55944.1| DNA gyrase (subunit B) [Bacillus subtilis QB928]
gi|407955697|dbj|BAM48937.1| DNA gyrase subunit B [Bacillus subtilis BEST7613]
gi|449026635|gb|AGE61874.1| DNA gyrase subunit B [Bacillus subtilis XF-1]
gi|452118013|gb|EME08407.1| DNA gyrase, B subunit [Bacillus subtilis MB73/2]
Length = 638
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 380/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D GT F PD ++F+ ++D++ +A R+RELAFL + I +
Sbjct: 153 VTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++ + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|430756787|ref|YP_007211252.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430021307|gb|AGA21913.1| DNA gyrase protein GyrA (subunit B) [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 643
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 380/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 100 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D GT F PD ++F+ ++D++ +A R+RELAFL + I +
Sbjct: 158 VTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTKGVNITI- 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 213 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 271 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 330
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 331 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARA 390
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 391 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 450
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 451 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++ + P
Sbjct: 510 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQ 569
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 570 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 629
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 630 FIEVNARYVKNLD 642
>gi|386756586|ref|YP_006229802.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
gi|384929868|gb|AFI26546.1| DNA topoisomerase IV subunit B [Bacillus sp. JS]
Length = 638
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 379/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + D GT F PD ++FT ++D++ +A R+RELAFL + I +
Sbjct: 153 VSDLEI----IGETDHTGTTTHFVPDPEIFTETTEYDYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAAMETFMLENPDAAKKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+ + + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEDLLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|392423465|ref|YP_006464459.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
gi|391353428|gb|AFM39127.1| DNA gyrase subunit B [Desulfosporosinus acidiphilus SJ4]
Length = 644
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 389/553 (70%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+ +TVLHAGGKFGGS S Y VSGGLHGVGLSVVNALS L V V + G YHQ+Y++GKP
Sbjct: 103 VCLTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSNWLIVEVSKGGHIYHQEYAKGKP 162
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L L + + + GT+I F PD ++F + +D++ +A R+REL+FLN + I L+
Sbjct: 163 TTDL----LDIGTTEGTGTKITFMPDPEIFEDTV-YDYDILAHRLRELSFLNKSVKINLK 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E SD ++ +F GG++++V +LN K LH + + DG+ +++ +Q+ +D+
Sbjct: 218 DERSDIQET----FFHTGGIQDFVLYLNKTKDCLHPQPIFIETNKDGVQVEVCMQY-NDS 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +LSG+ +REGLT
Sbjct: 273 YTENLYSYANNINTQEGGTHEAGFKSALTRVINDYARKNNILKSSDSNLSGDDIREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+VP+P+FEGQTKT+LGN E+R +VD S E L+ +LE +P V + KSL A +A
Sbjct: 333 VVSVKVPDPQFEGQTKTKLGNSEIRGIVDSSTGEGLSTFLEENPTVTRKFIEKSLQAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQ
Sbjct: 393 RDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A+G G+ +DF RY+K+II+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDKILANAEIRAMITAMGTGIS-DDFDISKARYNKLIIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L + +Y+ PPL+KV++G+ +QY Y DAEL K+ +
Sbjct: 512 DGAHIRTLLLTFFYRYMKPLLENNYVYIAQPPLFKVKKGRDIQYAYSDAELNKILDTIGR 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P +R + Q+ IEDA + +FS LMG +V+ R+E
Sbjct: 572 EKV-EIQRYKGLGEMNPEQLWETTMDPAKRTILQVTIEDALRSEDMFSVLMGDKVEPRRE 630
Query: 540 LIQ-NAANLVNLD 551
IQ +A ++ NLD
Sbjct: 631 FIQRHAKDVRNLD 643
>gi|312878944|ref|ZP_07738744.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
gi|310782235|gb|EFQ22633.1| DNA gyrase subunit B [Aminomonas paucivorans DSM 12260]
Length = 635
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/553 (49%), Positives = 381/553 (68%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y VSGGLHGVG+SVVNALSE LEVT+WR+G E+ Q++ RG
Sbjct: 95 VVLTVLHAGAKF--DKKAYQVSGGLHGVGVSVVNALSEWLEVTIWRNGREHRQRFERGAA 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + DR+GT+++F PD+++F+T + F T+ GR+RELAFLNP +TI +
Sbjct: 153 VTELQTG----EDTDRRGTKVQFMPDEEIFST-LDFSSETLLGRLRELAFLNPGITIHFQ 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
DP ++ Y F GG+ + ++LN K+ L V R + D + +D+ALQ+ +D
Sbjct: 208 DLRQDPILEKH--YHFEGGIASFAEYLNRGKEVLFKPPVVVRGEKDNVVVDVALQY-NDT 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN I T++GGTH+ G + +LTR +N +K K +KDKD + +G+ ++EGLT
Sbjct: 265 YLERVFAFANLINTVEGGTHVSGFRTALTRAVNDQARKEKILKDKDPNFTGDDLKEGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++ P+FEGQTKT+LGN +V+ +VD V E L LE D+L ++ K++ A +A
Sbjct: 325 VVSVKLLEPQFEGQTKTKLGNGDVKGIVDSVVYEGLKALLEERADILKPVVDKAVRARQA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+ARDLVR+KS + LPGKLADCS+ PEE E++IVEG+SAGGSAK GR+R FQ
Sbjct: 385 REAAKKARDLVRRKSAMSGLDLPGKLADCSNRNPEECEVYIVEGESAGGSAKMGRNRSFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVER + NE ++ +I+ALG GV G+DF LRYHKI ++ DADV
Sbjct: 445 AILPLRGKILNVERARLDKILSNEMVRTIIQALGCGV-GDDFDYAKLRYHKIFLMADADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT F+RY + + G +YV PPLY+V+ GK V YC+ D ELK + +
Sbjct: 504 DGAHIRTLLLTLFFRYMPQIIENGHLYVAQPPLYRVQEGKTVHYCFSDKELKTLTDK--A 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ S+QR+KGLGEM P QLWETT++P R++K++ ++DA A+ +F LMG V+ R+E
Sbjct: 562 SKRVSVQRYKGLGEMNPEQLWETTMDPANRIIKRVEVDDAVTADELFGILMGDAVEPRRE 621
Query: 540 LIQNAANLV-NLD 551
I+ A V NLD
Sbjct: 622 FIETHAKEVRNLD 634
>gi|373457143|ref|ZP_09548910.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
gi|371718807|gb|EHO40578.1| DNA gyrase, B subunit [Caldithrix abyssi DSM 13497]
Length = 636
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 288/555 (51%), Positives = 387/555 (69%), Gaps = 16/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T LHAGGKF ++ Y VSGGLHGVG SVVNALSE +V ++R+ Y Q Y RG P
Sbjct: 93 IIMTTLHAGGKFDKNT--YKVSGGLHGVGASVVNALSEWCKVEIYRNNKIYQQVYERGAP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D++GT+I F D ++F I + +A R+RELAFLN L I +
Sbjct: 151 VTELKI----IGETDKRGTKITFLADSEIFK-KISYKFEVLANRLRELAFLNKNLKITIV 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E +D ++ Y + GGL+E+V +L+ + PLH+ + F + DGI +++ALQ+ + A
Sbjct: 206 DERNDIQET----YQYEGGLKEFVAYLDASRTPLHEEPIYFEGERDGIPVEIALQYNT-A 260
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
Y++ +L Y N++ T++GGTH+ G K++LTRT+NS +K +K+ D I+LSGE VREGLT
Sbjct: 261 YTENILTYCNNVNTMEGGTHLSGFKSALTRTINSYAQKYNFIKNNDKINLSGEDVREGLT 320
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+VP P+FEGQTKT+LGN EVR V+ V E L E+LE +P V I+ K +SA +
Sbjct: 321 AVISVKVPEPQFEGQTKTKLGNSEVRGAVETLVNEKLFEFLEQNPAVARPIIEKCISAAR 380
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR+L R+K+VL SSSLPGKLADCSS P+ESE+++VEGDSAGGSAKQ RDRRF
Sbjct: 381 AREAARQARELTRRKTVLDSSSLPGKLADCSSNDPKESELYLVEGDSAGGSAKQARDRRF 440
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + N+EI+ +I A+G G+ + F E RY KIII+TDAD
Sbjct: 441 QAILPLKGKILNVEKARLDKILSNDEIKTIITAIGTGIGSDSFDIEKRRYDKIIIMTDAD 500
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSF 477
VDGAHIRTLLLTFFYRY L +G IY+ PPLYK++ GKQ Y +DD E ++ +K
Sbjct: 501 VDGAHIRTLLLTFFYRYMGELIQQGKIYIAQPPLYKIKNGKQEFYAFDDEEKERIIKELG 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM P QLWETT+NPE R + Q+ I++A EA+ +F+ LMG V R
Sbjct: 561 VDESKVVIQRYKGLGEMNPEQLWETTMNPETRTILQVSIDNAMEADQIFTILMGEEVAPR 620
Query: 538 KELIQNAANLV-NLD 551
K+ I+ A V NLD
Sbjct: 621 KKFIEENAQFVRNLD 635
>gi|222100717|ref|YP_002535285.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
gi|221573107|gb|ACM23919.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359]
Length = 636
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 287/563 (50%), Positives = 394/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V+RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVYRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTLVEV----IGETDKHGTVVRFKPDPLIFSET-EFDPDILEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK--------DVDGITIDLA 172
E D N+ + F GGL+E+V++LN KK LHDV+ ++ D + +++A
Sbjct: 201 -EFEDRINNEKKTFKFDGGLKEFVKYLNRGKKVLHDVIYLKRTEKVKVKDKEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ +L +AN+I+T+DGGTH+ K +LTR +N G+K +K+ D S G+
Sbjct: 260 FQY-TDSYSEEILSFANTIKTVDGGTHVTAFKTTLTRLMNEYGRKHNFLKNGD-SFQGDD 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT +ISV V NPEFEGQTK++LGN EV++ V+++++E L + + PD++ +ILSK
Sbjct: 318 VREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVNRAMREELKKIFDASPDLVRTILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AA+RAR++VR+K+VL+S++LPGKLADCSST E +E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAARRAREMVRRKNVLQSTTLPGKLADCSSTDRENTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF LRY KII
Sbjct: 438 ARDRVFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTGI-GDDFDINKLRYGKII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY K L ++G IY+ +PPLY++ GK+ Y Y DAEL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMKPLIEDGRIYIALPPLYRIRVGKEDFYVYSDAELME 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
+ F + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YRKMFEGKKM-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|217967929|ref|YP_002353435.1| DNA gyrase subunit B [Dictyoglomus turgidum DSM 6724]
gi|217337028|gb|ACK42821.1| DNA gyrase, B subunit [Dictyoglomus turgidum DSM 6724]
Length = 635
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 289/555 (52%), Positives = 398/555 (71%), Gaps = 20/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S+S Y +SGGLHGVGLSVVNALS LEV V RDG ++Q Y +GKP
Sbjct: 96 VVLTTLHAGGKF--SNSIYKISGGLHGVGLSVVNALSSKLEVEVMRDGKIFYQGYEKGKP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V LT D GT+IRF+PD ++F T +FD++ +A R+RELAFLNP +TI LR
Sbjct: 154 VMPLTVR----GETDETGTKIRFYPDSEIFETT-KFDYDIVANRLRELAFLNPNVTIELR 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E + + N + + GGL E++++L+ K+ LH+ + R++ + + +++ +Q+ S Y
Sbjct: 209 DERT----GKSNVFKYEGGLLEFIEYLSKGKEILHEPIYMRREEENLIVEIVMQYNS-GY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +L YAN+I TI+GGTH+ G + +LTR +N+ + K+ + SLSG+ VREGLT I
Sbjct: 264 DELILSYANNIHTIEGGTHVTGFRTALTRVVNNFARNWGLWKENE-SLSGDDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E LTEY +P+V I+SK + A +A
Sbjct: 323 VSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEEELTEYFSENPEVGKLIISKIIEAYRAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+LVR+KS+L SS LPGKLADCS PE+ E+FIVEG+SAGGSAKQ RDRR+QA
Sbjct: 383 QAARKARELVRRKSLLESSLLPGKLADCSERDPEKCELFIVEGESAGGSAKQARDRRYQA 442
Query: 361 ILPLRGKILNVERKDE-AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
ILPLRGKILNVE+ + +EEI+ +I +LG G+ G+DF LRYHKIII+TDADV
Sbjct: 443 ILPLRGKILNVEKAQHLTKILSSEEIKAIIASLGTGI-GQDFDLSKLRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV--KSSF 477
DGAHIRTLLLTFFYR+ + L + G IY+ PPLY +++GK+ +Y Y + E +++ + +
Sbjct: 502 DGAHIRTLLLTFFYRHFRPLIEGGYIYIAQPPLYLLKKGKEERYAYSEEEKEEILREWGY 561
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P N IQR+KGLGEM P QL ETT++P++R+L Q+ IEDA EA +FS LMG V+ R
Sbjct: 562 PDNVY--IQRYKGLGEMDPEQLRETTMDPQKRILLQVTIEDALEAERLFSILMGNNVEER 619
Query: 538 KELIQNAANLV-NLD 551
+ I+ A V NLD
Sbjct: 620 RSFIEQKAKFVRNLD 634
>gi|443631606|ref|ZP_21115787.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443349411|gb|ELS63467.1| DNA gyrase, B subunit [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 638
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT F PD ++FT +D++ +A R+RELAFL + I +
Sbjct: 153 VADLEI----IGETDHTGTTTHFIPDPEIFTETTVYDYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAAMETFMLENPDAAKKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++ + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|430751860|ref|YP_007214768.1| DNA gyrase subunit B [Thermobacillus composti KWC4]
gi|430735825|gb|AGA59770.1| DNA gyrase, B subunit [Thermobacillus composti KWC4]
Length = 636
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 287/556 (51%), Positives = 384/556 (69%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE L V V RDG + Q+Y RG P
Sbjct: 95 VVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHLCVEVKRDGHIHRQEYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D GT I F PD ++FT +F+++T+ RIRELAFLN + I LR
Sbjct: 153 LYDVRI----VGDTDETGTIITFKPDPEIFTETTEFEYDTLQTRIRELAFLNKGIKIVLR 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E + + Y + GG+ E+VQ+LN +++PLH+ + G R D I +++ALQ+
Sbjct: 209 DERTGAS----DTYKYDGGIIEFVQYLNRNREPLHEQPIYIEGMR---DNIQVEIALQY- 260
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + +AN+I T +GGTH G K++LTR +N +++ +KD D +L+GE VREG
Sbjct: 261 NDSYNENIYSFANNIHTHEGGTHESGFKSALTRIINDYARRAGLLKDSDSNLTGEDVREG 320
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN E R +V+ E L E+L+ +P V I+ K + A
Sbjct: 321 LTAIISVKIPEPQFEGQTKTKLGNSEARSIVESMFAEKLQEFLDENPSVSRRIVEKGVQA 380
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+K+ L S+LPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 381 ARAREAARKARELTRRKNALEVSALPGKLADCSSRDASISELYIVEGDSAGGSAKQGRDR 440
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYHKIII+TD
Sbjct: 441 HFQAILPLRGKILNVEKARLDRILANSEIRAIITALGTGI-GEDFDLSKARYHKIIIMTD 499
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYK+ER K V+Y +D E ++ +
Sbjct: 500 ADVDGAHIRTLLLTFFYRYMRQIIEAGYVYIAQPPLYKIERNKVVRYALNDKERDEILAE 559
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A +IQR+KGLGEM QLWETT++PE R + Q+ I+DA A+ +F +LMG V+
Sbjct: 560 FGEGAKVNIQRYKGLGEMDAEQLWETTMDPESRTMLQVTIQDAIAADAIFDTLMGDDVEP 619
Query: 537 RKELIQNAANLV-NLD 551
R+E IQ A V NLD
Sbjct: 620 RREFIQAHAKFVKNLD 635
>gi|350264106|ref|YP_004875413.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349596993|gb|AEP84781.1| DNA gyrase, B subunit [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 638
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L VTV RDG + Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELVVTVHRDGKIHRQTYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + D GT F PD ++FT ++D++ +A R+RELAFL + I +
Sbjct: 153 VSDLEI----IGETDHTGTTTHFVPDPEIFTETTEYDYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+ + + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEDLLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|403382763|ref|ZP_10924820.1| DNA gyrase subunit B [Paenibacillus sp. JC66]
Length = 636
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 284/553 (51%), Positives = 381/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHVIVQVSRDGKIYQQEYRRGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V +R GT+ F PD ++F ++++ + RIRELAFLN + I +
Sbjct: 153 ----QYDVKVVGDTERTGTKTTFLPDPEIFKETTVYEYDILQSRIRELAFLNKGIEINIL 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E +D EKN + + GG++ +V++LN ++ LHD + + D I +++ALQ+ +D+
Sbjct: 209 DERTD-EKNSFK---YDGGIKSFVEYLNEKREVLHDEPIYTEGTKDNIQVEIALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+++ + +AN+I T +GGTH G K++LTR LN +KS ++KD D +L+G+ VREGLT
Sbjct: 264 FTENIYSFANNINTHEGGTHESGFKSALTRILNDYARKSNSIKDSDANLTGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE HP V I+ K + A +A
Sbjct: 324 IISVKIPEPQFEGQTKTKLGNSEVRGIVESLFSEKLQEFLEEHPSVSRKIMEKGIQAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCSS SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAARKARELTRRKNALEVSSLPGKLADCSSKDASISEIYIVEGDSAGGSAKQGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I ALG G+ G DF RYHK+II+TDADV
Sbjct: 444 AILPLRGKILNVEKARLDKILSNAEIRAIITALGTGI-GADFDISKARYHKVIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ER K V+Y Y++ + +++ F
Sbjct: 503 DGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLYKLERNKIVRYAYNEKQREEITKEFGE 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
++QR+KGLGEM QLWETT++PE R Q+ I+DA EA+ VF +LMG V+ R++
Sbjct: 563 GTKINVQRYKGLGEMNASQLWETTMDPESRTFLQVTIQDAIEADRVFDTLMGDNVEPRRD 622
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 623 FIQEHAKYVTNLD 635
>gi|407472538|ref|YP_006786938.1| DNA gyrase subunit B [Clostridium acidurici 9a]
gi|407049046|gb|AFS77091.1| DNA gyrase subunit B [Clostridium acidurici 9a]
Length = 636
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/552 (49%), Positives = 385/552 (69%), Gaps = 16/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF G + Y VSGGLHGVG+SVVNALSE LEV + R+G + Q++ G P
Sbjct: 98 VLTVLHAGGKFDGGA--YKVSGGLHGVGVSVVNALSEWLEVVIKREGKIHKQRFEIGIPQ 155
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L + D GT I F PD +F ++F + T+ R+RELAFLN + I
Sbjct: 156 TELEV----IGDSDETGTTITFMPDATIFD-EVEFKYETLEYRLRELAFLNKGVKIIF-- 208
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D N+ E+F+ GG++ +V+++N +K +H DV+ F + + ++LALQ+ +D Y
Sbjct: 209 --EDKRTNKEQEFFYEGGIKAFVEYMNRNKDSIHSDVIYFEGEREDSVVELALQYTTD-Y 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ +L +AN+I T +GG+H+ G++++LTR +N + + +K+KD +L+G+ VREG+T +
Sbjct: 266 SENILAFANNINTHEGGSHLSGLRSALTRVINDYARTNSLLKEKDENLTGDDVREGITAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ P+FEGQTKT+LGN E+R +V+ V + L +LE +P I+ K + A +
Sbjct: 326 LSVKLSEPQFEGQTKTKLGNSEMRGIVEGVVYDSLNRFLEENPKEAKIIIDKGIKAARVR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+K+VL SS+LPGKLADCS PE+ EI+IVEG+SAGGSAKQGRDR QA
Sbjct: 386 EAARKARELTRRKNVLESSALPGKLADCSERDPEKCEIYIVEGNSAGGSAKQGRDRSTQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+N+E+ + ++EI+N+I A G G+ GEDF +RY KI+I+TDADVD
Sbjct: 446 ILPLRGKIMNIEKARLDKILSSDEIKNMITAFGCGI-GEDFDPNKIRYGKIVIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY K L + G I++ PPLYKV++GK +Y YDD EL+ V
Sbjct: 505 GAHIRTLLLTFFYRYMKPLIENGNIFIAQPPLYKVKKGKVEKYAYDDRELEVVLDEIGRT 564
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
YS+QR+KGLGEM P QLW+TT+NPE R + Q+ IEDAA A+ +F++LMG +V R+E
Sbjct: 565 G-YSLQRYKGLGEMNPEQLWDTTMNPETRTMLQVNIEDAAAADDIFTTLMGDKVKPRREF 623
Query: 541 I-QNAANLVNLD 551
I +NA N+ NLD
Sbjct: 624 IEENALNVKNLD 635
>gi|20090442|ref|NP_616517.1| DNA topoisomerase subunit B [Methanosarcina acetivorans C2A]
gi|19915457|gb|AAM04997.1| DNA topoisomerase (ATP-hydrolyzing), subunit B [Methanosarcina
acetivorans C2A]
Length = 634
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 287/553 (51%), Positives = 383/553 (69%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE L V V RDG +Y Q+Y RGKP
Sbjct: 94 VVMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWLNVEVERDGKKYFQRYIRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + GT+ F PD ++F T F ++ ++ R+RELAFLN LTI L
Sbjct: 152 ----EAEVQETGTSEITGTKTTFKPDARIFETT-DFQYDILSNRLRELAFLNRGLTINL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A+Q+ +++
Sbjct: 206 KDLRSPE-GQAETFIYSGGIVEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIAMQY-TNS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+ VREGLT
Sbjct: 264 YTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DAKLTGDDVREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKTRLGN EV+ +VD V + L EY E +P V + IL K+L A KA
Sbjct: 323 IISVKLMEPQFEGQTKTRLGNSEVKGIVDSLVTDGLAEYFEENPKVANVILEKALLAQKA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L S+LPGKLADCS P EI+IVEG+SAGGSAKQGRDR FQ
Sbjct: 383 REAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVCEIYIVEGNSAGGSAKQGRDRGFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ A + KN E+ +LI ALG GV EDF E+ RYHK+I++TDADV
Sbjct: 443 AILPLRGKILNVEKSRLAKILKNNEVVSLITALGTGV-SEDFALESARYHKVILMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT F+RY + L D G +Y+ PPLY++++GK Y + D EL+ K
Sbjct: 502 DGAHIRTLLLTLFFRYMRPLIDAGYVYIAQPPLYRIKKGKSEYYIHSDRELEVKKKELGE 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
L +IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA A+ +F LMG V+ R+
Sbjct: 562 KGL-AIQRYKGLGEMNPEQLWETTMNPESRTLLQVTLEDALRADEIFRVLMGDEVEPRRN 620
Query: 540 LIQ-NAANLVNLD 551
I+ +A +V+LD
Sbjct: 621 FIETHAKEVVDLD 633
>gi|385799929|ref|YP_005836333.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309389293|gb|ADO77173.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 638
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/549 (49%), Positives = 381/549 (69%), Gaps = 13/549 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF SS Y VSGGLHGVG+SVVNALS LE+T +G +Y Q Y +G P
Sbjct: 97 VVLTTLHAGGKFNNSS--YKVSGGLHGVGVSVVNALSSELEITTHWEGHKYQQHYKKGAP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + +R GT IRF PD ++FT A +F +A R++E A+LN +LT++LR
Sbjct: 155 VDKLK----KIGKTERSGTIIRFKPDSEIFT-AREFKFENLAHRLQESAYLNKELTLSLR 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D E+ E+ + GG++ +V++LN D+ ++ D++ F D +++A+Q+ +D
Sbjct: 210 --DERGEEVVEKEFQYDGGIKAFVEFLNKDRNIINNDIIYFESKPDDYEVEIAVQY-NDG 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + YAN+I TIDGG H+ G K +LTR +N+ K + + K SL+G+ VREG+T
Sbjct: 267 YNERIFSYANNINTIDGGYHLTGFKTALTRAVNNFAKNNNKLPAKISSLNGKDVREGITA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+I+V++P P+FEGQTKT+LGN E+R +V+ V +YL+ Y + +PD+ I+ K++ A++A
Sbjct: 327 VINVKLPEPQFEGQTKTKLGNSEIRSIVESEVYQYLSLYFDTNPDLAKKIIDKAVQAVRA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
A+K+AR+L ++K+ L S+SLPGKLADCSS EESE+FIVEGDSAGGSAKQGR+R+FQ
Sbjct: 387 RKASKKARELTKRKTALSSNSLPGKLADCSSKKSEESELFIVEGDSAGGSAKQGRERKFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVER + N E+ +I ALG G+ GEDF E LRYHKI+I+TDADV
Sbjct: 447 AILPLKGKILNVERARLDKILNNNEVAAIITALGAGI-GEDFNLEKLRYHKIVIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LT FYRY L + G IY+ PPLYKV + K+ Y Y D L+ +
Sbjct: 506 DGAHIATLILTLFYRYMPELIENGHIYLAKPPLYKVTKRKKSHYLYSDQALETFRKE-NE 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N+ +S+QR+KGLGEM P QLW TT++P+ R+L+++ I+D EA+ +F+ LMG+ RKE
Sbjct: 565 NSSFSLQRYKGLGEMNPEQLWATTMDPQNRVLQKVEIDDKIEADDIFTRLMGSNASLRKE 624
Query: 540 LIQNAANLV 548
I N A L
Sbjct: 625 FIFNNAELA 633
>gi|116754690|ref|YP_843808.1| DNA gyrase, B subunit [Methanosaeta thermophila PT]
gi|116666141|gb|ABK15168.1| DNA gyrase subunit B [Methanosaeta thermophila PT]
Length = 628
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 387/553 (69%), Gaps = 20/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V R+G Y Q+Y RG+P
Sbjct: 93 IVMTVLHAGGKFDHDT--YHVSGGLHGVGVSVVNALSEWLEVEVSREGRVYRQRYERGRP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + GT +RF PD ++F F + ++ R+RELAFLN L I++
Sbjct: 151 VSDLQ----ETGVSENTGTTVRFKPDPEIFEVT-DFSFDVLSSRLRELAFLNRGLKISIT 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E S K + + GG+ +VQ+LN K+ LH + + F + D +++++A+Q+ + +
Sbjct: 206 DERSGRSKT----FHYDGGIISFVQYLNKSKEVLHPNPIYFSRVRDDVSVEVAMQYNT-S 260
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++++ +AN+I T +GGTH+ G +A+LT+T+N ++ K +K D L+G+ +REGL
Sbjct: 261 YNESVFTFANNINTREGGTHLSGFRAALTKTVNDFVREKKLLKG-DAKLTGDDLREGLVA 319
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SVR+P+P+FEGQTKTRLGN VR +V+ V E L EY EL+P V ++I+ K+ A++A
Sbjct: 320 VVSVRLPDPQFEGQTKTRLGNSAVRGLVESLVSEGLMEYFELNPQVAEAIVEKATEAMRA 379
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A+++ R+K+ L SS LPGKLADC P +SE++IVEG+SAGGSAKQGR+R FQ
Sbjct: 380 REAARKAKEITRRKTALTSSGLPGKLADCVERDPAKSELYIVEGESAGGSAKQGRNRHFQ 439
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPLRGKILNVER M KNEEI+NLI ALG G+ G+DF RYHKIII+TDADV
Sbjct: 440 AVLPLRGKILNVERARLDKMLKNEEIRNLITALGTGI-GDDFDITKARYHKIIIMTDADV 498
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFFYRY + L + G +Y+ PPLY+V +GK V+Y Y D EL K+
Sbjct: 499 DGSHIRTLLLTFFYRYMQPLIEAGYVYIAQPPLYQVRKGKSVKYAYSDEELAKLL----E 554
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM P QLWETT+NPE+R L ++ ++DA EA+ +FS LMG +V+ R+
Sbjct: 555 DGKAVVQRYKGLGEMNPEQLWETTMNPEKRTLLRVTLKDAVEADEIFSVLMGEQVEPRRV 614
Query: 540 LIQNAANLV-NLD 551
I+ A V NLD
Sbjct: 615 FIETHAREVRNLD 627
>gi|398309108|ref|ZP_10512582.1| DNA gyrase subunit B [Bacillus mojavensis RO-H-1]
Length = 638
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 380/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y+RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQVYNRGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + D GT F PD ++FT +++++ +A R+RELAFL + I +
Sbjct: 153 VSDLEV----IGETDHTGTTTHFVPDPEIFTETTEYEYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDG 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAALETFMLENPDAARKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L+++ + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLEELLQTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|296330042|ref|ZP_06872526.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672704|ref|YP_003864375.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
gi|296153081|gb|EFG93946.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410947|gb|ADM36065.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23]
Length = 638
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 377/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L VTV RDG + Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELVVTVHRDGKIHRQTYKRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + D GT F PD ++FT +D++ +A R+RELAFL + I +
Sbjct: 153 VSDLEI----IGETDHTGTTTHFVPDPEIFTETTVYDYDLLANRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L ++ +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSAALETFMLENPDAAKKIVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+ + + P
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEDLLKTLPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|381210628|ref|ZP_09917699.1| DNA gyrase subunit B [Lentibacillus sp. Grbi]
Length = 641
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 378/552 (68%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S+ Y VSGGLHGVG SVVNALS SL+V V RDG Y+ + +G P
Sbjct: 100 VIMTVLHAGGKF--SNDSYKVSGGLHGVGASVVNALSSSLDVYVHRDGNIYYLGFQKGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT+ +F PD ++F + +F+ + R+RELAFLN +TI+L
Sbjct: 158 QGKIET----IGETDITGTKTQFKPDPEIFVESTEFNFELLEQRVRELAFLNKGITISLE 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
+ +D E EY + GG+ YV+++N +++ LH+ + D I +++A+Q+ +D +
Sbjct: 214 DKRTDQEPV---EYHYEGGISSYVKYINRNREVLHEPFYSETEDDQIMVEVAIQY-NDGF 269
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GG+H G K+ LTR +N +K+ K+ D +LSG+ VREGLT I
Sbjct: 270 ASNIYSFANNIHTYEGGSHESGFKSGLTRAINDYARKNSMFKENDPNLSGDDVREGLTAI 329
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN EV+KV D + E +++L +PDV ++ K L A +A
Sbjct: 330 VSIKHPDPQFEGQTKTKLGNSEVKKVTDSAFSEAFSKFLFENPDVAKLVVEKGLMASRAR 389
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
LAAK+AR+L R+KS L S+LPGKLADCSS E++IVEGDSAGGSAKQGRDR FQA
Sbjct: 390 LAAKKARELTRRKSALEVSNLPGKLADCSSRDASIGELYIVEGDSAGGSAKQGRDRHFQA 449
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N+E++ +I ALG G+ GEDF RYHKI+I+TDADVD
Sbjct: 450 ILPLRGKILNVEKARLDKILSNKEVRAMITALGTGI-GEDFDITKARYHKIVIMTDADVD 508
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY + L + G +Y+ PPLYK+++GK Y YDD E++++ + P +
Sbjct: 509 GAHIRTLLLTFFYRYMRPLIEHGYVYIAQPPLYKIQQGKAAHYAYDDKEMERILNELPKS 568
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM QLWETT++PE R L Q+ + DA +A+ +F LMG +V+ R+
Sbjct: 569 PKPGLQRYKGLGEMNAEQLWETTMDPETRTLLQVGLSDAMDADNIFDMLMGDKVEPRRNF 628
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 IEENAQYVQNLD 640
>gi|256826465|ref|YP_003150424.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
gi|256582608|gb|ACU93742.1| DNA gyrase subunit B [Cryptobacterium curtum DSM 15641]
Length = 645
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/559 (50%), Positives = 389/559 (69%), Gaps = 13/559 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG Y +SRGK
Sbjct: 96 VVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTQMKVQVCRDGKRYEITFSRGKT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L HV+ DSK GT +RFWPD ++FT F++NT+A R RE+AFLN L I L
Sbjct: 154 VEKL--HVVG-DSK-HTGTTVRFWPDPEIFTETTVFNYNTLAERFREMAFLNKGLKITLY 209
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E + D E +E F F G++++V++L T K+ L+ + F + +++A+QW S
Sbjct: 210 DERELDGEGVAKHETFQFQDGIKDFVKFLTTGKEVLNTKPIYFEAEGPAGEVEVAMQWTS 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++++ +AN+I TI+GGTH++G K ++TRT+N ++ +K+KD +L+G+ REGL
Sbjct: 270 SFSTNSVFSFANNINTIEGGTHLDGFKQAVTRTINDYAREKGILKEKDSNLTGDDCREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
+ +ISV++ +P+FEGQTKT+LGN E+R++V +V + L EYLE +P I++K+ AL
Sbjct: 330 SAVISVKLHDPQFEGQTKTKLGNSEMRQLVSSAVNQGLGEYLEENPTPAKRIINKASQAL 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++AR++ R+K+VL S +LPGKLADCSS + E+FIVEGDSAGGSAKQ RDR+
Sbjct: 390 KAREAARKAREMTRRKNVLDSFALPGKLADCSSKNAADCEMFIVEGDSAGGSAKQARDRK 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
+QAILPLRGKILNVER ++ I +LI A+G + G+DF E RYH+III+TDA
Sbjct: 450 YQAILPLRGKILNVERAGLHRALSSDTISSLITAVGTNI-GDDFDAEKARYHRIIIMTDA 508
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSS 476
DVDGAHI+ LLLTFFYRY L + G IY+ +PPLY ++ G K+++Y Y+D L +
Sbjct: 509 DVDGAHIQILLLTFFYRYMPELINRGYIYIAMPPLYGIKEGKKKIRYVYNDNALAEAMKD 568
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+P++ S+QR+KGLGEM P QLWETT+ PE R+L Q+ IEDAA A S LMG +V+
Sbjct: 569 YPTDKKPSVQRYKGLGEMDPDQLWETTMEPETRILMQVGIEDAAAAERAVSELMGDQVEP 628
Query: 537 RKELIQNAANLVNLDHLDI 555
RKE IQ A V LDI
Sbjct: 629 RKEYIQKHAKDVRF--LDI 645
>gi|452974104|gb|EME73926.1| DNA gyrase subunit B [Bacillus sonorensis L12]
Length = 637
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 385/553 (69%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV+RDG ++Q+Y RG P
Sbjct: 94 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVYRDGKVHYQEYERGVP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT F PD ++FT ++D++T+A R+RELAFL + I +
Sbjct: 152 KADLKV----IGDTDVTGTTTHFKPDPEIFTETTEYDYDTLATRVRELAFLTKGVKITI- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + NEY + GG++ YV+ LN ++ +H+ V DGIT+++ALQ+ +D+
Sbjct: 207 -EDKREGKERKNEYCYEGGIKSYVEHLNRSREVIHEEPVYIEGSKDGITVEVALQY-NDS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K LTR +N +++ K+ D +LSGE VREGLT
Sbjct: 265 YTSNIYSFANNIHTYEGGTHEAGFKTGLTRVINDYARRNGVFKENDPNLSGEDVREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E L ++L +PD I+ K + A +A
Sbjct: 325 IISIKHPDPQFEGQTKTKLGNSEARAITDALFSEALEKFLLENPDSAKKIVEKGVMAARA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 385 RMAAKKARELTRRKSALEVSNLPGKLADCSSKDPTISELYIVEGDSAGGSAKQGRDRHFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 445 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + ++G +Y+ PPLYK+++GK+V+Y Y+D +L+++ P
Sbjct: 504 DGAHIRTLLLTFFYRYMRQIIEQGYVYIAQPPLYKIQQGKRVEYAYNDKQLEEILKELPQ 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N +QR+KGLGEM QLWETT++P+ R L Q+ ++DA +A+ F LMG +V+ R+
Sbjct: 564 NPKPGLQRYKGLGEMNATQLWETTMDPDTRTLLQVTLKDAIDADETFEMLMGDKVEPRRN 623
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 624 FIEENARYVKNLD 636
>gi|138893684|ref|YP_001124137.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
gi|134265197|gb|ABO65392.1| DNA gyrase subunit B [Geobacillus thermodenitrificans NG80-2]
Length = 640
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 294/556 (52%), Positives = 382/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++QKY RG+P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQKYERGEP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L +D DR GT RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 156 RTDLQV----IDETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITLT 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D N+ NEYF+ GG+ YV+ LN ++ LH+ + G R DGI +++ALQ+
Sbjct: 212 DERVD---NRKNEYFYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAVEIALQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ + + N+I T +GGTH G K +LTR +N +K + KD D +L+GE VREG
Sbjct: 265 NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKDNDANLTGEDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P P+FEGQTKT+LGN + R V D E +L HP V I+ K + A
Sbjct: 325 LTAIVSIKHPAPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLEHPAVARKIVEKGMMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 385 ARARVAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++ +I ALG G+ GEDF RYHK+II+TD
Sbjct: 445 HFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEDFDISKARYHKVIIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRYMRELIERGYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P+ IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F LMG +V+
Sbjct: 564 LPAQPKPMIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEILMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENARYVKNLD 639
>gi|196249898|ref|ZP_03148594.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
gi|196210774|gb|EDY05537.1| DNA gyrase, B subunit [Geobacillus sp. G11MC16]
Length = 640
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 294/556 (52%), Positives = 382/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++QKY RG+P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQKYERGEP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L +D DR GT RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 156 RTDLQV----IDETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITLT 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D N+ NEYF+ GG+ YV+ LN ++ LH+ + G R DGI +++ALQ+
Sbjct: 212 DERVD---NRKNEYFYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAVEIALQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ + + N+I T +GGTH G K +LTR +N +K + KD D +L+GE VREG
Sbjct: 265 NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKDNDANLTGEDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P P+FEGQTKT+LGN + R V D E +L HP V I+ K + A
Sbjct: 325 LTAIVSIKHPAPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLEHPAVARKIVEKGMMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A +AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 385 ARARVAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++ +I ALG G+ GEDF RYHK+II+TD
Sbjct: 445 HFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEDFDISKARYHKVIIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRYMRELIERGYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P+ IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F LMG +V+
Sbjct: 564 LPAQPKPMIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEILMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENARYVKNLD 639
>gi|392956558|ref|ZP_10322085.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
gi|391877540|gb|EIT86133.1| DNA gyrase subunit B [Bacillus macauensis ZFHKF-1]
Length = 640
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/553 (49%), Positives = 382/553 (69%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS ++VTV+RDG +HQKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSEMDVTVYRDGHIHHQKYHRGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI-AL 119
V+ L + +GT+I F PD ++FT ++D T++ RIRELA+LN + I A+
Sbjct: 156 VSDLEV----IGETTERGTKIHFVPDTEIFTETTEYDFATLSQRIRELAYLNRGIKICAV 211
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
+ + +P K E+ + GG++ YV+ +N ++ LH+ + + +GI++++ALQ+ +D+
Sbjct: 212 DQREENPTKQ---EFHYEGGIKSYVEHINRSREVLHEPIFIEGEKEGISLEIALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N G+K+ K D +L+G+ VREGLT
Sbjct: 268 YTSNIYSFANNISTHEGGTHESGFKTALTRVINDYGRKNNYFKGSDTNLTGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + + E+ + ++ +PDV +L K + AL+A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITESLFSEHFSSFMLENPDVAKRVLEKGMMALRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+ R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RVAAKKAREFTRRKSALEVSSLPGKLADCSSKDASVSELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ GEDF RYHK+II+TDADV
Sbjct: 448 AILPLRGKIINVEKARLDKILSNNEIRAIITALGTGI-GEDFDISKARYHKVIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+++Y YDD E+ ++ P
Sbjct: 507 DGAHIRTLLLTFFYRYMRPIIEHGYVYIAQPPLYKVQQGKRIEYAYDDKEMDRIMKELPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM P QLWETT++P+ R L Q+ ++DA +A+ F LMG +V+ R++
Sbjct: 567 QPKPGVQRYKGLGEMNPTQLWETTMDPQTRTLLQVELKDAMDADETFEILMGDKVEPRRD 626
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 627 FIQEHAQYVENLD 639
>gi|27262246|gb|AAN87404.1| DNA gyrase subunit B [Heliobacillus mobilis]
Length = 641
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/551 (51%), Positives = 390/551 (70%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKFGG GY VSGGLHGVGLSVVNALSE L+VTV R+G + Q Y RG +T
Sbjct: 104 LTVLHAGGKFGGE--GYKVSGGLHGVGLSVVNALSEKLKVTVRRNGKVHEQYYERGVTMT 161
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L V + + GT I F PD +F +++ + T++ R+REL+FLN + I L+
Sbjct: 162 DLKV----VGNAESTGTTIYFKPDGLIFE-ELEYSYETLSHRLRELSFLNRGVKITLK-- 214
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
D Q + + GG+ ++V++LN +K +H V+ F+ + +G+ +++ALQ+ +D YS
Sbjct: 215 --DLRTGQESIFAHEGGIIDFVKFLNRNKDLIHPHVIYFQNEKEGVHVEMALQY-NDGYS 271
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+T+ YAN+I T +GGTH G K +LTR +N G++ +K+ D +LSGE +REG+T +I
Sbjct: 272 ETLFSYANNINTQEGGTHESGFKTALTRVINDYGRRINQIKENDSNLSGEDIREGITAVI 331
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+V P+FEGQTKT+LGN EVR + D V E L+ YLE +P V ++ K+LSA++A
Sbjct: 332 SVKVREPQFEGQTKTKLGNSEVRGITDSCVTEGLSTYLEENPSVGKKVIEKALSAMRARE 391
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+SLPGKLADCS P E++IVEGDSAGGSAKQGRDRRFQAI
Sbjct: 392 AARKARELTRRKSALESTSLPGKLADCSFKDPSMCELYIVEGDSAGGSAKQGRDRRFQAI 451
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + NEEI+ LI ALG G+ GEDF RYH++ ++TDADVDG
Sbjct: 452 LPLRGKILNVEKSRLDKILSNEEIRALITALGTGI-GEDFDLSKARYHRVCLMTDADVDG 510
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFF+R+ K L + G +Y+ PPLY+V++G+ V+Y Y D EL + +
Sbjct: 511 SHIRTLLLTFFFRHMKPLIENGYVYIAQPPLYQVKKGRDVRYYYHDNELNQYLDKNGRDG 570
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ +IQR+KGLGEM P QLW+TT++PE R + Q+ +EDAAEA +F++LMG RV+ R+E I
Sbjct: 571 V-TIQRYKGLGEMNPEQLWDTTMDPEHRTILQVSMEDAAEAESIFTTLMGDRVEPRREFI 629
Query: 542 Q-NAANLVNLD 551
Q +A ++ NLD
Sbjct: 630 QSHAKDVRNLD 640
>gi|365874562|ref|ZP_09414095.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
gi|363984649|gb|EHM10856.1| DNA gyrase, B subunit [Thermanaerovibrio velox DSM 12556]
Length = 636
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/556 (49%), Positives = 381/556 (68%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y VSGGLHGVG+SVVNALSE LEVT+WR+ E+ Q Y RG P
Sbjct: 95 VVLTVLHAGAKF--DKKAYQVSGGLHGVGVSVVNALSEWLEVTIWRNRKEHRQSYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D++GTR+ F PD ++F+T ++F + + GR+RELAFLNP +TI
Sbjct: 153 VTDLVIG----EDTDKRGTRVHFMPDGEIFST-LEFSSDVLLGRLRELAFLNPGVTIIFT 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK----KPLHDVVGFRKDVDGITIDLALQWC 176
+P + + F GG+ +V++LN K KP V G + DG+ +++ALQ+
Sbjct: 208 DLRQNPPLER--KLHFEGGIASFVEYLNRGKEVLFKPPMVVKG---EKDGVIVEVALQY- 261
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y + + +AN I T++GGTH+ G + +LTR +N +K K +KDKD + SG+ ++EG
Sbjct: 262 NDTYLERIFAFANLINTVEGGTHVSGFRTALTRIINDQARKEKLLKDKDPNFSGDDLKEG 321
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV++ P+FEGQTKT+LGN +V+ +VD V E L LE P VL ++ K++ A
Sbjct: 322 LTAVISVKLLEPQFEGQTKTKLGNGDVKGIVDSVVYEGLKVLLEDQPQVLRPVVEKAVKA 381
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+ARDLVR+KS + LPGKLADCS+ PEE E++IVEGDSAGGSAK GRDR
Sbjct: 382 RQAREAAKKARDLVRRKSAMSGMDLPGKLADCSNRKPEECELYIVEGDSAGGSAKMGRDR 441
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N++++ +I+ALG GV G++F LRYHKI ++ D
Sbjct: 442 SFQAILPLRGKILNVEKARLDKILSNDQVRTIIQALGCGV-GDEFDYSKLRYHKIFLMAD 500
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLT F+RY + + G +YV PPLY+V+ G+ V YCY D EL+++
Sbjct: 501 ADVDGAHIRTLLLTLFFRYMPQIIENGHLYVAQPPLYRVQEGRNVHYCYSDRELRELMQR 560
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
S S+QR+KGLGEM P QLWETT++P R++K++ +EDA A+ +FS LMG V
Sbjct: 561 L-SGKKASVQRYKGLGEMNPEQLWETTMDPANRVIKRVEVEDAVLADELFSILMGDAVGP 619
Query: 537 RKELIQ-NAANLVNLD 551
R+E I+ +A + NLD
Sbjct: 620 RREFIEAHAKEVRNLD 635
>gi|323450751|gb|EGB06631.1| hypothetical protein AURANDRAFT_29093 [Aureococcus anophagefferens]
Length = 698
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 292/584 (50%), Positives = 390/584 (66%), Gaps = 43/584 (7%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++ VLHAGGKFGG+ SGY VSGGLHGVGLSVVNALS L+V V RDG +SRG P
Sbjct: 126 VLCVLHAGGKFGGAESGYRVSGGLHGVGLSVVNALSHQLDVEVTRDGSVASMAFSRGTPT 185
Query: 62 TTLTCHVLPVDSKD--RQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+T VD+ GTR+ F PD +F + FD++ +A R+ ELAFLN + ++L
Sbjct: 186 GDMT----RVDAAPGAATGTRVVFSPDGDIFEKTV-FDYDVLAARMDELAFLNAGVELSL 240
Query: 120 ----------RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVG---------- 159
+K D P + + GG+ EY +L ++K PLH +G
Sbjct: 241 TDFREPKKKKKKGDGGPRVDVFRH---DGGISEYADFLTSEKTPLHAALGPSVTKGKHTK 297
Query: 160 ----FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLG 215
R DG+ ++ AL+W SDAY++ + +AN IRT DGGTH++G+++ + R++N+
Sbjct: 298 EAFVARGTKDGVEVECALRWSSDAYAEVTVSFANGIRTADGGTHVDGLRSVVARSVNAAA 357
Query: 216 KKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYL 275
K+S + K + + GE+VREGLT ++ V VP PEFEGQTKTRLG+P VR+VVD V L
Sbjct: 358 KRSPSGKSDNAYVPGEYVREGLTAVLLVNVPEPEFEGQTKTRLGSPGVRQVVDAVVGAAL 417
Query: 276 TEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 335
+ E HP L +I+ K+L+A KAA AAK ARDLVR+KS+L ++ LPGKLADCS
Sbjct: 418 QQLFEWHPQALKAIVDKALAAQKAAGAAKAARDLVRRKSLLATTVLPGKLADCSLRDAAL 477
Query: 336 SEIFIVEGDSAGGSAKQGRDRRFQAILPLR----GKILNVERKDEAAMYKNEEIQNLIRA 391
SEIFIVEGDSA GSAKQGRDR QAILPLR GKILNVE+ +Y N E+Q LI A
Sbjct: 478 SEIFIVEGDSAAGSAKQGRDRESQAILPLRAVLRGKILNVEKCAPERIYLNAELQALISA 537
Query: 392 LGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPP 451
LGLGV+GE+F ++ LRYH+I+I+TDADVDGAHIR L+LTFFYRYQ++L ++G +++ PP
Sbjct: 538 LGLGVRGEEFNRDNLRYHRIVIMTDADVDGAHIRALILTFFYRYQRSLIEDGHVFIACPP 597
Query: 452 LYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRML 511
LYKV RG++ YC+ D +L+ ++ + +IQRFKGLGEMMP QLW TT++P R +
Sbjct: 598 LYKVSRGRKDTYCWSDDDLE---AALAGDGKATIQRFKGLGEMMPNQLWATTMDPTARKM 654
Query: 512 KQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
+Q+V++DAA+A+ V + LMG V RKE I AN V LD D+
Sbjct: 655 QQVVVDDAAKADKVITLLMGDSVAERKEYI--VANSVALDAEDL 696
>gi|15893304|ref|NP_346653.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
gi|337735215|ref|YP_004634662.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
gi|384456724|ref|YP_005669144.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|18273027|sp|P94604.2|GYRB_CLOAB RecName: Full=DNA gyrase subunit B
gi|15022823|gb|AAK77993.1|AE007513_6 DNA gyrase (topoisomerase II) B subunit [Clostridium acetobutylicum
ATCC 824]
gi|325507413|gb|ADZ19049.1| DNA gyrase subunit B [Clostridium acetobutylicum EA 2018]
gi|336292832|gb|AEI33966.1| DNA gyrase subunit B [Clostridium acetobutylicum DSM 1731]
Length = 637
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 281/556 (50%), Positives = 384/556 (69%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG + Y VSGGLHGVG SVVNALSE+ EV V +G + Q Y RGK
Sbjct: 95 VIMTILHAGGKFGGGA--YRVSGGLHGVGASVVNALSETCEVEVKTEGHIWKQTYHRGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT+I F PD ++F ++D++T++ R+RELAFLN + I L
Sbjct: 153 ASPFE----KIGDSDEHGTKIYFKPDPEIFEDT-EYDYDTLSQRLRELAFLNKGIKIELT 207
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVD-GITIDLALQWCS 177
E D NE F + GGL+ +V +LN +K+ + + + +D ++++ALQ+ +
Sbjct: 208 DERHDK-----NEIFHYEGGLKSFVSYLNRNKEVVFKEPIYVEGSIDSNYSVEIALQY-N 261
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y++ + +AN+I TI+GGTH+ G K +LTR +N KK +K+ D +LSGE +REGL
Sbjct: 262 DGYNENIFSFANNIHTIEGGTHLAGFKTALTRVINDYAKKFGYLKENDKNLSGEDIREGL 321
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++SV++ P+FEGQTKT+LGN EVR +VD + E ++ YLE +P + ++ K+L A
Sbjct: 322 TAVVSVKLTEPQFEGQTKTKLGNTEVRGIVDSIISERVSTYLEENPQIGKLVIDKALVAS 381
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++ R+KSVL S+SLPGKLADCSS EE EI+IVEGDSAGGSAKQGR+RR
Sbjct: 382 RAREAAKKAREITRRKSVLESTSLPGKLADCSSKDAEECEIYIVEGDSAGGSAKQGRNRR 441
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKI+NVE++ + +EEI+ + A G G+ G+DF LRYHKIII+TDA
Sbjct: 442 FQAILPLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGI-GKDFDVSKLRYHKIIIMTDA 500
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYRY L EG +++ PPLYKV + ++ Y Y D EL+ V
Sbjct: 501 DVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVTKTRKEYYAYSDKELEDVLQDV 560
Query: 478 PS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ IQR+KGLGEM P QLWETT+NPEQR L ++ IEDA A+ +F+ LMG +VD
Sbjct: 561 GGKDKNTDIQRYKGLGEMNPEQLWETTMNPEQRTLIKVNIEDAMAADEIFTILMGDKVDP 620
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA +VNLD
Sbjct: 621 RRKFIEENATKVVNLD 636
>gi|1790875|gb|AAB41130.1| DNA gyrase subunit B [Clostridium acetobutylicum ATCC 824]
Length = 637
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 281/556 (50%), Positives = 384/556 (69%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG + Y VSGGLHGVG SVVNALSE+ EV V +G + Q Y RGK
Sbjct: 95 VIMTILHAGGKFGGGA--YRVSGGLHGVGASVVNALSETCEVEVKTEGHIWKQTYHRGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT+I F PD ++F ++D++T++ R+RELAFLN + I L
Sbjct: 153 ASPFE----KIGDSDEHGTKIYFKPDPEIFEDT-EYDYDTLSQRLRELAFLNKGIKIELT 207
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVD-GITIDLALQWCS 177
E D NE F + GGL+ +V +LN +K+ + + + +D ++++ALQ+ +
Sbjct: 208 DERHDK-----NEIFHYEGGLKSFVSYLNRNKEVVFKEPIYVEGSIDSNYSVEIALQY-N 261
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y++ + +AN+I TI+GGTH+ G K +LTR +N KK +K+ D +LSGE +REGL
Sbjct: 262 DGYNENIFSFANNIHTIEGGTHLAGFKTALTRVINDYAKKFGYLKENDKNLSGEDIREGL 321
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++SV++ P+FEGQTKT+LGN EVR +VD + E ++ YLE +P + ++ K+L A
Sbjct: 322 TAVVSVKLTEPQFEGQTKTKLGNTEVRGIVDSIISERVSTYLEENPQIGKLVIDKALVAS 381
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++ R+KSVL S+SLPGKLADCSS EE EI+IVEGDSAGGSAKQGR+RR
Sbjct: 382 RAREAAKKAREITRRKSVLESTSLPGKLADCSSKDAEECEIYIVEGDSAGGSAKQGRNRR 441
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKI+NVE++ + +EEI+ + A G G+ G+DF LRYHKIII+TDA
Sbjct: 442 FQAILPLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGI-GKDFDVSKLRYHKIIIMTDA 500
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYRY L EG +++ PPLYKV + ++ Y Y D EL+ V
Sbjct: 501 DVDGAHIRTLILTFFYRYMTELISEGHVFIAQPPLYKVTKTRKEYYAYSDKELEDVLQDV 560
Query: 478 PS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ IQR+KGLGEM P QLWETT+NPEQR L ++ IEDA A+ +F+ LMG +VD
Sbjct: 561 GGKDKNTDIQRYKGLGEMNPEQLWETTMNPEQRTLIKVNIEDAMAADEIFTILMGDKVDP 620
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA +VNLD
Sbjct: 621 RRKFIEENATKVVNLD 636
>gi|147921290|ref|YP_684896.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
gi|110620292|emb|CAJ35570.1| type II DNA topoisomerase II (gyrase), subunit B [Methanocella
arvoryzae MRE50]
Length = 635
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 274/553 (49%), Positives = 386/553 (69%), Gaps = 17/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V R+G + Q+Y +GKP
Sbjct: 97 IVMTILHAGGKFDNRT--YKVSGGLHGVGVSVVNALSEYLEVEVKRNGKVFFQRYEKGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V C V + D+ GT+ F PDK +F T ++F + +A R+RELA+LN + I L
Sbjct: 155 V----CEVKIIGETDQTGTKTTFKPDKSIFET-VEFQFDILANRLRELAYLNKGIRITL- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
SD + EY + GG+ +++++LN DK LH + F ++ D +++++Q+ +D
Sbjct: 209 ---SDLGAQKSAEYHYEGGINQFIEYLNQDKTVLHPKPIYFEREKDTTKVEISMQY-NDG 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+I T +GGTH+ G +A+LTRT+N +K+ +K D+ LSGE +REGLT
Sbjct: 265 YSEVILAFANNINTHEGGTHLSGFRAALTRTVNDYARKNNMLKG-DMVLSGEDIREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ NP+FEGQTKT+LGN +V+ +V+ V + L +YLE +P I+ K++ A +A
Sbjct: 324 IISVKLTNPQFEGQTKTKLGNSDVKGIVESLVGDGLNDYLEENPADARKIIEKTVQAFQA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L S+LPGKLADCS + E++IVEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAARKARELTRRKSALEGSTLPGKLADCSEKDASKCELYIVEGDSAGGSAKQGRNRLFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + ++ EI+ LI ALG GV GEDF + RYHKII++TDADV
Sbjct: 444 AILPLRGKILNVEKARLNKILESAEIRALITALGTGV-GEDFVLDKARYHKIILMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLY++++GK+ +Y Y D EL + +
Sbjct: 503 DGAHIRTLLLTFFYRYMQQIVEAGFVYIAQPPLYRIKKGKEEKYVYSDRELNEALEAMGR 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ SIQR+KGLGEM P QLW TT++P R + Q+ +ED EA+ F+ LMG +V+ R+E
Sbjct: 563 TNV-SIQRYKGLGEMNPEQLWSTTMDPATRTMYQVKLEDVIEADRTFTLLMGDKVEPRRE 621
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 622 FIVKNAKFVKNLD 634
>gi|217076995|ref|YP_002334711.1| DNA gyrase B subunit [Thermosipho africanus TCF52B]
gi|419759567|ref|ZP_14285861.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
gi|217036848|gb|ACJ75370.1| DNA gyrase, B subunit [Thermosipho africanus TCF52B]
gi|407515387|gb|EKF50145.1| DNA gyrase subunit B [Thermosipho africanus H17ap60334]
Length = 627
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 281/542 (51%), Positives = 378/542 (69%), Gaps = 17/542 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG SVVNALS+ LEV V RDG Y+Q+Y RG P
Sbjct: 90 VVMTTLHAGGKF--SKDSYKVSGGLHGVGASVVNALSQWLEVEVHRDGKVYYQRYERGTP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
TC V + +++GT +RF PD +F+T FD +TI R+RELAFLNP +TI +
Sbjct: 148 ----TCEVKIIGETEKRGTTVRFKPDPLIFSTT-DFDTDTILMRLRELAFLNPNITIYFK 202
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E ++ E+ + + GG++E+V L+ K LH+ V + + I ++++ Q+ +D+
Sbjct: 203 DERNNTERT----FHYTGGIKEFVSHLSKGSKSLHEPVYISGEYEKIKVEVSFQY-TDSD 257
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + + N+IRT+DGGTH+ G K++ TR +N LG+K+ +K KD SL G+ VREG+ +
Sbjct: 258 FEKIYSFVNNIRTVDGGTHVTGFKSAFTRVVNELGRKTGQLK-KD-SLRGDDVREGMVAV 315
Query: 241 ISVRVPN-PEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
ISV + + PEFEGQTK++LGN EV++ V + V+E L E+ E + + L I+ K+L A KA
Sbjct: 316 ISVLMSSTPEFEGQTKSKLGNEEVQEAVAKVVREKLLEFFETNENTLKIIIQKALEAKKA 375
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK AR++V++KSV SSSLPGKLADC + EESE+FIVEGDSAGGSAKQ RDR FQ
Sbjct: 376 REAAKHAREMVKRKSVFGSSSLPGKLADCITKKLEESELFIVEGDSAGGSAKQARDRNFQ 435
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + KNE+++++I ALG+G+ G+DF + LRY KIII+TDADV
Sbjct: 436 AILPLRGKILNVEKSSWLKLLKNEQVRDIITALGVGI-GDDFDIKKLRYGKIIIMTDADV 494
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY K L +EG IY+ PPLYK+ GK Y Y D EL+ K +
Sbjct: 495 DGAHIRTLLLTLFYRYMKELIEEGRIYIAQPPLYKLTVGKDHYYFYSDEELEDFKKTLED 554
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
Y IQR+KGLGEM P QLWETT++P R L ++ IEDA A+ +F LMG+ ++RKE
Sbjct: 555 KK-YEIQRYKGLGEMNPEQLWETTMDPNTRKLLKVSIEDAETADELFEMLMGSDTESRKE 613
Query: 540 LI 541
I
Sbjct: 614 FI 615
>gi|365173766|ref|ZP_09361472.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
gi|363616789|gb|EHL68216.1| DNA gyrase, B subunit [Synergistes sp. 3_1_syn1]
Length = 647
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 272/555 (49%), Positives = 387/555 (69%), Gaps = 18/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LE+T+WR+G EYHQ+Y RG P
Sbjct: 106 VVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVVNALSVWLELTIWRNGKEYHQRYERGIP 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T L V + +GTR++F PD+++F+T +F + + R+RELAFLN +TI
Sbjct: 164 MTGLEA----VGDTELRGTRVQFMPDEEIFSTT-EFQADILKQRLRELAFLNSHITINF- 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD---VVGFRKDVDGITIDLALQWCS 177
ED PEK + Y + GG+ +V++LN K+ L ++ KD +D+A+Q+ +
Sbjct: 218 -EDLRPEKPEKKSYNYPGGISSFVEYLNKGKEVLFKGPMIISGEKD--QTQVDVAIQY-N 273
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y + + G+ N I TI+GGTH+ G ++++TR +N +K K +K+KD +LSG+ ++EGL
Sbjct: 274 DTYLERLYGFVNLINTIEGGTHVAGFRSAMTRAINDEARKLKILKEKDNNLSGDDLKEGL 333
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN +V+ +VD V E L L+ P++L I+ +L A
Sbjct: 334 TAVISVKVMEPQFEGQTKTKLGNNDVKGIVDSIVYEGLKNALDERPEILKPIVESALRAR 393
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+A++LVR+KS++ +LPGKL+DCS+ P + EI+IVEGDSAGGSAKQGR+R
Sbjct: 394 QAREAAKKAKELVRRKSIMSGLTLPGKLSDCSNRNPADCEIYIVEGDSAGGSAKQGRNRE 453
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILNVE+ + +E I+N+I ALG GV G+DF E LRYHKI I+ DA
Sbjct: 454 FQAILPLRGKILNVEKARLEKILSSETIRNIILALGCGV-GDDFNDEKLRYHKIFIMADA 512
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLT F+RY + ++G +YV PPL++V+ GK V YC+ + E+K+ ++
Sbjct: 513 DVDGAHIRTLLLTLFFRYMPQIIEKGYLYVAQPPLFRVQCGKDVTYCFSEKEMKEAQNKA 572
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ +QR+KGLGEM QLWETT+NPE R++ ++ ++DA EA+ +F LMG V+ R
Sbjct: 573 NGKKV-DVQRYKGLGEMNAEQLWETTMNPENRIINRVEVQDAVEADELFGILMGDVVEPR 631
Query: 538 KELIQNAANLV-NLD 551
++ I+ V NLD
Sbjct: 632 RKFIEQFGKEVKNLD 646
>gi|403236812|ref|ZP_10915398.1| DNA gyrase subunit B [Bacillus sp. 10403023]
Length = 640
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 379/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKF G GY VSGGLHGVG SVVNALS SLEV V RDG ++ + RG
Sbjct: 98 VIMTILHAGGKFDGG--GYKVSGGLHGVGASVVNALSTSLEVYVHRDGKIHYIAFERGHV 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L V D GT F PD ++FT +++D +T+A R+RELAFL + I +
Sbjct: 156 VTELKV----VGETDHTGTTTHFKPDGEIFTETLEYDFDTLATRLRELAFLTRGVKITI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
+ E+N+ EY + GG++ YV+ LN K+ +H+ F + +GI I++ALQ+ +D+
Sbjct: 211 --EDKREENKRREYHYEGGIKSYVEHLNRTKEVIHEEPVFVEGEREGIAIEIALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N +++ KD D +LSG+ VREGLT
Sbjct: 268 YTSNIYSFANNIHTYEGGTHESGFKTALTRIINDYARRNNIFKDNDANLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P+FEGQTKT+LGN E R V + E +L +P V I+ K A +A
Sbjct: 328 IISVKHPDPQFEGQTKTKLGNSEARTVTESVFSEKFEAFLLENPTVARKIVDKGTMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDRILSNNEVRSMITALGTGI-GEDFDISKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + + + G +Y+ PPLYK+++GK+++Y Y+D EL+K + PS
Sbjct: 507 DGAHIRTLLLTFFYRFMRQIIESGFVYIAQPPLYKIQQGKRIEYAYNDRELEKYLAELPS 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N IQR+KGLGEM P QLWETT++P R + Q+ ++DA +A+ F LMG +V+ R+
Sbjct: 567 NPKPGIQRYKGLGEMNPEQLWETTMDPSNRTMLQVTLQDAIDADETFEMLMGDKVEPRRN 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAQYVKNLD 639
>gi|402814456|ref|ZP_10864050.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
gi|402508303|gb|EJW18824.1| DNA gyrase subunit B [Paenibacillus alvei DSM 29]
Length = 636
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 283/553 (51%), Positives = 378/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS SL VTV RDG + Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTSLVVTVKRDGHIHQQEYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT IRF PD +VFT ++D++T+ RIRELAFLN + + L
Sbjct: 153 QADLEI----IGDTEETGTTIRFQPDPEVFTETTEYDYDTLLSRIRELAFLNKGIQMVL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
+D Q + + GG++E+V++LN +++ +H+ + D IT ++ALQ+ +D+
Sbjct: 208 ---TDERTGQSETFKYDGGIKEFVEYLNRNREKMHEQPIYVEGSKDYITCEVALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH G K++LTR +N +K +KD + +LSG+ VREGLT
Sbjct: 264 YTENIYSFANNIHTHEGGTHESGFKSALTRIINDYARKMNLMKDNNSNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P P+FEGQTKT+LGN EVR +V+ E E+L +P V I+ K + A +A
Sbjct: 324 IISVKIPEPQFEGQTKTKLGNSEVRSIVESVFSEKFMEFLNENPMVSKKIVEKGMQASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+L R+KS L SSLPGKLADCSS E+FIVEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAARRARELTRRKSALEVSSLPGKLADCSSKDAAHCELFIVEGDSAGGSAKQGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + N EI+ +I ALG G+ GEDF E RYHKI+I+TDADV
Sbjct: 444 AILPLKGKILNVEKSRLDKILSNAEIRAIITALGTGI-GEDFDLEKARYHKIVIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ER K V+Y D + ++ + F
Sbjct: 503 DGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLYKIERNKIVRYADSDKQKDEIIAEFGE 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM QLWETT++PE R + Q+ +DA A+ VF +LMG V+ R++
Sbjct: 563 GAKVNVQRYKGLGEMNAEQLWETTMDPESRKMLQVSFDDAKMADDVFDTLMGDNVEPRRD 622
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 623 FIQRHAKFVKNLD 635
>gi|255994573|ref|ZP_05427708.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
gi|255993286|gb|EEU03375.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989]
Length = 651
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 279/554 (50%), Positives = 384/554 (69%), Gaps = 13/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I ++LHAGGKF + GY VSGGLHGVG SVVNALS +EV + R+G Y Q+YSRGK
Sbjct: 107 VIHSILHAGGKFD-ENGGYKVSGGLHGVGASVVNALSSRMEVKIKRNGNLYKQEYSRGKT 165
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T L + + G+ F PD Q+F I+FD++T+ R RE+AFLN L I L
Sbjct: 166 MTKLEI----IGTSTETGSITEFMPDDQIFDD-IEFDYDTLNYRFREMAFLNKGLKIQL- 219
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
ED + + N Y + GG++E++++ N +K+ LH D++ F K +D +++A+Q+ +D
Sbjct: 220 -EDKRKGREKTNTYCYEGGIKEFIKYQNKNKEKLHEDIIFFDKKLDNSQVEVAIQY-TDR 277
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+T+L YAN+I T +GG H+ G K++LTR +N KK+K + + D SL GE VREGLT
Sbjct: 278 YSETLLSYANNINTTEGGYHLSGFKSALTRVINDYAKKAKLIGENDNSLLGEDVREGLTA 337
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ NP+FEGQTKT+LGN +R VV+ +V E + +L HP I+ K + + +
Sbjct: 338 IISVKLTNPQFEGQTKTKLGNSFIRGVVETAVNENVYAFLIEHPKQAKIIIEKCIKSARV 397
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+ARDL R+K+ L S +LPGKL+DCS P+ SEIF+VEGDSAGGSA+QGRDR Q
Sbjct: 398 REAAKKARDLTRRKTALDSLALPGKLSDCSEKDPKLSEIFLVEGDSAGGSARQGRDRNRQ 457
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPLRGKILNVE+ + +EEI+N+I A G G+ G+DF+ + LRYHKIII+TDADV
Sbjct: 458 AVLPLRGKILNVEKARLDKILSSEEIKNMITAFGCGI-GDDFELDKLRYHKIIIMTDADV 516
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY L + G +Y PPLYKV++GK+ Y Y + E KK+ +
Sbjct: 517 DGAHIRTLLLTFFYRYMMPLVEAGHVYAAQPPLYKVKKGKKEYYTYSENEQKKLMKNLAE 576
Query: 480 NALYS-IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
S IQR+KGLGEM QLWETT++ ++R L Q+ +EDA+ A+ +F++LMG +V RK
Sbjct: 577 QGGKSDIQRYKGLGEMDYNQLWETTMDYDKRTLIQITVEDASAADDIFTTLMGDKVPPRK 636
Query: 539 ELI-QNAANLVNLD 551
+ I +NA + NLD
Sbjct: 637 KFIEENARYVKNLD 650
>gi|385267030|ref|ZP_10045117.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
gi|385151526|gb|EIF15463.1| DNA topoisomerase IV subunit B [Bacillus sp. 5B6]
Length = 640
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 379/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F ++D++ ++ R+RELAFL + I +
Sbjct: 155 VADLEV----IGDTDKTGTITHFVPDPEIFKETTEYDYDLLSNRVRELAFLTKGVNITI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 210 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 268 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 507 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 FIEANARYVKNLD 639
>gi|154684524|ref|YP_001419685.1| DNA gyrase subunit B [Bacillus amyloliquefaciens FZB42]
gi|154350375|gb|ABS72454.1| GyrB [Bacillus amyloliquefaciens FZB42]
Length = 638
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 379/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F I +D++ ++ R+RELAFL + I +
Sbjct: 153 VADLEV----IGDTDKTGTITHFVPDPEIFKETIVYDYDLLSNRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 505 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|394994154|ref|ZP_10386883.1| DNA gyrase subunit B [Bacillus sp. 916]
gi|393805003|gb|EJD66393.1| DNA gyrase subunit B [Bacillus sp. 916]
Length = 638
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 379/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F ++D++ ++ R+RELAFL + I +
Sbjct: 153 VADLEV----IGDTDKTGTITHFVPDPEIFKETTEYDYDLLSNRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 505 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|288554611|ref|YP_003426546.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
gi|288545771|gb|ADC49654.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4]
Length = 646
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 282/553 (50%), Positives = 376/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+ Y+Q+Y RG P
Sbjct: 104 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVEVHRENQVYYQEYHRGVP 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + +++GT IRF PD ++FT +++++ +A R+RELAFLN LTI +
Sbjct: 162 AADLAV----IGETEKRGTIIRFKPDPEIFTETTEYEYDILATRLRELAFLNKGLTITIT 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E+N+ + YF+ GG+ +V+ LN K+ LHD + + DG+ +++A+Q+ +D
Sbjct: 218 DKR---EENKSSTYFYEGGIASFVEHLNRSKEVLHDEPIHIEAEKDGLNVEVAVQY-NDG 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + +AN+I T +GGTH G K LTR +N +K K+ D +L+GE VREGLT
Sbjct: 274 YVSNIYSFANNISTHEGGTHESGFKTGLTRVINDYARKHNLFKENDPNLTGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P+P+FEGQTKT+LGN E R V D E + ++ HP V I+ K L A +A
Sbjct: 334 IISVKIPDPQFEGQTKTKLGNSEARTVTDSLFSEAFSRFMIEHPQVGKKIVEKGLMASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L SSLPGKLADCSS SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 REAAKKARELTRRKSALEVSSLPGKLADCSSKDATISEIYIVEGDSAGGSAKQGRDRHFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF E RYHKIII+TDADV
Sbjct: 454 AILPLRGKIINVEKARLDKILANNEIRAIITALGTGI-GDDFDIEKARYHKIIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFFYRY + L ++G IY+ PPLYKV +G+ +QY Y+D EL ++ S +
Sbjct: 513 DGAHIRTLILTFFYRYMRPLIEKGYIYIAQPPLYKVTQGRDLQYAYNDKELDQIMSQYTE 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT++PE R + Q+ +EDA +A+ +F LMG RV+ R++
Sbjct: 573 RNKVGIQRYKGLGEMNPTQLWETTMDPEYRTVLQVTLEDAMKADEIFEILMGDRVEPRRD 632
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 633 FIHENAQYVKNLD 645
>gi|70725006|ref|YP_251920.1| DNA gyrase subunit B [Staphylococcus haemolyticus JCSC1435]
gi|68445730|dbj|BAE03314.1| DNA gyrase (topoisomerase II) subunit B [Staphylococcus
haemolyticus JCSC1435]
Length = 644
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 376/552 (68%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V S D+ GT IRF D ++FT +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EVGSTDKTGTVIRFKADSEIFTETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ LN +K+P+H+ + + D + I++A+Q+ S
Sbjct: 215 DEREDVEQRE-DTYHYEGGIKSYVELLNENKEPIHEEPIYIHQTKDDVEIEIAMQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRILNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ E+ +L HP+V ++ K + A +A
Sbjct: 333 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDRLFAEHFERFLYEHPNVARIVVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKKPEESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLAQGKQKYYVFNDRELDKLKSELSP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|402300224|ref|ZP_10819751.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
gi|401724614|gb|EJS97959.1| DNA gyrase subunit B [Bacillus alcalophilus ATCC 27647]
Length = 641
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/555 (51%), Positives = 373/555 (67%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV + RDG YHQKY +G P
Sbjct: 99 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTMLEVEIERDGNLYHQKYHQGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
L + + GT+ F PD ++F I +D++T+A R+RELAFLN LTI +
Sbjct: 157 AADLAI----IGKSENSGTKTHFKPDPEIFQETIVYDYDTLALRLRELAFLNKGLTITIT 212
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++ED K Y++ GG+ +V+ LN K+ LHD + + DG+ +++A+Q+ +
Sbjct: 213 DKREDGKSAK-----YYYEGGIASFVKHLNRTKEVLHDEPIHIEGEKDGLNVEVAVQY-N 266
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y + +AN+I T +GGTH G K +LTR +N +K+ VK+ D +L+G+ VREGL
Sbjct: 267 DGYVGNLYSFANNISTHEGGTHESGFKTALTRVINDYARKNSLVKENDPNLTGDDVREGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV++P+P+FEGQTKT+LGN E R + D E+ + +L +P V I+ K L A
Sbjct: 327 TAIISVKIPDPQFEGQTKTKLGNSEARTITDSLFSEHFSRFLIENPQVARKIVEKGLMAS 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR+L R+KS L S+LPGKLADC+S SEI+IVEGDSAGGSAKQGRDR
Sbjct: 387 RAREAAKKARELTRRKSALEVSALPGKLADCASKDASISEIYIVEGDSAGGSAKQGRDRH 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKI+NVE+ + N EI+ +I A G GV G DF E RYHKIII+TDA
Sbjct: 447 FQAILPLRGKIINVEKARLDKILANNEIRAMITAFGTGVGG-DFDIEKARYHKIIIMTDA 505
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY K L + G +Y+ PPLYKV GK++QY Y EL + S+
Sbjct: 506 DVDGAHIRTLLLTFFYRYMKPLIEYGYVYIAQPPLYKVTHGKEIQYAYVQKELDPILKSY 565
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P A IQR+KGLGEM P QLWETT++PE R L Q+ +EDA +A+ +F LMG RV+ R
Sbjct: 566 PEGAKIGIQRYKGLGEMNPTQLWETTMDPEHRTLLQVTLEDAIKADEIFEILMGDRVEPR 625
Query: 538 KELIQ-NAANLVNLD 551
++ IQ NA + NLD
Sbjct: 626 RDFIQENAQYVENLD 640
>gi|383320651|ref|YP_005381492.1| DNA gyrase subunit B [Methanocella conradii HZ254]
gi|379322021|gb|AFD00974.1| DNA gyrase subunit B [Methanocella conradii HZ254]
Length = 635
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 382/553 (69%), Gaps = 17/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE ++V V R+G Y Q Y RGKP
Sbjct: 97 IVMTMLHAGGKFDNRT--YKVSGGLHGVGVSVVNALSEWMKVEVRRNGRLYVQDYVRGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T V + + GTR+ F PD +F T +F ++ +A R+RELAFLN + I
Sbjct: 155 ----TDEVHEIGTAIGTGTRVTFKPDPTIFETT-EFKYDILANRLRELAFLNKGIKITF- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+D + + GG+ ++V +LN K PLHD V+ F K D +++A+Q+ +D
Sbjct: 209 ---TDARSGVSEVFHYEGGIVQFVHYLNEGKTPLHDKVIYFEKQKDTTNVEIAMQY-NDG 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L +AN+I T +GGTH+ G +++LTR+ N KK+ +K D+ LSG+ VREGLT
Sbjct: 265 YNEIVLAFANNINTTEGGTHLSGFRSALTRSFNDYAKKNNLLKG-DMVLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ NP+FEGQTKT+LGN EV+ +V+ V E L +YLE +P I+ K++ A A
Sbjct: 324 IISVKLTNPQFEGQTKTKLGNSEVQGIVNSLVGEGLDDYLEENPADARKIIEKAIQAFHA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L SS+LPGKLADCS PE+ E+++VEGDSAGGSAKQGR+R +Q
Sbjct: 384 REAARKARELTRRKSALESSTLPGKLADCSEKDPEKCELYLVEGDSAGGSAKQGRNRMYQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + ++EEI+ LI ALG V G++F RYHKII++TDADV
Sbjct: 444 AILPLRGKILNVEKARLSKALQSEEIKALITALGTSV-GDEFDISKARYHKIILMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L + G +Y+ PPL+K+++GK+ +Y Y + EL
Sbjct: 503 DGAHIRTLLLTFFYRYMKPLVEAGYVYIAQPPLFKIKKGKEERYVYSEKELNAALDEM-G 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ Y+IQR+KGLGEM P QLW TT++PE R + ++ +EDAAEA+ +FS LMG +V+ RK
Sbjct: 562 RSNYTIQRYKGLGEMNPEQLWSTTMDPETRTVLKVTLEDAAEADHIFSVLMGDKVEPRKA 621
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 622 FIEKNAKLVRNLD 634
>gi|373456034|ref|ZP_09547845.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
gi|371934284|gb|EHO62082.1| DNA gyrase, B subunit [Dialister succinatiphilus YIT 11850]
Length = 649
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/554 (51%), Positives = 386/554 (69%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY +SGGLHGVG+SVVNALSE ++V V R+G + K SRG
Sbjct: 107 VVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSEWMKVVVRREGHFHEMKLSRGD- 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T H+ D GT + F PD Q+F I FD+ T+ R+RELAFLN LTI L
Sbjct: 164 ---VTEHMRTYGETDETGTSVTFKPDIQIFKEGIDFDYETLKIRMRELAFLNKGLTITL- 219
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSD 178
++ D +Q + + +AGG+ E+VQ+LN + K L D V+ F + D + +D+A+Q+ +
Sbjct: 220 TDNRDGATHQ-DVFHYAGGITEFVQFLN-EGKDLVDPAVIAFEGEKDKVIVDIAMQYQT- 276
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YS+ M + N I T++GG H+ G + +LTR LN +KS +K + +LSG+ VREGLT
Sbjct: 277 GYSENMYTFVNDINTVEGGMHLAGFRTALTRVLNDYARKSGILKQNEDNLSGDDVREGLT 336
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
C+ISV+VPNP+FEGQTKT+LGN EV+ +VD V E L YLE HP +I+ K ++A +
Sbjct: 337 CVISVKVPNPQFEGQTKTKLGNLEVKSIVDNIVSEGLKTYLEEHPQEARAIVEKGITASR 396
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA+RAR+L R+K+ L SSLPGKLADC+ P+ +EI+IVEGDSAGGSAK GRDRR+
Sbjct: 397 AREAARRARELTRRKNALEVSSLPGKLADCTEKDPKFTEIYIVEGDSAGGSAKSGRDRRY 456
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + ++ I+ +I A G GV GEDF LRY+KIII+TDAD
Sbjct: 457 QAILPLRGKILNVEKARLDRVLNSDAIRTMITAFGTGV-GEDFDITKLRYYKIIIMTDAD 515
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY K L EG +Y+ PPLY++ +G+Q Y YDD E K+
Sbjct: 516 VDGAHIRTLLLTFFYRYMKPLITEGHVYIAQPPLYQIRKGRQKYYTYDDDEQNKMLDEIG 575
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLW+TT+NPEQR++ ++ + DA EA+ +F+ LMG +V+ R+
Sbjct: 576 RDGC-TIQRYKGLGEMDPEQLWDTTMNPEQRVMLKVELTDAIEADRLFTILMGDKVEPRR 634
Query: 539 ELI-QNAANLVNLD 551
I ++A + NLD
Sbjct: 635 RFIEEHAKEVTNLD 648
>gi|239825589|ref|YP_002948213.1| DNA gyrase subunit B [Geobacillus sp. WCH70]
gi|239805882|gb|ACS22947.1| DNA gyrase, B subunit [Geobacillus sp. WCH70]
Length = 640
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/556 (52%), Positives = 385/556 (69%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEELEVYVHRDGKIHYQKYQRGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + DR GT +RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 156 CTDLEV----IGETDRTGTTVRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
ED E N+ NEY + GG++ YV+ LN ++ LH+ ++G R DGI +++ALQ+
Sbjct: 211 -EDKRVE-NRKNEYHYEGGIKSYVKHLNRTREVLHEEPIYIIGER---DGIYVEIALQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+YS + + N+I T +GGTH G K +LTR +N +K + +KD D +L+GE VREG
Sbjct: 265 NDSYSSNIYSFVNNIHTHEGGTHESGFKTALTRIINDYARKHQILKDNDPNLTGEDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I+ K + A
Sbjct: 325 LTAIVSIKHPSPQFEGQTKTKLGNSDARAVTDAIFSEQFETFLLENPTIARKIVEKGMMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 385 ARARLAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKIII+TD
Sbjct: 445 HFQAILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDITKARYHKIIIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + G +Y+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRYMREFIERGYVYIAQPPLYKIEQGKQVKYAYNDRQLEKILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P N +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA EA+ F LMG +V+
Sbjct: 564 LPENPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIEADETFEILMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENARYVKNLD 639
>gi|15612569|ref|NP_240872.1| DNA gyrase subunit B [Bacillus halodurans C-125]
gi|4033396|sp|O50627.1|GYRB_BACHD RecName: Full=DNA gyrase subunit B
gi|2760177|dbj|BAA24187.1| B subunit of DNA gyrase [Bacillus sp.]
gi|5672652|dbj|BAA82690.1| gyrB [Bacillus halodurans]
gi|10172618|dbj|BAB03725.1| DNA gyrase subunit B [Bacillus halodurans C-125]
Length = 637
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 282/553 (50%), Positives = 376/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QK+ RG P
Sbjct: 95 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTMLEVEVHREGKVHYQKFHRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + DR GT+I F PD +FT F+++T+A R+RELAFLN L I +
Sbjct: 153 AADLEV----IGTTDRTGTKIHFKPDGDIFTETTVFEYDTLASRLRELAFLNKGLRIKIT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E+ + +E+ + GG+ +V+ LN ++ LH+ + + G+ +++A+Q+ +D
Sbjct: 209 DMR---EEEKSDEFHYEGGIASFVEHLNRTRETLHETPIHIEGEKQGVYVEIAVQY-NDG 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + +AN+I T +GGTH G K LTR +N +K K+ D +L+GE VREGLT
Sbjct: 265 FTSNIYSFANNINTHEGGTHESGFKTGLTRVINDYARKHNLFKESDPNLTGEDVREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P+P+FEGQTKT+LGN E R + D E+ + +L HP V ++ K L A +A
Sbjct: 325 IISVKIPDPQFEGQTKTKLGNSEARTITDSLFTEHFSRFLIEHPQVARKLVDKGLMASRA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L SSLPGKLADCSS SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 385 REAAKKARELTRRKSALEVSSLPGKLADCSSRDASISEIYIVEGDSAGGSAKQGRDRHFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I ALG G+ G+DF E RYHKIII+TDADV
Sbjct: 445 AILPLRGKILNVEKARLDKILANNEIRAIITALGTGI-GDDFDIEKARYHKIIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFFYRY + L + G +Y+ PPLYKV++GK +QY Y DAEL+++ S P
Sbjct: 504 DGAHIRTLILTFFYRYMRPLIEHGYVYIAQPPLYKVQQGKDIQYAYGDAELQEILSQLPD 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A IQR+KGLGEM P QLWETT++P QR + Q+ +EDA +A+ +F LMG RV+ R++
Sbjct: 564 KAKPGIQRYKGLGEMNPSQLWETTMDPGQRTVLQVTLEDAMKADEIFEILMGDRVEPRRD 623
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 624 FIQENARYVKNLD 636
>gi|435853738|ref|YP_007315057.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433670149|gb|AGB40964.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 636
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/554 (49%), Positives = 382/554 (68%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF GS GY VSGGLHGVG+SVVNALSE L++ ++R+G YHQKY RG P
Sbjct: 94 LVLTTLHAGGKFDGS--GYKVSGGLHGVGVSVVNALSEWLKIKIYRNGAVYHQKYERGYP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + GT I F PD ++F T ++F +T+ R++E AFLN L + L+
Sbjct: 152 VTEFEKQ----GTTSKTGTEIAFKPDAEIFDT-LEFKFDTLKNRLQESAFLNKNLNLILK 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D EK++ +Y + GGLE +++ LN K PL D+V ++VD +++A Q+ +
Sbjct: 207 --DRRKEKDKEVKYCYDGGLEAFIKHLNKSKTPLVDDIVYVEREVDDTYVEIAFQY-NKG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T DGG H+ G K ++T+ LN ++ + D L+G +REGLT
Sbjct: 264 YNERIYSFANNINTHDGGYHLTGFKTAITKALNKYAEEKNVLNKTDPKLTGRDLREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN E+R V V +YL YLE +P + ++++K+L A++A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNSEIRTTVQHVVSDYLPSYLERNPKLAKAVINKALEAVRA 383
Query: 300 ALAAKRARDLVRQ-KSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A+K+AR+L R+ K L S+SLPGKLADCSS TPEE E+++VEGDSAGGSAKQGR+R F
Sbjct: 384 RKASKKARELARKRKGPLSSNSLPGKLADCSSRTPEECELYLVEGDSAGGSAKQGRNRNF 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QA+LPL+GKI+NVER + KN+EI +++ ALG G+ GE+F + LRYHKIII+TDAD
Sbjct: 444 QAVLPLKGKIMNVERSRLNKILKNKEIASIVTALGAGI-GEEFNLDKLRYHKIIIMTDAD 502
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHI TLLLT FYRY L + IY+ PPLY+V G+Q +Y Y D ELK+
Sbjct: 503 VDGAHICTLLLTLFYRYMPQLIENSHIYIAQPPLYQVTYGRQKKYLYTDQELKEYLKDKN 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N + SIQR+KGLGEM P QLW TT++PE R L+++ ++D A+ VF SLMG++ R+
Sbjct: 563 RNRI-SIQRYKGLGEMNPGQLWTTTMDPEHRKLQKVEVDDEIIADDVFHSLMGSKASLRR 621
Query: 539 ELIQNAANLV-NLD 551
E I N A+L N+D
Sbjct: 622 EFIMNNADLASNID 635
>gi|406829974|gb|AFS63977.1| DNA gyrase subunit B [Cloacibacillus sp. CL-84]
Length = 647
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/553 (48%), Positives = 386/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+SVVNALS LE+T+WRDG E+HQ+Y RG P
Sbjct: 106 VVLTVLHAGGKF--DKSAYQVSGGLHGVGVSVVNALSVWLELTIWRDGKEHHQRYERGIP 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T L + +GTR++F PD ++F+T +F + + R+RELAFLN +TI
Sbjct: 164 MTQLEV----TGDTELRGTRVQFMPDDEIFSTT-EFQADILKQRLRELAFLNSHITINF- 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
ED EK + Y + GG+ +V++LN K+ L + V + D +++A+Q+ +D
Sbjct: 218 -EDQRSEKPEKKSYHYPGGISAFVEYLNKGKEVLFKEPVVINGEKDKTQLEVAIQY-NDT 275
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + G+ N I TI+GGTH+ G ++++TR +N +K K +K+KD +LSG+ ++EGLT
Sbjct: 276 YIERLFGFVNLINTIEGGTHVAGFRSAMTRAINDEARKLKILKEKDANLSGDDLKEGLTA 335
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN +V+ +VD V E L L+ P++L I+ +L A +A
Sbjct: 336 VISVKVMEPQFEGQTKTKLGNNDVKGIVDSIVYEGLKNALDERPEILKPIVESALRARQA 395
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A++LVR+KSV+ +LPGKL+DCS+ P + EI+IVEGDSAGGSAKQGR+R FQ
Sbjct: 396 REAAKKAKELVRRKSVMSGLTLPGKLSDCSNRNPADCEIYIVEGDSAGGSAKQGRNREFQ 455
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + +E I+N+I ALG GV G+DF ++ LRYHKI I+ DADV
Sbjct: 456 AILPLRGKILNVEKARLEKILSSETIRNIILALGCGV-GDDFNEDKLRYHKIFIMADADV 514
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT F+RY + ++G +YV PPL++V+ GK++ YC+ + E+K+ ++
Sbjct: 515 DGAHIRTLLLTLFFRYMPQIIEKGYLYVAQPPLFRVQCGKEITYCFSEKEMKEAQNKANG 574
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT+NPE R++ ++ ++DA EA+ +F LMG V+ R++
Sbjct: 575 KKV-EVQRYKGLGEMNAEQLWETTMNPEHRIINRVEVQDAVEADELFGILMGDVVEPRRK 633
Query: 540 LIQNAANLV-NLD 551
I+ V NLD
Sbjct: 634 FIEQYGKEVKNLD 646
>gi|150020566|ref|YP_001305920.1| DNA gyrase subunit B [Thermosipho melanesiensis BI429]
gi|149793087|gb|ABR30535.1| DNA gyrase, B subunit [Thermosipho melanesiensis BI429]
Length = 627
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/542 (52%), Positives = 378/542 (69%), Gaps = 17/542 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG SVVNALSE LEV V RDG Y+QKY RG P
Sbjct: 90 VVMTTLHAGGKF--SKDSYKVSGGLHGVGASVVNALSEWLEVEVHRDGKIYYQKYQRGTP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T V + D +GT +RF PD ++F+T ++FD +TI R+RELAFLNP +T+ +
Sbjct: 148 LT----EVRIIGETDYRGTIVRFKPDTEIFST-VEFDSDTILIRLRELAFLNPNITVVFK 202
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E + EK + F GGL+E+V L+ + LH+ + + + I +D+ Q+ + +
Sbjct: 203 DERENIEKT----FHFTGGLKEFVVHLSKGTRSLHEPILVSGEYNSIKVDVCFQYTASDF 258
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + + N+IRT+DGGTH+ G K + TR +N LGKK+ +K KD +L GE +REG+ I
Sbjct: 259 -EKIYSFVNNIRTVDGGTHVTGFKTAFTRVVNELGKKTGQLK-KD-TLRGEDIREGIVAI 315
Query: 241 ISVRVP-NPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+SV + PEFEGQTK++LGN EV++ V + V+E L EY E + + L I+ K+L A KA
Sbjct: 316 VSVLMSKTPEFEGQTKSKLGNEEVQEAVAKVVREKLLEYFESNENTLKIIIQKALEAKKA 375
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK AR+++++KSV SSSLPGKLADC + EESE+FIVEGDSAGGSAKQ RDR FQ
Sbjct: 376 REAAKHAREMIKRKSVFGSSSLPGKLADCITKKMEESELFIVEGDSAGGSAKQARDRNFQ 435
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + KNE+I+++I ALG G+ G+DF LRY KIII+TDADV
Sbjct: 436 AILPLRGKILNVEKSSWLKLLKNEQIRDIITALGTGI-GDDFDISKLRYGKIIIMTDADV 494
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY K L DEG IY+ PPLYKV K++ Y Y D EL++ K +
Sbjct: 495 DGAHIRTLLLTLFYRYMKELIDEGRIYIAQPPLYKVNVNKKIYYFYSDEELEEFKENLKD 554
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE+R L ++ IEDA EA+ +F LMG+ ++RKE
Sbjct: 555 KK-FEIQRYKGLGEMNPQQLWETTMDPEKRKLLKVEIEDAEEADELFEMLMGSDTESRKE 613
Query: 540 LI 541
I
Sbjct: 614 FI 615
>gi|421729501|ref|ZP_16168631.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451348605|ref|YP_007447236.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
gi|407076471|gb|EKE49454.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449852363|gb|AGF29355.1| DNA gyrase subunit B [Bacillus amyloliquefaciens IT-45]
Length = 638
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 153 VADLEV----IGETDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 505 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|83588881|ref|YP_428890.1| DNA gyrase subunit B [Moorella thermoacetica ATCC 39073]
gi|83571795|gb|ABC18347.1| DNA gyrase, B subunit [Moorella thermoacetica ATCC 39073]
Length = 634
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/555 (51%), Positives = 382/555 (68%), Gaps = 24/555 (4%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKFGG+ GY V+GGLHGVGLSVVNALSE LE+ V R+G YHQ+Y RG+ V+
Sbjct: 97 LTILHAGGKFGGN--GYKVAGGLHGVGLSVVNALSEWLEIKVKRNGKIYHQEYRRGQKVS 154
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT + F+PD ++F + F I R++EL+FLN + I R E
Sbjct: 155 ELKV----IGKTKGTGTSVTFYPDGEIFEDLV-FQDEIIGRRLQELSFLNRGVKIVFRDE 209
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLALQWCS 177
++ E Y+ GGL ++V+ LN +K KPL+ F + D + ++A+Q+ +
Sbjct: 210 RNESETT----YYHTGGLIDFVRHLNKNKTVLFNKPLY----FSGEKDDVQAEIAIQY-N 260
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y++ +L YAN+I T++GG+H G K +LTR +N ++ +KD + +LSGE +REGL
Sbjct: 261 DGYNELILSYANNIHTVEGGSHEIGFKTALTRVINDYARRFNLLKDAEANLSGEDIREGL 320
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EVR +VD V E L+ YLE +P + I+ K+L+A
Sbjct: 321 TAVISVKVLEPQFEGQTKTKLGNTEVRGIVDSLVAENLSAYLEENPTIGRRIVDKALNAF 380
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+L R+K+ L +SLPGKLADC+ P +E+F+VEGDSAGGSAKQGRDRR
Sbjct: 381 RAREAARKARELTRRKNALEITSLPGKLADCTHKDPAMAELFLVEGDSAGGSAKQGRDRR 440
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILNVE+ + NEEI+ +I ALG G+ G+DF RYHK I++ DA
Sbjct: 441 FQAILPLRGKILNVEKARLDKILNNEEIRTIITALGTGI-GDDFNINKARYHKTILMADA 499
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDG+HIRTLLLTFFYRY + L EG IY+ PPLYKV RGK +Y Y+DAEL+K
Sbjct: 500 DVDGSHIRTLLLTFFYRYMRPLITEGYIYIAQPPLYKVYRGKVERYLYNDAELEKFLKEH 559
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ +F+ LMG RV+ R
Sbjct: 560 EGER-WEIQRYKGLGEMNPEQLWETTMNPESRTLLQVNLEDAMEADAIFNILMGDRVEPR 618
Query: 538 KELIQNAANLV-NLD 551
+E IQ A+ V NLD
Sbjct: 619 REFIQQHAHEVRNLD 633
>gi|375360696|ref|YP_005128735.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371566690|emb|CCF03540.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 640
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 155 VADLEV----IGETDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 210 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 268 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 507 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 FIEANARYVKNLD 639
>gi|308171897|ref|YP_003918602.1| DNA gyrase subunit B [Bacillus amyloliquefaciens DSM 7]
gi|384162410|ref|YP_005543789.1| DNA gyrase subunit B [Bacillus amyloliquefaciens LL3]
gi|384166630|ref|YP_005548008.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
gi|307604761|emb|CBI41132.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens DSM 7]
gi|328909965|gb|AEB61561.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens LL3]
gi|341825909|gb|AEK87160.1| DNA gyrase subunit B [Bacillus amyloliquefaciens XH7]
Length = 640
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 155 VADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 210 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVIHEEPIYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 268 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 507 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 FIEANARYVKNLD 639
>gi|384157618|ref|YP_005539691.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
gi|328551706|gb|AEB22198.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208]
Length = 638
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 153 VADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVIHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 505 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|312126267|ref|YP_003991141.1| DNA gyrase subunit B [Caldicellulosiruptor hydrothermalis 108]
gi|311776286|gb|ADQ05772.1| DNA gyrase, B subunit [Caldicellulosiruptor hydrothermalis 108]
Length = 637
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/557 (50%), Positives = 386/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y RGKP
Sbjct: 98 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQRYERGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
TC + + + DR GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 156 ----TCELKVIGTTDRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFV 210
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R+++ P + +YN GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 211 DEREKNVKPIELKYN-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYT 265
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L GE +R+G
Sbjct: 266 ED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K++ A
Sbjct: 324 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIIDKAILA 383
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 384 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHKIII+
Sbjct: 444 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKIIIMA 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D EL+K+
Sbjct: 503 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDKELQKILQ 562
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+
Sbjct: 563 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTILMGDKVE 619
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 620 PRREFIEKNAKYVRNLD 636
>gi|384263637|ref|YP_005419344.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452854068|ref|YP_007495751.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|380496990|emb|CCG48028.1| DNA topoisomerase IV subunit B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|452078328|emb|CCP20078.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 640
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 97 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 155 VADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 210 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 268 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 507 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 567 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 FIEANARYVKNLD 639
>gi|387896530|ref|YP_006326826.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429503537|ref|YP_007184721.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|387170640|gb|AFJ60101.1| DNA gyrase subunit B [Bacillus amyloliquefaciens Y2]
gi|429485127|gb|AFZ89051.1| DNA gyrase subunit B [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 638
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 95 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 153 VADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 208 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 266 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 505 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +V+ R+
Sbjct: 565 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 625 FIEANARYVKNLD 637
>gi|260655480|ref|ZP_05860968.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
gi|260629928|gb|EEX48122.1| DNA gyrase, B subunit [Jonquetella anthropi E3_33 E1]
Length = 640
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 281/556 (50%), Positives = 387/556 (69%), Gaps = 23/556 (4%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTVWRDG EY Q+Y RG PV
Sbjct: 101 VLTVLHAGGKFDNRS--YKVSGGLHGVGVSVVNALSEWLEVTVWRDGYEYFQRYERGIPV 158
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L LP R+GTR+RF D Q+F +Q+ T+ R RE+AFL P LTI +
Sbjct: 159 APL-AKTLP---STRRGTRVRFLADSQIFD-EVQYSAETLVSRFREMAFLIPGLTITV-- 211
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCS 177
D + + + GG+ E+V++LN D+ L V G R DG+++++A Q+ +
Sbjct: 212 --EDQREGKTWTFCEEGGIAEFVRYLNRDRVVLFPEPLVVSGER---DGVSVEMAFQY-T 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y++ + +AN I T++GGTH+ G++++LTR +N +++ +++KD +LSGE +REGL
Sbjct: 266 DDYNERLFSFANLIHTVEGGTHVAGLRSALTRAVNEGARRAGALREKDENLSGEDLREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
TC++SV++ NP+FEGQTKT+LGN V+ VD + + L + + L I+ K++ A
Sbjct: 326 TCVVSVKLSNPQFEGQTKTKLGNGTVKGSVDSVIYDGLLGHFDEDSSALKPIVDKAVKAR 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR+LVR KS + SLPGKLADCSS EE E++IVEGDSAGGSAKQGRDR
Sbjct: 386 QAREAAKKARELVR-KSAMSGLSLPGKLADCSSKKAEECEVYIVEGDSAGGSAKQGRDRS 444
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILNVE+ + ++EI+ +I+ALG G+ G++F LRYHKIII+TDA
Sbjct: 445 FQAILPLRGKILNVEKARLDKILSSKEIRVIIQALGCGI-GDEFDLSKLRYHKIIIMTDA 503
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHI TLLLTFF+R+ K L +EG +Y+ VPPLY+V+ GK+V Y Y D +L+ + S+
Sbjct: 504 DVDGAHISTLLLTFFFRHMKELVEEGHVYLAVPPLYRVQSGKKVDYLYSDRQLRTLMDSY 563
Query: 478 PSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
++QR+KGLGEM P QLWETT++P R+LK++ ++DA A+ FS LMG +V+
Sbjct: 564 EVEGKSPAVQRYKGLGEMNPEQLWETTMDPATRLLKRIQVDDAIAADEYFSILMGDKVEP 623
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A+ V NLD
Sbjct: 624 RRDFIQTHAHEVRNLD 639
>gi|424845289|ref|ZP_18269900.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
gi|363986727|gb|EHM13557.1| DNA gyrase, B subunit [Jonquetella anthropi DSM 22815]
Length = 640
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/557 (50%), Positives = 389/557 (69%), Gaps = 25/557 (4%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTVWRDG EY Q+Y RG PV
Sbjct: 101 VLTVLHAGGKFDNRS--YKVSGGLHGVGVSVVNALSEWLEVTVWRDGYEYFQRYERGIPV 158
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L LP R+GTR+RF D Q+F +Q+ T+ R RE+AFL P LTI +
Sbjct: 159 APL-AKTLP---STRRGTRVRFLADSQIFD-EVQYSAETLVSRFREMAFLIPGLTITV-- 211
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLALQWC 176
D + + + GG+ E+V++LN D+ +PL V G R DG+++++A Q+
Sbjct: 212 --EDQREGKTWTFCEEGGIAEFVRYLNRDRVVLFPEPLV-VSGER---DGVSVEMAFQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y++ + +AN I T++GGTH+ G++++LTR +N +++ +++KD +LSGE +REG
Sbjct: 265 TDDYNERLFSFANLIHTVEGGTHVAGLRSALTRAVNEGARRAGALREKDENLSGEDLREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LTC++SV++ NP+FEGQTKT+LGN V+ VD + + L + + L I+ K++ A
Sbjct: 325 LTCVVSVKLSNPQFEGQTKTKLGNGTVKGSVDSVIYDGLLGHFDEDSSALKPIVDKAVKA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR+LVR KS + SLPGKLADCSS EE E++IVEGDSAGGSAKQGRDR
Sbjct: 385 RQAREAAKKARELVR-KSAMSGLSLPGKLADCSSKKAEECEVYIVEGDSAGGSAKQGRDR 443
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + ++EI+ +I+ALG G+ G++F LRYHKIII+TD
Sbjct: 444 SFQAILPLRGKILNVEKARLDKILSSKEIRVIIQALGCGI-GDEFDLSKLRYHKIIIMTD 502
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHI TLLLTFF+R+ K L +EG +Y+ VPPLY+V+ GK+V Y Y D +L+ + S
Sbjct: 503 ADVDGAHISTLLLTFFFRHMKELVEEGHVYLAVPPLYRVQSGKKVDYLYSDRQLRTLMDS 562
Query: 477 FPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ ++QR+KGLGEM P QLWETT++P R+LK++ ++DA A+ FS LMG +V+
Sbjct: 563 YEVEGKSPAVQRYKGLGEMNPEQLWETTMDPATRLLKRIQVDDAIAADEYFSILMGDKVE 622
Query: 536 TRKELIQNAANLV-NLD 551
R++ IQ A+ V NLD
Sbjct: 623 PRRDFIQTHAHEVRNLD 639
>gi|402570644|ref|YP_006619987.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
gi|402251841|gb|AFQ42116.1| DNA gyrase subunit B [Desulfosporosinus meridiei DSM 13257]
Length = 644
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 385/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+ +TVLHAGGKFGGS S Y VSGGLHGVGLSVVNALS+ L V V + G YHQ+YS GKP
Sbjct: 103 LALTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSKWLVVEVSKGGHVYHQEYSIGKP 162
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + V ++ GT+I F PD ++F + +D N +A R+REL+FLN +TI L
Sbjct: 163 TTKL----INVGETNKSGTKISFMPDSEIFEETV-YDFNILAHRLRELSFLNKSVTINLT 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E +D ++ + GG++++V++LN +K LH F + + D + +++ +Q+ +D
Sbjct: 218 DERTDVKET----FLHTGGIQDFVRYLNKNKDCLHPQPIFIETLKDSVQVEVCMQY-NDG 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + YAN+I T +GGTH G K++LTR +N +K+ +K D +L+G+ +REGLT
Sbjct: 273 YAENLFSYANNINTQEGGTHEAGFKSALTRVVNDYARKNNMIKAGDSNLTGDDIREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP+P+FEGQTKT+LGN E+R +VD + E L+ +LE +P + + KS+ A +A
Sbjct: 333 VISVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLSTFLEENPSIARKFIDKSVQAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQ
Sbjct: 393 RDAARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I A+G G+ +DF E RYHK+II+TDADV
Sbjct: 453 AILPLRGKIINVEKARLDKILGNTEIRAMITAMGTGIS-DDFDIEKARYHKLIIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L + +Y+ PPLYKV++GK +QY Y + EL KV
Sbjct: 512 DGAHIRTLLLTFFYRYMKPLIENNFVYIAQPPLYKVKKGKDIQYVYTEPELTKVLEKIGR 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + IQR+KGLGEM P QLWETT++P +R + ++ +EDA +FS LMG +V+ R++
Sbjct: 572 DKV-EIQRYKGLGEMNPEQLWETTMDPAKRTILRVTMEDAMRTEEMFSVLMGDKVEPRRD 630
Query: 540 LIQN-AANLVNLD 551
I A ++ NLD
Sbjct: 631 FINRYAKDVRNLD 643
>gi|228474176|ref|ZP_04058913.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
gi|228271871|gb|EEK13208.1| DNA gyrase, B subunit [Staphylococcus hominis SK119]
Length = 640
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 376/552 (68%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 155 QFDLK----EVGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 211 DEREDKEQRE-DTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 269 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 329 VVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 389 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|393809339|gb|AFN25843.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 376/552 (68%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EVGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DEREDKEQRE-DTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|421858603|ref|ZP_16290868.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
gi|410831899|dbj|GAC41305.1| type IIA topoisomerase [Paenibacillus popilliae ATCC 14706]
Length = 636
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 284/553 (51%), Positives = 378/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSESL VTV RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSESLIVTVKRDGHIYQQEYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT IRF PD + FT + +D+ T+ RIRELAFLN + + L
Sbjct: 153 QYDLKV----LGDTDETGTTIRFKPDAETFTDTLVYDYETLISRIRELAFLNKGIEMVL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
+D NQ + + GG+ E+V++LN +++ +H+ + D IT ++ALQ+ +D+
Sbjct: 208 ---TDERTNQTEIFKYDGGIIEFVEYLNRNRERMHEPPIYVEGQKDYITCEIALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH G K++LTR +N +K +KD +LSG+ VREGLT
Sbjct: 264 YTENIYSFANNIHTHEGGTHESGFKSALTRIINEYSRKMNLMKDNVSNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P + ++ K L A +A
Sbjct: 324 IVSVKIPEPQFEGQTKTKLGNSEVRSIVESLFAERLMEFMDENPAISRKVVEKGLQAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+L R+KS L SSLPGKLADCSS + E+FIVEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAARRARELTRRKSALEVSSLPGKLADCSSKDASQCELFIVEGDSAGGSAKQGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + N EI+ +I ALG G+ GEDF E RYHKIII+TDADV
Sbjct: 444 AILPLKGKILNVEKSRLDKILSNAEIRAIITALGTGI-GEDFDLEKARYHKIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPL+K+ER K V+Y + ++ + F
Sbjct: 503 DGAHIRTLLLTFFYRYMRKLIEAGYVYIAQPPLFKIERNKVVRYADSEKMRDEIIAEFGE 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM QLWETT++PE R + Q+ EDA A+ VF +LMG V+ R++
Sbjct: 563 GAKVNVQRYKGLGEMNAEQLWETTMDPESRSMLQVSFEDAKMADEVFDTLMGDNVEPRRD 622
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 623 FIQRHAKFVKNLD 635
>gi|91772465|ref|YP_565157.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
gi|91711480|gb|ABE51407.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242]
Length = 632
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 373/553 (67%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE +EV V RDG Y+Q+Y RG P
Sbjct: 92 VVLTVLHAGGKF--DKSNYKVSGGLHGVGVSVVNALSEWMEVEVKRDGKLYYQRYERGAP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ +T + GT+ F PD Q+F T +F + T+ R+RELAFLN + I +
Sbjct: 150 TSDVTV----IGDAKGTGTKSTFMPDSQIFETT-EFSYGTLITRLRELAFLNKGIRITIT 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
DS E+ + + + + GG+ +V+ LN + LH + F ++ +G +++A+Q+ +D+
Sbjct: 205 --DSREEELEQDVFEYEGGIISFVEHLNQSRTALHKTPIYFEREKEGTIVEIAMQY-TDS 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN+I T +GGTH+ G K +LTR N KK+ VK D L+GE +REGL
Sbjct: 262 YGEYVYSFANNINTYEGGTHLIGFKTALTRVANDYIKKNNVVKG-DEKLTGEDIREGLAA 320
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKT+LGN E++ +VD V E L+EY+E +P V I K+L A +A
Sbjct: 321 IISVKLTEPQFEGQTKTKLGNSELKGIVDSMVSEGLSEYMEENPKVAVIIFQKALDARRA 380
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L +LPGKLADCS P SE+++VEGDSAGGSAKQGR+RRFQ
Sbjct: 381 REAAKKARELTRRKSALEIGTLPGKLADCSEKDPSVSEVYLVEGDSAGGSAKQGRNRRFQ 440
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP RGKI+NVE+ + + KN E+ +LI A+G G+ ED+ E RYHK+II+TDADV
Sbjct: 441 AILPFRGKIINVEKARLSKVLKNNEVLSLITAMGTGI-AEDYNIEKARYHKVIIMTDADV 499
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFF+RY L D G +Y+ PPLY++++GK Y Y D EL
Sbjct: 500 DGAHIRTLILTFFFRYMAPLIDAGYVYIAQPPLYRIKKGKAEHYVYSDRELAAKLEEIGE 559
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y +QR+KGLGEM P QLWETT+NP+ R L Q+ ++DAA A+ +FS LMG V RK
Sbjct: 560 NNTY-VQRYKGLGEMNPEQLWETTMNPDTRTLLQVTMDDAAAADEMFSVLMGDEVAPRKA 618
Query: 540 LIQN-AANLVNLD 551
IQ A +VNLD
Sbjct: 619 FIQKYAKEVVNLD 631
>gi|424780808|ref|ZP_18207678.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
gi|422842733|gb|EKU27182.1| DNA gyrase subunit B [Catellicoccus marimammalium M35/04/3]
Length = 646
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/555 (49%), Positives = 375/555 (67%), Gaps = 15/555 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFGG S Y VSGGLHGVG SVVNALS SL+V V+++G Y Q+Y RG+ V
Sbjct: 101 VFTVLHAGGKFGGGS--YKVSGGLHGVGSSVVNALSTSLDVKVYKNGHIYFQEYKRGQVV 158
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + DR+GT + F PD +F F+ +T+A R+RELAFLN L I +
Sbjct: 159 DDLKI----IGDTDRRGTEVHFVPDPTIFKETTVFNFDTLATRVRELAFLNRGLKITI-- 212
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAY 180
ED + Q EY + GG+ YV++LN +K+ L + + + + ITI++A+Q+ S Y
Sbjct: 213 EDKRKGQEQQREYHYEGGICSYVEFLNDEKEVLFEPPIYCEGEQNNITIEVAMQYTS-GY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+L +AN+I T +GG H G K++LTR +N+ ++ K +K+ D L GE VREGLT +
Sbjct: 272 QSKILSFANNIHTYEGGMHESGFKSALTRVINNYARRQKMIKENDDKLMGEDVREGLTAV 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS++ P P+FEGQTKT+LGN EVR V D+ E ++L +P+V ++ K+L A KA
Sbjct: 332 ISIKHPEPQFEGQTKTKLGNSEVRSVTDRLFAEAFDKFLMENPNVAKKVVEKALLATKAR 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
LAAKRAR+ R+K+ L S+LPGKLADCSS E+ E+FIVEGDSAGGSAKQGRDR +QA
Sbjct: 392 LAAKRAREATRKKNELEISNLPGKLADCSSREAEKCELFIVEGDSAGGSAKQGRDRNYQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G G+DF E RYHK++I+TDADVD
Sbjct: 452 ILPIRGKILNVEKATLDKILANEEIRSLFTAMGTGF-GKDFDVEKARYHKLVIMTDADVD 510
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD--DAE--LKKVKSS 476
GAHIR LLLT FYRY + L ++G +Y+ PPLY V++GK + Y DAE L++V S
Sbjct: 511 GAHIRILLLTLFYRYMRPLVEKGYVYIAQPPLYGVKQGKNITYVPSGKDAEDQLQQVLQS 570
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P +QR+KGLGEM QLWETT++PE R + ++ I+DA EAN +F LMG +V+
Sbjct: 571 LPKTPKPIVQRYKGLGEMDEDQLWETTMDPEHRAMARVTIDDAEEANRIFEMLMGDQVEP 630
Query: 537 RKELIQNAANLVNLD 551
R++ I+ A+ +D
Sbjct: 631 RRQFIEENAHYATID 645
>gi|206900988|ref|YP_002251257.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
gi|206740091|gb|ACI19149.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12]
Length = 635
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/555 (51%), Positives = 394/555 (70%), Gaps = 20/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S+S Y +SGGLHGVGLSVVNALS LEV V RDG ++Q Y RGKP
Sbjct: 96 VVLTTLHAGGKF--SNSIYKISGGLHGVGLSVVNALSSKLEVEVMRDGKIFYQVYERGKP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T LT D+ GT+I+F+PD ++F T +FD++ +A R+RELAFLNPK+TI LR
Sbjct: 154 ITPLTVK----GETDKTGTKIKFYPDPEIFETT-KFDYDIVANRLRELAFLNPKVTIELR 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E + + N + + GGL E++++L+ K+ LH+ + ++ + +++ +Q+ S Y
Sbjct: 209 DERT----GRSNIFKYEGGLLEFIEYLSKGKEVLHEPIYMEREEGNLILEIVMQYNS-GY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +L Y N+I TI+GGTH+ G + +LTR +N+ + K+ + SLSG+ VREGLT I
Sbjct: 264 DELILSYVNNIHTIEGGTHVTGFRTALTRVVNNFARSWGLWKENE-SLSGDDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VP+P+FEGQTKT+LGN EVRK V++ V+E LTEY +PD I++K + A +A
Sbjct: 323 VSVKVPDPQFEGQTKTKLGNTEVRKFVEKVVEEELTEYFSKNPDTGKLIITKIIEAYRAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+LVR+KS+L S+ LPGKLADCS P + E+FIVEG+SAGGSAKQ RDRR+QA
Sbjct: 383 QAARKARELVRRKSLLESTLLPGKLADCSEKDPAKCELFIVEGESAGGSAKQARDRRYQA 442
Query: 361 ILPLRGKILNVERKDE-AAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
ILPLRGKILNVE+ + +EEI+ +I +LG G+ G+DF LRYHKIII+TDADV
Sbjct: 443 ILPLRGKILNVEKAQHLTKILSSEEIKAIIASLGTGI-GQDFDLSKLRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS--SF 477
DGAHIRTLLLTFFYR+ + L + G IY+ PPLY + +GK+ +Y Y + E +++ +
Sbjct: 502 DGAHIRTLLLTFFYRHFRPLIEGGYIYIAQPPLYLLRKGKEERYAYSEEEKEEILKEWGY 561
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P N IQR+KGLGEM P QL ETT++P++R+L Q+ IEDA EA +FS LMG V+ R
Sbjct: 562 PENVY--IQRYKGLGEMDPEQLRETTMDPQKRILLQVTIEDALEAERLFSILMGNNVEER 619
Query: 538 KELIQNAANLV-NLD 551
+ I+ A V NLD
Sbjct: 620 RNFIEQKAKFVRNLD 634
>gi|387928232|ref|ZP_10130910.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
gi|387587818|gb|EIJ80140.1| DNA gyrase subunit B [Bacillus methanolicus PB1]
Length = 640
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 289/553 (52%), Positives = 381/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + DR GT IRF PD ++FT ++FD+ T+A R+RELAFLN + I +
Sbjct: 156 CEDLKL----IGETDRTGTTIRFKPDGEIFTETLEFDYETLANRLRELAFLNRGIRITI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED E N+ NEY++ GG++ YV+ LN ++ LH+ + + DGIT+++ALQ+ +D
Sbjct: 211 -EDKRVE-NKRNEYYYEGGIKSYVEHLNRTREVLHEEPIYMEGEKDGITVEVALQY-NDG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S + +AN+I T +GGTH G K +LTR +N +K K+ D +LSGE VREGLT
Sbjct: 268 FSSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKHGIFKENDANLSGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ P+P+FEGQTKT+LGN EVR + D E +L +P V I+ K L +A
Sbjct: 328 IVSIKHPDPQFEGQTKTKLGNSEVRAITDTIFAENFETFLLENPSVARKIVEKGLMGARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+K+ L SSLPGKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ
Sbjct: 388 RLAAKKARELTRRKNALEVSSLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHKI+I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRAIITAVGTGI-GEDFDISKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV+ GK+++Y Y+D +L+++ S PS
Sbjct: 507 DGAHIRTLLLTFFYRYMRKILEAGYVYIAQPPLYKVQHGKRIEYAYNDRQLEQILSELPS 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ F LMG +V+ R++
Sbjct: 567 QPKPGIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLEDAIEADETFEILMGDKVEPRRQ 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAIYVKNLD 639
>gi|312897423|ref|ZP_07756847.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
gi|310621484|gb|EFQ05020.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359]
Length = 647
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/557 (50%), Positives = 391/557 (70%), Gaps = 21/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY +SGGLHGVG+SVVNALSE E+ V RDG + ++RG
Sbjct: 105 VVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSEQTEIEVKRDGFLWKISFARGLT 162
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +L V P++ + +GT++ F PD ++F + +D T+ R+RELAFLN LTI L
Sbjct: 163 VNSLE-KVRPLEEGEERGTKVWFKPDSEIFPDTV-YDFETLKIRLRELAFLNKGLTITL- 219
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV----GFRKDVDGITIDLALQWC 176
+D ++ Y++ GGL +VQ+LN ++ P++ V G + DV +D+ALQ+
Sbjct: 220 ---ADKRTDKKEIYYYEGGLTSFVQFLNENRTPVNQTVISLEGIKSDV---VVDIALQY- 272
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D YS+ +L + N+I T +GGTH+ G ++ LTRT+N G+ S +K+ + +LSGE VREG
Sbjct: 273 NDGYSENILTFVNNIFTEEGGTHLSGFRSGLTRTINDYGRSSGIIKENEDNLSGEDVREG 332
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV+V P+FEGQTKT+LGN EV+ +VD + + L E+ E HP SI++K+++A
Sbjct: 333 LTAIISVKVREPQFEGQTKTKLGNSEVKGIVDNIISDGLKEFFEEHPAEAKSIVTKNINA 392
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+K+ L SSLPGKLADCS P+ +EI++VEGDSAGGSAKQGRDR
Sbjct: 393 ARARQAARKARELTRRKNALEISSLPGKLADCSEKNPDMTEIYLVEGDSAGGSAKQGRDR 452
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKI+NVE+ + NEEI+ +I A G G+ GE+F RY KIII+TD
Sbjct: 453 KFQAILPLRGKIINVEKARLDKILANEEIRAMITAFGTGI-GEEFDITKRRYDKIIIMTD 511
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKS 475
ADVDGAHIRTLLLTFFYR+ K L EG +Y+ PPLY+V +G+ V Y Y D EL K+
Sbjct: 512 ADVDGAHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQVRKGRSVWYLYTDDELTNKLAE 571
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
NA+ +QR+KGLGEM P QLWETT++P+ R + ++ +EDA EA+ +FS LMG +V+
Sbjct: 572 VGNENAV--VQRYKGLGEMNPEQLWETTMDPQFRTMLKVELEDAVEADRIFSVLMGDKVE 629
Query: 536 TRKELIQ-NAANLVNLD 551
R++ IQ NA + NLD
Sbjct: 630 PRRKFIQDNAKKVRNLD 646
>gi|399889393|ref|ZP_10775270.1| DNA gyrase subunit B [Clostridium arbusti SL206]
Length = 636
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/557 (50%), Positives = 389/557 (69%), Gaps = 22/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGGS GY VSGGLHGVG SVVNALSE+ EV V R+G + Q Y RG
Sbjct: 95 VIMTVLHAGGKFGGS--GYKVSGGLHGVGASVVNALSETCEVIVKREGHIWRQLYHRGNV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + GT+I F PD +F I+F ++T+A R+RELAFLN + I
Sbjct: 153 ASPFE----EIGDTEEHGTQINFKPDSDIFE-EIEFSYDTLAQRLRELAFLNKGIKINFI 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D E + + + GG++ +V +LN +K+P+ + G++ D +++ALQ+
Sbjct: 208 DERHDKE----DTFHYEGGIKSFVSYLNRNKEPVFPEPIYIEGYKDDY---AVEIALQY- 259
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y++ + +AN+I T++GGTH+ G K++LTR LN +K +K+ D +LSG+ +REG
Sbjct: 260 NDGYAENLFSFANNIDTVEGGTHLAGFKSALTRALNDYARKFNFIKENDKNLSGDDIREG 319
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +IS+++ NP+FEGQTKT+LGN EVR +VD + E ++ +LE +P V I+ KSL A
Sbjct: 320 LTAVISIKLSNPQFEGQTKTKLGNSEVRGIVDNILGEKVSAFLEENPQVGKLIIDKSLLA 379
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR+L R+KSVL +++LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDR
Sbjct: 380 ARARDAAKKARELTRRKSVLETTALPGKLADCSSKDPAECEIYIVEGDSAGGSAKQGRDR 439
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKI+NVE++ + +E I+ +I A G G+ +DF E +RYH+III+TD
Sbjct: 440 KFQAILPLRGKIMNVEKQRIDKILNSEMIRAMITAFGAGIS-KDFNIEKIRYHRIIIMTD 498
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYKV +GK+ YCY + EL
Sbjct: 499 ADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLYKVSKGKKEIYCYLEDELDNALEE 558
Query: 477 FPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ SIQR+KGLGEM QLWETT++PE+R+L + +EDA A+ +F+ LMG +V+
Sbjct: 559 IGGKDNNTSIQRYKGLGEMNAEQLWETTMDPERRILLKATVEDAMAADEIFTILMGDKVE 618
Query: 536 TRKELI-QNAANLVNLD 551
R+E I QNA N+VNLD
Sbjct: 619 PRREFIQQNAKNVVNLD 635
>gi|326486756|gb|ADZ76421.1| DNA gyrase subunit B [Bacillus subtilis]
Length = 588
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/534 (50%), Positives = 368/534 (68%), Gaps = 11/534 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS L+VTV RDG + Q Y RG P
Sbjct: 65 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQTYKRGVP 122
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D GT F PD ++F+ ++D++ +A R+RELAFL + I +
Sbjct: 123 VTDLEI----IGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVRELAFLTKGVNITI- 177
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 178 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIYIEGEKDGITVEVALQY-NDS 235
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N +K +K+ D +LSG+ VREGLT
Sbjct: 236 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARKKGLIKENDPNLSGDDVREGLTA 295
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D + ++ +PD I+ K L A +A
Sbjct: 296 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARA 355
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 356 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 415
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 416 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 474
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D EL+++ + P
Sbjct: 475 DGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRVEYAYNDKELEELLKTLPQ 534
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +
Sbjct: 535 TPKPGLQRYKGLGEMNATQLWETTMDPSSRTLLQVTLEDAMDADETFEMLMGDK 588
>gi|222528063|ref|YP_002571945.1| DNA gyrase subunit B [Caldicellulosiruptor bescii DSM 6725]
gi|222454910|gb|ACM59172.1| DNA gyrase, B subunit [Caldicellulosiruptor bescii DSM 6725]
Length = 650
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/557 (49%), Positives = 386/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y RGKP
Sbjct: 111 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQRYERGKP 168
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
TC + + + DR GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 169 ----TCELKVIGTTDRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFV 223
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 224 DEREKNVKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYT 278
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L GE +R+G
Sbjct: 279 ED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K++ A
Sbjct: 337 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSERLAAFLEENPDVSKKIIDKAILA 396
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 397 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 456
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHK+II+
Sbjct: 457 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMA 515
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D EL+K+
Sbjct: 516 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDKELQKILQ 575
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+
Sbjct: 576 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTILMGDKVE 632
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 633 PRREFIEKNAKYVRNLD 649
>gi|312621133|ref|YP_004022746.1| DNA gyrase subunit B [Caldicellulosiruptor kronotskyensis 2002]
gi|312201600|gb|ADQ44927.1| DNA gyrase, B subunit [Caldicellulosiruptor kronotskyensis 2002]
Length = 650
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/557 (49%), Positives = 386/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y RGKP
Sbjct: 111 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQRYERGKP 168
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
TC + + + DR GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 169 ----TCELKVIGTTDRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFV 223
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 224 DEREKNVKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEIAIQYT 278
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L GE +R+G
Sbjct: 279 ED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDG 336
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PD+ I+ K++ A
Sbjct: 337 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSERLAAFLEENPDISKKIIDKAILA 396
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 397 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 456
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHK+II+
Sbjct: 457 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMA 515
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D EL+KV
Sbjct: 516 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDKELQKVLQ 575
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+
Sbjct: 576 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTILMGDKVE 632
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 633 PRREFIEKNAKYVRNLD 649
>gi|126179353|ref|YP_001047318.1| DNA gyrase, B subunit [Methanoculleus marisnigri JR1]
gi|125862147|gb|ABN57336.1| DNA gyrase subunit B [Methanoculleus marisnigri JR1]
Length = 656
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 284/574 (49%), Positives = 389/574 (67%), Gaps = 33/574 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-- 58
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L+ TV++DG Y ++ +G
Sbjct: 92 IVLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSSWLDATVFKDGNVYAMQFRQGLV 149
Query: 59 -KPVTTL--TCHVL--------------PVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTI 101
KP+ + T H + P+D + +GTRI F PD+ +F T ++FD++ +
Sbjct: 150 AKPLASRPETEHEMEARYEERYGARDGQPLDYERLRGTRITFQPDRSIFET-VEFDYDVL 208
Query: 102 AGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR 161
R+RELA+LN LTI LR D Y F G+ ++V L K+ LHD + +
Sbjct: 209 DHRLRELAYLNSGLTIVLR----DERTGDVVTYCFEDGIRQFVAHLGEGKESLHDDIIYF 264
Query: 162 KDVDG---ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 218
+ D + +++ALQ+ +++YS+T+ Y NS+ T +GGTH+EG +++LTR +NS ++
Sbjct: 265 QKRDSESKVEVEVALQY-NNSYSETIYTYVNSVNTREGGTHLEGFRSALTRAINSAAHRN 323
Query: 219 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 278
+K+ D + GE VREGL C+IS RV NP+FEGQTK RLGN VR +VD V LTEY
Sbjct: 324 NLLKNNDAQVKGEDVREGLACVISTRVANPQFEGQTKMRLGNSNVRGIVDSLVYSSLTEY 383
Query: 279 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 338
E HP L +++ K+++A +A AA+ AR+L R+KS L S+ LPGKLADC P +SE+
Sbjct: 384 FEEHPKTLQTVVDKAMAAARAREAARTARELARRKSTLESTGLPGKLADCQERDPAKSEL 443
Query: 339 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG 398
+IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ E + KN EIQ LI A+G GV G
Sbjct: 444 YIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKASEHKILKNAEIQALISAIGTGV-G 502
Query: 399 EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 458
+ F E RYH+II++TDADVDGAHIRTLLLTFFYRY L + G IY+ PPLY+V +G
Sbjct: 503 DSFDAERARYHRIILMTDADVDGAHIRTLLLTFFYRYMVGLVENGYIYIAQPPLYRVAKG 562
Query: 459 KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 518
+Q QY Y + E++++ + + + SIQR+KGLGEM QLW TT++P R+LKQ+ IED
Sbjct: 563 RQEQYVYREEEMREILAEWGEKGV-SIQRYKGLGEMNAGQLWSTTMDPANRILKQVKIED 621
Query: 519 AAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
AA AN +F LMG VD R++ I ++A + NLD
Sbjct: 622 AAYANEIFEKLMGENVDARRDFIRRHAKEVSNLD 655
>gi|415883916|ref|ZP_11545945.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
gi|387591711|gb|EIJ84028.1| DNA gyrase subunit B [Bacillus methanolicus MGA3]
Length = 640
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 289/553 (52%), Positives = 384/553 (69%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + DR GT IRF PD ++FT ++FD+ T+A R+RELAFLN + I +
Sbjct: 156 CEDLKV----IGETDRTGTTIRFKPDGEIFTETLEFDYETLANRLRELAFLNRGIRITI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED E N+ NEY++ GG++ YV+ LN ++ LH+ + + DGIT+++ALQ+ +D
Sbjct: 211 -EDKRVE-NKRNEYYYEGGIKSYVEHLNRTREVLHEEPIYMEGEKDGITVEVALQY-NDG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + +AN+I T +GGTH G K +LTR +N +K +K+ D +LSGE VREGLT
Sbjct: 268 FTSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKYGIIKENDANLSGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ P+P+FEGQTKT+LGN EVR V D E +L +P V I+ K L A +A
Sbjct: 328 IVSIKHPDPQFEGQTKTKLGNSEVRAVTDTIFAENFETFLLENPSVARKIVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+K+ L SSLPGKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ
Sbjct: 388 RLAAKKARELTRRKNALDVSSLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHKI+I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRAIITAIGTGI-GEDFDISKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYK+++GK+++Y Y+D +L+++ S PS
Sbjct: 507 DGAHIRTLLLTFFYRYMRKILEAGYVYIAQPPLYKIQQGKRIEYAYNDRQLEEILSELPS 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ F LMG +V+ R++
Sbjct: 567 QPKPGIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLEDAIEADETFEILMGDKVEPRRQ 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAIYVKNLD 639
>gi|452991700|emb|CCQ96924.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 636
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 388/552 (70%), Gaps = 16/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF ++S Y VSGGLHGVG+SVVNALSE L V RDG EY QK+ RG PV
Sbjct: 98 VLTILHAGGKF--NNSAYKVSGGLHGVGVSVVNALSEWLIAKVKRDGKEYMQKFERGVPV 155
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L V GT I F PDK++F + F+ T+ R+RE+AFLN + I L
Sbjct: 156 SELQI----VGEAKTTGTLINFKPDKEIFD-EVDFNFETLEYRLREMAFLNKGIMIKL-- 208
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D N ++ + GG++ +V+++N +K P+H D++ F + D I ++LA+Q+ +DAY
Sbjct: 209 --EDRRTNTNRKFHYEGGIKSFVEYINRNKNPIHKDIMYFEAEKDNIVVELAMQY-TDAY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ + +AN+I T +GGTH+ G++ +LTR +N G+K +K+KD +L G+ VREGL+ +
Sbjct: 266 SENIYTFANNINTQEGGTHLSGLRTALTRAINDYGRKYNYIKEKDENLQGDDVREGLSAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ P+FEGQTKT+LGN EVR +V+ +++T YLE +P +L K++SA +A
Sbjct: 326 LSVKLMEPQFEGQTKTKLGNSEVRGIVESLTYDFITRYLEENPKSGKIVLEKAVSASRAR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR++ R++S+L +++LPGKLADC S E +EI+IVEGDSAGGSAKQGRDR +QA
Sbjct: 386 EAARKAREISRKRSILDNTTLPGKLADCQSNDLEITEIYIVEGDSAGGSAKQGRDRGYQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + EEI+ +I A G G+ G++F E LRY KIII+TDADVD
Sbjct: 446 ILPLRGKILNVEKARLDRILGYEEIRAMITAFGTGI-GDEFDIEKLRYGKIIIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY + L D G +Y+ PPLYKV +G+ Y Y D EL+K+
Sbjct: 505 GAHIRTLLLTFFFRYMRELLDNGHVYIAQPPLYKVSKGRAEHYVYSDNELEKLLEEI-GR 563
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ YSIQR+KGLGEM P QLWETT++PE+R+L Q+ +ED A+ +F++LMG +V R+E
Sbjct: 564 SNYSIQRYKGLGEMNPEQLWETTMDPEKRILLQVTVEDGLVADEIFTTLMGDKVKPRREF 623
Query: 541 IQNAANLV-NLD 551
IQ A LV NLD
Sbjct: 624 IQKNAKLVKNLD 635
>gi|314935205|ref|ZP_07842558.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
gi|313656540|gb|EFS20279.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80]
Length = 644
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 376/552 (68%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V S ++ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EVGSTEKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DEREDKEQRE-DTYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|405984209|ref|ZP_11042512.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
gi|404388041|gb|EJZ83125.1| DNA gyrase, B subunit [Slackia piriformis YIT 12062]
Length = 649
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/563 (50%), Positives = 376/563 (66%), Gaps = 17/563 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+S VNALS LEV V RDG Y + RGK
Sbjct: 96 VVLTILHAGGKFGGE--GYKVSGGLHGVGVSCVNALSTRLEVEVKRDGGLYFIAFERGKT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + + GT+ FWPD +VFT + +D++T+A R RE+AFLN L I L
Sbjct: 154 VEKLR----RIGDAEGTGTKTTFWPDPEVFTETLVYDYSTLAQRFREMAFLNKGLHIELT 209
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
E D D +E F FAGG+ ++V ++N K+ L+ + F + D T+++A+QW S
Sbjct: 210 DERDLDGSGKPKSETFQFAGGIVDFVNYINEGKETLNKPIYFEAESDDGTVEIAMQWSSS 269
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
S+ +L +AN+I T +GGTH++G K +LTRT+N + +K+KD +LSG+ REGL
Sbjct: 270 YSSNGILAFANNINTHEGGTHLDGFKNALTRTINDYARTHGILKEKDSNLSGDDTREGLA 329
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV++ +P+FEGQTKT+LGN E+R +V +V + L E+LE +P I+ K+ ALK
Sbjct: 330 AIISVKLHDPQFEGQTKTKLGNTEIRGLVQGAVTKGLAEFLEENPAPAKRIIGKATQALK 389
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+K VL S S+PGKLADCSS P SEIFIVEGDSAGGSAKQ RDR++
Sbjct: 390 AREAARKAREMTRRKGVLDSFSMPGKLADCSSKDPALSEIFIVEGDSAGGSAKQARDRKY 449
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVER ++ I +LI A+G + G+D+ +A RYH+III+TDAD
Sbjct: 450 QAILPLRGKILNVERAGLNRALSSDTISSLITAIGTNI-GDDYNGDAARYHRIIIMTDAD 508
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-----GKQVQYCYDDAELKKV 473
VDGAHIR LLLTFFYRY L + G IY+ PPLY +++ GK ++Y ++D +
Sbjct: 509 VDGAHIRCLLLTFFYRYMPDLINRGYIYIAQPPLYGLKKKNSKSGKILKYLFNDEAKDAL 568
Query: 474 KSSFPSNA-LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
+A Y +QR+KGLGEM P QLWETT+ PE R L Q+ IEDAA A + S LMG
Sbjct: 569 MEELGDDAEKYDMQRYKGLGEMDPGQLWETTMEPETRTLLQVSIEDAAAAELAVSELMGD 628
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+V+ RKE IQ A V LDI
Sbjct: 629 QVEPRKEFIQKHARDVRF--LDI 649
>gi|346722695|ref|YP_001178861.2| DNA gyrase subunit B [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|345106666|gb|ABP65670.2| DNA gyrase, B subunit [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 639
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 383/555 (69%), Gaps = 20/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + S Y VSGGLHGVG SVVNALS LEV V+RDG Y+QKY RGKP
Sbjct: 100 VVFTVLHAGGKF--NESVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQKYERGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V C + + R GT++ F PD ++F T I+FD + + R+RELAFLN + I
Sbjct: 158 V----CDLKVIGQTQRTGTKVTFLPDDEIFET-IEFDADVLLQRLRELAFLNKGIRITFT 212
Query: 121 KEDSDPEKNQYN-EYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E EKN E + GG+ E+V++LN +K+ LH + + + + I +++A+Q+ +D
Sbjct: 213 DER---EKNPKTIELKYDGGIAEFVKFLNRNKEVLHPEPIYIEGEKNQILVEVAIQY-TD 268
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+ + + +AN+I TIDGGTH+ G KA++T+ +N KK VK D L GE +R+G+T
Sbjct: 269 QFGENIYSFANNIATIDGGTHLVGFKAAVTKAVNEYAKKYNFVKG-DNQLLGEDIRDGMT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K+L A K
Sbjct: 328 AVVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIIDKALLAAK 387
Query: 299 AALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A A++AR+LV ++KS L SS+LPGKLADCS PE+ EIFIVEGDSAGGSAKQGRDRR
Sbjct: 388 AREEARKARELVIKRKSALDSSNLPGKLADCSEKDPEKCEIFIVEGDSAGGSAKQGRDRR 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
+QAILPL GK+LNVE+ +Y N+++ LI+ALG G+ G D + LRYHK+I++ DA
Sbjct: 448 YQAILPLWGKMLNVEKASPDKIYSNDKLLPLIQALGCGI-GNDLDLKKLRYHKVIVMADA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y+D EL+K+
Sbjct: 507 DVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNDKELQKILQEM 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+ R
Sbjct: 567 KDA---QVQRFKGLGEMNAEELWETTMDPARRILLRVELEDAVMAEEIFTILMGEKVEPR 623
Query: 538 KELIQ-NAANLVNLD 551
+E I+ NA + NLD
Sbjct: 624 REFIEKNAKYVRNLD 638
>gi|336477181|ref|YP_004616322.1| DNA gyrase subunit B [Methanosalsum zhilinae DSM 4017]
gi|335930562|gb|AEH61103.1| DNA gyrase, B subunit [Methanosalsum zhilinae DSM 4017]
Length = 634
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 378/553 (68%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S+ Y VSGGLHGVG+SVVNALSE + V V R+G Y QKY RG P
Sbjct: 94 VVMTILHAGGKFDKST--YKVSGGLHGVGVSVVNALSEWMIVEVKRNGKHYLQKYKRGIP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT I+F PD +F + + ++T++ R+RELAFLN + I++
Sbjct: 152 EEDVAL----IGEADGSGTIIKFKPDSTIFE-ELDYSYDTLSSRLRELAFLNKGIRISIG 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
SD E + +Y GG+ +V LN +++ LHD + ++ D I +++A+Q+ +D
Sbjct: 207 DRRSDEESKETFQY--EGGIRSFVDHLNKNRQTLHDDPIYLEREKDNIMVEIAMQY-TDT 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH+ G K++LTR N KK+ KD D LSGE VREGLT
Sbjct: 264 YAEHVYSFANNINTHEGGTHLIGFKSALTRVTNDYIKKNNLTKD-DSKLSGEDVREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P P+FEGQTKTRLGN E++ +V+ V E L+++ E +P + + I+ KSLSA +A
Sbjct: 323 IISVKIPEPQFEGQTKTRLGNSELKGIVESLVSESLSDFFEENPKIANQIIQKSLSAKRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L S+LPGKLADCS P SE+++VEGDSAGGSAKQGR+R FQ
Sbjct: 383 REAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVSELYLVEGDSAGGSAKQGRNRAFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP RGKI+NVE+ + KN+EI +LI ALG G+ G+DF RYHKIII+TDADV
Sbjct: 443 AILPFRGKIINVEKSRLGKILKNKEILSLITALGTGL-GDDFDISKTRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTF +RY L D G +Y+ PPLYK+++GK Y Y + ELK+
Sbjct: 502 DGAHIRTLILTFIFRYMTPLIDAGYVYIAQPPLYKIKKGKAEHYAYTEKELKQKLKQLGE 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ S QR+KGLGEM P QLWETT++PE R L ++ ++DA A+ +FS LMG V RKE
Sbjct: 562 KGI-SYQRYKGLGEMNPEQLWETTMSPETRTLLKVTMDDAVTADEIFSILMGDEVAPRKE 620
Query: 540 LIQ-NAANLVNLD 551
IQ +A +VNLD
Sbjct: 621 FIQAHAREVVNLD 633
>gi|33469292|gb|AAQ19683.1| DNA gyrase subunit B [Staphylococcus haemolyticus]
Length = 644
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 375/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V S D+ GT IRF D ++FT +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EVGSTDKTGTVIRFKADGEIFTETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ LN +K+P+H+ + + D + I++A+Q+ S
Sbjct: 215 DEREDVEQRE-DTYHYEGGIKSYVELLNENKEPIHEEPIYIHQTKDDVEIEIAMQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRILNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ E+ +L HP+V ++ K + A +A
Sbjct: 333 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDRLFAEHFERFLYEHPNVARIVVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKKPEESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLAQGKQKYYVFNDRELDKLKSELSP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAIEADHTCEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|374605476|ref|ZP_09678403.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
gi|374388927|gb|EHQ60322.1| DNA gyrase subunit B [Paenibacillus dendritiformis C454]
Length = 636
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 378/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSESL VTV RDG + Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSESLIVTVKRDGHIHQQEYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT IRF PD ++FT + +DH T+ RIRELAFLN + + L
Sbjct: 153 QYDLKV----LGDTEETGTTIRFKPDPEIFTDTLVYDHETLVSRIRELAFLNKGIEMVLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E +D Q + + GG+ E+V++LN +++ +H+ + D IT ++ALQ+ +D+
Sbjct: 209 DERND----QTETFKYDGGIIEFVEYLNRNREKMHEPPIYVEGQKDYITCEIALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH G K++LTR +N +K +KD +LSG+ VREGLT
Sbjct: 264 YTENIYSFANNIHTHEGGTHESGFKSALTRIINEYARKMNLMKDNVSNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P + ++ K L A +A
Sbjct: 324 IVSVKIPEPQFEGQTKTKLGNSEVRSIVESLFAERLMEFMDENPAISRKVVEKGLQAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+L R+KS L SSLPGKLADCSS + E+FIVEGDSAGGSAKQGRDR FQ
Sbjct: 384 RDAARRARELTRRKSALEVSSLPGKLADCSSKDASQCELFIVEGDSAGGSAKQGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + N EI+ +I ALG G+ GEDF + RYHKIII+TDADV
Sbjct: 444 AILPLKGKILNVEKSRLDKILSNAEIRAIITALGTGI-GEDFDLDKARYHKIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPL+K+ER K V+Y + ++ + F
Sbjct: 503 DGAHIRTLLLTFFYRYMRRLIEAGYVYIAQPPLFKIERNKVVRYADSEKMRDEIIAEFGE 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
++QR+KGLGEM QLWETT++PE R + Q+ EDA A+ VF +LMG V+ R++
Sbjct: 563 GVKVNVQRYKGLGEMNAEQLWETTMDPESRSMLQVSFEDAKMADEVFDTLMGDNVEPRRD 622
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 623 FIQRHAKFVKNLD 635
>gi|125974861|ref|YP_001038771.1| DNA gyrase subunit B [Clostridium thermocellum ATCC 27405]
gi|256003883|ref|ZP_05428870.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281418684|ref|ZP_06249703.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|385777392|ref|YP_005686557.1| DNA gyrase subunit B [Clostridium thermocellum DSM 1313]
gi|419721172|ref|ZP_14248363.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
gi|419726568|ref|ZP_14253590.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|125715086|gb|ABN53578.1| DNA gyrase, B subunit [Clostridium thermocellum ATCC 27405]
gi|255992221|gb|EEU02316.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 2360]
gi|281407768|gb|EFB38027.1| DNA gyrase, B subunit [Clostridium thermocellum JW20]
gi|316939072|gb|ADU73106.1| DNA gyrase, B subunit [Clostridium thermocellum DSM 1313]
gi|380770165|gb|EIC04063.1| DNA gyrase, B subunit [Clostridium thermocellum YS]
gi|380782872|gb|EIC12479.1| DNA gyrase, B subunit [Clostridium thermocellum AD2]
Length = 641
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 375/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKF G GY VSGGLHGVG SVVNALSE LEV V+RDG Y Q+Y RGKP
Sbjct: 98 VVHTILHAGGKFDGQ--GYKVSGGLHGVGASVVNALSEFLEVEVFRDGHIYRQRYERGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + + GT+ F PD ++F +FD + R+RELAFLN L I LR
Sbjct: 156 VTPVEI----IGDTNLTGTKTTFKPDPEIFEVT-EFDFEVLLTRLRELAFLNKGLKIILR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
D PE+ + GG+ +V++++ +K PLH+ + F DG +++A+Q+ D Y
Sbjct: 211 --DERPEEPVEKHLHYEGGIVSFVEYMDRNKDPLHEPIYFDGYKDGCYVEIAMQYNKDVY 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GGTH+ G K ++T+ LN KK +K+ D +L GE VREGLT +
Sbjct: 269 VENIHSFANNISTAEGGTHLTGFKTAITKVLNDYAKKFNFLKENDKNLLGEDVREGLTAV 328
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++P+P+FEGQTKT+LGN EVR V+ + E +LE +P V IL K + + +A
Sbjct: 329 ISVKIPDPQFEGQTKTKLGNSEVRSFVESIINEKFASFLEENPSVTRLILDKCIMSARAR 388
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+K+VL +S+LPGKLADC+ P EIFIVEGDSAGGSAKQGR+RRFQA
Sbjct: 389 EAARKARELTRRKNVLETSTLPGKLADCTERDPSLCEIFIVEGDSAGGSAKQGRNRRFQA 448
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPL GK+LNVE+ +Y N+++ +I ALG + G+DF LRYHKIII+ DADVD
Sbjct: 449 ILPLWGKMLNVEKARVDKVYGNDKLTPVIMALGTNI-GQDFDITKLRYHKIIIMADADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFPS 479
GAHIRTLLLTFFYRY L G +Y+ PPLYK+ +GK Y Y+D+EL+K ++ +
Sbjct: 508 GAHIRTLLLTFFYRYMTPLITNGYVYIAQPPLYKITKGKTELYAYNDSELEKIIRENQWK 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+IQRFKGLGEM P QLW TT++PE R + ++ +EDA A+ +F+ LMG +V+ RKE
Sbjct: 568 KEECTIQRFKGLGEMNPEQLWTTTMDPETRTILRVELEDAIAADEIFTILMGDKVEPRKE 627
Query: 540 LIQNAANLV-NLD 551
IQ A LV NLD
Sbjct: 628 FIQANAKLVTNLD 640
>gi|404329035|ref|ZP_10969483.1| DNA gyrase subunit B [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 639
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 284/552 (51%), Positives = 383/552 (69%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS ++ V V+R+G Y+Q+Y RGKP
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTTMWVKVYRNGHIYYQEYHRGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + DR GT F PD ++F F++ T+ RIRELAFLN + I++
Sbjct: 156 VADLKI----IGDTDRTGTTTHFIPDPEIFKETTHFNYETLRVRIRELAFLNKNIRISI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
ED EK++ + + GG+ EYV +LN K+ LH + + DGI +++A+Q+ +D +
Sbjct: 211 -EDRR-EKDKKESFHYEGGIREYVAFLNRSKEVLHQPIDLEGEQDGIKVEIAMQY-NDGF 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GGTH G K +LTR +N +K++ +K D +LSGE VREGLT I
Sbjct: 268 ACQLYSFANNIHTHEGGTHEYGFKVALTRVINDYARKNQLMKSSDPNLSGEDVREGLTAI 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+ P+P+FEGQTKT+LGNPEVR + D + +L +PD+ I+ K A +A
Sbjct: 328 VSVKHPDPQFEGQTKTKLGNPEVRTITDNLFSNSFSRFLYENPDIARLIVEKGTIASRAR 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+KS L SSSLPGKLADC+S SE++IVEGDSAGGSAKQGRDR +QA
Sbjct: 388 SAAKKARELTRRKSSLESSSLPGKLADCTSRDASISELYIVEGDSAGGSAKQGRDRMYQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+ +I ALG GV G++F+ E RYHKIII+TDADVD
Sbjct: 448 ILPLRGKILNVEKARLDKILSNAEIRAMITALGTGV-GDEFRLEKARYHKIIIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYR+ + L ++G IY+ PPLY+V+ GK ++Y YDD EL K++ PSN
Sbjct: 507 GAHIRTLLLTFFYRFMRPLLEKGYIYIAQPPLYRVQYGKTLKYAYDDKELTKIQGELPSN 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
++QR+KGLGEM P QLWETT++PE R++ ++ +EDA EA+ +F LMG RV+ R++
Sbjct: 567 VKPALQRYKGLGEMNPEQLWETTMDPENRVVLKVHLEDAIEADQIFEMLMGDRVEPRRDF 626
Query: 541 IQNAANLV-NLD 551
IQ A+ V NLD
Sbjct: 627 IQENAHYVQNLD 638
>gi|383786730|ref|YP_005471299.1| DNA gyrase subunit B [Fervidobacterium pennivorans DSM 9078]
gi|383109577|gb|AFG35180.1| DNA gyrase, B subunit [Fervidobacterium pennivorans DSM 9078]
Length = 641
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/557 (49%), Positives = 382/557 (68%), Gaps = 18/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG SVVNALSE +EV V RDG Y Q+Y+RG+
Sbjct: 101 VVMTTLHAGGKF--SKESYKVSGGLHGVGASVVNALSEWMEVEVHRDGKIYRQRYARGQK 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + ++GT +RF PDK +FTT ++FD +TI R+R+LAFLNP +TI
Sbjct: 159 VTEVEV----IGETTKRGTIVRFKPDKTIFTT-VEFDSDTILTRLRDLAFLNPNVTI--- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E D N + ++GGL+E+V +LN +K LH+VV V + + +A Q+ +D+
Sbjct: 211 -EFIDERNNIHRTLHYSGGLKEFVSYLNRGEKTLHEVVYIEGSVQDVQVQVAFQY-TDSD 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ ++ + N+I+T+DGGTH+ G K + TR +N LGKK +K + GE +REG+T +
Sbjct: 269 TEEIISFVNNIKTVDGGTHVTGFKTAFTRVVNELGKKKNMIKGE--PFRGEDLREGMTAV 326
Query: 241 ISV-RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+V + P+FEGQTK++LGN EV+ V + V++ LT+Y E++ VL I+ K+ +A
Sbjct: 327 IAVLMMGTPQFEGQTKSKLGNEEVQDAVAKVVRDKLTDYFEVNESVLKVIIQKAQQTREA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+ V++KS L +S+LPGKLADC + EESE+FIVEGDSAGGSAKQ RDR FQ
Sbjct: 387 REAAKRAREAVKRKSSLGASTLPGKLADCITKNLEESELFIVEGDSAGGSAKQARDRNFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +E + KNE+I+++I A+G G G++F + LRY KIII+TDADV
Sbjct: 447 AILPLRGKILNVEKSNELKLLKNEQIRDIITAIGTGT-GDNFDESKLRYGKIIIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELKKVKSSFP 478
DGAHIRTLLL FYRY + L + G IYV +PPLYK+ G++ Y Y D ELK +S
Sbjct: 506 DGAHIRTLLLALFYRYMRPLLENGRIYVAMPPLYKLTVSGEKPVYLYSDEELKAKLASI- 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y IQR+KGLGEM P QLWETT+NP+ R + ++ IEDA EA+ +F LMG + R+
Sbjct: 565 NGKRYEIQRYKGLGEMNPEQLWETTMNPKTRKIIRITIEDAEEADNLFEILMGKDAEERR 624
Query: 539 ELIQNAANLVNLDHLDI 555
I A ++L LD+
Sbjct: 625 GYIMRHARQLSLVDLDV 641
>gi|374992786|ref|YP_004968285.1| DNA gyrase subunit B [Desulfosporosinus orientis DSM 765]
gi|357211152|gb|AET65770.1| DNA gyrase, B subunit [Desulfosporosinus orientis DSM 765]
Length = 644
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 275/551 (49%), Positives = 382/551 (69%), Gaps = 14/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKFGGS S Y VSGGLHGVGLSVVNALSE L V V + G Y Q+Y++GKP T
Sbjct: 105 LTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSEWLIVEVSKGGHIYRQEYAKGKPTT 164
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + + + GT+I F PD ++F + +D + +A R+REL+FLN +TI L+ E
Sbjct: 165 EL----MNIGTTKTNGTKITFLPDSEIFEIKV-YDFDILAHRLRELSFLNKNITIILKDE 219
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYS 181
+ E+ + AGG++++V +LN K LH + D + +++ +Q+ +D+Y+
Sbjct: 220 RTSVEET----FVHAGGIQDFVLYLNNSKDCLHSQPIYIETTKDNVQVEVCIQY-NDSYT 274
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G K++LTR +N +K+ +K D +LSG+ +REGLT +I
Sbjct: 275 ENLFSYANNINTQEGGTHEAGFKSALTRVINDYARKNNMLKPTDSNLSGDDIREGLTAVI 334
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+P+FEGQTKT+LGN E+R +VD + E L+ +LE +P + + KS+ A +A
Sbjct: 335 SVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLSIFLEENPAIARKFIEKSVQAARARD 394
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQAI
Sbjct: 395 AARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAI 454
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + N EI+ +I A+G G+ +DF RYHK+II+TDADVDG
Sbjct: 455 LPLRGKILNVEKARLDKILGNAEIRAMITAMGTGIS-DDFDISKARYHKLIIMTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFFYRY K L + IY+ PPL+KV++G+++QY Y D EL KV S +
Sbjct: 514 AHIRTLLLTFFYRYMKPLIENNFIYIAQPPLFKVKKGREIQYAYSDNELTKVLESIGRDK 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ IQR+KGLGEM P QLWETT++P +R + ++ +EDA +FS LMG +V+ R++ I
Sbjct: 574 V-EIQRYKGLGEMNPEQLWETTMDPAKRTILRVTMEDAMRTESMFSVLMGDKVEPRRDFI 632
Query: 542 QN-AANLVNLD 551
A ++ NLD
Sbjct: 633 NRYAKDVRNLD 643
>gi|310657321|ref|YP_003935042.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
gi|308824099|emb|CBH20137.1| DNA gyrase (subunit B) [[Clostridium] sticklandii]
Length = 641
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 383/552 (69%), Gaps = 13/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALS+ L V V +G Y Q+++ G P
Sbjct: 100 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKELIVEVKINGKIYRQEFAYGVPQ 157
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V +GT +RF PD VF Q+ ++T+ R+RELAFLN + I L
Sbjct: 158 TELEI----VGETTERGTCVRFMPDDAVFEET-QYKYDTLEHRLRELAFLNKGIHITL-- 210
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
ED + + E+ + GGL E+V+++N +K P+HD V+ F K T+++A+Q+ +DAY
Sbjct: 211 EDKREDLQKVKEFHYTGGLVEFVRYINKNKSPIHDDVIYFEKKQGDYTVEIAMQY-TDAY 269
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GG H+ G K +LTR +N KKS +K K+ +L GE +REGLT +
Sbjct: 270 VENVYSFANNINTHEGGMHLTGFKTALTRVINDYAKKSNFLKSKEDNLMGEDIREGLTAV 329
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S+++P+P++EGQTKT+LGNP+ R V+ + +T +L+ +P I+ K+L A +A
Sbjct: 330 VSIKLPDPQYEGQTKTKLGNPQARSAVETISGDNITIFLDENPASARIIVDKALRAQRAR 389
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+KSVL S+SLPGKLADC+ P +SEI++VEGDSAGGSAKQGRDR+ QA
Sbjct: 390 EAAKKARELTRRKSVLESTSLPGKLADCAEKDPVKSEIYLVEGDSAGGSAKQGRDRKTQA 449
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + ++EI+N+I A G G+ E F +E LRYHKI+I+TDADVD
Sbjct: 450 ILPLRGKILNVEKSRLDRILSSDEIRNMITAFGCGISNE-FDEEKLRYHKIVIMTDADVD 508
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTL+LTFF+RY + L ++G +Y+ PPL+++++G++ +Y Y D EL + +
Sbjct: 509 GAHIRTLILTFFFRYMRPLIEKGYVYIAQPPLFRIKKGRREEYVYSDKELNERLEEIGRS 568
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM QLW+TT+NP R L ++ IEDA+ A+ +FS LMG +V+ R+
Sbjct: 569 NQVELQRYKGLGEMNAEQLWDTTMNPATRTLLRVTIEDASMADDIFSMLMGDKVEPRRNF 628
Query: 541 IQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 629 IQENAKYVKNLD 640
>gi|425737844|ref|ZP_18856114.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
gi|425480997|gb|EKU48159.1| DNA gyrase subunit B [Staphylococcus massiliensis S46]
Length = 639
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 284/555 (51%), Positives = 372/555 (67%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S Y VSGGLHGVG SVVNALSE LEV V+R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGDS--YKVSGGLHGVGSSVVNALSEDLEVYVYRNETVYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + GT IRF D ++F + + T+ RIRELAFLN ++I L+
Sbjct: 155 QFDLK----EIGDTSLNGTTIRFKADPEIFQETTTYQYETLQNRIRELAFLNKGISITLK 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E + E+ + GG++ YV LN +K PLH+ V R+DV+ +++ALQ+
Sbjct: 211 DEREEEEREDNYY--YEGGIKSYVDLLNENKDPLHESPIYVHEQREDVE---VEIALQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ Y+ +L YAN+I T +GGTH +G K +LTR LNS G+K++ +K+ L+GE REG
Sbjct: 265 NRGYATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGQKNRLLKEDKERLTGEDTREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ +P+FEGQTKT+LGN EVR++VD+ E +L +P V I+ K L A
Sbjct: 325 LTAIVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLMENPQVGKIIVEKGLMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A +AAK+AR++ R+KS L S+LPGKLADCSS P ESEIF+VEGDSAGGS K GRD
Sbjct: 385 SRARIAAKKAREVTRRKSGLEVSNLPGKLADCSSKDPSESEIFLVEGDSAGGSTKLGRDS 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R QAILPLRGKILNVE+ + N EI+ +I A G G+ GEDF RYHKI+I+TD
Sbjct: 445 RTQAILPLRGKILNVEKSRLDKILNNNEIRMMITAFGTGI-GEDFDISKARYHKIVIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYR+ + L + G IY+ PPLYK+ +GKQ Y ++D EL K+KS
Sbjct: 504 ADVDGAHIRTLLLTFFYRFMRPLVEAGYIYIAQPPLYKLTQGKQKYYVFNDRELDKLKSE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA EA+ F LMG V+
Sbjct: 564 LKPTPKWSIARYKGLGEMDADQLWETTMNPEHRSMLQVKLEDAIEADQTFEMLMGDIVEN 623
Query: 537 RKELIQNAANLVNLD 551
R++ I++ A NLD
Sbjct: 624 RRQFIEDNAVYANLD 638
>gi|167629176|ref|YP_001679675.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
gi|167591916|gb|ABZ83664.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1]
Length = 641
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 275/551 (49%), Positives = 386/551 (70%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKFGG GY VSGGLHGVGLSVVNALSE L VTV R+G + Q Y RG +
Sbjct: 104 LTVLHAGGKFGGE--GYKVSGGLHGVGLSVVNALSEKLRVTVRRNGKIHEQHYERGVATS 161
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L V GT I F PD Q+F +++ ++T++ R+REL+FLN + I L
Sbjct: 162 ELRV----VGQSKETGTTIYFKPDPQIFD-ELEYSYDTLSHRLRELSFLNRGVRITL--- 213
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYS 181
+D Q + + +GG+ ++V++LN +K +H+ V+ F+ + DG+ +++ALQ+ +D Y
Sbjct: 214 -TDKRSGQESVFAHSGGIVDFVKFLNRNKDVIHNEVIYFQTEKDGVHVEVALQY-NDGYV 271
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G K +LTR +N ++ +KD + +LSGE +REG+T +I
Sbjct: 272 ENLFSYANNINTQEGGTHEAGFKTALTRVVNEYARRLNQLKDNENNLSGEDIREGITAVI 331
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+V P+FEGQTKT+LGN EVR ++D V E + YLE HP + I+ K++ A++A
Sbjct: 332 SVKVREPQFEGQTKTKLGNSEVRGIIDSCVTEGVGTYLEEHPSIAKRIIEKAIGAMRARE 391
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+K+ L S+SLPGKLADCS P E+++VEGDSAGGSAKQGRDRRFQAI
Sbjct: 392 AARKARELTRRKTALESTSLPGKLADCSFKDPSLCELYLVEGDSAGGSAKQGRDRRFQAI 451
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + NEEI+ +I A+G G+ GEDF RYH+I ++TDADVDG
Sbjct: 452 LPLRGKILNVEKSRLDKVLSNEEIRAIITAMGTGI-GEDFDLSKARYHRICLMTDADVDG 510
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFFYR+ K L + G +Y+ PPLY+V++ + V+Y Y D EL + +
Sbjct: 511 SHIRTLLLTFFYRHMKPLIENGYVYIAQPPLYQVKKNRDVRYFYHDNELNRYLEKTGRDG 570
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ +IQR+KGLGEM P QLWETT++P+ R + Q+ +EDAAEA ++F++LMG RV+ R++ I
Sbjct: 571 V-TIQRYKGLGEMNPEQLWETTMDPKNRTILQVSLEDAAEAELIFTTLMGDRVEPRRDFI 629
Query: 542 Q-NAANLVNLD 551
Q +A ++ NLD
Sbjct: 630 QSHAKDVRNLD 640
>gi|220927465|ref|YP_002504374.1| DNA gyrase subunit beta [Clostridium cellulolyticum H10]
gi|219997793|gb|ACL74394.1| DNA gyrase, B subunit [Clostridium cellulolyticum H10]
Length = 642
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/556 (50%), Positives = 387/556 (69%), Gaps = 16/556 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG S YSVSGGLHGVG SVVNALSES+EV V R+G Y QKYSRGKP
Sbjct: 97 VVHTILHAGGKFG--SGAYSVSGGLHGVGASVVNALSESMEVEVKREGHIYRQKYSRGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T++ V D GT F PD ++F I +D + + R RE+AFLN + I L
Sbjct: 155 LTSVDI----VGDTDETGTITTFKPDPEIFE-EIVYDFDAMISRYREMAFLNKGINIKLI 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D PE++ + GG+ +V++LN K+PLHD V+ D +++A+Q+ +D+
Sbjct: 210 --DERPEESVEKNLHYEGGIISFVEYLNKSKEPLHDEVIYLEGSRDANIVEVAMQY-NDS 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++++ YAN+I T +GGTH+ G +A++T+ LN +K +K+ D +LSGE VREGLT
Sbjct: 267 YNESVFTYANNIATTEGGTHLTGFRAAITKVLNDYARKFNILKENDKNLSGEDVREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++P P+FEGQTKT+LGN E+R +V+ V + L +LE HP V IL KS++A +A
Sbjct: 327 VLSVKLPEPQFEGQTKTKLGNSEIRTLVENVVSDKLFIFLEEHPAVAKIILDKSITAARA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS + SS+LPGKLADCS P ++EIFIVEGDSAGGSAKQGRDR+ Q
Sbjct: 387 REAARKARELTRRKSAMDSSTLPGKLADCSEKDPTKTEIFIVEGDSAGGSAKQGRDRKIQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL GK+LNVE+ +Y NE++ +I ALG G+ G++F LRY KIII+ DADV
Sbjct: 447 AILPLWGKMLNVEKSRMDKVYDNEKLSPVIIALGAGI-GDEFDTSKLRYDKIIIMADADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV---KSS 476
DG+HIR LLLTFF+RY + L ++G +Y+ +PPL+KV +GK+ Y YDD EL K+ +
Sbjct: 506 DGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPLFKVYKGKEEYYAYDDIELDKIFKERGW 565
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ +IQRFKGLGEM P QLWETT+NPE R + ++ +EDA A+ VF MG +V+
Sbjct: 566 RKDDPNVNIQRFKGLGEMNPDQLWETTMNPETRTIIKVDLEDAISADEVFCKFMGDKVEP 625
Query: 537 RKELIQ-NAANLVNLD 551
R+E IQ +A ++ NLD
Sbjct: 626 RREYIQMHARDVSNLD 641
>gi|312134087|ref|YP_004001425.1| DNA gyrase subunit B [Caldicellulosiruptor owensensis OL]
gi|311774138|gb|ADQ03625.1| DNA gyrase, B subunit [Caldicellulosiruptor owensensis OL]
Length = 637
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/557 (49%), Positives = 385/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y RG+P
Sbjct: 98 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKIYYQRYERGRP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
TC + + + D+ GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 156 ----TCELKVIGTTDKTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFL 210
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 211 DEREKNPKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAMQYT 265
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK K D L GE +R+G
Sbjct: 266 DD-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNLTKG-DTQLLGEDIRDG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K++ A
Sbjct: 324 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIIDKAILA 383
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 384 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHK+II+
Sbjct: 444 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMA 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++ EL+K+
Sbjct: 503 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEKELQKILQ 562
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ IEDA A +F+ LMG RV+
Sbjct: 563 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVEIEDAVMAEEIFTILMGDRVE 619
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 620 PRREFIEKNAKYVRNLD 636
>gi|397780370|ref|YP_006544843.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
gi|396938872|emb|CCJ36127.1| DNA gyrase subunit B [Methanoculleus bourgensis MS2]
Length = 656
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/574 (48%), Positives = 389/574 (67%), Gaps = 33/574 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-- 58
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNAL+ L+ TV+RDG Y ++ +G
Sbjct: 92 IVLTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALASWLDATVFRDGNVYEMQFRQGLV 149
Query: 59 -KPVTTL--TCHVL--------------PVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTI 101
KP+ + T H + P+D + QGTRI F PD+ +F T + FD++ +
Sbjct: 150 VKPLASRPETDHEMKIRYEERYGTRPAQPLDYERLQGTRITFQPDRSIFET-VNFDYDML 208
Query: 102 AGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR 161
R+RELA+LN LTI+LR E + Y F GG+ E+V + K+PLHD V +
Sbjct: 209 DHRLRELAYLNSGLTISLRDERTGDAIT----YCFEGGIREFVAHIGEGKEPLHDEVIYF 264
Query: 162 KDVDG---ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS 218
+ D + +++ALQ+ +++Y +T+ Y NS+ T +GGTH+EG ++++TR +N+ +++
Sbjct: 265 QKSDPESLVEVEVALQY-NNSYGETVYTYVNSVNTREGGTHLEGFRSAITRAINNSARRN 323
Query: 219 KTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEY 278
K D + GE VREGL +IS RV P+FEGQTK RLGN VR +VD V LTEY
Sbjct: 324 NLFKSNDAQVKGEDVREGLASVISTRVAEPQFEGQTKMRLGNSNVRGIVDSLVYSSLTEY 383
Query: 279 LELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEI 338
E HP L +I+ K+++A +A AA+ AR+L R+KS L ++ LPGKLADC P +SE+
Sbjct: 384 FEEHPKTLQAIVDKAMAAARAREAARNARELARRKSTLETTGLPGKLADCQERDPAKSEL 443
Query: 339 FIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG 398
+IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ E + KN EIQ LI A+G GV G
Sbjct: 444 YIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKASEHRILKNAEIQALISAIGTGV-G 502
Query: 399 EDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG 458
+ F E RYH++I++TDADVDGAHIRTLLLTFFYRY L + G IY+ PPLY++ RG
Sbjct: 503 DSFDVERARYHRVILMTDADVDGAHIRTLLLTFFYRYMMELVENGYIYIAQPPLYRIFRG 562
Query: 459 KQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED 518
KQ +Y Y + +++++ + F + +IQR+KGLGEM QLW TT++PE R+LKQ+ IED
Sbjct: 563 KQEKYAYREEDMREIIAEFGEKGV-TIQRYKGLGEMNAEQLWSTTMDPENRVLKQVRIED 621
Query: 519 AAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
A AN +F LMG VD R++ I ++A ++NLD
Sbjct: 622 AVYANEIFEKLMGENVDARRDFIRRHAKEVINLD 655
>gi|311032261|ref|ZP_07710351.1| DNA gyrase subunit B [Bacillus sp. m3-13]
Length = 636
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS L++ V RDG ++Q++++G P
Sbjct: 93 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSELKIYVHRDGKIHYQQFNKGVP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT I F PD+++FT ++D++T+A R+RELAFLN + I +
Sbjct: 151 NEDLKI----IGETDVTGTIIHFVPDEEIFTETKEYDYDTLAHRLRELAFLNKGIRITI- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
ED E + NEY + GG+ YV+ LN K+ +H+ V F + DGI+I++ALQ+ +D+
Sbjct: 206 -EDKREETPKKNEYHYEGGIASYVEHLNRTKEVIHEEVVFVEGEKDGISIEVALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE VREGLT
Sbjct: 264 YTSNLYSFANNISTYEGGTHESGFKTALTRVINDYARKNNIFKDADSNLTGEDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ P+P+FEGQTKT+LGN E R V D E +L +P I+ K L A +A
Sbjct: 324 IVSIKHPDPQFEGQTKTKLGNSEARTVTDSVFTEKFEGFLLENPSAARKIVEKGLMASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI++VEGDSAGGSAKQGRDR FQ
Sbjct: 384 RMAAKKARELTRRKSALEISSLPGKLADCSSKDPSISEIYVVEGDSAGGSAKQGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKI+I+TDADV
Sbjct: 444 AILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDISRARYHKIVIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPLYK+++GK+++Y Y+D +L+++ ++
Sbjct: 503 DGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLYKIQQGKKIEYAYNDRQLEEILATMSD 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT++P R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 563 QPKAGIQRYKGLGEMNPEQLWETTMDPVSRTLLQVSLQDAIEADETFEILMGDKVEPRRN 622
Query: 540 LIQNAANLV-NLD 551
IQ+ A V NLD
Sbjct: 623 FIQDNARYVKNLD 635
>gi|365155917|ref|ZP_09352259.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
gi|363627842|gb|EHL78686.1| DNA gyrase subunit B [Bacillus smithii 7_3_47FAA]
Length = 643
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 292/556 (52%), Positives = 380/556 (68%), Gaps = 18/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG Y+QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGNIYYQKYRRGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + DR GT + F PD ++FT FD++ +A RIRELAFLN + I +
Sbjct: 158 VEDLKT----IGHTDRTGTTVHFKPDPEIFTETTVFDYDVLATRIRELAFLNRNIKITI- 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
ED + + NEY + GG++ YV LN K+ LH+ V G + D I +++ALQ+
Sbjct: 213 -EDRREGQKRKNEYHYEGGIKSYVAHLNRTKEVLHEEPIYVEGLKDD---IQVEIALQY- 267
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
++ +S + +AN+I T +GGTH G K +LTR +N +K+ +KD D +LSGE VREG
Sbjct: 268 NEGFSSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNGLIKDSDQNLSGEDVREG 327
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ PNP+FEGQTKT+LGN E R V D E+ YL +P V I+ K L A
Sbjct: 328 LTAIVSIKHPNPQFEGQTKTKLGNSEARTVTDALFSEHFETYLLENPSVARKIVEKGLMA 387
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L SSLPGKLADCSS P SE+FIVEGDSAGGSAKQGRDR
Sbjct: 388 ARARLAAKKARELTRRKSALEVSSLPGKLADCSSRDPSISELFIVEGDSAGGSAKQGRDR 447
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GE+F RYHK++I+TD
Sbjct: 448 HFQAILPLRGKILNVEKARLDKILSNNEIRMIITALGTGI-GEEFDISKARYHKVVIMTD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+++Y Y+D +L ++ SS
Sbjct: 507 ADVDGAHIRTLLLTFFYRYMRQIIEAGYVYIAQPPLYKVSQGKRIEYAYNDRQLDEILSS 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P + IQR+KGLGEM P QLWETT++PE+R + Q+ +EDA EA+ F LMG +V+
Sbjct: 567 LPESPKPGIQRYKGLGEMNPEQLWETTMDPEKRAMLQVSLEDAIEADETFEMLMGDKVEP 626
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA ++ NLD
Sbjct: 627 RRQFIEENALHVKNLD 642
>gi|220930856|ref|YP_002507764.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
gi|219992166|gb|ACL68769.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
Length = 642
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 286/554 (51%), Positives = 392/554 (70%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGK 59
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS+ LEV V WRDG YHQKY+RG
Sbjct: 100 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSKWLEVEVCWRDGKVYHQKYNRGI 157
Query: 60 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
PV L + GT I F PD+++F + F + +A R++ELAFLN + I L
Sbjct: 158 PVYDLKV----IGECSGTGTTISFKPDEEIFED-VNFKYKVLAQRLKELAFLNKGVRIIL 212
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSD 178
R D E+ + +EY F GGL +V++LN +K PL D + ++ D +++A+Q+ +D
Sbjct: 213 R--DEREEEARQDEYCFEGGLVSFVKYLNKNKNPLFDEPFYLEEKDENREVEIAIQY-ND 269
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y D++ +AN+I T +GGTH+ G K++LTRT+N + +K+ D +L+GE +REG+T
Sbjct: 270 GYVDSIFTFANNINTREGGTHLSGFKSALTRTVNDYARSKGILKENDENLTGEDIREGIT 329
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISVR+ +P+FEGQTKT+LGN E+R VD ++ L +LE +P + I+ K+ SA +
Sbjct: 330 AIISVRLTDPQFEGQTKTKLGNSEIRGFVDSALSSNLRTFLEENPKIGKIIVEKARSAAR 389
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+AR+L R+K L +++LPGKLADCSS E +EI+IVEGDSAGGSAKQGRDR+F
Sbjct: 390 ARKAAKKARELTRRKGALSNTALPGKLADCSSRDTENTEIYIVEGDSAGGSAKQGRDRKF 449
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + NEEI+ LI A+G G+ G++F RY KIII+TDAD
Sbjct: 450 QAILPLRGKILNVEKARLNKILNNEEIRALITAIGTGI-GDEFDINKARYGKIIIMTDAD 508
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L + G IY+ PPLYKV++G++ +Y Y+D L+K+ +
Sbjct: 509 VDGAHIRTLLLTFFYRYMRPLIENGMIYIAQPPLYKVKKGRREEYVYNDRGLQKLLNDIG 568
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + ++QR+KGLGEM P QLWETT+NPE R++ ++ IEDA A+ F++LMG +V R+
Sbjct: 569 RDKI-TLQRYKGLGEMNPDQLWETTMNPENRIILKVKIEDAVVADETFTTLMGDKVQPRR 627
Query: 539 ELIQNAANLV-NLD 551
E IQ A+ V NLD
Sbjct: 628 EFIQEHAHEVQNLD 641
>gi|295694693|ref|YP_003587931.1| DNA gyrase subunit B [Kyrpidia tusciae DSM 2912]
gi|295410295|gb|ADG04787.1| DNA gyrase, B subunit [Kyrpidia tusciae DSM 2912]
Length = 635
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 381/553 (68%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF G GY VSGGLHGVG+SVVNALSE LEV VWR+G Y Q+YSRG P
Sbjct: 96 VVLTVLHAGGKFDGK--GYKVSGGLHGVGVSVVNALSEWLEVEVWREGSAYRQRYSRGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + DR GT++ F PD ++F + F ++ + GR+RELAFLN +TI L
Sbjct: 154 VTPLER----LGPTDRTGTQVTFKPDPEIFEDVV-FQYDILQGRLRELAFLNAGITIIL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
D + E+ + GG+ +V++LN K+ LH V + D + +++ALQ+ +D
Sbjct: 208 ---EDARDGRRQEFAYQGGIRSFVEYLNRSKEVLHQPPVYIAAEKDDVMVEVALQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y ++ +AN+I T +GGTH G K++LTR +N +K+ +KD D +++GE VREGLT
Sbjct: 264 YVPSLYSFANNIHTHEGGTHESGFKSALTRVINDYARKNNLLKDSDSNVTGEDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P+P+FEGQTKT+LGN EVR +V+ + E +LE +P V I+ K ++A +A
Sbjct: 324 IISVKIPDPQFEGQTKTKLGNSEVRGIVESAFGERFVVFLEENPAVARKIVDKCITAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKL DCSS ESE+++VEGDSAGGSAK GRDR FQ
Sbjct: 384 REAARKARELTRRKNALEVSSLPGKLWDCSSKDASESELYLVEGDSAGGSAKSGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A+G G++ DF RYHK++I+TDADV
Sbjct: 444 AILPLRGKILNVEKARMDKILSNNEIRAIITAIGTGIE-PDFDISRARYHKVVIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFFYRY + L + G +Y+ PPLY++++GK V+Y Y D E +
Sbjct: 503 DGSHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYRIQKGKVVRYAYSDQERDHIVGELKG 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + IQR+KGLGEM QLWETT++PE R L Q+ ++DA EA+ +FS LMG RV+ R+E
Sbjct: 563 D-VNDIQRYKGLGEMDAEQLWETTMDPESRTLLQVSMQDAIEADAIFSVLMGDRVEPRRE 621
Query: 540 LIQNAANLV-NLD 551
I+ A+ V NLD
Sbjct: 622 FIEAHAHFVRNLD 634
>gi|312143598|ref|YP_003995044.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311904249|gb|ADQ14690.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 636
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 271/549 (49%), Positives = 377/549 (68%), Gaps = 15/549 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF +S Y VSGGLHGVG+SVVNALSE L +T +G +Y Q + +G P
Sbjct: 97 VVLTTLHAGGKFNNNS--YKVSGGLHGVGVSVVNALSEKLVLTTHWEGNKYRQVFKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L + R GT IRF D +F A + +A R++E A+LN LT+ L
Sbjct: 155 TSKLE----KLGKTKRSGTVIRFKADSDIFA-ARDYKFENLAHRLQESAYLNKDLTLILI 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + EK + +Y GG++ +V++LN D+ ++ D++ F + +++A+Q+ +D
Sbjct: 210 DERGEGEKKKVFQY--DGGIKAFVEFLNKDRNVINEDIIYFESKPEDYEVEMAIQY-NDG 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + YAN+I TIDGG H+ G K +LTR +N+ K + + K SL G+ VREG+T
Sbjct: 267 YNERIYSYANNINTIDGGYHLTGFKTALTRAINNFAKNNNRLPAKISSLRGKDVREGITA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
II+V++P P+FEGQTKT+LGN E+R +V+ V EYL+ Y + +PD+ + ++ K++ A++A
Sbjct: 327 IINVKLPEPQFEGQTKTKLGNSELRSIVESEVYEYLSLYFDTNPDLANKVIDKAVQAVRA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
A+K+AR+L ++KS L S++LPGKLADCSS E+SE+FIVEGDSAGGSAKQGRDR FQ
Sbjct: 387 RKASKKARELTKRKSALNSNALPGKLADCSSKKAEKSELFIVEGDSAGGSAKQGRDRNFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVER + N EI ++I ALG G+ GEDF + LRYHKIII+TDADV
Sbjct: 447 AILPLKGKILNVERARLDKILNNTEIASIITALGAGI-GEDFNIKNLRYHKIIIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LT FYRY L +EG IY+ PPLYKV RGK +Y Y D EL + K +
Sbjct: 506 DGAHIATLILTLFYRYMPELIEEGYIYLAKPPLYKVSRGKSTKYLYSDQELAEYKKKHEN 565
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+S+QR+KGLGEM P QLW+TT++PE R+L ++ I+D EA+ +F+ LMG+ RKE
Sbjct: 566 ---FSLQRYKGLGEMNPRQLWDTTMDPENRVLLRVEIDDDFEADDIFTRLMGSNASLRKE 622
Query: 540 LIQNAANLV 548
I N A LV
Sbjct: 623 FIFNNAELV 631
>gi|374709302|ref|ZP_09713736.1| DNA gyrase subunit B [Sporolactobacillus inulinus CASD]
Length = 639
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/552 (50%), Positives = 380/552 (68%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS + V V+R+G Y+Q+Y RGKP
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKMWVKVYRNGHVYYQEYHRGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L + ++ GT F PD ++F FD++T+ R+RELAFLN + I++
Sbjct: 156 LADLKI----IGDSEQTGTTTHFEPDPEIFKDTTTFDYDTLRVRVRELAFLNKNIRISI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
ED E+ + + Y + GG+ YV++LN K+ +H+ + + DGI +++A+Q+ S +
Sbjct: 211 -EDRR-EEGKRDTYHYEGGIRSYVEFLNRSKEVIHEPIDLEGEKDGIKVEIAMQYNS-GF 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GGTH G K +LTR +N +K++ +K D +L+G+ VREGLT I
Sbjct: 268 TGQLYSFANNIHTHEGGTHEYGFKVALTRVINDYARKNQLIKASDPNLTGDDVREGLTAI 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN EVR + D E + YL +PDV I+ K L A +A
Sbjct: 328 VSIKHPDPQFEGQTKTKLGNSEVRAITDTLFSEAFSRYLLENPDVARLIVDKGLIASRAR 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQA
Sbjct: 388 TAAKKARELTRRKSSLEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRMFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+ +I ALG G+ G++F E RYHKIII+TDADVD
Sbjct: 448 ILPLRGKILNVEKARLDRILSNAEIRAMITALGTGI-GDEFNLEKARYHKIIIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYR+ + L + G +Y+ PPL++V+ GK + Y YDD +LK+++S+ P N
Sbjct: 507 GAHIRTLLLTFFYRFMRPLLENGYVYIAQPPLFRVQYGKTLLYAYDDNDLKRIQSNLPQN 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
++QR+KGLGEM P QLWETT++PE R++ Q+ +EDA EA+ F LMG RV+ R++
Sbjct: 567 VKPALQRYKGLGEMNPEQLWETTMDPENRLVLQVNLEDAIEADQTFEMLMGDRVEPRRDF 626
Query: 541 IQ-NAANLVNLD 551
IQ NA NLD
Sbjct: 627 IQKNAVYAQNLD 638
>gi|452210943|ref|YP_007491057.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
gi|452100845|gb|AGF97785.1| DNA gyrase subunit B [Methanosarcina mazei Tuc01]
Length = 634
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/553 (51%), Positives = 381/553 (68%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE EV V RDG +Y Q+Y RGKP
Sbjct: 94 VVMTILHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWTEVEVSRDGKKYFQRYIRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D GT+ F PD ++F T F ++ + R+RELAFLN L I L
Sbjct: 152 ----ESDVREIGTSDTTGTKTTFKPDTKIFETT-DFQYDILLNRLRELAFLNRGLIINL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A+Q+ ++
Sbjct: 206 KDLRSPE-GQAETFNYSGGIIEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIAMQY-TNG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+ VREGLT
Sbjct: 264 YTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DEKLTGDDVREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKT+LGN EV+ +VD V + L EY E +P V + IL K+L A +A
Sbjct: 323 IISVKLMEPQFEGQTKTKLGNSEVKGIVDSLVTDGLAEYFEENPKVANIILDKALLAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KSVL S+LPGKLADCS+ P E EI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 383 REAAKKARELTRRKSVLEVSTLPGKLADCSNKNPAECEIYIVEGDSAGGSAKQGRDRSFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ A + KN E+ +LI A+G GV EDF E RYHKIII+TDADV
Sbjct: 443 AILPLRGKILNVEKSRLAKILKNNEVISLITAIGTGV-SEDFDLENARYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT F+RY + L D G +Y+ PPLYK+++GK Y Y D EL
Sbjct: 502 DGAHIRTLLLTLFFRYMRHLIDAGYVYIAQPPLYKIKKGKMDYYAYSDKELADKVKELGE 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLWETT++PE R L Q+ +EDA A+ +F LMG V+ R+
Sbjct: 562 KGV-AIQRYKGLGEMNPGQLWETTMDPESRTLLQVTLEDAIRADEIFRILMGDEVEPRRN 620
Query: 540 LIQ-NAANLVNLD 551
I+ +A +V+LD
Sbjct: 621 FIETHAKEVVDLD 633
>gi|317120855|ref|YP_004100858.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
gi|315590835|gb|ADU50131.1| DNA gyrase subunit B [Thermaerobacter marianensis DSM 12885]
Length = 635
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 381/555 (68%), Gaps = 22/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF G + Y VSGGLHGVG+SVVNALSE LEV V R+G + Q+Y RGKP
Sbjct: 93 VVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVVNALSEWLEVEVRREGRIHRQRYRRGKP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V D D GT +RF PD ++F +F ++ + GR+RE+A LN L I L+
Sbjct: 151 DTDLEV-VGTTDPAD-TGTYVRFKPDPEIFEET-EFKYDVVVGRLREIALLNSGLYIELK 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + + N + F GGL +V LN K+PLH + + ++ + DG+ +++ALQW + +
Sbjct: 208 DERT----GERNLFQFMGGLRSFVALLNRTKEPLHPEPISYKGERDGVEVEMALQWTT-S 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y +T+ +AN+I T +GGTH G K +LTR +N +K+ +K+ + +LSG+ +REGLT
Sbjct: 263 YVETLYSFANTIHTHEGGTHEAGFKMALTRVVNDYARKANLIKNGEENLSGDDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++P P+FEGQTKT+LGN EVR VVD E L Y E +P V ++ K+++A++A
Sbjct: 323 VLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTGEALATYFEENPQVARRVVEKAITAMRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L ++LPGKL DC+ P +E+FIVEGDSAGGSAKQGRDRRFQ
Sbjct: 383 REAARKARELTRRKSALEVTALPGKLTDCTVRDPAMAELFIVEGDSAGGSAKQGRDRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPLRGKILNVE+ + ++EI+ LI A+G G+ GEDF + RYHKII++TDADV
Sbjct: 443 AVLPLRGKILNVEKARLDKILAHDEIRALITAIGTGI-GEDFDIQKARYHKIILMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL----KKVKS 475
DGAHIRTLLLTFF+RY K L + G +Y+ PPLY V GK+ Y YDD +L +++
Sbjct: 502 DGAHIRTLLLTFFFRYMKPLIEAGYVYIAQPPLYLVRMGKEEHYFYDDDQLEAFFRQIGK 561
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
P+ QRFKGLGEM QLWETT+NPE R L Q+ +EDA A+ +FS LMG+RV+
Sbjct: 562 RMPA------QRFKGLGEMNAEQLWETTMNPETRTLLQVTLEDAMAADQIFSILMGSRVE 615
Query: 536 TRKELIQNAANLVNL 550
R+E I+ A V
Sbjct: 616 PRREFIEQHARKVRF 630
>gi|312792288|ref|YP_004025211.1| DNA gyrase subunit B [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179428|gb|ADQ39598.1| DNA gyrase, B subunit [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 637
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/557 (49%), Positives = 386/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y RGKP
Sbjct: 98 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQRYERGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
TC + + +R GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 156 ----TCELKVIGETNRTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFV 210
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R++++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 211 DEREKNAKPIELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYT 265
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L GE +R+G
Sbjct: 266 ED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K++ A
Sbjct: 324 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIIDKAILA 383
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 384 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHKIII+
Sbjct: 444 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKIIIMA 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++ EL+++
Sbjct: 503 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEKELQRILQ 562
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+
Sbjct: 563 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTILMGDKVE 619
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 620 PRREFIEKNAKYVRNLD 636
>gi|317126747|ref|YP_004093029.1| DNA gyrase subunit beta [Bacillus cellulosilyticus DSM 2522]
gi|315471695|gb|ADU28298.1| DNA gyrase, B subunit [Bacillus cellulosilyticus DSM 2522]
Length = 640
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 377/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V DG ++Q + RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVEVHLDGKVHYQMFERGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT I+F PD ++FT ++D++T+A R+RELAFLN L I +
Sbjct: 156 SADLKV----IGETDKTGTIIKFKPDNEIFTETTEYDYDTLANRLRELAFLNRGLRILIS 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
+ +D +K EYF+ GG+ +V+ LN K+P+H+ F + DGI++++A+Q+ +D+
Sbjct: 212 DKRNDGKKA---EYFYEGGISSFVEHLNRTKEPIHEPPVFIESEKDGISVEIAMQY-NDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +L G+ VREGLT
Sbjct: 268 FASNLYSFANNINTHEGGTHESGFKTALTRVINDYARKNSLFKETDPNLIGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P+P+FEGQTKT+LGN E R + D E++ +Y+ +P+V I+ K + A +A
Sbjct: 328 IISVKIPDPQFEGQTKTKLGNSEARTITDSLFSEHMAKYMAENPNVARKIVEKGIMASRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RDAAKKARELTRRKSALEVSSLPGKLADCSSKDATISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I ALG G+ G DF RYHKIII+TDADV
Sbjct: 448 AILPLRGKILNVEKSRLDKILSNNEVRAIITALGTGIGG-DFDISKARYHKIIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L +EG +Y+ PPL+K+++GK VQY Y++ E++++
Sbjct: 507 DGAHIRTLLLTFFYRYMRPLLEEGYVYIAQPPLFKIQQGKTVQYAYNEKEMERIIKELAE 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM P QLWETT++P R Q+ +EDA A+ F +LMG +V+ R+E
Sbjct: 567 TPKPGLQRYKGLGEMNPTQLWETTMDPSTRTTLQVTLEDAMVADETFETLMGDKVEPRRE 626
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 627 FIQANAQYVKNLD 639
>gi|410672047|ref|YP_006924418.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
gi|409171175|gb|AFV25050.1| DNA gyrase subunit B [Methanolobus psychrophilus R15]
Length = 634
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/554 (49%), Positives = 387/554 (69%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S+ Y VSGGLHGVG+SVVNALSE LE V RDG Y+Q+Y RGKP
Sbjct: 94 VVMTILHAGGKFDKST--YKVSGGLHGVGVSVVNALSEWLEAEVKRDGKLYYQRYERGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ + + GT+I F PD +F T +F ++T+ R+RELAFLN + I++
Sbjct: 152 ----HDDIMEIGESEGTGTKITFKPDPLIFETT-KFVYDTLVTRLRELAFLNKGIKISI- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
D E+ Q + + GG+ +V++LN + LH+ + F ++ +G +++A+Q+ +D+
Sbjct: 206 -SDLRIEQPQQEVFQYEGGIVSFVKYLNHSRNVLHESPIYFEREKEGTVVEIAMQY-TDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH+ G KA+LTR N +++K K +D LSGE +REGLT
Sbjct: 264 YAEYVYSFANNINTHEGGTHLVGFKAALTRVANDYIRQNKMAKGED-KLSGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKT+LGN +V+ +V+ V E L+EY+E +P V ++IL K+L A +A
Sbjct: 323 IISVKITEPQFEGQTKTKLGNSDVKGIVESMVSEGLSEYMEENPKVANAILQKALDAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+K+ L S+LPGKLADCS P EI++VEGDSAGGSAKQGR+RRFQ
Sbjct: 383 REAAKKARELTRRKNALDISTLPGKLADCSEKDPSLCEIYLVEGDSAGGSAKQGRNRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP RGKILNVE+ A + KN E+ +LI A+G G+ G+D+ + RYHK+II+TDADV
Sbjct: 443 AILPFRGKILNVEKARLAKVLKNNEVLSLITAMGTGI-GDDYNLDKARYHKVIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVKSSFP 478
DGAHIRTL+LT F+R+ K L D G IY+ PPLY+V +GK Y Y D EL+ K++
Sbjct: 502 DGAHIRTLILTLFFRHMKPLIDAGYIYIAQPPLYRVAKGKAEYYVYSDRELQAKLQELGD 561
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N IQR+KGLGEM P QLWETT+NPE R L ++ ++DA A+ +FS LMG V+ R+
Sbjct: 562 KNV--GIQRYKGLGEMNPEQLWETTMNPETRTLLRVTMDDAIAADEMFSILMGDEVEPRR 619
Query: 539 ELI-QNAANLVNLD 551
I +A ++VNLD
Sbjct: 620 NFITTHARDVVNLD 633
>gi|169335585|ref|ZP_02862778.1| hypothetical protein ANASTE_02000 [Anaerofustis stercorihominis DSM
17244]
gi|169258323|gb|EDS72289.1| DNA gyrase, B subunit [Anaerofustis stercorihominis DSM 17244]
Length = 636
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 387/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+ +T+LHAGGKF S Y VSGGLHGVG+SVVNALSE L V V+++G Y QKY RGKP
Sbjct: 95 IALTMLHAGGKF--DSGTYKVSGGLHGVGVSVVNALSEHLTVNVYQNGQVYEQKYERGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T L V R GT + F PD ++F+ + F+++T+ RIRELAFLN L I L+
Sbjct: 153 ITGLEV----VGKTKRTGTTVFFKPDGEIFSELV-FNYDTLKHRIRELAFLNKGLNITLK 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D+ K+Q + + GG+ E+V + N K+ L +V+ F K+ D +++A+Q+ S +
Sbjct: 208 --DTREGKDQEESFHYEGGIIEFVDYANRGKEKLTPEVIYFEKESDVCMLEVAMQF-STS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+++ +AN+I T++GG H+ G K +LTR++N+ +K +KD + +LSG+ +REGL
Sbjct: 265 YSESIYSFANNINTVEGGMHVNGFKTALTRSINAYARKYNILKDNEENLSGDDIREGLCV 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +PEFEGQTKT+LGNPEVR VD +V + ++ YLE HP V I+ K+L+A +A
Sbjct: 325 VISVKLADPEFEGQTKTKLGNPEVRGYVDTTVGDNISSYLEEHPPVAKIIVEKALTAQRA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A+DLVR+KSVL S++LPGKLADC P + EI+IVEGDSAGGSAK GR+ + Q
Sbjct: 385 RKAARKAKDLVRRKSVLESTALPGKLADCREKDPSKCEIYIVEGDSAGGSAKLGRNSKTQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + + I+++I A G G+ E+F E RYHKI+I+TDADV
Sbjct: 445 AILPLRGKILNVEKARLDRILNTDTIRSMITAFGTGIS-EEFNIEKARYHKIVIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D G +Y+ PPLYK+E+ K+V Y Y D +L++
Sbjct: 504 DGAHIRTLLLTFFYRYMRGLIDAGYVYIAQPPLYKLEKQKKVWYLYSDEQLEEKLQEIGR 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +QR+KGLGEM QLW+TT+NPE R L Q+ I+DAA A+ +FS LMG +V RK+
Sbjct: 564 DKI-GLQRYKGLGEMNGEQLWDTTMNPENRTLLQVSIDDAAYADEIFSILMGDQVQPRKD 622
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 623 FITENARKVQNLD 635
>gi|293400051|ref|ZP_06644197.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453209|ref|ZP_09545105.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
gi|291306451|gb|EFE47694.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371964048|gb|EHO81586.1| DNA gyrase, B subunit [Eubacterium sp. 3_1_31]
Length = 648
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/552 (49%), Positives = 378/552 (68%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I T+LHAGGKFGG + Y VSGGLHGVG SVVNALSE LEVTV+++G Y ++ G K
Sbjct: 109 IFTILHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVTVYQNGNIYFMRFENGGKA 166
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +L + D+ G+ +RF D +FT +D T+ RIR+LAFLN + + L
Sbjct: 167 VESLKI----IGKTDKHGSMVRFKADPTIFTETQVYDFETLNTRIRQLAFLNKSIKLILT 222
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E + K Y + GG+ +YV++LN +K PLH+ V + + + DGI ++ALQ+ +D
Sbjct: 223 DEREEERKEIV--YKYDGGIRQYVEYLNQNKSPLHEEVVYVEGIEDGILAEIALQY-NDG 279
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T +GGTH +G + +LTR +N+ +++ +K KD +L+G+ VREGLT
Sbjct: 280 YVPNIYSFCNNINTAEGGTHEDGFRLALTRIVNAYARENGMIK-KDETLAGDDVREGLTA 338
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+V + E L ++ +PD I+ K + A KA
Sbjct: 339 IISVKHPDPQYEGQTKTKLGNSEVRKIVSSILGEQLEKFFLENPDTAKIIIDKCILASKA 398
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQ
Sbjct: 399 RMAAKKARELTRRKSALEISSLPGKLADCSSRDASECEIYIVEGDSAGGSAKQGRNSKFQ 458
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +++N EI+++I A G G+ GE+ LRYHKIII+TDADV
Sbjct: 459 AILPLRGKILNVEKARLHRIFENNEIRSMITAFGCGI-GEEMDISKLRYHKIIIMTDADV 517
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LTFFYR+ + + + G +Y+ +PPL+K+++G++++Y YD++ +V +
Sbjct: 518 DGAHICTLMLTFFYRFLRPIIEGGYVYIAMPPLFKIQKGQRIEYVYDESSRDRVIAEMGE 577
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N SIQR+KGLGEM P QLWETT++P R LK++ I DA EA+ VF LMG V R+E
Sbjct: 578 NV--SIQRYKGLGEMNPEQLWETTMDPAFRTLKKVNINDAMEADKVFEMLMGEEVGPRRE 635
Query: 540 LIQNAANLVNLD 551
IQ A LD
Sbjct: 636 FIQENAVYAELD 647
>gi|315659991|ref|ZP_07912849.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|385782961|ref|YP_005759134.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|418415558|ref|ZP_12988763.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635480|ref|ZP_13197855.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|315494892|gb|EFU83229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
lugdunensis M23590]
gi|339893217|emb|CCB52398.1| DNA gyrase subunit B [Staphylococcus lugdunensis N920143]
gi|374841747|gb|EHS05203.1| DNA gyrase, B subunit [Staphylococcus lugdunensis VCU139]
gi|410875014|gb|EKS22944.1| DNA gyrase subunit B [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 644
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 375/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT IRF D ++FT +D++T+ RIRELAFLN ++I L+
Sbjct: 159 QFDLK----EVGETDKTGTVIRFKADSEIFTETTVYDYDTLQKRIRELAFLNKGISITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ +N +K+P+H+ + + D I I++A+Q+ S
Sbjct: 215 DERDDEEQRE-DTYHYEGGIKSYVELMNENKEPIHEEPIYIHQMKDDIEIEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G KSK +K+ LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTKSKIIKEDKDRLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ EY +L +P+V I+ K + A +A
Sbjct: 333 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEYFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIFIVEGDSAGGS K+GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSHLEISSLPGKLADCSSKNPDESEIFIVEGDSAGGSTKEGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKSRLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y ++D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNDKELDKLKSELSP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NP+ RM+ Q+ ++DA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPDNRMMLQVRLDDAIEADKTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A LD
Sbjct: 632 FIEDNAVYATLD 643
>gi|319651104|ref|ZP_08005238.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
gi|317397274|gb|EFV77978.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2]
Length = 642
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/553 (51%), Positives = 380/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +Y+QK+ RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTVLEVFVHRDGQKYYQKFERGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT I F PD ++FT +++D+ T+A RIRELAFLN L I +
Sbjct: 158 SADLEV----IGETDHTGTTIHFKPDSEIFTETLEYDYETLANRIRELAFLNRGLKITI- 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E+N+ +EY + GG++ YV+ LN K+ LH+ + + +GIT+++++Q+ +D
Sbjct: 213 --EDKREENKKSEYMYEGGIKSYVEHLNRTKEVLHEEPIYIDGEREGITVEVSIQY-NDG 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +LSGE VREGLT
Sbjct: 270 FTSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNGVFKESDANLSGEDVREGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+ P+P+FEGQTKT+LGN EVR D E L +++ +P V I+ K L A +A
Sbjct: 330 IVSVKHPDPQFEGQTKTKLGNSEVRAATDTIFSEALEKFMLENPTVARKIVEKGLMAARA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L SSLPGKLADCSS P SE+++VEGDSAGGSAKQGRDR FQ
Sbjct: 390 RLAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRDRHFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHKI+I+TDADV
Sbjct: 450 AILPLRGKILNVEKARLDKILSNNEVRAIITAIGTGI-GEDFDISRARYHKIVIMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPLYK+++GK+++Y Y+D EL K+ PS
Sbjct: 509 DGAHIRTLLLTFFYRYMRQIIEAGYIYIAQPPLYKIQQGKKIEYAYNDRELDKILGELPS 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT+NPE R L Q+ +EDA EA+ F LMG +V+ R+
Sbjct: 569 QPKPGIQRYKGLGEMNPGQLWETTMNPESRTLLQVNLEDAIEADETFEILMGDKVEPRRN 628
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 FIEENAVYVKNLD 641
>gi|329121792|ref|ZP_08250408.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
gi|327468065|gb|EGF13553.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister
micraerophilus DSM 19965]
Length = 646
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 381/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY++SGGLHGVG+SVVNALSE +V V RDG + + RG
Sbjct: 104 VVLTVLHAGGKFGGE--GYAISGGLHGVGISVVNALSEWTKVNVRRDGKFHEMAFCRGDV 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ + GT + F PD +F FD++T+ R+RELAFLN L I L
Sbjct: 162 SESMRTY----GETSETGTTVTFKPDPLIFKEGTDFDYDTLKVRMRELAFLNKGLRITL- 216
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D+ ++ E+ +AGG+ E++++LN K +HD V+ F + D I +D+A+Q+ +
Sbjct: 217 -SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDAVHDDVISFEGERDKIIVDIAMQYQT-G 274
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS++M + N I T +GG H+ G +++LTRT+N + + +K+ + +L+G+ VREGLTC
Sbjct: 275 YSESMYTFVNDINTTEGGMHLSGFRSALTRTINDYARTNNLLKENEDNLTGDDVREGLTC 334
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VPNP+FEGQTKT+LGN EV+ VVD V E L YLE HP I+ K ++A +A
Sbjct: 335 VISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVSEGLHIYLEEHPSEARLIVEKGITASRA 394
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+K+ L SSLPGKL+DCS P+++EI+IVEGDSAGGSAK GRDRR+Q
Sbjct: 395 REAAKRARELTRRKNALEVSSLPGKLSDCSEKDPKKTEIYIVEGDSAGGSAKSGRDRRYQ 454
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + ++ I+ +I A G GV E F LRY+KIII+TDADV
Sbjct: 455 AILPLRGKILNVEKARVDRVLNSDTIRMMITAFGTGVS-EGFDISKLRYYKIIIMTDADV 513
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L EG +Y+ PPLY+V +G+Q Y YDD E K+
Sbjct: 514 DGAHIRTLLLTFFYRYMKPLITEGHVYIAKPPLYQVRKGRQKYYTYDDDEQNKLLDEIGR 573
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLW TT+NPEQR++ ++ + DA EA+ +F+ LMG +V+ R++
Sbjct: 574 DGC-TIQRYKGLGEMDPEQLWNTTMNPEQRVMMRVELTDAVEADRLFTILMGDKVEPRRK 632
Query: 540 LI-QNAANLVNLD 551
I +NA N+ NLD
Sbjct: 633 FIEENAMNVTNLD 645
>gi|289551838|ref|YP_003472742.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
gi|289181369|gb|ADC88614.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01]
Length = 640
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 375/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNETIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT IRF D ++FT +D++T+ RIRELAFLN ++I L+
Sbjct: 155 QFDLK----EVGETDKTGTVIRFKADSEIFTETTVYDYDTLQKRIRELAFLNKGISITLK 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + + Y + GG++ YV+ +N +K+P+H+ + + D I I++A+Q+ S
Sbjct: 211 DERDDEEQRE-DTYHYEGGIKSYVELMNENKEPIHEEPIYIHQMKDDIEIEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G KSK +K+ LSGE REGLT
Sbjct: 269 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTKSKIIKEDKDRLSGEDTREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ EY +L +P+V I+ K + A +A
Sbjct: 329 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEYFERFLYENPNVARIIVEKGIMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIFIVEGDSAGGS K+GRD R Q
Sbjct: 389 RVAAKKAREVTRRKSHLEISSLPGKLADCSSKNPDESEIFIVEGDSAGGSTKEGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKSRLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y ++D EL K+KS
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNDKELDKLKSELSP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NP+ RM+ Q+ ++DA EA+ F LMG V+ R++
Sbjct: 568 TPKWQISRYKGLGEMNADQLWETTMNPDNRMMLQVRLDDAIEADKTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A LD
Sbjct: 628 FIEDNAVYATLD 639
>gi|375006808|ref|YP_004980435.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359285651|gb|AEV17335.1| DNA gyrase subunit B [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 640
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/556 (51%), Positives = 380/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q+Y RG+P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQRYERGEP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 156 CTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITLT 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +++ALQ+
Sbjct: 212 DERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAVEIALQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+GE VREG
Sbjct: 265 NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDTNLTGEDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I+ K + A
Sbjct: 325 LTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKIVEKGMMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 385 ARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYHK+II+TD
Sbjct: 445 HFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYHKVIIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F LMG +V+
Sbjct: 564 LPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEILMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENARYVKNLD 639
>gi|313892202|ref|ZP_07825795.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
gi|313119340|gb|EFR42539.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E]
Length = 646
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 381/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY++SGGLHGVG+SVVNALSE +V V RDG + + RG
Sbjct: 104 VVLTVLHAGGKFGGE--GYAISGGLHGVGISVVNALSEWTKVNVRRDGKFHEMAFCRGDV 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ + GT + F PD +F FD++T+ R+RELAFLN L I L
Sbjct: 162 TESMRTY----GETSETGTTVTFKPDPLIFKEGTDFDYDTLKVRMRELAFLNKGLRITL- 216
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D+ ++ E+ +AGG+ E++++LN K +HD V+ F + D I +D+A+Q+ +
Sbjct: 217 -SDNRDGVSRVEEFHYAGGIVEFIKFLNEGKDAVHDDVISFEGERDKIIVDIAMQYQT-G 274
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS++M + N I T +GG H+ G +++LTRT+N + + +K+ + +L+G+ VREGLTC
Sbjct: 275 YSESMYTFVNDINTTEGGMHLSGFRSALTRTINDYARTNNLLKENEDNLTGDDVREGLTC 334
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VPNP+FEGQTKT+LGN EV+ VVD V E L YLE HP I+ K ++A +A
Sbjct: 335 VISVKVPNPQFEGQTKTKLGNLEVKGVVDNIVSEGLHIYLEEHPAEARLIVEKGITASRA 394
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+K+ L SSLPGKL+DCS P+++EI+IVEGDSAGGSAK GRDRR+Q
Sbjct: 395 REAAKRARELTRRKNALEVSSLPGKLSDCSEKDPKKTEIYIVEGDSAGGSAKSGRDRRYQ 454
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + ++ I+ +I A G GV E F LRY+KIII+TDADV
Sbjct: 455 AILPLRGKILNVEKARVDRVLNSDTIRMMITAFGTGVS-EGFDISKLRYYKIIIMTDADV 513
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L EG +Y+ PPLY+V +G+Q Y YDD E K+
Sbjct: 514 DGAHIRTLLLTFFYRYMKPLITEGHVYIAKPPLYQVRKGRQKYYTYDDDEQNKLLDEIGR 573
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLW TT+NPEQR++ ++ + DA EA+ +F+ LMG +V+ R++
Sbjct: 574 DGC-TIQRYKGLGEMDPEQLWNTTMNPEQRVMMRVELTDAVEADRLFTILMGDKVEPRRK 632
Query: 540 LI-QNAANLVNLD 551
I +NA N+ NLD
Sbjct: 633 FIEENAMNVTNLD 645
>gi|21228521|ref|NP_634443.1| DNA gyrase subunit B [Methanosarcina mazei Go1]
gi|20907008|gb|AAM32115.1| DNA gyrase, subunit B [Methanosarcina mazei Go1]
Length = 634
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/553 (51%), Positives = 380/553 (68%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE EV V RDG +Y Q+Y RGKP
Sbjct: 94 VVMTILHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWTEVEVSRDGKKYFQRYIRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D GT+ F PD ++F T F ++ + R+RELAFLN L I L
Sbjct: 152 ----ESDVREIGTSDTTGTKTTFKPDTKIFETT-DFQYDILLNRLRELAFLNRGLIINL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
K+ PE Q + ++GG+ E+V++LN K+PLH+ + F + D + +++A+Q+ ++
Sbjct: 206 KDLRSPE-GQAETFNYSGGIIEFVEYLNKKKQPLHEKPIYFERQRDDMVVEIAMQY-TNG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTHI G K +LTR N K +K K+ D L+G+ VREGLT
Sbjct: 264 YTENVYSFANNINTHEGGTHIIGFKTALTRVANDYIKANKLSKE-DEKLTGDDVREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ P+FEGQTKT+LGN EV+ +VD V + L EY E +P V + IL K+L A +A
Sbjct: 323 IISVKLMEPQFEGQTKTKLGNSEVKGIVDSLVTDGLAEYFEENPKVANIILDKALLAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L S+LPGKLADCS+ P E EI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 383 REAAKKARELTRRKSALEVSTLPGKLADCSNKNPAECEIYIVEGDSAGGSAKQGRDRSFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ A + KN E+ +LI A+G GV EDF E RYHKIII+TDADV
Sbjct: 443 AILPLRGKILNVEKSRLAKILKNNEVISLITAIGTGV-SEDFDLENARYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT F+RY + L D G +Y+ PPLYK+++GK Y Y D EL
Sbjct: 502 DGAHIRTLLLTLFFRYMRHLIDAGYVYIAQPPLYKIKKGKMDYYAYSDKELADKLKELGE 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLWETT++PE R L Q+ +EDA A+ +F LMG V+ R+
Sbjct: 562 KGV-AIQRYKGLGEMNPGQLWETTMDPESRTLLQVTLEDAIRADEIFRVLMGDEVEPRRN 620
Query: 540 LIQ-NAANLVNLD 551
I+ +A +V+LD
Sbjct: 621 FIETHAKEVVDLD 633
>gi|261417505|ref|YP_003251187.1| DNA gyrase subunit B [Geobacillus sp. Y412MC61]
gi|261373962|gb|ACX76705.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC61]
Length = 640
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/556 (51%), Positives = 380/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q+Y RG+P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQRYERGEP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 156 CTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITLT 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +++ALQ+
Sbjct: 212 DERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAVEIALQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+GE VREG
Sbjct: 265 NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDANLTGEDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I+ K + A
Sbjct: 325 LTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKIVEKGMMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 385 ARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYHK+II+TD
Sbjct: 445 HFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYHKVIIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F LMG +V+
Sbjct: 564 LPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEILMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENARYVKNLD 639
>gi|56418540|ref|YP_145858.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|448236315|ref|YP_007400373.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
gi|56378382|dbj|BAD74290.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426]
gi|445205157|gb|AGE20622.1| DNA gyrase subunit beta [Geobacillus sp. GHH01]
Length = 638
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/556 (51%), Positives = 380/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q+Y RG+P
Sbjct: 96 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQRYERGEP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 154 CTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITLT 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +++ALQ+
Sbjct: 210 DERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAVEIALQY- 262
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+GE VREG
Sbjct: 263 NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDTNLTGEDVREG 322
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I+ K + A
Sbjct: 323 LTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKIVEKGMMA 382
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 383 ARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGSAKQGRDR 442
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYHK+II+TD
Sbjct: 443 HFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYHKVIIMTD 501
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 502 ADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAE 561
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F LMG +V+
Sbjct: 562 LPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEILMGDKVEP 621
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 622 RRQFIEENARYVKNLD 637
>gi|312109156|ref|YP_003987472.1| DNA gyrase subunit beta [Geobacillus sp. Y4.1MC1]
gi|336233551|ref|YP_004586167.1| DNA gyrase subunit B [Geobacillus thermoglucosidasius C56-YS93]
gi|423718277|ref|ZP_17692459.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
gi|311214257|gb|ADP72861.1| DNA gyrase, B subunit [Geobacillus sp. Y4.1MC1]
gi|335360406|gb|AEH46086.1| DNA gyrase, B subunit [Geobacillus thermoglucosidasius C56-YS93]
gi|383367207|gb|EID44490.1| DNA gyrase, B subunit [Geobacillus thermoglucosidans TNO-09.020]
Length = 640
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 294/556 (52%), Positives = 383/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSEELEVYVHRDGKIHYQKYQRGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V DR GT + F PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 156 CTDLQV----VGETDRTGTTVHFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
ED E N+ NEY + GG++ YV+ LN ++ LH+ ++G R DGI +++A Q+
Sbjct: 211 -EDKRVE-NRKNEYCYEGGIQSYVKHLNRTREVLHEEPIYIIGER---DGIYVEIAFQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+YS + + N+I T +GGTH G K +LTR +N +K + KD D +L+GE VREG
Sbjct: 265 NDSYSSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKDNDPNLTGEDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P P+FEGQTKT+LGN + R V D E +L +P + I+ K + A
Sbjct: 325 LTAIVSIKHPAPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKIVEKGMMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 385 ARARLAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKIII+TD
Sbjct: 445 HFQAILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDITKARYHKIIIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + G +Y+ PPLYK+E+ KQV+Y Y+D +L+K+ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRYMREFIERGYVYIAQPPLYKIEQDKQVRYAYNDRQLEKILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P N +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA EA+ F LMG +V+
Sbjct: 564 LPENPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIEADETFEILMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENARYVKNLD 639
>gi|251794042|ref|YP_003008773.1| DNA gyrase subunit beta [Paenibacillus sp. JDR-2]
gi|247541668|gb|ACS98686.1| DNA gyrase, B subunit [Paenibacillus sp. JDR-2]
Length = 635
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 377/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE + VTV G Y Q+Y RG P
Sbjct: 94 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEHVTVTVKLHGNVYQQEYRRGVP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D GT ++F PD ++FT +++ T+ RIRELAFLN L I L
Sbjct: 152 ----QYDVKIIGESDETGTTVKFKPDPEIFTDTTVYEYETLQSRIRELAFLNKGLEIEL- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D N + + GG+ E+V+ LN +K+ +H+ + D I ++++LQ+ +D
Sbjct: 207 ---IDERTGTSNSFKYDGGIIEFVKHLNRNKEVMHEEPIYVEGSKDHIQVEVSLQY-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD D + SG+ VREGLT
Sbjct: 263 YTENIHSFANNINTHEGGTHESGFKSALTRIINDYARKTGLIKDNDSNFSGDDVREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V I+ K L A +A
Sbjct: 323 IISVKIPEPQFEGQTKTKLGNSEVRGIVESFFAEKLQEFLDENPSVSRKIVEKGLQAARA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 383 REAARKARELTRRKSALEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRHFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVER + N EI+ +I ALG G+ G+DF RYHK+II+TDADV
Sbjct: 443 AILPLRGKILNVERARLDRILGNAEIRAIITALGTGI-GDDFDLAKARYHKVIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFF+RY + + + G IY+ PPL+K+ER K ++Y + E +++ + F
Sbjct: 502 DGAHIRTLMLTFFFRYMRKIIEAGYIYIAQPPLFKIERNKVIRYAQSEKEREEIIAEFGE 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM QLWETT++PE R + Q+ IEDA EA+V+F +LMG V+ R++
Sbjct: 562 GAKVNVQRYKGLGEMNATQLWETTMDPESRTMLQVSIEDAIEADVIFDTLMGDNVEPRRD 621
Query: 540 LIQN-AANLVNLD 551
IQ A ++ NLD
Sbjct: 622 FIQQFAKDVKNLD 634
>gi|297616219|ref|YP_003701378.1| DNA gyrase subunit beta [Syntrophothermus lipocalidus DSM 12680]
gi|297144056|gb|ADI00813.1| DNA gyrase, B subunit [Syntrophothermus lipocalidus DSM 12680]
Length = 636
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 385/553 (69%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T LH+G KFGGS GY++SGGLHGVGLSVVNALS LEV V RDG YHQ+Y RGKP
Sbjct: 97 VILTTLHSGAKFGGS--GYTISGGLHGVGLSVVNALSRWLEVEVARDGQLYHQRYERGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + GT+I F PD ++F I F I R+REL++LN I L
Sbjct: 155 VTPLAV----TGACQTTGTKITFSPDPEIFE-EICFSAEIIGQRLRELSYLNQGTRIVL- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D + EY+ GG+ ++V++L+ +++PL + + FR +G +++A+Q+ +
Sbjct: 209 ---CDKRTGRDVEYYHTGGIRDFVKYLSKNREPLSPEPIYFRIGKEGTVVEVAIQYNT-G 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++T+L YAN+I T +GGTH G K LTR +N KK +K+ + +L GE +REG+T
Sbjct: 265 YTETLLSYANNIHTQEGGTHELGFKNGLTRVVNEYAKKQGMLKENEGNLLGEDIREGMTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV V +P+FEGQTKT+LGN +R +V+ +V +++ + + +P + I+ K+++A +A
Sbjct: 325 VISVLVQDPQFEGQTKTKLGNAFIRSLVEGAVSDFVGAFFDENPSLAKKIVEKAIAARRA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K++L S+SLPGKLADCS P SE+++VEGDSAGGSAKQGRDR FQ
Sbjct: 385 REAARKARELTRRKNLLDSTSLPGKLADCSEKDPALSELYLVEGDSAGGSAKQGRDRNFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + NEEI+ LI A+G G+ GEDF RYH++II+TDADV
Sbjct: 445 AILPLRGKILNVEKARLDKVLSNEEIRALITAIGTGI-GEDFDINKARYHRLIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIR LLLTFFYRY + L + G +YV PPLY+++RGK+V Y Y+D EL++
Sbjct: 504 DGSHIRVLLLTFFYRYMRPLIEAGYVYVAQPPLYELKRGKEVHYIYNDRELQRFLEQ-QG 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y ++R+KGLGEM P QLWETT+NPE R L Q+ IEDA A+V+FSSLMG +V+ R+E
Sbjct: 563 NKKYGVKRYKGLGEMNPEQLWETTMNPENRTLLQVRIEDAIAADVIFSSLMGEKVEPRRE 622
Query: 540 LIQNAANLV-NLD 551
IQ A LV NLD
Sbjct: 623 FIQENARLVTNLD 635
>gi|193215259|ref|YP_001996458.1| DNA gyrase subunit B [Chloroherpeton thalassium ATCC 35110]
gi|193088736|gb|ACF14011.1| DNA gyrase, B subunit [Chloroherpeton thalassium ATCC 35110]
Length = 644
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/551 (48%), Positives = 371/551 (67%), Gaps = 15/551 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+R+G + Q Y +G P
Sbjct: 101 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYREGKIFFQGYEKGIP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ + + GT+ F PD+ +F +F ++T+A R+RELA+LN LTI +
Sbjct: 159 KAPVSV----IGTTSENGTKTTFLPDESIFKNR-EFRYDTLADRMRELAYLNKNLTIVI- 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDA 179
D + +E+ F GG++E+V ++++ + K + + + F + DG +++A Q+ +D+
Sbjct: 213 ---EDERDGRRDEFHFKGGIQEFVTFMDSTRLKLIKEPIYFEGEKDGTVVEIAFQY-NDS 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + Y N+I T +GGTH+ G + +LTRTLN G+K+ K+ ISL+GE REGLT
Sbjct: 269 YQENAFSYVNNINTHEGGTHVTGFRKALTRTLNYYGQKNDLFKNLKISLTGEDFREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+VP P+FEGQTKT+LGN E + +V+ V E L EY+E HP+ + IL K +SA A
Sbjct: 329 ILSVKVPEPQFEGQTKTKLGNSETQSIVESIVNEKLAEYIEQHPNEVKIILEKVVSAAIA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A+DL R+KS L SSSLPGKLADCS PE E++IVEGDSAGGSAKQGRDRRFQ
Sbjct: 389 RDAARKAKDLTRRKSALESSSLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRRFQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ LI ALG + ++F LRY KII++TDADV
Sbjct: 449 AILPLKGKILNVEKARLNKMLENEEIRTLIMALGTSIGEDEFDASRLRYGKIILMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+RY + L + G +++ PPLY ++ GKQ Y +DD E + F
Sbjct: 509 DGAHIRTLLLTFFFRYMRGLVEGGRVFIAQPPLYLIKSGKQQWYAWDDDERDDILKQFEV 568
Query: 480 NAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
Y IQR+KGLGEM QLW TT++PE+R L + IE+A EA+ +FS+LMG +V+ R
Sbjct: 569 KGKENYGIQRYKGLGEMNADQLWSTTMDPEKRTLLMVTIENAMEADKIFSTLMGDQVEPR 628
Query: 538 KELIQNAANLV 548
+ I+ A V
Sbjct: 629 RAFIETNAKYV 639
>gi|297528381|ref|YP_003669656.1| DNA gyrase subunit beta [Geobacillus sp. C56-T3]
gi|319765163|ref|YP_004130664.1| DNA gyrase B subunit [Geobacillus sp. Y412MC52]
gi|297251633|gb|ADI25079.1| DNA gyrase, B subunit [Geobacillus sp. C56-T3]
gi|317110029|gb|ADU92521.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC52]
Length = 638
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/556 (51%), Positives = 380/556 (68%), Gaps = 19/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+RDG ++Q+Y RG+P
Sbjct: 96 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVYRDGKIHYQRYERGEP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + DR GT RF PD ++FT +FD+ T+A R+RELAFLN L I L
Sbjct: 154 CTDLQV----IGETDRTGTTTRFKPDPEIFTETTEFDYETLATRLRELAFLNRGLKITLT 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D KN EY + GG+ YV+ LN ++ LH+ + G R DGI +++ALQ+
Sbjct: 210 DERVDSRKN---EYVYEGGIRSYVRHLNRTREVLHEEPIYIAGER---DGIAVEIALQY- 262
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ + + N+I T +GGTH G K +LTR +N +K + K+ D +L+GE VREG
Sbjct: 263 NDGYTSNIYSFVNNIHTHEGGTHESGFKMALTRIINDYARKQQIFKENDANLTGEDVREG 322
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+S++ P+P+FEGQTKT+LGN + R V D E +L +P + I+ K + A
Sbjct: 323 LTAIVSIKHPSPQFEGQTKTKLGNSDARTVTDAVFSEQFETFLLENPTIARKIVEKGMMA 382
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A LAAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 383 ARARLAAKKARELTRRKSALEISNLPGKLADCSSRDPSISELYVVEGDSAGGSAKQGRDR 442
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++ +I ALG G+ GE+F RYHK+II+TD
Sbjct: 443 HFQAILPLRGKILNVEKARLDKILSNNEVRAIITALGTGI-GEEFDISKARYHKVIIMTD 501
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L + G IY+ PPLYK+E+GKQV+Y Y+D +L+K+ +
Sbjct: 502 ADVDGAHIRTLLLTFFYRYMRELIEHGYIYIAQPPLYKIEQGKQVRYAYNDRQLEKILAE 561
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P +IQR+KGLGEM P QLWETT+NPE R L Q+ ++DA +A+ F LMG +V+
Sbjct: 562 LPDQPKPTIQRYKGLGEMNPEQLWETTMNPETRTLLQVSLQDAIDADETFEILMGDKVEP 621
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 622 RRQFIEENARYVKNLD 637
>gi|373859274|ref|ZP_09602004.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
gi|372450943|gb|EHP24424.1| DNA gyrase, B subunit [Bacillus sp. 1NLA3E]
Length = 642
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/553 (52%), Positives = 381/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG Y+Q + RG P
Sbjct: 100 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVYVHRDGKIYYQVFERGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D GT I F PD +FT +++D++T+A R+RELAFLN + I +
Sbjct: 158 QADLAV----VGETDHTGTTIHFIPDATIFTETLEYDYDTLATRLRELAFLNKNIKITI- 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
ED E N+ NEY + GG++ YV+ LN K +H+ F + DGITID+ALQ+ +++
Sbjct: 213 -EDKRVE-NKKNEYIYEGGIKSYVEHLNRTKDVVHEEPIFIEGEKDGITIDVALQY-NES 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N +K+ +K+ D +LSGE VREGLT
Sbjct: 270 YTSNIYSFANNIHTYEGGTHEFGFKTALTRVINDYARKNGLIKENDTNLSGEDVREGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN EVR + D E+ ++L P V ++ K L A +A
Sbjct: 330 IISIKHPDPQFEGQTKTKLGNSEVRTITDTIFSEHFEKFLLEDPGVARKVVEKGLMAARA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 390 RLAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHK++I+TDADV
Sbjct: 450 AILPLRGKILNVEKARLDKILSNNEVRAMITAIGTGI-GEDFDIARARYHKVVIMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+++Y Y+D EL++V + P+
Sbjct: 509 DGAHIRTLLLTFFYRYMRQILEAGYVYIAQPPLYKVQQGKRIEYAYNDKELERVFAELPN 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLWETT++P R + Q+ +EDA EA+ F LMG +V+ R+
Sbjct: 569 SPKPNIQRYKGLGEMNPTQLWETTMDPSTRTMLQVSLEDAIEADETFEMLMGDKVEPRRN 628
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 629 FIEANAQYVKNLD 641
>gi|295106380|emb|CBL03923.1| DNA gyrase subunit B [Gordonibacter pamelaeae 7-10-1-b]
Length = 656
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 278/570 (48%), Positives = 381/570 (66%), Gaps = 25/570 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+SVVNALS +EV+V+++G++Y + GK
Sbjct: 97 VVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSSRVEVSVFKEGVQYDISFDHGK- 153
Query: 61 VTTLTCHVLPVDSKDRQG--TRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
T L K R+G T + FWPD +FT +D++T+A R RE+AFLN L I
Sbjct: 154 ----TAEKLREVGKVRRGNGTTVTFWPDPTIFTDTTVYDYDTLASRFREMAFLNKGLKII 209
Query: 119 LRKEDSDP-------EKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITID 170
L E +P E F +AGG+ ++V++LN K+ L+ + F + D T++
Sbjct: 210 LHDERVNPGSTLSDLAPEPRTEVFQYAGGIVDFVKFLNEGKETLNKPIYFEAENDDGTVE 269
Query: 171 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG 230
+A+QW S +++++ +AN+I T +GGTH++G K ++TRT+N + +K+KD +LSG
Sbjct: 270 VAMQWSSSYSTNSVMAFANNINTHEGGTHLDGFKQAVTRTINEYARAKGILKEKDSNLSG 329
Query: 231 EHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSIL 290
+ REG IISV++ +P+FEGQTKT+LGN E+R +V +V + L EYLE +P I+
Sbjct: 330 DDTREGCAAIISVKLHDPQFEGQTKTKLGNTEIRPLVQNAVTQGLAEYLEENPKPAKRII 389
Query: 291 SKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSA 350
K+ ALKA AA++AR++ R+K VL S +LPGKLADCSS TP +SEIFIVEGDSAGGSA
Sbjct: 390 DKATQALKAREAARKAREMTRRKGVLDSFALPGKLADCSSKTPADSEIFIVEGDSAGGSA 449
Query: 351 KQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHK 410
KQ RDR+ QAILPLRGKILNVER ++ I +LI A+G + G+DF + RYH+
Sbjct: 450 KQARDRKTQAILPLRGKILNVERAGLHRSLSSDTISSLITAIGTNI-GDDFDADQARYHR 508
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY----KVERGKQVQ-YCY 465
III+TDADVDGAHIR LLLTFFYRY L + G IY+ PP++ K R +++ Y Y
Sbjct: 509 IIIMTDADVDGAHIRCLLLTFFYRYMPELINRGYIYIAQPPIFGLKKKNSRSPKIERYIY 568
Query: 466 DDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
D++ L V + + + + +QR+KGLGEM P QLWETT+ PE R L Q+ I+DAAEA V
Sbjct: 569 DESALGSVLAEYDNPDKFDVQRYKGLGEMDPDQLWETTMEPETRTLLQVNIDDAAEAERV 628
Query: 526 FSSLMGARVDTRKELIQNAANLVNLDHLDI 555
S LMG +V+ RKE IQ A V LDI
Sbjct: 629 VSELMGDQVEPRKEFIQKHARDVRF--LDI 656
>gi|407796859|ref|ZP_11143810.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
gi|407018757|gb|EKE31478.1| DNA gyrase subunit B [Salimicrobium sp. MJ3]
Length = 643
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 376/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V RDG YHQ + G P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSDYLEVHVHRDGKLYHQDFRHGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +D+ D+ GT+I F PD ++F ++D T+ R+RELAFLN LTI +
Sbjct: 158 ----QKDVEEIDTTDKTGTQIHFKPDPEIFKEGQEYDFETLTTRLRELAFLNRGLTITV- 212
Query: 121 KEDSDPEK-NQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
ED E N E+++ GG+ YV+ LN+ ++ LH+ + + DGI+I+LALQ+ +D
Sbjct: 213 -EDKREEHGNGKKEFYYEGGIISYVEHLNSSREVLHEPIYAEAEQDGISIELALQY-NDG 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + YAN+I T +GGTH G K LTR +N +K+ ++ D +L+G+ VREGLT
Sbjct: 271 FASNIYSYANNIHTYEGGTHESGFKTGLTRVINDYARKNSMFRENDPNLTGDDVREGLTV 330
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R V D E +++L +P+V I+ K L A +A
Sbjct: 331 IISIKHPDPQFEGQTKTKLGNSEARTVTDALFSENFSKFLLENPNVAKIIVEKGLMASRA 390
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKL+DC+S P ESE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 391 RMAAKKARELTRRKSALEISNLPGKLSDCASKDPSESELYIVEGDSAGGSAKQGRDRHFQ 450
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I ALG GV GE+F RYHK++I+TDADV
Sbjct: 451 AILPLRGKILNVEKARLDKILSNNEVRTMITALGSGV-GEEFDVSKARYHKVVIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L ++G +Y+ PPLY++++ K+ Y + D EL++ + P+
Sbjct: 510 DGAHIRTLLLTFFYRYMRPLLEDGYVYIAQPPLYQIKQNKKEYYTFSDQELEEKLAEIPA 569
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT+NPE R + Q+ +EDA A+ FS LMG V+ R+
Sbjct: 570 TPKPVIQRYKGLGEMNPEQLWETTMNPEGRTMLQVTLEDAIGADETFSMLMGDAVEPRRN 629
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 630 FIQENARYVQNLD 642
>gi|344995338|ref|YP_004797681.1| DNA gyrase subunit B [Caldicellulosiruptor lactoaceticus 6A]
gi|343963557|gb|AEM72704.1| DNA gyrase, B subunit [Caldicellulosiruptor lactoaceticus 6A]
Length = 637
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/557 (49%), Positives = 385/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y RGKP
Sbjct: 98 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSRYLEVEVYRDGKVYYQRYERGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
TC + + + GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 156 ----TCELKVIGETNSTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFV 210
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R++++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 211 DEREKNAKPIELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAIQYT 265
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L GE +R+G
Sbjct: 266 ED-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K++ A
Sbjct: 324 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLAAFLEENPDVSKKIIDKAILA 383
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 384 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHKIII+
Sbjct: 444 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKIIIMA 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++ EL+++
Sbjct: 503 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEKELQRILQ 562
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+
Sbjct: 563 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTILMGDKVE 619
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 620 PRREFIEKNAKYVRNLD 636
>gi|410723309|ref|ZP_11362553.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
gi|410603355|gb|EKQ57790.1| DNA gyrase, B subunit [Clostridium sp. Maddingley MBC34-26]
Length = 635
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/557 (50%), Positives = 387/557 (69%), Gaps = 23/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG GY VSGGLHGVG SVVNALSE VTV RDG + QKYSRGK
Sbjct: 95 VIMTILHAGGKFGGE--GYKVSGGLHGVGASVVNALSEECTVTVKRDGHIWQQKYSRGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ LT + D GT F PD ++F I +D ++ R+RELAFLN + I L
Sbjct: 153 LNELT----QIGDSDETGTETYFKPDVEIFDETI-YDFEILSQRLRELAFLNKGIYIKLI 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+ D E+ + + GG++ +V +LN +K PLH+ + G + D +++++ALQ+
Sbjct: 208 DKRYDKEE----VFHYEGGIKSFVSYLNRNKVPLHEEPIYIEGLK---DNVSVEIALQY- 259
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+ +REG
Sbjct: 260 NDGYTENIFTFANNIDTVEGGTHLIGFKTALTRVFNDYAKKFGHIKENDKNFTGDDIREG 319
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV++ P+FEGQTKT+LGN EVR +VD V E + +LE +P++ I+ K+L A
Sbjct: 320 LTAVISVKIEEPQFEGQTKTKLGNSEVRGIVDSIVGENIGVFLEENPNIGKMIVDKALMA 379
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R KSVL S+LPGKLADCSS P E EI+IVEGDSAGGSAKQGR+R
Sbjct: 380 ARARDAARKARELTR-KSVLERSTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQGRNR 438
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKILNVE++ + + I++++ A G G+ G DF E +RY++III+TD
Sbjct: 439 KFQAILPLRGKILNVEKQRLDRILNADTIRSMVTAFGAGI-GNDFDVEKIRYNRIIIMTD 497
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L D+G +Y+ PPLYKV + K+ Y Y D+EL+ V S
Sbjct: 498 ADVDGAHIRTLLLTFFYRYMRQLVDDGHVYIAQPPLYKVSKSKKDYYAYSDSELENVLSE 557
Query: 477 FPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ IQR+KGLGEM QLW+TT++PE+R+L ++ IEDA A+ +F+ LMG +V+
Sbjct: 558 LGGKDNSTDIQRYKGLGEMNASQLWDTTMDPEKRILLKVNIEDAMAADEIFTILMGEKVE 617
Query: 536 TRKELI-QNAANLVNLD 551
RKE I QNA N+VNLD
Sbjct: 618 PRKEFITQNAKNVVNLD 634
>gi|375092559|ref|ZP_09738837.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
gi|374560728|gb|EHR32085.1| DNA gyrase, B subunit [Helcococcus kunzii ATCC 51366]
Length = 637
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/555 (49%), Positives = 383/555 (69%), Gaps = 18/555 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF S Y+ SGGLHGVG+SVVNALS L + RDG Y Q++S+GKP
Sbjct: 95 VLTILHAGGKF--DSEAYAFSGGLHGVGVSVVNALSTKLVAEIRRDGYRYTQEFSQGKPK 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L H + D GT IRFWPD +VF T + F+ T+ R E+ FLN L I L
Sbjct: 153 TKLQKH----EETDETGTSIRFWPDGEVFET-LDFNRATLEKRFEEMTFLNEGLKITLID 207
Query: 122 EDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
DP ++ E F A GGL +V++LN + LHD V+ ++ VDG +D A+Q+ +D+
Sbjct: 208 YREDP---KFEEDFIAEGGLSTFVKFLNKKRTALHDDVIHYKGMVDGSEVDFAMQY-TDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN++ T +GGTH+ G ++ LT+T+N+ ++ +K+KD + SGE +REG+T
Sbjct: 264 YSENVLSFANTVLTGEGGTHLTGFRSGLTKTINNYAREYDFLKEKDENYSGEDIREGITA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
II+V++ NP+FEGQTK +LG+ E+R +VD V E L+EYLE +P + I+ K SA +A
Sbjct: 324 IIAVKLSNPQFEGQTKGKLGSSEMRGIVDTFVSEKLSEYLEENPKIAKKIMDKCESARRA 383
Query: 300 ALAAKRARDLVRQK-SVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
+A+K+ARDL R K S+L S++LPGKLA+C ST E+E+FIVEGDSAGGSAK GRD ++
Sbjct: 384 RVASKKARDLSRNKNSLLSSTTLPGKLAECQSTDITENELFIVEGDSAGGSAKLGRDNKY 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILP+RGKILNVE+ A + +EEI+ LI A G G+ GEDF + LRY KII++TDAD
Sbjct: 444 QAILPIRGKILNVEKARIAKVLSSEEIKALITAFGTGI-GEDFDIKNLRYGKIILMTDAD 502
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHI TLLLTF YRY + L + G +++ PPL+KV +GK+ +Y YD+ ELK + +
Sbjct: 503 VDGAHIDTLLLTFLYRYMRPLIENGNVFIAQPPLFKVTQGKKERYVYDEKELKSIIENIK 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA-EANVVFSSLMGARVDTR 537
Y I R+KGLGEM QLWETT++PE R+L Q+ I++ + + F++LMG +V+ R
Sbjct: 563 GEN-YKINRYKGLGEMNAEQLWETTMHPEHRVLIQVKIDNESITLDDTFNTLMGDKVEPR 621
Query: 538 KELI-QNAANLVNLD 551
+E I +NA N+D
Sbjct: 622 REFIEENAKFATNID 636
>gi|257789784|ref|YP_003180390.1| DNA gyrase subunit B [Eggerthella lenta DSM 2243]
gi|317489247|ref|ZP_07947764.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325832276|ref|ZP_08165275.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
gi|257473681|gb|ACV54001.1| DNA gyrase, B subunit [Eggerthella lenta DSM 2243]
gi|316911648|gb|EFV33240.1| DNA gyrase, subunit B [Eggerthella sp. 1_3_56FAA]
gi|325486112|gb|EGC88566.1| DNA gyrase, B subunit [Eggerthella sp. HGA1]
Length = 648
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/562 (49%), Positives = 377/562 (67%), Gaps = 15/562 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+SVVNALS +EV V ++G EY + GK
Sbjct: 95 VVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSSRVEVQVRKEGKEYFIGFDHGKT 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V P +K GT + FWPD ++FT +D +T+A R RE+AFLN L I L
Sbjct: 153 SEKLR-EVGP--TKRGNGTTVSFWPDPEIFTETTVYDFDTLANRFREMAFLNKGLKIVLY 209
Query: 121 KED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
E +D + E F +AGG+ ++V++LN K+ L+ + F + D T+++A+QW +
Sbjct: 210 DERVTDADGKPRTEVFQYAGGIVDFVKFLNEGKETLNKPIYFEAENDDGTVEVAMQWSTS 269
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+++++ +AN+I T +GGTH++G K ++TRT+N + +K+KD +LSG+ REG
Sbjct: 270 YSTNSVMAFANNINTHEGGTHLDGFKQAVTRTINEYARSKGILKEKDSNLSGDDTREGCA 329
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+SV++ +P+FEGQTKT+LGN E+R +V +V + L EYLE +P I+ K+ ALK
Sbjct: 330 AIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAVTQGLAEYLEENPTPAKRIIGKATQALK 389
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+K VL S +LPGKLADCSS TPE SE+FIVEGDSAGGSAKQ RDR+
Sbjct: 390 AREAARKAREMTRRKGVLDSFALPGKLADCSSKTPENSELFIVEGDSAGGSAKQARDRKT 449
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVER ++ I +LI A+G + G+DF + RYH+III+TDAD
Sbjct: 450 QAILPLRGKILNVERAGLHRSLSSDTISSLITAIGTNI-GDDFDADQSRYHRIIIMTDAD 508
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY----KVERGKQVQ-YCYDDAELKKV 473
VDGAHIR LLLTFFYRY L + G IY+ PP++ K R +++ Y YD++ L V
Sbjct: 509 VDGAHIRILLLTFFYRYMPELINRGYIYIAQPPIFGLKKKNSRSPKIERYIYDESSLGSV 568
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ + + +QR+KGLGEM P QLWETT+ P R L Q+ I+DAAEA V S LMG +
Sbjct: 569 LAEYDDPNKFDVQRYKGLGEMDPDQLWETTMEPATRTLLQVSIDDAAEAERVVSDLMGDQ 628
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V+ RKE IQ A V LDI
Sbjct: 629 VEPRKEFIQKHARDVRF--LDI 648
>gi|354559350|ref|ZP_08978600.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
gi|353542939|gb|EHC12399.1| DNA gyrase, B subunit [Desulfitobacterium metallireducens DSM
15288]
Length = 644
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/551 (50%), Positives = 383/551 (69%), Gaps = 15/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF ++S Y VSGGLHGVGLSVVNALS+ L V V +DG YHQ+Y RGK +T
Sbjct: 106 LTVLHAGGKF--NNSAYKVSGGLHGVGLSVVNALSKWLYVDVKKDGKMYHQEYERGKTMT 163
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
LT + + GT+I F PD ++F F+ + +A R+REL+FLN K++I L
Sbjct: 164 ELTI----IGESEGSGTQITFAPDPEIFEETTVFEFDILAHRLRELSFLNKKVSITL--- 216
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
D K++ Y+ GG+ ++V+++N +K LH + F D + +++ +Q+ +D+Y+
Sbjct: 217 -IDERKDEREVYYHTGGIIDFVKYINKNKDVLHPQPIYFESFKDNVEVEIGIQY-NDSYT 274
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G KA+LTR +N +K+ +K D +LSG+ +REG+T +I
Sbjct: 275 ENLFSYANNINTQEGGTHEAGFKAALTRVVNDYARKNNIIKANDANLSGDDIREGMTAVI 334
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP P+FEGQTKT+LGN E+R +VD V E L +LE +P V ++ KSL AL+A
Sbjct: 335 SVKVPEPQFEGQTKTKLGNSEIRSIVDSIVGEGLNIFLEENPAVGKKVIEKSLQALRARE 394
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L SSLPGKLADCS P+ E+++VEGDSAGGSAKQGRDRRFQAI
Sbjct: 395 AARKARELTRRKSALEVSSLPGKLADCSWKEPDLCEMYLVEGDSAGGSAKQGRDRRFQAI 454
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + N EI+ +I A+G G+ +DF + RYHK+II+TDADVDG
Sbjct: 455 LPLRGKILNVEKARLDRILGNAEIRAMITAMGTGI-SDDFDLDKARYHKLIIMTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIR LLLTFFYR+ K L D G +Y+ PPLY+V++G+ V Y Y D EL K +
Sbjct: 514 AHIRILLLTFFYRFMKPLIDNGYVYIAQPPLYQVKKGRDVSYQYTDVELSKALDRVGRDK 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE-L 540
IQR+KGLGEM P QLWETT++P +R + Q+ ++DA A+ +F+ LMG +V+ R+E +
Sbjct: 574 AV-IQRYKGLGEMNPEQLWETTMDPAKRTILQVTMDDAMIADELFTKLMGDKVEPRREFI 632
Query: 541 IQNAANLVNLD 551
I+ A ++ NLD
Sbjct: 633 IKYAKDVRNLD 643
>gi|302870737|ref|YP_003839373.1| DNA gyrase subunit B [Caldicellulosiruptor obsidiansis OB47]
gi|302573596|gb|ADL41387.1| DNA gyrase, B subunit [Caldicellulosiruptor obsidiansis OB47]
Length = 638
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/557 (49%), Positives = 386/557 (69%), Gaps = 24/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF + Y VSGGLHGVG SVVNALS LEV V+RDG Y+Q+Y +GKP
Sbjct: 99 VVFTVLHAGGKF--NERVYKVSGGLHGVGASVVNALSCYLEVEVYRDGKVYYQRYEKGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V C + + + D+ GT++ F PD ++F T I+FD + I R+RELAFLN + I
Sbjct: 157 V----CELKVIGTTDKTGTKVTFLPDDEIFET-IEFDGDVILQRLRELAFLNKGIRIVFL 211
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R+++ P + +Y+ GG+ E+V++LN +K+ LH + + + + I I++A+Q+
Sbjct: 212 DEREKNPKPVELKYD-----GGIAEFVKFLNRNKEVLHQEPIYIEGEKNDILIEVAVQYT 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
D + + + +AN+I TIDGGTH+ G K ++T+ +N KK +K D L GE +R+G
Sbjct: 267 DD-FGENIYSFANNIATIDGGTHLIGFKTAVTKAVNEYAKKYNFIKG-DTQLLGEDIRDG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV++ P+FEGQTKT+LGN E R V+ V E L +LE +PDV I+ K++ A
Sbjct: 325 MTAIVSVKIHEPQFEGQTKTKLGNSEARWAVENLVSEKLATFLEENPDVSKKIIDKAILA 384
Query: 297 LKAALAAKRARDLV-RQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
KA AK+AR+LV ++KS L SS+LPGKLADCS P + EIFIVEGDSAGGSAKQGRD
Sbjct: 385 AKAREEAKKARELVIKRKSALDSSNLPGKLADCSEKDPAKCEIFIVEGDSAGGSAKQGRD 444
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RR+QAILPL GK+LNVE+ + +Y N+++ LI+ALG+G+ G D + LRYHK+II+
Sbjct: 445 RRYQAILPLWGKMLNVEKASQDKIYSNDKLLPLIQALGVGI-GNDIDLKKLRYHKVIIMA 503
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFFYRY + L + G IY+ PPLYK+ +GKQV+Y Y++ EL+K+
Sbjct: 504 DADVDGSHIRTLLLTFFYRYMRPLIENGHIYIAQPPLYKITKGKQVRYAYNEKELQKILQ 563
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM +LWETT++P +R+L ++ +EDA A +F+ LMG +V+
Sbjct: 564 EMKDA---QVQRFKGLGEMNAQELWETTMDPARRILLRVELEDAVMAEEIFTILMGDKVE 620
Query: 536 TRKELIQ-NAANLVNLD 551
R+E I+ NA + NLD
Sbjct: 621 PRREFIEKNAKYVRNLD 637
>gi|435851213|ref|YP_007312799.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
gi|433661843|gb|AGB49269.1| DNA gyrase, B subunit [Methanomethylovorans hollandica DSM 15978]
Length = 634
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/553 (49%), Positives = 377/553 (68%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF SS Y VSGGLHGVG+SVVNALSE EV V RDG Y+Q+Y +G P
Sbjct: 94 VVMTILHAGGKFDKSS--YKVSGGLHGVGVSVVNALSEWTEVYVKRDGNLYYQRYEKGVP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + GT + F PDK + T + F +T+ R+REL+FLN L I +
Sbjct: 152 I----ADVQVFGKSEGTGTTVTFKPDKSILETTV-FIFDTLVTRLRELSFLNKGLKITIS 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+ E+ + +Y GG+ +V+ LN + LH DV+ F ++ +G +++A+Q+ +D+
Sbjct: 207 DRRTSEEEKEVFQY--EGGIISFVEHLNQKRNVLHKDVIYFEREKEGTIVEIAMQY-TDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++++ +AN+I T +GGTH+ G KA+LTR N KK+ K D LSGE +REGLT
Sbjct: 264 YNESVYSFANNINTHEGGTHLVGFKAALTRVANDYIKKNNLAKGDD-KLSGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
II+V++ P+FEGQTKT+LGN +V+ +V+ V E L E++E +P V ++IL K+L A +A
Sbjct: 323 IINVKLTEPQFEGQTKTKLGNSDVKGIVESMVSEGLAEFMEENPKVANAILQKALDAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+K+ L S+LPGKLADCS P + E+++VEGDSAGGSAKQGRDRRFQ
Sbjct: 383 REAAKKARELTRRKNALDISTLPGKLADCSEKDPSQCELYLVEGDSAGGSAKQGRDRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP RGKILNVE+ + + KN E+ +LI A+G G+ G+D+ RYH++II+TDADV
Sbjct: 443 AILPFRGKILNVEKARLSRILKNTEVLSLITAMGTGI-GDDYDISRARYHRVIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LT F+RY + L DEG +Y+ PPLY++++G+ Y Y D EL
Sbjct: 502 DGAHIRTLILTLFFRYMRPLIDEGYVYIAQPPLYRIKKGQAEHYVYSDRELNAKLKELGD 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLWETT+NPE R + Q+ +EDA A+ +FS LMG V+ RK
Sbjct: 562 KGI-NIQRYKGLGEMNPGQLWETTMNPETRTILQVTLEDAVVADEMFSILMGDEVEPRKN 620
Query: 540 LIQNAANLV-NLD 551
I A LV NLD
Sbjct: 621 FIMKNAKLVTNLD 633
>gi|410582430|ref|ZP_11319536.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
gi|410505250|gb|EKP94759.1| DNA gyrase subunit B [Thermaerobacter subterraneus DSM 13965]
Length = 635
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/555 (49%), Positives = 381/555 (68%), Gaps = 22/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF G + Y VSGGLHGVG+SVVNALSE LEV V R+G + Q+Y RG+P
Sbjct: 93 VVLTMLHAGGKFDGQA--YKVSGGLHGVGVSVVNALSEWLEVEVRREGRIHRQRYRRGQP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V+ + D GT +RF PD ++F +F ++ + GR+RE+A LN L I LR
Sbjct: 151 ETGL--EVVGTTAADDTGTYVRFKPDPEIFEET-EFKYDVVVGRLREIALLNSGLYIELR 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + + N + F GGL +V LN K+ LH + + ++ + DG+ +++ALQW + +
Sbjct: 208 DERT----GERNLFQFMGGLRSFVALLNRTKEALHPEPISYKAERDGVEVEMALQWTT-S 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y +T+ +AN+I T +GGTH G K +LTR +N +K+ +K+ D +L+G+ +REGLT
Sbjct: 263 YVETLYSFANTIHTHEGGTHEAGFKMALTRVVNDYARKANLLKNGDENLAGDDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++P P+FEGQTKT+LGN EVR VVD E L Y E +P V ++ K+++A++A
Sbjct: 323 VLSVKLPEPQFEGQTKTKLGNSEVRGVVDSVTGEALATYFEENPQVARRVVEKAITAMRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KS L ++LPGKL DC+ P +E+FIVEGDSAGGSAKQGRDRRFQ
Sbjct: 383 REAARKARELTRRKSALEVTALPGKLTDCTVRDPAMAELFIVEGDSAGGSAKQGRDRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPLRGKILNVE+ + ++EI+ LI A+G G+ G++F RYHKII++TDADV
Sbjct: 443 AVLPLRGKILNVEKARLDKILAHDEIRALITAIGTGI-GDEFDIHRARYHKIILMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL----KKVKS 475
DGAHIRTLLLTFF+RY + L + G +Y+ PPLY V +GK+ Y YDD +L ++V
Sbjct: 502 DGAHIRTLLLTFFFRYMRPLIEAGYVYIAQPPLYLVRQGKEEHYFYDDDQLEAFFRQVGK 561
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
P+ QRFKGLGEM QLWETT+NPE R L Q+ +EDA A+ +FS LMG+RV+
Sbjct: 562 RMPA------QRFKGLGEMNAEQLWETTMNPETRTLLQVTLEDAMAADQIFSILMGSRVE 615
Query: 536 TRKELIQNAANLVNL 550
R+E I+ A V
Sbjct: 616 PRREFIEQHARKVRF 630
>gi|281411537|ref|YP_003345616.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
gi|281372640|gb|ADA66202.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
Length = 636
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/563 (49%), Positives = 389/563 (69%), Gaps = 25/563 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKF S Y +SGGLHGVG+SVVNALSE LEV V RDG Y Q+Y RGKP
Sbjct: 91 VVFTVLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWLEVRVHRDGKIYRQRYERGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D+ GT +RF PD +F+ +FD + + R+RE+AFL P L I
Sbjct: 149 VTPVEV----IGETDKHGTIVRFKPDPLIFSET-EFDPDVLEHRLREIAFLVPGLKI--- 200
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV--------DGITIDLA 172
E D + + F GG+ EYV++LN KK HDV+ ++ D + +++A
Sbjct: 201 -EFEDRINGEKKTFKFDGGIVEYVKYLNRGKKVFHDVIYMKRTEKVQTKNGEDEVIVEIA 259
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
Q+ +D+YS+ ++ +AN+I+T+DGGTH+ K LTR +N GKK +K D S GE
Sbjct: 260 FQY-TDSYSEDIVSFANTIKTVDGGTHVTAFKTMLTRLMNEYGKKHGFLKGDD-SFQGED 317
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT ++SV V NPEFEGQTK++LGN EV++ +++ +++ L + + +P+++ +ILSK
Sbjct: 318 VREGLTAVVSVYVKNPEFEGQTKSKLGNEEVKEAINRVMRDELKKIFDANPELVKTILSK 377
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+S +A AA+RAR++VR+K+VL++++LPGKLADCSST E++E+FIVEGDSAGGSAKQ
Sbjct: 378 IMSTKQAREAARRAREMVRRKNVLQNTTLPGKLADCSSTDREKTELFIVEGDSAGGSAKQ 437
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQA+LP+RGKILNVE+ + KNE+I ++I A+G G+ G+DF + LRY +II
Sbjct: 438 ARDREFQAVLPIRGKILNVEKSSLDKLLKNEQISDIIVAVGTGI-GDDFDEGKLRYGRII 496
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DGAHIRTLLLT FYRY + L ++G +Y+ +PPLY+++ GK+ Y Y D EL +
Sbjct: 497 IMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIKAGKEEFYVYSDLELME 556
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
K + IQR+KGLGEM P QLWETT+NPE R + ++ IEDA EA+ +F LMG
Sbjct: 557 YKEKLQGKRI-EIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIEDAEEADRLFEILMGN 615
Query: 533 RVDTRKELIQNAANLVNLDHLDI 555
+R+E I+ A + + LDI
Sbjct: 616 DPSSRREFIERHA--LKVKELDI 636
>gi|374578727|ref|ZP_09651821.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
gi|374414809|gb|EHQ87244.1| DNA gyrase, B subunit [Desulfosporosinus youngiae DSM 17734]
Length = 644
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 270/551 (49%), Positives = 378/551 (68%), Gaps = 14/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKFGGS S Y VSGGLHGVGLSVVNALSE L V V + G Y Q+Y++GKP T
Sbjct: 105 LTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSEWLVVEVSKGGHVYRQEYAKGKPTT 164
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + + + + GT+I+F PD ++F + +D N +A R+REL+FLN +TI L
Sbjct: 165 EL----IKIRTNETSGTKIKFMPDSEIFEDTV-YDFNILAHRLRELSFLNKSITINL--- 216
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYS 181
+D N + +GG++++V +LN K LH + + D + +++ +Q+ +D+Y+
Sbjct: 217 -ADERSNVKETFLHSGGIQDFVIYLNKSKDCLHPLPIYIETTKDNVQVEVCIQY-NDSYA 274
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G K++LTR +N +K+ +K D +LSG+ +REGLT +I
Sbjct: 275 ENLFSYANNINTQEGGTHEAGFKSALTRVVNDYARKNNMLKATDSNLSGDDIREGLTAVI 334
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+P+FEGQTKT+LGN E+R +VD + E LT +LE +P + + KS+ A +A
Sbjct: 335 SVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLTIFLEENPAIARKFIDKSVQAARARD 394
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L +SLPGKLADCS P+ E++IVEGDSAGGSAKQGRDRRFQAI
Sbjct: 395 AARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYIVEGDSAGGSAKQGRDRRFQAI 454
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + N EI+ +I A+G G+ +DF RYHK+II+TDADVDG
Sbjct: 455 LPLRGKILNVEKARLDKILGNAEIRAMITAMGTGIS-DDFDIAKARYHKLIIMTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFFYRY + L + +Y+ PPL+K+++G+ +QY Y D EL +
Sbjct: 514 AHIRTLLLTFFYRYMRPLIENNYVYIAQPPLFKIKKGRDIQYVYSDVELTNTLEKIGRDK 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ IQR+KGLGEM P QLWETT++P R + ++ +EDA +FS LMG +V+ R++ I
Sbjct: 574 V-EIQRYKGLGEMNPDQLWETTMDPANRTILRVTMEDAMRTEEMFSVLMGDKVEPRRDFI 632
Query: 542 QN-AANLVNLD 551
A ++ NLD
Sbjct: 633 NRYAKDVRNLD 643
>gi|386712349|ref|YP_006178671.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
gi|384071904|emb|CCG43394.1| DNA gyrase subunit B [Halobacillus halophilus DSM 2266]
Length = 639
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/552 (50%), Positives = 373/552 (67%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++Q + RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSKLEVFVHRDGKIHYQAFHRGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GTRI+F PD+Q+FT ++++ T+A R RELAFLN LTI++
Sbjct: 156 EEDLKV----IGDTEITGTRIQFKPDEQIFTETVEYNFETLATRTRELAFLNRGLTISIE 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
+ +D E Y ++ GG+ YV+ LN ++ LH+ + D I+I++ALQ+ +D +
Sbjct: 212 DKRTDEEPVSY---YYEGGIRSYVEHLNRTREVLHEPFFIESEQDDISIEIALQY-NDGF 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + YAN+I T +GGTH G K LTR +N +K+ KD D +L+G+ VREGLT I
Sbjct: 268 ASNLYSYANNIHTYEGGTHESGFKTGLTRVINDYARKNNMFKDMDPNLTGDDVREGLTAI 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS++ P+P+FEGQTKT+LGN E R V D E +++L +P++ ++ K L A +A
Sbjct: 328 ISIKHPDPQFEGQTKTKLGNSEARTVTDALFSEGFSKFLFENPNMARIVVEKGLMASRAR 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR+L R+K+ L S+LPGKLADCSS P SEI++VEGDSAGGSAKQGRDR FQA
Sbjct: 388 MAAKKARELTRRKNALEVSNLPGKLADCSSKDPSISEIYVVEGDSAGGSAKQGRDRHFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKI+I+TDADVD
Sbjct: 448 ILPLRGKIINVEKARLDKILSNNEVRAIITALGTGI-GEDFDISKARYHKIVIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY + L + G IY+ PPLYK+++GK V Y Y D +L + + P++
Sbjct: 507 GAHIRTLLLTFFYRYMRPLIEHGYIYIAQPPLYKIQQGKAVYYTYSDKQLDTMLAELPNS 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM P QLWETT++PE R L Q+ +EDA A+ F LMG +V+ R+
Sbjct: 567 PKPGVQRYKGLGEMNPEQLWETTMDPETRTLLQVSLEDAIGADETFDILMGDKVEPRRNF 626
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 IEENAQYVQNLD 638
>gi|418324495|ref|ZP_12935732.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
gi|365225912|gb|EHM67148.1| DNA gyrase, B subunit [Staphylococcus pettenkoferi VCU012]
Length = 642
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 370/552 (67%), Gaps = 8/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V RD YHQ Y RG P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSERLEVYVHRDNKIYHQAYERGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ D GT IRF D ++FT +D+ T+ RI+ELAFLN ++I LR
Sbjct: 155 --QFDLEVVGETDDDNTGTEIRFKADPEIFTETTVYDYETLQQRIKELAFLNKGISITLR 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + E + N Y + GG++ YV+ LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 213 DERDEDEVREDN-YHYEGGIKSYVEMLNENKEPLHDEPIYIHQTKDDIEVEIALQYNS-G 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH EG K +L+R LNS G +SK +KD LSGE REGLT
Sbjct: 271 FATNLLTYANNIHTYEGGTHEEGFKRALSRILNSYGLQSKIIKDDKDKLSGEDTREGLTA 330
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ +L HP V I+ K + A +A
Sbjct: 331 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDKLFSAQFERFLYEHPQVGRVIVDKGIMASRA 390
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIFIVEGDSAGGS K+GRD Q
Sbjct: 391 RVAAKKAREVTRRKSALEVSSLPGKLADCSSKNPDESEIFIVEGDSAGGSTKEGRDSATQ 450
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE F+ RYHKIII+TDADV
Sbjct: 451 AILPLRGKILNVEKSRLDRILNNNEIRSMITAFGTGIGGE-FELSKARYHKIIIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ +GK+ Y ++D EL +K+
Sbjct: 510 DGAHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKLTQGKEKYYVFNDRELDNLKAELNP 569
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NP+ R + Q+ ++DA +A+ F LMG V+ R++
Sbjct: 570 TPKWSISRYKGLGEMNADQLWETTMNPDNRSMLQVTLDDAIDADQTFEMLMGDVVENRRQ 629
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 630 FIEDNAVYANLD 641
>gi|342216026|ref|ZP_08708673.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586916|gb|EGS30316.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 640
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/557 (49%), Positives = 387/557 (69%), Gaps = 20/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L TV RDG Y Q++S+G +
Sbjct: 96 VLTILHAGGKF--NNGAYKVSGGLHGVGVSVVNALSKHLIATVKRDGKIYQQEFSKGDTL 153
Query: 62 TTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
T L TC K+ GT+I F PD+++FT +F + +A R RE+AFLN + I
Sbjct: 154 TKLKEIGTC------GKEEHGTKISFCPDEEIFTETTEFSYEVLAKRFREMAFLNKGVKI 207
Query: 118 ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWC 176
+ +K Y+ + GG++ +V++LN K P+H V + + V +GI++++A+Q+
Sbjct: 208 VFEDQRETEKKETYH---YEGGIKSFVEFLNKKKTPVHQEVIYMEQVKEGISVEVAMQY- 263
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+YS+ +L +AN+I T +GGTH+ G +++LTR++N G++ +K+K+ +LSGE VREG
Sbjct: 264 TDSYSENILTFANNIHTEEGGTHLSGFRSALTRSINEYGRQYNLIKEKEENLSGEDVREG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T IISV++P P+FEGQTK +LGN E R +VD V E L +LE +P + +IL K+LSA
Sbjct: 324 ITGIISVKLPQPQFEGQTKAKLGNSEARTIVDAVVTENLETFLEENPKISKAILQKALSA 383
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++ARDL R++S+L S+ LPGKL DC + +EIF+VEGDSAGGSAK GRD
Sbjct: 384 RRAREAARKARDLTRKRSILDSTVLPGKLQDCQLDDNKVTEIFLVEGDSAGGSAKGGRDH 443
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
QAILPLRGKI+NVE+ + ++EI+ +I A G GV G +F E LRY KIII+TD
Sbjct: 444 MTQAILPLRGKIMNVEKARLDRILNSDEIKAMITAFGTGV-GSEFNIEKLRYGKIIIMTD 502
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKS 475
ADVDGAHI+TLLLTFF+RY + L + G +YV PPLY ++RG K ++YCY D ELK+V
Sbjct: 503 ADVDGAHIQTLLLTFFFRYLRPLIEGGHVYVAQPPLYGIKRGSKVIRYCYSDDELKRVMD 562
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ Y I R+KGLGEM QLWETT+NPE R+L ++ IEDA EA+ VF+ LMG+ V
Sbjct: 563 DLGRDNKYKIGRYKGLGEMNADQLWETTMNPEHRILLRVGIEDAQEADEVFTMLMGSDVK 622
Query: 536 TRKELIQ-NAANLVNLD 551
R+E IQ NA N+D
Sbjct: 623 PRREFIQENAVYAENID 639
>gi|219851686|ref|YP_002466118.1| DNA gyrase subunit B [Methanosphaerula palustris E1-9c]
gi|219545945|gb|ACL16395.1| DNA gyrase, B subunit [Methanosphaerula palustris E1-9c]
Length = 665
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/582 (46%), Positives = 389/582 (66%), Gaps = 42/582 (7%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF ++ Y VSGGLHGVG+SVVNALS SL V+RDG Y ++++GK V
Sbjct: 93 VLTILHAGGKFDKNT--YQVSGGLHGVGVSVVNALSVSLVADVFRDGNRYRMEFAQGKVV 150
Query: 62 TTLTCH-------------------VLPVDSKDR---------QGTRIRFWPDKQVFTTA 93
+ L+ H V++K+ GT I F PD +F T
Sbjct: 151 SPLSVHKETLSELLERYRRRYRSEPPREVETKEALFADEGAKLSGTIITFQPDDSIFET- 209
Query: 94 IQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKP 153
+ FD++ + R+RE+AFLN +TI + +D +E+ + GGL E+VQ+L ++
Sbjct: 210 VTFDYDVLVHRLREMAFLNRGITIRI----TDLRSGDKDEFHYDGGLREFVQYLIDGREV 265
Query: 154 LH-DVVGF-RKDVDG-ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRT 210
LH DV+ RKD + + +++ALQ+ + +Y++T+ + NS+ T +GGTH+EG ++++TR
Sbjct: 266 LHPDVIDLSRKDEENKLEVEVALQY-TQSYTETVYTFVNSVNTREGGTHLEGFRSAITRA 324
Query: 211 LNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQS 270
+N+ +K+ +K+ ++L GE VREGLT +IS+++ NP+FEGQTK RLGN VR +VD
Sbjct: 325 INNSARKANLIKNNTLTLRGEDVREGLTAVISIKLANPQFEGQTKMRLGNSNVRGIVDSL 384
Query: 271 VQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSS 330
V + L+EY E +P + +I K+ A +A AA+ AR+L R+KS L SS LPGKLADCS
Sbjct: 385 VYQSLSEYFEENPKSIAAIFEKATVAAQAREAARNARELARRKSTLESSGLPGKLADCSE 444
Query: 331 TTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIR 390
P +SE++IVEGDSAGGSAKQGR+RRFQAILPLRGKILNVE+ + M K+ EIQ LI
Sbjct: 445 RDPAKSEVYIVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKATQHKMIKSVEIQVLIS 504
Query: 391 ALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVP 450
A+G G+ G+ RYH I+++TDADVDGAHI+TLLLTFFYRY L + G +Y+ P
Sbjct: 505 AIGAGI-GDRMDANRARYHHIVLMTDADVDGAHIQTLLLTFFYRYMPELIERGYVYIAQP 563
Query: 451 PLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 510
PL+++ +GKQV+Y Y + E++++ + F + ++QR+KGLGEM QLWETT+NP+ R+
Sbjct: 564 PLFRIAKGKQVRYVYREEEMQQISAEFGDKGV-TVQRYKGLGEMNADQLWETTMNPDTRV 622
Query: 511 LKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
LKQ+ IEDA AN +F LMG V RK I ++A + NLD
Sbjct: 623 LKQIRIEDAGYANEIFEKLMGEDVSARKNFILRHAKEVTNLD 664
>gi|410656647|ref|YP_006909018.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|410659625|ref|YP_006911996.1| DNA gyrase subunit B [Dehalobacter sp. CF]
gi|409019002|gb|AFV01033.1| DNA gyrase subunit B [Dehalobacter sp. DCA]
gi|409021981|gb|AFV04011.1| DNA gyrase subunit B [Dehalobacter sp. CF]
Length = 644
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 385/552 (69%), Gaps = 17/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS +L V + +DG +Y Q+YSRGK +T
Sbjct: 106 LTVLHAGGKF--NNEAYKVSGGLHGVGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLT 163
Query: 63 TLTCHVLPVDS-KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + + + R GT I F PD ++F I +D+ +A R++EL+FLN + I L
Sbjct: 164 ELK----EIGTYQGRSGTMITFQPDPEIFED-IVYDYEVLAHRLKELSFLNKNVMITLID 218
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
E ++ K+ YN GL ++V++LN +K P+H + F + D +++ALQ+ +++Y
Sbjct: 219 ERNEA-KDVYNH---NNGLIDFVEYLNKNKDPIHQKAIVFETEKDNTKVEIALQY-NESY 273
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++T+ YAN+I T +GGTH G KA+LTR +N +K+ +K + +LSGE VREGLT I
Sbjct: 274 TETLFSYANNINTTEGGTHEAGFKAALTRVVNDYARKNNILKGNENNLSGEDVREGLTAI 333
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++ P+FEGQTKT+LGN EVR +VD V E LT + E +P V I+ K L A +A
Sbjct: 334 ISVKIMEPQFEGQTKTKLGNSEVRSIVDSVVGEGLTTFFEENPAVAKKIVEKGLQATRAR 393
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
LAA++ARDL R+KS L S+SLPGKLADC+ P E++IVEGDSAGGSAKQGR+++FQA
Sbjct: 394 LAARKARDLTRRKSALESTSLPGKLADCTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQA 453
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+ +I ALG G+ E+F E RYHK++I+TDADVD
Sbjct: 454 ILPLRGKILNVEKARLDRILGNTEIRAMITALGTGI-SEEFDIEKARYHKVVIMTDADVD 512
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIR LLLTFFYRY K L + +Y+ PPL+KV+ GKQ+QY Y D EL KV + +
Sbjct: 513 GAHIRILLLTFFYRYMKPLIENHYVYIAQPPLFKVKNGKQIQYAYSDKELSKVMETVGRD 572
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
IQR+KGLGEM P QLWETT++PE R + Q+ ++DA A+ +F+ LMG +V+ RKE
Sbjct: 573 KT-EIQRYKGLGEMNPEQLWETTMDPESRTILQVQMDDAMRADELFTMLMGDKVEPRKEF 631
Query: 541 IQ-NAANLVNLD 551
IQ +A ++ NLD
Sbjct: 632 IQKHARDVRNLD 643
>gi|78043837|ref|YP_361487.1| DNA gyrase subunit B [Carboxydothermus hydrogenoformans Z-2901]
gi|77995952|gb|ABB14851.1| DNA gyrase, B subunit [Carboxydothermus hydrogenoformans Z-2901]
Length = 635
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 270/529 (51%), Positives = 380/529 (71%), Gaps = 15/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE LEV + RDG Y+QK+SRG+P+T L + GT I F
Sbjct: 119 LHGVGVSVVNALSEWLEVRIKRDGNLYYQKFSRGEPITELKI----IGKSKSTGTIITFK 174
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEY 143
PD ++F T ++F+++T+A R+ EL++LN + I L+ E + E E F +GG+++Y
Sbjct: 175 PDAEIFET-VEFNYDTLAKRLLELSYLNKNVKIILKDERINKE-----EIFEHSGGIKDY 228
Query: 144 VQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+++LN +K+PLH ++ F K+ D + +++ALQ+C +++S+ +L + N+I T +GGTH G
Sbjct: 229 LKYLNKNKEPLHKIIYFEKEKDEVVVEVALQYC-NSFSENILSFTNNINTTEGGTHEIGF 287
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N KK +K+ ++SL GE +REGLT IISV+VP+P+FEGQTKT+L N EV
Sbjct: 288 KTALTRVINDYAKKYNLIKENNLSLQGEDIREGLTAIISVKVPDPQFEGQTKTKLVNTEV 347
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD V +YL+ YLE +P V ++ ++ A +A AA++AR+L R+K+ L S++LPG
Sbjct: 348 RSIVDSIVSDYLSTYLEENPAVGKKLIENAIRAARAREAARKARELARRKTALESNTLPG 407
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCS P E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NE
Sbjct: 408 KLADCSEKDPSLCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKSRLDKILANE 467
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I ALG GV +DF E RYH++II+TDADVDGAHIRTLLLTFFYRY + L + G
Sbjct: 468 EIRAMITALGTGVD-KDFDIEKARYHRLIIMTDADVDGAHIRTLLLTFFYRYLRPLIENG 526
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLYKV++GK +Y Y D EL++ + + +IQR+KGLGEM P QLWETT
Sbjct: 527 YVYIAQPPLYKVKKGKLEKYLYSDDELERYLNEIGREGV-TIQRYKGLGEMDPEQLWETT 585
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R + ++ +EDAA+A+ +F+ LMG +V+ R+E I+ A LV NLD
Sbjct: 586 MNPETRTILKVTLEDAAKADEIFTILMGDKVEPRREFIEKNAKLVRNLD 634
>gi|376259386|ref|YP_005146106.1| DNA gyrase subunit B [Clostridium sp. BNL1100]
gi|373943380|gb|AEY64301.1| DNA gyrase, B subunit [Clostridium sp. BNL1100]
Length = 642
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/561 (50%), Positives = 387/561 (68%), Gaps = 21/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG S YSVSGGLHGVG SVVNALSES+EV V R+G Y QKYSRGKP
Sbjct: 97 VVHTILHAGGKFG--SGAYSVSGGLHGVGASVVNALSESMEVEVKREGHIYKQKYSRGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT++ V + GT F PD ++F I FD + + R RE+AFLN + I L
Sbjct: 155 VTSVEI----VGETEESGTITTFKPDPEIFED-IVFDFDAMITRYREMAFLNRGIKIKLI 209
Query: 121 KEDSDP--EKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
E D EKN + + GG+ +V++LN K+PLHD V+ F D +++A+Q+ +
Sbjct: 210 DERPDEIIEKNLH----YEGGIISFVEYLNKTKEPLHDKVIYFEGTRDANIVEVAMQY-N 264
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y++T+ YAN+I T +GGTH+ G + ++T+ LN +K +K+ D +LSGE VREGL
Sbjct: 265 DNYNETVFSYANNIATTEGGTHLTGFRTAITKVLNDYARKFNIIKENDKNLSGEDVREGL 324
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV++P P+FEGQTKT+LGN E+R +V+ V + L +LE +P + IL KSL+A
Sbjct: 325 TAVISVKLPEPQFEGQTKTKLGNSEIRTLVENVVSDKLNIFLEENPSIAKIILDKSLTAA 384
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+L R+KS + SS+LPGKLADCS P ++EIFIVEGDSAGGSAKQGRDRR
Sbjct: 385 RAREAARKARELTRRKSAMDSSTLPGKLADCSEKDPTKTEIFIVEGDSAGGSAKQGRDRR 444
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL GK+LNVE+ ++ NE++ +I ALG G+ G+DF LRY KIII+ DA
Sbjct: 445 IQAILPLWGKMLNVEKSRLDKVFDNEKLAPVIIALGAGI-GDDFDTSKLRYDKIIIMADA 503
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV---K 474
DVDG+HIR LLLTFF+RY + L ++G +Y+ +PPL+KV +GK+ Y YDD ++ K+ +
Sbjct: 504 DVDGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPLFKVYKGKEEFYAYDDRQVTKIYEER 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ +IQRFKGLGEM P QLWETT++PE R + ++ ++DA A+ VFS MG +V
Sbjct: 564 GWRKDDPNVNIQRFKGLGEMNPDQLWETTMDPETRTIIKVDVQDAITADEVFSMFMGEKV 623
Query: 535 DTRKELIQNAANLVNLDHLDI 555
+ RKE I A ++ +LDI
Sbjct: 624 EPRKEYIHMHAK--DVTYLDI 642
>gi|326486754|gb|ADZ76420.1| DNA gyrase subunit B [Bacillus amyloliquefaciens]
Length = 588
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 269/534 (50%), Positives = 366/534 (68%), Gaps = 11/534 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF GS GY VSGGLHGVG SVVNALS +L+VTV RDG ++Q Y RG P
Sbjct: 65 VIMTVLHAGGKFDGS--GYKVSGGLHGVGASVVNALSTTLDVTVHRDGKIHYQAYERGVP 122
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT F PD ++F +D++ ++ R+RELAFL + I +
Sbjct: 123 VADLEV----IGDTDKTGTITHFVPDPEIFKETTVYDYDLLSNRVRELAFLTKGVNITI- 177
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED + + NEY + GG++ YV++LN K+ +H+ + + DGIT+++ALQ+ +D+
Sbjct: 178 -EDKREGQERKNEYHYEGGIKSYVEYLNRSKEVIHEEPIYIEGEKDGITVEVALQY-NDS 235
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GGTH G K LTR +N ++ K+ D +LSG+ VREGLT
Sbjct: 236 YTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDYARRKGIFKENDPNLSGDDVREGLTA 295
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D L +L +PD I+ K L A +A
Sbjct: 296 IISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSALETFLLENPDSARKIVEKGLMAARA 355
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 356 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 415
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++++I ALG G+ GEDF E RYHK++I+TDADV
Sbjct: 416 AILPLRGKILNVEKARLDKILSNNEVRSMITALGTGI-GEDFNLEKARYHKVVIMTDADV 474
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 475 DGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRVEYAYNDKQLDELLKELPQ 534
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ +QR+KGLGEM QLWETT++P R L Q+ +EDA +A+ F LMG +
Sbjct: 535 SPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVNLEDAMDADETFEMLMGDK 588
>gi|282855958|ref|ZP_06265249.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
gi|282586177|gb|EFB91454.1| DNA gyrase, B subunit [Pyramidobacter piscolens W5455]
Length = 632
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/554 (49%), Positives = 383/554 (69%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y +SGGLHGVG+SVVNALSE LEVTV+RDG E+H+++ RG P
Sbjct: 92 VVLTVLHAGGKF--DNHNYKISGGLHGVGVSVVNALSEWLEVTVYRDGREWHERFERGTP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ LT ++GT + F PD ++F + F T+ R RE+AFL P L
Sbjct: 150 VSGLTGGT----PTAKRGTTVTFRPDAEIFDE-VAFSAETLGNRFREMAFLIPGLKFIF- 203
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D + + Y + GG+ E+V ++N K+ L + R + DG+ ++ Q+ +D
Sbjct: 204 ---VDEAEGKTWTYHYEGGVSEFVAYINKGKQTLTPRPIVIRGEKDGVAVEAGFQY-TDE 259
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN I TI+GGTH+ G++++LTR +N +++ +K+KD +LSG+ +REGLTC
Sbjct: 260 YIERLYSFANLINTIEGGTHVAGLRSALTRGINEGARRAGVLKEKDENLSGDDLREGLTC 319
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++ NP+FEGQTKT+LGN V+ +VD + + + + LE P V+ I+ K++ A +A
Sbjct: 320 VLSVKLGNPQFEGQTKTKLGNGNVKGIVDSLLYDGILQALEEDPSVIKPIIEKAIKARQA 379
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+LVR KS L SLPGKLADCSS T E E++IVEGDSAGGSAKQGRDR+FQ
Sbjct: 380 REAAKKARELVR-KSALSGLSLPGKLADCSSRTAENCEVYIVEGDSAGGSAKQGRDRKFQ 438
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ M ++EI+ +I+ALG G+ GEDF LRY+KIII+TDADV
Sbjct: 439 AILPLRGKILNVEKARMDKMLGSKEIRVIIQALGCGI-GEDFDIGKLRYNKIIIMTDADV 497
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTFF+R+ + L ++G +Y VPPLY+V+ GK+V Y Y D EL+K +
Sbjct: 498 DGAHISTLLLTFFFRHMRELIEKGHVYQAVPPLYRVQVGKKVDYLYSDKELRKFMDGLAA 557
Query: 480 NA-LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ ++QR+KGLGEM P QLWETT++P R+LKQ+ ++D A A+ F LMG RV+ R+
Sbjct: 558 DGKKAAVQRYKGLGEMNPGQLWETTMDPATRLLKQIELDDLAGADEYFDILMGDRVEPRR 617
Query: 539 ELI-QNAANLVNLD 551
+ I Q+A + NLD
Sbjct: 618 QFIEQHAHEVHNLD 631
>gi|162606284|ref|XP_001713657.1| DNA gyrase subunit B [Guillardia theta]
gi|13794577|gb|AAK39952.1|AF165818_160 DNA gyrase subunit B [Guillardia theta]
Length = 684
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/538 (48%), Positives = 366/538 (68%), Gaps = 13/538 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVN LSE L + R+ + ++ RGK ++ C++ GT I F
Sbjct: 153 LHGVGVSVVNGLSEYLNINTQRNQRKIGMRFVRGKKISE--CNISSFKKNIINGTTINFK 210
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD Q+F + FD I GR+ ELAFLN L + L ED + + + + GG+ EY+
Sbjct: 211 PDYQIFFSEFDFDSYVIGGRLNELAFLNSNLKLLL--EDRRSKIIKSSLFLHDGGIMEYI 268
Query: 145 QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 204
+ +KK LH+ + K + I++ W S+ Y + +L + N+IRT++GGTH++G K
Sbjct: 269 NEMTINKKRLHNPIILSKIFNNSQIEIGFVWSSEQYQENILSFVNNIRTVEGGTHVDGFK 328
Query: 205 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 264
+T+ +N L KK K+K S+SGE +REGLTC+I+V+ PEFEGQ K++LGNP+++
Sbjct: 329 QGITKLVNLLSKKKIKSKEKLNSISGEFIREGLTCLINVKTSEPEFEGQIKSKLGNPDIK 388
Query: 265 KVVDQSVQEY-LTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+V+ ++E ++E + ++L+ +L K++SA+ A A+K+A++LVR+KS+L +LPG
Sbjct: 389 FLVENLIKEEGEIHFIENNSNLLNIVLEKAISAMNAYEASKKAKELVRKKSILEGITLPG 448
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KL+DCS P+ SEIFIVEGDSAGGSAKQ RDRRFQAILPLRGKI+N+E+ DE +Y N
Sbjct: 449 KLSDCSEKNPQFSEIFIVEGDSAGGSAKQARDRRFQAILPLRGKIINIEKNDEKKIYNNT 508
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EIQ+LI ALGLGV+G D LRYHKIII+TDADVDGAHIRTLLLTFFYRYQK L D+G
Sbjct: 509 EIQSLISALGLGVRGNDEDLSNLRYHKIIIMTDADVDGAHIRTLLLTFFYRYQKELIDKG 568
Query: 444 CIYVGVPPLYKVE------RGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPV 497
+Y+ PPLYK+E K QYCY + EL+ + S N +IQRFKGLGEMMP
Sbjct: 569 FVYIACPPLYKIENKKNKNLDKNTQYCYSEGELEYIIQSSHFNK--NIQRFKGLGEMMPE 626
Query: 498 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
QLW+TT++PE R+LK++ + DA A+ +F LMG++V RK+ IQ A+L+ +D LDI
Sbjct: 627 QLWKTTMSPEMRILKKIKLSDAKRADKIFEVLMGSKVPERKKFIQIQASLIKIDSLDI 684
>gi|339443689|ref|YP_004709693.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
gi|338903441|dbj|BAK43292.1| hypothetical protein EGYY_00050 [Eggerthella sp. YY7918]
Length = 647
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/562 (48%), Positives = 372/562 (66%), Gaps = 16/562 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+SVVNALS +EV V RDG EY + GK
Sbjct: 95 VVLTILHAGGKFGGE--GYKVSGGLHGVGVSVVNALSSRVEVFVKRDGSEYKITFDHGKT 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT + GT+ FWPD ++FT +D++T+A R RE+AFLN L I L
Sbjct: 153 KEKLT----KIGPAKGTGTKTTFWPDPEIFTETTVYDYDTLANRFREMAFLNKGLKITLH 208
Query: 121 KED-SDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
+D E E F +AGG+ ++V++LN K+ L+ + F + T+++A+QW +
Sbjct: 209 DARVTDEEGKPRTEVFQYAGGIVDFVKFLNEGKETLNKPIYFEAENADGTVEVAMQWSTS 268
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+++++ +AN+I T +GGTH++G K ++TR++N + +K+KD +LSG+ REGL
Sbjct: 269 YSTNSVMAFANNINTHEGGTHLDGFKQAVTRSINEYARAKGILKEKDSNLSGDDTREGLA 328
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+SV++ +P+FEGQTKT+LGN E+R +V +V + L+EYLE +P I+ K+ ALK
Sbjct: 329 AIVSVKLHDPQFEGQTKTKLGNTEIRPLVQNAVTQGLSEYLEENPSPAKRIIGKATQALK 388
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+K VL S +LPGKLADCSS PE SEIFIVEGDSAGGSAKQ RDR+
Sbjct: 389 AREAARKAREMTRRKGVLDSFALPGKLADCSSKEPENSEIFIVEGDSAGGSAKQARDRKT 448
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVER ++ I +LI A+G + G+DF + RYH+III+TDAD
Sbjct: 449 QAILPLRGKILNVERAGLHRSLSSDTISSLITAIGTNI-GDDFDADQARYHRIIIMTDAD 507
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY----KVERGKQVQ-YCYDDAELKKV 473
VDGAHIR LLLTFFYRY L + G IY+ PP++ K R +++ Y YD+ L
Sbjct: 508 VDGAHIRCLLLTFFYRYMPELINRGYIYIAQPPIFGLKKKNSRSPKIERYIYDENALSST 567
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ + + +QR+KGLGEM P QLWETT+ P R L Q+ I+DAAEA V S LMG
Sbjct: 568 LAEYDDPNKFDVQRYKGLGEMDPDQLWETTMEPATRTLLQVNIDDAAEAERVVSELMGDL 627
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V+ RKE IQ A V LDI
Sbjct: 628 VEPRKEFIQKHARDVRF--LDI 647
>gi|284161217|ref|YP_003399840.1| DNA gyrase subunit beta [Archaeoglobus profundus DSM 5631]
gi|284011214|gb|ADB57167.1| DNA gyrase, B subunit [Archaeoglobus profundus DSM 5631]
Length = 632
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 370/552 (67%), Gaps = 21/552 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVGLSVVNALSE LEV V R+G Y+Q+Y RGKP
Sbjct: 100 IVMTKLHAGGKF--SKKAYKVSGGLHGVGLSVVNALSEWLEVWVKRNGKIYYQRYERGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L V GT+IRF PD ++F +FD++ +A R+RELAFLN L I L
Sbjct: 158 VTPLKV----VGETKETGTKIRFKPDPEIFEVK-EFDYDVVAERLRELAFLNKGLRIKLI 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E + K Y+E G +V++LN K + DVV + +GI +++A Q+ ++ +
Sbjct: 213 DERTGKVKEFYSEEGIVG----FVKYLNKGKDVITDVVYISGEKNGINVEIAFQFTNEDF 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +L +AN+I TI+GGTH+ G +A LTR +N GKK VK K +SG +REGLT +
Sbjct: 269 -ENLLAFANNIHTIEGGTHVSGFRAGLTRAINEYGKKH--VK-KFTPISGSDIREGLTAV 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VP P+FEGQTKT+L N +V+ VV+ V +LE HP I+ K L A+KA
Sbjct: 325 LSVKVPEPQFEGQTKTKLTNSDVKTVVESLVYNNFLRWLEEHPSEAQRIIEKCLLAMKAR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
A+RAR+LV++K+ + S +LPGKLADCSS EE E+FIVEG+SAGGSAKQ RDRRFQA
Sbjct: 385 EMARRARELVKRKAEI-SLTLPGKLADCSSKNVEERELFIVEGESAGGSAKQARDRRFQA 443
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LP+RGKI+NVE+ KNEEI+ + A+G G+ G+DF +RY KIII+TDADVD
Sbjct: 444 VLPIRGKIINVEKAGMLRALKNEEIKAIASAIGGGI-GKDFDLSKVRYGKIIIMTDADVD 502
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY + L + G +Y+ +PPLY+V++G +V Y Y + EL+ V
Sbjct: 503 GAHIRTLLLTFFYRYMRPLIEAGMVYIALPPLYRVKKGDKVYYVYSEKELRDVLKKIGKA 562
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QRFKGLGEM P QLWET +NP+ R L ++ IEDA A +F LMG VD RKE
Sbjct: 563 ---EVQRFKGLGEMNPEQLWETAMNPKTRKLVKVTIEDALIAEKMFRILMGENVDERKEF 619
Query: 541 IQNAANLV-NLD 551
I N A V NLD
Sbjct: 620 ILNHAKEVKNLD 631
>gi|294496880|ref|YP_003560580.1| DNA gyrase subunit B [Bacillus megaterium QM B1551]
gi|294346817|gb|ADE67146.1| DNA gyrase, B subunit [Bacillus megaterium QM B1551]
Length = 638
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 384/553 (69%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS SLEV V RDG ++QKY RG P
Sbjct: 96 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVHVHRDGKVHYQKYERGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT I+F PD ++FT +++D +T+A R+RELAFLN + I +
Sbjct: 154 AADLKV----VGETDKTGTVIQFRPDGEIFTETLEYDFDTLANRLRELAFLNRGIKITI- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E+++ EY + GG++ YV+ LN K+ +H+ + + D I++++A+Q+ +D+
Sbjct: 209 --EDKREEDKRREYHYEGGIKSYVEHLNRSKEVIHEEPIYIEGNRDNISVEIAIQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE VREG+T
Sbjct: 266 YTSNLYSFANNIHTYEGGTHEAGFKTALTRVINDYARKNSVFKDSDANLTGEDVREGITA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E+L YL +P V ++ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDSVFAEHLETYLLENPIVAKKVIEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGR R FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRSRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF RYHKI+I+TDADV
Sbjct: 446 AILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GDDFDISKARYHKIVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+V+Y Y+D +L++V +SFP
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLYKVSQGKKVEYAYNDRQLEEVLASFPE 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 565 GAKPNLQRYKGLGEMNPEQLWETTMDPEFRTLLQVNLQDAIEADETFEILMGDKVEPRRN 624
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 625 FIEENAQYVKNLD 637
>gi|384049352|ref|YP_005497369.1| DNA gyrase subunit B [Bacillus megaterium WSH-002]
gi|345447043|gb|AEN92060.1| DNA gyrase subunit B [Bacillus megaterium WSH-002]
Length = 643
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 384/553 (69%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS SLEV V RDG ++QKY RG P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVHVHRDGKVHYQKYERGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT I+F PD ++FT +++D +T+A R+RELAFLN + I +
Sbjct: 159 AADLKV----VGETDKTGTVIQFHPDGEIFTETLEYDFDTLANRLRELAFLNRGIKITI- 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E+++ EY + GG++ YV+ LN K+ +H+ + + D I++++A+Q+ +D+
Sbjct: 214 --EDKREEDKRREYHYEGGIKSYVEHLNRSKEVIHEEPIYIEGNRDNISVEIAIQY-NDS 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE VREG+T
Sbjct: 271 YTSNLYSFANNIHTYEGGTHEAGFKTALTRVINDYARKNSVFKDSDANLTGEDVREGITA 330
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E+L YL +P V ++ K L A +A
Sbjct: 331 IISIKHPDPQFEGQTKTKLGNSEARTITDSVFAEHLETYLLENPIVAKKVIEKGLMAARA 390
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGR R FQ
Sbjct: 391 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRSRHFQ 450
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF RYHKI+I+TDADV
Sbjct: 451 AILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GDDFDISKARYHKIVIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+V+Y Y+D +L++V +SFP
Sbjct: 510 DGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLYKVSQGKKVEYAYNDRQLEEVLASFPE 569
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 570 GAKPNLQRYKGLGEMNPEQLWETTMDPEFRTLLQVNLQDAIEADETFEILMGDKVEPRRN 629
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 630 FIEENAQYVKNLD 642
>gi|384455130|ref|YP_005667723.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417968034|ref|ZP_12609081.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|418015417|ref|ZP_12654982.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418371928|ref|ZP_12964026.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|345505752|gb|EGX28046.1| DNA gyrase, B subunit [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346983471|dbj|BAK79147.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380340308|gb|EIA28918.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-co]
gi|380343027|gb|EIA31447.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 639
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/558 (50%), Positives = 384/558 (68%), Gaps = 22/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF G+ GY +SGGLHGVG SVVNALSE V V R G Y Q+Y RGKP
Sbjct: 96 VIMTVLHAGGKFNGN--GYKISGGLHGVGASVVNALSERCYVKVSRSGHVYFQEYKRGKP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V + + GT F PDK++FT ++D + ++ R+RELAFLN + I L
Sbjct: 154 VDS----VKKIGNSMYTGTETYFIPDKEIFTETTEYDFDVLSQRLRELAFLNAGIKINL- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+D N E+F++GG+ E+++ +N KK L DV+ F + + + +A+Q+ +D
Sbjct: 209 ---NDLRFNNSEEFFYSGGIREFIKHINKGKKALFEDVIFFEHSKNDLNLQIAIQY-TDN 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK----DKDISLSGEHVRE 235
Y++ +L YAN+I T +GGTH+ G K SLTR +N KK +K D+ SL GE +RE
Sbjct: 265 YNENILTYANNIFTQEGGTHLVGFKTSLTRCVNDYAKKFNYIKESNKDEIKSLIGEDIRE 324
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GL C++SV++ NP+FEGQTKT+LGN EVR +VD +E+L +P++ I K++
Sbjct: 325 GLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVDNIFFNCFSEFLNENPNIGKIICEKAII 384
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA AAK+AR+ R KSVL ++LPGKLADCSS PEE EI+IVEGDSAGGSAKQGRD
Sbjct: 385 AAKAREAAKKARETTR-KSVLDRTALPGKLADCSSKNPEECEIYIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R+FQAILPL GKI+NVE++ + +E I+ +I A G G+ G+DF + +RY++II++T
Sbjct: 444 RKFQAILPLSGKIMNVEKQRIFKILSSETIRCMITAFGCGI-GQDFDVDKIRYNRIILMT 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVK 474
DADVDG+HIRTLLLTF YRY + ++G +Y+ PPLYKV GK+ YCY + EL K+K
Sbjct: 503 DADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLYKVSEGKKEFYCYTEEELNLKLK 562
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+N + IQR+KGLGEM PVQLWETT+NPE R L ++ IE A+ A+ +FS LMG +V
Sbjct: 563 EINKNNLV--IQRYKGLGEMNPVQLWETTMNPESRTLLRVTIEHASYADEIFSILMGDKV 620
Query: 535 DTRKELIQ-NAANLVNLD 551
+ R+E IQ NA N+ NLD
Sbjct: 621 EPRREFIQNNAKNVKNLD 638
>gi|295702247|ref|YP_003595322.1| DNA gyrase subunit B [Bacillus megaterium DSM 319]
gi|294799906|gb|ADF36972.1| DNA gyrase, B subunit [Bacillus megaterium DSM 319]
Length = 638
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 384/553 (69%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS SLEV V RDG ++QKY RG P
Sbjct: 96 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHRDGKVHYQKYERGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT I+F PD ++FT +++D +T+A R+RELAFLN + I +
Sbjct: 154 AADLKV----VGETDKTGTVIQFHPDGEIFTETLEYDFDTLANRLRELAFLNRGIKITI- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E+++ EY + GG++ YV+ LN K+ +H+ + + D I++++A+Q+ +D+
Sbjct: 209 --EDKREEDKRREYHYEGGIKSYVEHLNRAKEVIHEEPIYIEGNRDNISVEIAIQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N +K+ KD D +L+GE VREG+T
Sbjct: 266 YTSNLYSFANNIHTYEGGTHEAGFKTALTRVINDYARKNSVFKDSDANLTGEDVREGITA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E+L YL +P V ++ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDSVFAEHLETYLLENPIVAKKVIEKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS P SE+++VEGDSAGGSAKQGR R FQ
Sbjct: 386 RMAAKKARELTRRKSALEISNLPGKLADCSSKDPSISELYVVEGDSAGGSAKQGRSRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ G+DF RYHKI+I+TDADV
Sbjct: 446 AILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GDDFDISKARYHKIVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G +Y+ PPLYKV +GK+V+Y Y+D +L++V +SFP
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLYKVSQGKKVEYAYNDRQLEEVLASFPE 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 565 GAKPNLQRYKGLGEMNPEQLWETTMDPEFRTLLQVNLQDAIEADETFEILMGDKVEPRRN 624
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 625 FIEENAQYVKNLD 637
>gi|296131558|ref|YP_003638805.1| DNA topoisomerase IV subunit B [Thermincola potens JR]
gi|296030136|gb|ADG80904.1| DNA topoisomerase IV, B subunit [Thermincola potens JR]
Length = 635
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 381/553 (68%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+SVVNALSE LEV V RD YHQ+Y RG P
Sbjct: 96 VVLTILHAGGKFGGD--GYKVSGGLHGVGVSVVNALSEWLEVEVKRDNHIYHQRYERGLP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + + GT+I F PD ++F + F+ T++ R++EL+FLN LTI L+
Sbjct: 154 VTELKI----IGDSNSTGTKITFKPDHEIFEDLV-FNFETLSQRLKELSFLNKGLTIILK 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E EK +E GG+ ++V+ LN +K LH + + F + D + +++ALQ+ +D
Sbjct: 209 DERDGNEKTFQHE----GGIIDFVKHLNKNKDVLHPEPIYFEGEKDDVMVEIALQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N +K +K+ + +L+GE +REGLT
Sbjct: 264 YTENIFSFVNNIHTHEGGTHEAGFKTALTRVVNDYARKYNLLKENENNLTGEDIREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+V P+FEGQTKT+LGN EVR +VD V E + +LE HP I K+++A +A
Sbjct: 324 IISVKVREPQFEGQTKTKLGNSEVRGIVDAVVVEGVGTFLEEHPPFAKRITEKAINAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L S+SLPGKLADCS P E+++VEGDSAGGSAKQGRDRRFQ
Sbjct: 384 REAARKARELTRRKNALESTSLPGKLADCSLKDPAVCELYLVEGDSAGGSAKQGRDRRFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + NEEI+ +I A+G G+ +DF RYHK+II+TDADV
Sbjct: 444 AILPLRGKILNVEKARLDKVLANEEIRAMITAMGTGIS-DDFDISKARYHKLIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPLYKV++ K Y Y D EL+K+ +
Sbjct: 503 DGAHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKVKKNKIDNYVYSDHELEKLLNQIGR 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ S+QR+KGLGEM P QLWETT+NPE R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 563 EGV-SLQRYKGLGEMNPEQLWETTMNPETRTILRVNLEDAMIADEIFTILMGDKVEPRRE 621
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 622 FIQTHAKEVRNLD 634
>gi|336112685|ref|YP_004567452.1| DNA gyrase subunit B [Bacillus coagulans 2-6]
gi|335366115|gb|AEH52066.1| DNA gyrase, B subunit [Bacillus coagulans 2-6]
Length = 641
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 380/554 (68%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALS L+V V RDG YHQKY RGKP
Sbjct: 98 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELDVYVHRDGHIYHQKYRRGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + DR GT F PD ++FT I+FD++ + R+RELAFLN + I +
Sbjct: 156 AFDLKI----IGETDRTGTTTHFKPDPEIFTETIEFDYDILTTRLRELAFLNKGIKITIE 211
Query: 121 -KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
K + +P K Y+ + GG++ YV+ LN K+ LH + + + DGIT++++LQ+ +D
Sbjct: 212 DKREKNPRKQVYH---YEGGIKSYVEHLNRSKEVLHKEPIYVEGEKDGITVEVSLQY-ND 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
++ + +AN+I T +GGTH G K +LTR +N +K+ +K+ + +L+GE VREGLT
Sbjct: 268 GFTSNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNNLIKENEANLTGEDVREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+S++ P+P+FEGQTKT+LGN E R + D E +++ +P V I+ K L A +
Sbjct: 328 AIVSIKHPDPQFEGQTKTKLGNTEARTITDAVFSETFEKFMMENPQVARKIVEKGLMAAR 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A +AAK+AR+L R+KS L S+SLPGKLADC+S P ESE++IVEGDSAGGSAKQGRDR F
Sbjct: 388 ARMAAKKARELTRRKSALESTSLPGKLADCTSRDPSESELYIVEGDSAGGSAKQGRDRMF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+ +I ALG GV GEDF RYHK++I+TDAD
Sbjct: 448 QAILPLRGKILNVEKARLDKILSNAEIRTIITALGTGV-GEDFDISKARYHKVVIMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L D G IY+ PPLYKV++GK+V+Y Y D L+++ ++ P
Sbjct: 507 VDGAHIRTLLLTFFYRYMRPLIDAGYIYIAQPPLYKVQQGKKVEYVYSDRGLEELLNTLP 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT+ P R + Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 567 AQPKPAIQRYKGLGEMNPEQLWETTMEPANRTMLQVSLDDAIEADGTFEMLMGDKVEPRR 626
Query: 539 ELI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 NFIEENAIYVKNLD 640
>gi|76802387|ref|YP_327395.1| DNA topoisomerase II subunit B (DNA gyrase) [Natronomonas pharaonis
DSM 2160]
gi|76558252|emb|CAI49840.1| DNA gyrase subunit B [Natronomonas pharaonis DSM 2160]
Length = 639
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/547 (50%), Positives = 372/547 (68%), Gaps = 9/547 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV + RDG +H ++ G+P
Sbjct: 94 VIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSKWLEVEIKRDGHVWHHRFDHGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V +D + GT IRFWPD +F T F +T+ R+RELAFLNP + I +R
Sbjct: 152 ENGLE-QVREMDPNESTGTEIRFWPDDDIFETT-DFTFSTLESRLRELAFLNPGVGITIR 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D PE+ + + + GG+ E+V +LN + LH+ ++ F + D I +++A+Q +
Sbjct: 210 --DERPEEPDASTFEYDGGIREFVAYLNETRDVLHENIIYFEDEEDDIHVEVAMQ-ATAG 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GGTH+ G K +LTR +N + +KD D +L GE +REGLT
Sbjct: 267 VQGSIHAFANNINTREGGTHLTGFKTALTRVINDYATSNGMLKDLDGNLKGEDIREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++ P+P+FEGQTKT+LGN EVR +V+ +V E L +LE HPD ++I+SK++ A KA
Sbjct: 327 VISIKHPDPQFEGQTKTKLGNGEVRGIVESAVHEELATHLEEHPDTAEAIISKAVEAAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A +L R+KS L S+SLPGKL+DC + PEESE+F+VEGDSAGGSAKQGR+ FQ
Sbjct: 387 RKAAKKAEELTRRKSALESTSLPGKLSDCQTRDPEESELFVVEGDSAGGSAKQGRNPEFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + +N EI+NLI A+G G+ GE+F E RY KIIIL DADV
Sbjct: 447 AILPLRGKILNVEKHRLDRILENNEIRNLITAVGTGI-GEEFDIEEARYQKIIILCDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YR+ L + G +Y PPLY+V G +AE ++
Sbjct: 506 DGAHIRTLLLTFLYRHMTPLIEAGYVYAAQPPLYRVRDGGDTYDAMTEAERDRIVEEVCD 565
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QRFKGLGEM P QLW+TT+NPE R+LKQ+ IEDAA A+ +FS LMG V+ RK+
Sbjct: 566 GSPDQVQRFKGLGEMNPKQLWDTTMNPENRILKQITIEDAAAADRMFSVLMGDAVEPRKQ 625
Query: 540 LIQNAAN 546
I+ A+
Sbjct: 626 FIKEHAD 632
>gi|295111747|emb|CBL28497.1| DNA gyrase subunit B [Synergistetes bacterium SGP1]
Length = 644
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 285/550 (51%), Positives = 373/550 (67%), Gaps = 21/550 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF YSVSGGLHGVG+S VNALSE EVT+ R+GME Q++ RG P
Sbjct: 102 VVLTRLHAGGKF--EQGAYSVSGGLHGVGVSAVNALSEWFEVTIARNGMERTQRFERGVP 159
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L+ V PVD QGTRI + PDK++F + T+ R ELAFLN + I +
Sbjct: 160 VTDLSEGV-PVDW---QGTRIHYLPDKEIFED-VHHSLETLKSRFMELAFLNAGVRIFV- 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D ++ EY F GG+ +VQ+LN D+ L + G R D I +D+ALQ+
Sbjct: 214 ---TDERSSESREYHFEGGVSAFVQYLNRDRTTLFAPPVVISGERND---IKVDMALQY- 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y + +L YAN I T++GGTH+ G++ +LTR LN + K + DK+ +L+G+ ++EG
Sbjct: 267 NDEYQERILTYANLIHTVEGGTHLMGLRQALTRALNEAARSGKLLNDKEDNLTGDDLKEG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LTC++SV++ P+FEGQTKT+LGN +VR VD V E L +E PD++ I+ K+L A
Sbjct: 327 LTCVLSVKLVEPQFEGQTKTKLGNSDVRGAVDSVVYEGLLSVIEERPDIVRPIVDKALRA 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+A++LVR K + +LPGKLADCSS TPE SEI+IVEGDSAGGSAKQ RDR
Sbjct: 387 RRAREAAKKAKELVR-KGAMTGMNLPGKLADCSSKTPENSEIYIVEGDSAGGSAKQARDR 445
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ E M +N EIQ +I ALG G+ G +F LRYHKIII+TD
Sbjct: 446 TFQAILPLRGKILNVEKAQEHKMLQNREIQTIITALGCGI-GTEFNATRLRYHKIIIMTD 504
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHI TLLLTFFYR+ L EG IY+ PPLY+V+RGKQV YCY + EL++
Sbjct: 505 ADVDGAHISTLLLTFFYRHMPELLTEGYIYLAQPPLYRVQRGKQVHYCYTEKELRQHVDG 564
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P +QR+KGLGEM P QLW TT++P R+LK++ ++D A+ F LMG RV+
Sbjct: 565 APDPDKVGVQRYKGLGEMNPEQLWMTTMDPANRILKKVELDDDLLADEYFDILMGERVEP 624
Query: 537 RKELIQNAAN 546
R+E I AN
Sbjct: 625 RREFITTNAN 634
>gi|342731691|ref|YP_004770530.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|342329146|dbj|BAK55788.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-mouse-Japan]
Length = 639
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/558 (50%), Positives = 384/558 (68%), Gaps = 22/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF G+ GY +SGGLHGVG SVVNALSE V V R G Y Q+Y RGKP
Sbjct: 96 VIMTVLHAGGKFNGN--GYKISGGLHGVGASVVNALSERCYVKVSRGGHVYFQEYKRGKP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V + + GT F PDK++FT ++D + ++ R+RELAFLN + I L
Sbjct: 154 VDS----VKKIGNSMYTGTETYFIPDKEIFTETTEYDFDVLSQRLRELAFLNAGIKINL- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+D N E+F++GG+ E+++ +N KK L DV+ F + + + +A+Q+ +D
Sbjct: 209 ---NDLRFNNSEEFFYSGGIREFIKHINKGKKALFEDVIFFEHSKNDLNLQIAIQY-TDN 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK----DKDISLSGEHVRE 235
Y++ +L YAN+I T +GGTH+ G K SLTR +N KK +K D+ SL GE +RE
Sbjct: 265 YNENILTYANNIFTQEGGTHLVGFKTSLTRCVNDYAKKFNYIKESNKDEIKSLIGEDIRE 324
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GL C++SV++ NP+FEGQTKT+LGN EVR +VD +E+L +P++ I K++
Sbjct: 325 GLVCVLSVKMANPQFEGQTKTKLGNSEVRSIVDNIFFNCFSEFLNENPNIGKIICEKAII 384
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA AAK+AR+ R KSVL ++LPGKLADCSS PEE EI+IVEGDSAGGSAKQGRD
Sbjct: 385 AAKAREAAKKARETTR-KSVLDRTALPGKLADCSSKNPEECEIYIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R+FQAILPL GKI+NVE++ + +E I+ +I A G G+ G+DF + +RY++II++T
Sbjct: 444 RKFQAILPLSGKIMNVEKQRIFKILSSETIRCMITAFGCGI-GQDFDVDKIRYNRIILMT 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVK 474
DADVDG+HIRTLLLTF YRY + ++G +Y+ PPLYKV GK+ YCY + EL K+K
Sbjct: 503 DADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLYKVSEGKKEFYCYTEEELNLKLK 562
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+N + IQR+KGLGEM PVQLWETT+NPE R L ++ IE A+ A+ +FS LMG +V
Sbjct: 563 EINKNNLV--IQRYKGLGEMNPVQLWETTMNPESRTLLRVTIEHASYADEIFSILMGDKV 620
Query: 535 DTRKELIQ-NAANLVNLD 551
+ R+E IQ NA N+ NLD
Sbjct: 621 EPRREFIQNNAKNVKNLD 638
>gi|298675298|ref|YP_003727048.1| DNA gyrase subunit B [Methanohalobium evestigatum Z-7303]
gi|298288286|gb|ADI74252.1| DNA gyrase, B subunit [Methanohalobium evestigatum Z-7303]
Length = 634
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 388/553 (70%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF +S Y VSGGLHGVG+SVVN LSE L+V V RD Y+Q Y +G P
Sbjct: 94 VVMTLLHAGGKFDKNS--YKVSGGLHGVGVSVVNGLSEWLDVEVKRDDKRYYQHYEKGYP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + + GT+ F PD ++F + +FD+++++ R+RELAFLN + I ++
Sbjct: 152 KTEVQV----LGESEGNGTKFTFKPDSEIFEST-EFDYDSLSTRLRELAFLNKGIKITIK 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E S E+ Q + + + GG+ +V+ LN ++ P+H+ + F + DG ++++LQ+ +D+
Sbjct: 207 DERS--EEGQEDVFQYDGGIVSFVKHLNKNRSPIHEEPIYFEGESDGTIVEISLQY-TDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN+I T +GGTH+ G K +LTR N +K++ ++ ++ L+GE +REGLT
Sbjct: 264 YGEYVYSFANNINTHEGGTHVIGFKTALTRVANDYIRKNE-IEKGNVRLTGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS ++P+P+FEGQTKTRLGN +V+ VV+ V E L+ YLE +P + +SI+ K+LSA +A
Sbjct: 323 IISAKIPDPQFEGQTKTRLGNSDVKGVVESLVTEELSRYLEENPKIANSIIKKALSAKRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KS L S+LPGKLADCS T P SEIF+VEGDSAGGSAK GRDRRFQ
Sbjct: 383 REAAKRARELTRRKSALEVSTLPGKLADCSETDPSVSEIFLVEGDSAGGSAKMGRDRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP RGKI+NVE+ + + KN EI +LI A+G G+ GEDF RYHK+II+TDADV
Sbjct: 443 AILPFRGKIINVEKARLSKVLKNNEILSLITAMGTGI-GEDFDINKARYHKVIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFF+RY + D G +Y+ PPLY++++GK+ Y + + E K K
Sbjct: 502 DGAHIRTLILTFFFRYMNEMVDNGYVYIAQPPLYRIKKGKKEFYIHTEKE-KNAKLKELG 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
SIQR+KGLGEM P QLW TT+NPE R L Q+ +EDAA A+ +FS LMG V+ R++
Sbjct: 561 EKGVSIQRYKGLGEMNPEQLWATTMNPESRKLTQVTMEDAAAADEMFSILMGEEVEPRRQ 620
Query: 540 LIQ-NAANLVNLD 551
I+ +A +VNLD
Sbjct: 621 FIEKHATEVVNLD 633
>gi|315925615|ref|ZP_07921825.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621156|gb|EFV01127.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 668
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/529 (49%), Positives = 365/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE L V V ++ Y Q + G + L V + +R GT+I F
Sbjct: 149 LHGVGVSVVNALSEVLTVEVKQNKKVYRQTFEHGNKTSELDV----VGTTNRTGTKIYFK 204
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F T + +D++ + R+RELAFLN + I L+ D P + Q EY +AGG+ Y+
Sbjct: 205 PDPEIFDTTV-YDYDVLEHRLRELAFLNKGVAITLK--DERPGQEQTGEYHYAGGIRSYI 261
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+++N +K PL+ + + K +D ++LA Q+ Y + + YAN+I T +GGTH+ G
Sbjct: 262 EYMNRNKDPLYPQITYYEKAMDEYALELAFQYTR-GYQENIYSYANNIYTPEGGTHLNGF 320
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K++LTRT+N+ +K+ +K D +LSG+ VREGLT +IS+++ P+FEGQTKT+LGNPEV
Sbjct: 321 KSALTRTINNYARKAGLLKQNDKNLSGDDVREGLTAVISIKLLEPQFEGQTKTKLGNPEV 380
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+ +V+ V E L+ +LE +P+V +I+ K++SA A +AAKRAR++ R+KS L ++SLPG
Sbjct: 381 KGIVETIVNEELSNFLEENPNVAKAIVEKNISASHARMAAKRAREMTRRKSALDATSLPG 440
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC P +SEIFIVEGDSAGGSAK GRD R QAILPLRGKILNVE+ M ++
Sbjct: 441 KLADCREKDPAQSEIFIVEGDSAGGSAKVGRDSRIQAILPLRGKILNVEKARLDRMLTSD 500
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
I+ +I A G G+ GEDF E RYHKI+I+TDADVDGAHIRTLLLTFFYRY + L D G
Sbjct: 501 TIKGMITAFGTGI-GEDFDIEKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRGLIDHG 559
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLYKV GK V+Y YDDA+L + + + ++QR+KGLGEM QLWETT
Sbjct: 560 YVYIAQPPLYKVSWGKHVEYAYDDADLNR-RLEDKDRSRVTLQRYKGLGEMDAEQLWETT 618
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
+NP+ R + ++ IEDA A+ +F+ LMG +V RKE I+ NA + NLD
Sbjct: 619 MNPDTRTMLRVGIEDATYADEIFTMLMGDKVQPRKEFIERNAKKVQNLD 667
>gi|402829788|ref|ZP_10878661.1| DNA gyrase, B subunit [Slackia sp. CM382]
gi|402283455|gb|EJU31969.1| DNA gyrase, B subunit [Slackia sp. CM382]
Length = 648
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/562 (49%), Positives = 374/562 (66%), Gaps = 16/562 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKFGG GY VSGGLHGVG+S VNALS +EV V RDG Y + RG
Sbjct: 96 VVLTKLHAGGKFGGE--GYKVSGGLHGVGVSCVNALSTRMEVDVCRDGSRYRIVFERG-- 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VTT + DSK + GT + FWPD ++FT +D++ + R RE+AFLN L I +
Sbjct: 152 VTTEKLKRIG-DSK-KTGTTVTFWPDPEIFTDTTVYDYSILQNRFREMAFLNRGLHIEMH 209
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
E D D E N + + F +AGG+ ++V++LN K+ L+ + F + T+++A+QW +
Sbjct: 210 DERDLDEEGNPHTDSFQYAGGIVDFVKYLNNGKETLNKPIYFEAENKDGTVEIAMQWTTS 269
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
++ + +AN+I T +GGTH+EG K +LTRT+N + +K+KD +L+G+ REGL+
Sbjct: 270 YSANGVEAFANNINTTEGGTHLEGFKNALTRTINDYARAKGLLKEKDSNLTGDDAREGLS 329
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV++ P+FEGQTKT+LGN E+R +V +V + L EYLE +P I++K+ ALK
Sbjct: 330 AVISVKLHEPQFEGQTKTKLGNTEIRGLVQGAVTKGLAEYLEENPTPAKRIVNKASQALK 389
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+K VL S S+PGKLADCSS P EIFIVEGDSAGGSAKQ RDR++
Sbjct: 390 AREAARKAREMTRRKGVLDSFSMPGKLADCSSRDPSACEIFIVEGDSAGGSAKQARDRKY 449
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVER ++ I +LI A+G + GED+ E RYH+III+TDAD
Sbjct: 450 QAILPLRGKILNVERAGLHRALSSDTISSLITAIGTNI-GEDYDGEKARYHRIIIMTDAD 508
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-----GKQVQYCYDDAELKKV 473
VDGAHIR LLLTFFYRY L + G +Y+ PPLY +++ GK ++Y Y+D ++
Sbjct: 509 VDGAHIRCLLLTFFYRYMPDLINRGYVYIAQPPLYGLKKKNSASGKILKYIYNDEAKDEL 568
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ + Y +QR+KGLGEM P QLWETT+ PE R L Q+ IEDA A + S LMG
Sbjct: 569 VAKLENPDKYEMQRYKGLGEMDPQQLWETTMEPETRTLLQVDIEDAVAAELAVSELMGEL 628
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V+ RKE IQ A V LDI
Sbjct: 629 VEPRKEFIQKHARDVRF--LDI 648
>gi|304437923|ref|ZP_07397869.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304369063|gb|EFM22742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 685
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 285/554 (51%), Positives = 377/554 (68%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG + +SRG
Sbjct: 144 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTEMDVEVRRDGKIFAISFSRG-- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLNPKLTIAL 119
VTT H + + D GTR+ F PD ++FT T FD T+ R+RELAFLN +TI L
Sbjct: 200 VTTTKLH--EIGTSDTTGTRVHFVPDPEIFTVTTYSFD--TLKHRLRELAFLNHGITITL 255
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
E +++ + F GG+ +V LN K+ +++ + F D I +++A+Q+ +D
Sbjct: 256 TDERGTEVRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDIVVEIAMQY-ND 312
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLT
Sbjct: 313 SYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGEDVREGLT 372
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P V +L K+L A +
Sbjct: 373 AVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAVTKKVLDKALMASR 432
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRF
Sbjct: 433 AREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRF 492
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDAD
Sbjct: 493 QAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKIIIMTDAD 551
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 VDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDDEQAKKLDEIG 611
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R+
Sbjct: 612 RDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRR 670
Query: 539 ELIQNAANLV-NLD 551
+ I+ A LV NLD
Sbjct: 671 QFIEENAKLVRNLD 684
>gi|393809327|gb|AFN25837.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 375/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSVKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARVIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|417643976|ref|ZP_12293998.1| DNA gyrase, B subunit [Staphylococcus warneri VCU121]
gi|445058376|ref|YP_007383780.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
gi|330685298|gb|EGG96959.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU121]
gi|443424433|gb|AGC89336.1| DNA gyrase subunit B [Staphylococcus warneri SG1]
Length = 644
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/552 (50%), Positives = 370/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D +FT +++ T+ RIRELAFLN + I L
Sbjct: 159 QFDLK----EIGSTDKTGTAIRFKADSSIFTETTVYNYETLQQRIRELAFLNKGIQITLT 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + + Q + Y++ GG++ YV+ LN +K+P+H + + + D I +++A+Q+ +
Sbjct: 215 DERDEDDIRQ-DSYYYEGGIKSYVEMLNENKEPIHGEPIYIHQSKDDIEVEIAIQY-NKG 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REGLT
Sbjct: 273 YSTNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGMNSKIIKEDKDRLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPSVGRIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSSTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVTLEDAIDADQTFEMLMGDIVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|448399828|ref|ZP_21571061.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
gi|445668281|gb|ELZ20911.1| DNA gyrase subunit B [Haloterrigena limicola JCM 13563]
Length = 643
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/551 (48%), Positives = 372/551 (67%), Gaps = 15/551 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V R+G + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRNGGVFRHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ D GT IRFWPD +F T +F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDDETGTEIRFWPDTGIFETG-EFAFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 KE-----DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQ 174
E D P Y + GG+ E+V++LN + +HD V + D D I +++A+Q
Sbjct: 210 DEREEKSDDGPVAETYE---YDGGIREFVEYLNETRSAMHDDVIYFDDEDQNIQVEVAMQ 266
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
++ ++ +AN+I T +GG+H+ G K +LTRT+N ++ + D + +L GE +R
Sbjct: 267 -ATEELQGSIHAFANNINTREGGSHLTGFKTALTRTVNDYANENDLLSDLEDNLKGEDIR 325
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++
Sbjct: 326 EGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIVTKAV 385
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA +AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R
Sbjct: 386 EAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQAR 445
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+
Sbjct: 446 NPEFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMA 504
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE ++
Sbjct: 505 TDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAERDRIV 564
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LMG V
Sbjct: 565 EEKCDGNPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLMGDAV 624
Query: 535 DTRKELIQNAA 545
+ RK+ I++ A
Sbjct: 625 EPRKQFIKDHA 635
>gi|262039519|ref|ZP_06012821.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
gi|261746500|gb|EEY34037.1| DNA gyrase, B subunit [Leptotrichia goodfellowii F0264]
Length = 660
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/578 (48%), Positives = 379/578 (65%), Gaps = 36/578 (6%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEVTV RDG Q Y RG+P
Sbjct: 91 VVMTVLHAGGKF--DNDNYKVSGGLHGVGVSVVNALSEWLEVTVTRDGQIVRQTYKRGEP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ + + S + GT +F D ++F T + ++ + + R++ELA+LN LTI L
Sbjct: 149 VSDV--EKIGEASPEAHGTTTKFKADPEIFETTV-YEFSVLESRLKELAYLNKGLTITLI 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD------------VDG-- 166
E D EK + ++ F GG+ +++ + D++ + D V + D VD
Sbjct: 206 DE-RDQEKIKEEKFLFEGGIIDFLNEI-ADEEKITDEVIYMSDTYEVEAAKEVEIVDDNG 263
Query: 167 -----------ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLG 215
+ +++A+ + + + + + N+I T +GGTH+ G + +LTRT+N +
Sbjct: 264 NTVKKMRAAKFVEVEIAMSYTI-SQRENVYSFVNNINTHEGGTHVSGFRTALTRTINDIA 322
Query: 216 KKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYL 275
K+ VKDKD + G VREGL C+ISV++P P+FEGQTKT+LGN EV +V V L
Sbjct: 323 KQMNIVKDKDGTFQGTDVREGLVCVISVKIPEPQFEGQTKTKLGNSEVTGIVSNIVGNNL 382
Query: 276 TEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEE 335
YLE HP + I+ K + +A AAK+AR+LV +K+ L SLPGKLADCSS P E
Sbjct: 383 KFYLEDHPKEAEKIIEKMTMSKRAREAAKKARELVLRKNTLEVGSLPGKLADCSSKDPSE 442
Query: 336 SEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG 395
SEIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILNVE+ + +N EI+ +I A G G
Sbjct: 443 SEIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEKSGMHKLLENAEIRAMITAFGAG 502
Query: 396 VKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV 455
G+D E LRYHKIII+TDADVDGAHIRTL+LTFFYR + L +EG IY+ PPLYKV
Sbjct: 503 F-GDDMDLEKLRYHKIIIMTDADVDGAHIRTLMLTFFYRQLRELINEGYIYIAQPPLYKV 561
Query: 456 ERGKQVQYCYDDAELKKVKSSFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQL 514
+ GK ++Y Y D ++KK+ S N Y+IQR+KGLGEM P QLWETTL+PE R L ++
Sbjct: 562 QAGKAIKYAYSDEQMKKITSVLERDNRRYTIQRYKGLGEMNPEQLWETTLDPEVRTLLKV 621
Query: 515 VIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+EDA+ A+ +F+ LMG +V+ R++ I+ AN V NLD
Sbjct: 622 TMEDASYADKMFNILMGDKVEPRRQFIEENANYVRNLD 659
>gi|386002763|ref|YP_005921062.1| DNA gyrase subunit B [Methanosaeta harundinacea 6Ac]
gi|357210819|gb|AET65439.1| DNA gyrase, B subunit [Methanosaeta harundinacea 6Ac]
Length = 640
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/553 (49%), Positives = 390/553 (70%), Gaps = 18/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG+SVVNALSE +EV V R+ + Y Q+Y RG+P
Sbjct: 103 IVMTKLHAGGKFDHKS--YKVSGGLHGVGVSVVNALSEWMEVEVRRNNLVYWQRYERGRP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L H + D GT +RF PD ++F A++F +T+A R+RELAFLN L I++
Sbjct: 161 VSDLEVHGV----SDHTGTTVRFKPDPEIFE-AVEFSFDTLASRLRELAFLNRGLKISVE 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E + + EY + GG+ +V+ LN +K LH + F ++ DG ++++ALQ+ ++
Sbjct: 216 DERTAKRR----EYLYDGGIVSFVEHLNKNKDILHSPPIYFNREKDGTSVEVALQY-NNT 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L +AN+I T +GGTH+ G +A+LT+T N + +K +KD D L+G+ +REGL
Sbjct: 271 YNENVLSFANNINTREGGTHLAGFRAALTKTTNEYARANKLLKD-DTKLTGDDLREGLVA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISVR+ +P+FEGQTKT+LGN V +V V E L+E+ E +P V I+ K+ A +A
Sbjct: 330 VISVRLADPQFEGQTKTKLGNSAVGGIVSSLVSEGLSEFFEENPLVTVKIVEKATQAYRA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+L R+K+ L S LPGKLADC+ P+ SE++IVEG+SAGGSAKQGR+R FQ
Sbjct: 390 RVAARKARELTRRKNALSSGGLPGKLADCAEKDPQLSELYIVEGESAGGSAKQGRNRHFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVER + KN EI+N+I ALG G+ G+DF+ + RY K++I+TDADV
Sbjct: 450 AILPLRGKILNVERARLDKILKNNEIRNIITALGTGI-GDDFQLDRARYRKVVIMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFFYRY + L + G +Y+ PPLY+V+RGK Y Y +A+L +
Sbjct: 509 DGSHIRTLLLTFFYRYMRELVEAGYVYIAQPPLYQVKRGKAATYAYSEADLAGILEGSGG 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM P QLWETT++PE+R + ++ +EDA EA+ +FS LMG +V+ R+E
Sbjct: 569 KA--TVQRYKGLGEMNPEQLWETTMDPERRTMLKVTLEDAMEADEIFSILMGEKVEPRRE 626
Query: 540 LIQ-NAANLVNLD 551
I+ +A ++ NLD
Sbjct: 627 FIEAHARDVRNLD 639
>gi|402833234|ref|ZP_10881854.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
gi|402281226|gb|EJU29917.1| DNA gyrase, B subunit [Selenomonas sp. CM52]
Length = 690
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/554 (49%), Positives = 381/554 (68%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG + ++ +G
Sbjct: 150 VVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTSMDVEVKRDGKIHSIRFEQGVT 207
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT + ++ GT++ F PD ++FT Q+ +T+ R+RELAFLN +TI L
Sbjct: 208 AAPLTV----IGETEKTGTKVHFVPDPEIFTVT-QYSFDTLKHRLRELAFLNQGITIRLM 262
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
+ + + Y F+ GG+ +V+ LN K+ +H + F D +++A+Q+ +D+
Sbjct: 263 DKRGEGREESY---FYEGGIRSFVEHLNRKKEVIHPTPIYFNGIKDDTVVEIAMQY-NDS 318
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSGE VREGLTC
Sbjct: 319 YMENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARKQGILKDKDGNLSGEDVREGLTC 378
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++ P+FEGQTKT+LGN EVR +VD V E LTEY E +P + ++ K++ A +A
Sbjct: 379 VISLKIHEPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVIEKAIMASRA 438
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 439 REAARKARELTRRKNALEVSSLPGKLADCSIKDPEQAEIYLVEGDSAGGSAKQGRDRRFQ 498
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ +DF RY KIII+TDADV
Sbjct: 499 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-DDFDIAKRRYGKIIIMTDADV 557
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKSSFP 478
DG+HIRTLLLTFFYRY K L + G +Y+ PPLY++ +GK+ Y Y D EL +K+
Sbjct: 558 DGSHIRTLLLTFFYRYMKPLIERGHVYIAQPPLYQIRKGKKHWYTYSDDELAQKLNEVGR 617
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA ++QR+KGLGEM P QLWETT++PE R + Q+ +EDA EA+ +F+ LMG +V+ R+
Sbjct: 618 DNA--TVQRYKGLGEMNPEQLWETTMDPEGRTMLQVRMEDAEEADELFTILMGDKVEPRR 675
Query: 539 ELIQNAANLV-NLD 551
+ I+ A V NLD
Sbjct: 676 QFIEEHAKHVRNLD 689
>gi|260887491|ref|ZP_05898754.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|330837873|ref|YP_004412453.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|260862778|gb|EEX77278.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
gi|329745637|gb|AEB98993.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185]
Length = 690
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/554 (49%), Positives = 381/554 (68%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG + ++ +G
Sbjct: 150 VVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSTSMDVEVKRDGKIHSIRFEQGVT 207
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT + ++ GT++ F PD ++FT Q+ +T+ R+RELAFLN +TI L
Sbjct: 208 AAPLTV----IGETEKTGTKVHFVPDPEIFTVT-QYSFDTLKHRLRELAFLNQGITIRLV 262
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
+ + + Y F+ GG+ +V+ LN K+ +H + F D +++A+Q+ +D+
Sbjct: 263 DKRGEGREESY---FYEGGIRSFVEHLNRKKEVIHPTPIYFNGIKDDTVVEIAMQY-NDS 318
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSGE VREGLTC
Sbjct: 319 YMENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARKQGILKDKDGNLSGEDVREGLTC 378
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++ P+FEGQTKT+LGN EVR +VD V E LTEY E +P + ++ K++ A +A
Sbjct: 379 VISLKIHEPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVIEKAIMASRA 438
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 439 REAARKARELTRRKNALEVSSLPGKLADCSIKDPEQAEIYLVEGDSAGGSAKQGRDRRFQ 498
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ +DF RY KIII+TDADV
Sbjct: 499 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-DDFDIAKRRYGKIIIMTDADV 557
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKSSFP 478
DG+HIRTLLLTFFYRY K L + G +Y+ PPLY++ +GK+ Y Y D EL +K+
Sbjct: 558 DGSHIRTLLLTFFYRYMKPLIERGHVYIAQPPLYQIRKGKKHWYTYSDDELAQKLNEVGR 617
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
NA ++QR+KGLGEM P QLWETT++PE R + Q+ +EDA EA+ +F+ LMG +V+ R+
Sbjct: 618 DNA--TVQRYKGLGEMNPEQLWETTMDPEGRTMLQVRMEDAEEADELFTILMGDKVEPRR 675
Query: 539 ELIQNAANLV-NLD 551
+ I+ A V NLD
Sbjct: 676 QFIEEHAKHVRNLD 689
>gi|374294499|ref|YP_005044690.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
gi|359823993|gb|AEV66766.1| DNA gyrase subunit B [Clostridium clariflavum DSM 19732]
Length = 641
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/554 (50%), Positives = 383/554 (69%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFGG GYSVSGGLHGVG SVVNALSE LEV V+R+G Y Q+Y RGK
Sbjct: 98 VVHTILHAGGKFGGE--GYSVSGGLHGVGASVVNALSEYLEVEVYREGNIYRQRYERGKV 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + DR GT+ F PD +F I+FD+ T+ R RELAFLN LTI L
Sbjct: 156 VSKLEV----IGKTDRTGTKTTFKPDPLIFE-KIEFDYETLLNRFRELAFLNKGLTIRLI 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
D E+ E + GG+ +V+ LN +K+ +H + F DG +++A+Q+ +D
Sbjct: 211 --DKRKEEPVVKELHYEGGIISFVEHLNRNKEVIHQPPIYFESLKDGNHVEIAMQY-NDT 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH+ G K ++T+ N +K +K+ D +L GE VREGLT
Sbjct: 268 YNENIYSFANNIATTEGGTHLTGFKTAITKVFNDYCRKYNYLKENDKNLLGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ P+FEGQTKT+LGN E+R +V+ +V E L+ +LE +P + +I+ KS++A +A
Sbjct: 328 VISVKLHEPQFEGQTKTKLGNSEIRSLVENAVSEKLSAFLEENPSIAKAIVEKSITAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++ R+KS L S++LPGKLADCS P EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 388 REAARKAREMTRRKSALESTTLPGKLADCSEKDPSLCEIYIVEGDSAGGSAKQGRDRRFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL GK+LNVE+ +Y NE++ +I ALG + GEDF E LRYHKIII+ DADV
Sbjct: 448 AILPLWGKMLNVEKSRIDKVYTNEKLLPVITALGANI-GEDFDIEKLRYHKIIIMADADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP- 478
DG HIRTLLLTF YRY + L + G +Y+ PPL+K+ +GK+ Y Y++ +L+K+ +
Sbjct: 507 DGQHIRTLLLTFLYRYMRPLVEGGYVYIAQPPLFKITKGKEEVYAYNEKQLEKILNEKGW 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+IQR+KGLGEM P QLWETT+NP+ R + ++ ++DA A+ +FS LMG +V+ RK
Sbjct: 567 KKGECTIQRYKGLGEMNPEQLWETTMNPKTRSMLRVELKDAIAADEIFSILMGEKVEPRK 626
Query: 539 ELIQ-NAANLVNLD 551
E IQ NA ++ NLD
Sbjct: 627 EFIQANAKDVTNLD 640
>gi|435852819|ref|YP_007314138.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
gi|433669230|gb|AGB40045.1| DNA gyrase, B subunit [Halobacteroides halobius DSM 5150]
Length = 634
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 391/553 (70%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF G GY VSGGLHGVG+SVVNALSE LEV V R+G Y+QKY RG P
Sbjct: 94 VVMTVLHAGGKFEGE--GYKVSGGLHGVGVSVVNALSEWLEVRVHRNGKIYYQKYHRGVP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + + GT IRF D+++F + ++++++T++ R +ELA+LN ++ I +
Sbjct: 152 DNDLEV----IGNTEETGTEIRFKADEEIFES-VRYNYDTLSQRFKELAYLNKEVKIKIL 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E D ++ E+ + GG+ +V+ +N P+H DV+ F + +D +++A+Q+ +D
Sbjct: 207 DEREDLIED---EFKYDGGIISFVEEINEHNTPIHEDVIFFEEQIDNTEVEVAIQYNTD- 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+D + +AN+I T +GGTH+ G K++LTRT+N +++ +KD D +LSG+ +REG+
Sbjct: 263 YADKIFTFANNINTHEGGTHLSGFKSALTRTINDYARQNDFLKDDDNNLSGDDIREGIVA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
II+VR+ +P+FEGQTKT+LGN E+R +VD V + L+ L +P + I+ KS++A +A
Sbjct: 323 IINVRLTDPQFEGQTKTKLGNSEIRGMVDSIVSKGLSTILSENPKLGKQIVKKSIAAAQA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L ++K+ L S++LPGKLADCSS EESEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 383 RKAAKKARELTKRKNALVSTALPGKLADCSSRNAEESEIYIVEGDSAGGSAKQGRDREFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + N+EI++LI ALG G+ ++F LRY KIII+TDADV
Sbjct: 443 AILPLKGKILNVEKARLDRVLSNKEIKSLITALGTGI-ADEFDMNNLRYRKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L +EG +Y+ PPLYKV++G++ +Y Y D +L+ +
Sbjct: 502 DGAHIRTLLLTFFYRYMRPLLEEGLVYIAQPPLYKVKKGRREEYVYKDRQLQDLLEEIGK 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
SIQR+KGLGEM P+QLW+TT++PE R L Q+ I D A+ VF+ LMG +V R+E
Sbjct: 562 KRT-SIQRYKGLGEMNPIQLWKTTMDPENRTLLQVQISDEVIADDVFTKLMGDKVKPRRE 620
Query: 540 LIQNAANLV-NLD 551
IQ A V NLD
Sbjct: 621 FIQRHAKEVQNLD 633
>gi|258646055|ref|ZP_05733524.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
gi|260403425|gb|EEW96972.1| DNA gyrase, B subunit [Dialister invisus DSM 15470]
Length = 649
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/554 (50%), Positives = 386/554 (69%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY +SGGLHGVG+SVV ALSE VTV R+G + K +RG
Sbjct: 107 VVLTVLHAGGKFGGD--GYPISGGLHGVGISVVTALSEWTTVTVKREGHFHEMKLARG-- 162
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T H+ GT++ F PD ++F FD++T+ R+RELAFLN LTI L
Sbjct: 163 --VVTQHMKTFGETTETGTQVTFKPDGEIFKEGTDFDYDTLKVRMRELAFLNKGLTITL- 219
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSD 178
D + + +AGG+ E++++LN + K L D V+ F + D + +D+A+Q+ +
Sbjct: 220 -TDVRDGATHQDVFCYAGGIVEFIKFLN-EGKDLVDPGVISFEGEKDRVIVDIAMQYQA- 276
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
YS++M + N+I T++GG H+ G + +LTRT+N + + +K + +LSG+ VREGLT
Sbjct: 277 GYSESMYTFVNNINTVEGGMHLTGFRNALTRTINDYARSNNLLKPNEENLSGDDVREGLT 336
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
C+ISV+VPNP+FEGQTKT+LGN +V+ +VD V + L YLE HP I+SKS++A +
Sbjct: 337 CVISVKVPNPQFEGQTKTKLGNQDVKGIVDTIVSDGLRTYLEEHPAEAKEIISKSITANR 396
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA+RAR+L R+K+ L SSLPGKLADCS P+ +EI+IVEGDSAGGSAK GRDRR+
Sbjct: 397 AREAARRARELTRRKNALEVSSLPGKLADCSEKDPKFTEIYIVEGDSAGGSAKSGRDRRY 456
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + ++ I+ +I A G GV EDF + LRY+KIII+TDAD
Sbjct: 457 QAILPLRGKILNVEKARLDKVLNSDAIRTMITAFGTGV-AEDFDIKKLRYYKIIIMTDAD 515
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY K L EG +Y+ PPLY+V +G+Q Y YDD E K+ +
Sbjct: 516 VDGAHIRTLLLTFFYRYMKPLITEGHVYIAQPPLYQVRKGRQKYYTYDDVEQDKLLNEIG 575
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLW+TT+NPEQR++ ++ + DA EA+ +F+ LMG +V+ R+
Sbjct: 576 RDGC-AIQRYKGLGEMNPEQLWDTTMNPEQRVMLKVELTDAVEADRLFTILMGDKVEPRR 634
Query: 539 ELIQ-NAANLVNLD 551
+ I+ NA N+ NLD
Sbjct: 635 KFIEDNAKNVSNLD 648
>gi|418618874|ref|ZP_13181726.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
gi|374826443|gb|EHR90340.1| DNA gyrase, B subunit [Staphylococcus hominis VCU122]
Length = 640
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/552 (50%), Positives = 375/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQELEVYVHRNETIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 155 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 211 DEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 269 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 329 VVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 389 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|399949942|gb|AFP65598.1| gyrB [Chroomonas mesostigmatica CCMP1168]
Length = 690
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 269/536 (50%), Positives = 368/536 (68%), Gaps = 10/536 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE + R ++ RGK + + + +S + GT + F
Sbjct: 158 LHGVGVSVVNALSEFFHINTRRIQRRCSMRFVRGKTIGEIKINQKSRNSLEINGTSVNFK 217
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD Q+F+ + +D I R+ ELAFLN L + + ED K + + + +AGG+ EY+
Sbjct: 218 PDFQIFSGSFVYDSFIIGERLNELAFLNSDLKLII--EDRRKNKIKKSIFKYAGGISEYI 275
Query: 145 QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 204
L+ K P+H ++ K+ G+ + +ALQW + S+ +L + N+I+T +GGTH++ +K
Sbjct: 276 IALSKKKSPIHPIINIDKEFKGMNMQIALQWTKEHSSENILSFVNNIKTNEGGTHLDSLK 335
Query: 205 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 264
LTRTLN G+KS K+ +LSG+ +REGL IISV++P PEFEGQTK++LGNPE+R
Sbjct: 336 VVLTRTLNYFGRKSGKFKENFPNLSGDFIREGLFGIISVKIPEPEFEGQTKSKLGNPEIR 395
Query: 265 KVVDQSVQEYLTEYLEL-HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
V+D V YL E+ E+ +PD SIL K+++A +AA AAK+A++L+R+KS L +LPG
Sbjct: 396 GVIDTVVGNYLKEFFEIQNPDACFSILEKAIAAFQAAEAAKKAKELIRRKSALEFITLPG 455
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCS P+ESEIFIVEGDSAGGSAKQ RDR FQAILPLRGKI+N+E+ DE +YKN
Sbjct: 456 KLADCSIKNPKESEIFIVEGDSAGGSAKQARDRMFQAILPLRGKIINIEKTDETKIYKNT 515
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EIQ LI ALGLG +G+ FK + LRY +III+TDADVDGAHIRTLLLTFFYRYQ+ L + G
Sbjct: 516 EIQALISALGLGTRGDLFKIDQLRYRRIIIMTDADVDGAHIRTLLLTFFYRYQRKLIENG 575
Query: 444 CIYVGVPPLYKVER-GKQVQ----YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQ 498
+Y+ PPLYK+E GK + YCY D EL+ S ++QRFKGLGEMMP Q
Sbjct: 576 FVYIACPPLYKIEDVGKNKKNFKNYCYSDGELEFFMSRMSKKI--NVQRFKGLGEMMPEQ 633
Query: 499 LWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLD 554
LWETT+NP R+LK++ + D +A+ +F+ LMG +V RKE IQ A+ + L+++D
Sbjct: 634 LWETTMNPSTRILKKVEVIDLIKADRIFNVLMGDKVFARKEFIQIHADKMRLENID 689
>gi|212637854|ref|YP_002314374.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
gi|212559334|gb|ACJ32389.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1]
Length = 640
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/553 (51%), Positives = 381/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEELEVYVHRDGNIHYQKYKRGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L V DR GT I F PD ++FT ++D++T+A R+RELAFLN + I L
Sbjct: 156 CSDLQV----VGETDRTGTTIHFKPDPEIFTETTEYDYDTLAHRLRELAFLNKGIRITL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED E N+ NEY++ GG+ YV+ LN K+ LH+ + + DGI +++ALQ+ +D
Sbjct: 211 -EDRRGE-NRRNEYYYEGGISSYVKHLNRTKETLHEEPIYIEGEKDGIQVEIALQY-NDG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N G+K+ KD+D +L+GE VREGLT
Sbjct: 268 YTSNIYSFANNIHTHEGGTHELGFKTALTRIINDYGRKNNMFKDQDANLTGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P P+FEGQTKT+LGN + R + E ++L +P V I+ K + A +A
Sbjct: 328 IISVKHPAPQFEGQTKTKLGNSDARTATESIFAEQFEKFLLENPSVAKKIVEKGILASRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR+L R+K+ L SSLPGKLADCSS P E+++VEGDSAGGSAKQGRDR FQ
Sbjct: 388 RLAAKRARELTRRKNALEVSSLPGKLADCSSRDPAICELYVVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKIII+TDADV
Sbjct: 448 AILPLRGKIINVEKSRLDKILSNNEVRAIITALGTGI-GEDFDITKARYHKIIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + ++G +Y+ PPLYK+++GK+++Y Y D +L+++ + P
Sbjct: 507 DGAHIRTLLLTFFYRYMREVIEQGYVYIAQPPLYKIQQGKRIEYAYSDRQLEEILTRLPE 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT+NPE R L ++ ++DA EA+ F LMG +V+ R++
Sbjct: 567 QPKPVIQRYKGLGEMNPEQLWETTMNPETRTLLKVSLQDAMEADETFEILMGDKVEPRRQ 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAKYVKNLD 639
>gi|169351628|ref|ZP_02868566.1| hypothetical protein CLOSPI_02409 [Clostridium spiroforme DSM 1552]
gi|169291850|gb|EDS73983.1| DNA gyrase, B subunit [Clostridium spiroforme DSM 1552]
Length = 641
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 377/553 (68%), Gaps = 13/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG Y+Q++ G +P
Sbjct: 98 IFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVNVHRDGHVYYQRFENGGQP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L V D GT + F DK +F +D++T+ RIRELAFLN L ++L
Sbjct: 156 VDKLKV----VGDSDITGTIVTFKADKLIFKEGTVYDYDTLNQRIRELAFLNKGLRLSL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDA 179
ED N+ Y + GG++EYV ++N +K P+H+ + + +D+ ITI++A+Q+ +D
Sbjct: 211 -EDQRNGINRKQVYHYEGGIKEYVSFINKNKTPIHEEIIYVEDIQQDITIEVAMQY-NDG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T +GGTH EG + +LTR +N+ K +K D +LSG+ VREGLT
Sbjct: 269 YQSNIYSFCNNINTHEGGTHEEGFRMALTRVINNYAKNKGLLKKDDETLSGDDVREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+ + L ++L +PD I+ K++ A +A
Sbjct: 329 IISVKHPDPQYEGQTKTKLGNAEVRKIASNIIATSLDKFLLENPDTAKIIVDKAIIASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+K+ L S+LPGKLADCSS P E EIFIVEGDSAGGSAK GRDRR Q
Sbjct: 389 RMAAKKAREMTRRKNPLEVSNLPGKLADCSSKDPSECEIFIVEGDSAGGSAKMGRDRRIQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE+F + LRYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKSRLEKILGNAEIRSMITAFGTGI-GEEFNLDKLRYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIR L+LTF YRY K L + G +Y PPLY ++ GK+ YCY D EL+ +K+ S
Sbjct: 508 DGGHIRILMLTFLYRYLKPLIENGFVYAAQPPLYLLKHGKEEHYCYSDEELEDLKTKIGS 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A YSIQR+KGLGEM QLWETT++P++R+L Q+ +++A EA+++F LMG +V+ R+E
Sbjct: 568 GAKYSIQRYKGLGEMNADQLWETTMDPQKRILNQIDLDEAMEADMIFDMLMGEKVEPRRE 627
Query: 540 LIQ-NAANLVNLD 551
IQ NA + +LD
Sbjct: 628 FIQENAKYVTDLD 640
>gi|392391698|ref|YP_006428300.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
gi|390522776|gb|AFL98506.1| DNA gyrase subunit B [Desulfitobacterium dehalogenans ATCC 51507]
Length = 644
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/551 (49%), Positives = 381/551 (69%), Gaps = 14/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF GS+ Y VSGGLHGVG+SVVNALS L V V +DG YHQ++ RGK T
Sbjct: 105 LTVLHAGGKFSGSA--YKVSGGLHGVGMSVVNALSTWLHVEVKKDGNIYHQEFMRGKTKT 162
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L V+ +++ GT I F PD ++F + F +T+A R+REL+FLN K++I L E
Sbjct: 163 ELA--VIGQIDQNQTGTTITFSPDPEIFEDTV-FHFDTLAHRLRELSFLNKKVSITLIDE 219
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
D ++ Y+ GG+ ++V+++N K+ LH + + F + DG+ +++++Q+ +D Y
Sbjct: 220 REDKKE----VYYHTGGIYDFVKYINRSKEALHPEPIYFEAEKDGVQVEVSMQY-NDGYV 274
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G KA+LTR N +K+ +K + +LSGE +REGLT +I
Sbjct: 275 ENLFSYANNIHTHEGGTHESGFKAALTRVANEYARKNNILKANEANLSGEDIREGLTAVI 334
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP P+FEGQTKT+LGN E+R +VD E LT +LE +P ++ KS+ A +A
Sbjct: 335 SVKVPEPQFEGQTKTKLGNSEIRSIVDSITGEGLTVFLEENPATGKKVIEKSIQASRARE 394
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+LPGKLADCS E E++IVEGDSAGGSAKQGRDRRFQAI
Sbjct: 395 AARKARELTRRKSALEVSALPGKLADCSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAI 454
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + N EI+ +I A+G G+ EDF E RYHK++I+TDADVDG
Sbjct: 455 LPLRGKILNVEKARLDRILSNAEIRAMITAMGTGI-SEDFDIEKARYHKLVIMTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIR LLLTFF+RY K L + +Y+ PPL+KV++GK + Y Y + EL K++ +
Sbjct: 514 AHIRILLLTFFFRYMKPLIENNYVYIAQPPLFKVKKGKDIHYVYSNEELAKLQDEIGRDR 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ IQR+KGLGEM QLWETT++P +R + Q+ +EDA +A+ +F+ LMG V+ R+E I
Sbjct: 574 V-EIQRYKGLGEMNAEQLWETTMDPAKRTILQVTMEDAIKADELFTILMGDVVEPRREFI 632
Query: 542 QNAANLV-NLD 551
Q+ A V NLD
Sbjct: 633 QDNAQYVRNLD 643
>gi|302340767|ref|YP_003805973.1| DNA gyrase subunit beta [Spirochaeta smaragdinae DSM 11293]
gi|301637952|gb|ADK83379.1| DNA gyrase, B subunit [Spirochaeta smaragdinae DSM 11293]
Length = 636
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/555 (49%), Positives = 384/555 (69%), Gaps = 15/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+SVVNALSE +V V RDG ++QKY RG P
Sbjct: 92 IVMTKLHAGGKFNKDT--YKVSGGLHGVGVSVVNALSEWCDVFVHRDGSIFYQKYDRGNP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V R GT RF PD ++F T ++F + ++ R+RELAFLN + I +
Sbjct: 150 ----EKDVATVGETTRHGTITRFKPDGEIFET-VEFSFDVLSRRLRELAFLNKGIRIII- 203
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
ED + + E+ F GG++ +V +L+ KKP+H + + F DGI ++ AL++ ++
Sbjct: 204 -EDERLPQKKTKEFQFEGGVKSFVSFLSESKKPIHKEPIYFEGIRDGIDLECALEY-NEG 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ + + N+I T +GGTH+ G K +LTRT N KKSK K D + SG+ VREGLT
Sbjct: 262 YSENIFSFVNNINTREGGTHLVGFKTALTRTFNDFLKKSKFAKKMDETFSGDDVREGLTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+VP+P+FEGQTK +LGN EVR VV+ V E+LT Y E +P +++ IL K A +A
Sbjct: 322 VVSVKVPDPQFEGQTKAKLGNSEVRGVVESLVAEHLTYYFEENPKLIEKILEKITMAARA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++ARDL R+KS L SSSLPGKLADC+ P +SE++IVEGDSAGGSAKQGRDR+FQ
Sbjct: 382 RIAARKARDLTRRKSALESSSLPGKLADCAEKDPSKSEVYIVEGDSAGGSAKQGRDRQFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL GK+LNVE+ + N+++Q +I LG G G++F +RYHK+II+ DADV
Sbjct: 442 AILPLWGKMLNVEKTRADKVLTNDKLQPIIATLGAGA-GKEFDISKVRYHKVIIMADADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY L + G +Y+ +PPLYK++ GK + Y YD+ + +K+ S +
Sbjct: 501 DGSHIRTLLLTFFFRYMPELVERGYVYIAMPPLYKMQLGKSITYAYDERDREKIMKSLFA 560
Query: 480 NAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+IQR+KGLGEM P QLWETT++P+ R + Q+ +EDA EA+ +FS+LMG V+ R
Sbjct: 561 EETEKVAIQRYKGLGEMNPNQLWETTMDPDSRKIMQVRLEDAVEADQIFSTLMGEDVEPR 620
Query: 538 KELIQNAANLV-NLD 551
++ I++ A +V NLD
Sbjct: 621 RKFIEDNALMVSNLD 635
>gi|189345573|ref|YP_001942102.1| DNA gyrase subunit B [Chlorobium limicola DSM 245]
gi|189339720|gb|ACD89123.1| DNA gyrase, B subunit [Chlorobium limicola DSM 245]
Length = 643
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/553 (49%), Positives = 368/553 (66%), Gaps = 18/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG Y Q+Y RG P
Sbjct: 99 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAYFQRYERGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT+ F PD ++F T +F + I R+RELAFLN L I ++
Sbjct: 157 ----QGDVKEIGPSDLRGTKTTFKPDHEIFKTT-EFRRDIIIDRMRELAFLNKTLRITVQ 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDA 179
D + E + + GGL E+VQ+ + ++ K L + V + D ++LALQ+ +D+
Sbjct: 212 DSDGNEEV-----FHYEGGLNEFVQFTDQNRIKLLKEPVYIYGERDSTIVELALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL+G+ +EGLT
Sbjct: 266 YQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLSLTGDDFKEGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN E + +V+ V E L E+LE +P+VL I+ K A +
Sbjct: 326 VISVKVAEPQFEGQTKTKLGNSETQSIVESIVNEQLAEFLESNPNVLKLIIEKVKGAAMS 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 REAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+TDADV
Sbjct: 446 AILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSPEKLRYGKIIIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-- 477
DGAHIRTLLLTFF+RY ++L + G +++ PPLY V+ GK QY +DD E V S
Sbjct: 506 DGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLVKSGKDQQYAWDDDERNAVIESLRK 565
Query: 478 --PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
A IQR+KGLGEM P QLW TT++P R L Q+ +E+A EA+ VFS+LMG +V+
Sbjct: 566 MQKGKANVHIQRYKGLGEMNPEQLWSTTMDPAHRSLLQVSVENAMEADKVFSTLMGDKVE 625
Query: 536 TRKELIQNAANLV 548
R++ I+ A V
Sbjct: 626 PRRDFIEKNARYV 638
>gi|333372855|ref|ZP_08464776.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Desmospora sp. 8437]
gi|332971209|gb|EGK10172.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Desmospora sp. 8437]
Length = 641
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 274/554 (49%), Positives = 377/554 (68%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + GY SGGLHGVG+SVVNALSE LEV V R+G + Q+Y +G P
Sbjct: 99 VVMTVLHAGGKF--DNEGYKFSGGLHGVGVSVVNALSEWLEVQVKREGKIHVQRYRKGVP 156
Query: 61 VTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ L V K ++ GTRI F PD ++FT ++D+ + R+RELAFLN L I L
Sbjct: 157 ESDLQ-----VTGKTKETGTRITFKPDPEIFTETTEYDYEILQNRLRELAFLNQGLRIML 211
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSD 178
E + + NE+ + GG+ +V+ LN +++ LH F + + + + +ALQ+ +D
Sbjct: 212 SDERGE---GKSNEFKYDGGIRSFVEHLNKNRESLHQPPIFIEGEKEELVVQIALQY-ND 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+S + YAN+I T +GGTH G K++LTR +N ++ +K+ D +LSG+ REGLT
Sbjct: 268 GFSSNLYSYANNIHTHEGGTHEAGFKSALTRVINDYARRHNLLKENDNNLSGDDTREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IIS+++P+P+FEGQTKT+LGN E R V + E +LE +P V +++K++ A +
Sbjct: 328 AIISIKIPDPQFEGQTKTKLGNSEARTVTESIFAEQFLAFLEENPAVSKKVINKAVMAAR 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR+L R+K+ L SSLPGKLADC+S E SE+++VEGDSAGG+AKQGRDR F
Sbjct: 388 AREAARKARELTRRKNALEVSSLPGKLADCTSRKAEISELYLVEGDSAGGTAKQGRDRMF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ NEEI+ + ALG G+ GEDF+ E RYHKI+I+TDAD
Sbjct: 448 QAILPLRGKILNVEKARLDKALSNEEIRTITTALGTGI-GEDFQLEKARYHKIMIMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L + G +Y+ PPLYK+ +GK+V Y +DD E ++ S
Sbjct: 507 VDGAHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKITQGKKVLYAFDDREKDRIVSELE 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+QR+KGLGEM QLWETT++PE R L Q+ +EDA +A+ VF +LMG +V+ R+
Sbjct: 567 DKGKVELQRYKGLGEMTATQLWETTMDPESRTLLQVSLEDALDADQVFETLMGEKVEPRR 626
Query: 539 ELIQNAANLV-NLD 551
E IQ A V NLD
Sbjct: 627 EFIQEYAKQVRNLD 640
>gi|307352947|ref|YP_003893998.1| DNA gyrase subunit B [Methanoplanus petrolearius DSM 11571]
gi|307156180|gb|ADN35560.1| DNA gyrase, B subunit [Methanoplanus petrolearius DSM 11571]
Length = 640
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/558 (51%), Positives = 391/558 (70%), Gaps = 19/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE L+V V+RDG Y ++RG
Sbjct: 94 VVMTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSEFLQVEVFRDGYIYDMGFARGGL 151
Query: 61 VTTLTC--HVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
+ LT + P D+ ++ GT+I F PD +F T + FD++ ++ R+RELAFLN +TI
Sbjct: 152 KSDLTSRKNAAP-DAFEKHGTKISFKPDALIFET-VTFDYDILSHRMRELAFLNRGITI- 208
Query: 119 LRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGF-RKDVDGIT-IDLALQ 174
E SD E++ Y + F + GG+ E+V +L T K+ +H DV+ F KD +T +++ALQ
Sbjct: 209 ---EISD-ERSGYADIFNYEGGISEFVTYLITGKETVHPDVIYFDTKDAASMTEVEVALQ 264
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ S AYS+TM+ + NS+ T +GGTH+EG +++LTR +N K + +K SL GE VR
Sbjct: 265 Y-STAYSETMMTFVNSVNTREGGTHLEGFRSALTRAINKSAKDNNLMKGMSESLKGEDVR 323
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGL +IS++V NP+FEGQTK RLGN V+ +VD V + LTEY E +P V+ +I+SK++
Sbjct: 324 EGLVTVISLKVANPQFEGQTKMRLGNSNVKGIVDSLVYQSLTEYFEENPKVIQAIVSKAV 383
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AA++AR+L R+KS L S LPGKLADCS P +SEI+IVEGDSAGGSAKQGR
Sbjct: 384 GAARAREAARKARELARRKSTLESGGLPGKLADCSERDPSKSEIYIVEGDSAGGSAKQGR 443
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
R+FQAILPLRGKILNVE+ + + KN EIQ LI A+G G GE F E RYH II +
Sbjct: 444 SRQFQAILPLRGKILNVEKANPHRILKNAEIQTLISAIGCGF-GESFDVEKARYHHIIFM 502
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHI TLLLTFFYRY L ++G IY+ PPL++V +GK +Y + + E+K+
Sbjct: 503 TDADVDGAHICTLLLTFFYRYMPELIEKGYIYIAQPPLFRVAKGKNEKYAFSEEEMKRYV 562
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
F + S+QR+KGLGEM QLW TT+ PE R+LKQ+ + +A+ A+ +FS LMG V
Sbjct: 563 KEFGDKGV-SVQRYKGLGEMNADQLWHTTMAPESRVLKQVSVIEASYADEIFSKLMGDDV 621
Query: 535 DTRKE-LIQNAANLVNLD 551
+ RKE +I+++ + NLD
Sbjct: 622 EARKEFIIRHSKEVTNLD 639
>gi|336252328|ref|YP_004595435.1| DNA gyrase subunit B [Halopiger xanaduensis SH-6]
gi|335336317|gb|AEH35556.1| DNA gyrase, B subunit [Halopiger xanaduensis SH-6]
Length = 646
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/551 (47%), Positives = 373/551 (67%), Gaps = 12/551 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + +G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRHAFEQGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT +RFWPD +F A +F +T+A R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEETGTEVRFWPDTGIFE-AGEFSFSTLANRLRELAFLNSGVRITLR 209
Query: 121 KE-----DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQ 174
E D+D E Y + GG+ E+V++LN + +HD V+ F + I +++A+Q
Sbjct: 210 DEREDAGDADEEGPVEETYEYEGGIREFVEYLNETRSAMHDDVIYFEDEEQNIQVEVAMQ 269
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
++ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L GE +R
Sbjct: 270 -ATEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENSMLSDLDNNLKGEDIR 328
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E +PD ++I++K++
Sbjct: 329 EGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEENPDTAEAIINKAV 388
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R
Sbjct: 389 EAAKARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQAR 448
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQA+LP+RGK+LNVE+ + +N++I+N+I A+G GV G++F E +RY K+I+
Sbjct: 449 NPEFQAVLPIRGKVLNVEKHRLDRVLENDQIRNIITAIGAGV-GDEFDLEDVRYKKVIMA 507
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + D E ++
Sbjct: 508 TDADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDQERDEII 567
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ +QRFKGLGEM P QLW+TT++P R+LKQ+ +EDAA A+ +FS LMG V
Sbjct: 568 EEKCDGSPSQVQRFKGLGEMNPQQLWDTTMDPSNRILKQITVEDAAAADKMFSVLMGDAV 627
Query: 535 DTRKELIQNAA 545
+ RK+ I+ A
Sbjct: 628 EPRKQFIKENA 638
>gi|147676340|ref|YP_001210555.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
gi|146272437|dbj|BAF58186.1| type IIA topoisomerase, B subunit [Pelotomaculum thermopropionicum
SI]
Length = 643
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/529 (52%), Positives = 371/529 (70%), Gaps = 14/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS LEV V RDG Y+Q+YSRG PVT L L GT++ F
Sbjct: 126 LHGVGVSVVNALSLWLEVEVKRDGKVYYQRYSRGIPVTGL----LVKGKSSATGTKVTFM 181
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F I F+ + +A R+REL+FLN + I L+ D Q + GG+ ++V
Sbjct: 182 PDPEIFEDLI-FNQDILAQRLRELSFLNMGVKIILK----DRRSGQETVFQHDGGIMDFV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN K PLH + +K D + +++ALQ+ +D Y +++L YAN+I TIDGGTH G
Sbjct: 237 RYLNKSKTPLHGKPIYIQKQKDDVLVEVALQY-TDTYVESILSYANNINTIDGGTHEAGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA+LTR +N G+K +K+ +LSGE +REGLT +ISV+VP P+FEGQTKT+LGN EV
Sbjct: 296 KAALTRVINDYGRKYNLLKNGAGNLSGEDIREGLTAVISVKVPEPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD V E L +LE +P + IL K+++A +A AA++AR+L R+KS L S+LPG
Sbjct: 356 RSIVDSVVGEGLGIFLEENPSIARRILEKAVTASRAREAARKARELTRRKSALEGSTLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCS P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NE
Sbjct: 416 KLADCSERDPSVSELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I ALG G+ GE+F RYHKII+++DADVDGAHIRTLLLTFFYRY + L ++G
Sbjct: 476 EIRAMITALGTGI-GEEFDVSKARYHKIILMSDADVDGAHIRTLLLTFFYRYMRPLIEKG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+++ PPLY+V++GK +Y Y DAEL+K+ + + SIQR+KGLGEM QLWETT
Sbjct: 535 YVFIAQPPLYRVKKGKLEKYAYSDAELEKLLDQIGRDGV-SIQRYKGLGEMNAEQLWETT 593
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
++PE R + Q+ +EDA EA+ VFS LMG RV+ R++ IQ A LV NLD
Sbjct: 594 MDPETRTVMQVNLEDAIEADAVFSMLMGDRVEPRRDFIQENARLVRNLD 642
>gi|357058348|ref|ZP_09119202.1| B subunit [Selenomonas infelix ATCC 43532]
gi|355374201|gb|EHG21502.1| B subunit [Selenomonas infelix ATCC 43532]
Length = 684
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 375/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG + ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSEMDVQVRRDGKIHAISFTRG-- 198
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 199 VTQEKLH--EIGASETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNHGITITLV 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + E+ + + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 DERGEAERRE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGEDVREGLTC 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P + +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|188584649|ref|YP_001916194.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349336|gb|ACB83606.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 640
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 384/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T LHAGGKF S+ Y VSGGLHGVG+SVVN LS+ + V V+RDG Y Q+Y +G P
Sbjct: 99 VIMTYLHAGGKF--SNDSYKVSGGLHGVGISVVNGLSKWIRVKVYRDGKVYQQEYEKGYP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D++GT I F PD+++F T ++FD+ + R+++LAFLN ++I +
Sbjct: 157 KTEIK----EIGESDKRGTEIIFLPDEEIFET-VEFDYQVLRNRLQQLAFLNRGVSITIS 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D K ++ + + GG++ +V++LN +K L V + +G +++A+Q+ +D
Sbjct: 212 DEREDEFKEEH--FKYEGGIKSFVEYLNENKTTLFTPPVYIEGEQEGCKLEVAIQY-NDG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + YAN+I T +GGTH G K SLTRT+N ++ +K+ D +L+GE +REG+T
Sbjct: 269 YQEMIHSYANNINTHEGGTHESGFKISLTRTVNDYARRHNLLKNGDKNLTGEDIREGITA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+V +P+FEGQTKT+LGN EVR++V+ V E+L YLE +P V I++K+++A +A
Sbjct: 329 IISVKVEDPQFEGQTKTKLGNSEVRRIVEGIVSEHLESYLEENPAVGKKIVNKAINASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+K+ L ++LPGKLADC++ +SE+++VEGDSAGGSAKQGRDR FQ
Sbjct: 389 REAARKAKELTRRKNALEVTALPGKLADCTTKDASKSELYLVEGDSAGGSAKQGRDREFQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + NEEI+ +I A+G G+ GE+F RY +III+TDADV
Sbjct: 449 AILPLRGKILNVEKARFDKILANEEIKTIITAIGTGI-GEEFDISKARYQRIIIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPLY V++ + Y ++D EL +
Sbjct: 508 DGAHIRTLLLTFFYRYMRPLIEHGYVYIAQPPLYMVKKKGKHYYTFNDHELDNLLEEIGK 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ S+QR+KGLGEM P QLWETT+NPE R + + ++DA EA+ +F+ LMG +V R++
Sbjct: 568 EGI-SLQRYKGLGEMNPTQLWETTMNPESRTVLNVNLQDAIEADKIFTVLMGEKVSPRRK 626
Query: 540 LI-QNAANLVNLD 551
I +NA ++ NLD
Sbjct: 627 FIEENARDVRNLD 639
>gi|158319065|ref|YP_001511572.1| DNA gyrase subunit B [Alkaliphilus oremlandii OhILAs]
gi|158139264|gb|ABW17576.1| DNA gyrase, B subunit [Alkaliphilus oremlandii OhILAs]
Length = 636
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 375/552 (67%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE LE T+ DG Y Q++ RG PV
Sbjct: 97 VLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEYLEATIKLDGKVYWQRFERGNPV 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ + +GT I F PD ++F + F + T+ R+RELAFLN + I L
Sbjct: 155 EDIKI----IGETKEKGTTILFKPDAEIFEETV-FQYETLEYRLRELAFLNKGIKIVLI- 208
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
D K Q +++ GG+ EYV++LN +K LH+ ++ F K+ + +++A+Q+ +D Y
Sbjct: 209 -DKREGKEQEKVFYYDGGIMEYVKYLNKNKSVLHEKIIHFEKEKETSVVEVAMQY-TDTY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + YAN+I T +GGTH+ G +ASLTR +N KK+ +K+KD + GE +REGLT +
Sbjct: 267 TENIFSYANNINTHEGGTHLSGFRASLTRIVNDYAKKAGFLKEKDANFLGEDIREGLTAV 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++ P+FEGQTKT+LGN E+R +V+ SV E L +LE +P I+ KSL A +A
Sbjct: 327 ISVKLTEPQFEGQTKTKLGNSEMRGIVENSVSEALEAFLEENPSDAKIIVEKSLRAQRAR 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+K L S +LPGKLADCS P SEI+IVEG+SAGGSAKQGRDR QA
Sbjct: 387 EAAKKARELTRRKGALESMALPGKLADCSEKDPALSEIYIVEGNSAGGSAKQGRDRSIQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ M ++EI+N+I A G + GE+F E LRYHKI+I+TDADVD
Sbjct: 447 ILPLRGKILNVEKARLDKMLNSDEIRNMITAFGTSI-GEEFDIEKLRYHKIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +R+ K L + G IY+ PPLYK+++GK +Y Y + E++ S N
Sbjct: 506 GAHIRTLLLTFLFRFMKPLIERGYIYIAQPPLYKLKKGKVEEYAYSEEEMQVKLSEMGGN 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
IQR+KGLGEM P QLWETT+NPE R Q+ IEDAA A+ +F++LMG +V+ R+E
Sbjct: 566 V--DIQRYKGLGEMNPEQLWETTMNPETRTFLQVTIEDAAAADNIFTTLMGDKVEPRREF 623
Query: 541 I-QNAANLVNLD 551
I QN+ + NLD
Sbjct: 624 IEQNSKYVTNLD 635
>gi|420169307|ref|ZP_14675909.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
gi|394231515|gb|EJD77142.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM087]
Length = 643
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMMQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|330507223|ref|YP_004383651.1| DNA gyrase subunit B [Methanosaeta concilii GP6]
gi|328928031|gb|AEB67833.1| DNA gyrase, B subunit [Methanosaeta concilii GP6]
Length = 630
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 385/553 (69%), Gaps = 19/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE +EV V R+G Y Q++ +GK
Sbjct: 94 IVLTVLHAGGKFDHES--YGVSGGLHGVGVSVVNALSEWMEVQVRRNGRIYWQRFEKGKV 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L S D GT I F PD +F +F +T++ R+RELAFLN L I ++
Sbjct: 152 VSDLEER----GSSDHTGTTITFKPDTSIFEET-EFSFDTLSSRLRELAFLNRGLKITIK 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ SD E N + +AGG+ +V++LN +K+ LH+ V F + +G +++ALQ+ +++
Sbjct: 207 DDRSDKE----NIFQYAGGIISFVEYLNKNKEVLHEQPVYFSRSKNGTQVEVALQY-NNS 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + YAN I T +GGTH+ G +A+LTRT+N + +K K+ ++ L GE +REGL
Sbjct: 262 YAENIFSYANIINTREGGTHLMGFRAALTRTVNDYARNNKLFKN-EMKLGGEDLREGLVA 320
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++P+P+FEGQTKTRLGN +R +V+ V E L EY E +P V +I+ K+ A++A
Sbjct: 321 VISVKLPDPQFEGQTKTRLGNSSIRGIVESMVAEGLGEYFEENPLVATTIVEKAAEAMRA 380
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+K+ L S LPGKLADCS P + EI+IVEG+SAGGSAKQGR+R FQ
Sbjct: 381 REAARKAKELTRRKNALSSGGLPGKLADCSDNDPAKCEIYIVEGESAGGSAKQGRNRHFQ 440
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVER + KN EI+N+I A G GV G+DF RYHK++I+TDADV
Sbjct: 441 AILPLRGKILNVERARLDKILKNAEIRNMIVAFGTGV-GDDFDISKARYHKVVIMTDADV 499
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFFYRY + L D G +++ PPLY+V++GKQ Y Y D +L ++ +
Sbjct: 500 DGSHIRTLLLTFFYRYMRPLIDAGYVFIAQPPLYQVKKGKQANYAYSDEQLNELVAGMNK 559
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT++PE R++ ++ +EDA EA+ +F+ LMG +V+ R+E
Sbjct: 560 PV---IQRYKGLGEMNPEQLWETTMDPEGRIMLRVTLEDAVEADRIFTILMGDQVEPRRE 616
Query: 540 LIQNAANLV-NLD 551
I+ A V NLD
Sbjct: 617 FIEKHAKYVKNLD 629
>gi|239637290|ref|ZP_04678277.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
gi|239597127|gb|EEQ79637.1| DNA gyrase, B subunit [Staphylococcus warneri L37603]
Length = 640
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/552 (50%), Positives = 369/552 (66%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNDTIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D +FT +++ T+ RIRELAFLN + I L
Sbjct: 155 QFDLK----EIGSTDKTGTAIRFKADSSIFTETTVYNYETLQQRIRELAFLNKGIQITLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + + Q + Y + GG++ YV+ LN +K+P+H + + + D I +++A+Q+ +
Sbjct: 211 DERDEDDIRQ-DSYHYEGGIKSYVEMLNENKEPIHGEPIYIHQSKDDIEVEIAIQY-NKG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REGLT
Sbjct: 269 YSTNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGMNSKIIKEDKDRLSGEDTREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 329 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPSVGRIIVEKGIMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD Q
Sbjct: 389 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSSTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 568 TPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVTLEDAIDADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|423484484|ref|ZP_17461173.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-2]
gi|401137945|gb|EJQ45520.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-2]
Length = 642
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/555 (50%), Positives = 382/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + DR GT RF PD+++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGETDRTGTITRFKPDEEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|420218947|ref|ZP_14723991.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04008]
gi|394291351|gb|EJE35167.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04008]
Length = 588
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 46 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 103
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 104 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 159
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 160 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 216
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 217 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 276
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 277 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 336
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 337 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 396
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 397 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 455
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 456 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 515
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 516 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 575
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 576 FIEDNAVYANLD 587
>gi|108802861|ref|YP_642798.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
gi|108764104|gb|ABG02986.1| DNA gyrase subunit B [Rubrobacter xylanophilus DSM 9941]
Length = 644
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/553 (48%), Positives = 378/553 (68%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T LHAGGKF G + Y VSGGLHGVG SVVNALSE LE+ + RDG + Q+Y RG P
Sbjct: 101 VIMTTLHAGGKFDGQT--YKVSGGLHGVGASVVNALSEWLELEIRRDGHLWTQRYERGFP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + ++ GT +RF PD Q+F T ++F +T++ R RE AFLN L I L
Sbjct: 159 VTGLE-RGRKLGKREGTGTTVRFRPDPQIFET-VEFSFDTLSRRFRESAFLNKGLRIRLA 216
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + Y + GG++++V +N K P+H ++ F ++ + +++A+QW S
Sbjct: 217 DER---EEGREVVYRYEGGIKDFVAHINEAKDPVHKTILYFHREEEAGDVEVAMQWNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y D++ +AN+I T +GGTH+ G +A+LTRT+N ++ +K+K+ +L+G+ +REGL
Sbjct: 273 YQDSVFTFANNINTHEGGTHLSGFRAALTRTINEYARQKGLLKEKEENLTGDDIREGLAA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ P+FEGQTKT+LGN E++ +V+ + +L E+LE +P +I++K+++A +A
Sbjct: 333 VISVKLREPQFEGQTKTKLGNTEIKGLVESATNRHLAEFLEENPGQARAIVTKAINASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAA +AR +R K L SS+LPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 393 RLAASKARKAIR-KGYLESSTLPGKLADCSSKDPARSELYIVEGDSAGGSAKQGRDRNFQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + + N EIQ +I A+G GV G+ F E RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKANINKVLSNAEIQAMISAIGAGV-GDSFNIEEARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTL+LTF YR L + G +Y+ PPLYK+ ++ Y Y DAEL++ +
Sbjct: 511 DGSHIRTLVLTFLYRNMPELIEAGYVYIAQPPLYKITHNRRDVYVYSDAELQETLRRLRA 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ ++ RFKGLGEM P QLWETT++P R L Q+ I+ AA A+ +F++LMG +V+ RK
Sbjct: 571 DGSATVSRFKGLGEMNPQQLWETTMDPANRTLLQVTIDSAATADELFTALMGDKVEPRKA 630
Query: 540 LIQ-NAANLVNLD 551
I+ NA N+D
Sbjct: 631 FIEANAREAKNID 643
>gi|338731010|ref|YP_004660402.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
gi|335365361|gb|AEH51306.1| DNA gyrase subunit B [Thermotoga thermarum DSM 5069]
Length = 630
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/556 (48%), Positives = 374/556 (67%), Gaps = 17/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG SVVNALSE +EV V RDG+ Y+Q YSRGKP
Sbjct: 91 VVMTTLHAGGKF--SKDAYKVSGGLHGVGASVVNALSEKMEVWVHRDGLIYYQAYSRGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ C V V +++GT +RF PD ++F+T ++FD + I ++RELA+LN L I
Sbjct: 149 L----CEVTVVGKTNKRGTIVRFKPDPEIFST-VEFDPDIIQTKLRELAYLNVGLKIIF- 202
Query: 121 KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
+ + N Y E Y + GG+ EYV++L ++K LH+V+ + + + +D+A+ +
Sbjct: 203 ----EDKINGYTEVYQYKGGISEYVRYLAGNRKMLHEVIRISGEWEDVKVDVAMVYTDSQ 258
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
D + YAN+IRT+D GTH+ K ++T+ N K +K KD S GE VREGL
Sbjct: 259 EQDLIYSYANTIRTVDHGTHVTAFKNAITKLFNEYAKSLGILK-KDESFQGEDVREGLIA 317
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV + NPEFEGQTK +LG+ V + V+E LTEY E++ L IL + A++A
Sbjct: 318 VVSVLLKNPEFEGQTKAKLGSEIAGVAVSKVVREKLTEYFEINKATLKIILERIAQAMRA 377
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+ARDLVR+K+ L +S+LPGKLADC ST E+SE+FIVEGDSAGGSAKQ RDR FQ
Sbjct: 378 REAAKKARDLVRRKNALENSALPGKLADCVSTDLEKSELFIVEGDSAGGSAKQARDREFQ 437
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LP+RGKILNVE+ + NE+I+++I A+G G+ G+ F + LRY KIII+TDAD+
Sbjct: 438 AVLPIRGKILNVEKSSIHKLLNNEQIKDIIVAIGTGI-GDKFDRSRLRYGKIIIMTDADI 496
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+RY + L +EG +++ VPPLYKV ++ Y Y + E +K KS
Sbjct: 497 DGAHIRTLLLTFFFRYMRPLIEEGRVFIAVPPLYKVSVNGKIYYLYSEEEYEKFKSQLKE 556
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QR+KGLGEM P QLWETT+NP+ R + ++ IEDA EA+ +F+ LMG R+
Sbjct: 557 GTKIEVQRYKGLGEMNPEQLWETTMNPQTRKMIKVTIEDAEEADTLFNILMGENTAERRS 616
Query: 540 LIQNAANLVNLDHLDI 555
I+ A + + +LD+
Sbjct: 617 FIERHA--LKVTYLDV 630
>gi|312142414|ref|YP_003993860.1| DNA gyrase subunit B [Halanaerobium hydrogeniformans]
gi|311903065|gb|ADQ13506.1| DNA gyrase, B subunit [Halanaerobium hydrogeniformans]
Length = 640
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/554 (49%), Positives = 389/554 (70%), Gaps = 13/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGK 59
+++T LHAGGKFGG GY VSGGLHGVG+SVVNAL+E +EV + W+DG Y QKY RG
Sbjct: 96 VVMTTLHAGGKFGGE--GYKVSGGLHGVGISVVNALTEWMEVEIAWKDGKVYKQKYERGV 153
Query: 60 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
P L + DS D GT I F D Q+F I +++ +A R++ELAFLN L I +
Sbjct: 154 PQHELRA-IGSCDS-DCTGTTIEFKADPQIFE-EIDYEYRNLAQRLKELAFLNKGLKIKI 210
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
DS ++ + +EY + GGL +V++LN KKPL+ D + + + ++++A+Q+
Sbjct: 211 I--DSRVDETKEDEYQYDGGLVSFVKYLNQSKKPLYPDPIYLETEGEEGSLEVAIQY-HQ 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y+ ++ +AN+I T +GGTH+ G K+++TRT N +K +KD D + G+ +REG+T
Sbjct: 268 GYNSSIFSFANNINTKEGGTHLSGFKSAITRTFNDYARKKNILKDSDDNFKGQDIREGMT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV++ +P+FEGQTKT+LGN E+R VD +V +L +LE +P + I+ K+LSA +
Sbjct: 328 AIISVKLADPQFEGQTKTKLGNSEMRGFVDSAVSSFLKTFLEENPKIAKVIVDKALSAAR 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++ARDL R+KS L S++LPGKLADC+ +++E++IVEGDSAGGSAKQGR+R F
Sbjct: 388 ARKAARKARDLTRRKSALTSTALPGKLADCAKRQAKDTEVYIVEGDSAGGSAKQGRNREF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + N+EI+ LI A+G GV E+F LRY +III+TDAD
Sbjct: 448 QAILPLKGKILNVEKSRLNKILNNDEIRALITAIGTGV-AEEFDINNLRYERIIIMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
+DGAHIRTLLLTFFYRY + L + G IY+ PPLYKV++G++ +Y Y+D LK++
Sbjct: 507 IDGAHIRTLLLTFFYRYMRPLLENGNIYIAQPPLYKVKKGRKEEYVYNDKALKELLDEIG 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + S+QR+KGLGEM P QLW+TT++P+ R+L Q+ IEDA A+ FS LMG +V+ R+
Sbjct: 567 RDRV-SMQRYKGLGEMNPGQLWDTTMDPDNRILLQVNIEDAILADETFSILMGDKVEPRR 625
Query: 539 ELIQ-NAANLVNLD 551
+ IQ NAA + NLD
Sbjct: 626 KFIQENAAQVKNLD 639
>gi|433590818|ref|YP_007280314.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|448331776|ref|ZP_21521027.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
gi|433305598|gb|AGB31410.1| DNA gyrase, B subunit [Natrinema pellirubrum DSM 15624]
gi|445628735|gb|ELY82038.1| DNA gyrase subunit B [Natrinema pellirubrum DSM 15624]
Length = 643
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/548 (47%), Positives = 374/548 (68%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRHAFEGGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++S + GT+I+FWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMESDEETGTQIQFWPDTGIFETG-EMSFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
+E++D Y + GG+ E+V++LN + +H DV+ F + I I++A+Q +
Sbjct: 210 DEREETDDGDVVSETYEYDGGIREFVEYLNETRSAMHEDVIYFEDEEQSIQIEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L+GE +REGL
Sbjct: 269 QELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLSDLDNNLTGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +SI++K++ A
Sbjct: 329 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAESIVNKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNPD 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 449 LQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE ++ +
Sbjct: 508 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDEIVAEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I+ A
Sbjct: 628 KQFIKEHA 635
>gi|410453633|ref|ZP_11307580.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
gi|409932961|gb|EKN69911.1| DNA gyrase subunit B [Bacillus bataviensis LMG 21833]
Length = 640
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 383/553 (69%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++ K+ RG
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVYVHRDGKIHYIKFERGAV 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + + D GT F PD ++FT ++++++ +A RIRELAFLN L I +
Sbjct: 156 VKELAV----IGTTDHTGTITHFKPDSEIFTETLEYEYDILATRIRELAFLNRGLKITI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED E N+ NEY + GG++ YV+ LN K+ +HD + + DGI++++ALQ+ ++
Sbjct: 211 -EDKRVE-NKRNEYHYEGGIKSYVEHLNRTKEVIHDEPIYMEGEKDGISVEVALQY-NEG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+D + +AN+I T +GGTH G K +LTR +N +K+ +K+ D +LSGE VREG+T
Sbjct: 268 YTDNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNGLIKENDTNLSGEDVREGITA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ P+P+FEGQTKT+LGN EVR + D +++ +P V I+ K L A +A
Sbjct: 328 IVSIKHPDPQFEGQTKTKLGNSEVRAITDTVFASTFDKFMLENPTVAKKIVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L SSLPGKLADCSS P ESE+FIVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RLAAKKARELTRRKSALEVSSLPGKLADCSSKDPAESEMFIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I A+G G+ GEDF RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDRILSNLEVRAMITAIGTGI-GEDFDIAKARYHKVVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYKV++GK+++Y Y+D EL+++ + P+
Sbjct: 507 DGAHIRTLLLTFFYRFMRKLIEAGYVYIAQPPLYKVQQGKRIEYAYNDKELERIFAELPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+IQR+KGLGEM P QLW+TT+NPE R + Q+ +EDA EA+ F LMG +V+ R+
Sbjct: 567 TPKPNIQRYKGLGEMNPEQLWDTTMNPEGRSMLQVSLEDAIEADETFDMLMGEKVEPRRN 626
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 FIEENAQYVKNLD 639
>gi|218961619|ref|YP_001741394.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans]
gi|167730276|emb|CAO81188.1| DNA gyrase subunit B [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 632
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/554 (48%), Positives = 382/554 (68%), Gaps = 18/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y V+GGLHGVG+SVVNALSE LEV +++DG EY ++ RG P
Sbjct: 93 VVLTVLHAGGKFDDKS--YKVAGGLHGVGVSVVNALSEFLEVNIFKDGKEYFMRFERGLP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
VT L + ++ GT + F PD +F TT FD+ + R+RELAFLN L I L
Sbjct: 151 VTELQV----LGDTNKTGTVVTFRPDPLIFETTEFSFDY--LTSRLRELAFLNSGLRIIL 204
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSD 178
+ E S + +++ + GG++ +V++LN +KKPL + V +G+ ++ALQ+ ++
Sbjct: 205 KDERS----GRVHDFKYEGGIKSFVEYLNQNKKPLFPNPIYISSVKEGMEFEVALQY-NE 259
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y + + +AN+I T +GGTH+ G K+ LTR +N+ K + +K++ +S SGE +REGLT
Sbjct: 260 GYQENIFSFANNINTTEGGTHLSGFKSGLTRAVNTYIKNADLLKNEKVSPSGEDIREGLT 319
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+IS+++ NP+FEGQTKT+L N EV +V+ +V E L EY E HP +I KS+ A +
Sbjct: 320 AVISLKIANPQFEGQTKTKLQNSEVEGIVNSAVYEKLMEYFEEHPAEAKNITMKSILAAR 379
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
+ AA++AR+L R+K+VL S SLPGKLADC+ + PE++E+F+VEGDSAGGSAKQGRDR F
Sbjct: 380 SREAARKARELTRRKTVLESGSLPGKLADCTLSDPEKTELFLVEGDSAGGSAKQGRDRSF 439
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL GK+LN E+ + N++IQ +I ALG G+ G++F LRYHKIII+ DAD
Sbjct: 440 QAILPLWGKMLNTEKARVDKVLNNDKIQPIILALGAGI-GQEFDISKLRYHKIIIMADAD 498
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDG+HI TLL+TFFYRY + + +EG +Y+ +PPL++V +GKQ Y Y++ E K F
Sbjct: 499 VDGSHIATLLMTFFYRYMRPVIEEGKLYIAMPPLFQVRKGKQKVYVYNEEERDKAIREFG 558
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QR+KGLGEM QLWETTL+P+ R + + ++DA EA+ +F+ LMG V+ R+
Sbjct: 559 EKGVL-VQRYKGLGEMNAEQLWETTLDPKNRKMIAIKMDDAIEADRMFTILMGDEVEPRR 617
Query: 539 ELIQ-NAANLVNLD 551
E IQ NA + NLD
Sbjct: 618 EFIQENARYVKNLD 631
>gi|418328445|ref|ZP_12939557.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
gi|365231970|gb|EHM72986.1| DNA gyrase, B subunit [Staphylococcus epidermidis 14.1.R1.SE]
Length = 643
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEIREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|242243251|ref|ZP_04797696.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|416127533|ref|ZP_11596941.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|418631677|ref|ZP_13194129.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|420176465|ref|ZP_14682885.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|420178304|ref|ZP_14684636.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|420180889|ref|ZP_14687098.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|420192455|ref|ZP_14698314.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|420200868|ref|ZP_14706507.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
gi|242233200|gb|EES35512.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144]
gi|319399910|gb|EFV88156.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909]
gi|374834345|gb|EHR97993.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU128]
gi|394241009|gb|EJD86430.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM061]
gi|394246494|gb|EJD91750.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM057]
gi|394248368|gb|EJD93606.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM053]
gi|394261185|gb|EJE05985.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM023]
gi|394267464|gb|EJE12054.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM031]
Length = 643
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|27466922|ref|NP_763559.1| DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57865927|ref|YP_190090.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251811368|ref|ZP_04825841.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|282874725|ref|ZP_06283604.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|293367576|ref|ZP_06614229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417647460|ref|ZP_12297298.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|417656803|ref|ZP_12306482.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|417659128|ref|ZP_12308738.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|417909208|ref|ZP_12552947.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|417911948|ref|ZP_12555645.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|417912698|ref|ZP_12556384.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|418325276|ref|ZP_12936483.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|418604519|ref|ZP_13167866.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|418608801|ref|ZP_13171981.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|418612386|ref|ZP_13175430.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|418617359|ref|ZP_13180257.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|418621984|ref|ZP_13184746.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|418624284|ref|ZP_13186961.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|418626542|ref|ZP_13189140.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|418664988|ref|ZP_13226448.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|419769996|ref|ZP_14296084.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|420172895|ref|ZP_14679392.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|420181842|ref|ZP_14688001.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|420186258|ref|ZP_14692330.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|420188871|ref|ZP_14694872.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|420194332|ref|ZP_14700147.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|420197594|ref|ZP_14703317.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|420207785|ref|ZP_14713271.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|420215373|ref|ZP_14720642.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|420216527|ref|ZP_14721734.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|420222776|ref|ZP_14727691.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|420224635|ref|ZP_14729475.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|420227733|ref|ZP_14732497.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|420230696|ref|ZP_14735375.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|420233032|ref|ZP_14737654.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|421608632|ref|ZP_16049848.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
gi|38604835|sp|Q8CQK4.1|GYRB_STAES RecName: Full=DNA gyrase subunit B
gi|81819302|sp|Q5HK03.1|GYRB_STAEQ RecName: Full=DNA gyrase subunit B
gi|27314464|gb|AAO03601.1|AE016744_4 DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228]
gi|57636585|gb|AAW53373.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A]
gi|251805117|gb|EES57774.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060]
gi|281296441|gb|EFA88956.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135]
gi|291318289|gb|EFE58682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329724157|gb|EGG60675.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144]
gi|329735731|gb|EGG72012.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028]
gi|329736056|gb|EGG72329.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045]
gi|341651705|gb|EGS75502.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU105]
gi|341653799|gb|EGS77565.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU037]
gi|341657190|gb|EGS80883.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU109]
gi|365228525|gb|EHM69706.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU071]
gi|374404742|gb|EHQ75710.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU041]
gi|374409769|gb|EHQ80544.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU081]
gi|374409806|gb|EHQ80580.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU065]
gi|374818652|gb|EHR82802.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU120]
gi|374819688|gb|EHR83808.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU117]
gi|374828008|gb|EHR91858.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU125]
gi|374828054|gb|EHR91901.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU123]
gi|374831612|gb|EHR95349.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU126]
gi|383357678|gb|EID35145.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-250]
gi|394241161|gb|EJD86579.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM067]
gi|394250949|gb|EJD96080.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM049]
gi|394252623|gb|EJD97652.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM040]
gi|394253830|gb|EJD98820.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM039]
gi|394264909|gb|EJE09577.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM021]
gi|394265695|gb|EJE10346.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM020]
gi|394275018|gb|EJE19410.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM008]
gi|394282349|gb|EJE26550.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05005]
gi|394288730|gb|EJE32634.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH08001]
gi|394291788|gb|EJE35574.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05001]
gi|394294485|gb|EJE38164.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH06004]
gi|394296118|gb|EJE39748.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH04003]
gi|394296584|gb|EJE40209.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH05003]
gi|394300592|gb|EJE44086.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051668]
gi|406655792|gb|EKC82215.1| DNA gyrase subunit B [Staphylococcus epidermidis AU12-03]
Length = 643
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|292669300|ref|ZP_06602726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
gi|292649141|gb|EFF67113.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Selenomonas noxia
ATCC 43541]
Length = 685
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/553 (50%), Positives = 374/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG Y ++RG
Sbjct: 144 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEISFTRG-- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 200 VTVNKLHEIGI--SETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV 256
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 257 --DERGEEERRETFHFEGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 313
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC
Sbjct: 314 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKDKDGNLSGEDVREGLTC 373
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P + +L K L A +A
Sbjct: 374 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEKGLMASRA 433
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 434 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 493
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 494 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADV 552
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 553 DGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAKKLDEIGR 612
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++
Sbjct: 613 DGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQ 671
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 672 FIEENARLVRNLD 684
>gi|224541292|ref|ZP_03681831.1| hypothetical protein CATMIT_00452 [Catenibacterium mitsuokai DSM
15897]
gi|224525796|gb|EEF94901.1| DNA gyrase, B subunit [Catenibacterium mitsuokai DSM 15897]
Length = 641
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 372/553 (67%), Gaps = 11/553 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+G Y+Q++ G P
Sbjct: 96 IFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVYVHREGHIYYQRFENGGTP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +L V+ ++ GT + F D ++FT +D+ ++ R+RELAFLN L + L
Sbjct: 154 VGSLK--VVGDCEQEETGTTVVFKADPEIFTETTVYDYGVLSQRLRELAFLNKGLKLVLE 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E DP K +EY + GGL EYV +LN +K PLHD ++ ++ I++++A+Q+ +D
Sbjct: 212 DERLDPAK--VDEYHYEGGLREYVAFLNKNKTPLHDHIIDCEDTMNDISVEIAMQY-NDG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T +GGTH EG + +LTR +N+ K +KDKD SLSG+ REGLT
Sbjct: 269 YQPNIYSFCNNINTHEGGTHEEGFRLALTRVINNYAKSHNFLKDKDESLSGDDCREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+ P+P++EGQTKT+LGN EVRK+V + L ++L +PD I+ K A KA
Sbjct: 329 IVSVKHPDPQYEGQTKTKLGNAEVRKIVSTILANALDKFLLENPDTAKIIMDKVTLASKA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAKRAR++ R+K+ L S+LPGKLADCSS P E EIFIVEGDSAGGSAK GRDR+ Q
Sbjct: 389 RMAAKRAREMTRRKTALDVSNLPGKLADCSSKDPSECEIFIVEGDSAGGSAKSGRDRKIQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ G++F LRYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLERILGNAEIRSMITAFGTGI-GDEFDINKLRYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIR L+LTF YRY K L + G +Y PPLY + GK Y Y D EL K+K
Sbjct: 508 DGGHIRILMLTFLYRYLKPLIENGYVYAAQPPLYLLRHGKDDHYLYSDYELDKLKEELGP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
NA Y+IQR+KGLGEM P QLWETT+NPE R+L ++ ++DA +A+ +F LMG RV+ R++
Sbjct: 568 NAKYTIQRYKGLGEMNPEQLWETTMNPENRVLNRIQLDDAMQADQLFDMLMGERVEPRRD 627
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 628 FIRENAKYVENLD 640
>gi|326202777|ref|ZP_08192644.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
gi|325986854|gb|EGD47683.1| DNA gyrase, B subunit [Clostridium papyrosolvens DSM 2782]
Length = 642
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/561 (49%), Positives = 387/561 (68%), Gaps = 21/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG S YSVSGGLHGVG SVVNALSES+EV V R+G Y QKYSRGKP
Sbjct: 97 VVHTILHAGGKFG--SGAYSVSGGLHGVGASVVNALSESMEVEVKREGHIYRQKYSRGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+T++ + + GT F PD +F I FD + + R RE+AFLN + I L
Sbjct: 155 ITSVEI----IGETEDSGTITTFKPDPDIFED-IVFDFDVMITRYREMAFLNRGIKIQLI 209
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++ D EKN + + GG+ +V++LN K+PLHD V+ F D +++A+Q+ +
Sbjct: 210 DQRPDEIIEKNLH----YEGGIISFVEYLNKTKEPLHDKVIYFEGIRDANIVEVAMQY-N 264
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D Y++T+ YAN+I T +GGTH+ G ++++T+ LN +K +++ D +LSGE VREGL
Sbjct: 265 DNYNETVFSYANNIATTEGGTHLTGFRSAITKVLNDYARKFNIIRENDKNLSGEDVREGL 324
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV++P P+FEGQTKT+LGN E+R +V+ V + L +LE +P + IL KSL+A
Sbjct: 325 TAVISVKLPEPQFEGQTKTKLGNSEIRTLVENVVSDKLNIFLEENPAIAKIILDKSLTAA 384
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+L R+KS + SS+LPGKLADCS P ++EIFIVEGDSAGGSAKQGRDR+
Sbjct: 385 RARDAARKARELTRRKSAMDSSTLPGKLADCSEKDPTKTEIFIVEGDSAGGSAKQGRDRK 444
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL GK+LNVE+ ++ NE++ +I ALG G+ G++F LRY KIII+ DA
Sbjct: 445 IQAILPLWGKMLNVEKSRLDKVFDNEKLAPVIIALGAGI-GDEFDTSKLRYDKIIIMADA 503
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV---K 474
DVDG+HIR LLLTFF+RY + L ++G +Y+ +PPL+KV +GK Y YDD ++ K+ +
Sbjct: 504 DVDGSHIRMLLLTFFFRYMRPLVEQGHVYIAMPPLFKVYKGKDEYYAYDDRQVSKIFEDR 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ +IQRFKGLGEM P QLWETT+NPE R + ++ ++DA A+ VFS MG +V
Sbjct: 564 GWRKDDPNVNIQRFKGLGEMNPDQLWETTMNPETRTIMKVDVQDAITADEVFSMFMGEKV 623
Query: 535 DTRKELIQNAANLVNLDHLDI 555
+ RKE I A ++ +LDI
Sbjct: 624 EPRKEYIHLHAK--DVTYLDI 642
>gi|319893736|ref|YP_004150611.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|386318035|ref|YP_006014198.1| DNA gyrase subunit B [Staphylococcus pseudintermedius ED99]
gi|317163432|gb|ADV06975.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03]
gi|323463206|gb|ADX75359.1| DNA gyrase, B subunit [Staphylococcus pseudintermedius ED99]
Length = 640
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 367/552 (66%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE+LEV V RDG +HQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSETLEVYVHRDGRIHHQAYHKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT IRF D +F +++ T+ RIRELAFLN + I L
Sbjct: 155 AFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNKGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ +N +K+PLHD V + D I +++ALQ+ S
Sbjct: 211 DE-RDEENVREDSYHYEGGIKSYVELINENKEPLHDEPVYVHQTRDDIEVEIALQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE REGLT
Sbjct: 269 FATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGEDTREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K + A +A
Sbjct: 329 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEKGIMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKSGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKEKLNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG V+ R++
Sbjct: 568 TPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|418412794|ref|ZP_12986045.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
gi|410883855|gb|EKS31687.1| DNA gyrase subunit B [Staphylococcus epidermidis BVS058A4]
Length = 643
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ Y+ LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYIDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|160914817|ref|ZP_02077031.1| hypothetical protein EUBDOL_00824 [Eubacterium dolichum DSM 3991]
gi|158433357|gb|EDP11646.1| DNA gyrase, B subunit [Eubacterium dolichum DSM 3991]
Length = 648
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/552 (48%), Positives = 378/552 (68%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEVTV ++G ++ ++ G KP
Sbjct: 109 IFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVTVHQNGKKHFLRFENGGKP 166
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ G+ +RF D +FT + +T+ RIR+LAFLN + + +
Sbjct: 167 SGALKV----IGDTDKHGSVVRFKADASIFTETQVYSFDTLNTRIRQLAFLNKGIRLVII 222
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D E+ + EY + GG+ +YV++LN +K LH DV+ +GI ++ALQ+ +D
Sbjct: 223 --DEREEEAKRIEYKYDGGIRQYVEYLNKNKNVLHEDVIYVEGLEEGILAEVALQY-NDG 279
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T++GGTH +G + +LTR +N+ +++ +K KD +L+G+ VREGLT
Sbjct: 280 YMPNIYSFCNNINTMEGGTHEDGFRLALTRVINAYARENNLIK-KDETLAGDDVREGLTA 338
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+V + + L +L +P I+ K + A KA
Sbjct: 339 IISVKHPDPQYEGQTKTKLGNSEVRKIVSGILGDQLERFLIENPTTAKIIVEKGVLASKA 398
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L +SLPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQ
Sbjct: 399 RMAAKKARELTRRKSALEITSLPGKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQ 458
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +++N EI++++ A G G+ G++ LRYHKI+I+TDADV
Sbjct: 459 AILPLRGKILNVEKARLHRIFENNEIRSMVTAFGCGI-GDEIDISKLRYHKIVIMTDADV 517
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LTFFYR+ + + + G +Y+ +PPL+KV +G +V+Y Y + E+++V++
Sbjct: 518 DGAHICTLMLTFFYRFLRPVIEGGYVYIAMPPLFKVAKGNRVEYVYKEEEMERVRAEMGE 577
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N ++QR+KGLGEM P QLWETT++P R LKQ+ IEDA EA+ +F LMG V+ R+E
Sbjct: 578 NV--NVQRYKGLGEMNPEQLWETTMDPAFRTLKQVNIEDAVEADAIFEMLMGEEVEPRRE 635
Query: 540 LIQNAANLVNLD 551
IQ A LD
Sbjct: 636 FIQENAKYATLD 647
>gi|419770807|ref|ZP_14296873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
gi|383362634|gb|EID39981.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-K]
Length = 643
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|345862366|ref|ZP_08814591.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
gi|344324551|gb|EGW36104.1| DNA gyrase, B subunit [Desulfosporosinus sp. OT]
Length = 659
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/551 (48%), Positives = 384/551 (69%), Gaps = 14/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKFGGS S Y VSGGLHGVGLSVVNALS+ L V V + G YHQ+Y+ GKP
Sbjct: 120 LTVLHAGGKFGGSESAYKVSGGLHGVGLSVVNALSKWLVVEVSKGGHVYHQEYAIGKP-- 177
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
T +++ + + GT+I F PD +F + +D + +A R+REL+FLN +TI L
Sbjct: 178 --TSNLVNIGITESSGTKISFIPDPDIFEDTV-YDFDILAHRLRELSFLNKSVTINL--- 231
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYS 181
+D N + GG++++V++LN +K LH F + + D + +++++Q+ +D Y+
Sbjct: 232 -TDERTNVKETFLHTGGIQDFVRYLNKNKDCLHPQPIFIETIKDHVQVEVSMQY-NDGYA 289
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G K++LTR +N +K+ +K D +L+G+ +REGLT +I
Sbjct: 290 ENLFSYANNINTQEGGTHEAGFKSALTRVVNDYARKNNIIKAADSNLTGDDIREGLTAVI 349
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP+P+FEGQTKT+LGN E+R +VD + E L+ +LE +P + + KS+ A +A
Sbjct: 350 SVKVPDPQFEGQTKTKLGNSEIRGIVDSATGEGLSTFLEENPAIARKFIDKSVQAARARD 409
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L +SLPGKLADCS P+ E+++VEGDSAGGSAKQGRDRRFQAI
Sbjct: 410 AARKARELTRRKSALEGTSLPGKLADCSWKEPDLCEMYLVEGDSAGGSAKQGRDRRFQAI 469
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKI+NVE+ + +N EI+ +I A+G G+ E F E RY+K+II+TDADVDG
Sbjct: 470 LPLRGKIINVEKARLDKILENAEIRAMITAMGTGISDE-FDIEKARYNKLIIMTDADVDG 528
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFFYRY + L + +Y+ PPL+KV++G+ +QY Y D EL K+ +
Sbjct: 529 AHIRTLLLTFFYRYMRPLIENHYVYIAQPPLFKVKKGRDIQYAYSDFELGKILEKIGKDK 588
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ IQR+KGLGEM P QLWETT++P +R + Q+ +EDA + +F+ LMG +V+ R++ I
Sbjct: 589 V-EIQRYKGLGEMNPEQLWETTMDPAKRTILQVTMEDAIRSEEMFTVLMGDKVEPRRDFI 647
Query: 542 Q-NAANLVNLD 551
+A ++ N+D
Sbjct: 648 NLHAKDVRNID 658
>gi|257127028|ref|YP_003165142.1| DNA gyrase subunit beta [Leptotrichia buccalis C-1013-b]
gi|257050967|gb|ACV40151.1| DNA gyrase, B subunit [Leptotrichia buccalis C-1013-b]
Length = 660
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/577 (46%), Positives = 380/577 (65%), Gaps = 34/577 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LE TV RDG + Q Y RG P
Sbjct: 91 VVLTVLHAGGKF--DNDNYKVSGGLHGVGVSVVNALSEWLEATVTRDGKIFRQTYERGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + V GT +RF D ++F T + +D++ + R++ELA+LN L I L
Sbjct: 149 --TSPVEEIGVADDSAHGTVVRFKADDEIFETTV-YDYSVLESRLKELAYLNKGLKIELA 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR--------KDVDG------ 166
E + E + E+ F GG+++++ + ++K + DV+ K+V+
Sbjct: 206 DE-RNAENVKAEEFLFEGGIKDFLNEIIDEEKIIDDVIYMADTMQIEEAKEVEAEDENGN 264
Query: 167 ----------ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGK 216
+ +++A+ + + + +T+ + N+I T +GGTH+ G + +LTRT+N + K
Sbjct: 265 IVIKQRSAKFVEVEIAMNYTT-SQRETVYSFVNNINTHEGGTHVSGFRTALTRTINDIAK 323
Query: 217 KSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLT 276
+ +KDK+ + G VREGL C+ISV++P P+FEGQTKT+LGN EV +V V L
Sbjct: 324 QMNLIKDKNGTFQGTDVREGLVCVISVKIPEPQFEGQTKTKLGNSEVTGIVSNIVGSNLK 383
Query: 277 EYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEES 336
YLE HP + ++ K + + +A AAK+AR+LV +K+ L SLPGKLADCSS P ES
Sbjct: 384 FYLEDHPKAAEKVIEKMVMSKRAREAAKKARELVLRKNTLEVGSLPGKLADCSSKDPAES 443
Query: 337 EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV 396
EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILNVE+ +N EI+ +I A G G
Sbjct: 444 EIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEKSGIHKALENAEIRAMITAFGAGF 503
Query: 397 KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE 456
GE+ + LRYHKI+I+TDADVDGAHIRTL+LTFFYR+ + L +EG IY+ PPLYK++
Sbjct: 504 -GEEIDLKKLRYHKIVIMTDADVDGAHIRTLMLTFFYRHLRELINEGYIYIAQPPLYKIQ 562
Query: 457 RGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLV 515
GK ++Y Y D ++K+V + Y+IQR+KGLGEM P QLWETTL+PE R L ++
Sbjct: 563 AGKAIRYAYSDDQMKQVTRVLENEGRKYTIQRYKGLGEMNPEQLWETTLDPEVRTLLKVS 622
Query: 516 IEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+EDA+ A+ +F+ LMG +V+ R++ I++ AN V NLD
Sbjct: 623 MEDASYADKMFNILMGDKVEPRRKFIEDNANYVRNLD 659
>gi|355572977|ref|ZP_09043945.1| DNA gyrase, B subunit [Methanolinea tarda NOBI-1]
gi|354823989|gb|EHF08248.1| DNA gyrase, B subunit [Methanolinea tarda NOBI-1]
Length = 665
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/584 (47%), Positives = 391/584 (66%), Gaps = 44/584 (7%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S+ Y VSGGLHGVG+SVVNALS L V+RDG Y ++ RG+
Sbjct: 92 VVLTVLHAGGKFDKST--YQVSGGLHGVGVSVVNALSRWLHARVYRDGNIYEMRFERGRV 149
Query: 61 VTTLTCHVLPVD-----------------SKDR-----------QGTRIRFWPDKQVFTT 92
+ L ++ DR GT I F PD+ +F T
Sbjct: 150 TSPLASREESIEELIARYQEWYGSRPAFRGSDRAEFLQKFGNHLSGTLITFAPDETIFET 209
Query: 93 AIQFDHNTIAGRIRELAFLNPKLTIALRKEDS-DPEKNQYNEYFFAGGLEEYVQWLNTDK 151
++FD++ +A R+RELAFLN ++I+L E + D EK Y GG+ EYV++LN
Sbjct: 210 -VRFDYDILAHRLRELAFLNAGISISLLDERTGDSEKFHYE-----GGIAEYVRFLNAGA 263
Query: 152 KPLH-DVVGFRK-DVDGIT-IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLT 208
+PLH DV+ +K D + +T I++ALQ+ + YS+ + Y NS+ T +GGTH+EG ++++T
Sbjct: 264 EPLHPDVISLKKNDPESMTEIEVALQYTT-GYSEQIFSYVNSVNTREGGTHLEGFRSAIT 322
Query: 209 RTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVD 268
+ +N+ +K+ +++ +S+ GE VREGLT IISV++ NP+FEGQTK RLGN V+ +VD
Sbjct: 323 KAVNNSARKNNLIRETGLSIRGEDVREGLTAIISVKIANPQFEGQTKMRLGNSNVKGIVD 382
Query: 269 QSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADC 328
V + L++Y E +P VL +I+ K L+A +A AA+ AR+L R+KS L ++ LPGKLADC
Sbjct: 383 SLVYQSLSDYFEENPRVLSAIVEKVLTAARAREAARNARELARRKSTLETTGLPGKLADC 442
Query: 329 SSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNL 388
S P SEI+IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + + KN EIQ L
Sbjct: 443 SERDPARSEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKATQHRILKNAEIQAL 502
Query: 389 IRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVG 448
I A+G GV GE F E RYH++I++TDADVDGAHIRTLLLTFF+RY K L +EG +Y+
Sbjct: 503 ISAIGTGV-GEQFDPEKARYHRVILMTDADVDGAHIRTLLLTFFFRYMKRLIEEGFVYIA 561
Query: 449 VPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQ 508
PPL++V +GK +Y + + E+K++ + ++QR+KGLGEM QLW TT++P
Sbjct: 562 QPPLFRVAKGKVEKYAFREEEMKEIVKELGEKGV-TVQRYKGLGEMNAGQLWSTTMDPAS 620
Query: 509 RMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
R+LK++ IEDA+ AN +F LMG V R++ I+ +A + NLD
Sbjct: 621 RVLKRVTIEDASFANEIFEKLMGEDVAARRDFIKRHAREVTNLD 664
>gi|224477952|ref|YP_002635558.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222422559|emb|CAL29373.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 640
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 369/552 (66%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+ Y+Q Y RG P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVHRNNKIYNQAYKRGIP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT IRF D ++FT + + + RIRELAFLN + I+LR
Sbjct: 155 QYDLKV----IGETEHNGTEIRFKADPEIFTETTTYQYEVLQKRIRELAFLNKGIQISLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-VDGITIDLALQWCSDA 179
E D + + + Y + GG++ YV+ LN +K+PL D + D D + +++A+Q+ S
Sbjct: 211 DE-RDEDNIREDSYHYEGGIKSYVELLNENKEPLFDEPVYVHDRKDDVEVEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH +G K +LTR LNS G KS +K+ LSGE REG+T
Sbjct: 269 FTTNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTKSGLIKEDKERLSGEDTREGMTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ +P+FEGQTKT+LGN EVR++VD+ E + +L HP V I+ K L A +A
Sbjct: 329 IVSIKHEDPQFEGQTKTKLGNSEVRQIVDRLSAEDMERFLYEHPQVARIIIEKGLMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RIAAKKAREVTRRKSALEVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKLGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKSRLDRILNNNEIRSMITAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K+KS
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNERELEKLKSELKP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWSISRYKGLGEMDADQLWETTMNPEHRSMLQVTLEDAIEADTTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|347751700|ref|YP_004859265.1| DNA gyrase subunit B [Bacillus coagulans 36D1]
gi|347584218|gb|AEP00485.1| DNA gyrase, B subunit [Bacillus coagulans 36D1]
Length = 641
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/554 (50%), Positives = 378/554 (68%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALS L+V V RDG Y+QKY RGKP
Sbjct: 98 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELDVYVHRDGHIYYQKYRRGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + DR GT F PD ++FT +FD + + R+RELAFLN + I +
Sbjct: 156 AFDLKI----IGETDRTGTTTHFKPDPEIFTETTEFDFDILTTRLRELAFLNKGIKITIE 211
Query: 121 -KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
K + +P K EY + GG++ YV+ LN K+ LH + + + DGIT++++LQ+ +D
Sbjct: 212 DKREKNPRKQ---EYHYEGGIKSYVEHLNRSKEVLHKEPIYVEGEKDGITVEVSLQY-ND 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
++ + +AN+I T +GGTH G K +LTR +N +K+ +K+ + +L+GE VREGLT
Sbjct: 268 GFASNIYSFANNIHTYEGGTHESGFKTALTRVINDYARKNNLIKENEANLTGEDVREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+S++ P+P+FEGQTKT+LGN E R + D E +++ +P V I+ K L A +
Sbjct: 328 AIVSIKHPDPQFEGQTKTKLGNTEARTITDAVFSETFEKFMMENPQVARKIVEKGLMAAR 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A +AAK+AR+L R+KS L S+SLPGKLADC+S P ESE++IVEGDSAGGSAKQGRDR F
Sbjct: 388 ARMAAKKARELTRRKSALESTSLPGKLADCTSRDPAESELYIVEGDSAGGSAKQGRDRMF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+ +I ALG GV GEDF RYHK++I+TDAD
Sbjct: 448 QAILPLRGKILNVEKARLDKILSNAEIRTIITALGTGV-GEDFDISKARYHKVVIMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L D G IY+ PPLYKV++GK+V+Y Y D L+++ ++ P
Sbjct: 507 VDGAHIRTLLLTFFYRYMRPLIDAGYIYIAQPPLYKVQQGKRVEYVYSDRGLEELLNTLP 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT+ P R + Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 567 AQPKPAIQRYKGLGEMNPEQLWETTMEPANRTMLQVSLDDAIEADGTFEMLMGDKVEPRR 626
Query: 539 ELI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 NFIEENAIYVKNLD 640
>gi|433461798|ref|ZP_20419400.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
gi|432189693|gb|ELK46776.1| DNA gyrase subunit B [Halobacillus sp. BAB-2008]
Length = 640
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 367/553 (66%), Gaps = 16/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG Y+Q Y RG P
Sbjct: 100 ILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLEVFVHRDGNIYYQAYHRGVPA 157
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL-- 119
L + D GTRI F PD+++F+ ++ +A R+RELAFLN LTI +
Sbjct: 158 DDLKV----IGETDITGTRITFKPDEEIFSETQEYKFEILANRLRELAFLNKGLTITIDD 213
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
++ D DP +Y F GG+ YV+ +N ++ LHD + D I+I++A+Q+ +D
Sbjct: 214 KRTDEDPV-----QYHFEGGILSYVEHMNRTREVLHDAFFIEGEQDEISIEIAMQY-NDG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + YAN+I T +GGTH G K LTR +N +K+ K+ D +L+G+ VREGLT
Sbjct: 268 FASNIYSYANNIHTYEGGTHESGFKTGLTRVINDYARKNNMFKETDPNLTGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R V D E + +L +P + +I+ K L A +A
Sbjct: 328 IISLKHPDPQFEGQTKTKLGNSEARTVTDALFSENFSRFLFENPQMAKTIVEKGLMASRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L S+LPGKLADCSS + SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RMAAKKARELTRRKSALEVSNLPGKLADCSSKDAKISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ GEDF E RYHKI+I+TDADV
Sbjct: 448 AILPLRGKIINVEKARLDKILSNNEIRTIITALGTGI-GEDFDIEKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L ++G IY+ PPLYK+++GK Y Y D L + + +
Sbjct: 507 DGAHIRTLLLTFFYRYMRPLIEKGYIYIAQPPLYKIQQGKATYYTYSDKGLDSMLAQLSA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE R + Q+ +EDA A+ F LMG +V+ R+
Sbjct: 567 SPKPGIQRYKGLGEMNPEQLWETTMDPETRSMLQVNLEDAMGADETFDILMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 627 FIQENAQYVQNLD 639
>gi|393809331|gb|AFN25839.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/552 (50%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRVLTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKVELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|332980610|ref|YP_004462051.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
gi|332698288|gb|AEE95229.1| DNA gyrase subunit B [Mahella australiensis 50-1 BON]
Length = 633
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/554 (50%), Positives = 385/554 (69%), Gaps = 22/554 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAG KFGG S LHGVG+SVVNALSE L VTV ++G Y Q+Y RGKPVT
Sbjct: 96 LTMLHAGSKFGGGGYKVSGG--LHGVGVSVVNALSEWLIVTVKQNGHIYRQRYERGKPVT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + D GT I F PD QVF ++++++T+ R RELAFLN ++TI L E
Sbjct: 154 DLEV----IGDTDETGTTISFKPDYQVFE-ELEYNYDTLRNRFRELAFLNKEVTITLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSD 178
D ++ E+ + GG+ +V++LN +K PLH + G R DV +++A+Q+ +D
Sbjct: 209 RDDKKE----EFHYEGGIVSFVEYLNKNKSPLHKEAIYISGMRDDVQ---VEVAIQY-ND 260
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y +++ +AN+I T +GGTH+ G ++++T+ +N +K +K + SLSG+ VREGLT
Sbjct: 261 SYVESVYAFANNIETPEGGTHLSGFRSAMTKVINDYARKLNMLKPNEPSLSGDDVREGLT 320
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV++ +P+FEGQTK +LGN EVR +VD V + L+ Y E HP V I+ K++SA +
Sbjct: 321 AIISVKLSDPQFEGQTKEKLGNSEVRGIVDSIVSDGLSTYFEEHPSVTKIIIEKAISAFR 380
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR+L R+KS L S S+PGKLADCS P+ EIF+VEGDSAGGSAKQGRDRRF
Sbjct: 381 AREAARKARELTRRKSALESVSMPGKLADCSERDPKLCEIFLVEGDSAGGSAKQGRDRRF 440
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + NEEI+ +I A G G+ GEDF LRY +II +TDAD
Sbjct: 441 QAILPLRGKILNVEKTRLDRILSNEEIKAMITAFGAGI-GEDFDISKLRYERIICMTDAD 499
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDG+HIRTLLLTFFYRY + L + G +Y+ PPLYKVE+GK+ Y Y D EL+++ +
Sbjct: 500 VDGSHIRTLLLTFFYRYMRPLLENGNVYIAQPPLYKVEKGKKEYYIYSDRELEQLLTRIG 559
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + ++QR+KGLGEM PVQLW+TT++P +R + ++ IEDA A+ +F+ LMG V+ R+
Sbjct: 560 RDGI-TVQRYKGLGEMDPVQLWDTTMDPAKRTMLKVSIEDAIAADEIFTILMGDNVEPRR 618
Query: 539 ELIQNAANLV-NLD 551
E I + A+LV NLD
Sbjct: 619 EFIASNAHLVKNLD 632
>gi|418615337|ref|ZP_13178282.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|418634910|ref|ZP_13197301.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|420166072|ref|ZP_14672760.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|420190648|ref|ZP_14696589.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|420205714|ref|ZP_14711237.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|420209623|ref|ZP_14715059.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|420211483|ref|ZP_14716842.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|420235726|ref|ZP_14740262.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
gi|374817511|gb|EHR81691.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU118]
gi|374836452|gb|EHS00040.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU129]
gi|394234127|gb|EJD79712.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM088]
gi|394258581|gb|EJE03461.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM037]
gi|394269399|gb|EJE13933.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM015]
gi|394278520|gb|EJE22835.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM003]
gi|394280818|gb|EJE25089.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM001]
gi|394302395|gb|EJE45840.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIH051475]
Length = 643
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTVIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|164510802|emb|CAK18883.1| topoisomerase II subunit B [Staphylococcus pseudintermedius]
Length = 611
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 367/552 (66%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE+LEV V RDG +HQ Y +G P
Sbjct: 68 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSETLEVYVHRDGRIHHQAYHKGVP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT IRF D +F +++ T+ RIRELAFLN + I L
Sbjct: 126 AFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNKGIRITLT 181
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ +N +K+PLHD + + D I +++ALQ+ S
Sbjct: 182 DE-RDEENVREDSYHYEGGIKSYVELINENKEPLHDEPIYVHQTRDDIEVEIALQYNS-G 239
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE REGLT
Sbjct: 240 FATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGEDTREGLTA 299
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K + A +A
Sbjct: 300 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEKGIMASRA 359
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K GRD R Q
Sbjct: 360 RIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKSGRDSRTQ 419
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+I+TDADV
Sbjct: 420 AILPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGE-FDISKARYHKIVIMTDADV 478
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 479 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKEKLNP 538
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG V+ R++
Sbjct: 539 TPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGDVVENRRQ 598
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 599 FIEDNAVYANLD 610
>gi|448385291|ref|ZP_21563797.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
gi|445656786|gb|ELZ09618.1| DNA gyrase subunit B [Haloterrigena thermotolerans DSM 11522]
Length = 643
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/548 (47%), Positives = 374/548 (68%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRHAFEGGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT+I+FWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEETGTQIQFWPDTGIFETG-EMSFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
+E++D Y + GG+ E+V++LN + +H DV+ F + I I++A+Q +
Sbjct: 210 DEREETDDGDVVTETYEYDGGIREFVEYLNETRSAMHEDVIYFEDEEQSIQIEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L+GE +REGL
Sbjct: 269 EELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDNNLTGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +SI++K++ A
Sbjct: 329 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAESIVNKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNPD 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 449 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE ++ +
Sbjct: 508 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDEIVAEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I+ A
Sbjct: 628 KQFIKENA 635
>gi|257062759|ref|YP_003142431.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
gi|256790412|gb|ACV21082.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476]
Length = 648
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/562 (48%), Positives = 375/562 (66%), Gaps = 16/562 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFGG GY VSGGLHGVG+S VNALS LEV V RDG +Y +SRGK
Sbjct: 96 VVLTILHAGGKFGGE--GYKVSGGLHGVGVSCVNALSTRLEVEVCRDGKKYGIAFSRGKT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + + GT + FWPD ++FT + +D+ T+ R RE+AFLN L I L
Sbjct: 154 VEKLH----QIGTSKTTGTTVTFWPDPEIFTDTLVYDYETLQERFREMAFLNKGLRIELT 209
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
E D E N +E F + GG+ ++V++LN K+ L+ + F + T+++ +QW +
Sbjct: 210 DERQQDEEGNFKHETFKYDGGIVDFVKYLNQGKETLNKPIYFEAENADGTVEVVMQWSTS 269
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
++ ++ +AN+I T +GGTH++G K +LTRT+N + +K+KD +L+G+ REGL
Sbjct: 270 YGTNGIMAFANNINTHEGGTHLDGFKNALTRTINDYARSKGLLKEKDKNLTGDDAREGLA 329
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV++ +P+FEGQTKT+LGN E+R +V +V + L+EYLE +P I+ K+ ALK
Sbjct: 330 AIISVKLHDPQFEGQTKTKLGNVEIRGLVQGAVTKGLSEYLEENPTPAKRIVGKASQALK 389
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+K VL S S+PGKLADCSS P SE+FIVEGDSAGGSAKQ RDR++
Sbjct: 390 AREAARKAREMTRRKGVLDSFSMPGKLADCSSREPALSEMFIVEGDSAGGSAKQARDRKY 449
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVER ++ I +LI A+G + G+D+ + RYH+III+TDAD
Sbjct: 450 QAILPLRGKILNVERAGLHRALSSDTISSLITAIGTNI-GDDYNGDNARYHRIIIMTDAD 508
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER-----GKQVQYCYDDAELKKV 473
VDGAHIR LLLTFFYRY L + G IY+ PPLY +++ GK ++Y Y+D ++
Sbjct: 509 VDGAHIRCLLLTFFYRYMPDLINRGYIYIAQPPLYGLKKKNSASGKILKYIYNDEAKDQI 568
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ Y IQR+KGLGEM P QLWETT+ PE R L Q+ IEDAA A S LMG
Sbjct: 569 MAQLEDPDKYDIQRYKGLGEMDPEQLWETTMEPETRTLIQVSIEDAAAAERAVSDLMGDD 628
Query: 534 VDTRKELIQNAANLVNLDHLDI 555
V+ RKE IQ N +++ LDI
Sbjct: 629 VEPRKEFIQK--NALDVRFLDI 648
>gi|189462935|ref|ZP_03011720.1| hypothetical protein BACCOP_03637 [Bacteroides coprocola DSM 17136]
gi|189430362|gb|EDU99346.1| DNA gyrase, B subunit [Bacteroides coprocola DSM 17136]
Length = 654
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/562 (48%), Positives = 370/562 (65%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G + Q+Y+ GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTNVFRNGKIHQQEYACGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V + D GTR FWPD +FTT ++ +N + R+RELA+LN +TI L
Sbjct: 158 LYA----VKEVGTTDITGTRQTFWPDGSIFTTT-EYKYNILQARMRELAYLNKGITITLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + + F G++E+V++LN+ PL DV+ + GI I+ A+ + +
Sbjct: 213 DKREKEEDGSFKQEIFHSEEGVKEFVRFLNSTNTPLIDDVIYLNTEKQGIPIECAIMY-N 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ + + Y N+I TI+GGTH G + +LTR L ++SK ++ + +SGE REGL
Sbjct: 272 TGFRENLHSYVNNINTIEGGTHEAGFRTALTRVLKKYAEESKALEKAKVEISGEDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
+ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP +I+ K + A
Sbjct: 332 IAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKTIVDKVVLAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A +AA++AR+ V++KS + LPGKLADCSS T EE E+F+VEGDSAGGSAKQGR R+
Sbjct: 392 TARIAARKARESVQRKSPMGGGGLPGKLADCSSRTAEECELFLVEGDSAGGSAKQGRSRQ 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKG-EDFKK---EALRYHKI 411
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV G ED KK + LRYHK+
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGVDGTEDSKKANIDKLRYHKV 511
Query: 412 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 471
II+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YCY D E +
Sbjct: 512 IIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIANPPLYKCSKGKISEYCYTDEERQ 571
Query: 472 KVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+ I QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA+ +FS L
Sbjct: 572 AFMQKYGDGTETGIHTQRYKGLGEMNPEQLWETTMNPETRILKQVSIENAAEADYIFSML 631
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A N+D
Sbjct: 632 MGDDVAPRREFIEKHATYANID 653
>gi|314934956|ref|ZP_07842315.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
gi|313652886|gb|EFS16649.1| DNA gyrase, B subunit [Staphylococcus caprae C87]
Length = 644
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 370/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V+R+ YHQ Y +G P
Sbjct: 102 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVYRNDTIYHQAYKKGVP 159
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 160 QFDLK----EIGETDQTGTAIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + + Y + GG++ YV+ LN +K+PLH+ + + D I +++ALQ+ S
Sbjct: 216 DEREEEGRED--SYHYEGGIKSYVELLNENKEPLHEEPIYIHQTKDDIEVEIALQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRILNSYGIQSKIIKEDKDKLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ EY +L HP V I+ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFAEYFERFLFEHPAVGRIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 572 TPKWSISRYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|393809325|gb|AFN25836.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 374/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V + YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQELEVYVHLNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|393809335|gb|AFN25841.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 374/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V + YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHLNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DEREDEEQREDT-YHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|422344230|ref|ZP_16425156.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
gi|355377549|gb|EHG24766.1| DNA gyrase, B subunit [Selenomonas noxia F0398]
Length = 684
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 372/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG Y ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMEVEVRRDGKIYEISFTRGVT 200
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 201 VNKLH----EIGTSETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 --DERGEEERRETFHFEGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N + +KDKD +LSGE VREGLTC
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARCLSVLKDKDGNLSGEDVREGLTC 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P + +L K L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAITKKVLEKGLMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|294495525|ref|YP_003542018.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
gi|292666524|gb|ADE36373.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219]
Length = 634
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/553 (48%), Positives = 378/553 (68%), Gaps = 15/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF SS Y VSGGLHGVG+SVVNALSE +V V R+G ++Q+Y RGKP
Sbjct: 94 VVMTILHAGGKFDKSS--YKVSGGLHGVGVSVVNALSEWNDVEVHRNGKIFYQRYVRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V+ + GT + F PD +F T + F+ T+ R+RELAFLN + I +
Sbjct: 152 LD----DVIEKGDTESTGTSMTFKPDTDIFET-VDFNFETLVTRLRELAFLNRGIKIVIT 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ SD + EY GG+ +V++LN + LH+ + F ++ + +++A+Q+ +D+
Sbjct: 207 DKRSDEPLQEVFEY--DGGIVSFVEYLNKSRNVLHEQPIYFEREKEDTRVEIAMQY-TDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN+I T +GGTH+ G K++LTR N K + K DI LSG+ +REGL
Sbjct: 264 YGEYVYSFANNINTHEGGTHLAGFKSALTRVANDYAKSNNLAK-GDIKLSGDDIREGLAG 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ +P+FEGQTKT+LGN E++ +VD V E L+E++E +P + +IL K++ A +A
Sbjct: 323 IISVKLMDPQFEGQTKTKLGNSELKGIVDSMVSEGLSEFMEENPKIASAILQKAMDARRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L S+LPGKLADCS P SEI++VEGDSAGGSAK GRDRRFQ
Sbjct: 383 REAAKKARELTRRKSALEVSTLPGKLADCSEKDPSVSEIYLVEGDSAGGSAKMGRDRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP RGKILNVE+ A + KN EI +LI A+G G+ G+++ RYHK++I+TDADV
Sbjct: 443 AILPFRGKILNVEKSRLARILKNNEILSLITAMGTGI-GDEYDLTKARYHKVVIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFF+RY L D G +Y+ PPLY +++GK ++ Y + E ++
Sbjct: 502 DGAHIRTLMLTFFFRYMTPLIDAGYVYIAQPPLYSIKKGKNQRFAYTEREKDRIIEEIGE 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ SIQR+KGLGEM P QLWETT+NP+ R + Q+ +EDA A+ +FS LMG V R++
Sbjct: 562 KGV-SIQRYKGLGEMNPDQLWETTMNPQTRTILQVTMEDAVAADEMFSVLMGDEVAPRRK 620
Query: 540 LIQ-NAANLVNLD 551
IQ +A +++NLD
Sbjct: 621 FIQEHAKDVINLD 633
>gi|346226422|ref|ZP_08847564.1| DNA gyrase subunit B [Anaerophaga thermohalophila DSM 12881]
Length = 656
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/560 (48%), Positives = 379/560 (67%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS +L+ V RDG Y Q+Y +GKP
Sbjct: 104 VVMTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSSNLKAEVHRDGKIYRQEYQKGKP 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + D+ GT I F PD +F I+F ++ +A R+RELAFLN L I L
Sbjct: 162 LAPIE----EVGTTDKTGTWITFMPDSSIFNN-IEFKYSILASRMRELAFLNSGLEIILT 216
Query: 121 -KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
K + D E N +E F++ GL E+V +++ +++ L D + + + I +D+A+ + +
Sbjct: 217 DKREKDEEGNFKSERFYSENGLIEFVNFIDGNREKLIDEPIHISTEKNDIPVDIAIVYNT 276
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++++ + Y N+I TI+GGTH+ G + LTRTL + +KS + ++G+ REGL
Sbjct: 277 -SFNENVYSYVNNINTIEGGTHLTGFRRGLTRTLKNWAEKSGMLSKLKFDINGDDFREGL 335
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VDQ+V L+ YLE +P +I +K + A
Sbjct: 336 TAVISVKVAEPQFEGQTKTKLGNSEVSLAVDQAVSTMLSNYLEENPKEAKAIANKVILAA 395
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR+LV++KSVL LPGKLADCS PE++EIF+VEGDSAGG+AKQGRDRR
Sbjct: 396 TARHAARKARELVQRKSVLSGGGLPGKLADCSERDPEQAEIFLVEGDSAGGTAKQGRDRR 455
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++N+EI+N+ ALG+ + E+ K E LRYHKI+I
Sbjct: 456 FQAILPLRGKILNVEKALQHKVFENDEIKNIFTALGVNIGTEEDSKALNIEKLRYHKIVI 515
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL++TFF+RY K L +G +Y+ PPLY +++GK +YC+ DA+ ++
Sbjct: 516 MTDADVDGSHIATLIMTFFFRYMKELIKKGYLYIATPPLYFLKKGKFEEYCWTDAQRREF 575
Query: 474 KSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ S IQR+KGLGEM QLW TT+NPE RML+Q+ E+AAEA+ +FS LMG
Sbjct: 576 VEKYADGKEDSVHIQRYKGLGEMNSEQLWHTTMNPENRMLRQVTYENAAEADRIFSMLMG 635
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 636 DDVPPRREFIEKNATYANID 655
>gi|393408286|emb|CCI10030.1| topoisomerase II subunit B [Staphylococcus hominis]
gi|393809319|gb|AFN25833.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809321|gb|AFN25834.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809329|gb|AFN25838.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 374/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+ +HD + + D I +++A+Q+ S
Sbjct: 215 DEREDEEQREDT-YHYEGGIKSYVELLNENKESIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|89101114|ref|ZP_01173950.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
gi|89084169|gb|EAR63334.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911]
Length = 640
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 283/553 (51%), Positives = 380/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QK+ RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVRRDGKLHYQKFERGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT I F PD ++FT +++++ +A RIRELAFLN L I +
Sbjct: 156 AADLKV----IGEAEETGTTIHFKPDGEIFTETLEYEYEILANRIRELAFLNRGLKITI- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED E N+ +EYF+ GG++ YV+ LN K+ LH+ + + +GIT+++A+Q+ +D
Sbjct: 211 -EDKRAE-NKKSEYFYEGGIKSYVEHLNRTKEVLHEEPIYIEGEKEGITVEVAIQY-NDG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + YAN+I T +GGTH G K +LTR +N +K+ KD D +LSGE VREGLT
Sbjct: 268 FTGNIYSYANNIHTYEGGTHESGFKTALTRVINDYARKNGIFKDSDANLSGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ P+P+FEGQTKT+LGN EVR V D ++ ++L +P V ++ K L A +A
Sbjct: 328 IVSIKHPDPQFEGQTKTKLGNSEVRTVTDTFFSDHFEKFLMENPQVARKVVEKGLMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RLAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N E++ +I A G G+ G+DF+ RYHKI+I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDKILSNNEVRAIITAAGTGI-GDDFEISKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPLYKV++GK+V+Y Y+D +L ++ P
Sbjct: 507 DGAHIRTLLLTFFYRYMRQIIEAGYIYIAQPPLYKVQQGKRVEYAYNDKQLDQIFEELPK 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+IQR+KGLGEM P QLWETT++P R L Q+ +EDA EA+ F LMG +V+ R++
Sbjct: 567 APKPNIQRYKGLGEMNPEQLWETTMDPGTRTLLQVSLEDAIEADETFEILMGDKVEPRRQ 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 FIEDNAVYVKNLD 639
>gi|423310102|ref|ZP_17288086.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
gi|392682742|gb|EIY76084.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T12C37]
Length = 653
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/562 (46%), Positives = 386/562 (68%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+YS G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYSCGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN + I+L
Sbjct: 158 LYS----VKEVGTTDITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNAGIKISLT 212
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKP-LHDVVGFRKDVDGITIDLALQWCS 177
D E N E F++ GL+E+V+++++ ++ ++DV+ + G +++A+ + +
Sbjct: 213 DLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSSREHFMNDVIYINTEKQGTPVEVAIMY-N 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G+ REGL
Sbjct: 272 TSYNENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E LT YLE HP I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALTYYLEEHPKEAKLIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R
Sbjct: 392 QARIAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRA 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY KII
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKII 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + +GC+Y+ PPLY +GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIQQGCLYIATPPLYLCTKGKAKEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ +FS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEADYIFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|418629092|ref|ZP_13191607.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
gi|374834825|gb|EHR98460.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU127]
Length = 643
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLHD + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHDEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKRKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|414160151|ref|ZP_11416422.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878801|gb|EKS26671.1| DNA gyrase subunit B [Staphylococcus simulans ACS-120-V-Sch1]
Length = 639
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 368/552 (66%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE+LEV V R+ Y+Q Y RG P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSETLEVFVHRNNKIYNQAYKRGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + GT IRF D ++FT + + + RIRELAFLN + + LR
Sbjct: 155 QYDLKV----VGETEHTGTEIRFKADPEIFTETTTYQYELLQKRIRELAFLNKGIQLTLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-VDGITIDLALQWCSDA 179
E + K + Y + GG++ YV+ +N +K+PL D + D D + +++ALQ+ S
Sbjct: 211 DERGEEVKE--DSYHYEGGIKSYVELINENKEPLFDEPVYLHDRKDDVEVEIALQYNS-G 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S +L YAN+I T +GGTH +G K +LTR LNS G + +KD LSGE REGLT
Sbjct: 268 FSTNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGIQQGIMKDDKERLSGEDTREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E + +L HP V I+ K + A +A
Sbjct: 328 VVSIKHSNPQFEGQTKTKLGNSEVRQIVDRLFTEDMERFLLEHPQVARIIVEKGMMASRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIFIVEGDSAGGS K GRD R Q
Sbjct: 388 RIAAKKAREVTRRKSALEVSSLPGKLADCSSKNPEESEIFIVEGDSAGGSTKLGRDSRTQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE+F RYHKI+I+TDADV
Sbjct: 448 AILPLRGKILNVEKSRLDRILNNNEIRSMITAFGTGI-GEEFDISKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K+KS
Sbjct: 507 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNERELEKLKSELKP 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA EA++ F LMG V+ R++
Sbjct: 567 TPKWSIARYKGLGEMDADQLWETTMNPEHRSMLQVTLEDAIEADLTFEMLMGDVVENRRQ 626
Query: 540 LIQNAANLVNLD 551
I+ A NLD
Sbjct: 627 FIEENAVYANLD 638
>gi|160891431|ref|ZP_02072434.1| hypothetical protein BACUNI_03882 [Bacteroides uniformis ATCC 8492]
gi|270295441|ref|ZP_06201642.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|423304784|ref|ZP_17282783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
gi|156858838|gb|EDO52269.1| DNA gyrase, B subunit [Bacteroides uniformis ATCC 8492]
gi|270274688|gb|EFA20549.1| DNA gyrase, B subunit [Bacteroides sp. D20]
gi|392683448|gb|EIY76783.1| DNA gyrase, B subunit [Bacteroides uniformis CL03T00C23]
Length = 653
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/562 (46%), Positives = 386/562 (68%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+YS G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYSCGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN + I+L
Sbjct: 158 LYS----VKEVGTTDITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNAGIKISLT 212
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKP-LHDVVGFRKDVDGITIDLALQWCS 177
D E N E F++ GL+E+V+++++ ++ ++DV+ + G +++A+ + +
Sbjct: 213 DLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSSREHFMNDVIYINTEKQGTPVEVAIMY-N 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G+ REGL
Sbjct: 272 TSYNENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E LT YLE HP I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALTYYLEEHPKEAKLIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R
Sbjct: 392 QARIAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRA 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY KII
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKII 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + +GC+Y+ PPLY +GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIQQGCLYIATPPLYLCTKGKAKEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ +FS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEADYIFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|440782434|ref|ZP_20960451.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
gi|440219958|gb|ELP59167.1| DNA gyrase subunit B [Clostridium pasteurianum DSM 525]
Length = 636
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/557 (49%), Positives = 387/557 (69%), Gaps = 22/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGK GY VSGGLHGVG SVVNALSE+ EV V R+G + Q Y RG
Sbjct: 95 VIMTVLHAGGK--FGGGGYKVSGGLHGVGASVVNALSETCEVIVKREGHIWRQMYHRGNV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + GT+I F PD ++F I+F+++T+A R+RELAFLN + I
Sbjct: 153 ASPFE----KIGDTEEHGTKINFKPDPEIFDE-IEFNYDTLAQRLRELAFLNKGIKINFV 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
E D ++ + + GG++ +V +LN +K+P+ + G++ + +++ALQ+
Sbjct: 208 DERQDKKE----VFHYEGGIKSFVSYLNRNKEPIFPEPIYIEGYKNEY---MVEIALQY- 259
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y++ + +AN+I T++GGTH+ G K +LTR LN +K +K+ D + SGE +REG
Sbjct: 260 NDGYAENLFSFANNIDTVEGGTHLSGFKTALTRVLNDYARKFNFIKENDKNFSGEDIREG 319
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV++P+P+FEGQTKT+LGN EVR +VD + E ++ +LE +P + I+ K++ A
Sbjct: 320 LTAVVSVKLPDPQFEGQTKTKLGNSEVRGIVDSILGENVSAFLEENPQIAKIIIDKAMLA 379
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR+L R+KSVL +++LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDR
Sbjct: 380 SRARDAAKKARELTRRKSVLETTALPGKLADCSSKDPAECEIYIVEGDSAGGSAKQGRDR 439
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKI+NVE++ + +E I+ +I A G G+ +DF E +RYH+III+TD
Sbjct: 440 RFQAILPLRGKIMNVEKQRIDKILNSEMIRAMITAFGAGI-SKDFNIEKIRYHRIIIMTD 498
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L ++G +Y+ PPLYKV +GK+ YCY + EL K
Sbjct: 499 ADVDGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLYKVSKGKKEIYCYLEEELDKALEE 558
Query: 477 FPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ SIQR+KGLGEM QLWETT++PE+R+L + +EDA A+ +F+ LMG +V+
Sbjct: 559 LGGKDNNTSIQRYKGLGEMNAEQLWETTMDPERRILLKATVEDAMAADEIFTILMGDKVE 618
Query: 536 TRKELI-QNAANLVNLD 551
R+E I QNA N+VNLD
Sbjct: 619 PRREFIQQNAKNVVNLD 635
>gi|317478438|ref|ZP_07937599.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
gi|316905397|gb|EFV27190.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36]
Length = 653
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/562 (46%), Positives = 386/562 (68%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+YS G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYSCGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN + I+L
Sbjct: 158 LYS----VKEVGTTDITGTRQQFWPDGTIFTETV-YNYDILATRMRELAYLNAGIKISLT 212
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKP-LHDVVGFRKDVDGITIDLALQWCS 177
D E N E F++ GL+E+V+++++ ++ ++DV+ + G +++A+ + +
Sbjct: 213 DLRVKDEEGNAKKEIFYSEEGLKEFVRYVDSSREHFMNDVIYINTEKQGTPVEVAIMY-N 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G+ REGL
Sbjct: 272 TSYNENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E LT YLE HP I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALTYYLEEHPKEAKLIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R
Sbjct: 392 QARIAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRA 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY KII
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKII 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + +GC+Y+ PPLY +GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIQQGCLYIATPPLYLCTKGKAKEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ +FS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEADYIFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|223043343|ref|ZP_03613389.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|417906712|ref|ZP_12550492.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
gi|222443132|gb|EEE49231.1| DNA gyrase, B subunit [Staphylococcus capitis SK14]
gi|341597523|gb|EGS40077.1| DNA gyrase, B subunit [Staphylococcus capitis VCU116]
Length = 639
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 284/552 (51%), Positives = 372/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V+R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVYRNDTIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 155 QFDLK----EIGETDQTGTAIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV+ LN +K+PLH+ + + D I +++ALQ+ S
Sbjct: 211 DERE--EEGREDSYHYEGGIKSYVELLNENKEPLHEEPIYIHQTKDDIEVEIALQYNS-G 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 268 YATNLLTYANNIHTYEGGTHEDGFKRALTRILNSYGIQSKIIKEDKDKLSGEDTREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ EY +L HP V I+ K + A +A
Sbjct: 328 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFAEYFERFLFEHPAVGRIIVEKGVMASRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 388 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 507 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 567 TPKWSISRYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 626
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 627 FIEDNAVYANLD 638
>gi|238926604|ref|ZP_04658364.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
gi|238885550|gb|EEQ49188.1| DNA gyrase subunit B [Selenomonas flueggei ATCC 43531]
Length = 685
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 283/554 (51%), Positives = 376/554 (67%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG + +SRG
Sbjct: 144 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTEMDVEVRRDGKIFAISFSRG-- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLNPKLTIAL 119
VTT H + + D GTR+ F PD ++FT T FD T+ R+RELAFLN +TI L
Sbjct: 200 VTTTKLH--EIGTSDTTGTRVHFVPDPEIFTVTTYSFD--TLKHRLRELAFLNHGITITL 255
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
E +++ + F GG+ +V LN K+ +++ + F D +++A+Q+ +D
Sbjct: 256 TDERGAEVRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-ND 312
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE VREGLT
Sbjct: 313 SYQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKEKDGNLSGEDVREGLT 372
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P V +L K+L A +
Sbjct: 373 AVISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPAVTKKVLDKALMASR 432
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRF
Sbjct: 433 AREAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRF 492
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDAD
Sbjct: 493 QAILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKIIIMTDAD 551
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 VDGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDDEQAKKLDELG 611
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R+
Sbjct: 612 RDGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRR 670
Query: 539 ELIQNAANLV-NLD 551
+ I+ A LV NLD
Sbjct: 671 QFIEENAKLVRNLD 684
>gi|403385778|ref|ZP_10927835.1| DNA gyrase subunit B [Kurthia sp. JC30]
Length = 639
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 371/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS V V RDG + K+ RGK
Sbjct: 97 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTETIVQVHRDGHIHEIKFERGKT 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT RF D ++F ++ + +A R+RELA+LN + I++
Sbjct: 155 VQPLKV----IGDTDHNGTTTRFKADPEIFKETTVYEFDILAHRVRELAYLNRGIRISII 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E E+ N+Y + GG++ YV+ +N K+P+H+ + + + DGI+I++A+Q+ + +
Sbjct: 211 DEREGQERR--NDYHYEGGIKSYVEHMNEKKEPIHEAIDLKGEKDGISIEIAMQYNA-GF 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GGTH G K +LTR +N +KS +K D +LSGE VREGL I
Sbjct: 268 ASNIFSFANNINTYEGGTHESGFKTALTRVINDYARKSNLLKAADANLSGEDVREGLIAI 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN EV + + E+ +L +P V +I+ K L A +A
Sbjct: 328 VSIKHPDPQFEGQTKTKLGNSEVSAITNSLFSEHFERFLLENPSVARTIVDKGLIASRAR 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR++ R+KS L SSLPGKLADCSS PEE E++IVEGDSAGGSAK GRDR FQA
Sbjct: 388 VAAKKAREMTRRKSALEVSSLPGKLADCSSRHPEECEMYIVEGDSAGGSAKSGRDRHFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+ +I A+G G+ GEDF E RYHK++I+TDADVD
Sbjct: 448 ILPLRGKILNVEKARLDRILSNAEIRAMITAIGTGI-GEDFNLEKARYHKVVIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+R+ + L + G IYV PPLY+V++GK V+YCY DAEL+++ P
Sbjct: 507 GAHIRTLLLTFFFRFMRPLIEAGYIYVAQPPLYQVKQGKHVEYCYSDAELQEIVGRLPQQ 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM QLW+TT++PE R+L Q+ ++DA EA+ F LMG V+ R++
Sbjct: 567 PKPMVQRYKGLGEMNADQLWDTTMDPEHRVLLQVELDDALEADRAFEDLMGDDVEPRRQF 626
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 IHENAVYVENLD 638
>gi|257875897|ref|ZP_05655550.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
gi|257810063|gb|EEV38883.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20]
Length = 649
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/533 (49%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV
Sbjct: 180 PDPEIFTETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNASKTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTALTRVINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGF-GADFDVAKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + +LK S P+ S+QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPSVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|20806552|ref|NP_621723.1| DNA gyrase subunit B [Thermoanaerobacter tengcongensis MB4]
gi|20514990|gb|AAM23327.1| DNA gyrase (topoisomerase II) B subunit [Thermoanaerobacter
tengcongensis MB4]
Length = 654
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 385/552 (69%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q Y RG P T
Sbjct: 117 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSERLEVIVKQRGKVFRQVYERGVPKT 174
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + + GT I F PDK++F I FD++ +A R+RELAFLN + I L E
Sbjct: 175 PLEV----IGETEETGTIITFKPDKEIFE-EIVFDYDILAQRLRELAFLNKGINIKLIDE 229
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
D ++ +N + GGL +V++LN +K+ LH+ + K+ D +++ +Q+ +D+Y
Sbjct: 230 -RDGKEEVFN---YEGGLIAFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEVCMQY-NDSY 283
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G K++LT+ +N KK +KD + +L GE VREGLT I
Sbjct: 284 NENIYSFANNIDTKEGGTHLIGFKSALTKVINDYAKKYGMIKDGEKNLQGEDVREGLTAI 343
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKTRLGNPE+R +V+ V E L+ YLE +P V I+ K+L A +A
Sbjct: 344 VSVKLKNPQFEGQTKTRLGNPEMRSIVEGVVTEKLSAYLEENPSVARIIVEKALQAARAR 403
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+FIVEGDSAGGSAK GR+ RFQA
Sbjct: 404 EAARKARELTRRKSALENTALPGKLADCSEKDPSKCELFIVEGDSAGGSAKAGRNSRFQA 463
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ ++ NEEI+++I ALG G+ GEDF LRYHK+II+TDADVD
Sbjct: 464 ILPLRGKILNVEKARLDKIFSNEEIRSIITALGTGI-GEDFDISKLRYHKVIIMTDADVD 522
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+R+ K L + G IY+ PPLYK+ +GK+V Y Y D EL K+ S
Sbjct: 523 GSHIRTLLLTFFFRFMKPLIENGHIYIAQPPLYKITKGKKVYYAYSDRELDKILSEIGRE 582
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ +QR+KGLGEM QLWETT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 583 NIV-VQRYKGLGEMNADQLWETTMDPEKRTMLKVTLEDAIAADEIFTILMGDKVEPRREF 641
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 642 IEKYAKTVRNLD 653
>gi|423613637|ref|ZP_17589497.1| DNA gyrase subunit B [Bacillus cereus VD107]
gi|401241702|gb|EJR48089.1| DNA gyrase subunit B [Bacillus cereus VD107]
Length = 642
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 381/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + DR GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGETDRTGTITRFKPDPEIFQETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIEYGYIYIAQPPLFKVQQGKKIQYAYNDRELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P++ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAHPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|404418103|ref|ZP_10999881.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
gi|403489506|gb|EJY95073.1| DNA gyrase subunit B [Staphylococcus arlettae CVD059]
Length = 645
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/554 (50%), Positives = 368/554 (66%), Gaps = 9/554 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V+ D +HQ Y RG P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYLDNKIHHQAYKRGIP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ D GT IRF D +FT +++ T+ RIRELAFLN ++I LR
Sbjct: 155 --QFDLKVIGETDGDTTGTAIRFKADPTIFTETTAYNYETLEQRIRELAFLNKGISITLR 212
Query: 121 KEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
E E Y E YF+ GG++ YV+ LN +K+PLH+ + + D I +++ALQ+ S
Sbjct: 213 DERETLEDGSYREDSYFYEGGIKSYVEMLNENKEPLHEEPIYVHESKDEIEVEIALQYNS 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++ +L YAN+I T +GGTH +G K +L+R LNS G KSK +K+ LSGE REGL
Sbjct: 273 -GFATNLLTYANNIHTYEGGTHEDGFKRALSRVLNSYGIKSKIIKEDKDRLSGEDTREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++S++ +P+FEGQTKT+LGN EVR+VVD+ E +L +P+V I+ K + A
Sbjct: 332 TAVVSIKHGDPQFEGQTKTKLGNSEVRQVVDKLFAELFERFLYENPNVARVIVEKGIMAS 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR++ R+KS L SSLPGKLADCSS PE+SEIFIVEGDSAGGS K GRD
Sbjct: 392 RARIAAKKAREVTRRKSALEVSSLPGKLADCSSKDPEKSEIFIVEGDSAGGSTKSGRDSE 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILNVE+ + N EI++++ A G G+ GE F RYHKII++TDA
Sbjct: 452 TQAILPLRGKILNVEKARLDRILNNNEIRSMVTAFGTGIGGE-FDLSKARYHKIIVMTDA 510
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL K+K+
Sbjct: 511 DVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLFKLTQGKQKYYVFNERELDKLKAEL 570
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA A+ F LMG V+ R
Sbjct: 571 EPTPKWSIARYKGLGEMNADQLWETTMNPENRSMLQVTLEDAISADQTFEMLMGDVVENR 630
Query: 538 KELIQNAANLVNLD 551
++ I++ A LD
Sbjct: 631 RQFIEDNAVYATLD 644
>gi|371777742|ref|ZP_09484064.1| DNA gyrase subunit B [Anaerophaga sp. HS1]
Length = 656
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/560 (47%), Positives = 381/560 (68%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS SL+ V RDG + Q+Y RGKP
Sbjct: 104 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSSLKAEVRRDGKIFRQEYERGKP 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + D+ GT I F PD +F ++ ++ +AGR+RELAFLN L I L
Sbjct: 162 L----APIREVGTTDQTGTAITFMPDSTIFNNT-EYKYSVLAGRMRELAFLNAGLEIILT 216
Query: 121 -KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCS 177
K + D E N +E F++ GL E+V +++ +++PL + F V + I +D+A+ + +
Sbjct: 217 DKREKDEEGNFKSERFYSKDGLIEFVNFIDDNREPLIEKPIFISTVKNDIPVDIAILYNT 276
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++++ + Y N+I TI+GGTH+ G + LTRTL + +KS +SG+ REGL
Sbjct: 277 -SFNENVYSYVNNINTIEGGTHLTGFRRGLTRTLKNWAEKSGMFSKLKFDISGDDFREGL 335
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN +V VDQ+V L+ YLE +P +I++K + A
Sbjct: 336 TAVISVKVAEPQFEGQTKTKLGNSDVSLAVDQAVSTMLSNYLEENPKDAKAIVNKVILAA 395
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR+LV++KSVL LPGKLADCS PE++EIF+VEGDSAGG+AKQGRDRR
Sbjct: 396 TARHAARKARELVQRKSVLSGGGLPGKLADCSVRDPEKAEIFLVEGDSAGGTAKQGRDRR 455
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K + LRYHKI+I
Sbjct: 456 FQAILPLRGKILNVEKALQHKVFENEEIKNIFTALGVTIGTEEDSKALNLDKLRYHKIVI 515
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL++TFF+RY K L +G +Y+ PPLY +++GK +YC+ DA+ ++
Sbjct: 516 MTDADVDGSHIATLIMTFFFRYMKDLIKKGYLYIATPPLYFLKKGKIEEYCWTDAQRREF 575
Query: 474 KSSFPSNA--LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ + +QR+KGLGEM QLW TT+NPE+R+L+Q+ E+AAEA+ +FS LMG
Sbjct: 576 IEKYANGKEDTVHVQRYKGLGEMNAEQLWMTTMNPEKRLLRQVTYENAAEADRIFSMLMG 635
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 636 DDVPPRREFIEKNATYANID 655
>gi|302390804|ref|YP_003826624.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302202881|gb|ADL11559.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 639
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/549 (49%), Positives = 383/549 (69%), Gaps = 13/549 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + GY VSGGLHGVG+SVVNALSE LEV V RD YHQ+Y G P
Sbjct: 98 IVMTVLHAGGKF--DNEGYKVSGGLHGVGVSVVNALSEWLEVEVMRDNKIYHQRYEEGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V LT + GT I+F PD ++F + I F++ + R++ELA+LN + I ++
Sbjct: 156 VKDLTV----IGESQASGTMIKFKPDLEIFES-IDFEYKKLIKRLKELAYLNKGIKIEIK 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ D K +Y GG+ +VQ LN +K P+H+ + F + + I++A+Q+ ++
Sbjct: 211 DKRRDEIKTDIFQY--DGGIVSFVQELNENKDPIHEEPIYFETEEEDNHIEVAIQY-NET 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y D + +AN+I T +GG H+ G K++LTRT+N ++ +K+ D +LSG+ +REG+
Sbjct: 268 YVDNIFTFANNINTHEGGNHLSGFKSALTRTINDYARRHDYLKEDDSNLSGDDIREGIVA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I++V++P+P+FEGQTKT+L N EVR +VD V E L +LE P++ I+ K++ A +A
Sbjct: 328 IVNVKLPDPQFEGQTKTKLANSEVRGIVDSVVSENLDRFLEEDPEIGSIIVQKAIKAAEA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L S++LPGKLADCSS PEESE++IVEGDSAGGSAKQGRDR+FQ
Sbjct: 388 RKAAKKARELTRRKSALTSTALPGKLADCSSRDPEESELYIVEGDSAGGSAKQGRDRKFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + N EI++LI ALG G+ G++F E RY KIII+TDADV
Sbjct: 448 AILPLKGKILNVEKARLNKILNNNEIRSLITALGTGI-GKEFDMEQARYKKIIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G IY+ PPLYKV +G++ Y Y+D +L+++ +
Sbjct: 507 DGAHIRTLLLTFFYRYMRPLLEAGNIYIAQPPLYKVNKGRKEYYVYNDRKLEELLNEIGR 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + SIQR+KGLGEM P QLWETT++PE R Q+ IEDA A+ +F++LMG +V R++
Sbjct: 567 SGI-SIQRYKGLGEMNPKQLWETTMDPENRTTLQVQIEDAVMADDIFTTLMGDKVAPRRK 625
Query: 540 LIQNAANLV 548
IQ A V
Sbjct: 626 FIQKHAKEV 634
>gi|229083320|ref|ZP_04215682.1| DNA gyrase subunit B [Bacillus cereus Rock3-44]
gi|228699995|gb|EEL52618.1| DNA gyrase subunit B [Bacillus cereus Rock3-44]
Length = 640
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D GT RF PD ++F ++D +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E+ Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRENK-----QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ S
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEYGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILSEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|229014660|ref|ZP_04171774.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048]
gi|229170197|ref|ZP_04297883.1| DNA gyrase subunit B [Bacillus cereus AH621]
gi|423490641|ref|ZP_17467323.1| DNA gyrase subunit B [Bacillus cereus BtB2-4]
gi|423496365|ref|ZP_17473009.1| DNA gyrase subunit B [Bacillus cereus CER057]
gi|423496841|ref|ZP_17473458.1| DNA gyrase subunit B [Bacillus cereus CER074]
gi|423513056|ref|ZP_17489586.1| DNA gyrase subunit B [Bacillus cereus HuA2-1]
gi|423520150|ref|ZP_17496631.1| DNA gyrase subunit B [Bacillus cereus HuA2-4]
gi|423595333|ref|ZP_17571363.1| DNA gyrase subunit B [Bacillus cereus VD048]
gi|423597250|ref|ZP_17573250.1| DNA gyrase subunit B [Bacillus cereus VD078]
gi|423659655|ref|ZP_17634824.1| DNA gyrase subunit B [Bacillus cereus VDM022]
gi|423671041|ref|ZP_17646070.1| DNA gyrase subunit B [Bacillus cereus VDM034]
gi|423672736|ref|ZP_17647675.1| DNA gyrase subunit B [Bacillus cereus VDM062]
gi|228613298|gb|EEK70437.1| DNA gyrase subunit B [Bacillus cereus AH621]
gi|228746671|gb|EEL96560.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048]
gi|401149547|gb|EJQ57018.1| DNA gyrase subunit B [Bacillus cereus CER057]
gi|401156743|gb|EJQ64146.1| DNA gyrase subunit B [Bacillus cereus HuA2-4]
gi|401163261|gb|EJQ70608.1| DNA gyrase subunit B [Bacillus cereus CER074]
gi|401222009|gb|EJR28611.1| DNA gyrase subunit B [Bacillus cereus VD048]
gi|401238782|gb|EJR45214.1| DNA gyrase subunit B [Bacillus cereus VD078]
gi|401294535|gb|EJS00163.1| DNA gyrase subunit B [Bacillus cereus VDM034]
gi|401304283|gb|EJS09840.1| DNA gyrase subunit B [Bacillus cereus VDM022]
gi|401311250|gb|EJS16557.1| DNA gyrase subunit B [Bacillus cereus VDM062]
gi|402428986|gb|EJV61077.1| DNA gyrase subunit B [Bacillus cereus BtB2-4]
gi|402446099|gb|EJV77962.1| DNA gyrase subunit B [Bacillus cereus HuA2-1]
Length = 642
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 158 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|260890953|ref|ZP_05902216.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
gi|260859506|gb|EEX74006.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254]
Length = 660
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/577 (47%), Positives = 378/577 (65%), Gaps = 34/577 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LE TV RDG + Q Y RG P
Sbjct: 91 VVLTVLHAGGKF--DNDNYKVSGGLHGVGVSVVNALSEWLEATVTRDGKIFRQTYERGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + V GT +RF D ++F T + +D++ + R++ELA+LN L I L
Sbjct: 149 --TSPVEEIGVADDGTHGTVVRFKADDEIFETTV-YDYSVLESRLKELAYLNKGLKIELA 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFR--------KDVDG------ 166
E + E + E+ F GG+++++ + ++K + DV+ K+V+
Sbjct: 206 DE-RNAENVKAEEFLFEGGIKDFLNEIIDEEKIIDDVIYMADTMQIEEAKEVEAEDENGN 264
Query: 167 ----------ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGK 216
+ +++A+ + + + +T+ + N+I T +GGTH+ G + +LTRT+N + K
Sbjct: 265 TVIKQRGAKFVEVEIAMNYTT-SQRETVYSFVNNINTHEGGTHVSGFRTALTRTINDIAK 323
Query: 217 KSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLT 276
+ +KDK+ + G VREGL C+ISV++P P+FEGQTKT+LGN EV +V V L
Sbjct: 324 QMNLIKDKNGTFQGTDVREGLVCVISVKIPEPQFEGQTKTKLGNSEVTGIVSNIVGSNLK 383
Query: 277 EYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEES 336
YLE HP + I+ K + +A AAK+AR+LV +K+ L SLPGKLADCSS P ES
Sbjct: 384 FYLEDHPKAAEKIIEKMAMSKRAREAAKKARELVLRKNTLEVGSLPGKLADCSSKDPAES 443
Query: 337 EIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV 396
EIFIVEG+SAGGSAKQGRDRRFQAILPLRGKILNVE+ +N EI+ +I A G G
Sbjct: 444 EIFIVEGNSAGGSAKQGRDRRFQAILPLRGKILNVEKSGVHKALENAEIRAMITAFGAGF 503
Query: 397 KGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE 456
GE+ + LRYHKI+I+TDADVDGAHIRTL+LTFFYR+ + L +EG IY+ PPLYK++
Sbjct: 504 -GEEMDLKKLRYHKIVIMTDADVDGAHIRTLMLTFFYRHLRELINEGYIYIAQPPLYKIQ 562
Query: 457 RGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLV 515
GK ++Y Y D ++K+V Y+IQR+KGLGEM P QLWETTL+PE R L ++
Sbjct: 563 AGKAIRYAYSDDQMKQVTRVLEGEGRKYTIQRYKGLGEMNPEQLWETTLDPEVRTLLKVS 622
Query: 516 IEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+EDA+ A+ +F+ LMG +V+ R++ I++ AN V NLD
Sbjct: 623 MEDASYADKMFNILMGDKVEPRRKFIEDNANYVRNLD 659
>gi|194332868|ref|YP_002014728.1| DNA gyrase subunit B [Prosthecochloris aestuarii DSM 271]
gi|194310686|gb|ACF45081.1| DNA gyrase, B subunit [Prosthecochloris aestuarii DSM 271]
Length = 644
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/553 (48%), Positives = 372/553 (67%), Gaps = 18/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V RDG ++Q+Y RG P
Sbjct: 100 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVSRDGKVWYQRYHRGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
C V + D+ GT+ F PD +F T +F + I R+RELAFLN L I ++
Sbjct: 158 ----QCEVKIIGETDKTGTKTTFMPDASIFKTT-EFRKDVIIDRMRELAFLNSVLKIVVK 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D E + + GG++E+V + + ++ L + V + D +++ALQ+ +D+
Sbjct: 213 DTDDSEET-----FHYEGGIKEFVTYTDHNRIALVKEPVYLYGERDTTVVEIALQY-NDS 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL+G+ +EGLT
Sbjct: 267 YQENVFSYVNNINTHEGGTHMTGFRKALTRTLNAYAQKNDLLKNLKLSLTGDDFKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+V P+FEGQTKT+LGN E + +V+ V E L E+LE +P+VL +I+ K SA +
Sbjct: 327 IISVKVAEPQFEGQTKTKLGNSETQSIVESIVNEQLAEFLESNPNVLKTIIEKVKSAALS 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+KSVL S+ LPGKLADCS PE E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 387 RDAARKAKELTRRKSVLESTGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ +I ALG ++F + LRY KIII+TDADV
Sbjct: 447 AILPLKGKILNVEKARLHKMLENEEIKTIILALGTNFGEDEFMADKLRYGKIIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKS 475
DGAHIRTLLLTFF+R+ + L + G +++ PPLY ++ GK+ +Y +D+ E ++ +K
Sbjct: 507 DGAHIRTLLLTFFFRHMRPLIEAGKVFIAQPPLYLIKAGKEQKYAWDEDERTTIMEMMKK 566
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
S +IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+LMG +VD
Sbjct: 567 SQKGKTNINIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVTVENAMEADQVFSTLMGDKVD 626
Query: 536 TRKELIQNAANLV 548
R+E I+ A V
Sbjct: 627 PRREFIEKNARYV 639
>gi|423369455|ref|ZP_17346886.1| DNA gyrase subunit B [Bacillus cereus VD142]
gi|401077892|gb|EJP86219.1| DNA gyrase subunit B [Bacillus cereus VD142]
Length = 642
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 158 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|420202666|ref|ZP_14708256.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
gi|394269207|gb|EJE13745.1| DNA gyrase, B subunit [Staphylococcus epidermidis NIHLM018]
Length = 643
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/552 (50%), Positives = 371/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+G YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNGTIYHQAYKQGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF DK++FT +++ T+ RIRELAFLN + I L+
Sbjct: 159 QFDLK----EIGDTDKTGTAIRFKADKEIFTETTVYNYETLQKRIRELAFLNKGIQITLK 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV LN +K+PLH+ + + D I +++ALQ+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVDLLNENKEPLHEEPIYIHQSKDDIEVEIALQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YGTNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 VVSIKHGDPQFEGQTKTKLGNSEVRQVVDRLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS PEESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPEESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKQELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 SPKWSIARYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|163938018|ref|YP_001642902.1| DNA gyrase subunit B [Bacillus weihenstephanensis KBAB4]
gi|229136319|ref|ZP_04265066.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196]
gi|163860215|gb|ABY41274.1| DNA gyrase, B subunit [Bacillus weihenstephanensis KBAB4]
gi|228647191|gb|EEL03279.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196]
Length = 640
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 156 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|339501434|ref|YP_004699469.1| DNA gyrase subunit B [Spirochaeta caldaria DSM 7334]
gi|338835783|gb|AEJ20961.1| DNA gyrase, B subunit [Spirochaeta caldaria DSM 7334]
Length = 635
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/561 (48%), Positives = 385/561 (68%), Gaps = 23/561 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF +S Y VSGGLHGVG+SVVNALS EV V RDG ++QKY G P
Sbjct: 92 LVMTKLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSTWCEVFVHRDGKIHYQKYHIGVP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
++ + + +++GT +RF D +F TT FD ++ R+RELAFLN + I++
Sbjct: 150 EESVKV----IGTTNKRGTIVRFLADATIFETTTYNFD--VLSNRLRELAFLNKGIRISI 203
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQW 175
R E K+ +E+ F GG+ +V++LN +K LH + G R D++ ++ A+Q+
Sbjct: 204 RDERLTTPKS--HEFIFEGGVVSFVEYLNQNKTVLHKECIYIAGTRDDIE---VECAIQY 258
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D +++ M + N I T +GGTH+ G K++LTRTLN KKSK K + SLSG+ VRE
Sbjct: 259 -NDGFNEIMFSFVNDINTREGGTHLVGFKSALTRTLNEYLKKSKLAKKMEESLSGDDVRE 317
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT ++SV+VPNP+FEGQTK +LGN EV+ +V+ V E L +L+ HPD++++IL KS+
Sbjct: 318 GLTAVLSVKVPNPQFEGQTKGKLGNSEVKGIVESLVNEQLELFLDQHPDIVNAILEKSVL 377
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA +AA++ARD R+K+++ S+ LPGKLADCS P + E+FIVEGDSAGGSAK GR+
Sbjct: 378 AAKARIAARQARDATRRKNLMESAGLPGKLADCSEKDPTKCELFIVEGDSAGGSAKMGRN 437
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R FQAIL L GK+LNVE+ + N+++Q +I ++G G+ G+ F LRYHKIII+
Sbjct: 438 RAFQAILSLWGKMLNVEKTHIEKVITNDKLQPIIASIGAGI-GDSFDISKLRYHKIIIMA 496
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV-K 474
DADVDG+HIRTLLLTFFYRY L + G +Y+ +PPLYK+ K+V Y YDDAE ++
Sbjct: 497 DADVDGSHIRTLLLTFFYRYMTELIERGHVYLAMPPLYKITYEKKVFYAYDDAEKDRILA 556
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
S +IQR+KGLGEM P QLWETT++PE+R + Q+ ++DA EA +FS+LMG +V
Sbjct: 557 ESGKDPEKVAIQRYKGLGEMNPDQLWETTMDPERRNIVQVHMDDAVEAERIFSTLMGEQV 616
Query: 535 DTRKELIQNAANLVNLDHLDI 555
+ R+ I+ N + + +LD+
Sbjct: 617 EPRRIFIEE--NALAVSYLDV 635
>gi|164510805|emb|CAK18885.1| topoisomerase II subunit B [Staphylococcus pseudintermedius]
Length = 611
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 277/552 (50%), Positives = 367/552 (66%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS++LEV V RDG +HQ Y +G P
Sbjct: 68 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSDTLEVYVHRDGRIHHQAYHKGVP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT IRF D +F +++ T+ RIRELAFLN + I L
Sbjct: 126 AFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNKGIRITLT 181
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ +N +K+PLHD + + D I +++ALQ+ S
Sbjct: 182 DE-RDEENVREDSYHYEGGIKSYVELINENKEPLHDEPIYVHQTRDDIEVEIALQYNS-G 239
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE REGLT
Sbjct: 240 FATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGTQSKLIKEDKDRLSGEDTREGLTA 299
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K + A +A
Sbjct: 300 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLYEHPQVARIIVEKGIMASRA 359
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K GRD R Q
Sbjct: 360 RIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKSGRDSRTQ 419
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+I+TDADV
Sbjct: 420 AILPLRGKILNVEKARLDKILNNNEIRQMVTAFGTGIGGE-FDISKARYHKIVIMTDADV 478
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 479 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKEKLNP 538
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG V+ R++
Sbjct: 539 TPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGDVVENRRQ 598
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 599 FIEDNAVYANLD 610
>gi|302391744|ref|YP_003827564.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
gi|302203821|gb|ADL12499.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501]
Length = 637
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/553 (48%), Positives = 381/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF SSGY VSGGLHGVG+SVVNALSE LE+T+WR+G Y Q+Y +G P
Sbjct: 96 LVLTTLHAGGKF--DSSGYKVSGGLHGVGISVVNALSEWLELTIWRNGYTYTQQYEKGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT +S + GT+I F PD+ +F +++ + +A R++E AFLN L I+L
Sbjct: 154 VTEFE----KSNSTTKTGTKIEFKPDEDIFDN-VKYKFDVLANRLQESAFLNKGLKISLV 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D+ P + Y + GGLE ++ +LN D+ LHD +V ++VD +++A Q+ + +
Sbjct: 209 --DTRPGLEKEVTYQYDGGLEAFIDYLNQDRDLLHDDIVYLEEEVDDTYVEVAFQY-NKS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+++ + +AN+I T DGG H+ G K +LTR N+ K + +K D L+G +REGLT
Sbjct: 266 FNERIYSFANNINTHDGGYHLTGFKTALTRAFNNYAKDNNLLKKSDPKLTGRDLREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+++V++ P+FEGQTK +LGN E+R VV+ +V YL +YL H D+ +++K+L A+KA
Sbjct: 326 VVNVKLTEPQFEGQTKAKLGNSEIRSVVEGAVYNYLNQYLPRHHDMAKEVINKALEAVKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A++L ++K VL ++SLPGKL+DCSS EESE+++VEGDSAGGSAKQGR+R FQ
Sbjct: 386 RKAAKKAKELTKRKGVLNNNSLPGKLSDCSSRKSEESELYLVEGDSAGGSAKQGRNRDFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVER + N EI +I ALG G+ GE+F + LRYHKIII+TDADV
Sbjct: 446 AILPLKGKILNVERARLNKIINNNEIAAIITALGTGI-GEEFNIDKLRYHKIIIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LT FYRY L EG +YV PPLYKV +Y Y D +L+K +
Sbjct: 505 DGAHICTLILTLFYRYMPELIREGHVYVAQPPLYKVTYRGDEEYIYTDKQLQKYLADLDR 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + SIQR+KGLGEM P QLWETT+NPE R L+++++++ EA+ +F+ LMG++ R+E
Sbjct: 565 SKV-SIQRYKGLGEMNPSQLWETTMNPENRKLQEIMVDEEREADSIFTRLMGSKAKLRRE 623
Query: 540 LIQNAANLV-NLD 551
I A+L NLD
Sbjct: 624 FIMANADLASNLD 636
>gi|423451258|ref|ZP_17428111.1| DNA gyrase subunit B [Bacillus cereus BAG5X1-1]
gi|423471658|ref|ZP_17448402.1| DNA gyrase subunit B [Bacillus cereus BAG6O-2]
gi|423520670|ref|ZP_17497143.1| DNA gyrase subunit B [Bacillus cereus HuA4-10]
gi|401146266|gb|EJQ53782.1| DNA gyrase subunit B [Bacillus cereus BAG5X1-1]
gi|401179767|gb|EJQ86930.1| DNA gyrase subunit B [Bacillus cereus HuA4-10]
gi|402431469|gb|EJV63537.1| DNA gyrase subunit B [Bacillus cereus BAG6O-2]
Length = 642
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 158 AADLKV----IGETDRTGTITRFKPDAEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|89892751|ref|YP_516238.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219666076|ref|YP_002456511.1| DNA gyrase subunit beta [Desulfitobacterium hafniense DCB-2]
gi|423075892|ref|ZP_17064606.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
gi|89332199|dbj|BAE81794.1| DNA gyrase subunit B [Desulfitobacterium hafniense Y51]
gi|219536336|gb|ACL18075.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DCB-2]
gi|361853120|gb|EHL05306.1| DNA gyrase, B subunit [Desulfitobacterium hafniense DP7]
Length = 644
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/551 (49%), Positives = 381/551 (69%), Gaps = 14/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF GS+ Y VSGGLHGVG+SVVNALS L V V +DG YHQ++ RGK T
Sbjct: 105 LTVLHAGGKFSGSA--YKVSGGLHGVGMSVVNALSTWLHVEVRKDGNIYHQEFMRGKTKT 162
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + VD ++ GT I F PD ++F + F +T+A R+REL+FLN K++I L
Sbjct: 163 ELAV-IGQVDP-NQTGTTITFSPDPEIFEDTV-FLFDTLAHRLRELSFLNKKVSITL--- 216
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
D +++ Y+ GG+ ++V+++N K+ LH + + F + DG+ +++++Q+ +D Y
Sbjct: 217 -IDAREDKKEVYYHTGGIYDFVKYINRSKESLHPEPIYFEAEKDGVQVEVSMQY-NDGYV 274
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G KA+LTR N +K+ +K + +LSGE +REGLT +I
Sbjct: 275 ENLFSYANNIHTHEGGTHESGFKAALTRVANDYARKNNILKANEANLSGEDIREGLTAVI 334
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP P+FEGQTKT+LGN E+R +VD E L+ + E +P + ++ KS+ A +A
Sbjct: 335 SVKVPEPQFEGQTKTKLGNSEIRSIVDSITGEGLSAFFEENPAIGKKVIEKSIQASRARE 394
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+LPGKLADCS E E++IVEGDSAGGSAKQGRDRRFQAI
Sbjct: 395 AARKARELTRRKSALEVSALPGKLADCSWKEAELCEMYIVEGDSAGGSAKQGRDRRFQAI 454
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + N EI+ +I A+G G+ EDF E RYHK++I+TDADVDG
Sbjct: 455 LPLRGKILNVEKARLDRILGNAEIRAMITAMGTGI-SEDFDIEKARYHKLVIMTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIR LLLTFF+RY K L + +Y+ PPL+KV++GK + Y Y + EL K++ +
Sbjct: 514 AHIRILLLTFFFRYMKPLLENNYVYIAQPPLFKVKKGKDIHYVYSNEELAKLQDEIGRDR 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ IQR+KGLGEM QLWETT++P +R + Q+ +EDA +A+ +F+ LMG V+ R+E I
Sbjct: 574 V-EIQRYKGLGEMNAEQLWETTMDPAKRTILQVTMEDAIKADELFTILMGDVVEPRREFI 632
Query: 542 QNAANLV-NLD 551
Q+ A V NLD
Sbjct: 633 QDNAQYVRNLD 643
>gi|423416596|ref|ZP_17393685.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-1]
gi|401109980|gb|EJQ17896.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-1]
Length = 642
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|392988234|ref|YP_006486827.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
gi|392335654|gb|AFM69936.1| DNA gyrase subunit B [Enterococcus hirae ATCC 9790]
Length = 648
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/533 (49%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V++DG Y+Q+Y RG V L ++ DR GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKDGNVYYQEYRRGAVVDDLKI----IEQTDRNGTTVHFI 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT FD N +A RIRELAFLN + I++ ED E EY + GG++ YV
Sbjct: 179 PDPEIFTETTVFDFNKLATRIRELAFLNRGMKISI--EDKREESPVVKEYHYDGGIKSYV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + IT+++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 237 EYLNANKTVIFPEPVYLEGEQQDITVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A KA LAAKRAR++ R+K L S+LPG
Sbjct: 356 RTVTDRLFSEHFMKFLLENPSVGRQIIEKGLLASKARLAAKRAREVTRRKGALEISNLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 416 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 476 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK++ Y + +LK+V +S P+ S+QR+KGLGEM QL
Sbjct: 535 YVYIAQPPLYGVKQGKKITYVQPGKNAEEDLKQVVASLPATPKPSVQRYKGLGEMDDHQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 595 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|239624129|ref|ZP_04667160.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520515|gb|EEQ60381.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 637
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 276/555 (49%), Positives = 378/555 (68%), Gaps = 14/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q+Y RGK
Sbjct: 92 VVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYKDGDIYQQRYERGK- 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T ++ S D+ GT++ F PDK++F I +D++T+ R+RE AFL L I L
Sbjct: 149 -VTYPLKIVGKCSPDQHGTKVTFLPDKEIFEETI-YDYDTLKIRLRETAFLTKNLRITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
K+D D +K + + + GG++E+V +LN K PL+D V+ +G+ +++++Q +D+
Sbjct: 206 KDDRDEKKEK--TFHYEGGIKEFVTYLNKGKTPLYDQVIYCEGSKEGVYVEVSMQH-NDS 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH+ G K +LT+T N +K+K +KD + SLSGE +REGLT
Sbjct: 263 YTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYARKNKLLKDNEDSLSGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++V P+FEGQTK +LGN E R VD V E LT +LE +P + ++ KS+ A +A
Sbjct: 323 IISIKVEEPQFEGQTKQKLGNSEARSAVDNIVSEQLTYFLEQNPAIAKAMCEKSIMAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK R R Q
Sbjct: 383 RAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKTARSRATQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKIII+TDADV
Sbjct: 443 AILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-EDFDISKLRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K+V Y Y D EL + +
Sbjct: 502 DGAHISTLLLTFLYRFMPELIKQGYVYLAQPPLYKVEKSKKVWYAYSDDELNSILTDIGR 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LMG +V+ R
Sbjct: 562 DTNNKIQRYKGLGEMDAEQLWETTMDPERRVLLRVTLDEETTSEIDLTFTTLMGDQVEPR 621
Query: 538 KELIQ-NAANLVNLD 551
+E I+ NA + NLD
Sbjct: 622 REFIEANAKRVQNLD 636
>gi|75761791|ref|ZP_00741726.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74490724|gb|EAO54005.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 645
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 103 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 161 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 216
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 217 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 271 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 331 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 391 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 451 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 509
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 510 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 569
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 570 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 629
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 630 RNFIQENAKYVKNLD 644
>gi|228911333|ref|ZP_04075137.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200]
gi|423362664|ref|ZP_17340164.1| DNA gyrase subunit B [Bacillus cereus VD022]
gi|423565616|ref|ZP_17541891.1| DNA gyrase subunit B [Bacillus cereus MSX-A1]
gi|228848351|gb|EEM93201.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200]
gi|401076938|gb|EJP85283.1| DNA gyrase subunit B [Bacillus cereus VD022]
gi|401193298|gb|EJR00304.1| DNA gyrase subunit B [Bacillus cereus MSX-A1]
Length = 642
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|229065153|ref|ZP_04200446.1| DNA gyrase subunit B [Bacillus cereus AH603]
gi|228716182|gb|EEL67901.1| DNA gyrase subunit B [Bacillus cereus AH603]
Length = 640
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 378/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN + + +
Sbjct: 156 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLII- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++
Sbjct: 211 --EDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-NEG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 268 YTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A +A
Sbjct: 328 IVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDADV
Sbjct: 448 AILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ + P+
Sbjct: 507 DGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAELPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 567 QPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 627 FIQENAKYVKNLD 639
>gi|325567637|ref|ZP_08144304.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|420261794|ref|ZP_14764438.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
gi|325159070|gb|EGC71216.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
casseliflavus ATCC 12755]
gi|394771728|gb|EJF51489.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus sp. C1]
Length = 649
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/533 (48%), Positives = 362/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV
Sbjct: 180 PDPEIFTETTEFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNASKTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTALTRVINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGF-GADFDVAKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + +LK S P+ ++QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPTVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P+ RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPDNRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|257866280|ref|ZP_05645933.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257873204|ref|ZP_05652857.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
gi|257800238|gb|EEV29266.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30]
gi|257807368|gb|EEV36190.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10]
Length = 649
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/533 (49%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVKVYKEGKVYYQEYHRGAVVDDLKV----IDETDRHGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT F+ + +A R+RELAFLN L I++ ED EK EY + GG++ YV
Sbjct: 180 PDPEIFTETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEKPVLKEYHYDGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K + D + + GIT+++++Q+ +D+Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNASKTVIFPDPIYLEGEQQGITVEVSMQY-TDSYHSNLLSFANNIHTYEGGTHEFGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTALTRVINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ T++L +P+V ++ K L A KA AAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEHFTKFLMENPNVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGF-GADFDVAKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + +LK S P+ ++QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPTVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|145577989|gb|ABP82713.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
gi|145578003|gb|ABP82720.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar vazensis]
gi|145578011|gb|ABP82724.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 149 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|218895146|ref|YP_002443557.1| DNA gyrase subunit B [Bacillus cereus G9842]
gi|228905437|ref|ZP_04069392.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222]
gi|228968646|ref|ZP_04129629.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402562898|ref|YP_006605622.1| DNA gyrase subunit B [Bacillus thuringiensis HD-771]
gi|434378653|ref|YP_006613297.1| DNA gyrase subunit B [Bacillus thuringiensis HD-789]
gi|218542098|gb|ACK94492.1| DNA gyrase, B subunit [Bacillus cereus G9842]
gi|228791075|gb|EEM38693.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228854257|gb|EEM98960.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222]
gi|401791550|gb|AFQ17589.1| DNA gyrase subunit B [Bacillus thuringiensis HD-771]
gi|401877210|gb|AFQ29377.1| DNA gyrase subunit B [Bacillus thuringiensis HD-789]
Length = 640
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|145578025|gb|ABP82731.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 149 AADLKV----IGETDRTGTITRFKPDAEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|452207169|ref|YP_007487291.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
gi|452083269|emb|CCQ36556.1| DNA gyrase subunit B [Natronomonas moolapensis 8.8.11]
Length = 639
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/546 (50%), Positives = 373/546 (68%), Gaps = 9/546 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV + RDG + ++ G+P
Sbjct: 94 VIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSKWLEVEIKRDGAVWRHRFDHGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V ++ + GT IRFWPD +F T F+++T+ R+RELAFLNP + IALR
Sbjct: 152 EADIE-RVREMNPGEGTGTEIRFWPDGDIFETT-AFEYSTLESRLRELAFLNPGVEIALR 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E SD N EY GG+ E+V +LN ++ LH D+V D D I +++A+Q +
Sbjct: 210 DERSDEGTNSVFEY--EGGIREFVAYLNETRELLHEDIVYVEDDADDIHVEIAMQ-ATAG 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GGTH+ G K +LTR +N + + D D +L GE +REGLT
Sbjct: 267 VQGSIHAFANNINTREGGTHLTGFKTALTRIINDYAGSNGLLSDLDGTLKGEDIREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+ P+P+FEGQTKT+LGN +VR +V+ +V E L YLE HPD ++I+SK++ A KA
Sbjct: 327 VISVKHPDPQFEGQTKTKLGNSDVRGIVEGAVHEKLATYLEEHPDTAEAIVSKAVEAAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A +L R+KS L S+SLPGKLADC +PE++E+F+ EGDSAGGSAKQGR+ FQ
Sbjct: 387 RKAAKKAEELTRRKSALESTSLPGKLADCRERSPEDAELFVTEGDSAGGSAKQGRNPEFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + +N EI+NLI A+G G+ GE+F EA RYHK+I+L DADV
Sbjct: 447 AILPIRGKILNVEKHRLDRILENNEIRNLITAIGTGI-GEEFDIEAARYHKVILLCDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YR+ L + G +Y PPLY++ + +AE ++V +
Sbjct: 506 DGAHIRTLLLTFLYRHMTPLIEAGYVYAAQPPLYRIRYNGETYDAMTEAEREEVVADVCG 565
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QRFKGLGEM P QLWETT++P+ R+LK++ +EDAA A+ +FS LMG V RK+
Sbjct: 566 GDPDQVQRFKGLGEMNPEQLWETTMDPDNRILKRITVEDAAAADRMFSVLMGDAVGPRKQ 625
Query: 540 LIQNAA 545
I++ A
Sbjct: 626 FIKDHA 631
>gi|375086659|ref|ZP_09733061.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
gi|291532646|emb|CBL05759.1| DNA gyrase subunit B [Megamonas hypermegale ART12/1]
gi|374564516|gb|EHR35806.1| DNA gyrase, B subunit [Megamonas funiformis YIT 11815]
Length = 665
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/553 (49%), Positives = 382/553 (69%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGGS GY VSGGLHGVG+SVVNALS ++EV V RDG + + +G
Sbjct: 124 VVLTVLHAGGKFGGS--GYKVSGGLHGVGVSVVNALSTNMEVKVKRDGKIHEITFEKG-- 179
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT V V D GT + F PD ++F + +D++T+ R+REL+FLN +TI L
Sbjct: 180 VTKEPLKV--VGQTDETGTLVHFVPDAEIFDETV-YDYDTLRHRLRELSFLNRGITIILT 236
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D PE+ + ++F GG+ +V+ LN +K+ ++ + V F D +++ALQ+ + +
Sbjct: 237 --DERPEEVRQETFYFEGGISSFVEHLNRNKEVINPEPVYFNGTKDTTVVEIALQYNT-S 293
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ + + N+I T +GGTH+ G K++LTR N ++ +K+ + +L GE +REGLTC
Sbjct: 294 YSENIYSFVNNINTEEGGTHLAGFKSALTRAANDFARRQGIIKNNEDNLVGEDIREGLTC 353
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++ P+FEGQTKT+LGN EVR +VD V E L+EY E +P + I+ KS+ A +A
Sbjct: 354 VISIKLREPQFEGQTKTKLGNSEVRGIVDSIVSEGLSEYFEENPVISKKIIEKSIMASRA 413
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 414 REAARKARELTRRKNALEVSSLPGKLADCSVKDPEQAEIYLVEGDSAGGSAKQGRDRRFQ 473
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + NEEI+ +I A G G+ G +F RY KIII+TDADV
Sbjct: 474 AILPLRGKILNVEKARLDKILNNEEIRTMITAFGSGI-GSEFDITKRRYGKIIIMTDADV 532
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L + G +Y+ PPLY++ +G+ Y Y D EL +
Sbjct: 533 DGAHIRTLLLTFFYRYMRPLIENGHVYIAQPPLYQIRKGRSHWYTYSDEELAQKLDEIGR 592
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + ++QR+KGLGEM P QLWETT++PE+R + Q+ + +A EA+ +F+ LMG +V+ R+
Sbjct: 593 DGI-TVQRYKGLGEMNPEQLWETTMDPEKRTVLQVHLREAEEADSIFTILMGDKVEPRRR 651
Query: 540 LIQNAANLV-NLD 551
I+ ANLV NLD
Sbjct: 652 FIEEHANLVRNLD 664
>gi|229100795|ref|ZP_04231614.1| DNA gyrase subunit B [Bacillus cereus Rock3-28]
gi|228682624|gb|EEL36682.1| DNA gyrase subunit B [Bacillus cereus Rock3-28]
Length = 550
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 8 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 65
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 66 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 121
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 122 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 175
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 176 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 235
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 236 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 295
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 296 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 355
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 356 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 414
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 415 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 474
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 475 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 534
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 535 RNFIQENAKYVKNLD 549
>gi|300862234|ref|ZP_07108314.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|428765686|ref|YP_007151797.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
gi|300848759|gb|EFK76516.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11]
gi|427183859|emb|CCO71083.1| DNA gyrase subunit B [Enterococcus faecalis str. Symbioflor 1]
Length = 649
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/533 (49%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F
Sbjct: 124 LHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFI 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +D + +A R+RELAFLN L I++ ED + EY + GG++ YV
Sbjct: 180 PDPEIFTETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K + + V + IT+++++Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNANKDVIFPEPVFIEGEQQDITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTSLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G
Sbjct: 477 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|228994212|ref|ZP_04154112.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442]
gi|228765664|gb|EEM14318.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442]
Length = 640
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 377/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT RF PD ++F ++D +T+A R+RELAFLN + + +
Sbjct: 156 AADLKV----IGETDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNRNIKLII- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++
Sbjct: 211 --EDKRENKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-NEG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 268 YTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A +A
Sbjct: 328 IVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDADV
Sbjct: 448 AILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+
Sbjct: 507 DGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 567 HPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 627 FIQENAKYVKNLD 639
>gi|145577983|gb|ABP82710.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar sotto]
Length = 632
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIARPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|254478916|ref|ZP_05092278.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
gi|214035138|gb|EEB75850.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653]
Length = 654
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 384/552 (69%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q Y RG P T
Sbjct: 117 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSERLEVIVKQRGKVFRQVYERGVPKT 174
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + + GT I F PDK++F I FD++ +A R+RELAFLN + I L E
Sbjct: 175 PLEV----IGETEETGTIITFKPDKEIFE-EIVFDYDILAQRLRELAFLNKGINIKLIDE 229
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
D ++ +N + GGL +V++LN +K+ LH+ + K+ D +++ +Q+ +D+Y
Sbjct: 230 -RDGKEEVFN---YEGGLIAFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEVCMQY-NDSY 283
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G K++LT+ +N KK +KD + +L GE VREGLT I
Sbjct: 284 NENIYSFANNIDTKEGGTHLIGFKSALTKVINDYAKKYGMIKDGEKNLQGEDVREGLTAI 343
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKTRLGNPE+R +V+ V E L+ YLE +P V I+ K+L A +A
Sbjct: 344 VSVKLKNPQFEGQTKTRLGNPEMRSIVEGVVTEKLSAYLEENPSVARIIVEKALQAARAR 403
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+FIVEGDSAGGSAK GR+ RFQA
Sbjct: 404 EAARKARELTRRKSALENTALPGKLADCSEKDPSKCELFIVEGDSAGGSAKAGRNSRFQA 463
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+++I ALG G+ GEDF LRYHK+II+TDADVD
Sbjct: 464 ILPLRGKILNVEKARLDKILSNEEIRSIITALGTGI-GEDFDISKLRYHKVIIMTDADVD 522
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+R+ K L + G IY+ PPLYK+ +GK+V Y Y D EL K+ S
Sbjct: 523 GSHIRTLLLTFFFRFMKPLIENGHIYIAQPPLYKITKGKKVYYAYSDRELDKILSEIGRE 582
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ +QR+KGLGEM QLWETT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 583 NIV-VQRYKGLGEMNADQLWETTMDPEKRTMLKVTLEDAIAADEIFTILMGDKVEPRREF 641
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 642 IEKYAKTVRNLD 653
>gi|357051619|ref|ZP_09112793.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
gi|355379543|gb|EHG26700.1| DNA gyrase subunit B [Enterococcus saccharolyticus 30_1]
Length = 649
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/533 (49%), Positives = 360/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V+++G Y+Q+Y RG V L +D DR GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVKVYKEGKVYYQEYHRGAVVEDLKV----IDETDRHGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT F+ + +A R+RELAFLN L I++ ED E EY + GG++ YV
Sbjct: 180 PDPEIFTETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEHPVLKEYHYDGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K + + + + GIT++++LQ+ +D+Y + +L +AN+I T +GGTH G
Sbjct: 238 EHLNASKTVIFPEPIYLEGEQQGITVEVSLQY-TDSYHNNLLSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTALTRVINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ T++L +P V ++ K L A KA AAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEHFTKFLMENPAVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + +LK S P+ S+QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPSVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|229015410|ref|ZP_04172416.1| DNA gyrase subunit B [Bacillus cereus AH1273]
gi|229026934|ref|ZP_04183257.1| DNA gyrase subunit B [Bacillus cereus AH1272]
gi|228734392|gb|EEL85063.1| DNA gyrase subunit B [Bacillus cereus AH1272]
gi|228745889|gb|EEL95885.1| DNA gyrase subunit B [Bacillus cereus AH1273]
Length = 640
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+++ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELERILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|227518104|ref|ZP_03948153.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227555689|ref|ZP_03985736.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229547125|ref|ZP_04435850.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|229550695|ref|ZP_04439420.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|255974526|ref|ZP_05425112.1| subunit B [Enterococcus faecalis T2]
gi|256618523|ref|ZP_05475369.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256761858|ref|ZP_05502438.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256854985|ref|ZP_05560346.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256957011|ref|ZP_05561182.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256960820|ref|ZP_05564991.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256963987|ref|ZP_05568158.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|257078688|ref|ZP_05573049.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|257081351|ref|ZP_05575712.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|257084008|ref|ZP_05578369.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|257087838|ref|ZP_05582199.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|257088490|ref|ZP_05582851.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257417430|ref|ZP_05594424.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257421347|ref|ZP_05598337.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|293382658|ref|ZP_06628586.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|293387930|ref|ZP_06632466.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294781253|ref|ZP_06746600.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|307268921|ref|ZP_07550285.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|307274016|ref|ZP_07555226.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|307276495|ref|ZP_07557615.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|307284063|ref|ZP_07564233.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|307287177|ref|ZP_07567248.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|307296594|ref|ZP_07576414.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|312901292|ref|ZP_07760575.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|312903111|ref|ZP_07762292.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|312908810|ref|ZP_07767749.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|312951716|ref|ZP_07770610.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|312979548|ref|ZP_07791230.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|384511969|ref|YP_005707062.1| DNA topoisomerase subunit B [Enterococcus faecalis OG1RF]
gi|384517111|ref|YP_005704416.1| DNA gyrase subunit B [Enterococcus faecalis 62]
gi|397698588|ref|YP_006536376.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|421514187|ref|ZP_15960879.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|422685146|ref|ZP_16743370.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|422688143|ref|ZP_16746303.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|422691568|ref|ZP_16749602.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|422694316|ref|ZP_16752309.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|422697302|ref|ZP_16755247.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|422701013|ref|ZP_16758855.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|422702817|ref|ZP_16760646.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|422707514|ref|ZP_16765207.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|422709081|ref|ZP_16766595.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|422713181|ref|ZP_16769937.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|422717804|ref|ZP_16774478.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|422719193|ref|ZP_16775841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|422723320|ref|ZP_16779858.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|422726393|ref|ZP_16782841.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|422728188|ref|ZP_16784606.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|422730566|ref|ZP_16786955.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|422734914|ref|ZP_16791194.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|422741701|ref|ZP_16795724.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|422868246|ref|ZP_16914793.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|424671212|ref|ZP_18108224.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|424683876|ref|ZP_18120621.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|424685955|ref|ZP_18122632.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|424689103|ref|ZP_18125694.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|424692845|ref|ZP_18129320.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|424696423|ref|ZP_18132774.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|424699254|ref|ZP_18135482.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|424704132|ref|ZP_18140238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|424707526|ref|ZP_18143505.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|424716672|ref|ZP_18145975.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|424719090|ref|ZP_18148314.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|424722657|ref|ZP_18151696.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|424726151|ref|ZP_18154831.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|424734721|ref|ZP_18163210.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|424749321|ref|ZP_18177433.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|424757653|ref|ZP_18185389.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|430362672|ref|ZP_19427149.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|430367112|ref|ZP_19427775.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
gi|15982567|dbj|BAB69478.1| DNA gyrase B subunit [Enterococcus faecalis]
gi|227074438|gb|EEI12401.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104]
gi|227175199|gb|EEI56171.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22]
gi|229304128|gb|EEN70124.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC
29200]
gi|229307707|gb|EEN73694.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322]
gi|255967398|gb|EET98020.1| subunit B [Enterococcus faecalis T2]
gi|256598050|gb|EEU17226.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200]
gi|256683109|gb|EEU22804.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3]
gi|256709498|gb|EEU24545.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8]
gi|256947507|gb|EEU64139.1| DNA gyrase subunit B [Enterococcus faecalis DS5]
gi|256951316|gb|EEU67948.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96]
gi|256954483|gb|EEU71115.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704]
gi|256986718|gb|EEU74020.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1]
gi|256989381|gb|EEU76683.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol]
gi|256992038|gb|EEU79340.1| DNA gyrase subunit B [Enterococcus faecalis Fly1]
gi|256995868|gb|EEU83170.1| DNA gyrase subunit B [Enterococcus faecalis D6]
gi|256997302|gb|EEU83822.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188]
gi|257159258|gb|EEU89218.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG]
gi|257163171|gb|EEU93131.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98]
gi|291079964|gb|EFE17328.1| DNA gyrase, B subunit [Enterococcus faecalis R712]
gi|291082667|gb|EFE19630.1| DNA gyrase, B subunit [Enterococcus faecalis S613]
gi|294451716|gb|EFG20171.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1]
gi|295112344|emb|CBL30981.1| DNA gyrase subunit B [Enterococcus sp. 7L76]
gi|306495930|gb|EFM65518.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411]
gi|306501775|gb|EFM71066.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109]
gi|306503434|gb|EFM72683.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860]
gi|306506822|gb|EFM75972.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134]
gi|306509324|gb|EFM78384.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855]
gi|306514729|gb|EFM83280.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248]
gi|310625248|gb|EFQ08531.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512]
gi|310630289|gb|EFQ13572.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102]
gi|310633502|gb|EFQ16785.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635]
gi|311287730|gb|EFQ66286.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516]
gi|311291669|gb|EFQ70225.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470]
gi|315026673|gb|EFT38605.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137]
gi|315030118|gb|EFT42050.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000]
gi|315033552|gb|EFT45484.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017]
gi|315036375|gb|EFT48307.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027]
gi|315143591|gb|EFT87607.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141]
gi|315148271|gb|EFT92287.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244]
gi|315151295|gb|EFT95311.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012]
gi|315153721|gb|EFT97737.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031]
gi|315155119|gb|EFT99135.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043]
gi|315158751|gb|EFU02768.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312]
gi|315163335|gb|EFU07352.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645]
gi|315165723|gb|EFU09740.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302]
gi|315168224|gb|EFU12241.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341]
gi|315170508|gb|EFU14525.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342]
gi|315174178|gb|EFU18195.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346]
gi|315573987|gb|EFU86178.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B]
gi|315578843|gb|EFU91034.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630]
gi|315581938|gb|EFU94129.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A]
gi|323479244|gb|ADX78683.1| DNA gyrase, B subunit [Enterococcus faecalis 62]
gi|327533858|gb|AEA92692.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
faecalis OG1RF]
gi|329576322|gb|EGG57837.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467]
gi|397335227|gb|AFO42899.1| DNA gyrase, B subunit [Enterococcus faecalis D32]
gi|401672707|gb|EJS79173.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 29212]
gi|402359313|gb|EJU93949.1| DNA gyrase, B subunit [Enterococcus faecalis 599]
gi|402363750|gb|EJU98209.1| DNA gyrase, B subunit [Enterococcus faecalis ERV129]
gi|402368565|gb|EJV02877.1| DNA gyrase, B subunit [Enterococcus faecalis ERV25]
gi|402369341|gb|EJV03626.1| DNA gyrase, B subunit [Enterococcus faecalis ERV31]
gi|402376725|gb|EJV10651.1| DNA gyrase, B subunit [Enterococcus faecalis ERV37]
gi|402376743|gb|EJV10666.1| DNA gyrase, B subunit [Enterococcus faecalis ERV62]
gi|402377901|gb|EJV11789.1| DNA gyrase, B subunit [Enterococcus faecalis ERV41]
gi|402382703|gb|EJV16353.1| DNA gyrase, B subunit [Enterococcus faecalis ERV63]
gi|402384310|gb|EJV17868.1| DNA gyrase, B subunit [Enterococcus faecalis ERV65]
gi|402387286|gb|EJV20771.1| DNA gyrase, B subunit [Enterococcus faecalis ERV68]
gi|402397208|gb|EJV30238.1| DNA gyrase, B subunit [Enterococcus faecalis ERV72]
gi|402400529|gb|EJV33351.1| DNA gyrase, B subunit [Enterococcus faecalis ERV81]
gi|402401442|gb|EJV34216.1| DNA gyrase, B subunit [Enterococcus faecalis ERV73]
gi|402406399|gb|EJV38956.1| DNA gyrase, B subunit [Enterococcus faecalis ERV85]
gi|402406469|gb|EJV39020.1| DNA gyrase, B subunit [Enterococcus faecalis R508]
gi|402407982|gb|EJV40478.1| DNA gyrase, B subunit [Enterococcus faecalis ERV93]
gi|429511943|gb|ELA01563.1| DNA gyrase, B subunit [Enterococcus faecalis OG1X]
gi|429516769|gb|ELA06246.1| DNA gyrase, B subunit [Enterococcus faecalis M7]
Length = 649
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/533 (48%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F
Sbjct: 124 LHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFI 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +D + +A R+RELAFLN L I++ ED + EY + GG++ YV
Sbjct: 180 PDPEIFTETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K + + + + IT+++++Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNANKDVIFPEPIFIEGEQQDITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTSLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G
Sbjct: 477 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|423388220|ref|ZP_17365446.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-3]
gi|401643408|gb|EJS61105.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-3]
Length = 642
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+++ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELERILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|255971553|ref|ZP_05422139.1| DNA gyrase subunit B [Enterococcus faecalis T1]
gi|255962571|gb|EET95047.1| DNA gyrase subunit B [Enterococcus faecalis T1]
Length = 649
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/537 (49%), Positives = 365/537 (67%), Gaps = 22/537 (4%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F
Sbjct: 124 LHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFI 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +D + +A R+RELAFLN L I++ ED + EY + GG++ YV
Sbjct: 180 PDPEIFTETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYV 237
Query: 145 QWLNTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 199
+ LN +K +P+ + G ++D IT+++++Q+ +D Y +L +AN+I T +GGTH
Sbjct: 238 EHLNANKDVIFPEPIF-IEGEQQD---ITVEVSMQY-ADGYHSNILSFANNIHTYEGGTH 292
Query: 200 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 259
G K SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LG
Sbjct: 293 ESGFKTSLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLG 352
Query: 260 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 319
N EVR V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S
Sbjct: 353 NSEVRTVTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEIS 412
Query: 320 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 379
+LPGKLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ +
Sbjct: 413 NLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKI 472
Query: 380 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 439
NEEI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + +
Sbjct: 473 LANEEIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPI 531
Query: 440 FDEGCIYVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMM 495
+ G +Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM
Sbjct: 532 VEAGYVYIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMD 591
Query: 496 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
QLWETT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 592 DHQLWETTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|228942642|ref|ZP_04105174.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228975572|ref|ZP_04136124.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228982208|ref|ZP_04142497.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|410672382|ref|YP_006924753.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|423376715|ref|ZP_17353999.1| DNA gyrase subunit B [Bacillus cereus BAG1O-2]
gi|423386975|ref|ZP_17364230.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-2]
gi|423439810|ref|ZP_17416716.1| DNA gyrase subunit B [Bacillus cereus BAG4X2-1]
gi|423450029|ref|ZP_17426908.1| DNA gyrase subunit B [Bacillus cereus BAG5O-1]
gi|423462881|ref|ZP_17439649.1| DNA gyrase subunit B [Bacillus cereus BAG6O-1]
gi|423526693|ref|ZP_17503138.1| DNA gyrase subunit B [Bacillus cereus HuB1-1]
gi|423532238|ref|ZP_17508656.1| DNA gyrase subunit B [Bacillus cereus HuB2-9]
gi|423542492|ref|ZP_17518882.1| DNA gyrase subunit B [Bacillus cereus HuB4-10]
gi|423548723|ref|ZP_17525081.1| DNA gyrase subunit B [Bacillus cereus HuB5-5]
gi|423618807|ref|ZP_17594640.1| DNA gyrase subunit B [Bacillus cereus VD115]
gi|423621470|ref|ZP_17597248.1| DNA gyrase subunit B [Bacillus cereus VD148]
gi|228777560|gb|EEM25838.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
gi|228784182|gb|EEM32209.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817068|gb|EEM63161.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|401127327|gb|EJQ35054.1| DNA gyrase subunit B [Bacillus cereus BAG5O-1]
gi|401168739|gb|EJQ75998.1| DNA gyrase subunit B [Bacillus cereus HuB4-10]
gi|401174840|gb|EJQ82047.1| DNA gyrase subunit B [Bacillus cereus HuB5-5]
gi|401252283|gb|EJR58544.1| DNA gyrase subunit B [Bacillus cereus VD115]
gi|401263225|gb|EJR69354.1| DNA gyrase subunit B [Bacillus cereus VD148]
gi|401630827|gb|EJS48625.1| DNA gyrase subunit B [Bacillus cereus BAG1X1-2]
gi|401640960|gb|EJS58685.1| DNA gyrase subunit B [Bacillus cereus BAG1O-2]
gi|402421442|gb|EJV53695.1| DNA gyrase subunit B [Bacillus cereus BAG4X2-1]
gi|402422690|gb|EJV54918.1| DNA gyrase subunit B [Bacillus cereus BAG6O-1]
gi|402454565|gb|EJV86355.1| DNA gyrase subunit B [Bacillus cereus HuB1-1]
gi|402465099|gb|EJV96783.1| DNA gyrase subunit B [Bacillus cereus HuB2-9]
gi|409171511|gb|AFV15816.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407]
Length = 642
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|229164444|ref|ZP_04292372.1| DNA gyrase subunit B [Bacillus cereus R309803]
gi|228619049|gb|EEK75947.1| DNA gyrase subunit B [Bacillus cereus R309803]
Length = 640
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|145578015|gb|ABP82726.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar ostriniae]
Length = 632
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKLGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|229099920|ref|ZP_04230843.1| DNA gyrase subunit B [Bacillus cereus Rock3-29]
gi|229118983|ref|ZP_04248328.1| DNA gyrase subunit B [Bacillus cereus Rock1-3]
gi|384184093|ref|YP_005569989.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis
CT-43]
gi|407707961|ref|YP_006831546.1| hypothetical protein MC28_4725 [Bacillus thuringiensis MC28]
gi|452196386|ref|YP_007476467.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228664508|gb|EEL20004.1| DNA gyrase subunit B [Bacillus cereus Rock1-3]
gi|228683535|gb|EEL37490.1| DNA gyrase subunit B [Bacillus cereus Rock3-29]
gi|326937802|gb|AEA13698.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis
CT-43]
gi|407385646|gb|AFU16147.1| DNA gyrase subunit B [Bacillus thuringiensis MC28]
gi|452101779|gb|AGF98718.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 640
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|334127015|ref|ZP_08500951.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
gi|333390317|gb|EGK61457.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Centipeda
periodontii DSM 2778]
Length = 684
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 374/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS ++V V RDG + ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSEMDVEVRRDGKIHAISFARG-- 198
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 199 VTVEKLH--EIGTSETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 --DERGEEERRETFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGEDVREGLTC 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P V +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPTVTKKVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|423556993|ref|ZP_17533296.1| DNA gyrase subunit B [Bacillus cereus MC67]
gi|401193768|gb|EJR00770.1| DNA gyrase subunit B [Bacillus cereus MC67]
Length = 642
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSIELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 158 AADLKV----IGETDRTGTITRFKPDAEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|329767180|ref|ZP_08258707.1| DNA gyrase subunit B [Gemella haemolysans M341]
gi|328836847|gb|EGF86494.1| DNA gyrase subunit B [Gemella haemolysans M341]
Length = 638
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 381/552 (69%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LE +V RDG + K+ RG
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEASVHRDGKIHTMKFERGDV 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +T V + DR GT IRF D ++F +D++ + RIRELAFLN +TI L+
Sbjct: 155 VQGITV----VGNTDRTGTTIRFKADPEIFQETTVYDYDILRTRIRELAFLNKGITIILK 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E EK + +++ GGL EYV+ LN +K LH+ + ++DG +++++Q+ + Y
Sbjct: 211 DEREGQEKEE--TFYYEGGLLEYVEMLNENKDALHEAIYVHGEMDGKEVEISMQYNT-GY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S +L YAN+I T +GGTH G K +LTR +NS GKK+K +KDK+ SL+G+ VREGL I
Sbjct: 268 SSNVLSYANNINTHEGGTHESGFKTALTRIINSYGKKNKLIKDKE-SLTGDDVREGLVAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P + I+ K L A +A
Sbjct: 327 ISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKIAKIIVEKGLQASRAR 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK GR+ +FQA
Sbjct: 387 IAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLGRNSKFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPL+GKILNVE+ + N+E+++LI A+G+G+ GE + LRYHKI+I+TDADVD
Sbjct: 447 ILPLKGKILNVEKVRIDKVLANDEVRSLITAIGMGI-GETLNIDKLRYHKIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+RY + L DEG +Y+ PPLY ++ GK+ YC+ + ELK+ +
Sbjct: 506 GSHIRTLLLTFFFRYMRELIDEGYVYIARPPLYGLKVGKKEFYCHTEEELKQNIEEHAGD 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM +LW+TT++PE R++ Q+ I+DA A+ F +LMG +V+ R++
Sbjct: 566 KKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYQVSIDDAQRADAAFDTLMGEKVEPRRKF 625
Query: 541 IQ-NAANLVNLD 551
I+ NA N++NLD
Sbjct: 626 IEDNALNVINLD 637
>gi|374628575|ref|ZP_09700960.1| DNA gyrase, B subunit [Methanoplanus limicola DSM 2279]
gi|373906688|gb|EHQ34792.1| DNA gyrase, B subunit [Methanoplanus limicola DSM 2279]
Length = 639
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 374/555 (67%), Gaps = 14/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L V V RDG + + RG
Sbjct: 94 VVMTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSTFLNVEVHRDGYIHEMGFERGLV 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L+ V S GT+I F PD +F T + FD++ ++ R+RELAFLN + I +
Sbjct: 152 VNPLSSRVNASSSGPEHGTKITFMPDPLIFET-VTFDYDVLSHRMRELAFLNSGIRIEIA 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD---GITIDLALQWCS 177
E +D E + + + GGL+E+V L + K+ +H V + D + +++ALQ+ S
Sbjct: 211 DERNDFE----DVFHYEGGLKEFVNHLISGKEAIHKDVIYLHTFDEPNKVEVEVALQYSS 266
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
AYS+T+L + NS+ T +GGTH+EG+K++LTR +N K + +K L GE VREGL
Sbjct: 267 -AYSETILTFVNSVNTREGGTHLEGLKSALTRAINKTAKDNNLLKGISTPLRGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
+IS+++ P+FEGQTK RLGN V+ +VD V + LTEY E +P V+ I+ K+L A
Sbjct: 326 NTVISIKIAEPQFEGQTKMRLGNSNVKGIVDSLVYQSLTEYFEENPKVIQIIVQKALGAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++AR+L R+KS L S LPGKLADCS P +SE++IVEGDSAGGSAKQGR R
Sbjct: 386 KAREAARKARELARRKSTLESGGLPGKLADCSERDPAKSEVYIVEGDSAGGSAKQGRSRL 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPLRGKILNVE+ + KN EIQ LI A+G GV GE F E RYH II++TDA
Sbjct: 446 FQAILPLRGKILNVEKASPHKILKNTEIQALISAIGCGV-GESFNVEKARYHHIILMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHI TLLLTFFYRY L ++G IY+ PPLY++ +GK +Y + + E++ + +
Sbjct: 505 DVDGAHICTLLLTFFYRYMPDLIEKGYIYIAQPPLYRIAKGKMEKYAFKEEEMRAAIAEY 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ SIQR+KGLGEM QLWETT+NPE R+LKQ+ + DA A+ +FS LMG VD R
Sbjct: 565 GEKGV-SIQRYKGLGEMNAEQLWETTMNPETRVLKQVDVMDATYADEIFSKLMGDDVDAR 623
Query: 538 KE-LIQNAANLVNLD 551
+E +I++A + NLD
Sbjct: 624 REFIIRHAKEVTNLD 638
>gi|393809323|gb|AFN25835.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809333|gb|AFN25840.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809337|gb|AFN25842.1| DNA gyrase subunit B [Staphylococcus hominis]
gi|393809341|gb|AFN25844.1| DNA gyrase subunit B [Staphylococcus hominis]
Length = 644
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V + YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHLNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S D+ GT IRF D ++F+ +++ T+ RIRELAFLN ++I LR
Sbjct: 159 QFDLK----EIGSTDKTGTVIRFKADSEIFSETTVYNYETLQKRIRELAFLNKGISITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E+ + Y + GG++ YV+ LN +K+ +HD + + D I +++A+Q+ S
Sbjct: 215 DEREDEEQREDT-YHYEGGIKSYVELLNENKESIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +KD LSGE REGLT
Sbjct: 273 YATNLLSYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKDDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ NP+FEGQTKT+LGN EVR++VD+ E+ +L +P+V I+ K + A +A
Sbjct: 333 VVSIKHGNPQFEGQTKTKLGNSEVRQIVDRLFSEHFERFLYENPNVARIIVEKGIMASRA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K+GRD + Q
Sbjct: 393 RVAAKKAREVTRRKSALEISSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKEGRDSKTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM QLWETT+NPE RM+ Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWQISRYKGLGEMNADQLWETTMNPENRMMLQVKLEDAVEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|29374666|ref|NP_813818.1| DNA gyrase subunit B [Enterococcus faecalis V583]
gi|257418838|ref|ZP_05595832.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
gi|29342124|gb|AAO79890.1| DNA gyrase, B subunit [Enterococcus faecalis V583]
gi|257160666|gb|EEU90626.1| DNA gyrase B gyrB [Enterococcus faecalis T11]
Length = 642
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/533 (48%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F
Sbjct: 117 LHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFI 172
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +D + +A R+RELAFLN L I++ ED + EY + GG++ YV
Sbjct: 173 PDPEIFTETTVYDFDKLATRVRELAFLNRGLHISI--EDRREGQEDKKEYHYEGGIKSYV 230
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K + + + + IT+++++Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 231 EHLNANKDVIFPEPIFIEGEQQDITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGF 289
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EV
Sbjct: 290 KTSLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEV 349
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPG
Sbjct: 350 RTVTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPG 409
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 410 KLADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 469
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G
Sbjct: 470 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAG 528
Query: 444 CIYVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QL
Sbjct: 529 YVYIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQL 588
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 589 WETTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 641
>gi|402835705|ref|ZP_10884268.1| DNA gyrase, B subunit [Mogibacterium sp. CM50]
gi|402273987|gb|EJU23177.1| DNA gyrase, B subunit [Mogibacterium sp. CM50]
Length = 612
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/556 (49%), Positives = 382/556 (68%), Gaps = 17/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I T LHAGGKFG S GY VSGGLHGVG SVVNALS + V V R+G Y Q+Y RGK
Sbjct: 68 VIHTQLHAGGKFG--SGGYKVSGGLHGVGASVVNALSTHMIVEVKRNGKLYRQEYKRGKT 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + + G++ FWPD ++F + F+++ + R+RE+AFLN L I++
Sbjct: 126 VTKLEV----IGTSKDTGSKTTFWPDPEIFDGTV-FEYDILQRRMREMAFLNKGLRISI- 179
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K + + + GG+ E+VQ+LN +K +++ + F + DG +++A+Q+ +D
Sbjct: 180 -EDKREGKEKRESFHYEGGIIEFVQYLNKNKGVVNNKIFYFEYEKDGYEVEVAMQY-TDR 237
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ L YAN+I TI+GG H+ G +A+LTRT+N ++SK +K+ D SL GE VREGLT
Sbjct: 238 YSELTLSYANNINTIEGGFHLMGFRAALTRTVNDYARRSKILKENDDSLQGEDVREGLTA 297
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV++ NP+FEGQTK +LGN EVR V+ ++ E L+ YL+ +P IL K L A +A
Sbjct: 298 IVSVKLTNPQFEGQTKAKLGNSEVRGFVESNMNENLSFYLDENPKEAKLILDKCLKAARA 357
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++ R+ SVL ++SLPGKLADCS P SEIF+VEGDSAGGSAK GRDR+ Q
Sbjct: 358 REAARKAREITRKTSVLETTSLPGKLADCSEKDPALSEIFLVEGDSAGGSAKSGRDRKRQ 417
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPLRGKI+NVE+ + ++EI+N+I A G GV G +F + LRYHKIII+TDADV
Sbjct: 418 AVLPLRGKIINVEKARADRILNSDEIKNMITAFGCGV-GSNFDIDKLRYHKIIIMTDADV 476
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKS 475
DGAHIRTLLLTFFYR+ L ++G +Y PPL++V++GK++ Y Y DAE L ++K+
Sbjct: 477 DGAHIRTLLLTFFYRFMTPLIEKGYVYAAQPPLFRVKQGKEIHYTYSDAEQDKLLAELKA 536
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
S + IQR+KGLGEM QLWETT++ R L Q+ IEDA A+ +F++LMG +V
Sbjct: 537 HNKSTKI-EIQRYKGLGEMDFNQLWETTMDYNHRTLVQIKIEDATAADEIFTTLMGDKVP 595
Query: 536 TRKELIQNAANLVNLD 551
RK+ I++ A LD
Sbjct: 596 PRKKFIEDNARYATLD 611
>gi|423399670|ref|ZP_17376843.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-2]
gi|423461727|ref|ZP_17438523.1| DNA gyrase subunit B [Bacillus cereus BAG5X2-1]
gi|423479640|ref|ZP_17456355.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-1]
gi|401134960|gb|EJQ42566.1| DNA gyrase subunit B [Bacillus cereus BAG5X2-1]
gi|401657791|gb|EJS75296.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-2]
gi|402425235|gb|EJV57390.1| DNA gyrase subunit B [Bacillus cereus BAG6X1-1]
Length = 642
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|424677999|ref|ZP_18114846.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|424679672|ref|ZP_18116489.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
gi|402352698|gb|EJU87539.1| DNA gyrase, B subunit [Enterococcus faecalis ERV103]
gi|402355888|gb|EJU90643.1| DNA gyrase, B subunit [Enterococcus faecalis ERV116]
Length = 649
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/533 (48%), Positives = 361/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS SL+V V++DG Y+Q+Y RG V L ++ DR GT + F
Sbjct: 124 LHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKV----IEETDRHGTTVHFI 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +D + +A R+RELAFLN L I++ ED + EY + GG++ YV
Sbjct: 180 PDPEIFTETTVYDFDKLATRVRELAFLNRGLHISI--EDRRGGQEDKKEYHYEGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K + + + + IT+++++Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNANKDVIFPEPIFIEGEQQDITVEVSMQY-TDGYHSNILSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K SLTR +N +K K +K+ D L+GE VREGLT ++S++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTSLTRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ EY T++L +P V I+ K + A KA LAAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYR+ + + + G
Sbjct: 477 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + + EL KV P++ S+QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE+R++ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|210624032|ref|ZP_03294149.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
gi|210153239|gb|EEA84245.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275]
Length = 633
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 290/552 (52%), Positives = 379/552 (68%), Gaps = 14/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE L V RDG Y Q+Y +G P
Sbjct: 93 VLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSEWLVAEVHRDGKAYRQEYKKGNPQ 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V D GT I F PD +VF I+F +T+ R+REL+FLN + I
Sbjct: 151 TKLEV----VGESDHTGTIISFMPDAEVFD-EIEFSFDTLEYRLRELSFLNKGIKIIF-- 203
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
ED K +Y ++ + GGL EYV++LN + +H D+V K VD +++A+Q+ +D Y
Sbjct: 204 EDKREGKEKYRDFHYTGGLVEYVKFLNKSRTGIHEDIVYIDKKVDDCLVEIAMQY-TDGY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GG+H+ G KA+LT+T+N K++ +KDKD +LSGE +REGLT +
Sbjct: 263 TENIYSFANNINTHEGGSHLAGFKAALTKTINEYAKRNGALKDKDSNLSGEDIREGLTAV 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++P+P+FEGQTKT+LGN +R +VD E L +LE +P+ I+ K+L A +A
Sbjct: 323 VSVKLPDPQFEGQTKTKLGNTFMRGIVDGVTVEELGSFLEENPNTAKVIVDKALRAQRAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRAR+L R+KSVL S+SLPGKLADCS P +SEIF+VEGDSAGGSAKQGRDR QA
Sbjct: 383 EAAKRARELTRRKSVLESTSLPGKLADCSEKDPSKSEIFLVEGDSAGGSAKQGRDRNTQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + ++EI+N+I A G G+ G DF E RYHKIII+TDADVD
Sbjct: 443 ILPLRGKILNVEKSRLDKILASDEIKNMITAYGCGI-GNDFDLEKARYHKIIIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY + L +EG +Y PPLYKV + K+ Y Y D EL + + +
Sbjct: 502 GAHIRTLLLTFFFRYMRPLIEEGYVYAAQPPLYKVTKQKKEYYVYSDKELDDLLNEIGRD 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y IQR+KGLGEM P QLW+TT+NPE R L Q+ IEDAA A+ +FS LMG +V R+E
Sbjct: 562 K-YDIQRYKGLGEMNPEQLWDTTMNPETRTLLQVTIEDAAIADEIFSMLMGDKVAPRREF 620
Query: 541 IQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 621 IQENAKYVRNLD 632
>gi|397690038|ref|YP_006527292.1| DNA gyrase subunit B [Melioribacter roseus P3M]
gi|395811530|gb|AFN74279.1| DNA gyrase subunit B [Melioribacter roseus P3M]
Length = 663
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/581 (47%), Positives = 386/581 (66%), Gaps = 46/581 (7%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE L+V V RDG Y Q+Y RG P
Sbjct: 98 VVMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNALSEWLKVEVRRDGKIYTQEYKRGVP 155
Query: 61 VTTLTCHVLPVDS-----KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKL 115
PV K + GT+I F PDK++F T ++F + +A R+RELA+LN +
Sbjct: 156 QG-------PVKETGTYKKGKSGTKITFKPDKEIFKT-VKFKYEIVAERLRELAYLNKDV 207
Query: 116 TIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQW 175
T+ L E+ E+ +Y F GGL ++V++L+ + PLH + + +G +++A ++
Sbjct: 208 TMILIDENEGIEE----KYHFKGGLIDFVRYLDEQRNPLHKPIYIEGEKEGTPVEVAFEY 263
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVR 234
SD+Y++ + Y N+I TI+GGTH+ G + +LTRT N+ K+K +K+ ISL+GE +
Sbjct: 264 -SDSYNENVHTYVNNINTIEGGTHLVGFRTALTRTFNNYAYKNKLIKENSKISLTGEDFK 322
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+V P+FEGQTKT+LGN EV+ +V+ V E L EYLE +P V I+ KS+
Sbjct: 323 EGLTAVISVKVMEPQFEGQTKTKLGNSEVKSIVESIVGEKLAEYLEENPSVAKKIIEKSV 382
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AA++AR+L+R+K+ L S +LPGKLADCS PE EI+IVEGDSAGGSAKQGR
Sbjct: 383 KAAEAREAARKARELIRRKNALDSLNLPGKLADCSINDPEHCEIYIVEGDSAGGSAKQGR 442
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DRRFQAILP++GKI+NVE+ + +N+EIQ +I A+G G+ GEDF RY KII++
Sbjct: 443 DRRFQAILPIKGKIINVEKAKINKILENQEIQAIISAIGAGI-GEDFDASKSRYGKIILM 501
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----L 470
TDADVDG+HIRTLLLTFFYR+ K L ++G +Y+ PPLYK+++GK+ Y +DD E L
Sbjct: 502 TDADVDGSHIRTLLLTFFYRHMKDLINQGKVYIAQPPLYKIKKGKEEFYAFDDEERDAIL 561
Query: 471 KKVKSSFPSNALYS--------------------IQRFKGLGEMMPVQLWETTLNPEQRM 510
K++K I R+KGLGEM P QLW+TT+NPE R
Sbjct: 562 KRLKGDVKGKEEEEEIADVEETEEQTQKQMKGIVISRYKGLGEMNPEQLWQTTMNPETRT 621
Query: 511 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
+ Q+ +E AA A+ +F +LMG V+ R+E I+ A LD
Sbjct: 622 ILQVNLESAATADKIFETLMGDAVEPRREFIEKHAKYAKLD 662
>gi|229148043|ref|ZP_04276382.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24]
gi|228635468|gb|EEK91959.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24]
Length = 642
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H D V DGI ++++LQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEDPVYVEGSKDGIQVEVSLQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|164510799|emb|CAK18881.1| topoisomerase II subunit B [Staphylococcus intermedius NCTC 11048]
Length = 640
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/552 (50%), Positives = 367/552 (66%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS++LEV V RDG +HQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSDTLEVYVHRDGRIHHQAYHKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V D+ GT IRF D +F +++ T+ RIRELAFLN + I L
Sbjct: 155 AFDLK----QVGDTDQTGTVIRFKADGTIFQETTVYNYETLQKRIRELAFLNKGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ +N +K+PLH+ + + D I +++ALQ+ S
Sbjct: 211 DE-RDEENVREDSYHYEGGIKSYVELINENKEPLHEEPIYVHQTRDDIEVEIALQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH +G K +LTR LN+ G +SK +K+ LSGE REGLT
Sbjct: 269 FATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGAQSKLIKEDKDRLSGEDTREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V I+ K + A +A
Sbjct: 329 VVSIKHGDPQFEGQTKTKLGNSEVRQIVDRVFSELFERFLFEHPQVARIIVEKGIMASRA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P ESEIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RIAAKKAREVTRRKSALDISSLPGKLADCSSKDPSESEIFLVEGDSAGGSTKSGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ ++ A G G+ GE F RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDKILSNNEIRQMVTAFGTGIGGE-FDISKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKEKLNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ F LMG V+ R++
Sbjct: 568 TPKWSIARYKGLGEMNADQLWETTMNPENRAMLQVTLDDAIEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|145578023|gb|ABP82730.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar fukuokaensis]
Length = 632
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PALPKPGIQRYKGLGEMSPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|228995401|ref|ZP_04155073.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17]
gi|229003015|ref|ZP_04160874.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4]
gi|228758243|gb|EEM07429.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4]
gi|228764354|gb|EEM13229.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17]
Length = 640
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 377/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT RF PD ++F ++D +T+A R+RELAFLN + + +
Sbjct: 156 AADLKV----IGETDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNRNIKLII- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ ++
Sbjct: 211 --EDKRENKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVSLQY-NEG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 268 YTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A +A
Sbjct: 328 IVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDADV
Sbjct: 448 AILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+
Sbjct: 507 DGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 567 HPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 627 FIQENAKYVKNLD 639
>gi|410458121|ref|ZP_11311884.1| DNA gyrase subunit B [Bacillus azotoformans LMG 9581]
gi|409931749|gb|EKN68725.1| DNA gyrase subunit B [Bacillus azotoformans LMG 9581]
Length = 641
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 286/554 (51%), Positives = 375/554 (67%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V DG ++ K+ RG
Sbjct: 99 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHLDGKIHYIKFERGAV 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT + F PD ++F ++++ +A R+RELAFLN L + +
Sbjct: 157 VEELKV----IGETDKTGTIVHFSPDPEIFQETTVYEYDVLATRLRELAFLNRGLNLII- 211
Query: 121 KEDSDPE-KNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
ED PE K Q+ + + GG+ YV+ LN ++ +H+ V + DGIT ++ALQ+ +D
Sbjct: 212 -EDKRPEGKTQH--WCYEGGIISYVEHLNRSREVIHEEPVYVMGEKDGITAEVALQY-ND 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y + +AN+I T +GGTH G K +LTR +N +KS K+ D +L+G+ VREGLT
Sbjct: 268 SYVSNIYSFANNIHTYEGGTHEVGFKTALTRVINDYARKSGMFKENDPNLTGDDVREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV+ P+P+FEGQTKT+LGN EVR +VD E L ++L +P V I+ K L A +
Sbjct: 328 TIISVKHPDPQFEGQTKTKLGNSEVRAIVDSVFSEQLDKFLMENPSVGKKIVEKGLMASR 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A +AAK+AR+L R+K L SSLPGKLADCSS SE++IVEGDSAGGSAK GRDR F
Sbjct: 388 ARIAAKKARELTRRKGALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKSGRDRHF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYHKI+I+TDAD
Sbjct: 448 QAILPLRGKILNVEKARLDRILSNNEIRTIITALGTGI-GEDFDISKARYHKIVIMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ K + + G IY+ PPLYKV++GK+V Y Y+D EL+ V + P
Sbjct: 507 VDGAHIRTLLLTFFYRFMKPIIENGYIYIAQPPLYKVQQGKKVIYAYNDRELEAVLAELP 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N S+QR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ VF LMG +V+ R+
Sbjct: 567 DNPKPSLQRYKGLGEMNPEQLWETTMDPEVRTLLQVQLQDAMEADEVFEILMGDQVEPRR 626
Query: 539 ELIQ-NAANLVNLD 551
E IQ NA + NLD
Sbjct: 627 EFIQENARYVKNLD 640
>gi|52145204|ref|YP_081624.1| DNA gyrase subunit B [Bacillus cereus E33L]
gi|229094604|ref|ZP_04225671.1| DNA gyrase subunit B [Bacillus cereus Rock3-42]
gi|229159054|ref|ZP_04287110.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342]
gi|300118805|ref|ZP_07056525.1| DNA gyrase subunit B [Bacillus cereus SJ1]
gi|51978673|gb|AAU20223.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)
[Bacillus cereus E33L]
gi|228624473|gb|EEK81244.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342]
gi|228688851|gb|EEL42682.1| DNA gyrase subunit B [Bacillus cereus Rock3-42]
gi|298723773|gb|EFI64495.1| DNA gyrase subunit B [Bacillus cereus SJ1]
Length = 640
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|284047394|ref|YP_003397733.1| DNA gyrase subunit B [Acidaminococcus fermentans DSM 20731]
gi|283951615|gb|ADB46418.1| DNA gyrase, B subunit [Acidaminococcus fermentans DSM 20731]
Length = 646
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/557 (49%), Positives = 381/557 (68%), Gaps = 21/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFG GY VSGGLHGVG+S VNALS+ + V V ++G Y ++S+GK
Sbjct: 104 VVMTVLHAGGKFG--DGGYKVSGGLHGVGVSCVNALSKKMVVEVKKNGKIYGIEFSKGK- 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
TT +V ++ GT + FWPD +FT + + ++T+ RIRELAFLN + I L
Sbjct: 161 -TTRPLYVKGECPENETGTSVTFWPDDTIFTETV-YSYDTLKHRIRELAFLNKGVKIQL- 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D Q + + GG+ +V+++N K+PLH V G R+D +++A+Q+
Sbjct: 218 ---TDERSGQDEVFHYEGGIVSFVEFVNKGKEPLHAKPIYVEGERQDT---IVEVAMQY- 270
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAY++ + + N+I T +GGTH+ G+K +LTR +N +K+ +KD + +LSG+ VREG
Sbjct: 271 TDAYTENIYTFVNNINTEEGGTHLAGLKQALTRCINDYARKNSLLKDNEDNLSGDDVREG 330
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LTC++S++V P+FEGQTKT+LGN EVR +VD V E LTEY E + V I+ K++ A
Sbjct: 331 LTCVMSLKVREPQFEGQTKTKLGNSEVRGIVDNMVTEALTEYFEENAPVAKKIVEKAIMA 390
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++ARDL R+KS L SSLPGKLADCSS E+EI++VEGDSAGGSAKQGRDR
Sbjct: 391 SRARSAARKARDLTRRKSALEVSSLPGKLADCSSKNAAETEIYLVEGDSAGGSAKQGRDR 450
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ M ++EI+ +I A G G+ G++F RY KIII+TD
Sbjct: 451 NFQAILPLRGKILNVEKARLDKMLNSQEIRAMITAFGCGI-GDEFDIAKARYGKIIIMTD 509
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKS 475
ADVDGAHIRTLLLTFFYRY K L G +++ PPLY + GK+ Y Y D EL +K+
Sbjct: 510 ADVDGAHIRTLLLTFFYRYMKPLIQNGNVFIAQPPLYLIRTGKKHTYAYSDEELQRKLDE 569
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
N Y +QR+KGLGEM P QLWETT++P +R + Q+ +EDAA A+ VFS LMG +V+
Sbjct: 570 VGRQNNPY-VQRYKGLGEMNPEQLWETTMDPSKRTVLQVQLEDAATADSVFSVLMGDKVE 628
Query: 536 TRKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 629 PRRQFIEENAGKVTNLD 645
>gi|145577973|gb|ABP82705.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
weihenstephanensis]
Length = 632
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T A R+RELAFLN KLTI
Sbjct: 149 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTSATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|119355886|ref|YP_910530.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
gi|119353235|gb|ABL64106.1| DNA gyrase subunit B [Chlorobium phaeobacteroides DSM 266]
Length = 643
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/553 (48%), Positives = 370/553 (66%), Gaps = 18/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF S Y VSGGLHGVG SVVNALSE EV V+RDG Y Q++ RG P
Sbjct: 99 LVMTVIGAGGKFDKGS--YKVSGGLHGVGASVVNALSEWCEVEVYRDGKAYFQRFERGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+V + D++GT+ F PD +F T +F + I R+RELAFLN L+I ++
Sbjct: 157 ----QGNVREIGLSDQKGTKTTFKPDNLIFKTT-EFRKDIIIDRMRELAFLNKNLSITVQ 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D E + + GGL+E+V++ + ++ L + + F + D +++ALQ+ +D+
Sbjct: 212 DADGAQEI-----FHYEGGLKEFVRFTDINRLSLIKEPIYFIGERDTTIVEIALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + Y N+I T +GGTH+ G + +LTRTLN +K+ +K+ +SL+G+ +EGLT
Sbjct: 266 YQENVFSYVNNINTHEGGTHVTGFRKALTRTLNLYAQKNDLLKNLKLSLTGDDFKEGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN E + +V+ V E L+E+ E +P+V+ I+ K A +
Sbjct: 326 VISVKVEEPQFEGQTKTKLGNSETQSIVESIVNELLSEFAESNPNVIKMIIEKVKGAAMS 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 REAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+TDADV
Sbjct: 446 AILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSPEKLRYGKIIIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-- 477
DGAHIRTLLLTFF+RY ++L + G +Y+ PPLY V+ GK QY +DD E + +
Sbjct: 506 DGAHIRTLLLTFFFRYMRSLIEAGKVYIAQPPLYLVKSGKDQQYAWDDEERNSITDTLKK 565
Query: 478 --PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
A IQR+KGLGEM P QLW TT++P R L Q+ +E+A EA+ +FS+LMG +V+
Sbjct: 566 MQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLQVSVENAREADQIFSTLMGDKVE 625
Query: 536 TRKELIQNAANLV 548
R+E I+ A V
Sbjct: 626 PRREFIEKNARYV 638
>gi|21675071|ref|NP_663136.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
gi|21648310|gb|AAM73478.1| DNA gyrase subunit B [Chlorobium tepidum TLS]
Length = 647
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/553 (47%), Positives = 377/553 (68%), Gaps = 18/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG + Q Y RG P
Sbjct: 103 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKIFRQTYRRGVP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D++GT++ F PD ++F +F + I R+RELAFLN L I ++
Sbjct: 161 ----QGGVEEIGTTDQRGTKVTFKPDPEIFKIT-EFRKDIILDRMRELAFLNSNLRIIVQ 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDA 179
D E N+ + + GGL+E+V+++++++ L + + + D +++ALQ+ +D+
Sbjct: 216 ----DAEGNE-EIFHYEGGLKEFVRFIDSNRLSLLKEPIFLSGERDSTMVEIALQY-NDS 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ I+L+G+ +EGLT
Sbjct: 270 YQENIFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNVKITLTGDDFKEGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP P+FEGQTKT+LGN E + +V+ V E L E+ E +P L I+ K SA +
Sbjct: 330 VISVKVPEPQFEGQTKTKLGNSETQSIVETIVNEQLAEFAESNPGTLKLIIEKVKSAAIS 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+KSVL SS LPGKLADCS P+ E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 390 REAARKAKELTRRKSVLESSGLPGKLADCSINDPDHCELYIVEGDSAGGSAKQGRDRSFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ +I ALG + E+F E LRY KIII+TDADV
Sbjct: 450 AILPLKGKILNVEKARLHKMLENEEIKTIILALGTSIGEEEFSPEKLRYGKIIIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKS 475
DGAHIRTLLLTFF+RY ++L + G +++ PPLY V+ G++ QY +D+ E ++++K
Sbjct: 510 DGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLVKSGREQQYAWDEDERLSIVEQMKK 569
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
A SIQR+KGLGEM P QLW TT++P R L Q+ +E+A EA+ VFS+LMG +V+
Sbjct: 570 LQKGKANVSIQRYKGLGEMNPEQLWSTTMDPAHRSLLQVTVENAMEADQVFSTLMGDKVE 629
Query: 536 TRKELIQNAANLV 548
R++ I+ A V
Sbjct: 630 PRRDFIEKNARYV 642
>gi|423394308|ref|ZP_17371509.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-1]
gi|423410273|ref|ZP_17387420.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-3]
gi|401648270|gb|EJS65866.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-3]
gi|401658679|gb|EJS76169.1| DNA gyrase subunit B [Bacillus cereus BAG2X1-1]
Length = 642
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 158 AADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|422325721|ref|ZP_16406749.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
gi|371667469|gb|EHO32594.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 6_1_45]
Length = 647
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 386/552 (69%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEV V ++G E+ ++ G
Sbjct: 108 IFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKA 165
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T + ++ ++ G+ +RF D ++F ++D +T+ RIR+LAFLN + + L
Sbjct: 166 TG---PLKIINDSEKHGSIVRFKADPEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCD 222
Query: 122 E-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E +++P++ EY + GG+ +YV++LN +K PLH+ V + + + DGI ++A+Q+ +D
Sbjct: 223 EREAEPKRI---EYKYDGGIRQYVEYLNKNKTPLHEEVVYVEGIEDGILAEIAMQY-NDG 278
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y ++ + N+I T++GGTH +G + +LTR +N+ ++ +K KD +L+G+ VREGLT
Sbjct: 279 YIPSIYSFCNNINTMEGGTHEDGFRLALTRIINAYAREQGMIK-KDETLAGDDVREGLTA 337
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+V + E L + +P+ I+ K++ A KA
Sbjct: 338 IISVKHPDPQYEGQTKTKLGNSEVRKIVSSILGEQLDRFFMENPETAKIIVDKAILASKA 397
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L +SLPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQ
Sbjct: 398 RLAAKKARELTRRKSALEITSLPGKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQ 457
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +++N EI+++I A G G+ GE+ LRYHKIII+TDADV
Sbjct: 458 AILPLRGKILNVEKARLQRIFENNEIRSMITAFGCGI-GEEMDVSKLRYHKIIIMTDADV 516
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LTFFYRY + + + G +Y+ +PPL+KV +G +V+Y Y + E++ V++S
Sbjct: 517 DGAHICTLMLTFFYRYLRPIIEGGYVYIAMPPLFKVAKGNRVEYVYKEEEVETVRASMGD 576
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N ++QR+KGLGEM P QLWETT++P R LKQ+ I+DA EA+ +F LMG V+ R++
Sbjct: 577 NV--NVQRYKGLGEMNPEQLWETTMDPAFRTLKQVNIDDAMEADSIFEMLMGEEVEPRRD 634
Query: 540 LIQNAANLVNLD 551
IQ A LD
Sbjct: 635 FIQENAIYATLD 646
>gi|404486886|ref|ZP_11022074.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
gi|404335940|gb|EJZ62406.1| DNA gyrase, B subunit [Barnesiella intestinihominis YIT 11860]
Length = 651
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/562 (47%), Positives = 381/562 (67%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS L + R+G Y Q+YS GKP
Sbjct: 97 VVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTYLRAEIRRNGKIYMQEYSCGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + + GT I F PD +F+ + +D+N +A R+R+LA+LN +T++L
Sbjct: 155 LHDVEI----IGETEETGTTIIFRPDDSIFSVTV-YDYNILANRLRDLAYLNAGITLSLT 209
Query: 121 KEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ + + +Y E F++ GL+E+V++++++K+ L DV+ + G+ +++A+ + +
Sbjct: 210 DKRTTNDAGEYRKEVFYSKEGLKEFVRYIDSNKEHLIDDVIHIATERQGVPVEVAMTY-N 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
Y++ + Y N+I TI+GGTH+ G + LTRTL + SK ++ + +S + REGL
Sbjct: 269 TTYNENVYSYVNNINTIEGGTHLTGFRRGLTRTLKKYAEDSKMLEKVKVEISSDDFREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VD +V E L YLE HP +I+ K + A
Sbjct: 329 TAVISVKVMEPQFEGQTKTKLGNSEVIGAVDTAVSEALANYLEEHPAQAKTIVEKVIIAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++KS L LPGKLADCSS PE+ EIF+VEGDSAGGSAKQGRDR
Sbjct: 389 TARHAARKAREMVQRKSPLSGGGLPGKLADCSSRNPEDCEIFLVEGDSAGGSAKQGRDRM 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIII 413
FQAILPLRGKILNVE+ + +++++EI N+ +ALG+ + E+ KEA LRYHKIII
Sbjct: 449 FQAILPLRGKILNVEKAMDHKVFESQEISNMFKALGVTIGTEEDSKEANIEKLRYHKIII 508
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKV--ERGKQVQYCYDDAELK 471
+TDADVDGAHI TLLLTFF+R + L ++G +Y+ PPLYK +RGK +YC+ D +
Sbjct: 509 MTDADVDGAHIATLLLTFFFRRMRPLLEQGYVYLATPPLYKCKSKRGKTEEYCWTDQQKD 568
Query: 472 K--VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+ +K + L QR+KGLGEM P QLWETT++PE R+LKQ+ I++AAEA+ VFS L
Sbjct: 569 QFCLKYCEGNEQLMETQRYKGLGEMNPHQLWETTMDPENRILKQVTIDNAAEADRVFSML 628
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I++ A N+D
Sbjct: 629 MGEDVGPRREFIESNATYANID 650
>gi|225862062|ref|YP_002747440.1| DNA gyrase, B subunit [Bacillus cereus 03BB102]
gi|225788933|gb|ACO29150.1| DNA gyrase, B subunit [Bacillus cereus 03BB102]
Length = 640
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|313900991|ref|ZP_07834481.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|346314835|ref|ZP_08856352.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|373123464|ref|ZP_09537310.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
gi|312954411|gb|EFR36089.1| DNA gyrase, B subunit [Clostridium sp. HGF2]
gi|345905773|gb|EGX75510.1| DNA gyrase subunit B [Erysipelotrichaceae bacterium 2_2_44A]
gi|371660797|gb|EHO26041.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 21_3]
Length = 647
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 386/552 (69%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEV V ++G E+ ++ G
Sbjct: 108 IFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVNVHQNGHEFFLRFEDGGKA 165
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T + ++ ++ G+ +RF D ++F ++D +T+ RIR+LAFLN + + L
Sbjct: 166 TG---PLKIINDSEKHGSIVRFKADPEIFQETQEYDFDTLNARIRQLAFLNKSIRLVLCD 222
Query: 122 E-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E +++P++ EY + GG+ +YV++LN +K PLH+ V + + + DGI ++A+Q+ +D
Sbjct: 223 EREAEPKRI---EYKYDGGIRQYVEYLNKNKTPLHEEVVYVEGIEDGILAEIAMQY-NDG 278
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y ++ + N+I T++GGTH +G + +LTR +N+ ++ +K KD +L+G+ VREGLT
Sbjct: 279 YIPSIYSFCNNINTMEGGTHEDGFRLALTRIINAYAREQGMIK-KDETLAGDDVREGLTA 337
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+V + E L + +P+ I+ K++ A KA
Sbjct: 338 IISVKHPDPQYEGQTKTKLGNSEVRKIVSSILGEQLDRFFMENPETAKIIVDKAILASKA 397
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L +SLPGKLADCSS E EI+IVEGDSAGGSAKQGR+ +FQ
Sbjct: 398 RLAAKKARELTRRKSALEITSLPGKLADCSSKDASECEIYIVEGDSAGGSAKQGRNSKFQ 457
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +++N EI+++I A G G+ GE+ LRYHKIII+TDADV
Sbjct: 458 AILPLRGKILNVEKARLQRIFENNEIRSMITAFGCGI-GEEMDVSKLRYHKIIIMTDADV 516
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TL+LTFFYRY + + + G +Y+ +PPL+KV +G +V+Y Y + E++ V++S
Sbjct: 517 DGAHICTLMLTFFYRYLRPIIEGGYVYIAMPPLFKVAKGNRVEYVYKEEEVETVRASMGE 576
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N ++QR+KGLGEM P QLWETT++P R LKQ+ I+DA EA+ +F LMG V+ R++
Sbjct: 577 NV--NVQRYKGLGEMNPEQLWETTMDPAFRTLKQVNIDDAMEADSIFEMLMGEEVEPRRD 634
Query: 540 LIQNAANLVNLD 551
IQ A LD
Sbjct: 635 FIQENAIYATLD 646
>gi|162446893|ref|YP_001620025.1| DNA gyrase subunit B [Acholeplasma laidlawii PG-8A]
gi|161985000|gb|ABX80649.1| DNA gyrase, subunit B [Acholeplasma laidlawii PG-8A]
Length = 635
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/545 (49%), Positives = 357/545 (65%), Gaps = 15/545 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+T LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y QKY RG P
Sbjct: 97 ILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQKYERGIPA 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L S D+ GT I F D +FT + +++ T+ RI++LAFLN L + L
Sbjct: 155 YDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNKGLKLNLI- 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA+Q+ D+Y
Sbjct: 210 -DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELAMQFV-DSY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + + N+I T +GG H +G K +LTR ++ K KD S+SGE REGLT I
Sbjct: 268 SPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGEDTREGLTAI 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K L A +A
Sbjct: 326 ISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEKVLLATRAR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQGRD FQA
Sbjct: 386 VAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQGRDSEFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
I+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+I+TDADVD
Sbjct: 446 IMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIVIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL ++ + +
Sbjct: 505 GAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNELLKTIETK 564
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG V+ RKE
Sbjct: 565 P--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGEEVEPRKEF 622
Query: 541 IQNAA 545
IQN A
Sbjct: 623 IQNNA 627
>gi|145577999|gb|ABP82718.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar roskildiensis]
Length = 632
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 ERYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|229035151|ref|ZP_04189097.1| DNA gyrase subunit B [Bacillus cereus AH1271]
gi|228728217|gb|EEL79247.1| DNA gyrase subunit B [Bacillus cereus AH1271]
Length = 640
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/553 (50%), Positives = 378/553 (68%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN + + +
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNRNIKLII- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++
Sbjct: 211 --EDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEG 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 268 YTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A +A
Sbjct: 328 IVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 388 RVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDADV
Sbjct: 448 AILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+
Sbjct: 507 DGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 567 QPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRN 626
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 627 FIQENAKYVKNLD 639
>gi|401563979|ref|ZP_10804902.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
gi|400189260|gb|EJO23366.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC6]
Length = 684
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 375/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS +++V V RDG + ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSTMDVEVRRDGEIHAISFARG-- 198
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 199 VTQEKLHT--IGTCETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 --DERGEEERRETFHFDGGIRSFVAHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGEDVREGLTC 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E L EY E +P V +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLMEYFEENPAVTKRVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y DAE +K
Sbjct: 552 DGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKDKKHFYTYSDAEQEKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 EGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|308066844|ref|YP_003868449.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
gi|305856123|gb|ADM67911.1| DNA gyrase subunit B [Paenibacillus polymyxa E681]
Length = 636
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/556 (50%), Positives = 380/556 (68%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKMIVHVKRDGHLYEQEYHRGAP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D GT+ F+PD Q+FT +D++T+ RIRELAFLN + I+L
Sbjct: 153 ----QYDVRVIGDTDETGTQTTFYPDDQIFTETTVYDYDTLQTRIRELAFLNKGIAISL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D + + + GG+ EYVQ+LN ++ LH+ V G R D I +++ALQ+
Sbjct: 208 ---TDERTGASDTFHYEGGISEYVQFLNQKREALHEQPIYVEGSR---DMIQVEVALQY- 260
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+G+ VREG
Sbjct: 261 NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDNNANLTGDDVREG 320
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V ++ KSL A
Sbjct: 321 LTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRVVDKSLQA 380
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 381 ARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 440
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYHK+II+TD
Sbjct: 441 HFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDIAKARYHKVIIMTD 499
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + D G IY+ PPL+KVER K V+Y +AE ++
Sbjct: 500 ADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIAQPPLFKVERNKVVRYANSEAERDEIIRE 559
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y++QR+KGLGEM QLWETT++PE R + Q+ + DA A+ +F++LMG V+
Sbjct: 560 FGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTVSDAMLADTLFNTLMGDNVEP 619
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 620 RRDFIQEHAKYVKNLD 635
>gi|145577969|gb|ABP82703.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 376/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT RF PD ++F ++D +T+A R+RELAFLN + + +
Sbjct: 149 AADLKV----IGETDHTGTITRFKPDPEIFKETTEYDFDTLATRMRELAFLNRNIKLII- 203
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ E Q E+ + GG++ YV+ LN K P+H+ V DGI ++++LQ+ ++
Sbjct: 204 --EDKRENKQKKEFHYEGGIKSYVEHLNRSKAPIHEEPVYVEGSKDGIQVEVSLQY-NEG 260
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 261 YTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTA 320
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A +A
Sbjct: 321 IVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARA 380
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 381 RVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQGRDRHFQ 440
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDADV
Sbjct: 441 AILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIITDADV 499
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+
Sbjct: 500 DGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPA 559
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 560 HPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRN 619
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 620 FIQENAKYVKNLD 632
>gi|78707359|gb|ABB46485.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707361|gb|ABB46486.1| DNA gyrase subunit B [Acholeplasma laidlawii]
gi|78707363|gb|ABB46487.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/545 (49%), Positives = 357/545 (65%), Gaps = 15/545 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+T LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y QKY RG P
Sbjct: 93 ILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQKYERGIPA 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L S D+ GT I F D +FT + +++ T+ RI++LAFLN L + L
Sbjct: 151 YDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNKGLKLNLI- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA+Q+ D+Y
Sbjct: 206 -DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELAMQFV-DSY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + + N+I T +GG H +G K +LTR ++ K KD S+SGE REGLT I
Sbjct: 264 SPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGEDTREGLTAI 321
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K L A +A
Sbjct: 322 ISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEKVLLATRAR 381
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQGRD FQA
Sbjct: 382 VAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQGRDSEFQA 441
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
I+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+I+TDADVD
Sbjct: 442 IMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIVIMTDADVD 500
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL ++ + +
Sbjct: 501 GAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNELLKTIETK 560
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG V+ RKE
Sbjct: 561 P--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGEEVEPRKEF 618
Query: 541 IQNAA 545
IQN A
Sbjct: 619 IQNNA 623
>gi|397905911|ref|ZP_10506745.1| DNA gyrase subunit B [Caloramator australicus RC3]
gi|397161079|emb|CCJ34080.1| DNA gyrase subunit B [Caloramator australicus RC3]
Length = 631
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 380/553 (68%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAG KFGG S LHGVG SVVNALS+ L V V RDG + QKY RGKP
Sbjct: 92 VVFTVLHAGSKFGGGGYKVSGG--LHGVGASVVNALSKWLIVEVKRDGKIFRQKYERGKP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ L + + GT++ F D ++F T +++++ ++ R+RELAFLN + I L
Sbjct: 150 VSELEV----IGEAEETGTKVTFLADDEIFETT-EYEYDVLSQRLRELAFLNKGIAINLI 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D ++ Y + GG++E+V++LN +K+ LHD + F D +++ALQ+ +D
Sbjct: 205 DERVDKKET----YHYEGGIKEFVKYLNRNKEVLHDEPIYFEASKDDTVVEIALQY-NDG 259
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH+ G K +LT+ +N +K +K+ + +L GE REG+T
Sbjct: 260 YNENIFSFANNISTTEGGTHVSGFKTALTKVINDYARKYGFLKENEKNLQGEDTREGITA 319
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ NPEFEGQTKT+LGN EVR +VD V + ++ +LE +P V I+ K L A +A
Sbjct: 320 VISVKITNPEFEGQTKTKLGNTEVRGIVDAIVTDKVSAFLEENPSVAKVIVEKCLLASRA 379
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+VL ++SLPGKLADCS P+ EIF+VEGDSAGGSAK GRDRRFQ
Sbjct: 380 REAARKARELTRRKNVLENTSLPGKLADCSEKDPKLCEIFLVEGDSAGGSAKGGRDRRFQ 439
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + +EI+N+I A G G+ G+DF E +RY KIII+TDADV
Sbjct: 440 AILPLRGKIMNVEKQRLDKILAYQEIRNMITAFGAGI-GDDFDIEKIRYDKIIIMTDADV 498
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L +EG +Y+ PPLYK+ +GK + Y Y D EL+ +
Sbjct: 499 DGAHIRTLLLTFFYRYMRPLIEEGHVYIAQPPLYKISKGKNIYYAYSDRELEAKLNEIGR 558
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + IQR+KGLGEM QLWETT+NPE R L ++ IEDA EA+ VF+ LMG +V+ R+E
Sbjct: 559 DNV-EIQRYKGLGEMNAEQLWETTMNPETRTLLKVTIEDAVEADEVFTILMGDKVEPRRE 617
Query: 540 LIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 618 FIQKNAKRVQNLD 630
>gi|452992024|emb|CCQ96561.1| DNA gyrase (subunit B) [Clostridium ultunense Esp]
Length = 637
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/551 (49%), Positives = 377/551 (68%), Gaps = 11/551 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF GY VSGGLHGVGLSVVNALSE L V ++G Y Q Y RG P
Sbjct: 96 VLTVLHAGGKF--GGKGYKVSGGLHGVGLSVVNALSEELVAEVKKEGKMYRQTYHRGVPE 153
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L ++ S + GT I F PD ++FT +FD++ + RIRELAFLN + + L
Sbjct: 154 GPLK--IVGEISPEISGTTITFKPDPEIFTETTEFDYDVLQSRIRELAFLNKGIKLTL-- 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYS 181
+D N+ E+ + GG+ E+V +LN ++ LH + +GI +++A+Q+ D +S
Sbjct: 210 --TDERTNRREEFHYEGGIAEFVLFLNKNRNVLHSPIYMHDQREGIDVEIAIQY-HDEFS 266
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ +AN+I T +GGTH G K LTR +N +K+ +K+ + +L+G+ VREGLT II
Sbjct: 267 TNLYSFANNIHTHEGGTHEVGFKTGLTRVINDYARKNNLLKENEENLTGDDVREGLTAII 326
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++P P+FEGQTKT+LGN E + + + E+ + +L+ +P V I+ K++ A +A
Sbjct: 327 SVKIPEPQFEGQTKTKLGNSEAKTITESLFSEHFSTFLDENPSVAKKIIEKAVLASRARE 386
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+K+ L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQAI
Sbjct: 387 AARKARELTRRKNALEVSSLPGKLADCSSRDASISELYIVEGDSAGGSAKQGRDRNFQAI 446
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + NEEI+ +I ALG G+ G++ RYHKIII+TDADVDG
Sbjct: 447 LPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDELDITKARYHKIIIMTDADVDG 505
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIRTLLLTFFYR+ +TL + G IY+ PPLY++ +GK+V Y Y ++EL+KVK S
Sbjct: 506 AHIRTLLLTFFYRHMRTLVENGFIYIAQPPLYRISQGKKVLYAYKESELEKVKKSLQGKG 565
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
IQR+KGLGEM P QLWETT+NP+ R+L ++ +EDA EA+ +F +LMG RV+ R++ I
Sbjct: 566 EIEIQRYKGLGEMDPEQLWETTMNPKNRILLRVHLEDAMEADQIFDTLMGDRVEPRRDFI 625
Query: 542 QNAANLV-NLD 551
+ A+ V NLD
Sbjct: 626 HDHAHYVRNLD 636
>gi|357039045|ref|ZP_09100840.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
gi|355358509|gb|EHG06275.1| DNA gyrase, B subunit [Desulfotomaculum gibsoniae DSM 7213]
Length = 633
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/528 (51%), Positives = 362/528 (68%), Gaps = 13/528 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE LEV V RDG YHQ++ RG VT+L + GT++ F
Sbjct: 117 LHGVGVSVVNALSEWLEVEVRRDGFIYHQRFERGVSVTSLKT----IGKAKNTGTKVTFK 172
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F ++F +T+ R+REL+FL + I E ++ Q Y +GG+ ++V
Sbjct: 173 PDPEIFE-ELEFSQDTLVQRLRELSFLTKGVKITFIDERTE----QQCVYQHSGGIRDFV 227
Query: 145 QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVK 204
+LN +K H V F D I +++A Q+ +D + + + Y N+I TIDGGTH G +
Sbjct: 228 LYLNKNKSVQHKPVYFEDTKDQIMVEVAFQY-TDGFVENLFSYVNNIHTIDGGTHETGFR 286
Query: 205 ASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVR 264
+LTR +N GKK +K+ SL GE +REGLT IISV+VP P+FEGQTKT+LGN EVR
Sbjct: 287 TALTRVINDYGKKYNILKNGSSSLLGEDIREGLTSIISVKVPEPQFEGQTKTKLGNSEVR 346
Query: 265 KVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGK 324
+VD V +YL+ +LE +P V IL KS++A +A AA++AR+L R+K+ L SS+LPGK
Sbjct: 347 GIVDAVVSDYLSTFLEENPSVARKILEKSINASRAREAARKARELTRRKTALESSTLPGK 406
Query: 325 LADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEE 384
LADCS P SE+FIVEGDSAGGSAKQGRDRR+QAILPLRGKILNVE+ + NEE
Sbjct: 407 LADCSERDPSLSELFIVEGDSAGGSAKQGRDRRYQAILPLRGKILNVEKSRLDKILSNEE 466
Query: 385 IQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGC 444
I+ LI ALG G+ G+DF E RYHKIII+TDADVDGAHIRTLLLTFFYRY + L + G
Sbjct: 467 IRALITALGTGI-GDDFNIEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRQLIENGY 525
Query: 445 IYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTL 504
Y+ PPLY+V + K+ Y Y+D EL+++ + + + S+QR+KGLGEM P QLW+TT+
Sbjct: 526 AYIAQPPLYRVRKEKKEYYVYNDKELEQLLNRVGRDRI-SLQRYKGLGEMNPEQLWDTTM 584
Query: 505 NPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
N + R + Q+ +EDA EAN +FS LMG +V+ R+ IQN A V NLD
Sbjct: 585 NFDTRTILQVQLEDAIEANQIFSMLMGDKVEPRRVFIQNNARAVRNLD 632
>gi|385808591|ref|YP_005844987.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
gi|383800639|gb|AFH47719.1| DNA gyrase subunit B [Ignavibacterium album JCM 16511]
Length = 665
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/581 (47%), Positives = 383/581 (65%), Gaps = 43/581 (7%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF +S Y VSGGLHGVG+SVVNALSE ++V V RD Y Q+Y RG P
Sbjct: 97 VVMTVLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSEWMKVEVRRDNKIYFQEYRRGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D+ GT+I F PDK +F +F+ T+A R+RELA+LN +T+ L+
Sbjct: 155 VEKVKE--IGTYKGDQTGTKITFMPDKTIFKVT-KFNFETVAERLRELAYLNKDVTMILK 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E+ E+ Y F GGL ++V++L+ ++P+H + + + +++A ++ S++Y
Sbjct: 212 DENDGTEET----YRFKGGLIDFVKYLDEQREPIHKPIYIEGEKENTPVEIAFEY-SNSY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
S+ + Y N+I TI+GGTH+ G + +LTRT N+ K+ +K+ I+L+G+ REGLT
Sbjct: 267 SENVHSYVNNINTIEGGTHLVGFRTALTRTFNNYAYKNGLIKENSKITLTGDDFREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+V P+FEGQTKT+LGN EV+ VV+ V E L+EYLE +P V I+ KSL A +A
Sbjct: 327 VVSVKVMEPQFEGQTKTKLGNSEVKSVVETIVGEKLSEYLEQNPSVAKKIIEKSLKAAEA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LVR+K+ L S LPGKLADCS T PE EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 387 REAARKARELVRRKNALDSMHLPGKLADCSITDPEHCEIYIVEGDSAGGSAKQGRDRRFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP++GKILNVE+ + +N+EIQ ++ A+G G+ GEDF RY KII++TDADV
Sbjct: 447 AILPIKGKILNVEKAKLNKILENQEIQAIVAAIGAGI-GEDFDPTKSRYGKIILMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-- 477
DG+HIRTLLLTFFYR+ K L G +Y+ PPLYKV++GK+ + +DD EL ++ F
Sbjct: 506 DGSHIRTLLLTFFYRHMKELITSGRVYIAQPPLYKVKKGKEEVFAFDDEELDQILKRFKA 565
Query: 478 ---------------------------PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRM 510
P + I R+KGLGEM P QLW TT+NPE R
Sbjct: 566 DGKAAKAKLKEIETEGEQVIETDEEGQPKGVV--ITRYKGLGEMNPEQLWSTTMNPETRT 623
Query: 511 LKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
+ Q+ +E AA A+ +F +LMG V+ R+E I+ A NLD
Sbjct: 624 ILQVNLESAAAADKIFETLMGDAVEPRREFIEKHAKYANLD 664
>gi|145578019|gb|ABP82728.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar tolworthi]
Length = 632
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|410666391|ref|YP_006918762.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
gi|409104138|gb|AFV10263.1| DNA gyrase subunit beta [Thermacetogenium phaeum DSM 12270]
Length = 642
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 272/551 (49%), Positives = 382/551 (69%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKFGG+ GY +SGGLHGVGLSVVNALS L V V RDG Y Q+Y RG+ +
Sbjct: 105 LTMLHAGGKFGGN--GYEISGGLHGVGLSVVNALSRWLLVEVRRDGRRYQQRYERGQVKS 162
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + + GT +RF PD Q+F+ +F+ I R+R+L++LN L L
Sbjct: 163 PLK----DAGAAEGTGTTVRFLPDGQIFSER-KFNREYITARVRDLSYLNKGLRFVL--- 214
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
D E++ GG+ ++V+ LN +K+ LH D + F DG+ I++ALQ+ + Y+
Sbjct: 215 -VDEVTGDRQEFYHEGGIADFVRSLNKNKEVLHQDPLYFSDKKDGVVIEVALQYHT-GYT 272
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + Y N+I T +GGTH G KA+LTR +N KKS +K+ LSGE REGLT ++
Sbjct: 273 EGIYSYVNNIHTQEGGTHEAGFKAALTRIINDYAKKSGYLKENMEKLSGEDTREGLTAVL 332
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ P+FEGQTKT+LGN EVR +V+ V E+L E+ E +P I+ K++ A +A
Sbjct: 333 SVKLKEPQFEGQTKTKLGNSEVRGIVESVVSEHLEEFFEENPGPSKLIVEKAVQAARARE 392
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+K+ L SLPGKLADC+S P E E++IVEGDSAGGSAKQGRDRRFQAI
Sbjct: 393 AARKARELTRRKTALDHISLPGKLADCTSKDPRECELYIVEGDSAGGSAKQGRDRRFQAI 452
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKI+N E+ M NEEI+++I A+G G+ +DF + RYH+III++DADVDG
Sbjct: 453 LPLRGKIINAEKARLDKMLSNEEIKSIITAVGTGIL-DDFDLKKARYHRIIIMSDADVDG 511
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFFYRY + L + G +Y+ PPLYKV++GK+++Y Y D EL+K+ ++ ++
Sbjct: 512 SHIRTLLLTFFYRYMRPLIEAGYVYIAQPPLYKVQKGKRIEYAYSDRELEKLLRNWKTDN 571
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ +IQR+KGLGEM P QLWETT++PE+R + Q+ + DA A+ +F+ LMG +V+ R+E I
Sbjct: 572 V-TIQRYKGLGEMNPEQLWETTMDPERRTMLQVTLTDAMLADEIFTILMGEKVEPRREFI 630
Query: 542 Q-NAANLVNLD 551
Q +A ++ NLD
Sbjct: 631 QAHARDVRNLD 641
>gi|145577977|gb|ABP82707.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar higo]
gi|145577979|gb|ABP82708.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar kenyae]
gi|145578009|gb|ABP82723.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar azorensis]
gi|145578021|gb|ABP82729.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar zhaodongensis]
Length = 632
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|229176169|ref|ZP_04303661.1| DNA gyrase subunit B [Bacillus cereus MM3]
gi|228607328|gb|EEK64658.1| DNA gyrase subunit B [Bacillus cereus MM3]
Length = 640
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F I ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETIVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|51891144|ref|YP_073835.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
gi|51854833|dbj|BAD38991.1| DNA gyrase B subunit [Symbiobacterium thermophilum IAM 14863]
Length = 638
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/555 (49%), Positives = 385/555 (69%), Gaps = 17/555 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ T+LHAGGKFGG + Y VSGGLHGVG +VVNALS L + V ++G Y +++ G
Sbjct: 97 VYTMLHAGGKFGGGA--YKVSGGLHGVGAAVVNALSRKLYIQVKQNGGVYEVEFANGG-- 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
TL D+K+ GT +RFWPD ++F + ++FD I R+R+ AFLN L I
Sbjct: 153 KTLYPLRRVGDTKE-HGTYVRFWPDPEIFES-VEFDSEAIVTRLRDTAFLNQGLFIQFID 210
Query: 122 EDSDPE-KNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + E + +YNE GL+ +VQ+LN ++PLH + K D ++LA+Q+ +DA
Sbjct: 211 EKAGAEYRFKYNE-----GLQTFVQYLNRSREPLHAKPIYVFKATDTQEMELAIQY-TDA 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+IRT++GGTH G+K +LTR +NS +K K +KD + +LSGE +REG+T
Sbjct: 265 YSENILSFANNIRTVEGGTHETGLKTALTRVINSYARKYKLLKDNEDNLSGEDIREGMTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV++ P+FEGQTKT+LG+ E+ V +V E L+++LE +P + I+ K+LSA +A
Sbjct: 325 ILSVKLQEPQFEGQTKTKLGSSEMETFVAAAVSEGLSDFLEENPAIAKRIVEKALSAARA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LVR+KS L ++LPGKL DC+S P ESE+F+VEGDSAGGSAK GRDRR Q
Sbjct: 385 REAARKARELVRRKSALEITALPGKLTDCTSRDPSESELFLVEGDSAGGSAKMGRDRRIQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPLRGKILNVE+ + NEEI+ LI A+G G+ G+DF RYHK+II+TDADV
Sbjct: 445 AVLPLRGKILNVEKARLDKILSNEEIRTLITAVGAGI-GDDFDISKCRYHKVIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+R+ + L + G +Y+ PPLY + +GKQV Y Y + E +V +
Sbjct: 504 DGSHIRTLLLTFFFRFMRPLIEAGYLYIASPPLYMIRKGKQVYYAYSEQEKDQVIARI-G 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
QR+KGLGEM P QLWETT++P +R+L ++ +EDAAEA +F +LMG +V+ R+E
Sbjct: 563 GVTDKPQRYKGLGEMNPEQLWETTMDPSKRILYKVTMEDAAEATALFETLMGEKVEPRRE 622
Query: 540 LIQNAANLV-NLDHL 553
IQ A+LV NLD +
Sbjct: 623 FIQRNAHLVQNLDTI 637
>gi|423583663|ref|ZP_17559774.1| DNA gyrase subunit B [Bacillus cereus VD014]
gi|423633659|ref|ZP_17609312.1| DNA gyrase subunit B [Bacillus cereus VD156]
gi|401209723|gb|EJR16482.1| DNA gyrase subunit B [Bacillus cereus VD014]
gi|401282726|gb|EJR88624.1| DNA gyrase subunit B [Bacillus cereus VD156]
Length = 642
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDNELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|145577981|gb|ABP82709.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar seoulensis]
Length = 632
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGG AKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGCAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|30018283|ref|NP_829914.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579]
gi|228955743|ref|ZP_04117738.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|365162547|ref|ZP_09358675.1| DNA gyrase subunit B [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410764|ref|ZP_17387884.1| DNA gyrase subunit B [Bacillus cereus BAG3O-2]
gi|423427579|ref|ZP_17404610.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-2]
gi|423433451|ref|ZP_17410455.1| DNA gyrase subunit B [Bacillus cereus BAG4O-1]
gi|423438891|ref|ZP_17415872.1| DNA gyrase subunit B [Bacillus cereus BAG4X12-1]
gi|423506618|ref|ZP_17483207.1| DNA gyrase subunit B [Bacillus cereus HD73]
gi|423589310|ref|ZP_17565396.1| DNA gyrase subunit B [Bacillus cereus VD045]
gi|423632808|ref|ZP_17608553.1| DNA gyrase subunit B [Bacillus cereus VD154]
gi|423644650|ref|ZP_17620267.1| DNA gyrase subunit B [Bacillus cereus VD166]
gi|423651331|ref|ZP_17626901.1| DNA gyrase subunit B [Bacillus cereus VD169]
gi|423658405|ref|ZP_17633704.1| DNA gyrase subunit B [Bacillus cereus VD200]
gi|449086675|ref|YP_007419116.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|29893823|gb|AAP07115.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579]
gi|228803971|gb|EEM50595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363618080|gb|EHL69436.1| DNA gyrase subunit B [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108918|gb|EJQ16848.1| DNA gyrase subunit B [Bacillus cereus BAG3X2-2]
gi|401109496|gb|EJQ17419.1| DNA gyrase subunit B [Bacillus cereus BAG3O-2]
gi|401111869|gb|EJQ19751.1| DNA gyrase subunit B [Bacillus cereus BAG4O-1]
gi|401116018|gb|EJQ23864.1| DNA gyrase subunit B [Bacillus cereus BAG4X12-1]
gi|401224549|gb|EJR31103.1| DNA gyrase subunit B [Bacillus cereus VD045]
gi|401259454|gb|EJR65630.1| DNA gyrase subunit B [Bacillus cereus VD154]
gi|401270282|gb|EJR76305.1| DNA gyrase subunit B [Bacillus cereus VD166]
gi|401279383|gb|EJR85312.1| DNA gyrase subunit B [Bacillus cereus VD169]
gi|401288135|gb|EJR93897.1| DNA gyrase subunit B [Bacillus cereus VD200]
gi|402447283|gb|EJV79139.1| DNA gyrase subunit B [Bacillus cereus HD73]
gi|449020432|gb|AGE75595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 642
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|288574018|ref|ZP_06392375.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569759|gb|EFC91316.1| DNA gyrase, B subunit [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 637
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/557 (48%), Positives = 380/557 (68%), Gaps = 23/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALS LE+ + R+G + Q++ +G P
Sbjct: 97 VVLTVLHAGGKFNNDT--YKVSGGLHGVGVSVVNALSSWLELDICRNGKTWGQRFEKGIP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L D+ GT + F PD ++F + F + R+RE+AFL P L I L
Sbjct: 155 VTDLEGGY----ETDKSGTTVHFMPDDEIFE-EVCFSAEILGNRLREMAFLIPGLKITLI 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
D E+ ++ + + GGL +V++LN DK L V G R D I +++ LQ+
Sbjct: 210 ---DDREEKEWT-FHYEGGLASFVEYLNRDKSSLFPKPIVVSGER---DSIFVEVGLQY- 261
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y + + +AN I T++GGTH+ G+++++TR +N +++K +KDKD +LSGE ++EG
Sbjct: 262 NDGYHERLFSFANLIHTMEGGTHVIGLRSAITRAINESARRNKVLKDKDANLSGEDLKEG 321
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LTC+ISV++ +P+FEGQTKT+LGN EV+ +VD V E L L+ P VL ++ K++ A
Sbjct: 322 LTCVISVKLGDPQFEGQTKTKLGNSEVKGIVDSIVYEGLLVALDEDPSVLKPVVDKAVKA 381
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR+LVR K+ + +LPGKLADCS PE E++IVEGDSAGGSAKQGRDR
Sbjct: 382 RQAREAAKKARELVR-KTAMTGLNLPGKLADCSGRIPENCEVYIVEGDSAGGSAKQGRDR 440
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + ++EI+ +I+ALG G+ GEDF LRYHKIII+TD
Sbjct: 441 AFQAILPLRGKILNVEKARLDRILSSKEIRTIIQALGCGI-GEDFDTTKLRYHKIIIMTD 499
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHI TLLLTFFYRY K L + G IY+ PPLY+V+ G+ +Y + D +L+ +S
Sbjct: 500 ADVDGAHISTLLLTFFYRYMKELVEGGYIYLAQPPLYRVQIGRHSEYIFSDKDLRTFMNS 559
Query: 477 FP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ +QR+KGLGEM P QLWETT++PE R++K++ ++DA A+ FS LMG +V+
Sbjct: 560 HKDTGKKIGVQRYKGLGEMNPEQLWETTMDPENRVMKRIEVDDALAADEYFSILMGDKVE 619
Query: 536 TRKELIQNAANLV-NLD 551
R+E IQ ++ V NLD
Sbjct: 620 PRREFIQAHSHEVQNLD 636
>gi|228924238|ref|ZP_04087509.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228835456|gb|EEM80826.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 640
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDNELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|229051162|ref|ZP_04194706.1| DNA gyrase subunit B [Bacillus cereus AH676]
gi|228722225|gb|EEL73626.1| DNA gyrase subunit B [Bacillus cereus AH676]
Length = 640
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|294849833|ref|ZP_06790573.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
gi|294823381|gb|EFG39810.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754]
Length = 644
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/552 (51%), Positives = 374/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L VD+ D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVDTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|145577967|gb|ABP82702.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
cereus]
Length = 632
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKVLSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|206970026|ref|ZP_03230979.1| DNA gyrase, B subunit [Bacillus cereus AH1134]
gi|218232402|ref|YP_002364860.1| DNA gyrase subunit B [Bacillus cereus B4264]
gi|228961757|ref|ZP_04123360.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229072958|ref|ZP_04206154.1| DNA gyrase subunit B [Bacillus cereus F65185]
gi|229112906|ref|ZP_04242437.1| DNA gyrase subunit B [Bacillus cereus Rock1-15]
gi|229130739|ref|ZP_04259692.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4]
gi|229153652|ref|ZP_04281828.1| DNA gyrase subunit B [Bacillus cereus m1550]
gi|229181739|ref|ZP_04309062.1| DNA gyrase subunit B [Bacillus cereus 172560W]
gi|229193744|ref|ZP_04320685.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876]
gi|296500843|ref|YP_003662543.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171]
gi|51988024|dbj|BAD44713.1| gyraseB [Bacillus cereus ATCC 14579]
gi|206734603|gb|EDZ51772.1| DNA gyrase, B subunit [Bacillus cereus AH1134]
gi|218160359|gb|ACK60351.1| DNA gyrase, B subunit [Bacillus cereus B4264]
gi|228589769|gb|EEK47647.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876]
gi|228601772|gb|EEK59270.1| DNA gyrase subunit B [Bacillus cereus 172560W]
gi|228629838|gb|EEK86491.1| DNA gyrase subunit B [Bacillus cereus m1550]
gi|228652756|gb|EEL08641.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4]
gi|228670585|gb|EEL25898.1| DNA gyrase subunit B [Bacillus cereus Rock1-15]
gi|228710204|gb|EEL62182.1| DNA gyrase subunit B [Bacillus cereus F65185]
gi|228797951|gb|EEM44961.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|296321895|gb|ADH04823.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171]
Length = 640
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|299143458|ref|ZP_07036538.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517943|gb|EFI41682.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 639
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/555 (48%), Positives = 388/555 (69%), Gaps = 18/555 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF ++ Y VSGGLHGVG+SVVNALS L V V R+G Y QK+SRG
Sbjct: 97 VLTILHAGGKF--NNGAYKVSGGLHGVGVSVVNALSTELIVNVKRNGNIYEQKFSRGIAK 154
Query: 62 TTLTCHVLPVDS--KDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
T L + V+ K+ GT+I F PD ++F T ++F+ ++ R RE+AFLN + I
Sbjct: 155 TQL----IEVEKLKKEETGTKIFFRPDPEIFDT-VEFEFEILSKRFREMAFLNKGIKIQF 209
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSD 178
D + Y + GG++ +V+++N K +H + + ++ + +++ALQ+ +D
Sbjct: 210 ----IDHRIGKDETYHYEGGIKSFVEYINRKKTAIHKEIIYIDEIRENTAVEIALQY-TD 264
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++ +L +AN+I T +GG+H+ G +++LTR +N G+K +K+K+ +LSGE VREGLT
Sbjct: 265 SYTENILTFANNINTEEGGSHLSGFRSALTRCINDYGRKYNIIKEKEENLSGEDVREGLT 324
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV++PNP+FEGQTK +LGN E R +VD SV E L+ +LE +P V +IL KSLSA +
Sbjct: 325 GVISVKLPNPQFEGQTKAKLGNSETRGIVDSSVSENLSSFLEENPKVAKTILEKSLSARR 384
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++ARDL R+K++L S +LPGKLADC ++ E +EIF+VEGDSAGGSAK RD F
Sbjct: 385 AREAARKARDLTRKKNILESMTLPGKLADCQNSDNETTEIFLVEGDSAGGSAKDARDSVF 444
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKI+NVE+ + ++EI+ +I A G G+ G +F + LRY+KIII+TDAD
Sbjct: 445 QAILPLRGKIMNVEKARLDKILNSDEIKAMITAFGTGI-GSEFSIDNLRYNKIIIMTDAD 503
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSF 477
VDGAHI TLLLTFF+RY + L +EG +YV PPL+ + +G K ++YCYDD EL++ +
Sbjct: 504 VDGAHIMTLLLTFFFRYMRPLIEEGHVYVAQPPLFGILKGTKALRYCYDDRELQRALNEL 563
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + I+R+KGLGEM P LWETT+NP+ R+L ++ I+DA EA+ FS LMG+ V+ R
Sbjct: 564 GRDKKFDIKRYKGLGEMNPEDLWETTMNPDHRILLKVEIKDAIEADETFSMLMGSEVEPR 623
Query: 538 KELIQ-NAANLVNLD 551
++ IQ NA + N+D
Sbjct: 624 RDFIQENALFVENID 638
>gi|145577987|gb|ABP82712.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar wratislaviensis]
Length = 632
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/554 (50%), Positives = 378/554 (68%), Gaps = 17/554 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG PV
Sbjct: 92 IMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPV 149
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIAL 119
L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 150 ADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIED 205
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++
Sbjct: 206 KRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NE 259
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 260 GYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLT 319
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A +
Sbjct: 320 AIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAAR 379
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR F
Sbjct: 380 ARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHF 439
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDAD
Sbjct: 440 QAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDAD 498
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P
Sbjct: 499 VDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELP 558
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM P QLWET ++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 559 AQPKPGIQRYKGLGEMNPTQLWETAMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRR 618
Query: 539 ELIQ-NAANLVNLD 551
IQ NA + NLD
Sbjct: 619 NFIQENAKYVKNLD 632
>gi|145578001|gb|ABP82719.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar shandongiensis]
Length = 632
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P S I+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISGIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLGKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|375311491|ref|ZP_09776746.1| DNA gyrase subunit b [Paenibacillus sp. Aloe-11]
gi|375076671|gb|EHS54924.1| DNA gyrase subunit b [Paenibacillus sp. Aloe-11]
Length = 634
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/556 (50%), Positives = 381/556 (68%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 93 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKVIVHVKRDGHVYEQEYHRGVP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D GT+ F+PD+Q+FT +D++T+ RIRELAFLN + I+L
Sbjct: 151 ----QYDVRVIGDTDETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNKGIAISL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D + + + GG+ EYVQ+LN ++ LH+ V G R D I +++ALQ+
Sbjct: 206 ---TDERTGASDTFHYEGGISEYVQFLNQQREALHEQPIYVEGSR---DMIQVEVALQY- 258
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+G+ VREG
Sbjct: 259 NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDSNANLTGDDVREG 318
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V ++ KSL A
Sbjct: 319 LTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRVVDKSLQA 378
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 379 ARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 438
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYHK+II+TD
Sbjct: 439 HFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDISKARYHKVIIMTD 497
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + D G +Y+ PPL+KVER K ++Y +AE ++
Sbjct: 498 ADVDGAHIRTLLLTFFYRYMRKILDAGYVYIAQPPLFKVERNKVIRYANSEAERDEIIRE 557
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y++QR+KGLGEM QLWETT++PE R + Q+ I DA A+ +F++LMG V+
Sbjct: 558 FGENAKYNVQRYKGLGEMNAAQLWETTMDPESRTMLQVTINDAMLADTLFNTLMGDNVEP 617
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 618 RRDFIQEHAKYVKNLD 633
>gi|190710611|gb|ACE95136.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKA----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|310639477|ref|YP_003944235.1| DNA gyrase subunit b [Paenibacillus polymyxa SC2]
gi|386038696|ref|YP_005957650.1| DNA gyrase subunit B [Paenibacillus polymyxa M1]
gi|309244427|gb|ADO53994.1| DNA gyrase subunit B [Paenibacillus polymyxa SC2]
gi|343094734|emb|CCC82943.1| DNA gyrase subunit B [Paenibacillus polymyxa M1]
Length = 636
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/556 (50%), Positives = 381/556 (68%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKMIVHVKRDGHVYEQEYHRGAP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + GT+ F+PD+Q+FT +D++T+ RIRELAFLN + I+L
Sbjct: 153 ----QYDVRVIGDTEETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNKGIAISL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D + + + GG+ EYVQ+LN ++ LH+ V G R D I +++ALQ+
Sbjct: 208 ---TDERTGASDTFHYEGGISEYVQFLNQKREALHEQPIYVEGSR---DMIQVEVALQY- 260
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+G+ VREG
Sbjct: 261 NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGLIKDNNANLTGDDVREG 320
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V ++ KSL A
Sbjct: 321 LTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRVVDKSLQA 380
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 381 ARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 440
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYHK+II+TD
Sbjct: 441 HFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDITKARYHKVIIMTD 499
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + D G IY+ PPL+KVER K V+Y +AE ++
Sbjct: 500 ADVDGAHIRTLLLTFFYRYMRKIIDAGYIYIAQPPLFKVERNKVVRYANSEAERDEIIKE 559
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y++QR+KGLGEM QLWETT++PE R + Q+ + DA A+ +F++LMG V+
Sbjct: 560 FGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTVSDAMLADTLFNTLMGDNVEP 619
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 620 RRDFIQEHAKYVKNLD 635
>gi|320527132|ref|ZP_08028319.1| DNA gyrase, B subunit [Solobacterium moorei F0204]
gi|320132460|gb|EFW25003.1| DNA gyrase, B subunit [Solobacterium moorei F0204]
Length = 664
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/557 (48%), Positives = 368/557 (66%), Gaps = 19/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG + Y VSGGLHGVG SVVNALS LEVTV+ DG EY+ ++ G P
Sbjct: 119 IFTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSSWLEVTVFHDGKEYYIRFENGGHP 176
Query: 61 VTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 116
V TL TC D+ G+ +RF D +FT + ++H+ + R+R+LAFLN +
Sbjct: 177 VGTLIEKGTC------PADKHGSTVRFKADPTIFTETVAYEHDILRDRLRQLAFLNKSIC 230
Query: 117 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQW 175
+ + E ++ + F GGL++Y ++LN ++ + H+++ I +++A Q+
Sbjct: 231 LKFNDLREEDEAKRHYVFKFDGGLKQYTEFLNRNRDVVNHEIIYSEGYESNIQVEVACQY 290
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D Y+ + + N+I T +GGTH EG + +L R +N + + +K+KD +L+ + RE
Sbjct: 291 -NDGYNPNIYTFCNNINTAEGGTHEEGFRLALNRVINKYARDTGFLKEKDDNLTTDDCRE 349
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+ P+P++EGQTKT+LGN EVRK+V L YL +PD IL K
Sbjct: 350 GLTAVISVKHPDPQYEGQTKTKLGNSEVRKIVSDIFGTQLERYLMENPDEAKVILEKVAL 409
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +A +AAK+AR+L R+KS L S LPGKLADCSS EI+IVEG SAGGSAKQGRD
Sbjct: 410 ASQARMAAKKARELTRRKSALEVSPLPGKLADCSSKDASICEIYIVEGQSAGGSAKQGRD 469
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
FQAILPLRGKILNVE+ ++ +Y+N EI+++I A G GV E E LRYHKI+I+T
Sbjct: 470 SHFQAILPLRGKILNVEKARQSRIYENAEIRSMITAFGCGVSDE-IDLEKLRYHKIVIMT 528
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFFYRY + L ++G IY+ PPLYKV++G+ V+Y Y D +L++VK
Sbjct: 529 DADVDGAHIRTLLLTFFYRYLRPLLEQGYIYIAQPPLYKVQKGQTVRYAYTDNQLEEVKR 588
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
SIQR+KGLGEM P QLWETT++P+ R L ++ + DA A+ F+ LMG V+
Sbjct: 589 ELGDR--LSIQRYKGLGEMNPEQLWETTMDPKNRTLIRVAVGDAEAADYNFTMLMGEEVE 646
Query: 536 TRKELI-QNAANLVNLD 551
RK I +NA NLD
Sbjct: 647 PRKNFIVENAHFAENLD 663
>gi|126697571|ref|YP_001086468.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|254977347|ref|ZP_05273819.1| DNA gyrase subunit B [Clostridium difficile QCD-66c26]
gi|255094677|ref|ZP_05324155.1| DNA gyrase subunit B [Clostridium difficile CIP 107932]
gi|255102904|ref|ZP_05331881.1| DNA gyrase subunit B [Clostridium difficile QCD-63q42]
gi|255308724|ref|ZP_05352895.1| DNA gyrase subunit B [Clostridium difficile ATCC 43255]
gi|255316431|ref|ZP_05358014.1| DNA gyrase subunit B [Clostridium difficile QCD-76w55]
gi|255519091|ref|ZP_05386767.1| DNA gyrase subunit B [Clostridium difficile QCD-97b34]
gi|255652274|ref|ZP_05399176.1| DNA gyrase subunit B [Clostridium difficile QCD-37x79]
gi|260681774|ref|YP_003213059.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|306521988|ref|ZP_07408335.1| DNA gyrase, B subunit [Clostridium difficile QCD-32g58]
gi|384359324|ref|YP_006197176.1| DNA gyrase subunit B [Clostridium difficile BI1]
gi|423088743|ref|ZP_17077117.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
gi|115249008|emb|CAJ66819.1| DNA gyrase subunit B [Clostridium difficile 630]
gi|260207937|emb|CBA60049.1| DNA gyrase subunit B [Clostridium difficile CD196]
gi|357559149|gb|EHJ40609.1| DNA gyrase, B subunit [Clostridium difficile 70-100-2010]
Length = 633
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/529 (50%), Positives = 360/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F
Sbjct: 114 LHGVGVSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESQDKGTMIQFM 169
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD+ +F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+
Sbjct: 170 PDETIFD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYI 226
Query: 145 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN + +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G
Sbjct: 227 KYLNKSRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGF 285
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA+LT+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +
Sbjct: 286 KAALTKTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFM 345
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD + L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPG
Sbjct: 346 RGIVDSVTVDELGSFLEENPSTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPG 405
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++
Sbjct: 406 KLADCAEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSD 465
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+N+I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFF+RY + L DEG
Sbjct: 466 EIKNMITAYGCGI-GEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEG 524
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y PPLYKV + K+ Y Y D EL + N + +QR+KGLGEM QLWETT
Sbjct: 525 YVYAAQPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGV-ELQRYKGLGEMNAEQLWETT 583
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R L Q+ +EDAA A+ VFS LMG +V RKE I+ A V NLD
Sbjct: 584 MNPETRTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLD 632
>gi|190710567|gb|ACE95114.1| gyrase subunit B [Bacillus thuringiensis serovar toumanoffi]
Length = 627
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSETFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|118475783|ref|YP_892934.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam]
gi|118415008|gb|ABK83427.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam]
Length = 645
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 103 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 161 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 216
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 217 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 271 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 331 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 391 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 451 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 509
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 510 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 569
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 570 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 629
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 630 RNFIQENAKYVKNLD 644
>gi|167043616|gb|ABZ08310.1| putative DNA gyrase B, partial [uncultured marine microorganism
HF4000_APKG2M17]
Length = 655
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/556 (48%), Positives = 378/556 (67%), Gaps = 12/556 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+S VNALSE LE ++WRDG + Q + G P
Sbjct: 106 VVMTTLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSEKLEASIWRDGALWKQTFEYGDP 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V + + GT +RFWPD +F T +F + +A R+RE+A+LN + I++
Sbjct: 164 VGAV-AKVRDMKDGESTGTLVRFWPDGGIFQTT-EFRFDRLADRLREMAYLNRHVYISI- 220
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDA 179
ED + +EY F GG+ E+V++L+ + P+HD + D D + +++A+++ S
Sbjct: 221 -EDLREAEGLRDEYHFEGGIIEFVEYLDEARTPIHDETIYIADEDAEVPVEMAMRYNS-G 278
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L + N+I T +GGTH+ G + +LTRTL S K+ +K+ + LSG+ REG+T
Sbjct: 279 YTENVLSFVNNINTHEGGTHVSGFRRALTRTLKSYADKNNLLKNVKVDLSGDDFREGITV 338
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++V P+FEGQTKT+LGN EV+ V+ V L E+L+ HP I+ K + A +A
Sbjct: 339 ILSIKVAEPQFEGQTKTKLGNSEVQGAVESLVFLKLGEWLDDHPKESKRIVEKVIIAAEA 398
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV++K+ S LPGKLADCSS EE EI++VEGDSAGGSAKQ RDR FQ
Sbjct: 399 RAAARKARELVQRKNAFSSGGLPGKLADCSSKNAEECEIYLVEGDSAGGSAKQARDRHFQ 458
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRAL--GLGVKGEDFKKEALRYHKIIILTDA 417
AILPLRGKILNVE+ + NEEI+N++ AL GLG +DF E LRYHKII++TDA
Sbjct: 459 AILPLRGKILNVEKARLDRILANEEIRNIVTALGTGLGAGEDDFDPEKLRYHKIIVMTDA 518
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTF YR+ L + G IY+ PPLYK ++GKQ +YC+ D +LK+V
Sbjct: 519 DVDGAHIRTLLLTFLYRHMHALVEAGYIYIAQPPLYKAKKGKQEEYCWTDKQLKEVIERI 578
Query: 478 PSNA--LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
++ +IQR+KGLGEM P QLW+TT+NPE R+L+++ I+DAA A+ +FS+LMG V+
Sbjct: 579 GGDSPEKVTIQRYKGLGEMNPDQLWDTTMNPETRLLQRITIDDAAAADRIFSTLMGDAVE 638
Query: 536 TRKELIQNAANLVNLD 551
R++ I+ A +D
Sbjct: 639 PRRKFIERNAKYATID 654
>gi|152973859|ref|YP_001373376.1| DNA gyrase subunit B [Bacillus cytotoxicus NVH 391-98]
gi|152022611|gb|ABS20381.1| DNA gyrase, B subunit [Bacillus cytotoxicus NVH 391-98]
Length = 640
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/555 (49%), Positives = 380/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + DR GT RF PD ++F +D + +A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGETDRTGTVTRFKPDPEIFKETTVYDFDILATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCS 177
++E+ Q E+ + GG++ YV+ LN K+P+H+ + + DGI ++++LQ+ +
Sbjct: 212 DKRENK-----QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGAKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPSISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDISKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G +Y+ PPL+KV++GK++QY Y++ EL+++ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYVYIAQPPLFKVQQGKKIQYAYNEKELERILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ SIQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPSIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|190710589|gb|ACE95125.1| gyrase subunit B [Bacillus thuringiensis serovar darmstadiensis]
Length = 627
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYANHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|190710551|gb|ACE95106.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
gi|190710565|gb|ACE95113.1| gyrase subunit B [Bacillus thuringiensis serovar sumiyoshiensis]
gi|190710591|gb|ACE95126.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
Length = 627
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|406671602|ref|ZP_11078841.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
gi|405580852|gb|EKB54911.1| DNA gyrase subunit B [Facklamia hominis CCUG 36813]
Length = 639
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/552 (48%), Positives = 365/552 (66%), Gaps = 13/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFGG S Y VSGGLHGVG SVVNALS L V V R G Y ++ RG
Sbjct: 98 VYTVLHAGGKFGGGS--YKVSGGLHGVGASVVNALSSQLSVEVSRSGKVYRIEFERG--- 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+T + + + GTR+ F PD +FT ++ N + RIRELAFLN L I L
Sbjct: 153 -NITSELKVIGDHEETGTRVNFVPDPTIFTETTEYRFNILNERIRELAFLNKNLRITLVD 211
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
+ D EK YF+ GG++ YV +LN DK+ L + + +++GIT+++ALQ+ + AY
Sbjct: 212 KREDREKEV--SYFYEGGIKSYVSYLNEDKEVLFSEPIYLEGELEGITVEIALQYTT-AY 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +AN+I T +GGTH G K SLTR +N +++ +K+ + +L+GE REGL I
Sbjct: 269 ETIINSFANNIHTHEGGTHESGFKTSLTRVINDYARRANLIKESESNLTGEDTREGLVAI 328
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN EVR V D+ + +L +P + +I+ K + A KA
Sbjct: 329 VSIKHPDPQFEGQTKTKLGNSEVRTVTDRLFSSHFETFLLENPKIARTIVDKGILASKAR 388
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRAR++ R+KS L ++LPGKLADCSS E+ E+FIVEGDSAGGSAKQGR R +QA
Sbjct: 389 HAAKRAREITRKKSGLEIANLPGKLADCSSKDAEKCELFIVEGDSAGGSAKQGRSRLYQA 448
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + N EI++L A+G G G DF E RYHK+II+TDADVD
Sbjct: 449 ILPIRGKILNVEKASMDRILNNMEIRSLFTAMGTGF-GADFDVEKARYHKLIIMTDADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLT +RY + L + G +Y+ +PPLYK++ GK+ Y D +L + + P +
Sbjct: 508 GAHIRTLLLTLVFRYMRPLLEAGYVYIALPPLYKLKVGKKEFYLDTDEQLDQWQKENP-D 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+S+QR+KGLGEM QLWETT+NP R ++++ ++DA EAN V + LMG V R+E
Sbjct: 567 VRFSLQRYKGLGEMNAEQLWETTMNPANRRMQKVKMKDADEANRVMNMLMGEEVQPRREF 626
Query: 541 I-QNAANLVNLD 551
I QNA + NLD
Sbjct: 627 IEQNAVYVRNLD 638
>gi|325299173|ref|YP_004259090.1| DNA gyrase subunit B [Bacteroides salanitronis DSM 18170]
gi|324318726|gb|ADY36617.1| DNA gyrase, B subunit [Bacteroides salanitronis DSM 18170]
Length = 654
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/562 (48%), Positives = 367/562 (65%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y+ GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMITNVFRNGKIYQQEYACGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V + D GTR FWPD +FT ++ +N + R+RELA+LN +TI L
Sbjct: 158 LYP----VKEVGTTDITGTRQTFWPDASIFTVT-EYKYNILQARMRELAYLNKGITITLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E Y + F G++E+V++LN+ PL DV+ + G+ I+ A+ + +
Sbjct: 213 DKREKEEDGSYKQEVFHSEEGVKEFVRFLNSTNTPLIDDVIYLNTEKQGVPIECAIMY-N 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ + + Y N+I TI+GGTH G + +LTR L + SK ++ + +SGE REGL
Sbjct: 272 TGFRENLHSYVNNINTIEGGTHEAGFRTALTRVLKKYAEDSKALEKAKVEISGEDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
+ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+ K + A
Sbjct: 332 IAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKLIVDKVVLAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A +AA++AR+ V++KS + LPGKLADCSS TPEE E+F+VEGDSAGGSAKQGR R+
Sbjct: 392 TARIAARKARESVQRKSPMGGGGLPGKLADCSSRTPEECELFLVEGDSAGGSAKQGRSRQ 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GV-KGEDFKK---EALRYHKI 411
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED KK + LRY+K+
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGVDDSEDSKKANIDKLRYNKV 511
Query: 412 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 471
II+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YCY D E +
Sbjct: 512 IIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIANPPLYKCSKGKVSEYCYTDEERQ 571
Query: 472 KVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+ I QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA+ +FS L
Sbjct: 572 AFMQKYGDGTETGIHTQRYKGLGEMNPEQLWETTMNPETRILKQVSIENAAEADYIFSML 631
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A N+D
Sbjct: 632 MGDDVAPRREFIEKHATYANID 653
>gi|423082996|ref|ZP_17071578.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
gi|423086520|ref|ZP_17074925.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357546724|gb|EHJ28633.1| DNA gyrase, B subunit [Clostridium difficile 050-P50-2011]
gi|357547075|gb|EHJ28974.1| DNA gyrase, B subunit [Clostridium difficile 002-P50-2011]
Length = 633
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/529 (50%), Positives = 360/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F
Sbjct: 114 LHGVGVSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESQDKGTMIQFM 169
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD+ +F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+
Sbjct: 170 PDETIFD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYI 226
Query: 145 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN + +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G
Sbjct: 227 KYLNKSRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGF 285
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA+LT+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +
Sbjct: 286 KAALTKTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFM 345
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD + L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPG
Sbjct: 346 RGIVDSVTVDELGSFLEENPATARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPG 405
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++
Sbjct: 406 KLADCAEKDPSKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSD 465
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+N+I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFF+RY + L DEG
Sbjct: 466 EIKNMITAYGCGI-GEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEG 524
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y PPLYKV + K+ Y Y D EL + N + +QR+KGLGEM QLWETT
Sbjct: 525 YVYAAQPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGV-ELQRYKGLGEMNAEQLWETT 583
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R L Q+ +EDAA A+ VFS LMG +V RKE I+ A V NLD
Sbjct: 584 MNPETRTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLD 632
>gi|257871393|ref|ZP_05651046.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
gi|257805557|gb|EEV34379.1| DNA gyrase B subunit [Enterococcus gallinarum EG2]
Length = 649
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/533 (48%), Positives = 359/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V+++G Y+Q+Y RG V L + DR GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVKVFKEGKVYYQEYHRGAVVEDLKV----IGETDRHGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT F+ + +A R+RELAFLN L I++ ED E EY + GG++ YV
Sbjct: 180 PDPEIFTETTVFNFDKLATRVRELAFLNRGLKISI--EDKREEHPVLKEYHYDGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K + + + + GIT++++LQ+ +D+Y + +L +AN+I T +GGTH G
Sbjct: 238 EHLNASKTVIFPEPIYLEGEQQGITVEVSLQY-TDSYHNNLLSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTALTRVINDYARKSKLMKENDENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ T++L +P V ++ K L A KA AAKRAR++ R+K L S+LPG
Sbjct: 357 RTVTDRLFSEHFTKFLMENPAVGRQVVEKGLLASKARQAAKRAREMTRRKGALEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + +LK S P+ S+QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNIHYIQPGKNAEQDLKNTIESLPATPKPSVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE RM+ ++ ++DA EA+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPENRMMLRVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|145577965|gb|ABP82701.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGETDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|169823702|ref|YP_001691313.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
gi|167830507|dbj|BAG07423.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
Length = 638
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/557 (49%), Positives = 386/557 (69%), Gaps = 21/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q++ +GK V
Sbjct: 95 VLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQRFEKGKTV 152
Query: 62 TTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T LT V R GT I F PD +F T + FD N +A R RE+AFLN + I
Sbjct: 153 TGLTV----VKENVRGTGTTIEFMPDDTIFET-LNFDKNVLAKRFREMAFLNKGVKI--- 204
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
E SD E++ Y E F + GG++ +V+++N KKPL H+V+ + D +++A+Q+ ++
Sbjct: 205 -EFSD-ERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQY-TE 261
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG+ VREG+T
Sbjct: 262 SYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGIT 321
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+ K+L++ K
Sbjct: 322 AVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKALASQK 381
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSAK GRD +F
Sbjct: 382 ARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKGGRDNKF 441
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY KI+I+TDAD
Sbjct: 442 QAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGKIVIMTDAD 500
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSF 477
VDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + EL++ +
Sbjct: 501 VDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQELEEALEKY 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVD 535
+ +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F LMG V+
Sbjct: 561 GERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFDVLMGDNVE 620
Query: 536 TRKELI-QNAANLVNLD 551
R+E I QNA N+D
Sbjct: 621 PRREFIEQNAVYAQNID 637
>gi|423355976|ref|ZP_17333600.1| DNA gyrase subunit B [Bacillus cereus IS075]
gi|423374937|ref|ZP_17352274.1| DNA gyrase subunit B [Bacillus cereus AND1407]
gi|423554056|ref|ZP_17530382.1| DNA gyrase subunit B [Bacillus cereus ISP3191]
gi|423571385|ref|ZP_17547628.1| DNA gyrase subunit B [Bacillus cereus MSX-A12]
gi|401080923|gb|EJP89205.1| DNA gyrase subunit B [Bacillus cereus IS075]
gi|401093153|gb|EJQ01268.1| DNA gyrase subunit B [Bacillus cereus AND1407]
gi|401181489|gb|EJQ88637.1| DNA gyrase subunit B [Bacillus cereus ISP3191]
gi|401201206|gb|EJR08082.1| DNA gyrase subunit B [Bacillus cereus MSX-A12]
Length = 642
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|227498783|ref|ZP_03928923.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|352683418|ref|YP_004895401.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
gi|226904235|gb|EEH90153.1| type IIA topoisomerase [Acidaminococcus sp. D21]
gi|350278071|gb|AEQ21261.1| type IIA topoisomerase [Acidaminococcus intestini RyC-MR95]
Length = 648
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/557 (49%), Positives = 381/557 (68%), Gaps = 21/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKFG GY VSGGLHGVG+S VNALS +EV V +DG Y ++S+GK
Sbjct: 106 VVMTILHAGGKFG--DGGYKVSGGLHGVGVSCVNALSRRMEVEVKKDGKIYGIEFSKGKT 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L D+KD GT + FWPD +FT + + + T+ RIRELAFLN + I L+
Sbjct: 164 VRPLYVKG-ECDAKD-TGTSVHFWPDDTIFTETV-YSYETLKHRIRELAFLNKGVKIELK 220
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+ S ++ + + GG+ +V+++N K+ + + V G R+D +++A+Q+
Sbjct: 221 DDRSGADEI----FHYEGGIISFVEYINKGKEAIFNTPIYVEGERQDT---IVEVAMQY- 272
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAY++ + + N+I T +GGTH+ G+K +LTR++N +K+ +KD + +LSG+ VREG
Sbjct: 273 TDAYTENIYTFVNNINTEEGGTHLAGLKQALTRSINDYARKNGLLKDSEENLSGDDVREG 332
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LTC++S++V P+FEGQTKT+LGN EVR +VD V + L EY E + I+ K++ +
Sbjct: 333 LTCVLSLKVREPQFEGQTKTKLGNSEVRGIVDNMVSDALNEYFEENAPTAKKIVEKAILS 392
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++ARDL R+KS L SSLPGKLADCSS EE+EI+IVEGDSAGGSAKQGRDR
Sbjct: 393 SRARAAARKARDLTRRKSALEVSSLPGKLADCSSKNAEETEIYIVEGDSAGGSAKQGRDR 452
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ M N EI+++I A G G+ G++F +RY KIII+TD
Sbjct: 453 AFQAILPLRGKILNVEKARLDKMLNNNEIRSMITAFGCGI-GDEFDLSKIRYGKIIIMTD 511
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKS 475
ADVDGAHIRTLLLTFFYRY + L G +++ PPLY + GK Y Y D EL KK+
Sbjct: 512 ADVDGAHIRTLLLTFFYRYMQPLIRNGNVFIAQPPLYLIRTGKNHTYAYSDDELQKKLDE 571
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
N Y +QR+KGLGEM P QLWETT++P +R + Q+ +EDAA A+ VFS LMG +V+
Sbjct: 572 VGRQNNPY-VQRYKGLGEMNPEQLWETTMDPSKRTVLQVHLEDAASADSVFSVLMGDKVE 630
Query: 536 TRKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 631 PRRQFIEENAGKVTNLD 647
>gi|145578013|gb|ABP82725.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar graciosensis]
Length = 632
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGETDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|390454457|ref|ZP_10239985.1| DNA gyrase subunit B [Paenibacillus peoriae KCTC 3763]
Length = 639
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/556 (49%), Positives = 380/556 (68%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 98 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKMVVHVKRDGHVYEQEYHRGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D GT+ F+PD+Q+FT +D++T+ RIRELAFLN + I+L
Sbjct: 156 ----QYDVRVIGDTDETGTQTTFYPDEQIFTETTVYDYDTLQTRIRELAFLNKGIAISL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D + + + GG+ EYVQ+LN ++ LH+ V G R D I +++ALQ+
Sbjct: 211 ---TDERTGASDTFHYEGGISEYVQFLNQQREALHEQPIYVEGSR---DMIQVEVALQY- 263
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +L+G+ VREG
Sbjct: 264 NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGMIKDSNANLTGDDVREG 323
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V ++ KSL A
Sbjct: 324 LTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRVVDKSLQA 383
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 384 ARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 443
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYHK+II+TD
Sbjct: 444 HFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDISKARYHKVIIMTD 502
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + D G +Y+ PPL+KVER K ++Y + E ++
Sbjct: 503 ADVDGAHIRTLLLTFFYRYMRKILDAGYVYIAQPPLFKVERNKVIRYANSEVERDEIIRE 562
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y++QR+KGLGEM QLWETT++PE R + Q+ I DA A+ +F++LMG V+
Sbjct: 563 FGENAKYNVQRYKGLGEMNAAQLWETTMDPESRTMLQVTINDAMLADTLFNTLMGDNVEP 622
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 623 RRDFIQEHAKYVKNLD 638
>gi|380693260|ref|ZP_09858119.1| DNA gyrase subunit B [Bacteroides faecis MAJ27]
Length = 653
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/560 (47%), Positives = 378/560 (67%), Gaps = 20/560 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
+ V V D GTR +FWPD +FT + +D+ +A R+RELA+LN L I+L R
Sbjct: 160 S----VKEVGVSDITGTRQQFWPDDTIFTETV-YDYKILAARLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
+ ++ + + +E F++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEEDGSFKSEVFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEIAIMYNT- 273
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLT 333
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A
Sbjct: 334 AVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAAT 393
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R F
Sbjct: 394 ARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMF 453
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIIL 414
QAILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA LRYHKIII+
Sbjct: 454 QAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEKLRYHKIIIM 513
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 TDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFI 573
Query: 475 SSFP---SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 DTYGGGLENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMG 632
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 EDVGPRREFIEENATYANID 652
>gi|427406668|ref|ZP_18896873.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
gi|425708098|gb|EKU71139.1| DNA gyrase, B subunit [Selenomonas sp. F0473]
Length = 684
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 375/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGRIYEISFARGNT 200
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 201 TEKLR----EVGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNHGITITLT 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + +++ + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 DERGEEPRSE--TFHFEGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKDKDGNLSGEDVREGLTC 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPTERTMLRVAAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|301051746|ref|YP_003789957.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis
str. CI]
gi|300373915|gb|ADK02819.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis
str. CI]
Length = 640
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKI----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|145578017|gb|ABP82727.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar tohokuensis]
Length = 632
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T++ R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLSTRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQA LPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQATLPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|319936688|ref|ZP_08011101.1| DNA gyrase subunit B [Coprobacillus sp. 29_1]
gi|319808245|gb|EFW04810.1| DNA gyrase subunit B [Coprobacillus sp. 29_1]
Length = 640
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 272/552 (49%), Positives = 372/552 (67%), Gaps = 12/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK-P 60
I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V R+G Y+Q++ +G P
Sbjct: 98 ILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVHVHREGHIYYQRFEKGGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT + F D +F +D++T+ RIRELAFLN L + L
Sbjct: 156 VGDLKI----IGDCDDTGTIVSFKADPLIFNETTIYDYDTLNQRIRELAFLNKGLKLILE 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKD-VDGITIDLALQWCSDA 179
++P K NEY + GG++EYV +LN +K +H+ + + +D +D I +++ +Q+ +D
Sbjct: 212 DHRNEPYKK--NEYHYEGGIKEYVAYLNRNKTAIHEEIIYVEDEIDDIKVEVGMQY-NDG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T +GGTH EG + +LTR +N+ K + +K D SL+G+ REGLT
Sbjct: 269 YQPNIYSFCNNINTHEGGTHEEGFRLALTRVINNYAKNNNFLKKDDESLNGDDCREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+ + E L ++L +PD I++K++ A A
Sbjct: 329 IISVKHPDPQYEGQTKTKLGNSEVRKIASNIISEALDKFLLENPDTASIIMNKAIVASHA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAKRAR++ R+K+ L S +LPGKLADCSS P E E+FIVEGDSAGGSAK GRDRR Q
Sbjct: 389 RMAAKRAREMTRRKTALDSIALPGKLADCSSKDPSECEVFIVEGDSAGGSAKMGRDRRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ G++F LRYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILGNAEIRSMITAFGTGI-GDEFDISKLRYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIR L+LTF YR+ K L +EG +Y PPLY ++ GK+ Y Y D EL+K+K
Sbjct: 508 DGGHIRILMLTFLYRFLKPLIEEGFVYAAQPPLYLLKHGKEEHYLYSDYELEKLKEDLGP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
NA Y+IQR+KGLGEM QLWETT++PE R+L Q+ ++DA +A+ +F +LMG +V+ R+E
Sbjct: 568 NAKYNIQRYKGLGEMNAEQLWETTMDPENRLLWQIDLDDAMQADAMFDTLMGEKVEPRRE 627
Query: 540 LIQNAANLVNLD 551
IQ A LD
Sbjct: 628 FIQEHAQEAELD 639
>gi|30260200|ref|NP_842577.1| DNA gyrase subunit B [Bacillus anthracis str. Ames]
gi|47525259|ref|YP_016608.1| DNA gyrase subunit B [Bacillus anthracis str. 'Ames Ancestor']
gi|49183044|ref|YP_026296.1| DNA gyrase subunit B [Bacillus anthracis str. Sterne]
gi|49476686|ref|YP_034365.1| DNA gyrase subunit B [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65317473|ref|ZP_00390432.1| COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase
IV), B subunit [Bacillus anthracis str. A2012]
gi|165873014|ref|ZP_02217635.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488]
gi|167635023|ref|ZP_02393340.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442]
gi|167641730|ref|ZP_02399973.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193]
gi|170689461|ref|ZP_02880651.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465]
gi|170707498|ref|ZP_02897951.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389]
gi|177655278|ref|ZP_02936832.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174]
gi|190569295|ref|ZP_03022189.1| DNA gyrase, B subunit [Bacillus anthracis str. Tsiankovskii-I]
gi|196036134|ref|ZP_03103534.1| DNA gyrase, B subunit [Bacillus cereus W]
gi|196041949|ref|ZP_03109236.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99]
gi|196045551|ref|ZP_03112782.1| DNA gyrase, B subunit [Bacillus cereus 03BB108]
gi|206975909|ref|ZP_03236820.1| DNA gyrase, B subunit [Bacillus cereus H3081.97]
gi|217957586|ref|YP_002336128.1| DNA gyrase subunit B [Bacillus cereus AH187]
gi|218901211|ref|YP_002449045.1| DNA gyrase subunit B [Bacillus cereus AH820]
gi|227812683|ref|YP_002812692.1| DNA gyrase subunit B [Bacillus anthracis str. CDC 684]
gi|228918105|ref|ZP_04081633.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930499|ref|ZP_04093499.1| DNA gyrase subunit B [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931511|ref|ZP_04094421.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228949215|ref|ZP_04111483.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228988722|ref|ZP_04148807.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229124996|ref|ZP_04254170.1| DNA gyrase subunit B [Bacillus cereus 95/8201]
gi|229142242|ref|ZP_04270766.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26]
gi|229187722|ref|ZP_04314858.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1]
gi|229603398|ref|YP_002864662.1| DNA gyrase subunit B [Bacillus anthracis str. A0248]
gi|254687066|ref|ZP_05150924.1| DNA gyrase subunit B [Bacillus anthracis str. CNEVA-9066]
gi|254724151|ref|ZP_05185936.1| DNA gyrase subunit B [Bacillus anthracis str. A1055]
gi|254742123|ref|ZP_05199810.1| DNA gyrase subunit B [Bacillus anthracis str. Kruger B]
gi|254755967|ref|ZP_05207999.1| DNA gyrase subunit B [Bacillus anthracis str. Vollum]
gi|254761353|ref|ZP_05213375.1| DNA gyrase subunit B [Bacillus anthracis str. Australia 94]
gi|375282106|ref|YP_005102538.1| DNA gyrase subunit B [Bacillus cereus NC7401]
gi|376264036|ref|YP_005116748.1| DNA gyrase subunit B [Bacillus cereus F837/76]
gi|386733878|ref|YP_006207059.1| DNA gyrase subunit B [Bacillus anthracis str. H9401]
gi|421508143|ref|ZP_15955059.1| DNA gyrase subunit B [Bacillus anthracis str. UR-1]
gi|421640490|ref|ZP_16081073.1| DNA gyrase subunit B [Bacillus anthracis str. BF1]
gi|49066055|sp|Q9X3Y6.2|GYRB_BACAN RecName: Full=DNA gyrase subunit B
gi|30253521|gb|AAP24063.1| DNA gyrase, B subunit [Bacillus anthracis str. Ames]
gi|47500407|gb|AAT29083.1| DNA gyrase, B subunit [Bacillus anthracis str. 'Ames Ancestor']
gi|49176971|gb|AAT52347.1| DNA gyrase, B subunit [Bacillus anthracis str. Sterne]
gi|49328242|gb|AAT58888.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51988026|dbj|BAD44714.1| gyraseB [Bacillus anthracis]
gi|164711226|gb|EDR16782.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488]
gi|167510284|gb|EDR85687.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193]
gi|167529497|gb|EDR92247.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442]
gi|170127494|gb|EDS96368.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389]
gi|170666563|gb|EDT17336.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465]
gi|172080205|gb|EDT65297.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174]
gi|190559602|gb|EDV13593.1| DNA gyrase, B subunit [Bacillus anthracis str. Tsiankovskii-I]
gi|195991301|gb|EDX55269.1| DNA gyrase, B subunit [Bacillus cereus W]
gi|196023758|gb|EDX62434.1| DNA gyrase, B subunit [Bacillus cereus 03BB108]
gi|196027204|gb|EDX65824.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99]
gi|206746003|gb|EDZ57399.1| DNA gyrase, B subunit [Bacillus cereus H3081.97]
gi|217063046|gb|ACJ77296.1| DNA gyrase, B subunit [Bacillus cereus AH187]
gi|218537455|gb|ACK89853.1| DNA gyrase, B subunit [Bacillus cereus AH820]
gi|227004428|gb|ACP14171.1| DNA gyrase, B subunit [Bacillus anthracis str. CDC 684]
gi|228595790|gb|EEK53474.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1]
gi|228641260|gb|EEK97567.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26]
gi|228658497|gb|EEL14163.1| DNA gyrase subunit B [Bacillus cereus 95/8201]
gi|228771034|gb|EEM19515.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228810498|gb|EEM56851.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228828154|gb|EEM73878.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228829218|gb|EEM74855.1| DNA gyrase subunit B [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841585|gb|EEM86701.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229267806|gb|ACQ49443.1| DNA gyrase, B subunit [Bacillus anthracis str. A0248]
gi|358350626|dbj|BAL15798.1| DNA gyrase, B subunit [Bacillus cereus NC7401]
gi|364509836|gb|AEW53235.1| DNA gyrase subunit B [Bacillus cereus F837/76]
gi|384383730|gb|AFH81391.1| DNA gyrase subunit B [Bacillus anthracis str. H9401]
gi|401821946|gb|EJT21100.1| DNA gyrase subunit B [Bacillus anthracis str. UR-1]
gi|403392443|gb|EJY89696.1| DNA gyrase subunit B [Bacillus anthracis str. BF1]
Length = 640
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|423572847|ref|ZP_17548966.1| DNA gyrase subunit B [Bacillus cereus MSX-D12]
gi|423608165|ref|ZP_17584057.1| DNA gyrase subunit B [Bacillus cereus VD102]
gi|401216316|gb|EJR23028.1| DNA gyrase subunit B [Bacillus cereus MSX-D12]
gi|401238174|gb|EJR44615.1| DNA gyrase subunit B [Bacillus cereus VD102]
Length = 642
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 158 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 214 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 268 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 328 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 388 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 448 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 507 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 567 PAQPKPGIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 626
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 627 RNFIQENAKYVKNLD 641
>gi|429736495|ref|ZP_19270391.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
gi|429154931|gb|EKX97638.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 138 str. F0429]
Length = 685
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 374/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS +++V V RDG + ++RG
Sbjct: 144 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSTMDVEVRRDGEIHAISFARG-- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT H + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 200 VTQKKLHT--IGTCETTGTRVHFVPDPEIFTVT-TYSFETLKHRLRELAFLNHGITITLV 256
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 257 --DERGEEERRETFHFDGGIRSFVAHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 313
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +KDKD +LSGE VREGLTC
Sbjct: 314 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKDKDGNLSGEDVREGLTC 373
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E L EY E +P V +L K+L A +A
Sbjct: 374 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLMEYFEENPAVTKRVLDKALMASRA 433
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 434 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 493
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 494 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLAKRRYSKIIIMTDADV 552
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 553 DGAHIRTLLLTFFYRYMKPLVDHGHVYIAQPPLYQIRKEKKHFYTYSDEEQAKKLDEIGR 612
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NPE R + Q+ EDA A+ +F+ LMG +V+ R++
Sbjct: 613 DGV-TIQRYKGLGEMNPEQLWETTMNPEGRTMLQVGAEDAEAADELFTILMGDKVEPRRQ 671
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 672 FIEENARLVRNLD 684
>gi|190710601|gb|ACE95131.1| gyrase subunit B [Bacillus thuringiensis serovar neoleonensis]
Length = 627
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQKNA 625
>gi|409198278|ref|ZP_11226941.1| DNA gyrase subunit B [Marinilabilia salmonicolor JCM 21150]
Length = 655
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/560 (47%), Positives = 377/560 (67%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS SL+ V RDG Y Q+YS+GKP
Sbjct: 103 VVMTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSISLKAEVHRDGKIYRQEYSKGKP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
++++ V + D GT I F PD +F ++ ++ +A R+REL+FLN L I L
Sbjct: 161 LSSIE----EVGTTDINGTWITFKPDDSIFNET-EYKYSVLANRMRELSFLNAGLEIVLI 215
Query: 120 RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCS 177
K + D E N +E F++ GL E+V++++ +++ L D + + + + +D+A+ + +
Sbjct: 216 DKREVDDEGNVKSERFYSDEGLLEFVKFIDVNREHLIDQPISISTEKNDVPVDIAIVYNT 275
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++++ + Y N+I TI+GGTH+ G + LTRTL + KS + +SG+ REGL
Sbjct: 276 -SFNENIYSYVNNINTIEGGTHLTGFRRGLTRTLKNWADKSGLLSKLKFDISGDDFREGL 334
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VDQ+V L YLE +P +I++K + A
Sbjct: 335 TAVISVKVAEPQFEGQTKTKLGNSEVSLAVDQAVSTMLNNYLEENPKDAKAIVNKVILAA 394
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR+LV++KSVL LPGKLADCS P +SEIF+VEGDSAGG+AKQGR RR
Sbjct: 395 TARHAARKARELVQRKSVLTGGGLPGKLADCSEKDPAQSEIFLVEGDSAGGTAKQGRSRR 454
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++++EI+N+ ALG+ + ED K E LRYHKI+I
Sbjct: 455 FQAILPLRGKILNVEKALQHRVFESDEIKNIFTALGVNIGTEDDSKALNTEKLRYHKIVI 514
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG HI TL++TFF+RY K L +G +Y+ PPLY +++GK QYC+ DA+ ++
Sbjct: 515 MTDADVDGRHINTLIMTFFFRYMKELIKDGYLYIAAPPLYFLKKGKNEQYCWTDAQRREF 574
Query: 474 KSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
F S IQR+KGLGEM QLW TT+NPE R+L+Q+ ++AAEA+ +FS LMG
Sbjct: 575 VEKFADGKEDSVHIQRYKGLGEMNAEQLWHTTMNPENRLLRQVTYDNAAEADRIFSMLMG 634
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 635 DDVPPRREFIEKNATYANID 654
>gi|190710553|gb|ACE95107.1| gyrase subunit B [Bacillus thuringiensis serovar kyushuensis]
Length = 627
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKVVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|432328169|ref|YP_007246313.1| DNA gyrase, B subunit [Aciduliprofundum sp. MAR08-339]
gi|432134878|gb|AGB04147.1| DNA gyrase, B subunit [Aciduliprofundum sp. MAR08-339]
Length = 643
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/566 (49%), Positives = 386/566 (68%), Gaps = 29/566 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y ++GGLHGVG+ VVN LSE L+V V RD Y Q Y RGKP
Sbjct: 91 IVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKVYVKRDEKIYFQWYVRGKP 148
Query: 61 VTTLTCHVLPVDSKDR-------------QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRE 107
+ V+ + R +GT +RF PD ++F T +F + + ++R+
Sbjct: 149 QCDVHVVGEFVNGQVRWYEAGHEEHFKYPRGTYVRFKPDPEIFETT-EFKYGIVKKKLRD 207
Query: 108 LAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDG 166
LAFLN + I L D ++ + + GG+ E+V++LN LH DV+ + DG
Sbjct: 208 LAFLNRGVEIEL----EDERTGKHEVFHYEGGIVEFVKFLNEGYNSLHKDVIYGMDEQDG 263
Query: 167 ITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 226
I ++ ALQ+ +D+ S+ ++ + N+I T++GGTH+ G +++LT+ +N K +KD +
Sbjct: 264 IIVEFALQY-NDSTSENLIAFVNTINTVEGGTHVSGFRSALTKAINDFAKGKGMLKD--M 320
Query: 227 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 286
SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V L+ Y E HPDV
Sbjct: 321 SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSVVNRILSTYFEEHPDVA 380
Query: 287 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 346
+I++K+++A +A +AA++AR+L R+K+ L S LPGKLADC+S PEE+E+FIVEGDSA
Sbjct: 381 TNIVTKAIAAARARIAARKARELARRKNYLESLDLPGKLADCTSEDPEEAELFIVEGDSA 440
Query: 347 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 406
GGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G GV+ EDF L
Sbjct: 441 GGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTGVR-EDFDYSKL 499
Query: 407 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD 466
RYHKIII+TDADVDGAHIRTLLLTFFYRY L + G +Y+ PLY+++RGK++ Y Y
Sbjct: 500 RYHKIIIMTDADVDGAHIRTLLLTFFYRYMPELIERGHVYIAQAPLYRIQRGKEIYYVYS 559
Query: 467 DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 526
D E +++ +P NA S+QRFKGLGEM P QLWETT++PE+R L ++ IEDAAEA+ +F
Sbjct: 560 DEEKEEMLKKYP-NA--SVQRFKGLGEMNPQQLWETTMDPEKRRLIRVTIEDAAEADRLF 616
Query: 527 SSLMGARVDTRKE-LIQNAANLVNLD 551
S LMG V+ R+E +I++A ++N+D
Sbjct: 617 SILMGEAVEPRREFIIEHAREVMNID 642
>gi|229199683|ref|ZP_04326326.1| DNA gyrase subunit B [Bacillus cereus m1293]
gi|228583778|gb|EEK41953.1| DNA gyrase subunit B [Bacillus cereus m1293]
Length = 640
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|42779086|ref|NP_976333.1| DNA gyrase subunit B [Bacillus cereus ATCC 10987]
gi|384177915|ref|YP_005563677.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402554403|ref|YP_006595674.1| DNA gyrase subunit B [Bacillus cereus FRI-35]
gi|42735001|gb|AAS38941.1| DNA gyrase, B subunit [Bacillus cereus ATCC 10987]
gi|324323999|gb|ADY19259.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401795613|gb|AFQ09472.1| DNA gyrase subunit B [Bacillus cereus FRI-35]
Length = 640
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|334338619|ref|YP_004543599.1| DNA gyrase subunit B [Desulfotomaculum ruminis DSM 2154]
gi|334089973|gb|AEG58313.1| DNA gyrase, B subunit [Desulfotomaculum ruminis DSM 2154]
Length = 639
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/529 (51%), Positives = 364/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS LEV + DG Y+QKYSRG PVT L + GT+I F
Sbjct: 120 LHGVGVSVVNALSSELEVEIKLDGNLYYQKYSRGIPVTELKI----IGKSKSTGTKITFK 175
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD+++F + F TI+ R+RELA+LN + I LR E + E Q +Y GG++++V
Sbjct: 176 PDEEIFEELV-FSLETISQRMRELAYLNKGIKIILRDERKETENEQVFQY--EGGIQDFV 232
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K+ LH + + + +++++A+Q+ +D+YS+TML YAN+I T +GGTH G
Sbjct: 233 KHLNRNKQVLHAKPIYLSGEKEYVSVEIAMQY-NDSYSETMLSYANNIHTTEGGTHEVGF 291
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N G+ +K+ D +L GE +REG T +ISV+VP P+FEGQTKT+LGN EV
Sbjct: 292 KTALTRIINDYGRTHNILKNNDPNLIGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEV 351
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD E L+ YLE +P V I+ K ++A +A AA++AR+L R+KS L + SLPG
Sbjct: 352 RGIVDSIFSEALSTYLEENPSVAKKIIEKGVTASRAREAARKARELTRRKSALETMSLPG 411
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCS P E+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ + NE
Sbjct: 412 KLADCSEKDPSLCELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKILANE 471
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I ALG G+ GEDF RYHKI+I+TDADVDG+HIRTLL+TFFYR+ + L + G
Sbjct: 472 EIRAMITALGCGI-GEDFDISKARYHKIVIMTDADVDGSHIRTLLMTFFYRHMRELIEAG 530
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+YV PPLY+ +GK Y Y D EL+++ + + +IQR+KGLGEM P QLWETT
Sbjct: 531 YLYVAQPPLYRARKGKHDSYLYSDEELEQLLKRIGYDNV-NIQRYKGLGEMNPEQLWETT 589
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
++P+ R + Q+ +EDA EA+ FS LMG RV+ RK+ IQ A V NLD
Sbjct: 590 MDPDTRTMLQVTLEDALEADATFSMLMGDRVEPRKDFIQENARYVRNLD 638
>gi|327401204|ref|YP_004342043.1| DNA gyrase subunit B [Archaeoglobus veneficus SNP6]
gi|327316712|gb|AEA47328.1| DNA gyrase, B subunit [Archaeoglobus veneficus SNP6]
Length = 621
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/552 (50%), Positives = 378/552 (68%), Gaps = 21/552 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y V+GGLHGVGLSVVNALSE LEV V R+G Y+QKY RG P
Sbjct: 89 IVLTKLHAGGKF--NKKAYKVAGGLHGVGLSVVNALSEWLEVWVKRNGKIYYQKYERGVP 146
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + GT+IRF PD+++F T +F + +A R++ELA+LN + + L
Sbjct: 147 VTPLQV----IGETKETGTKIRFKPDEEIFETT-EFRWDIVAQRLKELAYLNKGIRLKLI 201
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E S K Y+E G++ +V LN +K +HDV+ F ++ +GI +++A+Q+ +D
Sbjct: 202 DERSGKSKEFYSE----DGIKGFVAQLNKNKPVIHDVIHFSEEKNGIMVEVAIQF-TDTE 256
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +L +AN+I TI+GGTH G +A LTR +N GKK VK K L+G +REGLT +
Sbjct: 257 IENVLFFANNINTIEGGTHAVGFRAGLTRAINEFGKKY--VK-KFKPLTGADIREGLTAV 313
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+VP P+FEGQTKT+L N EV+ VV+ V + ++LE HP+ + I+ K + A+KA
Sbjct: 314 VSVKVPEPQFEGQTKTKLTNSEVKTVVESIVYSEVLKWLEEHPNEANRIIEKCILAMKAR 373
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR++VR+K + S +LPGKLADCSS PEE E+FIVEG+SAGGSAKQ RDRRFQA
Sbjct: 374 EAARKAREIVRRKGEI-SITLPGKLADCSSKNPEERELFIVEGESAGGSAKQARDRRFQA 432
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKI+NVE+ A +NEEI+ + A+ G+DF RY ++II+TDADVD
Sbjct: 433 ILPIRGKIINVEKAGMAKALRNEEIKAIAAAI-GAGIGKDFDITKARYRRVIIMTDADVD 491
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY K L + G +Y+ PPLY+V++GK+V Y Y D EL+ + N
Sbjct: 492 GAHIRTLLLTFFYRYMKPLIESGYLYIAQPPLYRVKKGKKVYYVYSDRELEDLLERI-GN 550
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A +QR+KGLGEM P QLWETT+NP R L Q+ +EDAA A +FS LMG V+ RK
Sbjct: 551 A--EVQRYKGLGEMNPEQLWETTMNPHNRYLIQVTLEDAARAEELFSVLMGEDVEARKRF 608
Query: 541 I-QNAANLVNLD 551
I +++ + NLD
Sbjct: 609 IMEHSKEVRNLD 620
>gi|190710561|gb|ACE95111.1| gyrase subunit B [Bacillus thuringiensis serovar novosibirsk]
Length = 627
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 149 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLL FFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLMFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|145577971|gb|ABP82704.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 632
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 378/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RD ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDRKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T A R+RELAFLN KLTI
Sbjct: 149 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTSATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNNKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|145577961|gb|ABP82699.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
gi|145578027|gb|ABP82732.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar poloniensis]
Length = 632
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|239616758|ref|YP_002940080.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
gi|239505589|gb|ACR79076.1| DNA gyrase, B subunit [Kosmotoga olearia TBF 19.5.1]
Length = 631
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/556 (50%), Positives = 380/556 (68%), Gaps = 29/556 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y +SGGLHGVG+SVVNALSE +EV V+RDG Y Q+Y RGKP
Sbjct: 92 VVMTTLHAGGKF--SKDSYKISGGLHGVGVSVVNALSEWMEVKVYRDGKIYRQRYERGKP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D++G+ + F PD VFTT FD + + R +ELAFLNP++TI
Sbjct: 150 TTPVEI----IGETDKRGSLVAFKPDSLVFTTT-DFDFDILESRFKELAFLNPRVTIEF- 203
Query: 121 KEDSDPEKNQYNE---YFFAGGLEEYVQWLN-----TDKKPLHDVVGFRKDVDGITIDLA 172
E +Y+E + F GG+ E+V++LN +K+P + + G DV I LA
Sbjct: 204 ------EDRRYDEKRVFHFEGGIVEFVKYLNRKKTAINKEPFY-IEGTYNDV---KIQLA 253
Query: 173 LQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEH 232
+Q+ ++AY + +L + N+I+T++GGTH+ G K LT+ +N +K +KDKD +L GE
Sbjct: 254 MQY-TNAYDENILTFVNNIKTVEGGTHLTGFKTVLTKMMNDYARKLNVLKDKDPNLQGED 312
Query: 233 VREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSK 292
VREGLT ++SV V P+FEGQTK +LGN EV + V + +++ L E + H L +I+ K
Sbjct: 313 VREGLTAVLSVFVKEPQFEGQTKAKLGNEEVYEAVIKVLRDKLPEVFDYHTKELKAIIIK 372
Query: 293 SLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQ 352
+L A KA +AAK+AR+++R+K+ L +++LPGKLADC+ST E +E+FIVEGDSAGGSAKQ
Sbjct: 373 ALDAAKARVAAKKAREMIRRKNALENTTLPGKLADCTSTDLETTELFIVEGDSAGGSAKQ 432
Query: 353 GRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKII 412
RDR FQAILPLRGKILNVE+ + KNE+I N+I A+G G+ G+D K E LRY KII
Sbjct: 433 ARDREFQAILPLRGKILNVEKSSFEKLLKNEQINNIIVAIGTGI-GDDCKLENLRYGKII 491
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDGAHIRTLLLT FYRY L + G IY+ PLYKVE ++ Y Y D EL++
Sbjct: 492 IMTDADVDGAHIRTLLLTLFYRYMTPLINAGHIYIAQAPLYKVELNRKKYYFYSDEELEE 551
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
+ + SIQR+KGLGEM P QLWETT+NPE R L ++ +ED EA+ VF+ LMG+
Sbjct: 552 FLKNNDGKKV-SIQRYKGLGEMNPDQLWETTMNPESRKLIKIEMEDVEEADRVFTILMGS 610
Query: 533 RVDTRKELIQNAANLV 548
V+ R+E I+ A ++
Sbjct: 611 EVEERREFIERHALMI 626
>gi|303234457|ref|ZP_07321095.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
gi|302494412|gb|EFL54180.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
Length = 638
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/557 (49%), Positives = 383/557 (68%), Gaps = 21/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q++ +GK V
Sbjct: 95 VLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQRFEKGKTV 152
Query: 62 TTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T LT V R GT I F PD +F T + FD N +A R RE+AFLN + I
Sbjct: 153 TGLTV----VKENVRGTGTTIEFMPDDTIFET-LNFDRNVLAKRFREMAFLNKGVKIEFA 207
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
E++ Y E F + GG++ +V+++N KKPL H+V+ + D +++A+Q+ ++
Sbjct: 208 -----DERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQY-TE 261
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG+ VREG+T
Sbjct: 262 SYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGIT 321
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+ K+L++ K
Sbjct: 322 AVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKALASQK 381
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSAK GRD +F
Sbjct: 382 ARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKGGRDNKF 441
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY KI+I+TDAD
Sbjct: 442 QAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGKIVIMTDAD 500
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSF 477
VDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + EL++ +
Sbjct: 501 VDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQELEEALEKY 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVD 535
+ +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F LMG V+
Sbjct: 561 GERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRVLIKVEIDGEDENELDNTFDVLMGDNVE 620
Query: 536 TRKELI-QNAANLVNLD 551
R+E I QNA N+D
Sbjct: 621 PRREFIEQNAVYAQNID 637
>gi|190710581|gb|ACE95121.1| gyrase subunit B [Bacillus thuringiensis serovar sotto]
Length = 627
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/548 (50%), Positives = 375/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNSIQENA 625
>gi|82749782|ref|YP_415523.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
gi|82655313|emb|CAI79693.1| DNA gyrase subunit B [Staphylococcus aureus RF122]
Length = 644
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 374/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G+DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGI-GDDFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSKLNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|78707355|gb|ABB46483.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/545 (49%), Positives = 357/545 (65%), Gaps = 15/545 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+T LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y QKY RG P
Sbjct: 93 ILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQKYERGIPA 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + D+ GT I F D +FT + +++ T+ RI++LAFLN L + L
Sbjct: 151 YDLKIK----GNTDKTGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNKGLKLNLI- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+++ + + GG+ EYV++LN K +H D++ K+ DGIT++LA+Q+ D+Y
Sbjct: 206 -DDRFEESKIESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELAMQFV-DSY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + + N+I T +GG H +G K +LTR ++ K KD S+SGE REGLT I
Sbjct: 264 SPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGEDTREGLTAI 321
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K L A +A
Sbjct: 322 ISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPTQAKAIVEKVLLATRAR 381
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQGRD FQA
Sbjct: 382 VAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQGRDSEFQA 441
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
I+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+I+TDADVD
Sbjct: 442 IMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIVIMTDADVD 500
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL ++ + +
Sbjct: 501 GAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNEILKTIETK 560
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG V+ RKE
Sbjct: 561 P--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGEEVEPRKEF 618
Query: 541 IQNAA 545
IQN A
Sbjct: 619 IQNNA 623
>gi|190710547|gb|ACE95104.1| gyrase subunit B [Bacillus thuringiensis serovar alesti]
Length = 627
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/546 (50%), Positives = 374/546 (68%), Gaps = 12/546 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN + + +
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTI- 203
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED K Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ ++
Sbjct: 204 -EDKRGHK-QKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEG 260
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGLT
Sbjct: 261 YTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTA 320
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A +A
Sbjct: 321 IVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARA 380
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 381 RVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQ 440
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDADV
Sbjct: 441 AILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADV 499
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+
Sbjct: 500 DGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPA 559
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R+
Sbjct: 560 QPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRN 619
Query: 540 LIQNAA 545
IQ A
Sbjct: 620 FIQENA 625
>gi|374321361|ref|YP_005074490.1| DNA gyrase subunit B [Paenibacillus terrae HPL-003]
gi|357200370|gb|AET58267.1| DNA gyrase subunit B [Paenibacillus terrae HPL-003]
Length = 636
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/556 (50%), Positives = 377/556 (67%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKMIVHVKRDGHMYEQEYHRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D GT+ F+PD Q+FT +D+ T+ RIRELAFLN + I+L
Sbjct: 153 ----QYDVRVIGDTDETGTQTTFYPDDQIFTETTVYDYETLQTRIRELAFLNKGIAISL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D + + + GG+ EYVQ+LN ++ LH+ V G R D I +++ALQ+
Sbjct: 208 ---TDERTGASDMFHYEGGISEYVQFLNQKREALHEQPIYVEGSR---DMIQVEVALQY- 260
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD +L+G+ VREG
Sbjct: 261 NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKNGFIKDNTANLTGDDVREG 320
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+LE +P V ++ KSL A
Sbjct: 321 LTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLEENPSVSRRVVDKSLQA 380
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+KS L SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 381 ARAREAARKARELTRRKSALEISSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 440
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + ++EI++++ A+G G+ G+DF RYHK+II+TD
Sbjct: 441 HFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI-GDDFDIAKARYHKVIIMTD 499
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + + D G +Y+ PPL+KVER K V+Y +AE + S
Sbjct: 500 ADVDGAHIRTLLLTFFYRYLRKIIDAGYVYIAQPPLFKVERNKVVRYANSEAERDTIISE 559
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F NA Y++QR+KGLGEM QLWETT++PE R + Q+ I DA A+ +F +LMG V+
Sbjct: 560 FGENAKYNVQRYKGLGEMNATQLWETTMDPESRTMLQVTISDAMLADTMFDTLMGDNVEP 619
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 620 RRDFIQEHAKYVKNLD 635
>gi|255692967|ref|ZP_05416642.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|423301203|ref|ZP_17279227.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
gi|260621278|gb|EEX44149.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565]
gi|408471804|gb|EKJ90333.1| DNA gyrase, B subunit [Bacteroides finegoldii CL09T03C10]
Length = 652
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/558 (47%), Positives = 372/558 (66%), Gaps = 17/558 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRGGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I+L R
Sbjct: 160 S----VKEVGTSDITGTRQQFWPDGSIFTETV-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLSYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ ++EEI+N+ ALG+ + ED KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEDDSKEANIEKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY +GK +YC+ DA+L+
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCTKGKVKEYCWTDAQLQNFID 573
Query: 476 SF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
++ S + IQR+KGLGEM QLW TT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSESAVHIQRYKGLGEMNAEQLWSTTMDPENRMLKQVNIDNAAEADYIFSMLMGED 633
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 634 VGPRREFIEENATYANID 651
>gi|190710597|gb|ACE95129.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIQYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|417925090|ref|ZP_12568517.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
gi|341592387|gb|EGS35273.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
Length = 638
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/557 (49%), Positives = 383/557 (68%), Gaps = 21/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q++ +GK V
Sbjct: 95 VLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQRFEKGKTV 152
Query: 62 TTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T LT V R GT I F PD +F T + FD N +A R RE+AFLN + I
Sbjct: 153 TGLTV----VKENVRGTGTTIEFLPDDTIFET-LNFDRNVLAKRFREMAFLNKGVKIEFA 207
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
E++ Y E F + GG++ +V+++N KKPL H+V+ + D +++A+Q+ ++
Sbjct: 208 -----DERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQY-TE 261
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG+ VREG+T
Sbjct: 262 SYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGIT 321
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+ K+L++ K
Sbjct: 322 AVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKALASQK 381
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSAK GRD +F
Sbjct: 382 ARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKGGRDNKF 441
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY KI+I+TDAD
Sbjct: 442 QAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGKIVIMTDAD 500
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSF 477
VDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + EL++ +
Sbjct: 501 VDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQELEEALEKY 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVD 535
+ +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F LMG V+
Sbjct: 561 GERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFDVLMGDNVE 620
Query: 536 TRKELI-QNAANLVNLD 551
R+E I QNA N+D
Sbjct: 621 PRREFIEQNAVYAQNID 637
>gi|302380141|ref|ZP_07268614.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
gi|302312083|gb|EFK94091.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
Length = 638
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/557 (49%), Positives = 383/557 (68%), Gaps = 21/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q++ +GK V
Sbjct: 95 VLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQRFEKGKTV 152
Query: 62 TTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T LT V R GT I F PD +F T + FD N +A R RE+AFLN + I
Sbjct: 153 TGLTV----VKENVRGTGTTIEFMPDDTIFET-LNFDRNVLAKRFREMAFLNKGVKIEFA 207
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
E++ Y E F + GG++ +V+++N KKPL H+V+ + D +++A+Q+ ++
Sbjct: 208 -----DERDGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQY-TE 261
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG+ VREG+T
Sbjct: 262 SYNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKSILKEKDDNLSGDDVREGIT 321
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+ K+L++ K
Sbjct: 322 AVVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKALASQK 381
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSAK GRD +F
Sbjct: 382 ARLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKGGRDNKF 441
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + +EEI+ +I A G G+ G++F LRY KI+I+TDAD
Sbjct: 442 QAILPLRGKILNVEKAHLERVLNSEEIKAMITAFGTGI-GKNFDISKLRYGKIVIMTDAD 500
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSF 477
VDGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + EL++ +
Sbjct: 501 VDGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEQELEEALEKY 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVD 535
+ +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F LMG V+
Sbjct: 561 GERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFDVLMGDNVE 620
Query: 536 TRKELI-QNAANLVNLD 551
R+E I QNA N+D
Sbjct: 621 PRREFIEQNAVYAQNID 637
>gi|190710569|gb|ACE95115.1| gyrase subunit B [Bacillus thuringiensis serovar alesti]
Length = 627
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/524 (50%), Positives = 360/524 (68%), Gaps = 14/524 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS LEV V RDG ++QKY RG PV L + D+ GT RF
Sbjct: 113 LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIPVADLKV----IGDTDKTGTITRFK 168
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALRKEDSDPEKNQYNEYFFAGGLEE 142
PD ++F +++ +T+A R+RELAFLN KLTI ++E Q E+ + GG++
Sbjct: 169 PDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIEDKRE-----HKQKKEFHYEGGIKS 223
Query: 143 YVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 201
YV+ LN K+P+H+ V DGI +++ALQ+ ++ Y++ + + N+I T +GGTH
Sbjct: 224 YVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-NEGYTNHIYSFTNNIHTYEGGTHEV 282
Query: 202 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 261
G K +LTR +N G+K+ +KD D +L+GE VREGLT I+S++ PNP+FEGQTKT+LGN
Sbjct: 283 GFKTALTRVINDYGRKNNILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNS 342
Query: 262 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 321
E R + + E ++L +P+V I+ K A +A +AAK+AR+L R+KS L SSL
Sbjct: 343 EARTITESVFSEAFEKFLLENPNVARKIVDKGTMAARARVAAKKARELTRRKSALEVSSL 402
Query: 322 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 381
PGKLADCSS P SEI+IVEGDSAGGSAKQGRDR FQAILPL+GKI+NVE+ +
Sbjct: 403 PGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILS 462
Query: 382 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 441
N+E++ +I A+G + G DF E RYHK+II+TDADVDGAHIRTLLLTFFYRY + + +
Sbjct: 463 NDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIE 521
Query: 442 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 501
G IY+ PPL+KV++GK++QY Y+D EL+K+ + P+ IQR+KGLGEM P QLWE
Sbjct: 522 CGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWE 581
Query: 502 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAA 545
TT++PE R L Q+ ++DA EA+ F LMG +V+ R+ IQ A
Sbjct: 582 TTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENA 625
>gi|326802621|ref|YP_004320439.1| DNA gyrase subunit B [Aerococcus urinae ACS-120-V-Col10a]
gi|326650211|gb|AEA00394.1| DNA gyrase, B subunit [Aerococcus urinae ACS-120-V-Col10a]
Length = 660
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/551 (49%), Positives = 359/551 (65%), Gaps = 11/551 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFGG S LHGVG SVVNALS L V V+RDG Y Q+YSRG V
Sbjct: 119 VFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTKLRVEVYRDGKIYQQEYSRGHIV 176
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L V D+ GT + F D ++FT +D T+ R+RELAFLN L I L
Sbjct: 177 SDLKV----VGESDKTGTVVNFVADPEIFTDTTDYDFQTLNKRVRELAFLNKGLHITL-- 230
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAY 180
ED E +Q Y + GG++EYVQ+LN +K+ L + V +D I +++A Q+ + Y
Sbjct: 231 EDRREEDSQEVAYQYEGGIKEYVQYLNENKEILFEEPVYLEGQMDDIEVEVAFQYTA-GY 289
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +AN+I T +GGTH G+K +LTRT+N + +K+KD +LSGE VREGLT I
Sbjct: 290 HSNFMSFANNIHTFEGGTHESGIKTALTRTINDYARSQNLLKEKDDNLSGEDVREGLTLI 349
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S+R PNP+FEGQTK +LGN EVR + D+ ++L ++L P++ I+ K + A KA
Sbjct: 350 VSIRHPNPQFEGQTKMKLGNSEVRTITDRLFGQHLEQFLYETPNIARQIVDKGILASKAR 409
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRAR++ R+KS L S+LPGKLADCSS PEE E+FIVEG+SAGGSAK GRDR FQA
Sbjct: 410 QAAKRAREMTRKKSGLEISNLPGKLADCSSRVPEECELFIVEGNSAGGSAKLGRDRHFQA 469
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G G DF RYHK++I+TDADVD
Sbjct: 470 ILPIRGKILNVEKASMDRILANEEIRSLFTAMGTGW-GNDFDVTKARYHKLVIMTDADVD 528
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLT YRY + L D G IY+ VPPLY+V +GK V Y D EL +
Sbjct: 529 GAHIRTLLLTLIYRYMRPLLDAGYIYIAVPPLYQVRQGKNVHYVNSDQELNDYMKTLAER 588
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
++QR+KGLGEM QLWETT++P QR + Q+ ++DA EA+ S LMG V R++
Sbjct: 589 PRPAVQRYKGLGEMDAEQLWETTMDPTQRQMLQVTVDDAQEADRNISMLMGDLVAPRRDF 648
Query: 541 IQNAANLVNLD 551
I+N A +D
Sbjct: 649 IENNATYATID 659
>gi|145577963|gb|ABP82700.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
Length = 632
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENARYVKNLD 632
>gi|288925541|ref|ZP_06419474.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315606674|ref|ZP_07881685.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|402307320|ref|ZP_10826346.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
gi|288337757|gb|EFC76110.1| DNA gyrase, B subunit [Prevotella buccae D17]
gi|315251684|gb|EFU31662.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae
ATCC 33574]
gi|400378834|gb|EJP31685.1| DNA gyrase, B subunit [Prevotella sp. MSX73]
Length = 656
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/567 (47%), Positives = 376/567 (66%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V DRQGTR +FWPD VFTT + + + IA R+RELAFLN + I LR
Sbjct: 156 LYPVKV----VGETDRQGTRQQFWPDPTVFTTTV-YKWDIIASRMRELAFLNAGIRITLR 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
D E E F A GL+E+V++++ + L D V+ + + G+ I++A+ + +D
Sbjct: 211 DLRPDEEGKTREEVFHAEQGLKEFVRYVDRHRTHLFDDVIYLKTEKQGVPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTR L + SK ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRVLKAYADNDAQISKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALNNYLEEHPVEAKKICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++KSV+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKSVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCTYKKASEYCYTEQQ 569
Query: 470 L-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
K V+ AL++ QR+KGLGEM P QLWETT++P R+LKQ+ I++AAEA+
Sbjct: 570 RQAFIDKYVEGREDDKALHT-QRYKGLGEMNPEQLWETTMDPATRLLKQVNIQNAAEADE 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVEPRREFIEKNATYANID 655
>gi|153809174|ref|ZP_01961842.1| hypothetical protein BACCAC_03484 [Bacteroides caccae ATCC 43185]
gi|423220418|ref|ZP_17206913.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
gi|149128150|gb|EDM19370.1| DNA gyrase, B subunit [Bacteroides caccae ATCC 43185]
gi|392623495|gb|EIY17598.1| DNA gyrase, B subunit [Bacteroides caccae CL03T12C61]
Length = 652
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/559 (47%), Positives = 376/559 (67%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I L R
Sbjct: 160 S----VKEVGTADITGTRQQFWPDDTIFTETV-YDYKILASRLRELAYLNAGLRITLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLSYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|302388606|ref|YP_003824427.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
gi|302199234|gb|ADL06804.1| DNA gyrase subunit B [Thermosediminibacter oceani DSM 16646]
Length = 637
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/554 (49%), Positives = 385/554 (69%), Gaps = 18/554 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKFG + GY VSGGLHGVG+SVVNALS+ LEV V RDG +Y Q+Y RGKPVT
Sbjct: 96 LTMLHAGGKFG--TGGYKVSGGLHGVGVSVVNALSKWLEVEVKRDGFKYFQRYERGKPVT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
V + GT+I F PD Q+F F+++ +A R+RE AFLN L I ++
Sbjct: 154 ----EVKKIGEASDTGTKITFMPDDQIFEDT-SFNYDILAQRLREQAFLNRGLKIEIK-- 206
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG---ITIDLALQWCSDA 179
D + + + GG+ +V++LN +K LH+ + + +++ALQ+ +D+
Sbjct: 207 --DLRTGKEQVFHYEGGIVSFVKYLNRNKDVLHEDPIYMRAASQEGEWEVEVALQY-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L +AN+I T +GGTH+ G K++LTR++N +K +K++D +LSG+ VREGLT
Sbjct: 264 YAENVLSFANNINTQEGGTHLVGFKSALTRSINDYARKMNLLKEQDPNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ NP+FEGQTKT+LGN E+R +V+ V + + +LE +P V I+ K++SA +A
Sbjct: 324 VISVKLVNPQFEGQTKTKLGNSEMRGIVESVVGDAMNRFLEENPSVARVIVEKAISAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LVR+K+ L +SLPGKLADC P E+++VEGDSAGGSAKQGRD RFQ
Sbjct: 384 REAARKARELVRRKNALDRTSLPGKLADCREKDPRLCELYLVEGDSAGGSAKQGRDPRFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + NEEI+ +I ALG G+ G+DF E LRYHKII++ DADV
Sbjct: 444 AILPLRGKILNVEKARLDKILGNEEIRAMITALGTGI-GDDFDIEKLRYHKIILMADADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YRY + L + G +Y+ PPLY+V +GK+V Y Y D ELK +
Sbjct: 503 DGAHIRTLLLTFLYRYMRPLIEAGMVYIAQPPLYQVSKGKEVYYAYSDEELKAILERLGK 562
Query: 480 NALYS-IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + ++RFKGLGEM QLW+TT+NP+ R + ++ +EDA EA+ +F+ LMG +V+ R+
Sbjct: 563 DRDKAEVKRFKGLGEMNADQLWDTTMNPKTRTILKVNLEDAIEADEIFTILMGEKVEPRR 622
Query: 539 ELI-QNAANLVNLD 551
+ I ++AA + NLD
Sbjct: 623 QFIFEHAAEVRNLD 636
>gi|169830224|ref|YP_001716206.1| DNA gyrase subunit B [Candidatus Desulforudis audaxviator MP104C]
gi|169637068|gb|ACA58574.1| DNA gyrase, B subunit [Candidatus Desulforudis audaxviator MP104C]
Length = 635
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/557 (50%), Positives = 379/557 (68%), Gaps = 23/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKFGG+ Y +SGGLHGVG+SVVNALS +EV V R+G Y Q++ RG
Sbjct: 95 VVLTRLHAGGKFGGTQ--YKISGGLHGVGVSVVNALSRRMEVEVKREGYRYRQEFERGLA 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L +D D GTR+ F PD +F ++F ++ +A R+REL+FLN +T+ LR
Sbjct: 153 TGELEL----LDEADETGTRVTFIPDPDIFEE-VEFQYDVVAKRLRELSFLNAGVTLVLR 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
E + +K Y +AGG+ ++V+ LN K+ L D + +G+ +++A+Q+ ++
Sbjct: 208 DERTGRDKV----YQYAGGIRDFVRHLNLHKEVLPADPIYVEDHKNGVWVEVAVQYVVNS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+ + YAN+I T+DGGTH G K++LTRT+N +K VK+ SLSGE +REGLT
Sbjct: 264 DRELIFSYANTIHTVDGGTHEAGFKSALTRTINDYARKYNLVKND--SLSGEDIREGLTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+I+V+VP P+FEGQTKT+LGN EVR +VD V + L YLE HP I+ +++ A +A
Sbjct: 322 VINVKVPEPQFEGQTKTKLGNSEVRGLVDWVVSQRLAAYLEEHPTEARQIVQRAVVASRA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+L ++KS+L S++LPGKLADCS P+ SE+++VEGDSAGGSAKQGRDR FQ
Sbjct: 382 REAARRARELTKRKSLLESATLPGKLADCSRRDPQHSELYLVEGDSAGGSAKQGRDREFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILN E+ + NEEI+ LI A+G G GEDF RYH+I+I+TDADV
Sbjct: 442 AILPLRGKILNAEKARRDKLLGNEEIRALITAIGTGF-GEDFDLAKARYHRIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RG-KQVQYCYDDAELKKVKSSF 477
DG+HIRTLLLTFFYRY K L D G +Y+ PPLY+V +G K Y Y D +L++ F
Sbjct: 501 DGSHIRTLLLTFFYRYMKPLIDAGYVYIAQPPLYRVSGKGRKNGVYLYSDQQLEQF---F 557
Query: 478 PSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
N +SIQR+KGLGEM P QLW+TTL+PE R + Q+ +EDA A + S+LMG +V+
Sbjct: 558 RENGRQNWSIQRYKGLGEMNPEQLWDTTLDPENRTMLQVTLEDALAAEQLLSTLMGEQVE 617
Query: 536 TRKELIQNAANLV-NLD 551
R+E IQ A V NLD
Sbjct: 618 PRREFIQQHAREVRNLD 634
>gi|347541857|ref|YP_004856493.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346984892|dbj|BAK80567.1| DNA gyrase subunit B [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 639
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/558 (50%), Positives = 382/558 (68%), Gaps = 22/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF G+ GY +SGGLHGVG SVVNALSE V V R G Y Q+YSRGKP
Sbjct: 96 VIMTVLHAGGKFNGN--GYKISGGLHGVGASVVNALSEKCYVKVKRGGDIYFQEYSRGKP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V GT F PDK++FT +++D + ++ R+RELAFLN + I+L
Sbjct: 154 ID----DVKKVGRTTENGTETFFIPDKEIFTETVEYDFDVLSQRLRELAFLNAGIRISLI 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D +N +F+ GG++E+V+ +N K+ L D V+ F + + + +A+Q+ +D+
Sbjct: 210 DLRFDKSEN----FFYIGGVKEFVKHINKGKECLFDDVIYFEHSKNDLNLQIAMQY-TDS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK----DKDISLSGEHVRE 235
Y++ +L Y N+I T +GGTH+ G K SLTR +N KK +K D+ SL GE +RE
Sbjct: 265 YNENVLTYVNNIFTQEGGTHLIGFKTSLTRCVNDYAKKFNYIKEHNKDEIKSLIGEDIRE 324
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GL C++SV++PNP+FEGQTKT+LGN EVR +VD +E+L +P++ + K++
Sbjct: 325 GLVCVLSVKIPNPQFEGQTKTKLGNSEVRSIVDSIFFNCFSEFLNENPNIGKIVCEKAII 384
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA AAK+AR+ R KSVL +SLPGKLADCSS PEE EI+IVEGDSAGGSAKQGRD
Sbjct: 385 AAKAREAAKKARETTR-KSVLDRTSLPGKLADCSSKNPEECEIYIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R+FQAILPL GKI+NVE++ + +E I+ +I A G G+ G++F +RY++II++T
Sbjct: 444 RKFQAILPLAGKIMNVEKQRIFKILSSETIRCMITAFGCGI-GQEFDVNKIRYNRIILMT 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVK 474
DADVDG+HIRTLLLTF YRY + ++G +Y+ PPLYKV K+ YCY + EL K+K
Sbjct: 503 DADVDGSHIRTLLLTFLYRYMPEVIEKGFVYIARPPLYKVTESKKEFYCYTEEELNLKLK 562
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
SN + IQR+KGLGEM P QLWETT+NPE R L ++ IE A+ A+ +FS LMG +V
Sbjct: 563 EINKSNLI--IQRYKGLGEMNPSQLWETTMNPETRTLLRVTIEHASYADEIFSILMGDKV 620
Query: 535 DTRKELIQNAA-NLVNLD 551
+ R+E I+N A ++ NLD
Sbjct: 621 EPRREFIRNNARDVKNLD 638
>gi|296452676|ref|ZP_06894367.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296880071|ref|ZP_06904040.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
gi|296258458|gb|EFH05362.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP08]
gi|296428938|gb|EFH14816.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Clostridium
difficile NAP07]
Length = 633
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/529 (50%), Positives = 360/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS+ + V+ +G Y Q Y +G P + L V +GT I+F
Sbjct: 114 LHGVGVSVVNALSKWMVAEVYLNGKIYKQTYEKGLPTSKLEV----VGESHDKGTMIQFM 169
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD+ +F I+F + T+ R+REL+FLN + I ED + + E+ + GGL EY+
Sbjct: 170 PDETIFD-EIEFKYETLEYRLRELSFLNKGIKIVF--EDKREGQEKRKEFHYTGGLVEYI 226
Query: 145 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN + +HD +V K VD ++LA+Q+ +D Y++ + +AN+I T +GG+H+ G
Sbjct: 227 KYLNKSRTGIHDDIVYIDKKVDDCFVELAMQY-TDGYTENIYSFANNINTHEGGSHLSGF 285
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA+LT+T+N K++K +K+ D++L GE +REGLT ++SV++P P+FEGQTKT+LGN +
Sbjct: 286 KAALTKTVNDYAKRNKFLKENDVNLLGEDIREGLTAVVSVKLPEPQFEGQTKTKLGNSFM 345
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD + L +LE +P I+ K+L A +A AAK+AR+L R+KSVL S+SLPG
Sbjct: 346 RGIVDSVTVDELGSFLEENPVTARIIVDKALRAQRAREAAKKARELTRRKSVLESTSLPG 405
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++
Sbjct: 406 KLADCAEKDPAKSEIFLVEGDSAGGSAKQGRDRNSQAILPLRGKILNVEKSRLDRILSSD 465
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+N+I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFF+RY + L DEG
Sbjct: 466 EIKNMITAYGCGI-GEDFDIDKARYHKIIIMTDADVDGAHIRTLLLTFFFRYMRPLIDEG 524
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y PPLYKV + K+ Y Y D EL + N + +QR+KGLGEM QLWETT
Sbjct: 525 YVYAAQPPLYKVTKQKKEHYVYSDKELNILLDEIGRNGV-ELQRYKGLGEMNAEQLWETT 583
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R L Q+ +EDAA A+ VFS LMG +V RKE I+ A V NLD
Sbjct: 584 MNPETRTLLQVTVEDAAIADEVFSMLMGDKVAPRKEFIEENARFVRNLD 632
>gi|145577975|gb|ABP82706.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar entomocidus]
Length = 632
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E +RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKVRYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++ A EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQGAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|414154088|ref|ZP_11410408.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454273|emb|CCO08312.1| DNA gyrase subunit B [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 638
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/532 (49%), Positives = 362/532 (68%), Gaps = 18/532 (3%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE L V + R+G Y Q+++RG P T L + GT++ F
Sbjct: 119 LHGVGVSVVNALSEILSVEIKRNGHIYRQEFARGIPTTELKI----IGKSKSTGTKVTFK 174
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F + F T+ RIRELA+LN + I L+ E DP Q + F GG++++V
Sbjct: 175 PDAEIFEELV-FSLETLTQRIRELAYLNKGVKITLKDERKDPPVEQV--FQFEGGIKDFV 231
Query: 145 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 200
+ LN K+ LH + G R+ V ++ ALQ+ +D Y++TML YAN+I T+DGGTH
Sbjct: 232 KHLNKTKQVLHPKPIYISGEREQV---IVEAALQY-NDGYTETMLSYANNIHTVDGGTHE 287
Query: 201 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 260
G+K +LTR +N G+ +K+ D +L+GE +REG T +ISV+VP P+FEGQTKT+LGN
Sbjct: 288 IGLKTALTRVVNDYGRNHNILKNNDANLTGEDIREGATIVISVKVPEPQFEGQTKTKLGN 347
Query: 261 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 320
EVR +V+ E + +L+ +P V I+ K+++A + AA++AR+L R+KS L + S
Sbjct: 348 SEVRGIVESIFAEKFSTFLDENPSVAKKIIEKAVTAARVREAARKARELTRRKSALETMS 407
Query: 321 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 380
LPGKLADCS P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKI+NVE+ +
Sbjct: 408 LPGKLADCSEKDPSISELYLVEGDSAGGSAKQGRDRRFQAILPLRGKIINVEKARMDKIL 467
Query: 381 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 440
NEEI+ +I ALG G+ GEDF RYHKIII+TDADVDGAHIRTLL+TFFYR+ + L
Sbjct: 468 ANEEIRAMITALGTGI-GEDFDLNKARYHKIIIMTDADVDGAHIRTLLMTFFYRHMRPLI 526
Query: 441 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 500
+ G +YV PPL++V +G Y Y + EL+++ + + +IQR+KGLGEM P QLW
Sbjct: 527 EAGYLYVAQPPLFRVRKGNLDSYVYSEKELEELLKRIGHDKV-NIQRYKGLGEMNPEQLW 585
Query: 501 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
ETT++P+ R + Q+ ++DA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 586 ETTMDPDTRTMLQVTLQDAIEADATFSMLMGDRVEPRRDFIQENARYVRNLD 637
>gi|222093779|ref|YP_002527826.1| DNA gyrase subunit b [Bacillus cereus Q1]
gi|221237824|gb|ACM10534.1| DNA gyrase, B subunit [Bacillus cereus Q1]
Length = 640
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 378/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 98 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 156 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 212 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 266 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 326 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 386 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 446 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+
Sbjct: 505 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILDEL 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 565 PAQPKPGIQRYKGLGEMNPAQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 624
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 625 RNFIQENAKYVKNLD 639
>gi|134297887|ref|YP_001111383.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
gi|134050587|gb|ABO48558.1| DNA gyrase subunit B [Desulfotomaculum reducens MI-1]
Length = 638
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/529 (50%), Positives = 369/529 (69%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS+ L V + R+G Y Q+YSRG P T L V + GT++ F
Sbjct: 119 LHGVGVSVVNALSKYLSVEIKRNGKIYKQEYSRGIPTTELQI----VGNSKTTGTKVTFK 174
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD+++F + F T++ RIRELA+LN + I L+ + DP Q +Y GG++++V
Sbjct: 175 PDEEIFEELV-FSLETLSQRIRELAYLNKGIKIILQDKRKDPVAEQIFQY--DGGIKDFV 231
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K+ +H + + + I +++A+Q+ +D Y++ ML YAN+I T+DGGTH G+
Sbjct: 232 KHLNRNKQTIHTKPIYVSGEKEQIVVEVAIQY-NDGYTENMLSYANNIHTVDGGTHEVGL 290
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N G++ +K+ D +LSGE +REG T +ISV+VP P+FEGQTKT+LGN EV
Sbjct: 291 KTALTRVINDYGRQHGVLKNNDANLSGEDIREGATIVISVKVPEPQFEGQTKTKLGNSEV 350
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD E L+ YL +P V I+ K ++A +A AA++AR+L R+KS L + SLPG
Sbjct: 351 RGIVDSIFAEKLSTYLVENPSVAKKIIEKGITAARAREAARKARELTRRKSALETMSLPG 410
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCS P SEI++VEGDSAGGSAKQGR+RRFQAILPL+GKILNVE+ + NE
Sbjct: 411 KLADCSEKDPSVSEIYLVEGDSAGGSAKQGRERRFQAILPLKGKILNVEKARMDKILANE 470
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I A+G G+ GEDF RYHKI+I+TDADVDGAHIRTLL+TFFYRY + L + G
Sbjct: 471 EIRAMITAMGTGI-GEDFDIAKARYHKIVIMTDADVDGAHIRTLLMTFFYRYMRQLIEAG 529
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
++V PPLY+V +GK YCY D EL+++ + + + +IQR+KGLGEM P QLWETT
Sbjct: 530 YVFVAQPPLYRVRKGKHDSYCYSDNELEELLNRIGHDRV-NIQRYKGLGEMNPEQLWETT 588
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
++P+ R + Q+ +EDA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 589 MDPDTRTMLQVTLEDAIEADATFSMLMGDRVEPRRDFIQENAKYVRNLD 637
>gi|429726067|ref|ZP_19260877.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
gi|429148108|gb|EKX91121.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 473 str. F0040]
Length = 661
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/571 (47%), Positives = 379/571 (66%), Gaps = 28/571 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+YS GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQEYSAGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V DR+GTR +FWPD ++FTT + ++ +A R+RELAFLN LTI L
Sbjct: 156 LYDVKV----VGQTDRRGTRQQFWPDPEIFTTTT-YRYDILANRMRELAFLNAGLTITLT 210
Query: 121 KE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
E + D +E F++ GL E+V++ ++ + PL DV+ + +GI +++A+ + +
Sbjct: 211 DEREIDENGKPLSETFYSEQGLREFVRYQDSMRNPLIPDVIYINTEKEGIPVEVAIVY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTVKDKDISLSGEHVRE 235
+YS+ + Y N+I TI+GGTH+ G ++++TR L +++ K ++ I ++GE RE
Sbjct: 270 TSYSENLHSYVNNINTIEGGTHLAGFRSAVTRVLKKYAEETAQKQIEKAKIEITGEDFRE 329
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+ K +
Sbjct: 330 GLTAVISVKVAEPQFEGQTKTKLGNSEVMGAVNQAVGEALTYYLEEHPKEAKLIVDKVIL 389
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A A +AA++AR+ V++K+ + LPGKLADCSS PEE E+F+VEGDSAGGSAKQGR
Sbjct: 390 AATARVAARKARETVQRKNPMSGGGLPGKLADCSSKVPEECELFLVEGDSAGGSAKQGRS 449
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL-------GVKGEDFKKEA--- 405
R QAILPLRGKILNVE+ ++++E+ N+I+ALG+ G GE KEA
Sbjct: 450 RATQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVQKEGETGEVDSKEANID 509
Query: 406 -LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYC 464
LRYHKI+I+ DADVDG HI TL++T FYRY + E +Y+ +PPLY+ +GK +YC
Sbjct: 510 KLRYHKIVIMADADVDGQHIATLIMTLFYRYFPQVIRENHLYIAMPPLYRCRKGKTEEYC 569
Query: 465 YDDAELKKVKSSF--PSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 520
Y+D E + P+ SI QR+KGLGEM P QLW+TT+NPE RMLK + IE+AA
Sbjct: 570 YNDREKDAFIEKYGDPTKGENSITLQRYKGLGEMNPTQLWDTTMNPETRMLKLVTIENAA 629
Query: 521 EANVVFSSLMGARVDTRKELIQNAANLVNLD 551
EA+ +FS LMG V+ R++ I+ A +D
Sbjct: 630 EADHIFSMLMGDDVEPRRDFIERNAKYATID 660
>gi|418312245|ref|ZP_12923755.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
gi|365238593|gb|EHM79425.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21334]
Length = 644
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 374/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ + YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNEIIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIKITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNANQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|304315545|ref|YP_003850690.1| DNA gyrase subunit beta [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777047|gb|ADL67606.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 633
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/551 (48%), Positives = 380/551 (68%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF ++ Y VSGGLHGVGLSVVNALS+ LEV V ++G Y QKY RG P +
Sbjct: 96 LTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKRLEVIVKQNGKVYEQKYERGVPKS 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + D GT I F PD ++F T +++D++ ++ R+REL+FLN + I L E
Sbjct: 154 DLKI----IGDTDETGTTITFAPDDEIFET-LEYDYDILSQRLRELSFLNKGVRIRLMDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
E + + + GG+ E+V++LN +K+ LH + + D +++A+Q+ +D+Y+
Sbjct: 209 RDGKE----DVFHYEGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVAMQY-NDSYT 263
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD D +L GE VREGLT II
Sbjct: 264 ENIFSFANNIDTREGGTHLIGFKAALTKVINDYARKFNIIKDNDKNLQGEDVREGLTAII 323
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K+ SA +A
Sbjct: 324 SVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEKATSAARARE 383
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK GRD R+QAI
Sbjct: 384 AARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKMGRDSRYQAI 443
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++I+TDADVDG
Sbjct: 444 LPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVVIMTDADVDG 502
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+E+ K+V Y Y D EL +
Sbjct: 503 SHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKIEKNKKVYYAYSDKELDNILKEIGREN 562
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QR+KGLGEM QLW+TT++PE+R + ++ ++DA A+ +F+ LMG +V+ R+E I
Sbjct: 563 -YNVQRYKGLGEMDAEQLWDTTMDPEKRTMLKVSLDDAIAADEIFTILMGDKVEPRREFI 621
Query: 542 QNAANLV-NLD 551
+ A V NLD
Sbjct: 622 EKYAKTVRNLD 632
>gi|145577985|gb|ABP82711.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar thompsoni]
Length = 632
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/555 (50%), Positives = 378/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++L + +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLSY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|242372598|ref|ZP_04818172.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
gi|242349653|gb|EES41254.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1]
Length = 643
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 371/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V+R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVYRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF D +FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EIGETDQTGTAIRFKADGDIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E E+ + + Y + GG++ YV+ LN +K+P+H + + + D I +++A+Q+ S
Sbjct: 215 DERE--EEVREDSYHYEGGIKSYVELLNENKEPIHQEPIYIHQTKDDIEVEIAIQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G +SK +K+ LSGE REGLT
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGTQSKIIKEDKDRLSGEDTREGLTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V I+ K + A +A
Sbjct: 332 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPSVGRIIVEKGIMASRA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L SSLPGKLADCSS P+ESEIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVSSLPGKLADCSSKNPDESEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ GE F RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGE-FDISKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ +EDA +A+ F LMG V+ R++
Sbjct: 571 TPKWSISRYKGLGEMNADQLWETTMNPEHRSMLQVRLEDAIDADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|433443705|ref|ZP_20408961.1| DNA gyrase, B subunit [Anoxybacillus flavithermus TNO-09.006]
gi|432001978|gb|ELK22841.1| DNA gyrase, B subunit [Anoxybacillus flavithermus TNO-09.006]
Length = 637
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/554 (51%), Positives = 380/554 (68%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG ++QK P
Sbjct: 95 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEELEVYVHRDGNIHYQK-----P 147
Query: 61 VTTLTCHVLPV-DSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ + C L V DR GT I F PD ++FT ++D++T+A R+RELAFLN + I L
Sbjct: 148 IPCVPCSDLQVVGETDRTGTMIHFKPDPEIFTETTEYDYDTLAHRLRELAFLNKGIRITL 207
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
ED EK + NEY++ GG+ YV+ LN K+ LH+ + + DGI +++ALQ+ +D
Sbjct: 208 --EDRRGEKRR-NEYYYEGGISSYVKHLNRTKETLHEEPIYIEGEKDGIQVEIALQY-ND 263
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y+ + +AN+I T +GGTH G K +LTR +N G+K+ K++D +L+GE VREGLT
Sbjct: 264 GYTSNIYSFANNIHTHEGGTHELGFKTALTRIINDYGRKNNMFKEQDANLTGEDVREGLT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV+ P P+FEGQTKT+LGN + R + E ++L +P V I+ K + A +
Sbjct: 324 AIISVKHPAPQFEGQTKTKLGNSDARTATESIFAEQFEKFLLENPSVAKKIVEKGILASR 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAAKRAR+L R+K+ L SSLPGKLADCSS P E+++VEGDSAGGSAKQGRDR F
Sbjct: 384 ARLAAKRARELTRRKNALEVSSLPGKLADCSSRDPAICELYVVEGDSAGGSAKQGRDRHF 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RYHKIII+TDAD
Sbjct: 444 QAILPLRGKIINVEKSRLDKILSNNEVRAIITALGTGI-GEDFDITKARYHKIIIMTDAD 502
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYK+++GK+++Y Y D +L+++ + P
Sbjct: 503 VDGAHIRTLLLTFFYRYMREVIEQGYVYIAQPPLYKIQQGKRIEYAYSDRQLEEILTRLP 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
IQR+KGLGEM P QLWETT+NPE R L ++ ++DA EA+ F LMG +V+ R+
Sbjct: 563 EQPKPVIQRYKGLGEMNPEQLWETTMNPETRTLLKVSLQDAMEADETFEILMGDKVEPRR 622
Query: 539 ELI-QNAANLVNLD 551
+ I +NA + NLD
Sbjct: 623 QFIEENAKYVKNLD 636
>gi|390933679|ref|YP_006391184.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569180|gb|AFK85585.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 633
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/551 (48%), Positives = 379/551 (68%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF ++ Y VSGGLHGVGLSVVNALS+ LEV V ++G Y QKY RG P T
Sbjct: 96 LTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKKLEVIVKQNGKVYQQKYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
LT + D GT I F PD ++F T +++D++ ++ R+REL+FLN + I L E
Sbjct: 154 DLTV----IGETDETGTTITFSPDGEIFET-LEYDYDVLSQRLRELSFLNKGVKIRLVDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
E + + + GG+ E+V++LN +K+ LH + + D +++A+Q+ +D Y+
Sbjct: 209 RDGKE----DVFHYEGGVVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVAMQY-NDTYT 263
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + +AN+I T +GGTH+ G K +LT+ +N +K +K+ D +L GE VREGLT II
Sbjct: 264 ENIFSFANNIDTREGGTHLIGFKTALTKVINDYARKFNIIKENDKNLQGEDVREGLTAII 323
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K+ SA +A
Sbjct: 324 SVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEKATSAARARE 383
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK GRD R+QAI
Sbjct: 384 AARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKMGRDSRYQAI 443
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++I+TDADVDG
Sbjct: 444 LPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVVIMTDADVDG 502
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFFYR+ + L + G IY+ PPLYK+E+ K+V Y Y D EL +
Sbjct: 503 SHIRTLLLTFFYRFMRPLIENGNIYIAQPPLYKIEKNKKVYYAYSDKELDNILKEIGREN 562
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QR+KGLGEM QLW+TT++PE+R + ++ ++DA A+ +F+ LMG +V+ R+E I
Sbjct: 563 -YNVQRYKGLGEMDAEQLWDTTMDPEKRTMLKVSLDDAIAADEIFTILMGDKVEPRREFI 621
Query: 542 QNAANLV-NLD 551
+ A V NLD
Sbjct: 622 EKYAKTVRNLD 632
>gi|190710609|gb|ACE95135.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni]
Length = 627
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+ T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNTHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|224024595|ref|ZP_03642961.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
gi|224017817|gb|EEF75829.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM
18228]
Length = 656
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/567 (47%), Positives = 369/567 (65%), Gaps = 27/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q+Y GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTNVFRGGKVYQQEYECGKP 157
Query: 61 VTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 116
+ + TC + GTR FWPD +FT ++ ++ + R+RELA+LN +T
Sbjct: 158 LYPVKEVGTC------APGMTGTRQTFWPDGNIFTVT-EYKYSILQARMRELAYLNKGIT 210
Query: 117 IALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLAL 173
I L + E + + F G++E+V++LN+ PL DV+ + GI I+ A+
Sbjct: 211 ITLTDKRVKEEDGSFKQEVFHSEEGVKEFVRFLNSTNTPLIDDVIYLNTEKQGIPIECAI 270
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ + + + + Y N+I TI+GGTH G + +LTR L ++SK ++ + +SGE
Sbjct: 271 MY-NTGFRENLHSYVNNINTIEGGTHEAGFRTALTRVLKKYAEESKALEKAKVEISGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+ K
Sbjct: 330 REGLIAVISVKVAEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKVIVDKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++KS + LPGKLADCSS PEE E+F+VEGDSAGGSAKQG
Sbjct: 390 VLAATARIAARKARESVQRKSPMGGGGLPGKLADCSSRNPEECELFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKEA----LR 407
R R+FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV G++ K+A LR
Sbjct: 450 RSRQFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGDEDSKKANIDKLR 509
Query: 408 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 467
Y+KIII+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YCY D
Sbjct: 510 YYKIIIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIATPPLYKCSKGKISEYCYTD 569
Query: 468 AELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
E + + N +++ QR+KGLGEM P QLWETT+NPE RMLKQ+ IE+AAEA+
Sbjct: 570 EERQAFMQKYGDGSENGIHT-QRYKGLGEMNPEQLWETTMNPETRMLKQVHIENAAEADY 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVAPRREFIEKNATYANID 655
>gi|333895870|ref|YP_004469744.1| DNA topoisomerase IV subunit B [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111135|gb|AEF16072.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 633
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/551 (48%), Positives = 381/551 (69%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF ++ Y VSGGLHGVGLSVVNALS++LEV V ++G Y QKY RG P T
Sbjct: 96 LTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKNLEVIVKQNGKVYQQKYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
LT + D GT I F PD ++F T +++D++ ++ R+REL+FLN + I L E
Sbjct: 154 DLTV----IGETDETGTTITFSPDGEIFET-LEYDYDVLSQRLRELSFLNKGVKIRLVDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
E + + + GG+ E+V++LN +K+ LH + + D +++A+Q+ +D+Y+
Sbjct: 209 RDGKE----DVFHYEGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVAMQY-NDSYT 263
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + +AN+I T +GGTH+ G K +LT+ +N +K +K+ D +L GE VREGLT II
Sbjct: 264 ENIFSFANNIDTREGGTHLIGFKTALTKVINDYARKFNIIKENDKNLQGEDVREGLTAII 323
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K+ SA +A
Sbjct: 324 SVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEKATSAARARE 383
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK GRD ++QAI
Sbjct: 384 AARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKMGRDSKYQAI 443
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++I+TDADVDG
Sbjct: 444 LPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVVIMTDADVDG 502
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFFYR+ + L + G IY+ PPLYK+E+ K+V Y Y D EL +
Sbjct: 503 SHIRTLLLTFFYRFMRPLIENGNIYIAQPPLYKIEKNKKVYYAYSDKELDNILKEIGREN 562
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QR+KGLGEM QLW+TT++PE+R + ++ ++DA A+ +F+ LMG +V+ R+E I
Sbjct: 563 -YNVQRYKGLGEMDAEQLWDTTMDPEKRTMLKVSLDDAIAADEIFTILMGDKVEPRREFI 621
Query: 542 QNAANLV-NLD 551
+ A V NLD
Sbjct: 622 EKYAKTVRNLD 632
>gi|418905552|ref|ZP_13459579.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764852|gb|EHT88702.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 644
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHDDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|148266452|ref|YP_001245395.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|150392485|ref|YP_001315160.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH1]
gi|418876920|ref|ZP_13431162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
gi|147739521|gb|ABQ47819.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9]
gi|149944937|gb|ABR50873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH1]
gi|377699237|gb|EHT23584.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1165]
Length = 640
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 155 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 211 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 269 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 329 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|57651113|ref|YP_184916.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL]
gi|81859679|sp|Q5HJZ1.3|GYRB_STAAC RecName: Full=DNA gyrase subunit B
gi|57285299|gb|AAW37393.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL]
Length = 644
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|49484917|ref|YP_042138.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|386829730|ref|YP_006236384.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|49243360|emb|CAG41777.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476]
gi|385195122|emb|CCG14722.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 643
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 100 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 158 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 214 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 332 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 571 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|340751288|ref|ZP_08688109.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
gi|229421601|gb|EEO36648.1| DNA gyrase, B subunit [Fusobacterium mortiferum ATCC 9817]
Length = 635
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/554 (48%), Positives = 372/554 (67%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALS EV V ++G ++QKY+RG P
Sbjct: 92 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSLWTEVEVRKNGKVWYQKYNRGIP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + GT +RF D ++F T + +D+NT+ R++ELA+LN L I L
Sbjct: 150 EEA----VKEIGITEEHGTTVRFKADHEIFETLV-YDYNTLKNRLKELAYLNKGLVITLT 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-KKPLHDVVGFRKDVDGITIDLALQWCSDA 179
+P K + E F GG+ ++++ + D +K + + + +VD I +++A + +
Sbjct: 205 DSRKEPFKKEIFE--FEGGIADFLREITEDTEKLIKEPIYMTGEVDNIGVEIAFLYTVNQ 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
S+ + + N+I T +GGTH++G + +LTR +N +GK +KDKD L G +REG+T
Sbjct: 263 -SEIIYSFVNNINTHEGGTHVQGFRTALTRIINDVGKAQGLLKDKDGKLQGTDIREGVTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+VP P+FEGQTKT+LGN EV +V V L LE +P+ I+ K L++ KA
Sbjct: 322 IVSVKVPQPQFEGQTKTKLGNSEVTGIVSTVVGGQLKMILEDNPNDTKVIIEKILNSKKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+LV +KS L SLPGKLADCSS PEE EI+IVEGDSAGGSAKQGRDR Q
Sbjct: 382 REAAQRARELVLRKSALEVGSLPGKLADCSSKNPEECEIYIVEGDSAGGSAKQGRDRYHQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +N E++ +I A G G+ G++F E LRY KII++TDADV
Sbjct: 442 AILPLRGKILNVEKAGLHKALENNEVRAMITAFGTGI-GDNFNIEKLRYGKIILMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YRY L G +++ PPLYK+ GKQ++Y Y D ELK++ +F
Sbjct: 501 DGAHIRTLLLTFIYRYMIELIYNGNVFIAQPPLYKISYGKQIKYAYSDRELKEITEAFEG 560
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y++QR+KGLGEM P QLWETT++P+ R L ++ I+DA A+++F LMG +VD R+
Sbjct: 561 EDKKYTLQRYKGLGEMNPEQLWETTMDPQNRTLLKVTIDDARAADMLFDKLMGDKVDPRR 620
Query: 539 ELI-QNAANLVNLD 551
E I +NA + NLD
Sbjct: 621 EFIEENAEYVKNLD 634
>gi|438000917|ref|YP_007270660.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|432177711|emb|CCP24684.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
Length = 640
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/552 (49%), Positives = 379/552 (68%), Gaps = 16/552 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF +S GY VSGGLHGVG+SVVNALS +EV V RDG ++QKY RGKPVT
Sbjct: 101 LTMLHAGGKF--NSGGYKVSGGLHGVGVSVVNALSSWMEVEVKRDGGIFYQKYERGKPVT 158
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
V+ + GT+I F PD ++F + F + + R+RE AFLN + I L
Sbjct: 159 ----DVIRKGDTEETGTKITFMPDNEIFEDTV-FSQDILTQRLREQAFLNRGIRIEL--- 210
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYS 181
D N + + GG+ +V++LN + LH+ + D + +++A+Q+ +D+Y
Sbjct: 211 -FDERTGNSNVFHYEGGIVSFVKYLNRKRDVLHEKPIYMSAARDDMEVEVAMQY-NDSYL 268
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+T+L +AN+I T +GGTH+ G + +LTR++N +K +K++D +LSGE VREGLT +I
Sbjct: 269 ETVLTFANNINTHEGGTHLSGFRTALTRSMNDYMRKMNLLKEQDANLSGEDVREGLTAVI 328
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ NP+FEGQTKT+LGN E+R +VD V E ++ +LE +P + I+ K+L A +A
Sbjct: 329 SVKLTNPQFEGQTKTKLGNSEIRSLVDTVVGEGISRFLEENPAIARVIVEKALGAARARE 388
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+K+ L ++LPGKLADC P E+++VEGDSAGGSAKQGRD + QAI
Sbjct: 389 AARKARELTRRKTALEHTTLPGKLADCRERDPRLCELYLVEGDSAGGSAKQGRDPQIQAI 448
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + NEEI+++I ALG G+ GE+F E LRYHKII++ DADVDG
Sbjct: 449 LPLRGKILNVEKARMDKILNNEEIRSMITALGTGI-GEEFDIEKLRYHKIILMADADVDG 507
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSN 480
AHIRTLLLTFFYRY + L + G IY+ PPLY+V GK+ Y +DD EL K+ S S
Sbjct: 508 AHIRTLLLTFFYRYMQPLIEAGKIYIAQPPLYRVVLGKKDYYAFDDLELSKILESLGNSR 567
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
I+RFKGLGEM QLWETT+NPE R + ++ +EDA A+ +F+ LMG +V+ R++
Sbjct: 568 ERAEIKRFKGLGEMAAEQLWETTMNPETRTILKVSLEDAVAADEIFTILMGDKVEPRRQF 627
Query: 541 I-QNAANLVNLD 551
I ++AA + NLD
Sbjct: 628 IFEHAAEVQNLD 639
>gi|307243405|ref|ZP_07525562.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
gi|306493215|gb|EFM65211.1| DNA gyrase, B subunit [Peptostreptococcus stomatis DSM 17678]
Length = 635
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/552 (50%), Positives = 373/552 (67%), Gaps = 13/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALS+ L V RDG Y Q+Y RG P
Sbjct: 94 VLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSDWLVAEVSRDGKVYRQEYKRGVPT 151
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L V+ SKD GT I F PD +F I+F + T+ R REL+FLN + I
Sbjct: 152 GKL--EVVSESSKD-SGTSITFMPDASIFD-EIEFKYETLEYRFRELSFLNKVIKIEF-- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
ED + + + + GGL EY+++LN K P+HD ++ K + TI+LALQ+ +DAY
Sbjct: 206 EDKREGQEESKTFHYTGGLVEYIKYLNRTKTPIHDQIIYVDKIANDCTIELALQY-TDAY 264
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GG H+ G KA+LT+ +N +++ +K+KD +LSGE +REGLT I
Sbjct: 265 TENIYSFANNINTHEGGVHLSGFKAALTKCVNDYARRNNILKEKDPNLSGEDIREGLTAI 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++P+P+FEGQTKT+LGN +R +VD E + +LE +P V ++ K L A +A
Sbjct: 325 VSVKLPDPQFEGQTKTKLGNTFMRGLVDSIANEEIGAFLEENPSVAKLVIEKCLRAQRAR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+ARDL R+K+ L +SLPGKLADCS +PE+SEIF+VEGDSAGGSAK GRDR QA
Sbjct: 385 EAAKKARDLTRRKNALEFTSLPGKLADCSEKSPEKSEIFLVEGDSAGGSAKSGRDRNIQA 444
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + +EEI+N+I A G G+ GEDF+ E LRYHKI+I+TDADVD
Sbjct: 445 ILPLRGKILNVEKSRLDKILSSEEIKNMITAFGCGI-GEDFEPEKLRYHKIVIMTDADVD 503
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY + L + G +Y PPL+KV++GK+ Y + D EL +
Sbjct: 504 GAHIRTLLLTFFFRYMRPLIEGGYVYAAQPPLFKVKKGKKEYYAFSDNELSSLLDEVGRQ 563
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ R+KGLGEM QLWETT++PE R L Q+ I+DA A+ +FS LMG +V R++
Sbjct: 564 GA-DVSRYKGLGEMNAEQLWETTMDPESRTLLQVTIDDAIMADEIFSMLMGDKVAPRRDF 622
Query: 541 IQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 623 IEANAKYVTNLD 634
>gi|198274299|ref|ZP_03206831.1| hypothetical protein BACPLE_00442 [Bacteroides plebeius DSM 17135]
gi|198272789|gb|EDY97058.1| DNA gyrase, B subunit [Bacteroides plebeius DSM 17135]
Length = 654
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/562 (47%), Positives = 366/562 (65%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTNVFRNGKIYQQEYECGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V + D GTR FWPD +FT ++ ++ + R+RELA+LN +TI L
Sbjct: 158 LYA----VKEVGTTDITGTRQTFWPDGSIFTVT-EYKYSILQARMRELAYLNKGITITLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E Y + F G++E+V++LN++ PL DV+ + GI I+ A+ + +
Sbjct: 213 DKRVKEEDGSYKQEKFHSEEGVKEFVRFLNSNNTPLIDDVIYLNTEKQGIPIECAIMY-N 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ + + Y N+I TI+GGTH G + +LTR L ++SK ++ + +SGE REGL
Sbjct: 272 TGFRENLHSYVNNINTIEGGTHEAGFRMALTRVLKKYAEESKALEKAKVEISGEDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
+ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+ K + A
Sbjct: 332 IAVISVKVSEPQFEGQTKTKLGNNEVSGAVNQAVGEALTYYLEEHPKEAKIIVDKVVLAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A +AA++AR+ V++KS + LPGKLADCSS EE E+F+VEGDSAGGSAKQGR R+
Sbjct: 392 TARVAARKARESVQRKSPMGGGGLPGKLADCSSRVAEECELFLVEGDSAGGSAKQGRSRQ 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKEA----LRYHKI 411
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GE+ K+A LRYHK+
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGVRFGVDGEEDSKKANIDKLRYHKV 511
Query: 412 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 471
II+TDADVDG+HI TL++T FYRY + G +Y+ PPLYK +GK +YCY D +
Sbjct: 512 IIMTDADVDGSHIDTLIMTLFYRYMPEVIQGGHLYIATPPLYKCSKGKISEYCYTDEARQ 571
Query: 472 KVKSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+ I QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA+ +FS L
Sbjct: 572 AFIQKYGEGNEQGIHTQRYKGLGEMNPEQLWETTMNPETRILKQVNIENAAEADYIFSML 631
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A N+D
Sbjct: 632 MGDDVGPRREFIEKNATYANID 653
>gi|190710559|gb|ACE95110.1| gyrase subunit B [Bacillus thuringiensis serovar nigeriensis]
Length = 627
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADEAFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|15922995|ref|NP_370529.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|15925710|ref|NP_373243.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|156978336|ref|YP_001440595.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253316843|ref|ZP_04840056.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253730404|ref|ZP_04864569.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|254663939|ref|ZP_05143411.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793543|ref|ZP_05642522.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|258411151|ref|ZP_05681430.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|258420945|ref|ZP_05683879.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|258438584|ref|ZP_05689807.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|258443960|ref|ZP_05692298.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|258446224|ref|ZP_05694384.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|258449117|ref|ZP_05697223.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|258454405|ref|ZP_05702373.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|269201695|ref|YP_003280964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282894284|ref|ZP_06302514.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|282927755|ref|ZP_06335369.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|295406869|ref|ZP_06816673.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|296275682|ref|ZP_06858189.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MR1]
gi|297245904|ref|ZP_06929766.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|384863401|ref|YP_005748760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|385780303|ref|YP_005756474.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 11819-97]
gi|387149193|ref|YP_005740757.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|415693122|ref|ZP_11454976.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|417652015|ref|ZP_12301771.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|417654048|ref|ZP_12303776.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|417796905|ref|ZP_12444107.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|417801536|ref|ZP_12448624.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|417893975|ref|ZP_12537998.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|417900702|ref|ZP_12544581.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|418314813|ref|ZP_12926279.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|418322452|ref|ZP_12933785.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|418425904|ref|ZP_12998981.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|418428781|ref|ZP_13001761.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|418431669|ref|ZP_13004559.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|418435581|ref|ZP_13007421.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|418438336|ref|ZP_13010107.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|418441285|ref|ZP_13012958.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|418441566|ref|ZP_13013193.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|418447232|ref|ZP_13018689.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|418450330|ref|ZP_13021698.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|418453178|ref|ZP_13024493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|418456115|ref|ZP_13027361.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|418458991|ref|ZP_13030176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567448|ref|ZP_13131812.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|418573938|ref|ZP_13138118.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|418598564|ref|ZP_13162073.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|418640046|ref|ZP_13202282.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|418644043|ref|ZP_13206195.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|418653186|ref|ZP_13215131.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|418661955|ref|ZP_13223515.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|418874096|ref|ZP_13428368.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|418879712|ref|ZP_13433935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|418882673|ref|ZP_13436877.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885320|ref|ZP_13439476.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|418893491|ref|ZP_13447596.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913293|ref|ZP_13467267.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418918779|ref|ZP_13472728.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|418930156|ref|ZP_13484008.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|418989922|ref|ZP_13537586.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|419783663|ref|ZP_14309446.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|421148834|ref|ZP_15608493.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424769522|ref|ZP_18196748.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|443636287|ref|ZP_21120402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443638069|ref|ZP_21122126.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
gi|54037243|sp|P66937.2|GYRB_STAAN RecName: Full=DNA gyrase subunit B
gi|54041556|sp|P66936.2|GYRB_STAAM RecName: Full=DNA gyrase subunit B
gi|13699922|dbj|BAB41221.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315]
gi|14245772|dbj|BAB56167.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50]
gi|156720471|dbj|BAF76888.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3]
gi|253725884|gb|EES94613.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257787515|gb|EEV25855.1| DNA gyrase, B subunit [Staphylococcus aureus A9781]
gi|257840036|gb|EEV64501.1| DNA gyrase subunit B [Staphylococcus aureus A9763]
gi|257843135|gb|EEV67550.1| DNA gyrase, B subunit [Staphylococcus aureus A9719]
gi|257848143|gb|EEV72135.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299]
gi|257850844|gb|EEV74788.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115]
gi|257855050|gb|EEV77993.1| DNA gyrase, B subunit [Staphylococcus aureus A6300]
gi|257857550|gb|EEV80445.1| DNA gyrase, B subunit [Staphylococcus aureus A6224]
gi|257863499|gb|EEV86259.1| DNA gyrase, B subunit [Staphylococcus aureus A5937]
gi|262073985|gb|ACY09958.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98]
gi|282590515|gb|EFB95593.1| DNA gyrase, B subunit [Staphylococcus aureus A10102]
gi|282763329|gb|EFC03459.1| DNA gyrase, B subunit [Staphylococcus aureus A8117]
gi|285815732|gb|ADC36219.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981]
gi|294968334|gb|EFG44359.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819]
gi|297177269|gb|EFH36522.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796]
gi|312828568|emb|CBX33410.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129548|gb|EFT85540.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03]
gi|329725845|gb|EGG62324.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172]
gi|329732607|gb|EGG68957.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193]
gi|334267943|gb|EGL86394.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21305]
gi|334276580|gb|EGL94834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21318]
gi|341847016|gb|EGS88202.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21266]
gi|341853482|gb|EGS94363.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21201]
gi|364521292|gb|AEW64042.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
11819-97]
gi|365223481|gb|EHM64770.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus VCU006]
gi|365244416|gb|EHM85075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21340]
gi|371980639|gb|EHO97841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21333]
gi|371982093|gb|EHO99253.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21272]
gi|374399341|gb|EHQ70482.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21343]
gi|375015446|gb|EHS09101.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-3]
gi|375019491|gb|EHS13044.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-99]
gi|375027023|gb|EHS20400.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-55]
gi|375037444|gb|EHS30478.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-122]
gi|377701338|gb|EHT25671.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1057]
gi|377718582|gb|EHT42754.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1769]
gi|377719156|gb|EHT43327.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1750]
gi|377726373|gb|EHT50485.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1096]
gi|377729262|gb|EHT53358.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1150]
gi|377734873|gb|EHT58910.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1213]
gi|377759336|gb|EHT83217.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769065|gb|EHT92843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC348]
gi|377773604|gb|EHT97349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC93]
gi|383364751|gb|EID42057.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-M]
gi|387714926|gb|EIK03037.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS1]
gi|387715095|gb|EIK03201.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS3a]
gi|387715280|gb|EIK03383.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS2]
gi|387722714|gb|EIK10500.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS4]
gi|387724428|gb|EIK12085.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS5]
gi|387726669|gb|EIK14217.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS6]
gi|387732608|gb|EIK19823.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS8]
gi|387733965|gb|EIK21123.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS9]
gi|387740837|gb|EIK27760.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS7]
gi|387741252|gb|EIK28109.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS10]
gi|387741729|gb|EIK28562.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11a]
gi|387742964|gb|EIK29766.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VRS11b]
gi|394330936|gb|EJE57024.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402348167|gb|EJU83162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CM05]
gi|408422576|emb|CCJ09987.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408424564|emb|CCJ11951.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408426553|emb|CCJ13916.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408428541|emb|CCJ25706.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408430530|emb|CCJ17845.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408432523|emb|CCJ19808.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408434512|emb|CCJ21772.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|408436497|emb|CCJ23740.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ST228]
gi|443408203|gb|ELS66731.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21236]
gi|443410042|gb|ELS68521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21196]
Length = 644
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|348025743|ref|YP_004765548.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
gi|341821797|emb|CCC72721.1| DNA gyrase subunit B [Megasphaera elsdenii DSM 20460]
Length = 639
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/557 (48%), Positives = 386/557 (69%), Gaps = 18/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY +SGGLHGVG+SVVNALS +V V RDG + ++RG
Sbjct: 94 VVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSVWTKVQVKRDGYLWGISFTRGVT 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + P+++ + GT++ F PD ++F + +D NT+ R+RELAFLN L I L
Sbjct: 152 DEPLR-KIRPLEAGEETGTKVSFKPDHEIFPDTV-YDFNTLKTRLRELAFLNKGLHITLT 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG----ITIDLALQWC 176
+ + + Y + GGL +V++LN + ++ + +VDG + +D+A+Q+
Sbjct: 210 DKRGE---GKSEVYCYEGGLTSFVEFLNQSHQAVNPTI---INVDGEKNKVIVDIAMQY- 262
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D YS+ +L + N I T +GGTH+ G ++ LTRT+N G+ + +K+ + +LSGE VREG
Sbjct: 263 NDGYSENILTFVNDIFTEEGGTHLSGFRSGLTRTINDYGRSAGIIKENEDNLSGEDVREG 322
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+V P+FEGQTKT+LGN EV+ +VD + + L E+ E HP +I++K++SA
Sbjct: 323 LTAVISVKVREPQFEGQTKTKLGNSEVKGIVDNIISDGLKEFFEEHPSEAKAIITKTISA 382
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA+RAR+L R+K+ L SSLPGKLADCS P+++EI++VEGDSAGGSAKQGRDR
Sbjct: 383 SRARQAARRARELTRRKNALEISSLPGKLADCSEKNPDQTEIYLVEGDSAGGSAKQGRDR 442
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKI+NVE+ + N+EI+++I A G G+ G++F RY KIII+TD
Sbjct: 443 RFQAILPLRGKIINVEKARLDKILANDEIRSMITAFGTGI-GQEFDLSKRRYDKIIIMTD 501
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVKS 475
ADVDGAHIRTLLLTFFYR+ K L +G +Y+ PPLY+V +GKQV Y Y D ++ K+
Sbjct: 502 ADVDGAHIRTLLLTFFYRFMKPLITDGHVYIAQPPLYQVRKGKQVWYFYTDESMQAKLDE 561
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
N +QR+KGLGEM P QLWETT++PE R + ++ +EDAAEA+ +FS LMG +V+
Sbjct: 562 LGRDNNSVVVQRYKGLGEMNPEQLWETTMDPENRTMLKVELEDAAEADRIFSVLMGDKVE 621
Query: 536 TRKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 622 PRRKFIEENAKKVRNLD 638
>gi|145577993|gb|ABP82715.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar alesti]
Length = 632
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/555 (50%), Positives = 376/555 (67%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDKTGTITRFKPDPEIFKETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRD
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDCH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLL TFFYRY + + G IY+ PPL+KV++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLFTFFYRYMGQIIECGYIYIAQPPLFKVQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAANLV-NLD 551
+ IQ A V NLD
Sbjct: 618 RNFIQENAKFVKNLD 632
>gi|190710557|gb|ACE95109.1| gyrase subunit B [Bacillus thuringiensis serovar londrina]
gi|190710571|gb|ACE95116.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710573|gb|ACE95117.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710579|gb|ACE95120.1| gyrase subunit B [Bacillus thuringiensis serovar canadensis]
gi|190710583|gb|ACE95122.1| gyrase subunit B [Bacillus thuringiensis serovar jegathesan]
gi|190710585|gb|ACE95123.1| gyrase subunit B [Bacillus thuringiensis serovar yosoo]
gi|190710593|gb|ACE95127.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki]
gi|190710599|gb|ACE95130.1| gyrase subunit B [Bacillus thuringiensis serovar yunnanensis]
gi|190710603|gb|ACE95132.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
gi|190710607|gb|ACE95134.1| gyrase subunit B [Bacillus thuringiensis serovar kumamotoensis]
gi|190710613|gb|ACE95137.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|190710577|gb|ACE95119.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 276/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|21281734|ref|NP_644820.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87161454|ref|YP_492727.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88193828|ref|YP_498613.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220216|ref|YP_001331039.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161508271|ref|YP_001573930.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253733834|ref|ZP_04867999.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|258451362|ref|ZP_05699393.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|262049437|ref|ZP_06022309.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|262051893|ref|ZP_06024108.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|282902636|ref|ZP_06310529.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|282918073|ref|ZP_06325823.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282920724|ref|ZP_06328443.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282921295|ref|ZP_06329013.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|283767795|ref|ZP_06340710.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|297209447|ref|ZP_06925845.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|300911471|ref|ZP_07128920.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|379013370|ref|YP_005289606.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|379019818|ref|YP_005296480.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|384546274|ref|YP_005735527.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus ED133]
gi|387779222|ref|YP_005754020.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|415687298|ref|ZP_11451225.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|416845644|ref|ZP_11906099.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|417648054|ref|ZP_12297884.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|417799292|ref|ZP_12446436.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|417897325|ref|ZP_12541262.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|417899938|ref|ZP_12543838.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|417905250|ref|ZP_12549062.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|418286939|ref|ZP_12899575.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|418318231|ref|ZP_12929640.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|418561814|ref|ZP_13126292.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|418569364|ref|ZP_13133697.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|418577923|ref|ZP_13142021.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|418596805|ref|ZP_13160353.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|418641274|ref|ZP_13203487.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|418648772|ref|ZP_13210809.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|418650154|ref|ZP_13212176.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|418657144|ref|ZP_13218921.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|418658950|ref|ZP_13220646.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|418902289|ref|ZP_13456333.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|418910550|ref|ZP_13464538.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|418927294|ref|ZP_13481184.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|418933015|ref|ZP_13486841.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|418949662|ref|ZP_13501899.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|418986990|ref|ZP_13534666.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|419773340|ref|ZP_14299349.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|422742288|ref|ZP_16796295.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745337|ref|ZP_16799280.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|440708266|ref|ZP_20888936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|440736072|ref|ZP_20915673.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|448740839|ref|ZP_21722813.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|448744200|ref|ZP_21726100.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
gi|59797750|sp|Q6GD85.3|GYRB_STAAS RecName: Full=DNA gyrase subunit B
gi|59799585|sp|P0A0K7.2|GYRB_STAAW RecName: Full=DNA gyrase subunit B
gi|59799586|sp|P0A0K8.2|GYRB_STAAU RecName: Full=DNA gyrase subunit B
gi|93204588|sp|Q2FKQ1.3|GYRB_STAA3 RecName: Full=DNA gyrase subunit B
gi|296395|emb|CAA50570.1| DNA gyrase [Staphylococcus aureus]
gi|540541|dbj|BAA01369.1| DNA gyrase B [Staphylococcus aureus]
gi|21203169|dbj|BAB93870.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2]
gi|87127428|gb|ABD21942.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201386|gb|ABD29196.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150373016|dbj|BAF66276.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160367080|gb|ABX28051.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|253728137|gb|EES96866.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130]
gi|257860892|gb|EEV83709.1| DNA gyrase, B subunit [Staphylococcus aureus A5948]
gi|259160220|gb|EEW45249.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3]
gi|259162434|gb|EEW47004.1| DNA gyrase subunit B [Staphylococcus aureus D30]
gi|282315710|gb|EFB46094.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427]
gi|282318358|gb|EFB48718.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139]
gi|282594132|gb|EFB99120.1| DNA gyrase, B subunit [Staphylococcus aureus A9765]
gi|282597095|gb|EFC02054.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160]
gi|283461674|gb|EFC08758.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19]
gi|296885908|gb|EFH24843.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|298693327|gb|ADI96549.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED133]
gi|300887650|gb|EFK82846.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH70]
gi|315197923|gb|EFU28256.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS01]
gi|320141422|gb|EFW33265.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144405|gb|EFW36170.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177]
gi|323443267|gb|EGB00884.1| DNA gyrase subunit B [Staphylococcus aureus O46]
gi|329731718|gb|EGG68078.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189]
gi|334274194|gb|EGL92521.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21310]
gi|341839825|gb|EGS81379.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21235]
gi|341844001|gb|EGS85221.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21259]
gi|341844115|gb|EGS85334.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21269]
gi|344176324|emb|CCC86774.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus LGA251]
gi|359829127|gb|AEV77105.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus M013]
gi|365165103|gb|EHM56932.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21209]
gi|365243554|gb|EHM84228.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21232]
gi|371975308|gb|EHO92603.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21262]
gi|371985759|gb|EHP02813.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21283]
gi|374362067|gb|AEZ36172.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus VC40]
gi|374396606|gb|EHQ67837.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21342]
gi|375019434|gb|EHS12988.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-24]
gi|375025187|gb|EHS18594.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-88]
gi|375028623|gb|EHS21966.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-91]
gi|375031320|gb|EHS24602.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-105]
gi|375036979|gb|EHS30035.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-111]
gi|375378271|gb|EHS81677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-160]
gi|377699805|gb|EHT24151.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1114]
gi|377721002|gb|EHT45147.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1835]
gi|377728364|gb|EHT52466.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG547]
gi|377741004|gb|EHT65000.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1612]
gi|377745642|gb|EHT69618.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1770]
gi|377773189|gb|EHT96935.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIGC128]
gi|383972913|gb|EID88936.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CO-23]
gi|436429839|gb|ELP27203.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus DSM 20231]
gi|436505158|gb|ELP41103.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21282]
gi|445548370|gb|ELY16622.1| DNA gyrase subunit B [Staphylococcus aureus KT/314250]
gi|445562477|gb|ELY18648.1| DNA gyrase subunit B [Staphylococcus aureus KT/Y21]
Length = 644
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|403669915|ref|ZP_10935091.1| DNA gyrase subunit B [Kurthia sp. JC8E]
Length = 639
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/552 (48%), Positives = 371/552 (67%), Gaps = 11/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS V V RDG + K+ RG+
Sbjct: 97 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTQTIVQVHRDGHIHEIKFERGQT 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + D GT RF D ++F ++ + +A R+RELA+LN + I++
Sbjct: 155 VQELKV----IGDTDHNGTTTRFKADPEIFKETTVYEFDILAHRVRELAYLNRGIRISII 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E E+ ++Y + GG++ YV+ +N K+P+H+ + + + DGI+I++A+Q+ S +
Sbjct: 211 DEREGQERR--SDYHYEGGIKSYVEHINEKKEPIHEAIDLKGEKDGISIEIAMQYNS-GF 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GGTH G K +LTR +N +K+ +K D +LSGE VREGL I
Sbjct: 268 ATNIFSFANNINTYEGGTHESGFKTALTRVINDYARKNSLLKSADANLSGEDVREGLVAI 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN EV + + E+ +L +P V +I+ K L A +A
Sbjct: 328 VSIKHPDPQFEGQTKTKLGNSEVSTITNSLFSEHFERFLLENPTVARTIVDKGLIASRAR 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR++ R+KS L SSLPGKLADCSS PEE EI+IVEGDSAGGSAK GRDR FQA
Sbjct: 388 VAAKKAREMTRRKSALEVSSLPGKLADCSSRHPEECEIYIVEGDSAGGSAKSGRDRHFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+ +I A+G G+ GE+F E RYHKI+I+TDADVD
Sbjct: 448 ILPLRGKILNVEKARLDRILSNAEIRAMITAIGTGI-GEEFNLEKARYHKIVIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+R+ + L + G +Y+ PPLY+V++GK ++YCY DAEL+++ S
Sbjct: 507 GAHIRTLLLTFFFRFMRPLIEAGYVYIAQPPLYQVKQGKHLEYCYSDAELQEILSGLSQQ 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM QLW+TT++PE R+L Q+ ++DA EA+ F LMG V+ R++
Sbjct: 567 PKPMVQRYKGLGEMNADQLWDTTMDPEHRVLLQVELDDALEADRAFEDLMGDDVEPRRKF 626
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 627 IHENAVYVENLD 638
>gi|290968148|ref|ZP_06559693.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|335049908|ref|ZP_08542891.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
gi|290781823|gb|EFD94406.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L]
gi|333762037|gb|EGL39553.1| DNA gyrase, B subunit [Megasphaera sp. UPII 199-6]
Length = 640
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/554 (49%), Positives = 379/554 (68%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY +SGGLHGVG+SVVNALS EV V RD + ++RG
Sbjct: 95 VVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSIQTEVKVKRDNYLWDISFARGIT 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT ++ + GT + F PD ++F + +D +T+ R+RELAFLN L I L
Sbjct: 153 EKKLT-KTRALEPGEETGTTVHFKPDPEIFPDVV-YDFDTLKTRLRELAFLNKGLHITLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+ E N+ Y + GGL +VQ+LN +K+ +H V+ + + + +D+A+Q+ +D
Sbjct: 211 ---DNREHNKQEVYCYEGGLISFVQFLNENKQAVHPTVIPLDGEKNQVMVDIAMQY-NDG 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L + N I T +GGTH+ G +++LTRT+N G+ + +K+ + +LSGE VREGLT
Sbjct: 267 YSENILTFVNDIFTEEGGTHLSGFRSALTRTINDYGRSAGIIKENEDNLSGEDVREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+V P+FEGQTKT+LGN EV+ +VD V + L E+ HP SI++K+++A +A
Sbjct: 327 IVSVKVREPQFEGQTKTKLGNSEVKGIVDTLVSDGLREFFGEHPVEAKSIVNKTITASRA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+L R+K+ L SSLPGKLADCS + E +EI++VEGDSAGGSAKQGRDR+FQ
Sbjct: 387 RQAARRARELTRRKNALEISSLPGKLADCSEKSSERTEIYLVEGDSAGGSAKQGRDRKFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + NEEI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 447 AILPLRGKIINVEKARLDKILANEEIRAMITAFGTGI-GEEFDITKRRYDKIIIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK-KVKSSFP 478
DGAHIRTLLLTFFYR+ K L EG +Y+ PPLY+V +GKQ+ Y Y D + K+
Sbjct: 506 DGAHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQVRKGKQMWYFYTDETMNAKLDELGR 565
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+QR+KGLGEM P QLWETT++PE R + Q+ +EDA EA+ +FS LMG +V+ R+
Sbjct: 566 DTNNIVVQRYKGLGEMNPEQLWETTMDPEYRTMLQVHLEDAVEADRIFSVLMGDKVEPRR 625
Query: 539 ELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 626 QFIQENAKKVRNLD 639
>gi|78707357|gb|ABB46484.1| DNA gyrase subunit B [Acholeplasma laidlawii]
Length = 631
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 360/552 (65%), Gaps = 16/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+T LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y QKY RG P
Sbjct: 93 ILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQKYERGIPA 150
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L S D+ GT I F D +FT + +++ T+ RI++LAFLN L + L
Sbjct: 151 YDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNKGLKLNLI- 205
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA+Q+ D+Y
Sbjct: 206 -DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELAMQFV-DSY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + + N+I T +GG H +G K +LTR ++ K KD S+SGE REGLT I
Sbjct: 264 SPNLHSFTNNISTTEGGMHEDGFKMALTRVISKYADDLKMKKDD--SISGEDTREGLTAI 321
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K L A +A
Sbjct: 322 ISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEKVLLATRAR 381
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQGRD FQA
Sbjct: 382 VAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQGRDSEFQA 441
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
I+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+I+TDADVD
Sbjct: 442 IMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIVIMTDADVD 500
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL ++ + +
Sbjct: 501 GAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYAYNEQELNELLKTIETK 560
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG V+ RK+
Sbjct: 561 P--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMGEEVEPRKDF 618
Query: 541 IQ-NAANLVNLD 551
IQ NA ++D
Sbjct: 619 IQKNAQYATDID 630
>gi|433653751|ref|YP_007297459.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433291940|gb|AGB17762.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 633
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/551 (48%), Positives = 380/551 (68%), Gaps = 16/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF ++ Y VSGGLHGVGLSVVNALS+ LEV V ++G Y QKY RG P +
Sbjct: 96 LTVLHAGGKF--NNDVYKVSGGLHGVGLSVVNALSKRLEVIVKQNGKVYEQKYERGVPKS 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + D GT IRF PD ++F T +++D++ ++ R+REL+FLN + I L E
Sbjct: 154 ELKI----IGDTDETGTMIRFKPDDEIFET-LEYDYDVLSQRLRELSFLNKGVRIRLMDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
E + + + GG+ E+V++LN +K+ LH + + D +++A+Q+ +D+Y+
Sbjct: 209 RDGKE----DVFHYEGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVAMQY-NDSYT 263
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD D +L GE VREGLT II
Sbjct: 264 ENIFSFANNIDTREGGTHLIGFKAALTKVINDYARKFNIIKDNDKNLQGEDVREGLTAII 323
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ NP+FEGQTKT+LGN E+R +VD V E LT ++E +P + IL K+ SA +A
Sbjct: 324 SVKLMNPQFEGQTKTKLGNSEMRSIVDSVVTEKLTAFMEENPSLSKVILEKATSAARARE 383
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+SLPGKLADCS + E+++VEGDSAGGSAK GRD R+QAI
Sbjct: 384 AARKARELTRRKSALESTSLPGKLADCSEKDASKCELYLVEGDSAGGSAKMGRDSRYQAI 443
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + ++EI+ +I ALG G+ G DF LRYHK++I+TDADVDG
Sbjct: 444 LPLRGKILNVEKARLDRILSSDEIKAMITALGTGI-GSDFDISKLRYHKVVIMTDADVDG 502
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+E+ K+V Y Y D EL +
Sbjct: 503 SHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKIEKNKKVYYAYSDKELDNILKEIGREN 562
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
Y++QR+KGLGEM QLW+TT++P +R + ++ ++DA A+ +F+ LMG +V+ R+E I
Sbjct: 563 -YNVQRYKGLGEMDAEQLWDTTMDPGKRTMLKVSLDDAIAADEIFTILMGDKVEPRREFI 621
Query: 542 QNAANLV-NLD 551
+ A V NLD
Sbjct: 622 EKYAKTVRNLD 632
>gi|253681222|ref|ZP_04862020.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
gi|253562460|gb|EES91911.1| DNA gyrase, B subunit [Clostridium botulinum D str. 1873]
Length = 636
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/554 (50%), Positives = 393/554 (70%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ +V V R+G + Q+Y +GK
Sbjct: 94 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSKYCKVEVRREGHIWMQEYKKGKV 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L + D +GT + F PD ++F +QFD++T+A R+RELAFLN + I L
Sbjct: 152 ASELEI----IGDSDEKGTLVYFEPDDEIFE-EVQFDYDTLAHRLRELAFLNKGIRITLI 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + EK Q E+ + GG++ +V +LN +K+ LH D + + D +++ALQ+ +D
Sbjct: 207 DE-REEEKKQ--EFHYEGGIKSFVSYLNRNKQTLHEDPIYVEGNKDDYLVEVALQY-NDT 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+D + +AN+I TI+GGTH+ G K++LTR LN ++ +K+ D +LSG+ REGLT
Sbjct: 263 YNDNIFAFANNIDTIEGGTHLAGFKSALTRALNDYARRYGYLKEADKNLSGDDTREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E ++E+LE +P+ +++ KSL+A +A
Sbjct: 323 VISVKLTDPQFEGQTKTKLGNTEVRGIVDSIVFERVSEFLEENPNTAKTVIEKSLTAARA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KSVL S++LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 383 REAAKKARELTRRKSVLESTALPGKLADCSSKDPSECEIYIVEGDSAGGSAKQGRDRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + +E+I+ +I A G G+ G+DF E +RYH+III+TDADV
Sbjct: 443 AILPLRGKIMNVEKQRLDKILNSEQIRAMITAFGAGI-GKDFDIEKIRYHRIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTFFYRY + L + G +Y+ PPLY+V++GK ++Y Y D EL++V +
Sbjct: 502 DGAHIATLLLTFFYRYMRELVEGGHVYIAQPPLYQVKKGKIIRYSYSDNELQQVLTEIGG 561
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT+NPE R L ++ I+DA A+ +F+ LMG +V+ R+
Sbjct: 562 KDKNTEIQRYKGLGEMDATQLWDTTMNPEHRTLVKVTIDDAMRADEIFTILMGDKVEPRR 621
Query: 539 ELI-QNAANLVNLD 551
E I +NA +VNLD
Sbjct: 622 EFIEENAKRVVNLD 635
>gi|448346437|ref|ZP_21535322.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
gi|445632640|gb|ELY85851.1| DNA gyrase subunit B [Natrinema altunense JCM 12890]
Length = 642
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/548 (47%), Positives = 373/548 (68%), Gaps = 10/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRHAFEAGEP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT IRFWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 151 VGDME-RVRDMEPDEETGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNSGVRITLR 208
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+E++D + Y + GG+ E+V +LN + +HD V+ F + I +++A+Q +
Sbjct: 209 DEREETDEGETVAETYEYDGGIREFVDYLNETRSAMHDDVIYFEDEAQNIQVEVAMQ-AT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 268 EELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDNNLKGEDIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++ A
Sbjct: 328 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIVAKAVEAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 388 KARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNPD 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 448 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKKIIMATDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE + +
Sbjct: 507 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDAIVAEK 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 567 CDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLMGDAVEPR 626
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 627 KQFIKDHA 634
>gi|332798030|ref|YP_004459529.1| DNA gyrase subunit B [Tepidanaerobacter acetatoxydans Re1]
gi|332695765|gb|AEE90222.1| DNA gyrase, B subunit [Tepidanaerobacter acetatoxydans Re1]
Length = 635
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/552 (49%), Positives = 379/552 (68%), Gaps = 16/552 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF +S GY VSGGLHGVG+SVVNALS +EV V RDG ++QKY RGKPVT
Sbjct: 96 LTMLHAGGKF--NSGGYKVSGGLHGVGVSVVNALSSWMEVEVKRDGGIFYQKYERGKPVT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
V+ + GT+I F PD ++F + F + + R+RE AFLN + I L
Sbjct: 154 ----DVIRKGDTEETGTKITFMPDNEIFEDTV-FSQDILTQRLREQAFLNRGIRIEL--- 205
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYS 181
D N + + GG+ +V++LN + LH+ + D + +++A+Q+ +D+Y
Sbjct: 206 -FDERTGNSNVFHYEGGIVSFVKYLNRKRDVLHEKPIYMSAARDDMEVEVAMQY-NDSYL 263
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+T+L +AN+I T +GGTH+ G + +LTR++N +K +K++D +LSGE VREGLT +I
Sbjct: 264 ETVLTFANNINTHEGGTHLSGFRTALTRSMNDYMRKMNLLKEQDANLSGEDVREGLTAVI 323
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV++ NP+FEGQTKT+LGN E+R +VD V E ++ +LE +P + I+ K+L A +A
Sbjct: 324 SVKLTNPQFEGQTKTKLGNSEIRSLVDTVVGEGISRFLEENPAIARVIVEKALGAARARE 383
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+K+ L ++LPGKLADC P E+++VEGDSAGGSAKQGRD + QAI
Sbjct: 384 AARKARELTRRKTALEHTTLPGKLADCRERDPRLCELYLVEGDSAGGSAKQGRDPQIQAI 443
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKILNVE+ + NEEI+++I ALG G+ GE+F E LRYHKII++ DADVDG
Sbjct: 444 LPLRGKILNVEKARMDKILNNEEIRSMITALGTGI-GEEFDIEKLRYHKIILMADADVDG 502
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-PSN 480
AHIRTLLLTFFYRY + L + G IY+ PPLY+V GK+ Y +DD EL K+ S S
Sbjct: 503 AHIRTLLLTFFYRYMQPLIEAGKIYIAQPPLYRVVLGKKDYYAFDDLELSKILESLGNSR 562
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
I+RFKGLGEM QLWETT+NPE R + ++ +EDA A+ +F+ LMG +V+ R++
Sbjct: 563 ERAEIKRFKGLGEMAAEQLWETTMNPETRTILKVSLEDAVAADEIFTILMGDKVEPRRQF 622
Query: 541 I-QNAANLVNLD 551
I ++AA + NLD
Sbjct: 623 IFEHAAEVQNLD 634
>gi|448339329|ref|ZP_21528357.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
gi|445620558|gb|ELY74054.1| DNA gyrase subunit B [Natrinema pallidum DSM 3751]
Length = 642
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/548 (47%), Positives = 374/548 (68%), Gaps = 10/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRHAFEAGEP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT IRFWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 151 VGDME-RVRDMEPDEETGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNSGVRITLR 208
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+E++D ++ Y + GG+ E+V +LN + +HD ++ F + I +++A+Q +
Sbjct: 209 DEREETDEGESVAETYEYDGGIREFVDYLNETRSAMHDDIIYFEDEAQNIQVEVAMQ-AT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 268 EELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDNNLKGEDIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++ A
Sbjct: 328 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIVAKAVEAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 388 KARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNPD 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII+ TDA
Sbjct: 448 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKKIIMATDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE ++
Sbjct: 507 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDRIVEEK 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 567 CDGTPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLMGDAVEPR 626
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 627 KQFIKDHA 634
>gi|418953131|ref|ZP_13505137.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|418984497|ref|ZP_13532192.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
gi|375375648|gb|EHS79218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-189]
gi|377710096|gb|EHT34348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1500]
Length = 640
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 155 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 211 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REG+T
Sbjct: 269 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGEDTREGMTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 329 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|189502463|ref|YP_001958180.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497904|gb|ACE06451.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus
5a2]
Length = 651
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/565 (48%), Positives = 375/565 (66%), Gaps = 26/565 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ TV+RDG Y Q+Y++G P
Sbjct: 98 VVMTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTHLQATVYRDGKIYQQEYAKGAP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V + +GT I F PD +FTT ++++TIA R+ ELA+LN LTI L
Sbjct: 156 LYP----VKEVGTTTLRGTTIHFQPDDSIFTTTT-YNYSTIAARLGELAYLNAGLTIELT 210
Query: 121 K-EDSDPEKNQYNEYFFA-GGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLAL 173
+ D E N E F + GGL E+V +L+ + +P++ + G + DV + +AL
Sbjct: 211 DLREQDQEGNFLQETFHSEGGLAEFVAYLDDAREKLIPQPIY-MEGEKYDV---PVQVAL 266
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ + +++ ++ Y N+I TI+GGTH+ G + +LTRTL S +KS ++ + + G+
Sbjct: 267 SYNT-GFTENVVSYVNNINTIEGGTHVAGFRRALTRTLKSYAEKSNLLEKAKVEIVGDDF 325
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +ISV+V P+FEGQTKT+LGN EV VD V E L YLE HP I+SK
Sbjct: 326 REGLTAVISVKVSEPQFEGQTKTKLGNAEVVGAVDSCVSETLQNYLEEHPQEAKIIVSKV 385
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A +A AA++AR++V++K+VL LPGKLADCS P E+++VEGDSAGG+AKQG
Sbjct: 386 ILAAQARHAARKAREMVQRKNVLTGGGLPGKLADCSDNDPAACELYLVEGDSAGGTAKQG 445
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYH 409
RDRRFQAILPLRGKILNVE+ E +Y NE+++N+I ALG+ E+ K E LRYH
Sbjct: 446 RDRRFQAILPLRGKILNVEKAQEHRIYDNEQLRNMIMALGITFGTEEDAKAVNLEKLRYH 505
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
K+II+TDADVDG+HIRTL+LTFFYRY K L + G +Y+ +PPLY V+RG + +YC+ + +
Sbjct: 506 KVIIMTDADVDGSHIRTLILTFFYRYLKVLLERGFLYIALPPLYLVKRGSESRYCWTEQD 565
Query: 470 -LKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 526
+ VK P S IQR+KGLGEM QLW TT++P R LKQ+ IE AAEA+ +F
Sbjct: 566 RIAAVKDFSPDGKTESVNIQRYKGLGEMNAEQLWTTTMDPAVRSLKQVTIESAAEADHLF 625
Query: 527 SSLMGARVDTRKELIQNAANLVNLD 551
S LMG V R++ IQ A +D
Sbjct: 626 SILMGDEVAPRRDFIQLHAKYAQID 650
>gi|320159847|ref|YP_004173071.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
gi|319993700|dbj|BAJ62471.1| DNA gyrase subunit B [Anaerolinea thermophila UNI-1]
Length = 639
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/555 (48%), Positives = 376/555 (67%), Gaps = 16/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFG S Y VSGGLHGVG+S VNALSE EV V RDG + Q+Y RG P
Sbjct: 96 VVMTVLHAGGKFGSGS--YKVSGGLHGVGVSAVNALSEWCEVEVRRDGKVHFQRYERGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V+ + GT+ F D +F + + +T+ R RE+AF+ K+TI L
Sbjct: 154 VEPV--KVIGKCKPNETGTKTTFRFDPTIFKGDLDYKFDTLVQRFREMAFVTRKVTIRLI 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E + E + ++F GG+ +V++LN +++ LH VV K+V+G+ I+ A+Q+ +DAY
Sbjct: 212 DERASREMS----FYFEGGITSFVRYLNRNREVLHPVVYAEKEVEGVGIEAAIQY-TDAY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++++ +AN+I TIDGGTH+ G++A++TR +N +++ +KD D + SG+ REGLT I
Sbjct: 267 AESVYSFANTINTIDGGTHLTGLRAAITRVINDYARRNNFLKDGDPNFSGDDTREGLTAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+ P+P+FE QTK +L NPEV+ V Q V E + +LE +P +I+ K L++ +A
Sbjct: 327 VSVKHPDPQFESQTKVKLMNPEVQTYVQQVVGEAFSTFLEENPQAAKAIIQKCLTSARAR 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++ARDLV +KS L S +LPGKLADCS P ++E++IVEGDSAGGSAKQGRDR FQA
Sbjct: 387 DAARKARDLVIRKSTLESLTLPGKLADCSERDPSKTELYIVEGDSAGGSAKQGRDRHFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKILN ER + N E++ LI ALG G+ G+ F LRY ++II+TDADVD
Sbjct: 447 VLPLRGKILNTERARLDKILSNNEVKALISALGTGI-GDSFDLSGLRYGRVIIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF--- 477
G+HIRTLLLTFF+RY L ++G +++ PPLY++ QV+Y Y DA+ ++
Sbjct: 506 GSHIRTLLLTFFFRYMLPLIEDGHLFIAQPPLYRIAYKNQVRYAYTDADRDRILKELGIT 565
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P A SIQR+KGLGEM P QLWETT+NPE R L + +EDAA A+ F LMGA V R
Sbjct: 566 PEKA--SIQRYKGLGEMNPTQLWETTMNPENRTLLMVTVEDAAAADRTFDMLMGAAVPPR 623
Query: 538 KELIQ-NAANLVNLD 551
+ IQ +A ++ NLD
Sbjct: 624 TKFIQTHARDVRNLD 638
>gi|293497972|ref|ZP_06665826.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424]
gi|291096903|gb|EFE27161.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424]
Length = 644
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|116871428|ref|YP_848209.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740306|emb|CAK19424.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 646
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+FT +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEVQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKVFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDYLASLDK 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 633 FIEENAQYVKNLD 645
>gi|221141520|ref|ZP_03566013.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6009]
gi|257424201|ref|ZP_05600630.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257426878|ref|ZP_05603280.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429514|ref|ZP_05605901.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432161|ref|ZP_05608524.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435122|ref|ZP_05611173.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|258423233|ref|ZP_05686125.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|282907052|ref|ZP_06314900.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|282910031|ref|ZP_06317839.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282912279|ref|ZP_06320075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282912919|ref|ZP_06320711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282922547|ref|ZP_06330237.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|283959489|ref|ZP_06376930.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293511562|ref|ZP_06670256.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|293550171|ref|ZP_06672843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|295429302|ref|ZP_06821924.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589196|ref|ZP_06947837.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|304379953|ref|ZP_07362682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|384860687|ref|YP_005743407.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|384866349|ref|YP_005746545.1| DNA topoisomerase subunit B [Staphylococcus aureus subsp. aureus
TCH60]
gi|384868593|ref|YP_005751307.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|387141643|ref|YP_005730036.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|415683078|ref|ZP_11448344.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|417888971|ref|ZP_12533071.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|417890994|ref|ZP_12535061.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|418281330|ref|ZP_12894143.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|418281879|ref|ZP_12894677.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|418307216|ref|ZP_12918941.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|418559586|ref|ZP_13124125.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|418565294|ref|ZP_13129704.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|418580682|ref|ZP_13144768.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|418601048|ref|ZP_13164494.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|418872309|ref|ZP_13426653.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|418887938|ref|ZP_13442077.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|418890522|ref|ZP_13444647.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896380|ref|ZP_13450457.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418899314|ref|ZP_13453378.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|418907689|ref|ZP_13461707.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|418915846|ref|ZP_13469811.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|418921590|ref|ZP_13475514.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|418947149|ref|ZP_13499537.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|418981974|ref|ZP_13529684.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|418992735|ref|ZP_13540377.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|424786730|ref|ZP_18213514.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
gi|59797755|sp|Q6GKU0.3|GYRB_STAAR RecName: Full=DNA gyrase subunit B
gi|257273219|gb|EEV05321.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276509|gb|EEV07960.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279995|gb|EEV10582.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257283040|gb|EEV13172.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285718|gb|EEV15834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876]
gi|257846562|gb|EEV70584.1| DNA gyrase subunit B [Staphylococcus aureus A9635]
gi|269939531|emb|CBI47889.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20]
gi|282314768|gb|EFB45154.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101]
gi|282323019|gb|EFB53338.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899]
gi|282323975|gb|EFB54291.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326097|gb|EFB56402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329951|gb|EFB59472.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260]
gi|283789081|gb|EFC27908.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919218|gb|EFD96294.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015]
gi|291465520|gb|EFF08052.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809]
gi|295127061|gb|EFG56705.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577707|gb|EFH96420.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus MN8]
gi|302749916|gb|ADL64093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304341533|gb|EFM07443.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312436854|gb|ADQ75925.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus TCH60]
gi|315195231|gb|EFU25619.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus
aureus subsp. aureus CGS00]
gi|329312728|gb|AEB87141.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131]
gi|341852861|gb|EGS93744.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21200]
gi|341853903|gb|EGS94782.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21195]
gi|365165431|gb|EHM57218.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21178]
gi|365172167|gb|EHM62897.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21202]
gi|365245785|gb|EHM86389.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21194]
gi|371974449|gb|EHO91781.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21264]
gi|371974764|gb|EHO92081.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21252]
gi|374400039|gb|EHQ71162.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21345]
gi|375367363|gb|EHS71326.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-125]
gi|375376834|gb|EHS80348.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus IS-157]
gi|377705406|gb|EHT29711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708099|gb|EHT32391.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1214]
gi|377713874|gb|EHT38082.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1605]
gi|377735389|gb|EHT59422.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1176]
gi|377737693|gb|EHT61703.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1233]
gi|377748742|gb|EHT72698.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG290]
gi|377753673|gb|EHT77590.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1267]
gi|377756551|gb|EHT80448.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG1524]
gi|377760519|gb|EHT84398.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus CIG149]
gi|377763107|gb|EHT86964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|421955106|gb|EKU07449.1| DNA gyrase subunit B [Staphylococcus aureus CN79]
Length = 644
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|193211690|ref|YP_001997643.1| DNA gyrase subunit B [Chlorobaculum parvum NCIB 8327]
gi|193085167|gb|ACF10443.1| DNA gyrase, B subunit [Chlorobaculum parvum NCIB 8327]
Length = 647
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/557 (47%), Positives = 371/557 (66%), Gaps = 19/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE E V+RDG + Q Y RG P
Sbjct: 103 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEAEVYRDGKIFRQTYKRGVP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + D++GT++ F PD +F +F + I R+RELAFLN L I ++
Sbjct: 161 ----QGGVEEVGTTDQKGTKVTFKPDPDIFKIT-EFRKDIIIDRMRELAFLNSNLRIIVQ 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDA 179
+ E + F GGL E+V++ + ++ L + + + + +++ALQ+ +D+
Sbjct: 216 DAEGFEET-----FHFEGGLREFVRFTDANRLSLLKEPIFLSGERESTMVEIALQY-NDS 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ I+L+G+ +EGLT
Sbjct: 270 YQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNVKITLTGDDFKEGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+VP P+FEGQTKT+LGN E + +V+ V E L E+ E +P L I+ K A +
Sbjct: 330 VISVKVPEPQFEGQTKTKLGNSETQSIVETIVNEQLAEFAESNPGTLKLIIEKVKGAAIS 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A++L R+KSVL SS LPGKLADCS P+ E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 390 REAARKAKELTRRKSVLESSGLPGKLADCSINDPDHCELYIVEGDSAGGSAKQGRDRSFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ +I ALG + E+F E LRY KIII+TDADV
Sbjct: 450 AILPLKGKILNVEKARLHKMLENEEIKTIILALGTSIGEEEFSPEKLRYGKIIIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKS 475
DGAHIRTLLLTFF+RY ++L + G +++ PPLY V+ G++ QY +D+ E +++K
Sbjct: 510 DGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLVKAGREQQYAWDEEERASITEQMKK 569
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
A SIQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+LMG +V+
Sbjct: 570 LQKGKANVSIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVTVENAMEADQVFSTLMGDKVE 629
Query: 536 TRKELI-QNAANLVNLD 551
R+ I QNA + LD
Sbjct: 630 PRRNFIEQNAKYVRRLD 646
>gi|404477339|ref|YP_006708769.1| DNA gyrase subunit B [Staphylococcus aureus 08BA02176]
gi|404438828|gb|AFR72021.1| DNA gyrase subunit B [Staphylococcus aureus 08BA02176]
Length = 640
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D +FT +++ T+ RIRELAFLN + I LR
Sbjct: 155 QFDLK----EVGTTDKTGTVIRFKADGDIFTETTVYNYETLQQRIRELAFLNKGIQITLR 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 211 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 269 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 329 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 508 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|160941457|ref|ZP_02088792.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
gi|158435603|gb|EDP13370.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
BAA-613]
Length = 637
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 272/555 (49%), Positives = 377/555 (67%), Gaps = 14/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q+Y RGK
Sbjct: 92 VVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYKDGNIYQQRYERGK- 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T ++ ++ GTR+ F PDK++F + +D++T+ R+RE AFL L I L
Sbjct: 149 -VTYPLKIVGKCGPEQHGTRVTFLPDKEIFEETV-YDYDTLKIRLRETAFLTKNLKIIL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
K+D D +K + + + GG++E+V +LN K P++D V + + +G+ +++++Q +D+
Sbjct: 206 KDDRDEKKEKV--FHYEGGIKEFVTYLNKGKTPIYDQVIYCEGTREGVYVEVSMQH-NDS 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH+ G K +LT+T N ++ K +KD + +LSGE +REGLT
Sbjct: 263 YTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYAREKKLLKDSEDNLSGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ +P+FEGQTK +LGN E R VD V E LT +LE +P V S+ KS+ A +A
Sbjct: 323 IISVKIEDPQFEGQTKQKLGNSEARAAVDNIVSEQLTYFLEQNPAVAKSMCEKSILAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK R R Q
Sbjct: 383 RAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKTARSRATQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +Y N EI+ +I A G G+ +DF LRYHKIII+TDADV
Sbjct: 443 AILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-DDFDISKLRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K+V Y Y D EL +
Sbjct: 502 DGAHISTLLLTFIYRFMPELIKQGYVYLAQPPLYKVEKNKKVWYAYSDDELNSILKEIGR 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LMG +V+ R
Sbjct: 562 DNSNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDEETTSEVDLTFTTLMGDQVEPR 621
Query: 538 KELIQ-NAANLVNLD 551
+E I+ NA + NLD
Sbjct: 622 REFIEANAKKVKNLD 636
>gi|49482258|ref|YP_039482.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
gi|49240387|emb|CAG39033.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252]
Length = 643
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 100 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 158 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 214 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 271
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REG+T
Sbjct: 272 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGEDTREGMTA 331
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 332 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 391
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 392 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 451
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 452 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 510
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 511 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 570
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 571 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 630
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 631 FIEDNAVYANLD 642
>gi|416840825|ref|ZP_11903999.1| DNA gyrase subunit B [Staphylococcus aureus O11]
gi|323439694|gb|EGA97412.1| DNA gyrase subunit B [Staphylococcus aureus O11]
Length = 644
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEYRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|16799085|ref|NP_469353.1| DNA gyrase subunit B [Listeria innocua Clip11262]
gi|423101125|ref|ZP_17088829.1| DNA gyrase, B subunit [Listeria innocua ATCC 33091]
gi|16412427|emb|CAC95239.1| DNA gyrase subunit B [Listeria innocua Clip11262]
gi|370792240|gb|EHN60117.1| DNA gyrase, B subunit [Listeria innocua ATCC 33091]
Length = 646
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+FT +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEVQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDYLASLDG 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LIQNAANLV-NLD 551
I++ A V NLD
Sbjct: 633 FIEDNAQYVKNLD 645
>gi|284023042|ref|ZP_06377440.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 132]
Length = 644
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 373/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQVLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|331270701|ref|YP_004397193.1| DNA gyrase subunit B [Clostridium botulinum BKT015925]
gi|329127251|gb|AEB77196.1| DNA gyrase, B subunit [Clostridium botulinum BKT015925]
Length = 635
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/554 (50%), Positives = 391/554 (70%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ +V V R+G + Q+Y +GK
Sbjct: 94 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSKYCKVEVRREGHVWMQEYKKGKV 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L + + +GT + F PD ++F ++FD++T++ R+RELAFLN I L
Sbjct: 152 ASELEV----IGDSEERGTLVYFEPDDEIFE-EVEFDYDTLSHRLRELAFLNKGTRIILV 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + E+ E+ + GG++ +V +LN +K+ LH+ + + D +++ALQ+ +D
Sbjct: 207 DEREEKEQ----EFHYEGGIKSFVSYLNRNKQTLHEEPIYVEGNKDDYLVEVALQY-NDT 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+D + +AN+I TI+GGTH+ G K++LTR LN ++ +K+ D +LSG+ REGLT
Sbjct: 262 YNDNIFAFANNIDTIEGGTHLAGFKSALTRVLNDYARRYGYLKETDKNLSGDDTREGLTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E ++E+LE +PD +++ KSL+A +A
Sbjct: 322 VISVKLTDPQFEGQTKTKLGNSEVRGIVDSIVSERVSEFLEENPDTAKTVIEKSLTAARA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KSVL S++LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 382 REAAKKARELTRRKSVLESTALPGKLADCSSKDPSECEIYIVEGDSAGGSAKQGRDRRFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + +E+I+ +I A G G+ G+DF E +RYH+III+TDADV
Sbjct: 442 AILPLRGKIMNVEKQRLDKILNSEQIRAMITAFGAGI-GKDFDIEKIRYHRIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-P 478
DGAHI TLLLTFFYRY + L + G +Y+ PPLY+V+RGK ++Y Y D ELK+V +
Sbjct: 501 DGAHIATLLLTFFYRYMRELVEGGHVYIAQPPLYQVKRGKVIRYSYSDNELKQVLTELGG 560
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT+NPE R L ++ I+DA A+ VF+ LMG +V+ R+
Sbjct: 561 KDKNTEIQRYKGLGEMDATQLWDTTMNPEHRTLVKVTIDDAMRADEVFTILMGDKVEPRR 620
Query: 539 ELI-QNAANLVNLD 551
E I +NA +VNLD
Sbjct: 621 EFIEENAKKVVNLD 634
>gi|224536623|ref|ZP_03677162.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|423223514|ref|ZP_17209983.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
gi|224521714|gb|EEF90819.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus
DSM 14838]
gi|392638394|gb|EIY32235.1| DNA gyrase, B subunit [Bacteroides cellulosilyticus CL02T12C19]
Length = 653
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/562 (46%), Positives = 379/562 (67%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + + D GTR +FWPD +FT + +++ +A R+RELA+LN + I L
Sbjct: 158 LYP----VKEIGTSDITGTRQQFWPDNTIFTETV-YNYEILATRMRELAYLNAGIKITLT 212
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
D E N E F++ GL+E+V+++++ ++ L +DV+ + G +++A+ + +
Sbjct: 213 DLRVKDEENNAKMEVFYSEEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G+ REGL
Sbjct: 273 -SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP ++ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNSEVMGAVDQAVGEALNYYLEEHPKEAKMVVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGRDRR
Sbjct: 392 QARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRDRR 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY K+I
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKVI 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + G +Y+ PPLY ++GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIRNGYLYIATPPLYLCKKGKVEEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLW TT+NPE RMLKQ+ IE+AAE + +FS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWSTTMNPENRMLKQISIENAAEVDYIFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|386727827|ref|YP_006194210.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
gi|387601296|ref|YP_005732817.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|418309629|ref|ZP_12921181.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|418980540|ref|ZP_13528319.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|283469234|emb|CAQ48445.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398]
gi|365238435|gb|EHM79271.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21331]
gi|379991710|gb|EIA13176.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus DR10]
gi|384229120|gb|AFH68367.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 71193]
Length = 644
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D +FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGDIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|384548928|ref|YP_005738180.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302331777|gb|ADL21970.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 644
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEENVREDSYHYEGGIKSYVELLNEKKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K++ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEEKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|347547515|ref|YP_004853843.1| putative DNA gyrase subunit B [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980586|emb|CBW84487.1| Putative DNA gyrase subunit B [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 646
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+FT +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKVFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKARYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDYLASLDK 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 633 FIEENAQYVKNLD 645
>gi|218283252|ref|ZP_03489313.1| hypothetical protein EUBIFOR_01902 [Eubacterium biforme DSM 3989]
gi|218216007|gb|EEC89545.1| hypothetical protein EUBIFOR_01902 [Eubacterium biforme DSM 3989]
Length = 655
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/554 (48%), Positives = 370/554 (66%), Gaps = 16/554 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I+TVLHAGGKFGG + Y VSGGLHGVG SVVNALSE LEVTV++DG Y ++ G
Sbjct: 115 IMTVLHAGGKFGGGA--YKVSGGLHGVGASVVNALSEWLEVTVFQDGKIYFIRFENGGHA 172
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L + GT +RF D Q+F +D+ + R+R+LAFLN + + L
Sbjct: 173 VEPLKV----IGETTETGTLVRFKADSQIFKDTTVYDYEILNSRLRQLAFLNKDIRLTLT 228
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
D N+Y + GG+ EYVQ+LN +K + D V + + + DGI ++ALQ+ +D
Sbjct: 229 --DKRTPDGLSNDYKYEGGIIEYVQFLNKNKSTISDKVIYVEGLQDGILAEVALQY-NDG 285
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y ++ + N+I T +GG H +G + +LTR +N+ K + +K KD +LS + V+EGL
Sbjct: 286 YQSSIYSFCNNIHTHEGGYHEDGFRMALTRCINTYAKNNNMIK-KDETLSQDDVKEGLVA 344
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+V E + + +PD+ +I+ K+ A KA
Sbjct: 345 IISVKHPDPQYEGQTKTKLGNSEVRKIVSNIAGEQINRFFLENPDIAKAIVEKAEIASKA 404
Query: 300 ALAAKRARDLVRQKSVLRS-SSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
+AAK+AR+L R+KS L SSLPGKL DCSS E EI+IVEGDSAGGSAKQGRD +
Sbjct: 405 RIAAKKARELTRRKSALDGISSLPGKLTDCSSKDASECEIYIVEGDSAGGSAKQGRDAKT 464
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ +++N+EI+++I A G G++ ED LRYHKI+I+TDAD
Sbjct: 465 QAILPLRGKILNVEKARTHRIFENQEIRSMITAFGCGIQ-EDVDVSKLRYHKIVIMTDAD 523
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDG+HI TL+LTF YR+ K + + G +Y+ PPLYKV++GK++ Y Y + E+ +++ F
Sbjct: 524 VDGSHICTLMLTFLYRFMKPVIEGGYVYIAQPPLYKVQKGKKIAYAYKEQEMDQLREEFK 583
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
Y +QR+KGLGEM QLWETT++P R+LK++ I+DA EA+ VF LMG V+ R+
Sbjct: 584 DG--YKVQRYKGLGEMDAEQLWETTMDPHHRVLKRVTIDDAMEADSVFDMLMGEDVEPRR 641
Query: 539 ELIQNAANLVNLDH 552
E IQ A NLD+
Sbjct: 642 EYIQENAVYANLDY 655
>gi|160883910|ref|ZP_02064913.1| hypothetical protein BACOVA_01884 [Bacteroides ovatus ATCC 8483]
gi|336417360|ref|ZP_08597684.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|423290605|ref|ZP_17269454.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|423294128|ref|ZP_17272255.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
gi|156110640|gb|EDO12385.1| DNA gyrase, B subunit [Bacteroides ovatus ATCC 8483]
gi|335936106|gb|EGM98046.1| DNA gyrase, B subunit [Bacteroides ovatus 3_8_47FAA]
gi|392665258|gb|EIY58786.1| DNA gyrase, B subunit [Bacteroides ovatus CL02T12C04]
gi|392676624|gb|EIY70055.1| DNA gyrase, B subunit [Bacteroides ovatus CL03T12C18]
Length = 652
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/559 (47%), Positives = 372/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I L
Sbjct: 160 S----VKEVGTADITGTRQQFWPDNTIFTETV-YDYKILASRLRELAYLNAGLRITLTDR 214
Query: 123 DSDPEKNQYN--EYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
E + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKGEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|431792075|ref|YP_007218980.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782301|gb|AGA67584.1| DNA gyrase subunit B [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 644
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/551 (48%), Positives = 377/551 (68%), Gaps = 14/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF GS+ Y VSGGLHGVG+SVVNALS L V V +DG YHQ++ RGK +
Sbjct: 105 LTVLHAGGKFSGSA--YKVSGGLHGVGMSVVNALSTWLHVEVKKDGKVYHQEFMRGKTTS 162
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
LT ++ + GT+I F PD ++F I F + +A R+REL+FLN K+ I L E
Sbjct: 163 ELT--IIGEADSGKTGTKISFAPDPEIFE-EIVFQFDILAHRLRELSFLNKKVAITLIDE 219
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYS 181
D ++ Y+ GG+ ++V+++N K+ LH + + F + DG+ +++ +Q+ +D Y
Sbjct: 220 REDKKE----LYYHTGGIFDFVKYINRSKEVLHPEPIYFEAEKDGVQVEICMQY-NDGYI 274
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+ + YAN+I T +GGTH G KA+LTR +N +K+K +K+ D +L+GE +REGLT +I
Sbjct: 275 ENLFSYANNIHTQEGGTHESGFKAALTRVVNDYSRKNKILKENDANLTGEDIREGLTVVI 334
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP P+FEGQTKT+LGN E+R +VD E L+ +L +P ++ KSL A +A
Sbjct: 335 SVKVPEPQFEGQTKTKLGNSEIRSIVDSITGEGLSVFLAENPATGKKVIEKSLQASRARE 394
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AA++AR+L R+KS L S+LPGKLADCS E E++IVEGDSAGGSAK GRDRRFQAI
Sbjct: 395 AARKARELTRRKSALEVSALPGKLADCSWKEAELCEMYIVEGDSAGGSAKSGRDRRFQAI 454
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LP+RGKILNVE+ + N EI+ ++ A+G G+ EDF RYHK++I+TDADVDG
Sbjct: 455 LPIRGKILNVEKARLDRILGNAEIRAMVTAMGTGI-SEDFDITKARYHKLVIMTDADVDG 513
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
AHIR LLLTFF+R+ K L + IY+ PPL+K+++GK V Y Y D EL K++ +
Sbjct: 514 AHIRILLLTFFFRFMKPLIENNYIYIAQPPLFKIKKGKDVYYAYSDEELAKIQDKIGRDK 573
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ IQR+KGLGEM QLW+TT++P +R + Q+ ++DA A+ +F+ LMG V+ R+E I
Sbjct: 574 V-EIQRYKGLGEMNADQLWDTTMDPAKRTILQVTMDDAIRADELFTILMGDMVEPRREFI 632
Query: 542 -QNAANLVNLD 551
+NA + NLD
Sbjct: 633 HENAKYVRNLD 643
>gi|315640352|ref|ZP_07895468.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
gi|315483888|gb|EFU74368.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus
italicus DSM 15952]
Length = 649
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/533 (48%), Positives = 359/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V+++G Y Q+Y RG V+ LT + DR GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVKVFKEGKVYFQEYHRGAVVSDLTI----IGETDRHGTEVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F F+ +A R+RELAFLN L I++ ED E+ + + F GG++ YV
Sbjct: 180 PDPEIFRETTTFEFEKLATRVRELAFLNRGLHISI--EDKRKEEAEVRAFHFEGGIKSYV 237
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K L + + + I++++++Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNATKTVLFPEPIYLEGNQQDISVEVSMQY-TDGYHTNLLSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +++ D +LSGE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 297 KTALTRVINDYARKQKLMRESDENLSGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A KA LAAKRAR++ R+K L SSLPG
Sbjct: 357 RTVTDRLFSEHFAKFLMENPTVGRQIVEKGLLASKARLAAKRAREVTRRKGALEISSLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS ++ E+FIVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSREADKCELFIVEGDSAGGSAKQGRDREFQAILPIRGKILNVEKASMDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGF-GADFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK++ SS P++ ++QR+KGLGEM QL
Sbjct: 536 YVYIAQPPLYGVKQGKNITYVQPGKQAEDELKQIVSSLPASPKPNVQRYKGLGEMDDHQL 595
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++PE RM+ Q+ ++DA EA+ VF LMG RV+ R+ I+ A+ V NLD
Sbjct: 596 WETTMDPENRMMLQVSVDDAIEADQVFEMLMGDRVEPRRAFIEENAHYVKNLD 648
>gi|334135652|ref|ZP_08509135.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
gi|333606847|gb|EGL18178.1| DNA gyrase, B subunit [Paenibacillus sp. HGF7]
Length = 638
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/553 (48%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG SGY VSGGLHGVG+SVVNALS L V V G + Q+Y +GKP
Sbjct: 95 VVLTVLHAGGKFGGDDSGYKVSGGLHGVGISVVNALSSHLLVRVKLHGKIHEQEYRQGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + + GT + F PD ++FT ++++ + RIRELAFLN + I L
Sbjct: 155 QYDLRI----IGETEETGTTVTFTPDPEIFTETTEYEYEILQSRIRELAFLNKGIEINLI 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E +D ++ + + GG++ +V+ LN +K+ LH + + I +++A+Q+ +D+
Sbjct: 211 DERTDTSES----FMYEGGIKSFVEHLNRNKEALHQPPIYVEGSKENIQVEVAIQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T +GGTH G K++LTR LN +K+ +K+ +LSG+ VREGL
Sbjct: 266 YTENIYSFANNINTHEGGTHESGFKSALTRILNDYARKTNAIKESGSNLSGDDVREGLAA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++P P+FEGQTKT+LGN EVR +VD E L E+L+ +P + I+ K L A +A
Sbjct: 326 IISVKIPEPQFEGQTKTKLGNSEVRGIVDSLFAEKLLEFLDENPAIAKKIVEKGLQASRA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KSVL SSLPGKLADCSS SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 REAARKARELTRRKSVLEVSSLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + N EI+ +I A+G G+ +DF RYHK+II+TDADV
Sbjct: 446 AILPIRGKILNVEKARLDKILSNLEIRAIITAMGTGIS-DDFDITKARYHKLIIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT+FYRY + L + G +Y+ PPLYK+ERGK +Y Y D + ++ F
Sbjct: 505 DGAHIRTLLLTYFYRYMRKLIEVGYVYIAQPPLYKLERGKVARYAYSDKQRDEIMKEFGE 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A ++QR+KGLGEM QLW+TT++PE R L Q+ I+DA +A+ +F +LMG V+ R+
Sbjct: 565 GAKVNVQRYKGLGEMDAEQLWDTTMDPETRTLLQVTIQDAMDADSIFDTLMGDNVEPRRN 624
Query: 540 LIQNAANLV-NLD 551
I A V NLD
Sbjct: 625 FIHQHAKYVKNLD 637
>gi|145578005|gb|ABP82721.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar bolivia]
Length = 632
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 379/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+++ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIYEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|325856512|ref|ZP_08172201.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|327313062|ref|YP_004328499.1| DNA gyrase subunit B [Prevotella denticola F0289]
gi|325483481|gb|EGC86454.1| DNA gyrase, B subunit [Prevotella denticola CRIS 18C-A]
gi|326945170|gb|AEA21055.1| DNA gyrase, B subunit [Prevotella denticola F0289]
Length = 657
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/567 (47%), Positives = 380/567 (67%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V ++ GTR +FWPD +FTT + F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETEKTGTRQQFWPDAGIFTTTV-FQWDIVARRMRELAYLNAGIRITLS 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + GI I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQGIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKAYADSDPQISKQIEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEDEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY D
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVSEYCYTDQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEKNATYANID 656
>gi|225181142|ref|ZP_03734588.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
gi|225168111|gb|EEG76916.1| DNA gyrase, B subunit [Dethiobacter alkaliphilus AHT 1]
Length = 650
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/558 (49%), Positives = 383/558 (68%), Gaps = 17/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE LEV V RDG + ++RG
Sbjct: 102 VVLTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEWLEVEVHRDGKIHQMSFARGAI 159
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V LT + GT+IRF PD +VF T ++F + T++ R+RELAFLN + I +
Sbjct: 160 VKELTV----TGKTKKTGTQIRFKPDAEVFET-VEFSYETLSKRLRELAFLNKGIRITVA 214
Query: 120 --RKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGF--RKDVDGITIDLALQ 174
R E +D + E F + GG++ +V++LN +K+PLH + ++ D +++ALQ
Sbjct: 215 DERTELTDETNEKVKETFKYDGGIKSFVEFLNKNKEPLHKKAIYLEQEKEDCCQVEIALQ 274
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ D Y+D +L +AN+I T +GGTH G K++LTR +N +K+ +K+ + ++SGE +R
Sbjct: 275 Y-HDGYNDLILSFANNIHTHEGGTHEAGFKSALTRLINDYARKNNLLKENESNVSGEDIR 333
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV++ P+FEGQTKT+LGN E+R +VD + E L YL +P + ++ KS+
Sbjct: 334 EGLTAVISVKLLEPQFEGQTKTKLGNSEMRGIVDSFLYEELGAYLGENPQMAKRLVEKSV 393
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
SA +A AA++AR+L R+KS L +SLPGKLADC+S P E+++VEGDSAGGSAKQGR
Sbjct: 394 SAARAREAARKARELARRKSALEVTSLPGKLADCASRDPAMCELYLVEGDSAGGSAKQGR 453
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DRRFQAILPLRGKI+NVE+ + NEEI+ +I ALG G+ DF RYHKIII+
Sbjct: 454 DRRFQAILPLRGKIINVEKARLDKILANEEIRTIITALGTGIS-TDFDLAKARYHKIIIM 512
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDG+HIRTLLLTFFYRY + L G +Y+ PPLY V++ ++ Y Y + +L ++
Sbjct: 513 TDADVDGSHIRTLLLTFFYRYMQPLIQAGYVYIAQPPLYLVKKKQKEHYVYTEDQLDRLL 572
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
S+QR+KGLGEM P QLW TT++PE+R + Q+ +EDA A+ +F+ LMG +V
Sbjct: 573 KEIGREG-NSLQRYKGLGEMNPEQLWSTTMDPEKRTILQVTMEDAIRADDMFTVLMGDKV 631
Query: 535 DTRKELIQNAANLV-NLD 551
+ R+ I++ AN V NLD
Sbjct: 632 EPRRVFIESHANQVRNLD 649
>gi|145577991|gb|ABP82714.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
mycoides]
Length = 631
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/555 (50%), Positives = 378/555 (68%), Gaps = 18/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNAL LEV V RDG ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALPTELEVFVHRDGKIHYQKYERGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
L + DR GT RF PD ++FT +++ +T+A R+RELAFLN KLTI
Sbjct: 149 AADLKV----IGETDRTGTITRFKPDSEIFTETTEYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIIDKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFAIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYAQ-PPLFKVQQGKKIQYAYNNKELEKILAEL 556
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 557 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 616
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 617 RNFIQENAKYVKNLD 631
>gi|241889819|ref|ZP_04777117.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
gi|241863441|gb|EER67825.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379]
Length = 638
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/552 (48%), Positives = 377/552 (68%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LE +V RDG Y K+ RG
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEASVHRDGKIYSMKFERGDV 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +T + DR GT IRF D ++F ++++ + RIRELAFLN +TI L+
Sbjct: 155 VQGITV----IGDTDRTGTTIRFKADPEIFQETTVYEYDILRTRIRELAFLNKGITIILK 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E EK + + + GGL EYV+ LN +K LH+ + ++DG +++++Q+ + Y
Sbjct: 211 DERIGQEKEE--TFCYEGGLLEYVEMLNENKDALHEAIYVHGEMDGKEVEISMQYNT-GY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ +L YAN+I T +GGTH G K +LTR +NS GKK+K +KDK+ SL+G+ VREGL I
Sbjct: 268 SNNVLSYANNINTHEGGTHESGFKTALTRIINSYGKKNKLIKDKE-SLTGDDVREGLVAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P I+ K L A +A
Sbjct: 327 ISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKTAKIIVEKGLQASRAR 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK GR+ +FQA
Sbjct: 387 IAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLGRNSKFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPL+GKILNVE+ + N+E+++LI A+G+G+ GE + LRYHKI+I+TDADVD
Sbjct: 447 ILPLKGKILNVEKVRIDKVLANDEVRSLITAIGMGI-GETLNIDKLRYHKIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+RY + L D G +Y+ PPLY ++ GK+ YC+ + ELK+ +
Sbjct: 506 GSHIRTLLLTFFFRYMRELIDAGYVYIARPPLYGLKVGKKEFYCHTEEELKQNIEEHAGD 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM +LW+TT++PE R++ Q+ + DA A+ F +LMG +V+ R++
Sbjct: 566 KKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYQVSVNDAQRADAAFDTLMGEKVEPRRKF 625
Query: 541 IQ-NAANLVNLD 551
I+ NA N++NLD
Sbjct: 626 IEDNALNVINLD 637
>gi|322370371|ref|ZP_08044930.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
gi|320550079|gb|EFW91734.1| DNA gyrase, B subunit [Haladaptatus paucihalophilus DX253]
Length = 638
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/547 (50%), Positives = 369/547 (67%), Gaps = 12/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE +V V RDG + Q + RG P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGISVVNALSEKFDVEVKRDGGVWKQTFERGDP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + + GT RFWPD ++F T F ++T+ R+RELAFLN + I L
Sbjct: 152 AGEME-RVRDMRDDEETGTYQRFWPDTEIFETT-DFTYSTLENRLRELAFLNSGVAITLA 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D EK + + ++GG+ E+V++LN K LH+ V+ F + D I +++A+Q +D
Sbjct: 210 DE-RDEEKG--DTFHYSGGIREFVEYLNETKTALHNEVIYFEDEDDNIQVEVAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GGTH+ G K +LTR +N + + D D +L GE +REGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANDNDMLGDLDENLRGEDIREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+ P+P+FEGQTKT+LGN EVR +V+ +V E L+ Y E HPD +I+SK++ A KA
Sbjct: 326 VISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHEGLSVYFEEHPDTAQAIISKAVEAAKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A +L R+KS L SS+LPGKLADC S P +SE+F+VEGDSAGGSAKQ RDR FQ
Sbjct: 386 RKAAKKAEELTRRKSALESSALPGKLADCQSRDPTKSELFVVEGDSAGGSAKQARDREFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL GK+LNVE+ + +NE+I+N I A+G GV GE+F + RYHKIII+TDADV
Sbjct: 446 AILPLFGKVLNVEKHRLDRVLENEKIRNFITAIGTGV-GEEFDIDDARYHKIIIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELKKVKSSFP 478
DGAHIRTL LT YRY + L + G +Y PPLY+V RGK ++ + ++
Sbjct: 505 DGAHIRTLYLTLLYRYMRPLLEAGYVYAAQPPLYRVRYRGKTYDAMTEEERDEIIEEKCD 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N +QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LMG V RK
Sbjct: 565 GNP-SQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLMGDAVGPRK 623
Query: 539 ELIQNAA 545
+ IQ+ A
Sbjct: 624 QFIQDHA 630
>gi|404406489|ref|YP_006689204.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2376]
gi|422810893|ref|ZP_16859304.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-208]
gi|378751098|gb|EHY61689.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-208]
gi|404240638|emb|CBY62038.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2376]
Length = 646
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+FT +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQV+Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQVEYVYSDGQLEDYLASLDG 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LIQNAANLV-NLD 551
I++ A V NLD
Sbjct: 633 FIEDNAQYVKNLD 645
>gi|190710555|gb|ACE95108.1| gyrase subunit B [Bacillus thuringiensis serovar monterrey]
Length = 627
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|29348838|ref|NP_812341.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|298387912|ref|ZP_06997461.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
gi|383125011|ref|ZP_09945670.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|29340744|gb|AAO78535.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482]
gi|251840836|gb|EES68917.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_6]
gi|298259319|gb|EFI02194.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14]
Length = 653
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/560 (47%), Positives = 378/560 (67%), Gaps = 20/560 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
+ V V D GTR +FWPD +FT + +D+ +A R+RELA+LN L I+L R
Sbjct: 160 S----VKEVGVSDITGTRQQFWPDDTIFTETV-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
+ ++ + + +E F++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEEDGSFKSEVFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEIAIMYNT- 273
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 GFSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLT 333
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A
Sbjct: 334 AVISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAAT 393
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R F
Sbjct: 394 ARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMF 453
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIIL 414
QAILPLRGKILNVE+ +++EI+N+ ALG+ + ED KEA LRYHKIII+
Sbjct: 454 QAILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEDDSKEANIEKLRYHKIIIM 513
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 TDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFI 573
Query: 475 SSFPS---NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
++ NA+++ QR+KGLGEM QLWETT++P+ RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 DTYGGGLENAVHT-QRYKGLGEMNAQQLWETTMDPDNRMLKQVNIDNAAEADYIFSMLMG 632
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 EDVGPRREFIEENATYANID 652
>gi|399924562|ref|ZP_10781920.1| DNA gyrase subunit B [Peptoniphilus rhinitidis 1-13]
Length = 637
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/555 (47%), Positives = 387/555 (69%), Gaps = 16/555 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF +S Y VSGGLHGVG+SVVNALS L T+ RDG Y Q+++RGK
Sbjct: 96 VLTILHAGGKF--DNSAYKVSGGLHGVGVSVVNALSNKLVATIKRDGKIYRQEFARGKRK 153
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L +V+ K+ GT I F PD +F T ++F + ++ R RE+AFLN + I
Sbjct: 154 SEL--NVIGKTKKEDTGTTIYFEPDDTIFET-VEFSFDVLSKRFREMAFLNKGIKI---- 206
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAY 180
E D KN Y + GG++ +V+++N KKP+HD + + ++ + +++A+Q+ +D+Y
Sbjct: 207 EFIDERKNIKEIYHYEGGIKSFVEFINEKKKPIHDEIIYIDEIREETAVEIAIQY-TDSY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ +L +AN+I T +GG+H+ G +++LTRTLN G+K+ +K+K+ +LSGE VREG++ +
Sbjct: 266 SEVVLAFANNINTEEGGSHLSGFRSALTRTLNDYGRKNNIIKEKEENLSGEDVREGISAV 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++P+P+FEGQTK +LGN E R ++D + E L+ +LE +P V IL K+LSA +A
Sbjct: 326 ISVKLPDPQFEGQTKAKLGNSETRGIIDSVLSEELSAFLEENPKVGKQILDKALSARRAR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RARDL R+K+ + S +LPGKL+DC + P +EIF+VEG+SAGGSAK GRD +QA
Sbjct: 386 EAARRARDLTRKKNNIESMTLPGKLSDCQNDDPSRNEIFLVEGNSAGGSAKDGRDSAYQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+NVE+ M + EI+ +I A G G+ GE+F + LRY KIII+TDADVD
Sbjct: 446 ILPLRGKIMNVEKARLDKMLNSSEIRAMITAFGTGI-GEEFDIKKLRYDKIIIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDDAELKKVKSSFPS 479
GAHI TLLLTFF+RY K L +EG +YV PL+ +E+G ++ +YC+++ EL+ +
Sbjct: 505 GAHIMTLLLTFFFRYMKPLIEEGHVYVAQAPLFGIEKGTKILRYCHNEKELRLAVKEYKD 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +I+R+KGLGEM P QLWETT+NP+ R+L ++ I+D EA+ F+ LMG V+ R+E
Sbjct: 565 TKI-NIKRYKGLGEMDPEQLWETTMNPDNRLLLKVNIDDITEADDTFTVLMGTEVEPRRE 623
Query: 540 LIQNAANLVNLDHLD 554
I N V D++D
Sbjct: 624 FI--TENAVYADYID 636
>gi|190710595|gb|ACE95128.1| gyrase subunit B [Bacillus thuringiensis serovar pondicheriensis]
Length = 627
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/548 (50%), Positives = 374/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|350565207|ref|ZP_08933993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
gi|348663986|gb|EGY80513.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
indolicus ATCC 29427]
Length = 640
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/553 (48%), Positives = 388/553 (70%), Gaps = 12/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF S+ Y VSGGLHGVG+SVVNALS L TV R+G + Q +SRG P
Sbjct: 96 VLTILHAGGKF--SNDAYKVSGGLHGVGVSVVNALSTKLTATVKREGKIHQQTFSRGIPT 153
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L ++ ++ GT+I F PD ++F T I F+ + ++ R RE+AFLN + I R
Sbjct: 154 SEL--EIIGKVAESDTGTKISFSPDPEIFDTLI-FEWDILSKRFREMAFLNKGVRINFR- 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D EK + Y + GG++ +V+++N K P+H ++V ++ D +++A+Q+ +DAY
Sbjct: 210 -DYREEKVREEVYHYEGGIKSFVEYINRKKTPIHKEIVYIDQEKDKTLVEIAIQY-TDAY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ ++ +AN+I T +GG+H+ G +++LTRT+N G+K +K+K+ +LSG+ VREGL+ +
Sbjct: 268 SENVISFANNINTEEGGSHLSGFRSALTRTINEYGRKYNIIKEKEENLSGDDVREGLSAV 327
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++PNP+FEGQTK +LGN E R +VD V + LT++LE +P V IL K+LSA +A
Sbjct: 328 ISVKLPNPQFEGQTKAKLGNSETRGIVDSVVSDVLTDFLEENPKVGKLILDKALSARRAR 387
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+RARDL R+K++L + LPGKL+DC + E +EIF+VEG+SAGGSA + RD FQA
Sbjct: 388 EAARRARDLSRKKNMLDAMPLPGKLSDCQLSDNENTEIFLVEGNSAGGSAVEARDSVFQA 447
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+NVE+ M ++EI+ +I A G G+ G+DF E LRY+KI+I+TDADVD
Sbjct: 448 ILPLRGKIMNVEKARLDKMLASDEIKAMITAFGTGI-GQDFNIENLRYNKIVIMTDADVD 506
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFPS 479
GAHI TLLLTFF+RY + L ++G +YV PPL+ + +G K ++Y YD+ ELKK
Sbjct: 507 GAHIMTLLLTFFFRYMRPLIEQGHVYVAQPPLFGILKGNKPLKYVYDELELKKSLEELGR 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ Y I+R+KGLGEM LWETT++PE+R+L ++ IEDA EA+ FS LMG+ V+ R+E
Sbjct: 567 DKKYDIKRYKGLGEMNAEDLWETTMDPEKRVLLKIDIEDAVEADETFSILMGSDVEPRRE 626
Query: 540 LI-QNAANLVNLD 551
I +NA N+D
Sbjct: 627 FIEENALFAENID 639
>gi|385798923|ref|YP_005835327.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
gi|309388287|gb|ADO76167.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228]
Length = 640
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/554 (49%), Positives = 379/554 (68%), Gaps = 13/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTV-WRDGMEYHQKYSRGK 59
+++T LHAGGKFGG GY VSGGLHGVG+SVVNAL+E +EV + W+DG Y QKY RG
Sbjct: 96 VVMTTLHAGGKFGGE--GYKVSGGLHGVGISVVNALTEWMEVEIAWKDGKVYKQKYERGI 153
Query: 60 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
P L ++ + GT I F PD +F I FD +A R++ELAFLN + I +
Sbjct: 154 PQHEL--QLIGNCDGNCTGTTIEFKPDPLIFE-EIDFDFKLLAKRLKELAFLNKGINIKI 210
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
D+ E+ Q ++ F GGL +V++L+ KKPL + + + + +I++A+ +
Sbjct: 211 V--DNRKEEVQQEDFHFDGGLISFVEYLSQSKKPLLSEPIYIEDEAEEGSIEVAIMY-HQ 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y+ ++ +AN+I T +GGTH+ G K++ TRT N + +KD D +L G+ +REG+
Sbjct: 268 GYNTSLYTFANNINTKEGGTHLSGFKSATTRTFNDYARNKNLLKDGDDNLKGQDIREGMI 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV++ P+FEGQTKT+LGN E+R VD +V +L YLE +P V +I+ K++SA
Sbjct: 328 AIISVKLSEPQFEGQTKTKLGNSEMRGFVDSAVSSFLKTYLEENPKVGKAIIEKAISAAH 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++ARDL R+KS L S++LPGKLADCS +++E++IVEGDSAGGSAKQGR+R F
Sbjct: 388 ARKAARKARDLTRRKSALTSTALPGKLADCSKRKADDTEVYIVEGDSAGGSAKQGRNREF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + N+EI+ LI A+G GV GE+F +RY +III+TDAD
Sbjct: 448 QAILPLKGKILNVEKSRLNKILNNDEIRALITAIGTGV-GEEFDLTNIRYDRIIIMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L + G IY+ PPLYKV++G++ +Y Y+D LK++
Sbjct: 507 VDGAHIRTLLLTFFYRYMRPLLENGNIYIAQPPLYKVKKGRREEYVYNDKALKELIEEIG 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + S+QR+KGLGEM P QLW+TT++PE R+L Q+ IEDA A+ FS LMG +V R+
Sbjct: 567 KDRV-SMQRYKGLGEMNPSQLWDTTMDPENRILLQVDIEDAIRADETFSILMGDKVAPRR 625
Query: 539 ELIQNAANLV-NLD 551
E IQ A V NLD
Sbjct: 626 EFIQKHAREVKNLD 639
>gi|190710605|gb|ACE95133.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/548 (50%), Positives = 372/548 (67%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGHKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQASLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|217965929|ref|YP_002351607.1| DNA gyrase subunit B [Listeria monocytogenes HCC23]
gi|386006719|ref|YP_005924997.1| DNA gyrase subunit B [Listeria monocytogenes L99]
gi|386025294|ref|YP_005946070.1| DNA gyrase subunit B [Listeria monocytogenes M7]
gi|217335199|gb|ACK40993.1| DNA gyrase, B subunit [Listeria monocytogenes HCC23]
gi|307569529|emb|CAR82708.1| DNA gyrase, B subunit [Listeria monocytogenes L99]
gi|336021875|gb|AEH91012.1| DNA gyrase subunit B [Listeria monocytogenes M7]
Length = 646
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/553 (50%), Positives = 372/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+FT +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQV+Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQVEYVYSDGQLEDYLASLDG 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ YSIQR+KGLGEM P QLW TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYSIQRYKGLGEMNPEQLWNTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LIQNAANLV-NLD 551
I++ A V NLD
Sbjct: 633 FIEDNAQYVKNLD 645
>gi|257457903|ref|ZP_05623062.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
gi|257444616|gb|EEV19700.1| DNA gyrase, B subunit [Treponema vincentii ATCC 35580]
Length = 638
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/556 (46%), Positives = 372/556 (66%), Gaps = 16/556 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG+SVVNALS S+E V RDG EY QK++ G+P
Sbjct: 93 LVLTRLHAGGKFDKGS--YKVSGGLHGVGVSVVNALSTSMEAIVCRDGFEYVQKFALGEP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ +T ++GT IR+ D +FT ++ + +A R+RELAFLN + I LR
Sbjct: 151 LGPVTKR----GETQKRGTTIRWTADPSIFTETTTYNFDVLAVRLRELAFLNNTIKITLR 206
Query: 121 KED-SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
E S P++ + F GGL +V++LN K+ L + + F + + + +++A+Q+ +D
Sbjct: 207 DERLSTPKEVTFA---FDGGLSHFVRYLNESKQVLPKEPIYFEGEKNDVVVEIAMQY-ND 262
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK---DKDISLSGEHVRE 235
Y + +L + N I T +GGTH+EG K +LTR +N KK+ + +K+ L GE VR
Sbjct: 263 GYKENILSFVNDINTREGGTHLEGFKTALTRVMNEFLKKNAKLSKKMEKEEKLMGEDVRA 322
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT ++SV+VP P+FEGQTKT+LGN EVR +VD + E LT + E +P +D IL K++
Sbjct: 323 GLTAVLSVKVPEPQFEGQTKTKLGNSEVRSIVDTFINEKLTLFFEQNPIEIDKILEKAVG 382
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +AA++A++ R+KS L S LPGKLADCSS PE+ E++IVEGDSAGGSAK+GRD
Sbjct: 383 EATARIAARKAKEATRRKSGLDSFGLPGKLADCSSKDPEKCEVYIVEGDSAGGSAKKGRD 442
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
+ QAILPL GK+LNVE+ + NE++Q +I LG G+ GEDF + +RYHKIII+
Sbjct: 443 SKTQAILPLWGKMLNVEKTRLDKVLNNEKLQPIIATLGTGI-GEDFNLDKIRYHKIIIMA 501
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFF+RY L + G +Y+ +PPLYK+ K+ Y YDD+E + +
Sbjct: 502 DADVDGSHIRTLLLTFFFRYMPELIEHGFVYLAMPPLYKISYNKKEWYVYDDSERDSILN 561
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ ++QR+KGLGEM QLWETT++P +R + ++ + DA EA+ +FS+LMG V+
Sbjct: 562 EIGRSVSPAVQRYKGLGEMDGTQLWETTMDPARRKMMRVTLSDAVEADRIFSTLMGEEVE 621
Query: 536 TRKELIQNAANLVNLD 551
R++ I+ A NLD
Sbjct: 622 PRRKFIEENAVYANLD 637
>gi|163755890|ref|ZP_02163007.1| DNA gyrase, B subunit [Kordia algicida OT-1]
gi|161324061|gb|EDP95393.1| DNA gyrase, B subunit [Kordia algicida OT-1]
Length = 645
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/558 (46%), Positives = 377/558 (67%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+RDG + Q+Y RGK
Sbjct: 96 VVMTEIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLRATVYRDGKIWEQEYERGKA 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D++GT + F PD +FT +++++ T+A R+REL++LN +TI L
Sbjct: 154 LYP----VKAIGDSDKRGTVVTFKPDASIFTQTLEYNYETLANRMRELSYLNKGITITLT 209
Query: 121 KEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ + EK +Y E F + GL+E++++L+ +++ + DVV F + +GI +++A+ + +
Sbjct: 210 DKRNKDEKGEYIGEVFHSQEGLKEFIKYLDGNREQIIADVVAFEGEKNGIPVEVAMTYNT 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+YS+ + Y N+I T +GGTH+ G + LT TL + + + +SG+ REGL
Sbjct: 270 -SYSENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKYAEGTGMLDKLKFDISGDDFREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE HPD +I+ K + A
Sbjct: 329 TAIISVKVAEPQFEGQTKTKLGNREVSASVSQAVSEMLTDYLEEHPDDAKTIVQKVVLAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+AKQGRDR
Sbjct: 389 QARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQDPAKCEVFLVEGDSAGGTAKQGRDRN 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHKI+I
Sbjct: 449 FQAILPLRGKILNVEKAMQHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYHKIVI 508
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + +Y ++D E +
Sbjct: 509 MCDADVDGSHIATLILTFFFRYMKELIENGHIYIAAPPLYLVKKGAKRRYAWNDEERDAI 568
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
F A +IQR+KGLGEM QLW+TT+NP+ R L+Q++I++ EA+ VFS LMG
Sbjct: 569 IEEFGQGA--NIQRYKGLGEMNAEQLWDTTMNPDFRTLRQVMIDNGGEADRVFSMLMGDE 626
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 627 VPPRREFIEKNAVYANID 644
>gi|448329984|ref|ZP_21519278.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
gi|445613172|gb|ELY66882.1| DNA gyrase subunit B [Natrinema versiforme JCM 10478]
Length = 643
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/548 (48%), Positives = 374/548 (68%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V R+G + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAKVKRNGAVFRHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT+IRFWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEETGTQIRFWPDTGIFETG-EISFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 KE--DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E D+D ++ Y + GG+ E+V++LN + +H D++ F + I I++A+Q +
Sbjct: 210 DERVDTDDDEPVAETYEYDGGIREFVEYLNETRSAMHEDIIYFEDEEQNIQIEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +LSGE +REGL
Sbjct: 269 EELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLSDLDNNLSGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+ K++ A
Sbjct: 329 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAQAIVMKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AAK+A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARMAAKKAEELTRRKSALDSTSLPGKLADCQTKEPEEAELFIAEGDSAGGSAKQARNPE 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 449 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE ++
Sbjct: 508 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDQIVEEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 628 KQFIKDHA 635
>gi|403068971|ref|ZP_10910303.1| DNA gyrase subunit B [Oceanobacillus sp. Ndiop]
Length = 641
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 370/552 (67%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LEV V R+ Y +++G P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSNLEVYVHRNEKVYFLGFAKGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D GT F PD ++FT ++ T+ R+RELAFLN LTI +
Sbjct: 158 LGEIEV----VGETDITGTVTHFTPDPEIFTETTDYNFETLEQRLRELAFLNKGLTITIE 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
+ +D E Y ++ GG+ YV+++N +K+ LH+ + GI +++A+Q+ +D +
Sbjct: 214 DKRTDREPVTY---YYEGGVSSYVEYINKNKEVLHEPFYAEGEDKGIAVEVAIQY-NDGF 269
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + +AN+I T +GG H G ++ LTR +N +K+ +K+ + +LSG+ VREG+T I
Sbjct: 270 SSNLFSFANNIHTYEGGAHEVGFRSGLTRVINDYARKNNLIKENETNLSGDDVREGMTAI 329
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV+ P+P+FEGQTKT+LGN EVR + D E +++L +P I+ K L A +A
Sbjct: 330 VSVKHPDPQFEGQTKTKLGNSEVRTITDSVFSELFSKFLYENPTTARIIVDKGLMASRAR 389
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
LAAK+AR+L R+KS L SSLPGKLADCSS SE++IVEG+SAGGSAK GRDR FQA
Sbjct: 390 LAAKKARELTRRKSALEISSLPGKLADCSSKDATISELYIVEGNSAGGSAKSGRDRHFQA 449
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N EI+++I ALG GV G+DF RYHKI+I+TDADVD
Sbjct: 450 ILPLRGKILNVEKARLDRILSNAEIRSMITALGTGV-GDDFDISKARYHKIVIMTDADVD 508
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY + L D G IY+ PPL++V++GK VQY YDD EL +V + P+
Sbjct: 509 GAHIRTLLLTFFFRYMRPLIDNGYIYIAQPPLFQVKQGKSVQYVYDDKELTRVLAEVPAT 568
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+IQR+KGLGEM QLWETT++PE+R L Q+ + DA EA+ VF LMG +V+ R+
Sbjct: 569 PKPAIQRYKGLGEMDAEQLWETTMDPEKRTLLQVELSDAIEADQVFDMLMGDKVEPRRNY 628
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 IEENAKYVQNLD 640
>gi|145577997|gb|ABP82717.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar pulsiensis]
Length = 632
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 378/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 SAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|145578007|gb|ABP82722.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar finitimus]
Length = 632
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/555 (49%), Positives = 378/555 (68%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI +++ALQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVDGSKDGIQVEVALQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNHIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNNILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V ++ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKMVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+K L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKRALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y++ EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKIQQGKKIQYAYNEKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 618 RNFIQENAKYVKNLD 632
>gi|448373987|ref|ZP_21557872.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
gi|445660664|gb|ELZ13459.1| DNA gyrase subunit B [Halovivax asiaticus JCM 14624]
Length = 643
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/548 (49%), Positives = 375/548 (68%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTV RDG Y + RG+P
Sbjct: 94 VILTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVTVTRDGGIYEHGFDRGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V D+ + GT IRFWPD Q+F T ++F + T++ R+RELAFLN + I LR
Sbjct: 152 DGEME-QVGEPDASNETGTSIRFWPDDQIFET-LEFSYATLSNRLRELAFLNSGVAITLR 209
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E + D E E F + GG+ E+V+++N + PLH DVV F + I +++A+Q +
Sbjct: 210 DEREVDDEGVIVQETFEYDGGIREFVEYINETRSPLHRDVVYFTDEDQSIQVEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 269 EELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANENDLLSDLDENLKGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E +PD +I+ K++ A
Sbjct: 329 TAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDGLATYFEENPDTAQAIVLKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AAK+A +L R+KS L S++LPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARKAAKQAEELTRRKSALDSTALPGKLADCQTRDPDEAELFIAEGDSAGGSAKQARNPD 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
+QAILP++GKILNVE+ + +N+EI+NLI A+G G+ G++F + +RY KII+ TDA
Sbjct: 449 YQAILPIKGKILNVEKHRLDRILENDEIRNLITAIGAGI-GDEFDLDEVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE ++ +
Sbjct: 508 DVDGAHIRTLLLTFFYRHMRPLIEHGYVYATQPPLYRIRYRGETYDAMTDAERDEIVAEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLW+TT+NPE R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPEQLWDTTMNPENRILKQVSIEDAAAADRMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I+ A
Sbjct: 628 KQFIKENA 635
>gi|320531090|ref|ZP_08032119.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
gi|320136672|gb|EFW28625.1| DNA gyrase, B subunit [Selenomonas artemidis F0399]
Length = 684
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 376/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGHIYEIAFARGN- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
TT H V + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 200 -TTEKLH--EVGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNHGITITLT 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + +++ + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 DERGEELRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE VREGLT
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLNVLKEKDGNLSGEDVREGLTA 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPSERTMLRVAAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|433638427|ref|YP_007284187.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
gi|433290231|gb|AGB16054.1| DNA gyrase, B subunit [Halovivax ruber XH-70]
Length = 643
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/548 (49%), Positives = 375/548 (68%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEVTV RDG Y + RG+P
Sbjct: 94 VILTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVTVTRDGGIYEHGFDRGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V D+ + GT IRFWPD Q+F T ++F + T++ R+RELAFLN + I LR
Sbjct: 152 DGEME-QVGEPDASNETGTSIRFWPDDQIFET-LEFSYATLSNRLRELAFLNSGVAITLR 209
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E + D E E F + GG+ E+V+++N + PLH DVV F + I +++A+Q +
Sbjct: 210 DEREVDDEGVIVQETFEYDGGIREFVEYINETRSPLHRDVVYFTDEDQSIQVEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 269 EELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANENDLLSDLDENLKGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E +PD +I+ K++ A
Sbjct: 329 TAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDGLATYFEENPDTAQAIVLKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AAK+A +L R+KS L S++LPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARKAAKQAEELTRRKSALDSTALPGKLADCQTRDPDEAELFIAEGDSAGGSAKQARNPD 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
+QAILP++GKILNVE+ + +N+EI+NLI A+G G+ G++F + +RY KII+ TDA
Sbjct: 449 YQAILPIKGKILNVEKHRLDRILENDEIRNLITAIGAGI-GDEFDLDEVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE ++ +
Sbjct: 508 DVDGAHIRTLLLTFFYRHMRPLIEHGYVYATQPPLYRIRYRGETYDAMTDAERDEIVAEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLW+TT+NPE R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPEQLWDTTMNPENRILKQVSIEDAAAADRMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I+ A
Sbjct: 628 KQFIKENA 635
>gi|427384558|ref|ZP_18881063.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
gi|425727819|gb|EKU90678.1| DNA gyrase, B subunit [Bacteroides oleiciplenus YIT 12058]
Length = 653
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/562 (46%), Positives = 378/562 (67%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D GTR +FWPD +FT + +++ +A R+RELA+LN + I L
Sbjct: 158 ----QYPVKEIGTSDITGTRQQFWPDNTIFTETV-YNYEILASRMRELAYLNAGIKITLT 212
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
D E N E F++ GL+E+V+++++ ++ L +DV+ + G +++A+ + +
Sbjct: 213 DLRVKDEEGNAKMEMFYSEEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + ++G+ REGL
Sbjct: 273 -SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP ++ K + A
Sbjct: 332 TAVISIKVQEPQFEGQTKTKLGNSEVMGAVDQAVGEALNYYLEEHPKEAKLVVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGRDRR
Sbjct: 392 QARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRDRR 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY K+I
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKVI 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + G +Y+ PPLY ++GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIRNGYLYIATPPLYLCKKGKVEEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLW TT+NP+ RMLKQ+ IE+AAE + VFS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWSTTMNPDNRMLKQISIENAAEVDYVFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A N+D
Sbjct: 631 MGEDVGPRREFIEKNATYANID 652
>gi|448317100|ref|ZP_21506658.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
gi|445604524|gb|ELY58471.1| DNA gyrase subunit B [Natronococcus jeotgali DSM 18795]
Length = 643
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/548 (48%), Positives = 372/548 (67%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRHAFEGGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT IRFWPD +F T +F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEETGTEIRFWPDGDIFETG-EFSFSTLSSRLRELAFLNSGVRITLR 209
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+E++D Y + GG+ E+V++LN + +HD V+ F + + + +++A+Q
Sbjct: 210 DEREETDDGAAVEETYEYEGGIREFVEYLNETRAVMHDDVIYFEGEDENVQVEVAMQATE 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D ++ +AN+I T +GGTH+ G K +LTR +N G + + D D +L GE +REGL
Sbjct: 270 DLQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYGNERNLLGDVDGNLKGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+ P+P+FEGQTKT+LGN EVR VV+ ++ E L Y E HPD ++I++K++ A
Sbjct: 329 TAVISVKHPDPQFEGQTKTKLGNSEVRGVVEGAMHEQLGTYFEEHPDTAEAIVAKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARKAAQKAEELTRRKSALESTSLPGKLADCQTRDPDEAELFIAEGDSAGGSAKQARNPE 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII+ TDA
Sbjct: 449 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE ++
Sbjct: 508 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAERDEIVEEV 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 628 KQFIKDHA 635
>gi|289422479|ref|ZP_06424322.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429727415|ref|ZP_19262187.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
gi|289157051|gb|EFD05673.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L]
gi|429152573|gb|EKX95391.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius VPI 4330]
Length = 635
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/552 (50%), Positives = 374/552 (67%), Gaps = 13/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALS+ + V RDG Y Q+Y +G V
Sbjct: 94 VLTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSDWVVAEVSRDGKLYRQRYEKG--V 149
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T V+ + K+ GT I F PD +F + F + T+ R REL+FLN + I
Sbjct: 150 TKTKLEVVDENQKE-SGTSITFMPDASIFDEVV-FSYETLEYRFRELSFLNRVIKIVFDD 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
+ EK++ + + GGL EYV++LN K LHD ++ K D TI+LALQ+ +DAY
Sbjct: 208 KRKGQEKSK--TFHYTGGLIEYVKYLNRTKNTLHDQIIYVDKMQDDCTIELALQY-TDAY 264
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ + +AN+I T +GG H+ G K +LT+ +N +++ +KDKD +L+GE +REG+T I
Sbjct: 265 SENIYSFANNINTHEGGVHLSGFKTALTKAMNDYARRNNILKDKDSNLTGEDIREGITAI 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++P P+FEGQTKT+LGN +R +VD E + ++E +P V I+ K L + +A
Sbjct: 325 VSVKLPEPQFEGQTKTKLGNTFMRGIVDSIANEEIGAFMEENPSVARVIIDKCLRSQRAR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+KSVL ++SLPGKLADCS +PE+SEIF+VEGDSAGGSAK GRDR QA
Sbjct: 385 EAAKKARELTRRKSVLETTSLPGKLADCSEKSPEKSEIFLVEGDSAGGSAKGGRDRNIQA 444
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + +EEI+N+I A G G+ GEDF + LRYHKIII+TDADVD
Sbjct: 445 ILPLRGKILNVEKSRLDKILSSEEIKNMITAFGCGI-GEDFDEAKLRYHKIIIMTDADVD 503
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY + L ++G +Y +PPL+K+++ K+ Y Y D EL +
Sbjct: 504 GAHIRTLLLTFFFRYMRPLIEQGYVYAAMPPLFKIKKAKKEYYAYTDRELGSLLDEVGRQ 563
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
I R+KGLGEM QLWETT++PEQR+L+Q+ IEDA A+ FS LMG +V R+E
Sbjct: 564 GT-EISRYKGLGEMNANQLWETTMDPEQRILQQVTIEDAIFADETFSMLMGDKVAPRREF 622
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 623 IEENAKYVRNLD 634
>gi|154249648|ref|YP_001410473.1| DNA gyrase subunit B [Fervidobacterium nodosum Rt17-B1]
gi|154153584|gb|ABS60816.1| DNA gyrase, B subunit [Fervidobacterium nodosum Rt17-B1]
Length = 650
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/558 (48%), Positives = 378/558 (67%), Gaps = 18/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S S Y VSGGLHGVG SVVNALSE +EV V RDG Y Q+Y+RG
Sbjct: 108 VVMTTLHAGGKF--SKSSYKVSGGLHGVGASVVNALSEWMEVEVHRDGKIYRQRYARG-- 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T V + +++GT +RF PDK +FTT +FD +TI R+R+LAFLNP +TI
Sbjct: 164 --VKTTEVEVIGETNKRGTIVRFKPDKLIFTTT-EFDSDTILTRLRDLAFLNPSITIEFV 220
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E +D ++ + +AGGL+E++ LN K LH+VV + +A Q+ +D
Sbjct: 221 DERNDIKRTLH----YAGGLKEFIAHLNKGSKTLHEVVVIDGSQQDCEVHIAFQY-TDED 275
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+T++ + N+I+TIDGGTH+ G K + TR +N LGKK +K + GE +REG+T +
Sbjct: 276 GETIVSFVNNIKTIDGGTHVTGFKTAFTRVVNELGKKKNLIKGE--PFKGEDLREGMTAV 333
Query: 241 ISV-RVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++V + P+FEGQTK++LGN E++ V + V++ LT+Y E++ VL I+ K+ A +A
Sbjct: 334 VNVLMMGTPQFEGQTKSKLGNEEIQDAVAKVVRDKLTDYFEVNETVLKIIIQKAQQAREA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+ V++KS L +S+LPGKLADC + EE+E+FIVEGDSAGGSAKQ RDR FQ
Sbjct: 394 REAAKRAREAVKRKSALGASTLPGKLADCITKNFEEAELFIVEGDSAGGSAKQARDRNFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ E + KNE+++++I A+ G GE+F LRY KI+I+TDADV
Sbjct: 454 AILPLRGKILNVEKSSELKLLKNEQVKDIIMAI-GGGIGENFDTSKLRYGKIVIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELKK-VKSSF 477
DGAHIRTLLL FYRY + L +E IY+ +PPLYK+ G++ Y Y D EL + + +
Sbjct: 513 DGAHIRTLLLALFYRYMRQLIEEERIYIAMPPLYKLSISGEKPMYLYSDEELNEMINIAK 572
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+N Y +QR+KGLGEM P QLWETT+NP+ R + ++ IEDA EA+ +F LMG + R
Sbjct: 573 QNNKRYEVQRYKGLGEMNPEQLWETTMNPKTRKIIKVKIEDAEEADSLFEILMGKDPEER 632
Query: 538 KELIQNAANLVNLDHLDI 555
+E I A ++L LD+
Sbjct: 633 REYIMRHARQLSLVDLDV 650
>gi|313894727|ref|ZP_07828288.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976636|gb|EFR42090.1| DNA gyrase, B subunit [Selenomonas sp. oral taxon 137 str. F0430]
Length = 684
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 376/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGHIYEIAFARGN- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
TT H V + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 200 -TTEKLH--EVGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNHGITITLT 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + +++ + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 DERGEELRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE VREGLT
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKEKDGNLSGEDVREGLTA 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPSERTMLRVAAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|227485761|ref|ZP_03916077.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
gi|227236316|gb|EEI86331.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus lactolyticus ATCC
51172]
Length = 642
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/551 (49%), Positives = 376/551 (68%), Gaps = 20/551 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V RDG Y +++RG+
Sbjct: 103 VLTVLHAGGKF--DDSAYKVSGGLHGVGVSVVNALSEYLIAEVKRDGHVYKMEFARGE-- 158
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+T + + GT+I F PD ++F T I F+ + + R RE+AFLN + I
Sbjct: 159 --VTKDIEVIGDTTETGTKITFKPDGEIFDTTI-FERSILENRFREMAFLNKGVEIRFE- 214
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV-GFRKDVDGITIDLALQWCSDAY 180
D +N + F GG+ E+V +LN +K P+ +++ F +GI ++ A Q+ +D Y
Sbjct: 215 ---DERENFETSFKFEGGISEFVSFLNRNKDPIMEMIPHFDGSQEGIEVEFAFQY-TDGY 270
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ +L YAN+I+T +GGTH+ G+++SLTR++N +K +KD + +L GE +REG+T I
Sbjct: 271 SENILSYANNIQTPEGGTHLSGLRSSLTRSVNDYARKYNFIKDNEENLQGEDIREGITAI 330
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++ +P+FEGQTK++LGN EVR VVD V E+LT +LE +P SI+ K+L++ +A
Sbjct: 331 ISVKISDPQFEGQTKSKLGNSEVRGVVDSYVSEHLTAFLEENPKPAKSIIDKALASRRAR 390
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++ARDL R++S+L S++LPGKLADC ST E+EIFIVEG+SAGGSAK GRD R QA
Sbjct: 391 EAARKARDLTRKRSILDSATLPGKLADCQSTDISENEIFIVEGNSAGGSAKGGRDNRIQA 450
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKI+NVE+ + +EEI+N+I A G G+ G++F LRY KIII+TDADVD
Sbjct: 451 ILPLRGKIMNVEKAHLDKVLNSEEIKNMITAFGTGI-GKEFDISKLRYGKIIIMTDADVD 509
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY K L DEG +YV +PPLY++ +GK+ +Y Y D E K +
Sbjct: 510 GAHIRTLLLTFFYRYMKDLIDEGHVYVALPPLYRISQGKKERYVYSDDEKDKYIKEL-GD 568
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV---VFSSLMGARVDTR 537
A + I R+KGLGEM QLWETT++P++R+L L +E+ E+ FS LMG +V+ R
Sbjct: 569 ATFKINRYKGLGEMNAEQLWETTMDPDRRVL--LRVEEDLESTTTDDTFSLLMGEKVEPR 626
Query: 538 KELIQNAANLV 548
+ IQ A V
Sbjct: 627 RNFIQENAKYV 637
>gi|352516178|ref|YP_004885495.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
gi|348600285|dbj|BAK93331.1| DNA gyrase subunit B [Tetragenococcus halophilus NBRC 12172]
Length = 649
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/537 (48%), Positives = 367/537 (68%), Gaps = 22/537 (4%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS+ LEV V+++G Y+Q++ RGK +T + + + QGT + F
Sbjct: 124 LHGVGSSVVNALSKKLEVKVYKNGQIYYQEFHRGK----VTGDLKVIGETELQGTEVHFE 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F ++F + +A RIRELAFLN L I++ ED PE+ Y + GG++ YV
Sbjct: 180 PDSEIFNETVEFSFDKLATRIRELAFLNRGLHISI--EDRRPEEPVVKNYHYEGGIKSYV 237
Query: 145 QWLNTDK-----KPLHDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 199
+ LN K +P++ + G ++D I +++++Q+ +D+Y ++ +AN+I T +GGTH
Sbjct: 238 EHLNASKDVLFPEPIY-LEGQQQD---INVEVSIQY-TDSYHTNLMTFANNIHTYEGGTH 292
Query: 200 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 259
G K +LTR +N G K K +K+ D +LSGE VREGLT ++SV+ P+P+FEGQTKT+LG
Sbjct: 293 EAGFKTALTRVINDYGHKQKLMKENDDNLSGEDVREGLTAVVSVKHPDPQFEGQTKTKLG 352
Query: 260 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 319
N EVR V D+ E+ ++L +P + I+ K + A KA AAKRAR++ R+K L S
Sbjct: 353 NSEVRTVTDRLFSEHFAKFLMENPSIGRRIVEKGMLASKARQAAKRAREVTRRKGALEIS 412
Query: 320 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 379
+LPGKLADCSS PE+SE+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ +
Sbjct: 413 NLPGKLADCSSRDPEKSELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKI 472
Query: 380 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 439
NEEI++L A+G G GE+F RYHK++I+TDADVDGAHIRTLLLT FYRY + +
Sbjct: 473 LANEEIRSLFTAMGTGF-GEEFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPV 531
Query: 440 FDEGCIYVGVPPLYKVERGKQVQYC----YDDAELKKVKSSFPSNALYSIQRFKGLGEMM 495
+ G +Y+ PPLY V++GK ++Y + + EL++V S P + S+QR+KGLGEM
Sbjct: 532 VEAGYVYIAQPPLYGVKQGKNIRYVQPGEHAEEELQEVIDSLPQSPKPSVQRYKGLGEMD 591
Query: 496 PVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
QLW+TT+NPE R++ ++ IEDA EA+ VF LMG V+ R+ I+ A+ V NLD
Sbjct: 592 EHQLWQTTMNPENRLMLRVSIEDAIEADQVFEMLMGDHVEPRRAFIEENAHYVQNLD 648
>gi|373498797|ref|ZP_09589298.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
gi|404367389|ref|ZP_10972756.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|313690309|gb|EFS27144.1| DNA gyrase, B subunit [Fusobacterium ulcerans ATCC 49185]
gi|371960408|gb|EHO78066.1| DNA gyrase, B subunit [Fusobacterium sp. 12_1B]
Length = 635
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/554 (48%), Positives = 372/554 (67%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE +VTV DG ++QKY+RG P
Sbjct: 92 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWTDVTVKTDGKIWYQKYNRGIP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT +RF D ++F T I +D+NT+ R++ELA+LN L I L
Sbjct: 150 EEDVKEIGVTTD----HGTSVRFKADHEIFETLI-YDYNTLKNRLKELAYLNKGLEIHLS 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-KKPLHDVVGFRKDVDGITIDLALQWCSDA 179
+P K + E+ F GG+ ++++ + + +K + + + +VD +T+D+A + +
Sbjct: 205 DSRKEPYKKE--EFKFEGGIVDFLKEITEETEKLIPEPIYMSGEVDNVTVDIAFLYTVNQ 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + + N+I T +GGTH+ G + +LTR +N +GK +K+KD L G +REG+T
Sbjct: 263 -AEVIYSFVNNINTHEGGTHVSGFRTALTRVINDVGKAQGYLKEKDGKLQGNDIREGVTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+VP P+FEGQTKT+LGN EV +V V L LE +P+ I+ K L++ KA
Sbjct: 322 IVSVKVPQPQFEGQTKTKLGNSEVTGIVSTLVGTNLKIVLEDNPNDTKIIIEKILNSKKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADCSS P+E EI+IVEGDSAGGSAKQGRDR Q
Sbjct: 382 REAAQKARELVLRKSVLEVGSLPGKLADCSSKNPDECEIYIVEGDSAGGSAKQGRDRSHQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +N E++ +I A G + G+ F E LRY KII++TDADV
Sbjct: 442 AILPLRGKILNVEKAGLHKSLENNEVRAMITAFGTSI-GDSFNIEKLRYGKIILMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YR+ L G +Y+ PPLYK+ GKQ++Y Y D ELK++ F
Sbjct: 501 DGAHIRTLLLTFIYRFMVDLIYNGNVYIAQPPLYKITTGKQIRYAYTDKELKEITDVFEG 560
Query: 480 NAL-YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y++QR+KGLGEM P QLW+TT+NP+ R L Q+ I+DA A+++F LMG +VD R+
Sbjct: 561 DDRKYTLQRYKGLGEMNPEQLWDTTMNPDTRTLLQVTIDDARAADMLFDKLMGDKVDPRR 620
Query: 539 ELI-QNAANLVNLD 551
E I +NA + NLD
Sbjct: 621 EFIEENAVYVKNLD 634
>gi|16802054|ref|NP_463539.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e]
gi|46906230|ref|YP_012619.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093016|ref|ZP_00230795.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858]
gi|47097288|ref|ZP_00234846.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854]
gi|226222645|ref|YP_002756752.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824774|ref|ZP_05229775.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194]
gi|254827430|ref|ZP_05232117.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254851836|ref|ZP_05241184.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503]
gi|254913117|ref|ZP_05263129.1| DNA gyrase subunit B [Listeria monocytogenes J2818]
gi|254930863|ref|ZP_05264222.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262]
gi|254937498|ref|ZP_05269195.1| DNA gyrase subunit B [Listeria monocytogenes F6900]
gi|254994017|ref|ZP_05276207.1| DNA gyrase subunit B [Listeria monocytogenes FSL J2-064]
gi|255520064|ref|ZP_05387301.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-175]
gi|284803260|ref|YP_003415125.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578]
gi|284996401|ref|YP_003418169.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923]
gi|300763380|ref|ZP_07073378.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017]
gi|386042353|ref|YP_005961158.1| DNA gyrase subunit B [Listeria monocytogenes 10403S]
gi|386045640|ref|YP_005963972.1| B subunit [Listeria monocytogenes J0161]
gi|386048936|ref|YP_005966927.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-561]
gi|386052279|ref|YP_005969837.1| DNA gyrase subunit B [Listeria monocytogenes Finland 1998]
gi|386730767|ref|YP_006204263.1| DNA gyrase subunit B [Listeria monocytogenes 07PF0776]
gi|404279558|ref|YP_006680456.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2755]
gi|404282436|ref|YP_006683333.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2372]
gi|404285373|ref|YP_006691959.1| DNA gyrase subunit B [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404409245|ref|YP_006694833.1| DNA gyrase subunit B [Listeria monocytogenes SLCC5850]
gi|404412112|ref|YP_006697699.1| DNA gyrase subunit B [Listeria monocytogenes SLCC7179]
gi|405748341|ref|YP_006671807.1| DNA gyrase subunit B [Listeria monocytogenes ATCC 19117]
gi|405751210|ref|YP_006674675.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2378]
gi|405754085|ref|YP_006677549.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2540]
gi|405756993|ref|YP_006686269.1| DNA gyrase subunit B [Listeria monocytogenes SLCC2479]
gi|406702781|ref|YP_006753135.1| DNA gyrase, B subunit [Listeria monocytogenes L312]
gi|417314056|ref|ZP_12100762.1| DNA gyrase subunit B [Listeria monocytogenes J1816]
gi|424712856|ref|YP_007013571.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
LL195]
gi|424821659|ref|ZP_18246672.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A]
gi|21328234|gb|AAM48481.1|AF084042_1 DNA gyrase subunit B [Listeria monocytogenes]
gi|16409365|emb|CAC98221.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e]
gi|46879494|gb|AAT02796.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 4b str.
F2365]
gi|47014333|gb|EAL05308.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854]
gi|47018584|gb|EAL09338.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858]
gi|225875107|emb|CAS03795.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258599808|gb|EEW13133.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258605128|gb|EEW17736.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503]
gi|258610100|gb|EEW22708.1| DNA gyrase subunit B [Listeria monocytogenes F6900]
gi|284058822|gb|ADB69763.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578]
gi|284061868|gb|ADB72807.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923]
gi|293582408|gb|EFF94440.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262]
gi|293591119|gb|EFF99453.1| DNA gyrase subunit B [Listeria monocytogenes J2818]
gi|293594013|gb|EFG01774.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194]
gi|300515657|gb|EFK42706.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017]
gi|328468327|gb|EGF39333.1| DNA gyrase subunit B [Listeria monocytogenes J1816]
gi|332310339|gb|EGJ23434.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A]
gi|345532631|gb|AEO02072.1| B subunit [Listeria monocytogenes J0161]
gi|345535587|gb|AEO05027.1| DNA gyrase, B subunit [Listeria monocytogenes 10403S]
gi|346422782|gb|AEO24307.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-561]
gi|346644930|gb|AEO37555.1| DNA gyrase, B subunit [Listeria monocytogenes Finland 1998]
gi|384389525|gb|AFH78595.1| DNA gyrase subunit B [Listeria monocytogenes 07PF0776]
gi|404217541|emb|CBY68905.1| DNA gyrase, B subunit [Listeria monocytogenes ATCC 19117]
gi|404220410|emb|CBY71773.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2378]
gi|404223285|emb|CBY74647.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2540]
gi|404226193|emb|CBY47598.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2755]
gi|404229071|emb|CBY50475.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC5850]
gi|404231938|emb|CBY53341.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2372]
gi|404234875|emb|CBY56277.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC2479]
gi|404237811|emb|CBY59212.1| DNA gyrase, B subunit [Listeria monocytogenes SLCC7179]
gi|404244302|emb|CBY02527.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406359811|emb|CBY66084.1| DNA gyrase, B subunit [Listeria monocytogenes L312]
gi|424012040|emb|CCO62580.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str.
LL195]
gi|441469553|emb|CCQ19308.1| DNA gyrase subunit B [Listeria monocytogenes]
gi|441472685|emb|CCQ22439.1| DNA gyrase subunit B [Listeria monocytogenes N53-1]
Length = 646
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS SLEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+FT +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEEQ----GETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDYLASLDG 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ YSIQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LIQNAANLV-NLD 551
I++ A V NLD
Sbjct: 633 FIEDNAQYVKNLD 645
>gi|313887747|ref|ZP_07821429.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846356|gb|EFR33735.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 637
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/556 (48%), Positives = 386/556 (69%), Gaps = 18/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF +S Y VSGGLHGVG+SVVNALS L TV R+G Y Q+++RG
Sbjct: 96 VLTILHAGGKF--DNSAYKVSGGLHGVGVSVVNALSNKLVATVKRNGKIYRQEFARGIRK 153
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L V+ + D GT I F PD +F T ++F +A R RE+AFLN + I
Sbjct: 154 SDL--EVIGETNTDETGTTIYFEPDDTIFET-VEFSDEVLAKRFREMAFLNKGIKIEFID 210
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E D NE F + GG++ +V+++N KKP+HD + + ++ + +++A+Q+ +D+
Sbjct: 211 ERKD-----LNEVFHYEGGIKSFVEFINAKKKPVHDEIIYIDEIREETAVEIAIQY-TDS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+I T +GGTH+ G +++LTRTLN G+K+ +K+K+ +LSGE VREG++
Sbjct: 265 YSEVVLSFANNINTEEGGTHLSGFRSALTRTLNDYGRKNNIIKEKEENLSGEDVREGISA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++P+P+FEGQTK +LGN E R +VD + E L +LE +P V IL K+LSA +A
Sbjct: 325 VISVKLPDPQFEGQTKGKLGNSETRGIVDSVLSEDLAVFLEENPRVGKQILDKALSARRA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+ L S +LPGKLADC + P+ +EIF+VEG+SAGGSAK GRD +Q
Sbjct: 385 REAARKARDLTRKKNNLESMTLPGKLADCQNDDPKRNEIFLVEGNSAGGSAKDGRDSAYQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ M + EI+ +I A G G+ GE+F E LRY KIII+TDADV
Sbjct: 445 AILPLRGKIMNVEKARLDRMLNSSEIRAMITAFGTGI-GEEFDLEKLRYDKIIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDDAELKKVKSSFP 478
DGAHI TLLLTFF+RY K L +EG +YV PLY +E+G ++ +YC+++ EL+ +
Sbjct: 504 DGAHIMTLLLTFFFRYMKPLIEEGHVYVAQAPLYGIEKGTKILRYCHNEKELRLALKEYK 563
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ + +I+R+KGLGEM P QLWETT+NP+ R+L ++ I+D AEA+ FS LMG V+ R+
Sbjct: 564 DSKV-NIKRYKGLGEMDPEQLWETTMNPDNRLLLKVNIDDLAEADDTFSILMGTEVEPRR 622
Query: 539 ELIQNAANLVNLDHLD 554
+ I N V D++D
Sbjct: 623 DFI--TENAVYADYID 636
>gi|336397547|ref|ZP_08578347.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
gi|336067283|gb|EGN55917.1| DNA gyrase subunit B [Prevotella multisaccharivorax DSM 17128]
Length = 657
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/568 (46%), Positives = 382/568 (67%), Gaps = 26/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF +S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKNS--YKVSGGLHGVGVSCVNALSTRMKSQVYRDGHIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D++GTR +FWPD +FTT F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKM----IGDTDKRGTRQQFWPDPTIFTTTT-FQWDIVARRMRELAYLNAGIKITLT 210
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + + F GL+E+V++++ ++ L D V+ + + G+ I++A+ + +
Sbjct: 211 DLRPDPETGKTRQEVFHAKDGLKEFVRYIDRHRQHLFDDVIYLKTEKQGVPIEVAIMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS----KTVKDKDISLSGEHV 233
D YS+ + Y N+I TI+GGTH+ G + +LTR + + K ++ I ++ E
Sbjct: 271 D-YSENLHSYVNNINTIEGGTHVTGFRMALTRVMKNYADNDPQIRKQIEKAKIEVASEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V+Q+V E LT YLE HPD I K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTNYLEEHPDEAHKICEKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++KSV+ S LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARIAARKARESVQRKSVMGGSGLPGKLADCSNRDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED ++ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDDREANIDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDD 467
KIII+TDADVDG+HI TL++T F+R+ + +EG +Y+ PPLYK + K QYCY+D
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFFRFMPKVIEEGHLYIATPPLYKCTFKSKISQYCYND 569
Query: 468 ----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
A L K + ++++ QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AAEA+
Sbjct: 570 QQRQAFLDKYGNGQEGTSIHT-QRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAAEAD 628
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I++ A N+D
Sbjct: 629 EIFSMLMGDDVEPRREFIEDNAAYANID 656
>gi|225386349|ref|ZP_03756113.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
gi|225047531|gb|EEG57777.1| hypothetical protein CLOSTASPAR_00093 [Clostridium asparagiforme
DSM 15981]
Length = 638
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/555 (49%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V+ DG Y Q+Y RGK
Sbjct: 92 VVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYLDGNIYQQRYERGKV 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L ++ GT +RF PDK++F +FD++T+ R+RE AFL L I LR
Sbjct: 150 MYPL--KIVGKCEPHEHGTHVRFLPDKEIFEET-EFDYDTLKIRLRETAFLTKNLKITLR 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
D E+ + + + GG+ E+V +LN K PL++ V + + +G+ ++++LQ +D+
Sbjct: 207 --DDREEEVKEKTFHYEGGIREFVAYLNKGKTPLYEQVIYCEGTREGVYVEVSLQH-NDS 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH+ G K +LT+T N +K+K +K+ + SLSGE +REGLT
Sbjct: 264 YTEGIYTFVNNINTPEGGTHLTGFKNALTKTFNDYARKNKLLKENEDSLSGEDIREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ +P+FEGQTK +LGN E R VD V E LT +LE +P V SI KS+ A +A
Sbjct: 324 IISVKIEDPQFEGQTKQKLGNSEARTAVDNVVSEQLTYFLEQNPSVAKSICEKSILAQRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS L +LPGKLADCS P EI+IVEGDSAGGSAK R R Q
Sbjct: 384 RAAARKARDLTRRKSALDGVALPGKLADCSDKNPVNCEIYIVEGDSAGGSAKTARSRATQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKIII+TDADV
Sbjct: 444 AILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-EDFDITKLRYHKIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K++ Y Y D EL + +
Sbjct: 503 DGAHISTLLLTFLYRFMPELIKQGYVYLAQPPLYKVEKNKRIWYAYSDEELNSILTDVGR 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED--AAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM QLWETT++PE+R+L ++ ++D +E ++ F++LMG +V+ R
Sbjct: 563 DGNNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDDETQSELDLTFTTLMGDQVEPR 622
Query: 538 KELIQ-NAANLVNLD 551
+E I+ NA + NLD
Sbjct: 623 REFIESNAKRVQNLD 637
>gi|313147892|ref|ZP_07810085.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423281169|ref|ZP_17260080.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
gi|424665894|ref|ZP_18102930.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|313136659|gb|EFR54019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574147|gb|EKA78898.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 616]
gi|404583333|gb|EKA88014.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 610]
Length = 652
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/559 (46%), Positives = 374/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
V V + D GT+ +FWPD +FT + +D+ +A R+RELA+LN L I+L R
Sbjct: 160 A----VKEVGTADHTGTKQQFWPDDSIFTETV-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ ++ ++ GL E+V+++ + ++ L +DV+ + I I++A+ + +
Sbjct: 215 RVINEDGSFKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I +SG+ REGLT
Sbjct: 274 FSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKIEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|402304103|ref|ZP_10823182.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
gi|400376029|gb|EJP28922.1| DNA gyrase, B subunit [Selenomonas sp. FOBRC9]
Length = 684
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 376/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S++V V RDG Y ++RG
Sbjct: 143 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSSSMDVQVRRDGHIYEISFARGN- 199
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
TT H + + + GTR+ F PD ++FT + T+ R+RELAFLN +TI L
Sbjct: 200 -TTEKLH--EIGTSETTGTRVHFVPDPEIFTVTT-YSFETLKHRLRELAFLNHGITITLT 255
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + +++ + F GG+ +V LN K+ +++ + F D +++A+Q+ +D+
Sbjct: 256 DERGEELRSE--TFHFDGGIRSFVSHLNRKKETINEEPIYFNGVKDDTVVEIAMQY-NDS 312
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N ++ +K+KD +LSGE VREGLT
Sbjct: 313 YQENIYSFVNNINTEEGGTHLAGFKIALTRAANDFARRLSVLKEKDGNLSGEDVREGLTA 372
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V P+FEGQTKT+LGN EVR +VD V E LTEY E +P+V +L K+L A +A
Sbjct: 373 VISLKVREPQFEGQTKTKLGNSEVRGIVDSIVTEGLTEYFEENPNVTKKVLDKALMASRA 432
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS P++ EI+IVEGDSAGGSAKQGRDRRFQ
Sbjct: 433 REAARKARELTRRKNALEVSSLPGKLADCSVKDPDQCEIYIVEGDSAGGSAKQGRDRRFQ 492
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ GE+F RY KIII+TDADV
Sbjct: 493 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGI-GEEFDLSKRRYSKIIIMTDADV 551
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D G +Y+ PPLY++ + K+ Y Y D E K
Sbjct: 552 DGAHIRTLLLTFFYRYMRPLVDHGHVYIAQPPLYQIRKDKKHFYTYTDEEQAKKLDEIGR 611
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + +IQR+KGLGEM P QLWETT+NP +R + ++ EDA A+ +F+ LMG +V+ R++
Sbjct: 612 DGV-TIQRYKGLGEMNPEQLWETTMNPSERTMLRVAAEDAEAADELFTILMGDKVEPRRQ 670
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 671 FIEENARLVRNLD 683
>gi|302344968|ref|YP_003813321.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
gi|302149978|gb|ADK96240.1| DNA gyrase, B subunit [Prevotella melaninogenica ATCC 25845]
Length = 657
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/567 (46%), Positives = 381/567 (67%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD ++FTT + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETDKTGTRQQFWPDPEIFTTTV-YQWAIVARRMRELAYLNAGIKITLS 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + I I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKTYADNDPQISKQLEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVNEYCYTEQ 569
Query: 469 ELKKVKSSFPSNA----LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
+ + + + A QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFIDKYANGAEDAKAIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEKNATYANID 656
>gi|293370455|ref|ZP_06617008.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
gi|292634447|gb|EFF52983.1| DNA gyrase, B subunit [Bacteroides ovatus SD CMC 3f]
Length = 652
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/559 (46%), Positives = 376/559 (67%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I+L R
Sbjct: 160 S----VKEVGTADITGTRQQFWPDGTIFTETV-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQVIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|379794532|ref|YP_005324530.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356871522|emb|CCE57861.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 644
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSQDLEVYVHRNEAIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 159 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTIYNYETLQQRIRELAFLNKGIQITLR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D + + + Y + GG++ YV+ LN K+P+HD + + D I +++A+Q+ S
Sbjct: 215 DE-RDEDNIREDSYHYEGGIKSYVELLNEKKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G SK +K+ LSGE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSKIMKEDKDRLSGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 333 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL+K+KS
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELEKLKSELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|190710549|gb|ACE95105.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/548 (50%), Positives = 373/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNA S LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNAPSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|237720397|ref|ZP_04550878.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262405441|ref|ZP_06081991.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|294646223|ref|ZP_06723877.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|298480563|ref|ZP_06998760.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|336404477|ref|ZP_08585172.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|345510630|ref|ZP_08790194.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|423214870|ref|ZP_17201398.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
gi|229442648|gb|EEO48439.1| DNA gyrase, B subunit [Bacteroides sp. D1]
gi|229450148|gb|EEO55939.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4]
gi|262356316|gb|EEZ05406.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22]
gi|292638441|gb|EFF56805.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a]
gi|295086258|emb|CBK67781.1| DNA gyrase subunit B [Bacteroides xylanisolvens XB1A]
gi|298273384|gb|EFI14948.1| DNA gyrase, B subunit [Bacteroides sp. D22]
gi|335942274|gb|EGN04121.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_30]
gi|392692133|gb|EIY85371.1| DNA gyrase, B subunit [Bacteroides xylanisolvens CL03T12C04]
Length = 652
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/559 (46%), Positives = 376/559 (67%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I+L R
Sbjct: 160 S----VKEVGTADITGTRQQFWPDGTIFTETV-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKSEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPSKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQVIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|448323114|ref|ZP_21512578.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
gi|445600300|gb|ELY54313.1| DNA gyrase subunit B [Natronococcus amylolyticus DSM 10524]
Length = 643
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/548 (48%), Positives = 369/548 (67%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGAVFRHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + +D + GT + FWPD VF T F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RARDMDDDEETGTEVTFWPDTDVFETR-DFSFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 KEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCS 177
E + E + E Y + GG+ E+V++LN + +HD V + +D D I +++A+Q
Sbjct: 210 DERQETEDGEVIEETYEYEGGIREFVEYLNETRSVMHDDVIYFEDEDQNIQVEVAMQATE 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D D +L+GE +REGL
Sbjct: 270 DLQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYGNENNLLGDIDGNLTGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+ K++ A
Sbjct: 329 TAVISVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHEQLGTYFEEHPDTAQAIVLKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNPE 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII+ TDA
Sbjct: 449 FQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + DAE ++
Sbjct: 508 DVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAERDEIVEEV 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPTQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 628 KQFIKDHA 635
>gi|448311928|ref|ZP_21501681.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
gi|445603549|gb|ELY57511.1| DNA gyrase subunit B [Natronolimnobius innermongolicus JCM 12255]
Length = 643
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/548 (47%), Positives = 372/548 (67%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGSVHRHAFEGGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V +++ + GT++RFWPD +F T F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDMQ-EVREMNADEETGTQVRFWPDTSIFETE-GFSFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+E++D + Y + GG+ E+V++LN + +HD V+ F + I I++A+Q +
Sbjct: 210 DEREETDDGDVVEDTYEYEGGIREFVKYLNETRSAMHDDVIYFEDEAQNIQIEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTRT+N K + + D + +L GE +REGL
Sbjct: 269 EELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAKDNDMLGDLETNLKGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I++K++ A
Sbjct: 329 TAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAQAIVTKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++A +L R+KS L S+SLPGKLADC + PE +E+FI EGDSAGGSAKQ RD
Sbjct: 389 KARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPETAELFIAEGDSAGGSAKQARDPE 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 449 FQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + D E ++ +
Sbjct: 508 DVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDTERDEIVAEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ +EDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITVEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I+ A
Sbjct: 628 KQFIKENA 635
>gi|383111025|ref|ZP_09931843.1| DNA gyrase, B subunit [Bacteroides sp. D2]
gi|313694595|gb|EFS31430.1| DNA gyrase, B subunit [Bacteroides sp. D2]
Length = 652
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/559 (47%), Positives = 371/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRDGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I L
Sbjct: 160 S----VKEVGTADITGTRQQFWPDNTIFTETV-YDYKILASRLRELAYLNAGLRITLTDR 214
Query: 123 DSDPEKNQYN--EYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
E + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKGEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDATKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ +++EI+N+ ALG+ + E+ KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTEEDSKEANIQKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|145218835|ref|YP_001129544.1| DNA gyrase subunit B [Chlorobium phaeovibrioides DSM 265]
gi|145204999|gb|ABP36042.1| DNA gyrase subunit B [Chlorobium phaeovibrioides DSM 265]
Length = 642
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/554 (47%), Positives = 370/554 (66%), Gaps = 23/554 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T++ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG + Q+Y RG P
Sbjct: 101 LVMTLIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAWFQRYHRGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + +GT+ F PD ++F +F + I R+RELAFLN L I ++
Sbjct: 159 ----EGDVKEIGATSERGTKTTFMPDPEIFKVT-EFRKDIIIDRMRELAFLNSNLKIVVQ 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQW 175
+ + E + F GGL+E+V + LN K+P++ + G + D +++ALQ+
Sbjct: 214 DIEGEQET-----FHFEGGLKEFVLFTDANRLNLIKEPVY-IYG---EKDSTIVEIALQY 264
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D+Y + + Y N+I T +GGTH+ G + +LTRTLNS +K+ +K+ ++L+G+ +E
Sbjct: 265 -NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNSYAQKNDLLKNLKLALTGDDFKE 323
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+V P+FEGQTKT+LGN E + +V+ + E L+++ E +P+V+ I+ K
Sbjct: 324 GLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESVLNEQLSDFAESNPNVIKMIIEKVKG 383
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGRD
Sbjct: 384 AAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRD 443
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R FQAILPL+GKILNVE+ + +NEEI+ +I ALG E+F +E LRY KIII+T
Sbjct: 444 RSFQAILPLKGKILNVEKARLHKLLENEEIKTIILALGTNFGEEEFSQEKLRYGKIIIMT 503
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFF+R+ ++L + G +Y+ PPLY V+ GK QY +DD E +
Sbjct: 504 DADVDGAHIRTLLLTFFFRHMRSLIEAGKVYIAQPPLYLVKAGKDQQYAWDDEERNSIAD 563
Query: 476 SF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
A IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+LMG +V
Sbjct: 564 MMRKGKANVHIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVSVENAMEADKVFSTLMGDKV 623
Query: 535 DTRKELIQNAANLV 548
+ R+E I+ A V
Sbjct: 624 EPRREFIEKNARYV 637
>gi|357056605|ref|ZP_09117644.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
gi|355379970|gb|EHG27117.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
Length = 637
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/555 (48%), Positives = 376/555 (67%), Gaps = 14/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q+Y RGK
Sbjct: 92 VVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVYKDGNIYQQRYERGK- 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T ++ ++ GT++ F PDK++F + +D++T+ R+RE AFL L I L+
Sbjct: 149 -VTYPLKIVGKCGPEQHGTKVTFLPDKEIFEETV-YDYDTLKIRLRETAFLTKNLKIILK 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
D+ EK + + + GG++E+V +LN K P++D V + + +G+ +++++Q +D+
Sbjct: 207 --DNREEKKE-KVFHYEGGIKEFVTYLNRGKTPIYDQVIYCEGTREGVYVEVSMQH-NDS 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH+ G K +LT+T N ++ K +KD + +LSGE +REGLT
Sbjct: 263 YTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYAREKKLLKDSEDNLSGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ +P+FEGQTK +LGN E R VD V E LT +LE +P V SI KS+ A +A
Sbjct: 323 IISVKIEDPQFEGQTKQKLGNSEARAAVDNIVSEQLTYFLEQNPAVAKSICEKSILAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK R R Q
Sbjct: 383 RAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKTARSRATQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +Y N EI+ +I A G G+ +DF LRYHKIII+TDADV
Sbjct: 443 AILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-DDFDISKLRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTF YR+ L +G +Y+ PPLYKVE+ K+V Y Y D EL +
Sbjct: 502 DGAHISTLLLTFIYRFMPELIKQGYVYLAQPPLYKVEKNKKVWYAYSDEELNSILMDIGR 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LMG +V+ R
Sbjct: 562 DNSNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDEETTSEVDLTFTTLMGDQVEPR 621
Query: 538 KELIQ-NAANLVNLD 551
+E I+ NA + NLD
Sbjct: 622 REFIEANAKKVKNLD 636
>gi|326799865|ref|YP_004317684.1| DNA gyrase B subunit [Sphingobacterium sp. 21]
gi|326550629|gb|ADZ79014.1| DNA gyrase, B subunit [Sphingobacterium sp. 21]
Length = 652
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/562 (47%), Positives = 387/562 (68%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
M++T+LHAGGKF + Y VSGGLHGVG+S VNALS L V R+G + Q+Y++GKP
Sbjct: 98 MVMTMLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTLLIAEVHREGKIFKQEYAQGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
+ + + DR GT + F PD +FT + ++T+AGR+RELA+LN +LT+
Sbjct: 156 LYDVKV----IGETDRTGTNVTFHPDPSIFTMTTTYSYDTLAGRLRELAYLNKGIRLTLL 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+E+ + ++ E++ GGL E+V++L+ +++PL D + GI ++LALQ+ +
Sbjct: 212 DEREEQEDGALRHEEFYSEGGLSEFVKFLDGNRQPLIPDPIHVEGIKQGIPVELALQY-N 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D YS+ + Y N+I TI+GGTH+ G + LTRTL + KS +K+ + ++G+ REGL
Sbjct: 271 DTYSENVHSYVNNINTIEGGTHVAGFRRGLTRTLKAYADKSGLLKNLKVEITGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VD +V E L YLE +P +I+ K + A
Sbjct: 331 TAVISVKVAEPQFEGQTKTKLGNNEVMGAVDVAVGEILGTYLEENPREAKAIVQKVIIAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++ARD+V++K+V+ S LPGKLADC++ P + EI++VEGDSAGG+AKQGR+R
Sbjct: 391 QARAAARKARDMVQRKTVMGGSGLPGKLADCANNDPAKCEIYLVEGDSAGGTAKQGRNRE 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EALRYHKIII 413
FQAILPLRGKILNVE+ E +Y+NEEI+N+ ALG+ + ED K E LRYH+III
Sbjct: 451 FQAILPLRGKILNVEKAMEHKIYENEEIKNMFTALGVSIGTPEDAKALNLEKLRYHRIII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD----AE 469
+TDADVDG+HI TL+LTF++RY K L + G +Y+ PPLY V++GK+ +Y +++ A
Sbjct: 511 MTDADVDGSHITTLILTFYFRYMKELIERGYVYIATPPLYLVKKGKEHEYAWNENQRLAA 570
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++++K + ++++ +QR+KGLGEM QLW+TT+NPE R L+Q+ IE+AAE + VFS L
Sbjct: 571 IQRLKGAGKEDSVH-VQRYKGLGEMNAEQLWDTTMNPETRTLRQVSIENAAECDRVFSML 629
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A +D
Sbjct: 630 MGDEVAPRREFIERNAKYAKID 651
>gi|222150258|ref|YP_002559411.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
gi|222119380|dbj|BAH16715.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402]
Length = 642
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/552 (48%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LEV V +DG YHQ Y RG P
Sbjct: 99 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSSTLEVYVHKDGKIYHQAYHRGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D+ GT IRF D ++FT ++++ + RIRELAFLN + + +
Sbjct: 157 AFDLKV----IGETDKTGTVIRFKADSEIFTETTEYEYEILQKRIRELAFLNKGIKLEI- 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
K++ + ++ +++ Y + GG++ YV+ LN K+ L + + + D I +++++Q+ ++
Sbjct: 212 KDEREQDEIRHDVYHYEGGIKSYVELLNKSKETLFPEPIYIHDNRDEIEVEISIQY-NNG 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS +L YAN+I T +GGTH +G K +LTR +NS G K+K +K+ D LSGE VREG+T
Sbjct: 271 YSTNLLSYANNIHTYEGGTHEDGFKRALTRVINSYGVKNKLIKEADEKLSGEDVREGITA 330
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ NP+FEGQTKT+LGN EVR++ D E +L +P + I+ K + A +A
Sbjct: 331 IVSIKHGNPQFEGQTKTKLGNTEVRQITDNLFAENFERFLLENPPIARIIVEKGIMASRA 390
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR++ R+KS L SSLPGKLADCSS P SE++IVEGDSAGGSAK GRD + Q
Sbjct: 391 RLAAKKAREVTRRKSGLEISSLPGKLADCSSKDPSISELYIVEGDSAGGSAKSGRDSKTQ 450
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A+G G+ GE F RYHKI+I+TDADV
Sbjct: 451 AILPLRGKILNVEKARLDRILGNNEIRSMITAMGTGIGGE-FDISKARYHKIVIMTDADV 509
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+KVE+GK+ Y Y++ EL K++ P+
Sbjct: 510 DGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKVEQGKKKYYVYNERELDKLRKELPT 569
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + R+KGLGEM QLWETT+NPE R + Q+ + DA EA+ VF LMG V+ R+
Sbjct: 570 TPKWQLARYKGLGEMNADQLWETTMNPEHRSMLQVTLSDAIEADEVFEMLMGDVVEHRRT 629
Query: 540 LIQNAANLVNLD 551
I+ A N+D
Sbjct: 630 FIEENAEYANVD 641
>gi|377832540|ref|ZP_09815498.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
gi|377553732|gb|EHT15453.1| DNA gyrase, B subunit [Lactobacillus mucosae LM1]
Length = 650
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 361/552 (65%), Gaps = 10/552 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFG S GY VSGGLHGVG SVVNALS L+V V R G EY+ + G
Sbjct: 106 VFTVLHAGGKFG--SGGYKVSGGLHGVGASVVNALSTELDVYVTRQGKEYYMDFDHGHVK 163
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T + V S+ + GTR+ F PD ++F ++ T+ RIREL+FLN L I +
Sbjct: 164 TPMKV-VKEGVSELKHGTRVHFKPDPEIFRETTVYNIKTLTDRIRELSFLNKGLKITI-- 220
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDAY 180
ED EK E+ + GG+ YV++LN ++ L D + + D GIT++++LQ+ + Y
Sbjct: 221 EDKREEKPTRQEFHYEGGIRHYVEFLNEGQEVLFDPPIYVEGEDKGITVEVSLQYTT-GY 279
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
T++ + N+I T +GGTH G K +LTR +N G+KS +K + +LSG+ VREGLT +
Sbjct: 280 RSTLMTFTNNIHTYEGGTHETGFKTALTRVINDYGRKSGQLKG-NTTLSGDDVREGLTAV 338
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN + R D E +L +PD I+ K + A KA
Sbjct: 339 VSIKHPDPQFEGQTKTKLGNSDARTATDHIFSEMFARFLMENPDTAHKIVEKGMLASKAR 398
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAKRAR++ R+KS L S LPGKLAD +S PE SE+FIVEGDSAGGSAKQGR R QA
Sbjct: 399 VAAKRAREVTRKKSGLEISRLPGKLADNTSKDPEISELFIVEGDSAGGSAKQGRSRLTQA 458
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + N+EI++L ALG G G DF YHK+II+TDADVD
Sbjct: 459 ILPIRGKILNVEKAGMDRILANDEIRSLFTALGTGFGG-DFDITKANYHKLIIMTDADVD 517
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLT FYRY K + G +Y+ PPLY+V +GK V+Y D EL+ V ++ +
Sbjct: 518 GAHIRTLLLTLFYRYMKPMITNGYVYIAQPPLYQVRQGKFVKYVESDEELQNVLNTLQPS 577
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
IQR+KGLGEM QLWETT++PE+R L ++ ++DAAEA +F LMG +V R+E
Sbjct: 578 PKPVIQRYKGLGEMDAEQLWETTMDPEKRHLLRVDLDDAAEAEKIFPMLMGTKVGPRREF 637
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 638 IEENAKFVENLD 649
>gi|118445175|ref|YP_879293.1| DNA gyrase subunit B [Clostridium novyi NT]
gi|118135631|gb|ABK62675.1| DNA gyrase, B subunit [Clostridium novyi NT]
Length = 637
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/554 (50%), Positives = 386/554 (69%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS+ V V RDG + Q Y +GK
Sbjct: 94 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSKECNVEVRRDGHIWSQNYKKGKV 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ LT V D GT + F PD ++F ++FD++T+A R+RELAFLN + I L
Sbjct: 152 VSELTI----VGDTDEHGTSVYFKPDDEIFE-EVEFDYSTLAQRLRELAFLNKGIKIILV 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E E+ +E+ + GG++ +V +LN +K+ LH + + + D +++ LQ+ +D
Sbjct: 207 DEREGNERR--DEFHYEGGIKSFVSFLNRNKQTLHAEPIYVEGNKDDYLVEVGLQY-NDT 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T++GGTH+ G K +LTR LN ++ +K+ D +LSG+ REGLT
Sbjct: 264 YNENIFSFANNIDTVEGGTHLAGFKTALTRVLNDYARRYGFLKENDKNLSGDDTREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E ++ +LE +PD ++ KSL+A +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNTEVRGIVDSIVSERVSIFLEENPDTAKIVIEKSLTAARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KSVL S+SLPGKLADCSS P E EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 384 REAAKKARELTRRKSVLESTSLPGKLADCSSKDPSECEIYLVEGDSAGGSAKQGRDRRFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + +++I+ +I A G G+ G+DF E +RYH+III+TDADV
Sbjct: 444 AILPLRGKIMNVEKQRLDKILNSDQIRAMITAFGAGI-GKDFDIEKIRYHRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTFFYRY + L D G +Y+ PPLY+V++GK V Y Y D EL++V +
Sbjct: 503 DGAHIATLLLTFFYRYMRELVDGGHVYIAQPPLYQVKKGKSVNYAYSDNELQEVLAQIGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT+NPE R L ++ I+DA A+ VF+ LMG +V+ R+
Sbjct: 563 KDKNTEIQRYKGLGEMDAGQLWDTTMNPEHRTLVKVTIDDAMRADEVFTILMGDKVEPRR 622
Query: 539 ELI-QNAANLVNLD 551
E I +NA +VNLD
Sbjct: 623 EFIEENAKKVVNLD 636
>gi|189464548|ref|ZP_03013333.1| hypothetical protein BACINT_00891 [Bacteroides intestinalis DSM
17393]
gi|189438338|gb|EDV07323.1| DNA gyrase, B subunit [Bacteroides intestinalis DSM 17393]
Length = 653
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/561 (46%), Positives = 374/561 (66%), Gaps = 18/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + + D GTR +FWPD +FT + +++ +A R+RELA+LN + I L
Sbjct: 158 LYP----VKEIGTSDITGTRQQFWPDNTIFTDTV-YNYEILATRMRELAYLNAGIKITLT 212
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
D E N E F++ GL+E+V+++++ ++ L +DV+ + G +++A+ + +
Sbjct: 213 DLRVKDEENNAKMEIFYSEEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL +K ++ + ++G+ REGL
Sbjct: 273 -SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYADDNKMLEKAKVEIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP ++ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNSEVMGAVDQAVGEALNYYLEEHPKEAKMVVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGRDRR
Sbjct: 392 QARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRDRR 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+ + LRY K+I
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVNTEDSKEANIDKLRYKKVI 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + G +Y+ PPLY ++GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIRNGYLYIATPPLYLCKKGKVEEYCWTDQQRQK 571
Query: 473 VKSSF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
++ S + QR+KGLGEM P QLW TT+NPE RMLKQ+ IE+AAE + +FS LM
Sbjct: 572 FIDTYGGGSESAVHTQRYKGLGEMNPEQLWSTTMNPENRMLKQISIENAAEVDYIFSMLM 631
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 632 GEDVGPRREFIEKNATYANID 652
>gi|392970924|ref|ZP_10336322.1| DNA gyrase subunit B [Staphylococcus equorum subsp. equorum Mu2]
gi|392510926|emb|CCI59581.1| DNA gyrase subunit B [Staphylococcus equorum subsp. equorum Mu2]
Length = 640
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 370/553 (66%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V++D YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYKDNKIYHQAYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
L + D+ GT IRF D ++FT +++++T+ R RELAFLN ++I L
Sbjct: 155 QFDLKV----IGETDKPTGTVIRFKADPEIFTETTEYNYDTLQQRTRELAFLNKGISITL 210
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
R E E+ + + Y + GG++ YV+ LN K+PLHD + + D I +++ALQ+ +
Sbjct: 211 RDERE--EEVREDSYHYEGGIKSYVEMLNETKEPLHDEPIYVHESKDDIEVEIALQY-NK 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y+ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE REGLT
Sbjct: 268 GYATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGEDTREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++S++ +P+FEGQTKT+LGN EVR+VVD+ E +L +P V ++ KS+ A
Sbjct: 328 AVVSIKHSDPQFEGQTKTKLGNSEVRQVVDKLFAELFERFLYENPQVGRIVVEKSIMASH 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K GRD
Sbjct: 388 ARLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTKSGRDSET 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+++TDAD
Sbjct: 448 QAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKIVLMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL K+K
Sbjct: 507 VDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELDKLKEELD 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ VF LMG V+ R+
Sbjct: 567 PSPKWSISRYKGLGEMNADQLWETTMNPEHRALLQVSLEDAIEADQVFEMLMGDVVENRR 626
Query: 539 ELIQNAANLVNLD 551
+ I++ A NLD
Sbjct: 627 QFIEDNAVYANLD 639
>gi|342218811|ref|ZP_08711414.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
gi|341588758|gb|EGS32133.1| DNA gyrase, B subunit [Megasphaera sp. UPII 135-E]
Length = 640
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/554 (50%), Positives = 382/554 (68%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY +SGGLHGVG+SVVNALSE ++ V RDG + ++RG
Sbjct: 95 VVLTVLHAGGKFGGD--GYPISGGLHGVGISVVNALSEWTKIKVKRDGYLWDISFARGIT 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T+L P+ + GT + F PD ++F I +D +T+ R+RELAFLN L I L
Sbjct: 153 NTSL-VQERPLLDNEETGTEVHFKPDPEIFPD-IVYDFDTLKTRLRELAFLNKGLHITL- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
ED K++ EY + GGL +V++LNT+K+ +H VV F + + +D+A+Q+ +
Sbjct: 210 -EDKRI-KDKKEEYCYKGGLVSFVEFLNTNKENVHPTVVHFEGQKNQVIVDIAMQYNT-G 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L + N I T +GGTH+ G + +LTR +N + +K+ + +LSGE VREGLT
Sbjct: 267 YSENILTFVNDIFTEEGGTHLSGFRTALTRLINDYARNMGILKENEENLSGEDVREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+V P+FEGQTKT+LGN EV+ VVD + L E+ E HP +I++K++SA +A
Sbjct: 327 IVSVKVREPQFEGQTKTKLGNSEVKGVVDTIFSDGLREFFEEHPVEAKNIINKTISASRA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+L R+K+ L SSLPGKLADCS +EI++VEGDSAGGSAKQGRDR+FQ
Sbjct: 387 RQAARRARELTRRKNALEISSLPGKLADCSEKNSAYTEIYLVEGDSAGGSAKQGRDRKFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + NEEI+++I A G G+ GE+F RY KIII+TDADV
Sbjct: 447 AILPLRGKIINVEKARLDKILANEEIRSMITAFGTGI-GEEFDISKRRYDKIIIMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL-KKVKSSFP 478
DG+HIRTLLLTFFYR+ K L EG +Y+ PPLY+V +GKQV Y Y D E+ +K+
Sbjct: 506 DGSHIRTLLLTFFYRFMKPLITEGHVYIAQPPLYQVRKGKQVWYFYTDEEMNEKLDELGR 565
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+QR+KGLGEM P QLWETT++P+ R + ++ +EDA +A+ +FS LMG +V+ R+
Sbjct: 566 DTNNIVVQRYKGLGEMNPEQLWETTMDPQYRTMLKVELEDAIKADRIFSVLMGDKVEPRR 625
Query: 539 ELIQ-NAANLVNLD 551
+ IQ NA N+ NLD
Sbjct: 626 QFIQENAKNVRNLD 639
>gi|393786129|ref|ZP_10374267.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
gi|392660493|gb|EIY54105.1| DNA gyrase, B subunit [Bacteroides nordii CL02T12C05]
Length = 655
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/559 (47%), Positives = 372/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 105 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMISQVYRNGKIYQQEYEIGKPLY 162
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIALR 120
V V + GTR +FWPD +FT + + + +AGR+RELA+LN K+T+ R
Sbjct: 163 P----VKEVGESEHTGTRQQFWPDNTIFTETV-YKYEILAGRMRELAYLNAGIKITLTDR 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ +D K + ++ GL+E+V++L + + L +DV+ + GI I+LA+ + +
Sbjct: 218 RVVNDEGKFKQEIFYSEEGLKEFVRYLESSRDHLINDVIYLNTEKQGIPIELAIMYNT-G 276
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 277 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 336
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP I+ K + A A
Sbjct: 337 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALAYYLEEHPKEAKLIVDKVVLAATA 396
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 397 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQ 456
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A LRYHKIII+T
Sbjct: 457 AILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMT 516
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +
Sbjct: 517 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQAFID 576
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ IE+AAEA+ +FS LMG
Sbjct: 577 TYGGGSENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIENAAEADFIFSMLMGE 635
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 636 DVGPRREFIEENATYANID 654
>gi|435848705|ref|YP_007310955.1| DNA gyrase subunit B [Natronococcus occultus SP4]
gi|433674973|gb|AGB39165.1| DNA gyrase subunit B [Natronococcus occultus SP4]
Length = 641
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/546 (48%), Positives = 366/546 (67%), Gaps = 7/546 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVFRHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT IRFWPD +F +F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEDTGTEIRFWPDSDIFE-GDEFSFSTLSSRLRELAFLNSGVRITLR 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E + E Y + GG+ E+V++LN + +HD V+ F + I +++A+Q D
Sbjct: 210 DERQETEDAVAETYEYEGGIREFVEYLNETRAVMHDDVIYFEDEEQDIQVEVAMQATED- 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GGTH+ G K +LTR +N G + D D +L GE +REGLT
Sbjct: 269 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYGNDQGLLGDIDGNLKGEDIREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I+ K++ A KA
Sbjct: 329 VISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHERLGTYFEEHPDTAEAIVVKAVEAAKA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+ FQ
Sbjct: 389 RKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNPEFQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII+ TDADV
Sbjct: 449 AVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFNIDDVRYKKIIMATDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y PPLY+V + DAE ++
Sbjct: 508 DGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTDAERNEIVEEVCD 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QRFKGLGEM P QLWETT+NP+ R+LK++ +EDAA A+ +FS LMG V+ RK+
Sbjct: 568 GNPTQVQRFKGLGEMNPEQLWETTMNPDNRILKRITVEDAAAADKMFSVLMGDAVEPRKQ 627
Query: 540 LIQNAA 545
I++ A
Sbjct: 628 FIKDNA 633
>gi|190710575|gb|ACE95118.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae]
Length = 627
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/548 (50%), Positives = 373/548 (68%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P +WETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTLIWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|313674412|ref|YP_004052408.1| DNA gyrase subunit b [Marivirga tractuosa DSM 4126]
gi|312941110|gb|ADR20300.1| DNA gyrase subunit B [Marivirga tractuosa DSM 4126]
Length = 653
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/562 (47%), Positives = 374/562 (66%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVW-RDGMEYHQKYSRGK 59
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS L+ TV+ RDG Y Q+YS G
Sbjct: 99 VVMTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSTMLKATVYSRDGKIYEQEYSEGF 156
Query: 60 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
P V PV D GT+I+F PD +F +F + T+A R+RELA+LN + I L
Sbjct: 157 PKEP----VKPVGETDVTGTKIQFKPDASIFMET-EFKYETVASRLRELAYLNAGIKIKL 211
Query: 120 RKE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWC 176
+ D D + E FF+ GGL E+V++L+ ++ L + + +G+ + +AL +
Sbjct: 212 QDHRDKDENGDSKEENFFSEGGLLEFVEYLDVSREKLIPQPIYMEGEKNGVPVQVALNYN 271
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ +YS+ ++ Y N+I TI+GGTH+ G + +LTRTL S KS ++ + I ++G+ REG
Sbjct: 272 T-SYSENVVSYVNNINTIEGGTHVSGFRRALTRTLKSYADKSGLLEKQKIEITGDDFREG 330
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV+V P+FEGQTKT+LGN +V V+ V E L +LE +P +I+ K + A
Sbjct: 331 LTAIISVKVAEPQFEGQTKTKLGNSDVMGAVESCVSETLQYFLEENPKAAKTIVQKVILA 390
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR++V++K+V+ S LPGKLADCS P E+++VEGDSAGGSAKQGRDR
Sbjct: 391 AQARNAAKKAREMVQRKNVMSGSGLPGKLADCSEKDPSICELYLVEGDSAGGSAKQGRDR 450
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKII 412
FQAILPL+GKILNVE+ E +Y N+EI+N++ ALG+ ED +K E LRYHKI+
Sbjct: 451 NFQAILPLKGKILNVEKAQEHKIYDNDEIKNILTALGVRFGTEDDEKALNLEKLRYHKIV 510
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY-DDAELK 471
I+TDADVDG+HIRTL+LT F+RY + L D G +Y+ PPLY ++RGK +Y + +D ++
Sbjct: 511 IMTDADVDGSHIRTLILTLFFRYMRELIDMGYVYIAQPPLYLIKRGKTERYVFTEDERVE 570
Query: 472 KVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
VK P + +QR+KGLGEM P QLW TT++P R +KQ+ +E AAEA+ +FS L
Sbjct: 571 VVKEISPDGTEGAVHLQRYKGLGEMNPEQLWTTTMDPHTRKMKQVSVESAAEADHLFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A +D
Sbjct: 631 MGDEVPPRRDFIEKNAKYAKID 652
>gi|194335198|ref|YP_002016992.1| DNA gyrase subunit B [Pelodictyon phaeoclathratiforme BU-1]
gi|194307675|gb|ACF42375.1| DNA gyrase, B subunit [Pelodictyon phaeoclathratiforme BU-1]
Length = 649
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/558 (48%), Positives = 368/558 (65%), Gaps = 28/558 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V RDG Y Q++ RG P
Sbjct: 105 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVSRDGKLYFQRFERGVP 162
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + S D +GT+ F PD +F T + + I R+RELAFLN +L+I ++
Sbjct: 163 ----QGDVKVIGSSDHRGTKTTFLPDHLIFKTT-ELRKDIIIDRMRELAFLNKELSITVQ 217
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQ 174
+ + E F + GG++E+VQ+ LN K+P++ + G R D +++ALQ
Sbjct: 218 DTEG------FQEIFHYEGGIKEFVQFTDQNRLNLLKEPIY-LYGER---DSTIVEIALQ 267
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ +D Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL+G+ +
Sbjct: 268 Y-NDTYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLSLTGDDFK 326
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+V P+FEGQTKT+LGN E + +V+ + E L+E+ E +P+VL I+ K
Sbjct: 327 EGLTAVISVKVAEPQFEGQTKTKLGNSETQSIVETVINEQLSEFAESNPNVLKMIIEKVK 386
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A + AA+RA++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGR
Sbjct: 387 GAAMSREAARRAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGR 446
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DR FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+
Sbjct: 447 DRSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSVEKLRYGKIIIM 506
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV- 473
TDADVDGAHIRTLLLTFF+RY + L + G +++ PPLY V+ GK QY +DD E +
Sbjct: 507 TDADVDGAHIRTLLLTFFFRYMRALIEAGRVFIAQPPLYLVKSGKDQQYAWDDEERNSIS 566
Query: 474 ---KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
K A IQR+KGLGEM P QLW TT++P R L + +E+A EA+ VFS+LM
Sbjct: 567 DGMKKMQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLLVNVENAMEADQVFSTLM 626
Query: 531 GARVDTRKELIQNAANLV 548
G +V+ R+E I+ A V
Sbjct: 627 GDKVEPRREFIEKNARYV 644
>gi|325288206|ref|YP_004264387.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
gi|324963607|gb|ADY54386.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271]
Length = 645
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/556 (49%), Positives = 377/556 (67%), Gaps = 25/556 (4%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF G + Y VSGGLHGVG+SVVNALSE L+V V +G+ Y Q+YSRGKP+
Sbjct: 107 MTILHAGGKFSGDA--YKVSGGLHGVGMSVVNALSEWLKVEVKINGIRYQQEYSRGKPLY 164
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L K R GT+I F PD Q+F I +D+ + R++EL+FLN + IAL+ E
Sbjct: 165 DLKE---AGTYKGRTGTQISFKPDAQIFEDVI-YDYEVLEQRLKELSFLNKNIGIALKDE 220
Query: 123 DSDPEKNQYNEYF-FAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLALQWC 176
+ E F +GG+ +YV++LN +K KP++ F + +++A Q+
Sbjct: 221 RTGA-----GELFKHSGGIVDYVKYLNRNKDAIQPKPIY----FEAQKEENIVEIAFQY- 270
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D YS+ + YAN+I T +GGTH G KA+LTR +N +K+ +K + +LSGE VREG
Sbjct: 271 NDGYSENIYSYANNINTTEGGTHEAGFKAALTRVINDYARKNNILKANENNLSGEDVREG 330
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV+V P+FEGQTKT+LGN E+R +VD + + L+ + E +P V I+ K L A
Sbjct: 331 LTAIISVKVREPQFEGQTKTKLGNSEMRSIVDSILGDGLSTFCEENPSVAKKIVEKGLQA 390
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A +AA++ARDL R+K+ L S+SLPGKLADC+ + EI++VEGDSAGGSAKQGRD+
Sbjct: 391 TRARMAARKARDLTRRKNALDSTSLPGKLADCAWKEAQFCEIYLVEGDSAGGSAKQGRDQ 450
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+FQAILPLRGKILNVE+ + NEEI+ +I A+G G+ +DF E RY+KI+I+TD
Sbjct: 451 KFQAILPLRGKILNVEKARLDRILANEEIRAMITAMGTGI-SDDFNLEKARYNKIVIMTD 509
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDG+HIR LLLTFFYRY K L + +Y+ PPL+++++GK++QY Y D EL +
Sbjct: 510 ADVDGSHIRILLLTFFYRYMKPLLENNYVYIAQPPLFQIKKGKEIQYAYSDEELNHILEM 569
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ IQR+KGLGEM P QLWETT+NPE R + Q+ +EDA A +F+ MG +VD
Sbjct: 570 IGRERV-EIQRYKGLGEMNPEQLWETTMNPETRTILQVKMEDARRAEELFTIFMGDKVDP 628
Query: 537 RKELIQN-AANLVNLD 551
RKE IQ A ++ NLD
Sbjct: 629 RKEYIQKYAKDVKNLD 644
>gi|124485239|ref|YP_001029855.1| DNA gyrase subunit B [Methanocorpusculum labreanum Z]
gi|124362780|gb|ABN06588.1| DNA gyrase subunit B [Methanocorpusculum labreanum Z]
Length = 651
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 280/573 (48%), Positives = 380/573 (66%), Gaps = 36/573 (6%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS L V+RDG Y + +G
Sbjct: 92 VVMTVLHAGGKFDKNT--YQVSGGLHGVGVSVVNALSTRLTAEVYRDGNIYSMVFGKGVL 149
Query: 61 VTTLTC-------HVLPVDSKDRQG--------TRIRFWPDKQVFTTAIQFDHNTIAGRI 105
+ LT ++L D++G TRI F+PD +F T +FD++ +A R
Sbjct: 150 LQPLTSRPETDEEYLLRQKRLDKEGQPKETTTGTRITFYPDGSIFETT-EFDYDVLAHRF 208
Query: 106 RELAFLNPKLTIAL---RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD---VVG 159
RELA+LN L I + R DSD + + GGL ++V LN K+ LH V
Sbjct: 209 RELAYLNKGLEIHVEDHRTGDSDT-------FCYEGGLRQFVAHLNEGKELLHPEPIYVD 261
Query: 160 FRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSK 219
DV+ I +++ALQ+ +D Y + + Y NS+ T +GGTH+EG +++LTR +N++ +K
Sbjct: 262 KSDDVNKIEVEVALQY-NDTYGEILYTYVNSVNTREGGTHLEGFRSALTRAINNIAHANK 320
Query: 220 TVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYL 279
+K+ D+S+ GE VREGLT +ISV++ NP+FEGQTK RLGN V+ +VD + + LTE+
Sbjct: 321 HLKE-DVSVRGEDVREGLTAVISVKIANPQFEGQTKMRLGNSNVKGLVDSMMYQALTEFF 379
Query: 280 ELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIF 339
E +P V+ +I KSL A A AA+RA++L R+K+ L S LPGKLADCS P +SEI+
Sbjct: 380 EENPKVIAAIAKKSLDAANAREAARRAKELARRKTSLEMSGLPGKLADCSERDPAKSEIY 439
Query: 340 IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGE 399
IVEGDSAGGSAKQGRDR+FQAILPLRGKILNVE+ E KN EIQ LI A+G G G+
Sbjct: 440 IVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKALEHKALKNAEIQTLITAIGAGY-GD 498
Query: 400 DFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGK 459
F E RYH I+I+TDADVDGAHIR LLLTFFYR+ K L + G IY+ PPL+++ +GK
Sbjct: 499 KFDAERARYHHIVIMTDADVDGAHIRILLLTFFYRFMKPLVEMGYIYIAQPPLFRIAKGK 558
Query: 460 QVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDA 519
Q +Y Y + +++ + + + S+QR+KGLGEM QLW TT+NPE R+LKQ+ IEDA
Sbjct: 559 QEKYVYTEEDMRLAIAEYGEKGI-SVQRYKGLGEMNAGQLWNTTMNPEFRILKQVRIEDA 617
Query: 520 AEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
+ AN +F LMG V RK+ I+ +A + NLD
Sbjct: 618 SYANEIFEKLMGDDVMPRKDFIKRHAGEVKNLD 650
>gi|403045150|ref|ZP_10900628.1| DNA gyrase subunit B [Staphylococcus sp. OJ82]
gi|402765214|gb|EJX19298.1| DNA gyrase subunit B [Staphylococcus sp. OJ82]
Length = 640
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/553 (50%), Positives = 370/553 (66%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V++D YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYKDNKIYHQAYKKGIP 154
Query: 61 VTTLTCHVLPVDSKDR-QGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
L + D+ GT IRF D ++FT +++++T+ R RELAFLN ++I L
Sbjct: 155 QFDLKV----IGETDKPTGTVIRFKADPEIFTETTEYNYDTLQQRTRELAFLNKGISITL 210
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
R E E+ + + Y + GG++ YV+ LN K+PLHD + + D I +++ALQ+ +
Sbjct: 211 RDERE--EEVREDSYHYEGGIKSYVEMLNETKEPLHDEPIYVHESKDDIEVEIALQY-NK 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y+ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE REGLT
Sbjct: 268 GYATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGEDTREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++S++ +P+FEGQTKT+LGN EVR+VVD+ E +L +P V ++ KS+ A
Sbjct: 328 AVVSIKHSDPQFEGQTKTKLGNSEVRQVVDKLFAELFERFLYENPQVGRIVVEKSIMASH 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K GRD
Sbjct: 388 ARLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTKSGRDSET 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+++TDAD
Sbjct: 448 QAILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKIVLMTDAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL K+K
Sbjct: 507 VDGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELDKLKEELD 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +SI R+KGLGEM QLWETT+NPE R L Q+ +EDA EA+ VF LMG V+ R+
Sbjct: 567 PSPKWSISRYKGLGEMNADQLWETTMNPEHRALLQVSLEDAIEADQVFEMLMGDVVENRR 626
Query: 539 ELIQNAANLVNLD 551
+ I++ A NLD
Sbjct: 627 QFIEDNAVYANLD 639
>gi|302872928|ref|YP_003841561.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|307687881|ref|ZP_07630327.1| DNA gyrase subunit B [Clostridium cellulovorans 743B]
gi|302575785|gb|ADL49797.1| DNA gyrase, B subunit [Clostridium cellulovorans 743B]
Length = 636
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/557 (49%), Positives = 385/557 (69%), Gaps = 22/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE+ VTV DG + Q++ RG
Sbjct: 95 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSETCIVTVSIDGKIHRQEFHRGNV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + + GT + F PD ++F T ++FD++T+ R+RELAFLN + I++
Sbjct: 153 ATELEV----IGETEEHGTEVFFTPDHEIFET-LEFDYDTLVQRLRELAFLNKGINISI- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
D ++ + + + GG++ +V +LN +K+ L + G + D I +++ALQ+
Sbjct: 207 ---EDRRNDKSDSFHYDGGIKSFVSYLNRNKEALFPEPIYIEGIQND---ILVEIALQY- 259
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y + + +AN+I T +GGTH+ G K ++TR +N +K +K+ D +LSGE VREG
Sbjct: 260 NDTYQENIFSFANNIDTAEGGTHLAGFKNAMTRVINDYARKFGFLKENDKNLSGEDVREG 319
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P PEFEGQTKT+LGN EVR +VD + ++ +LE +P V I+ K+L+A
Sbjct: 320 LTAIISVKIPEPEFEGQTKTKLGNSEVRGIVDSILGGSVSTFLEENPSVGKIIVDKALTA 379
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR+L R+KS+L S+SLPGKLADCSS P E EI+IVEGDSAGGSAKQGR+R
Sbjct: 380 SRAREAAKKARELTRRKSILESTSLPGKLADCSSKDPSECEIYIVEGDSAGGSAKQGRNR 439
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
RFQAILPLRGKI+NVE++ + ++ I+++I A G G+ G+DF + LRYH+III+TD
Sbjct: 440 RFQAILPLRGKIMNVEKQRLDKILGSDTIRSMITAFGAGI-GKDFDLDKLRYHRIIIMTD 498
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV-KS 475
ADVDGAHIRTLLLTFFYRY + + ++G +Y+ PPLYKV R K+ Y Y+D ELK + K
Sbjct: 499 ADVDGAHIRTLLLTFFYRYMRDMIEKGHVYIAQPPLYKVSRNKKEWYAYNDDELKDILKD 558
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+ IQR+KGLGEM QLW+TT++PE R+L ++ + +A A+ +F+ LMG +V+
Sbjct: 559 IGGKDNSTVIQRYKGLGEMDAQQLWDTTMDPEHRLLLKVDMGEAMMADEIFTILMGEKVE 618
Query: 536 TRKELIQ-NAANLVNLD 551
R+E IQ NA N+VNLD
Sbjct: 619 PRREFIQENAKNVVNLD 635
>gi|254168966|ref|ZP_04875805.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|197622072|gb|EDY34648.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 648
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 285/571 (49%), Positives = 383/571 (67%), Gaps = 38/571 (6%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y ++GGLHGVG+ VVN LSE L+ + RDG Y Q Y RGKP
Sbjct: 95 VVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKAYIKRDGKIYFQWYERGKP 152
Query: 61 VTTLTCHVLPV------------DSKDRQ-----GTRIRFWPDKQVFTTAIQFDHNTIAG 103
C V V D D + GT IRF PD ++F T +F ++ +
Sbjct: 153 ----QCDVHVVGKIENGNFVWIEDGHDEKFKYSRGTYIRFKPDAEIFETT-EFKYSIVKK 207
Query: 104 RIRELAFLNPKLTIALRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFR 161
++R+LAFLN + IAL E S + E F + GG+ E+V++LN P+H DVV +
Sbjct: 208 KLRDLAFLNRGIEIALEDERSGKK-----EIFKYDGGIVEFVKFLNEGYNPIHRDVVYGK 262
Query: 162 KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV 221
+ DGI ++ A+Q+ +D+ S+ +L + N+I T++GGTH+ G +++LT+ +N K +
Sbjct: 263 DEQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVEGGTHVSGFRSALTKVINDFAKSRNLL 321
Query: 222 KDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLEL 281
K D SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V + L+ Y E
Sbjct: 322 KGID-SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSIVNKILSTYFEE 380
Query: 282 HPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIV 341
HPDV +I+SK+++A +A +AA++AR+L R+K L S LPGKLADCS PE +E+FIV
Sbjct: 381 HPDVATNIVSKAIAAARARIAARKARELARRKGYLESLDLPGKLADCSEENPERAELFIV 440
Query: 342 EGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDF 401
EGDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G GV+ EDF
Sbjct: 441 EGDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTGVR-EDF 499
Query: 402 KKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV 461
LRY KIII+TDADVDGAHIRTLLLTFFYRY L ++G IY+ PLY++++GK +
Sbjct: 500 DYSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMPELIEKGHIYIAQAPLYRIQKGKNI 559
Query: 462 QYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAE 521
Y Y D E ++ NA S+QRFKGLGEM P QLW+TT+NPE R L ++ IEDAAE
Sbjct: 560 YYVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMNPQQLWDTTMNPETRRLIRVTIEDAAE 616
Query: 522 ANVVFSSLMGARVDTRKE-LIQNAANLVNLD 551
A+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 617 ADRLFSILMGEQVGPRREFIIQHAKEVMNID 647
>gi|293376413|ref|ZP_06622647.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909]
gi|325839309|ref|ZP_08166775.1| DNA gyrase, B subunit [Turicibacter sp. HGF1]
gi|292644969|gb|EFF63045.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909]
gi|325490591|gb|EGC92906.1| DNA gyrase, B subunit [Turicibacter sp. HGF1]
Length = 639
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/529 (50%), Positives = 362/529 (68%), Gaps = 11/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALSE LEVTV R+G +Y Q + +G P+ L HV + D GT ++F
Sbjct: 119 LHGVGASVVNALSEYLEVTVSRNGKKYFQSFEKGTPMNEL--HV--IGESDTTGTEVKFK 174
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +D++ + RIRELAFLN L I L ED EK Q +E+ F GG+ EYV
Sbjct: 175 PDPEIFTETTVYDYDILRNRIRELAFLNKGLKITL--EDLRSEKPQRHEFHFEGGISEYV 232
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+LN +K+ +H DV+ + DGI++++A+Q+ + + + +AN+I T +GGTH G
Sbjct: 233 SFLNKNKEVIHEDVIYVEGERDGISVEIAMQYNT-GVAGNIYSFANNINTHEGGTHEAGF 291
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+A+LTR +NS KK+ +K D +L GE +REGLT IIS + P+P+FEGQTKT+LGN EV
Sbjct: 292 RAALTRIINSYAKKANLLKGDD-ALIGEDIREGLTAIISAKHPDPQFEGQTKTKLGNSEV 350
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R++ D E +L +P IL KSL A +A +AAKRAR++VR+KS L S
Sbjct: 351 RRIADNVFSEGFERFLMENPQAAKLILDKSLMAARARMAAKRAREMVRRKSPLESLGFKS 410
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC S SE+FIVEGDSAGGSAKQGRD +FQAILPLRGK+LNVE+ +Y N
Sbjct: 411 KLADCQSRDANISELFIVEGDSAGGSAKQGRDNKFQAILPLRGKVLNVEKARIDKVYANN 470
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+++I A+G GV G++F E RYHK++I+TDADVDGAHIRTLLLTFFYRY + L + G
Sbjct: 471 EIKSMIHAIGTGV-GDEFDIEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRPLIENG 529
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPL+K+ +GK+++Y Y EL+ V + + ++QR+KGLGEM QLWETT
Sbjct: 530 YVYIAQPPLFKISQGKRIEYAYSQEELEAVMETLSATPRPNVQRYKGLGEMNAEQLWETT 589
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
++PE R L Q+ ++DA EA+ +F LMG RV+ R+E I NA + NLD
Sbjct: 590 MDPEVRTLLQVTLDDAVEADEIFDMLMGDRVEPRREFIDANAKYVTNLD 638
>gi|110637817|ref|YP_678024.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406]
gi|110280498|gb|ABG58684.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406]
Length = 652
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/562 (46%), Positives = 380/562 (67%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++VTV+ G + Q+Y +G P
Sbjct: 99 VVLTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSTDMKVTVYSHGKVHQQEYKKGIP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D GT+++F PD +FT++ ++ + TIA R+REL+FLN + I L+
Sbjct: 157 ----QYDVKEIGESDLHGTKVQFLPDDTIFTSS-EYKYETIANRLRELSFLNKGIRITLQ 211
Query: 121 KEDS-DPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCS 177
D E E F + GGL E+V +L++ ++ L + + G I +++A+ + +
Sbjct: 212 DHRQVDAEGKSEIEMFHSEGGLREFVDYLDSTREKLIPTPLYMESDKGPIPVEVAMLYNT 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+YS+ + Y N+I TI+GGTH+ G + +LTRTL S KS ++ + ++G+ REGL
Sbjct: 272 -SYSENVFSYVNNINTIEGGTHVAGFRRALTRTLKSYADKSGMLEKLKMEVTGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN +V VDQ V E L YLE +P I+ K + A
Sbjct: 331 TAVISVKVQEPQFEGQTKTKLGNSDVMGAVDQVVGEMLNTYLEENPKEAKIIVQKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+VL S LPGKLADCS + PE+ E+++VEGDSAGGSAKQGRDR+
Sbjct: 391 QARNAARKAREMVQRKNVLSGSGLPGKLADCSESDPEKCELYLVEGDSAGGSAKQGRDRK 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
+ AILPLRGKILNVE+ E +Y+N+EI+N+I ALG+ E+ +K LRYHK+II
Sbjct: 451 YHAILPLRGKILNVEKAQEHRIYENDEIKNMITALGVSFGTEEGEKVLNLTKLRYHKVII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DAE 469
+TDAD+DG+HIRTL+LTFF+RY + L D G +Y+ PPLY V+RGK+ +YC+ +A
Sbjct: 511 MTDADIDGSHIRTLILTFFFRYMRALIDGGHVYIAQPPLYLVKRGKEEKYCWTEEQREAA 570
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+K++ +++ IQR+KGLGEM P QLW TT++PE+R LKQ+ +E AAEA+ +FS L
Sbjct: 571 VKELAKDGKEDSV-GIQRYKGLGEMNPEQLWSTTMDPEKRSLKQVSVESAAEADHLFSML 629
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A +D
Sbjct: 630 MGDEVAPRRDFIEKNARYAKID 651
>gi|190710563|gb|ACE95112.1| gyrase subunit B [Bacillus thuringiensis serovar entomocidus]
Length = 627
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/548 (50%), Positives = 372/548 (67%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPSVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGYIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++ A EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQGAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|359688817|ref|ZP_09258818.1| DNA gyrase subunit B [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418749228|ref|ZP_13305520.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
gi|418757357|ref|ZP_13313545.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384117028|gb|EIE03285.1| DNA gyrase, B subunit [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404276297|gb|EJZ43611.1| DNA gyrase, B subunit [Leptospira licerasiae str. MMD4847]
Length = 637
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/554 (47%), Positives = 372/554 (67%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSESLEV V+++G + QKYSRG P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSESLEVEVYQNGKIHQQKYSRGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + +GT +RF PD +FTT +F + + R RELAFLN L + ++
Sbjct: 153 LGPVNV----IGDTTERGTVVRFKPDATIFTTT-EFHFDVLTSRFRELAFLNKGLKLIVQ 207
Query: 121 -KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
K D EK+ E+ F GG+ +V++LN +K PLH + F ++ D + ++A+Q+ SD
Sbjct: 208 DKRKPDSEKH---EFLFDGGIVSFVEYLNENKHPLHKTIHFERNKDDVVAEIAIQY-SDT 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKT-VKDKDISLSGEHVREGLT 238
YS+ + + N+I GGTH+EG +A+LTRTLN KK + VK + +LSGE ++EG+T
Sbjct: 264 YSENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDQQLVKKQPTALSGEDLKEGIT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV++P P+F QTK +L N E++ ++ E L+ + E +P + IL K + + K
Sbjct: 324 AVISVKIPQPQFNSQTKEKLVNAEIKGIMQTLTGEGLSLFFEENPAITKKILEKCILSAK 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++ARDL R+KSVL LPGKLADCS P SE++IVEGDSAGGSAKQGRDR +
Sbjct: 384 AREAARKARDLTRRKSVLEGGGLPGKLADCSEKDPAASELYIVEGDSAGGSAKQGRDRHY 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + NEEI+ L+ ALG G+ ++F + RYHKI I+TDAD
Sbjct: 444 QAILPLKGKILNVEKARLDKILGNEEIRTLVSALGTGIGEDEFNVDKARYHKIFIMTDAD 503
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
+DG+HIRTLLLTFF+RY K + ++G +YV PPLY ++ GK Y + D E + S
Sbjct: 504 IDGSHIRTLLLTFFFRYMKPIIEKGFLYVAQPPLYLIKHGKTSTYLFSDKEKDEYLKSLG 563
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM P QLWETT++PE+R++ ++ ++D EA F+ LMG V+ R+
Sbjct: 564 TEKAV-IQRYKGLGEMNPEQLWETTMDPEKRVVLKVKLDDYVEAEDTFNILMGDEVNPRR 622
Query: 539 ELIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 623 RFIEVNAAKVANLD 636
>gi|218131840|ref|ZP_03460644.1| hypothetical protein BACEGG_03461 [Bacteroides eggerthii DSM 20697]
gi|317474545|ref|ZP_07933819.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
gi|217986143|gb|EEC52482.1| DNA gyrase, B subunit [Bacteroides eggerthii DSM 20697]
gi|316909226|gb|EFV30906.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA]
Length = 653
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/562 (46%), Positives = 378/562 (67%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V V + GTR +FWPD +FT + ++++ +A R+RELA+LN + I L
Sbjct: 158 LYS----VKEVGVTEITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNAGIKITLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
E Y + F GL+E+V+++++ ++ L +DV+ + G +++A+ + +
Sbjct: 213 DLRVKEEDGNYKQEIFYSVEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + +SG+ REGL
Sbjct: 273 -SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEISGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKESKMIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R
Sbjct: 392 QARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRT 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY K+I
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKVI 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + +G +Y+ PPLY +GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIQQGYLYIATPPLYLCTKGKVKEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ FS L
Sbjct: 572 FIDTYGGGSENAIHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEADYTFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|354582066|ref|ZP_09000969.1| DNA gyrase, B subunit [Paenibacillus lactis 154]
gi|353200683|gb|EHB66143.1| DNA gyrase, B subunit [Paenibacillus lactis 154]
Length = 636
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/557 (50%), Positives = 376/557 (67%), Gaps = 22/557 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSTKVVVQVKRDGHIYQQEYRRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + GT + F PD ++FT +FD+NT+ R+RELAFLN + + L
Sbjct: 153 QYDIKV----IGDTEETGTTVTFLPDPEIFTETTEFDYNTLLTRVRELAFLNKGIALTLT 208
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQW 175
E + ++YF + GG+ EYV++LN K+ LH+ V G R D I ++++LQ+
Sbjct: 209 DE-----RTGASDYFKYEGGIIEYVKFLNEKKEALHEEPIYVEGSR---DNIQVEISLQY 260
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD +LSG+ VRE
Sbjct: 261 -NDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKTGMIKDNSNNLSGDDVRE 319
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT IISV+VP P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V IL K+L
Sbjct: 320 GLTAIISVKVPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLQENPSVSRRILEKALQ 379
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +A AA++AR++ R+KS L S+LPGKLADCSS SE++IVEGDSAGGSAKQGRD
Sbjct: 380 ASRAREAARKAREMTRRKSALEVSALPGKLADCSSKDASISELYIVEGDSAGGSAKQGRD 439
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R FQAILPLRGKILNVE+ + N EI+ +I ALG G+ +DF RYHKIII+T
Sbjct: 440 RHFQAILPLRGKILNVEKARLDRILSNAEIRAIITALGTGI-ADDFDLSKARYHKIIIMT 498
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFFYRY + L + G IY+ PPL+K+ER K V+Y + E ++
Sbjct: 499 DADVDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQPPLFKIERNKVVRYAGSEKERDEIIK 558
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
F NA ++IQR+KGLGEM QLWETT++PE R + Q+ IEDA A+ +F +LMG V+
Sbjct: 559 EFGENAKFNIQRYKGLGEMNATQLWETTMDPESRTMLQVTIEDAMLADTLFDTLMGDNVE 618
Query: 536 TRKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 619 PRRDFIQEHAKSVRNLD 635
>gi|340759260|ref|ZP_08695832.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
gi|251835455|gb|EES63995.1| DNA gyrase, B subunit [Fusobacterium varium ATCC 27725]
Length = 635
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/554 (48%), Positives = 369/554 (66%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALS +VTV DG ++QKY+RG P
Sbjct: 92 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSLWTDVTVKTDGKIWYQKYNRGVP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + GT +RF D ++F T I +D+NT+ R++ELA+LN L I L
Sbjct: 150 ----EEDVKEIGVTTEHGTTVRFKADHEIFETLI-YDYNTLKNRLKELAYLNKGLEIHLS 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-KKPLHDVVGFRKDVDGITIDLALQWCSDA 179
+P K + E+ F GG+ ++++ + + +K + + + +VD + +D+A + +
Sbjct: 205 DSRKEPYKKE--EFKFEGGIVDFLKEITEETEKLIPEPIYMTGEVDNVAVDIAFLYTVNQ 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
S+ + + N+I T +GGTH+ G + +LTR +N +GK +K+KD L G +REG+T
Sbjct: 263 -SEIIYSFVNNINTHEGGTHVSGFRTALTRVINDVGKAQGYLKEKDGKLQGNDIREGVTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV+VP P+FEGQTKT+LGN EV +V V L LE +P+ I+ K L++ KA
Sbjct: 322 IVSVKVPQPQFEGQTKTKLGNSEVTGIVSTLVGTNLKIVLEDNPNDTKIIIEKILNSKKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADCSS P+E EI+IVEGDSAGGSAKQGRDR Q
Sbjct: 382 REAAQKARELVLRKSVLEVGSLPGKLADCSSKNPDECEIYIVEGDSAGGSAKQGRDRSHQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +N E++ +I A G + G+ F E LRY KII++TDADV
Sbjct: 442 AILPLRGKILNVEKAGLHKSLENNEVRAMITAFGTSI-GDSFNIEKLRYGKIILMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YR+ L G +Y+ PPLYK+ GKQ++Y Y D ELK++ F
Sbjct: 501 DGAHIRTLLLTFIYRFMVDLIYNGNVYIAQPPLYKITTGKQIRYAYSDRELKEITDVFEG 560
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y++QR+KGLGEM P QLWETT+NP+ R L Q+ I+DA A+++F LMG +VD R+
Sbjct: 561 DDKKYTLQRYKGLGEMNPEQLWETTMNPDTRTLLQVTIDDARAADMLFDKLMGDKVDPRR 620
Query: 539 ELI-QNAANLVNLD 551
E I +NA + NLD
Sbjct: 621 EFIEENAVYVKNLD 634
>gi|340347373|ref|ZP_08670482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433651140|ref|YP_007277519.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
gi|339609465|gb|EGQ14337.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella dentalis
DSM 3688]
gi|433301673|gb|AGB27489.1| DNA gyrase, B subunit [Prevotella dentalis DSM 3688]
Length = 657
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/567 (47%), Positives = 374/567 (65%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + DR+GTR +FWPD +FTT F + +A R+RELAFLN + I L
Sbjct: 156 LYPVKV----IGETDRRGTRQQFWPDAGIFTTTT-FQWDIVARRMRELAFLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + G+ I++A+ + +D
Sbjct: 211 DLRPNDEGKTRREVFHAKDGLKEFVRYIDRHRTHLFDDVIYLKTEKQGLPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G + +LTR L + SK ++ I ++GE R
Sbjct: 271 -YSENLHSYVNNINTIEGGTHVTGFRMALTRVLKNYADNDAQISKQIEKAKIEVAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTNYLEEHPVEAKQICEKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++KSV+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARVAARKARESVQRKSVMSGGGLPGKLADCSNKDPKQCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T F+R+ + +EG +Y+ PPLYK +GK +YCY+D
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFFRFMPKVIEEGHLYIATPPLYKCTYKGKVSEYCYNDQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K QR+KGLGEM P QLWETT++P QR+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFLDKYAGGVDDGKSIHTQRYKGLGEMNPEQLWETTMDPGQRLLKQVTIENAAQADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEENAAYANID 656
>gi|332685540|ref|YP_004455314.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|332369549|dbj|BAK20505.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
Length = 643
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/536 (48%), Positives = 358/536 (66%), Gaps = 20/536 (3%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS LE V+R+G Y+Q+Y RG V L + DR GT I F
Sbjct: 118 LHGVGSSVVNALSTKLEARVYRNGKIYYQEYHRGNVVADLKV----IGDTDRHGTAIHFI 173
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F I+F+ +A R+RELAFLN L I++ ED + +Y++ GG++ YV
Sbjct: 174 PDPEIFKETIEFNFEKLATRVRELAFLNRGLKISI--EDLRGPETVLRDYYYEGGIKSYV 231
Query: 145 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 200
LN +K L D V G +++ IT+++++Q+ +D Y +L +AN+I T +GGTH
Sbjct: 232 GHLNANKDVLFDEPIYVEGEQQE---ITVEVSMQY-TDGYHSNLLSFANNIHTYEGGTHE 287
Query: 201 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 260
G K +LTR +N KK K +K+ D +L+GE VREGLTC+IS++ P P+FEGQTKT+LGN
Sbjct: 288 AGFKTALTRVINDYAKKQKLMKENDENLTGEDVREGLTCVISIKHPEPQFEGQTKTKLGN 347
Query: 261 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 320
EVR V D+ E+ ++L +P + I+ K L A KA LAAKRAR++ R+K L S+
Sbjct: 348 SEVRTVTDRLFSEHFGKFLMENPTIGKKIVDKGLLASKARLAAKRAREVTRRKGNLEISN 407
Query: 321 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 380
LPGKLADCSS E+ E+FIVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ +
Sbjct: 408 LPGKLADCSSREAEKCELFIVEGDSAGGSAKQGRDRMFQAILPIRGKILNVEKASMDKIL 467
Query: 381 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 440
NEEI++L A+G G GEDF RYHK+II+TDADVDGAHIRTLLLT FYR+ + +
Sbjct: 468 ANEEIRSLFTAMGTGF-GEDFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPIV 526
Query: 441 DEGCIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMP 496
+ G +Y+ PPLY V++GK + Y + EL + + P + S+QR+KGLGEM
Sbjct: 527 EAGYVYIAQPPLYGVKQGKNITYVQPGKQAEEELSHLMETLPKSPKASVQRYKGLGEMDD 586
Query: 497 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
QLWETT++PE+R++ ++ ++DA A+ +F LMG +V+ R+ I+ A+ V NLD
Sbjct: 587 HQLWETTMDPERRLMSRVSVDDAVAADQIFEMLMGDKVEPRRAFIEENAHYVKNLD 642
>gi|53711588|ref|YP_097580.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60679839|ref|YP_209983.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|265764971|ref|ZP_06093246.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|336407776|ref|ZP_08588272.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|375356678|ref|YP_005109450.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|383116590|ref|ZP_09937338.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|423248251|ref|ZP_17229267.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|423253200|ref|ZP_17234131.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|423259366|ref|ZP_17240289.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|423263662|ref|ZP_17242665.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|423269860|ref|ZP_17248832.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|423272686|ref|ZP_17251633.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|423282448|ref|ZP_17261333.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
gi|52214453|dbj|BAD47046.1| DNA gyrase B subunit [Bacteroides fragilis YCH46]
gi|60491273|emb|CAH06021.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343]
gi|251948137|gb|EES88419.1| DNA gyrase, B subunit [Bacteroides sp. 3_2_5]
gi|263254355|gb|EEZ25789.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16]
gi|301161359|emb|CBW20899.1| DNA gyrase subunit B [Bacteroides fragilis 638R]
gi|335944855|gb|EGN06672.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_56FAA]
gi|387776946|gb|EIK39046.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T00C01]
gi|392657100|gb|EIY50737.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T12C07]
gi|392660358|gb|EIY53972.1| DNA gyrase, B subunit [Bacteroides fragilis CL03T00C08]
gi|392700706|gb|EIY93868.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T00C42]
gi|392707084|gb|EIZ00204.1| DNA gyrase, B subunit [Bacteroides fragilis CL07T12C05]
gi|392708600|gb|EIZ01706.1| DNA gyrase, B subunit [Bacteroides fragilis CL05T12C13]
gi|404582016|gb|EKA86711.1| DNA gyrase, B subunit [Bacteroides fragilis HMW 615]
Length = 652
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/559 (46%), Positives = 373/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
V V D GT+ +FWPD +FT I +D+ +A R+RELA+LN L I+L R
Sbjct: 160 P----VKEVGIADHTGTKQQFWPDDSIFTETI-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ ++ ++ GL E+V+++ + ++ L +DV+ + I I++A+ + +
Sbjct: 215 RVVNEDGSFKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|387789733|ref|YP_006254798.1| DNA gyrase subunit B [Solitalea canadensis DSM 3403]
gi|379652566|gb|AFD05622.1| DNA gyrase, B subunit [Solitalea canadensis DSM 3403]
Length = 653
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/562 (48%), Positives = 382/562 (67%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q+Y RGKP
Sbjct: 99 VVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKAEVHREGKVWVQEYERGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V V + GT + F PD ++FT ++++T+A R+RELA+LN +LT+
Sbjct: 157 ----QYDVKTVGETNITGTIVTFTPDTEIFTLTTIYNYDTLAARLRELAYLNKGIRLTLT 212
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+E +D N YF GGL+E++ +L+ +++PL + + + GI ++LALQ+ S
Sbjct: 213 DERETNDDGSYVVNSYFSEGGLKEFITYLDGNREPLIPEPIYIDGNKSGIPVELALQYNS 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
YS+ + Y N+I TI+GGTH+ G + LTRTL S +KS +K+ + ++G+ REGL
Sbjct: 273 -TYSENVHSYVNNINTIEGGTHVAGFRRGLTRTLKSYAEKSGLLKNLKVEITGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++SV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP I+ K + A
Sbjct: 332 TAVVSVKVAEPQFEGQTKTKLGNNEVIGAVDQAVGEILGVYLEEHPKEARLIVQKVVLAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++KSV+ S LPGKL+DCS+ PE E+++VEGDSAGG+AKQGRDR
Sbjct: 392 TARAAARKAREMVQRKSVMSGSGLPGKLSDCSNNDPEACELYLVEGDSAGGTAKQGRDRN 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EALRYHKIII 413
FQAILPL+GKILNVE+ E +Y+NEEI+N+ A+G+ + ED K E LRYHKIII
Sbjct: 452 FQAILPLKGKILNVEKAMEHKIYENEEIKNIFTAMGVSIGTPEDDKALNLEKLRYHKIII 511
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD----AE 469
+TDADVDG+HI TL+LTFF+RY K L ++G IY+ PPLY V++GK +Y + + A
Sbjct: 512 MTDADVDGSHITTLILTFFFRYMKALVEQGYIYIATPPLYLVKKGKDFEYAWTEEQRLAA 571
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+++VK + +++ +IQR+KGLGEM QLWETT+NP+ R L+Q+ IE+AAE + FS L
Sbjct: 572 IERVKGNGKEDSV-NIQRYKGLGEMNAEQLWETTMNPDTRTLRQVTIENAAECDHTFSVL 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A +D
Sbjct: 631 MGDEVAPRRDFIEKHAKYAKID 652
>gi|355674400|ref|ZP_09059585.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
gi|354813963|gb|EHE98566.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
Length = 637
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/555 (48%), Positives = 374/555 (67%), Gaps = 14/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFG + GY VSGGLHGVG SVVNALSE LEV V++DG Y Q+Y RGK
Sbjct: 92 VVFTILHAGGKFG--NGGYKVSGGLHGVGASVVNALSEWLEVQVFKDGNIYQQRYQRGK- 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T ++ ++ GT++ F PD ++F ++D++T+ R+RE AFL L I LR
Sbjct: 149 -VTYPLKIVGKCGPEQHGTKVTFLPDTEIFEET-EYDYDTLKIRLRETAFLTKNLRITLR 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
E E+ + + + GG++E+V +LN K PL++ V + + +G+ +++++Q +D+
Sbjct: 207 DE---REEKKEKTFHYEGGIKEFVTYLNKGKTPLYEQVIYCEGTKEGVFVEVSMQH-NDS 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH+ G K +LT+T N +K+K +K+ + SLSGE +REGLT
Sbjct: 263 YTENIYTFVNNINTPEGGTHLTGFKNALTKTFNDYARKNKLLKENEDSLSGEDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++V P+FEGQTK +LGN E R VD V E LT +LE +P + ++ KS+ A +A
Sbjct: 323 IISIKVAEPQFEGQTKQKLGNSEARTAVDNIVSEQLTYFLEQNPGIAKAMCEKSILAQRA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS L +LPGKLADCS PE EI+IVEGDSAGGSAK R R Q
Sbjct: 383 RAAARKARDLTRRKSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKTARSRATQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKIII+TDADV
Sbjct: 443 AILPLRGKILNVEKARMDRIYGNAEIKAMITAFGTGIH-EDFDISKLRYHKIIIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLTF YR+ L +G +Y+ PPLYK+E+ K+V Y Y D EL +
Sbjct: 502 DGAHISTLLLTFLYRFMPELIKQGYVYLAQPPLYKIEKNKKVWYAYSDDELNSIMMEIGR 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVDTR 537
+ IQR+KGLGEM QLWETT++PE+R+L ++ + E +E ++ F++LMG +V+ R
Sbjct: 562 DTNNKIQRYKGLGEMDAEQLWETTMDPERRILLRVTMDEETTSEIDLTFTTLMGDQVEPR 621
Query: 538 KELIQ-NAANLVNLD 551
+E I+ NA + NLD
Sbjct: 622 REFIEANAKRVQNLD 636
>gi|335433679|ref|ZP_08558497.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
gi|334898482|gb|EGM36588.1| DNA gyrase subunit B [Halorhabdus tiamatea SARL4B]
Length = 637
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/555 (48%), Positives = 369/555 (66%), Gaps = 16/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V R+G + Q + G P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSAKLEVEVRREGSVWKQTFDHGAP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT + ++ GT IRFWPD +F T F +T+ R+RELAFLN + I L
Sbjct: 152 ADDLT-EIEALEDSSETGTSIRFWPDGDIFETT-DFQFSTLENRLRELAFLNSGVEITLA 209
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
E ++Q E F + GG+ E+V++LN K PLHD V+ F + +G+ +++ALQ ++
Sbjct: 210 DE-----RDQRRETFQYDGGIREFVEYLNETKDPLHDGVIYFEDESEGVQVEVALQATTE 264
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + + D + +L GE +REG+T
Sbjct: 265 LQG-SIHAFANNINTREGGTHLTGFKTALTRVVNDYATDNDLLSDIEETLKGEDIREGMT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR VV+ ++ + L Y E HPDV +I+ K++ A K
Sbjct: 324 AVISVKHPDPQFEGQTKTKLGNSEVRGVVESAMHQNLGTYFEEHPDVAGAIVRKAVEAAK 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++A +L R+KS L S++LPGKLADC + P E+E+FI EGDSAGGSAKQ R+ F
Sbjct: 384 ARKAAQKAEELTRRKSALESTALPGKLADCQTKEPSEAELFIAEGDSAGGSAKQARNPEF 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QA+LP+RGKILNVE+ + +N++I+N+I ALG GV G++F + LRY KII TDAD
Sbjct: 444 QAVLPIRGKILNVEKHRLDRILENDQIRNIITALGTGV-GDEFDIDELRYEKIIFATDAD 502
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ + L + G IY PPLY++ + DAE ++
Sbjct: 503 VDGAHIRTLLLTFFYRHMRPLLENGHIYAARPPLYRIRYRGETYDAMTDAERDEIIEEKC 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
IQRFKGLGEM P QLW+TT+NPE R LKQ+ I+DAA A+ +FS LMG V+ RK
Sbjct: 563 DGNPTQIQRFKGLGEMNPKQLWDTTMNPENRFLKQITIDDAAAADKMFSVLMGDAVEPRK 622
Query: 539 ELIQN---AANLVNL 550
+ I+ AN V++
Sbjct: 623 QFIKENSPEANWVDI 637
>gi|317495092|ref|ZP_07953463.1| DNA gyrase, subunit B [Gemella morbillorum M424]
gi|316914799|gb|EFV36274.1| DNA gyrase, subunit B [Gemella morbillorum M424]
Length = 643
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/552 (47%), Positives = 380/552 (68%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LE V RDG + K+ RG+
Sbjct: 102 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEAYVHRDGKIHSMKFERGEV 159
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +T + D+ GT +RF D ++F ++++ + RIRELAFLN +TI L+
Sbjct: 160 VQGITV----IGETDKTGTTVRFKADPEIFQETTVYEYDILRSRIRELAFLNKGITIVLK 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E + EK + ++ + GGL EYV+ LN +K LH+ + +++G +++++Q+ + Y
Sbjct: 216 DERENQEKEE--DFCYEGGLLEYVEMLNENKDALHEAIYVHGEMEGKEVEISMQYNT-GY 272
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S +L YAN+I T +GGTH G K +LTR +N+ GKK+K +K+K+ +L+G+ VREGL I
Sbjct: 273 SSNILSYANNINTHEGGTHESGFKTALTRIINAYGKKNKLIKEKE-TLTGDDVREGLVAI 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P V I+ K L A +A
Sbjct: 332 ISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKVAKIIVEKGLQASRAR 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK GRD +FQA
Sbjct: 392 IAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLGRDSKFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPL+GKILNVE+ + ++EI++LI A+G+G+ GE + LRYHKI+I+TDADVD
Sbjct: 452 ILPLKGKILNVEKVRIDKVLSSDEIRSLITAVGMGI-GETLNMDKLRYHKIVIMTDADVD 510
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+RY + L D G +Y+ PPLY ++ GK+ YC+ + ELK+ F +
Sbjct: 511 GSHIRTLLLTFFFRYMRELIDAGYVYIARPPLYGLKVGKKEYYCHTEEELKQHIEEFAGD 570
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM +LW+TT++P+ R++ Q+ I DA A+ F +LMG +V+ R++
Sbjct: 571 KKYAVQRYKGLGEMNAEELWDTTMDPKHRLMYQVSIGDAQRADAAFDTLMGEKVEPRRKF 630
Query: 541 I-QNAANLVNLD 551
I +NA N++NLD
Sbjct: 631 IEENALNVINLD 642
>gi|164686442|ref|ZP_02210470.1| hypothetical protein CLOBAR_00007 [Clostridium bartlettii DSM
16795]
gi|164604453|gb|EDQ97918.1| DNA gyrase, B subunit [Clostridium bartlettii DSM 16795]
Length = 633
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/529 (51%), Positives = 363/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVN LSE L V+R+G Y Q Y +G + L V D GT I+F
Sbjct: 114 LHGVGISVVNGLSEWLVAEVYRNGKIYRQSYKKGITDSELEI----VGESDHTGTIIQFM 169
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD +F I FD+ T+ R+RELAFLN + I ED P + Q E+ + GG+ E+V
Sbjct: 170 PDATIFDD-IVFDYKTLETRLRELAFLNKGVRIVF--EDKRPGQEQKKEFLYDGGIREFV 226
Query: 145 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN+ K P+H+ VV K + +++A+Q+ +D YS+ +L +AN+I T +GG H+ G
Sbjct: 227 EYLNSTKTPIHENVVYIDKKIQDCMVEIAIQY-TDGYSENILSFANNIDTHEGGAHLAGF 285
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA+LT+T+N K++K +K+ D +LSGE +REGLT ++SV++P+P+FEGQTKT+LGN +
Sbjct: 286 KAALTKTVNEYAKRNKLLKENDANLSGEDIREGLTAVVSVKLPDPQFEGQTKTKLGNTRM 345
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD E L +LE +P I+ K+L A +A AAKRAR+L R+K+VL S+SLPG
Sbjct: 346 RGIVDAVTVEELGAFLEENPQTSRIIVDKALRAQRAREAAKRARELTRRKTVLESTSLPG 405
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC+ P +SEIF+VEGDSAGGSAKQGRDR QAILPLRGKILNVE+ + ++
Sbjct: 406 KLADCAEKDPAKSEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKSRLDRILSSD 465
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+N+I A G GV G DF E RYHKI+I+TDADVDGAHIRTLLLTFF+RY + L D G
Sbjct: 466 EIKNMITAYGCGV-GNDFDLEKARYHKIVIMTDADVDGAHIRTLLLTFFFRYMRPLIDNG 524
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLYKV++ K+ Y Y D +L+ + + + +QR+KGLGEM P QLWETT
Sbjct: 525 YVYIAQPPLYKVKKQKKEYYVYSDKQLEALLEEIGKSGI-ELQRYKGLGEMNPEQLWETT 583
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R L Q+ I+DA EA+ +FS LMG +V RKE I+ A V NLD
Sbjct: 584 MNPETRTLLQVTIDDATEADRIFSMLMGDKVGPRKEFIEENAEFVKNLD 632
>gi|393782285|ref|ZP_10370470.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
gi|392673556|gb|EIY67015.1| DNA gyrase, B subunit [Bacteroides salyersiae CL02T12C01]
Length = 655
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/559 (46%), Positives = 372/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 105 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMVTQVYRNGKVYQQEYEIGKPLY 162
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
V V + GTR +FWPD +FT + + + +AGR+RELA+LN + I L
Sbjct: 163 P----VKEVGVSEHTGTRQQFWPDNTIFTETV-YKYEILAGRMRELAYLNAGIKITLTDR 217
Query: 123 DSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ Q+ + F GL+E+V++L + + L +DV+ + GI I++A+ + +
Sbjct: 218 RTVNDEGQFKQEVFYSEEGLKEFVRYLESSRDHLINDVIYLNTEKQGIPIEVAIMYNT-G 276
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+++ Y N+I TI+GGTH+ G + +LTRTL + SK ++ + ++G+ REGLT
Sbjct: 277 FSESIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEIAGDDFREGLTG 336
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+ K + A A
Sbjct: 337 VISVKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKEAKQIVDKVILAATA 396
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 397 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDATKCELFLVEGDSAGGTAKQGRNRAFQ 456
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A LRYHKIII+T
Sbjct: 457 AILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMT 516
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 517 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCWTDAQRQKFID 576
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ IE+AAEA+ +FS LMG
Sbjct: 577 TYGGGSENAVHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIENAAEADYIFSMLMGE 635
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I++ A N+D
Sbjct: 636 DVGPRREFIEDNATYANID 654
>gi|168183732|ref|ZP_02618396.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|237793326|ref|YP_002860878.1| DNA gyrase subunit B [Clostridium botulinum Ba4 str. 657]
gi|182673147|gb|EDT85108.1| DNA gyrase, B subunit [Clostridium botulinum Bf]
gi|229263377|gb|ACQ54410.1| DNA gyrase, B subunit [Clostridium botulinum Ba4 str. 657]
Length = 637
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 387/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE V V RDG + QKY RG P
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEHCNVEVRRDGHIWLQKYERGIP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V ++ GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEKHGTKIYFKPDVEIFD-ELEFEYDTLAQRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A+Q+ +D
Sbjct: 209 DERYDKQEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDTDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFNLEKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 503 DGAHIRTLLLTFFYRYMKELVEEGHVYIAQPPLYRIYKAKKELYVYSDKELDEALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT+NPE R L Q+ IEDA A+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMDPEQLWETTMNPEHRTLLQVTIEDAMAADEIFTILMGTKVEPRR 622
Query: 539 ELIQNAAN-LVNLD 551
+ I+N A+ +VNLD
Sbjct: 623 DFIENNADKVVNLD 636
>gi|329954160|ref|ZP_08295255.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
gi|328528137|gb|EGF55117.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056]
Length = 653
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/562 (46%), Positives = 378/562 (67%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V V + D GTR +FWPD +FT + ++++ +A R+RELA+LN + I L
Sbjct: 158 LYS----VKEVGTTDITGTRQQFWPDDTIFTETV-YNYDILATRMRELAYLNAGIKITLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
E Y + F GL+E+V+++++ ++ L +DV+ + G +++A+ + +
Sbjct: 213 DLRVKEEDGSYKQEIFYSVEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + +SG+ REGL
Sbjct: 273 -SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEISGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKESKMIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R
Sbjct: 392 QARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRA 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+ + LRY K+I
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDSEDSKEANIDKLRYKKVI 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + +G +Y+ PPLY +GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIQQGYLYIATPPLYLCTKGKVKEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ FS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEADYTFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|298372284|ref|ZP_06982274.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
gi|298275188|gb|EFI16739.1| DNA gyrase, B subunit [Bacteroidetes oral taxon 274 str. F0058]
Length = 653
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/560 (46%), Positives = 371/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS+ L+ V R+G Y Q+YSRG P
Sbjct: 101 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSDYLKAEVCRNGKRYVQEYSRGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
+ V V + GT I F PDK +F I + ++ + R+RELAFLN +LTI
Sbjct: 159 LG----EVKEVGTSSETGTTITFHPDKDIFID-IHYKYSILVKRMRELAFLNAGIRLTIT 213
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ + + N+ E++ GL E+V+++++ ++PL +DV+ D G +++A+ + +
Sbjct: 214 DLRSEEEGGANKTEEFYSEQGLREFVKYIDSTREPLINDVIYIDTDKYGTPVEVAMMYNT 273
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL +K ++ + +S + REG+
Sbjct: 274 -SYTENLHSYVNNINTIEGGTHVTGFRTALTRTLKKYADDNKLLEKTKVEISSDDFREGI 332
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV+ +VD++V E L +LE HP +I+ K + A
Sbjct: 333 TAVISVKVAEPQFEGQTKTKLGNDEVKGMVDRAVGEALNVFLEEHPKEAKTIVEKIILAA 392
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR+LV++KS L LPGKLADCSS EIF+VEGDSAGGSAKQGRDR
Sbjct: 393 TARNAARKARELVQRKSPLSGGGLPGKLADCSSRDASLCEIFLVEGDSAGGSAKQGRDRN 452
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKEALRYHKIII 413
FQAILPLRGKILNVE+ +++EE++N+ ALG+ + E+ E LRYHK++I
Sbjct: 453 FQAILPLRGKILNVEKAMRHKAFESEEVRNIYTALGVTIGTEEDSQALNIEKLRYHKVVI 512
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY ++GK +YC+ + + +
Sbjct: 513 MTDADVDGSHIATLILTFFFRYMKELIEQGHVYIATPPLYLCKKGKVQEYCWTEEQRLRF 572
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ I QR+KGLGEM P QLWETT+NPE R L+Q+ IE+AAEA+ VFS LMG
Sbjct: 573 IQQYGDGKESGITQQRYKGLGEMNPEQLWETTMNPENRTLRQITIENAAEADYVFSMLMG 632
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R++ I+ A N+D
Sbjct: 633 DDVAPRRQFIEENATYANID 652
>gi|357060838|ref|ZP_09121602.1| B subunit [Alloprevotella rava F0323]
gi|355375671|gb|EHG22954.1| B subunit [Alloprevotella rava F0323]
Length = 653
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/563 (47%), Positives = 374/563 (66%), Gaps = 20/563 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ V + +GTR +FWPD VF+T +++ T++ R+RELA+LN L I L
Sbjct: 156 LYSVKV----VGETELRGTRQQFWPDDTVFSTTT-YNYETLSNRMRELAYLNAGLKITLT 210
Query: 121 KEDSDPEKN-QYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
D E N + E+F GL ++V++L++ + L D V+ + +G+ ID+A+ + +
Sbjct: 211 DLRQDDEGNIRQQEFFSEQGLPQFVRYLDSSRSHLFDDVIHISTNKNGLPIDVAVMYNT- 269
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTVKDKDISLSGEHVREG 236
Y++ + Y N+I TI+GGTH+ G + +LTR L + +++ K ++ I +SGE REG
Sbjct: 270 GYAENIHSYVNNINTIEGGTHLTGFRQALTRVLKNYAEQTAAKQIEKAKIEISGEDFREG 329
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+V P+FEGQTKTRLGN EV V+Q+V E T YLE HP I+ K + A
Sbjct: 330 LTAVISVKVAEPQFEGQTKTRLGNSEVTGAVNQAVGEAFTNYLEEHPKEAKLIVDKVILA 389
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
A +AA++AR+ V++KS L LPGKLADCSS E E+F+VEGDSAGGSAKQGR R
Sbjct: 390 ATARIAARKARESVQRKSPLTGGGLPGKLADCSSKDAAECELFLVEGDSAGGSAKQGRSR 449
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE--DFKKEALRYHKII 412
R QAILPLRGKILNVE+ ++++E+ N+I+A+G+ G+ GE + E LRYHKII
Sbjct: 450 RTQAILPLRGKILNVEKAMWHKAFESDEVNNIIQAMGVRFGLDGESKEANIEKLRYHKII 509
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLY--KVERGKQVQYCYDD-AE 469
I+ DADVDG HI TL++T FYRY L ++G +Y+ +PPLY K ++G YCY++ A
Sbjct: 510 IMADADVDGQHIATLIMTLFYRYMPQLIEDGYLYIAMPPLYRCKSKKGNHEDYCYNEQAR 569
Query: 470 LKKVKS-SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 528
L+ +K S QR+KGLGEM P QLWETT+NPE R+LKQ+ +E+A+ A+ FS
Sbjct: 570 LQFIKDYGDGSEENIVTQRYKGLGEMNPSQLWETTMNPETRLLKQVTLENASNADFTFSM 629
Query: 529 LMGARVDTRKELIQNAANLVNLD 551
LMG V R+E I+ A N+D
Sbjct: 630 LMGEDVGPRREFIERNATYANID 652
>gi|358051218|ref|ZP_09145436.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
gi|357259294|gb|EHJ09133.1| DNA gyrase subunit B [Staphylococcus simiae CCM 7213]
Length = 644
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/552 (50%), Positives = 372/552 (67%), Gaps = 10/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV V+R+ YHQ Y +G P
Sbjct: 101 VILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSEDLEVYVYRNDTIYHQAYKKGVP 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D GT IRF D +FT +++ T+ RIRELAFLN + I L
Sbjct: 159 QFDLK----EVGTTDVTGTTIRFKADGSIFTETQVYNYETLQQRIRELAFLNKGIEITL- 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
K++ D E + + Y + GG++ YV+ LN +K+PL+D + + D + +++A+Q+ S
Sbjct: 214 KDERDKENIREDSYHYEGGIKSYVELLNENKEPLYDEPIYIHQSKDDVEVEIAIQYNS-G 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LN+ G SK +K+ L+GE REG+T
Sbjct: 273 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNNYGLNSKIMKEDKERLTGEDTREGMTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ +P+FEGQTKT+LGN EVR++VD+ E+ +L +P V I+ K + A A
Sbjct: 333 IVSIKHSDPQFEGQTKTKLGNSEVRQIVDKLFSEHFERFLYENPQVARVIVDKGIMASHA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 393 RVAAKKAREVTRRKSALDVASLPGKLADCSSKVPEECEIFLVEGDSAGGSTKSGRDSRTQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLSKARYHKIVIMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GKQ Y ++D EL K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVFNDRELDKLKAELNP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLW+TT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 572 TPKWSIARYKGLGEMNADQLWDTTMNPEHRSLLQVKLEDAIEADQTFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|73661314|ref|YP_300095.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72493829|dbj|BAE17150.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 641
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/552 (49%), Positives = 367/552 (66%), Gaps = 9/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V++D YHQ Y +G P
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYKDRKVYHQGYKKGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ D GT IRF D ++FT + + T+ R RELAFLN ++I LR
Sbjct: 155 --QFDLKVIEETDDDNTGTVIRFKADSEIFTETTTYHYETLQQRTRELAFLNKGISITLR 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + Y + GG++ YV+ LN +K+PLH+ + + D I +++ALQ+ +
Sbjct: 213 --DERGEEVREDTYHYEGGIKSYVEMLNENKQPLHEEPIYVHQTKDDIEVEIALQY-NKG 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE REGLT
Sbjct: 270 FATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGEDTREGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V ++ K + A A
Sbjct: 330 IVSIKHGDPQFEGQTKTKLGNSEVRQIVDKLFSELFERFLYEHPQVGRIVVEKGIMASHA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K GRD Q
Sbjct: 390 RLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTKSGRDSETQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+++TDADV
Sbjct: 450 AILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKIVLMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K+K+
Sbjct: 509 DGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELEKLKAELEP 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ VF LMG V+ R++
Sbjct: 569 TPKWSISRYKGLGEMNADQLWETTMNPENRAMLQVSLDDAIEADQVFEMLMGDVVENRRQ 628
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 629 FIEDNAVYANLD 640
>gi|332685539|ref|YP_004455313.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|379726623|ref|YP_005318808.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
gi|332369548|dbj|BAK20504.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]
gi|376317526|dbj|BAL61313.1| DNA gyrase subunit B [Melissococcus plutonius DAT561]
Length = 650
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/536 (48%), Positives = 358/536 (66%), Gaps = 20/536 (3%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS LE V+R+G Y+Q+Y RG V L + DR GT I F
Sbjct: 125 LHGVGSSVVNALSTKLEARVYRNGKIYYQEYHRGNVVADLKV----IGDTDRHGTAIHFI 180
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F I+F+ +A R+RELAFLN L I++ ED + +Y++ GG++ YV
Sbjct: 181 PDPEIFKETIEFNFEKLATRVRELAFLNRGLKISI--EDLRGPETVLRDYYYEGGIKSYV 238
Query: 145 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 200
LN +K L D V G +++ IT+++++Q+ +D Y +L +AN+I T +GGTH
Sbjct: 239 GHLNANKDVLFDEPIYVEGEQQE---ITVEVSMQY-TDGYHSNLLSFANNIHTYEGGTHE 294
Query: 201 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 260
G K +LTR +N KK K +K+ D +L+GE VREGLTC+IS++ P P+FEGQTKT+LGN
Sbjct: 295 AGFKTALTRVINDYAKKQKLMKENDENLTGEDVREGLTCVISIKHPEPQFEGQTKTKLGN 354
Query: 261 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 320
EVR V D+ E+ ++L +P + I+ K L A KA LAAKRAR++ R+K L S+
Sbjct: 355 SEVRTVTDRLFSEHFGKFLMENPTIGKKIVDKGLLASKARLAAKRAREVTRRKGNLEISN 414
Query: 321 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 380
LPGKLADCSS E+ E+FIVEGDSAGGSAKQGRDR FQAILP+RGKILNVE+ +
Sbjct: 415 LPGKLADCSSREAEKCELFIVEGDSAGGSAKQGRDRMFQAILPIRGKILNVEKASMDKIL 474
Query: 381 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 440
NEEI++L A+G G GEDF RYHK+II+TDADVDGAHIRTLLLT FYR+ + +
Sbjct: 475 ANEEIRSLFTAMGTGF-GEDFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRFMRPIV 533
Query: 441 DEGCIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMP 496
+ G +Y+ PPLY V++GK + Y + EL + + P + S+QR+KGLGEM
Sbjct: 534 EAGYVYIAQPPLYGVKQGKNITYVQPGKQAEEELSHLMETLPKSPKASVQRYKGLGEMDD 593
Query: 497 VQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
QLWETT++PE+R++ ++ ++DA A+ +F LMG +V+ R+ I+ A+ V NLD
Sbjct: 594 HQLWETTMDPERRLMSRVSVDDAVAADQIFEMLMGDKVEPRRAFIEENAHYVKNLD 649
>gi|325269651|ref|ZP_08136264.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
gi|324988019|gb|EGC19989.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
multiformis DSM 16608]
Length = 657
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/567 (46%), Positives = 377/567 (66%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD +FTT + F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETDKTGTRQQFWPDAGIFTTTV-FQWDIVARRMRELAYLNAGIKITLS 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + I I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G + +LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRTALTRTLKAYADNDPQISKQIEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPNEAKLICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEDEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY D
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVSEYCYTDQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEKNATYANID 656
>gi|383752835|ref|YP_005431738.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381364887|dbj|BAL81715.1| putative DNA gyrase subunit B [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 672
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/553 (48%), Positives = 376/553 (67%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG + + RG+
Sbjct: 131 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTSMEVQVKRDGKIHEISFKRGET 188
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L HV + GTR+ F PD ++F+ + ++T+ R+RELAFLN +TI L
Sbjct: 189 VEKL--HV--TGETEITGTRVHFVPDPEIFSVTT-YSYDTLKHRLRELAFLNHGITIVLN 243
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E + +++ ++ F GG+ +V+ LN K+ ++ + + F D +++ALQ+ +D+
Sbjct: 244 DERGEELRSE--QFHFEGGISSFVEHLNRKKEKINPEPIYFNGTKDDTVVEIALQY-NDS 300
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSG+ VREGLT
Sbjct: 301 YQENIYSFVNNINTEEGGTHLAGFKLALTRAANDFARKQNILKDKDGNLSGDDVREGLTA 360
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++V +P+FEGQTKT+LGN EVR +VD V E L+EY E +P + + K++ A +A
Sbjct: 361 VISLKVRDPQFEGQTKTKLGNSEVRGIVDSIVTEGLSEYFEENPTITKKFIEKAIMAARA 420
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS PE +EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 421 REAARKARELTRRKNALEVSSLPGKLADCSVKDPEMAEIYLVEGDSAGGSAKQGRDRRFQ 480
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ +DF RY KIII+TDADV
Sbjct: 481 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-DDFDLSKRRYGKIIIMTDADV 539
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YRY K L + G +++ PPLY++ +GK+ Y Y D EL K
Sbjct: 540 DGAHIRTLLLTFLYRYMKPLIEHGHVFIAQPPLYQIRKGKKHWYTYSDEELAKKLDEVGR 599
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ ++QR+KGLGEM P QLWETT++P R + ++ + DA A+ +F+ LMG +V+ R++
Sbjct: 600 DG-STVQRYKGLGEMNPEQLWETTMDPAGRTMLRVEMADAEAADELFTILMGDKVEPRRQ 658
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 659 FIEENAKLVRNLD 671
>gi|167764147|ref|ZP_02436274.1| hypothetical protein BACSTE_02530 [Bacteroides stercoris ATCC
43183]
gi|167698263|gb|EDS14842.1| DNA gyrase, B subunit [Bacteroides stercoris ATCC 43183]
Length = 653
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/562 (45%), Positives = 378/562 (67%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRNGKIYQQEYECGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V V + GTR +FWPD +FT + + ++ +A R+RELA+LN + I L
Sbjct: 158 LYS----VKEVGTTAITGTRQQFWPDATIFTETV-YSYDILATRMRELAYLNAGIKITLT 212
Query: 121 KEDSDPEKNQYNE--YFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
E Y + ++ GL+E+V+++++ ++ L +DV+ + G +++A+ + +
Sbjct: 213 DLRVKEEDGSYKQEVFYSVEGLKEFVRYIDSSREHLVNDVIYINTEKQGTPVEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ + +SG+ REGL
Sbjct: 273 -SYNENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKMLEKAKVEISGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L+ YLE HP I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDQAVGEALSYYLEEHPKEAKMIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+R
Sbjct: 392 QARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRNRT 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHKII 412
FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV GED K+ + LRY K+I
Sbjct: 452 FQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDGEDSKEANIDKLRYKKVI 511
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL++T F+RY + +G +Y+ PPLY +GK +YC+ D + +K
Sbjct: 512 IMTDADVDGSHIDTLIMTLFFRYFPQVIQQGYLYIATPPLYLCTKGKVKEYCWTDQQRQK 571
Query: 473 VKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ FS L
Sbjct: 572 FIDTYGGGSENAVHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLENAAEADYTFSML 630
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A N+D
Sbjct: 631 MGEDVGPRRDFIEKNATYANID 652
>gi|145577995|gb|ABP82716.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus
thuringiensis serovar oswaldocruzi]
Length = 631
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 378/555 (68%), Gaps = 18/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F ++ +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVE DSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVE-DSAGGSAKQGRDRH 437
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 438 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 496
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+KV++GK++QY Y++ EL+K+ +
Sbjct: 497 DVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAEL 556
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 557 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 616
Query: 538 KELIQ-NAANLVNLD 551
+ IQ NA + NLD
Sbjct: 617 RNFIQENAKYVKNLD 631
>gi|297588052|ref|ZP_06946696.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
gi|297574741|gb|EFH93461.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
ATCC 53516]
Length = 638
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/556 (48%), Positives = 380/556 (68%), Gaps = 19/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S+ Y SGGLHGVG+S VNALS L V RDG Y Q++ +GK V
Sbjct: 95 VLTVLHAGGKF--SNDAYQYSGGLHGVGVSCVNALSTYLIARVKRDGKMYEQRFEKGKTV 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T LT V GT I F PD +F T + FD N +A R RE+AFLN + I
Sbjct: 153 TELTVIKENVRG---TGTTIEFMPDNTIFET-LNFDKNVLAKRFREMAFLNKGVKIEFA- 207
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
E+ Y E F + GG++ +V+++N KKPL H+V+ + D +++A+Q+ +++
Sbjct: 208 ----DEREGYKELFHYEGGIKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQY-TES 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++T++ + N+I+T+DGGTH+ G K++LTR LN + +K+KD +LSG+ VREG+T
Sbjct: 263 YNETIVSFTNNIKTVDGGTHVVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGITA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++ NP+FEGQTK +LGN E R VVD V E+L+ Y E +P ++ +I+ K+L++ KA
Sbjct: 323 VVSVKLNNPQFEGQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVKTIIQKALASQKA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAA+RARDLVR+KSVL +++LPGKLADC S+ E +EIF+VEGDSAGGSAK GRD +FQ
Sbjct: 383 RLAARRARDLVRKKSVLDNTTLPGKLADCQSSDIEHNEIFLVEGDSAGGSAKGGRDNKFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + + EI+ +I A G G+ G++F LRY KI+I+TDADV
Sbjct: 443 AILPLRGKILNVEKAHLERVLNSNEIKAMITAFGTGI-GKNFDISKLRYGKIVIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFP 478
DGAHIRTLLLTF YR+ K L ++G +Y+ PPLY + +G K ++YCY + EL++ +
Sbjct: 502 DGAHIRTLLLTFLYRFMKPLVEKGHVYIAQPPLYGIIKGVKVMEYCYTEKELEEALEKYG 561
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVDT 536
+ +QR+KGLGEM QLW+TT+NPE R+L ++ I ED E + F LMG V+
Sbjct: 562 ERSNIKVQRYKGLGEMNAEQLWDTTMNPEHRILIKVEIDGEDENELDNTFDVLMGDNVEP 621
Query: 537 RKELI-QNAANLVNLD 551
R+E I QNA N+D
Sbjct: 622 RREFIEQNAVYAQNID 637
>gi|56961788|ref|YP_173510.1| DNA gyrase subunit B [Bacillus clausii KSM-K16]
gi|56908022|dbj|BAD62549.1| DNA gyrase subunit B [Bacillus clausii KSM-K16]
Length = 641
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/530 (49%), Positives = 349/530 (65%), Gaps = 11/530 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L V V DG + Q YSRG P LT + D+ GT I F
Sbjct: 119 LHGVGASVVNALSTHLTVNVHLDGKIHSQSYSRGVPDADLTV----IGETDKTGTTITFQ 174
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F ++FD+ T+A RIRELAFLN LTI + ED E + Y + GG+ +V
Sbjct: 175 PDPEIFRETVEFDYETLAARIRELAFLNKGLTIKI--EDKRTEDGKKATYHYEGGISSFV 232
Query: 145 QWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K+ LH+ + + DGI++++A+Q+ +D ++ ++ +AN+I T +GGTH G
Sbjct: 233 KHLNRSKETLHEEPIYVESEKDGISVEVAVQY-NDGFTSSIYSFANNINTHEGGTHESGF 291
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K LTR +N +K+ K+ D +LSGE VREGLT IISV++P P+FEGQTKT+LGN E
Sbjct: 292 KTGLTRVINDYARKNGLFKENDPNLSGEDVREGLTAIISVKIPEPQFEGQTKTKLGNSEA 351
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R + D E +L +P V I+ K L A +A AAK+AR+L R+KS L SSLPG
Sbjct: 352 RTITDSLFSESFARFLSENPGVARKIVDKGLMASRAREAAKKARELTRRKSALEVSSLPG 411
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KL DC+S SE+FIVEGDSAGGSAK GRD FQAILPLRGKILNVE+ + N
Sbjct: 412 KLTDCTSKDASISELFIVEGDSAGGSAKGGRDPHFQAILPLRGKILNVEKARLDKILANN 471
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I A+G G+ G++F RYHKI+I+TDADVDGAHIRTL+LTFFYRY + L + G
Sbjct: 472 EIRMIITAIGTGI-GDEFDISKARYHKIVIMTDADVDGAHIRTLILTFFYRYMRELLENG 530
Query: 444 CIYVGVPPLYKVERGK-QVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWET 502
+Y+ PPLYK+E+GK V Y Y D EL ++ + S+QR+KGLGEM QLWET
Sbjct: 531 YVYIAQPPLYKIEQGKNNVTYVYSDRELDAHLATVADRSKVSVQRYKGLGEMNAGQLWET 590
Query: 503 TLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
T++P+ R + Q+ + DA +A+ +F LMG RV+ R++ IQ A+ V NLD
Sbjct: 591 TMDPQVRNMLQVTLADAIKADEIFEILMGDRVEPRRDFIQENAHYVKNLD 640
>gi|357043575|ref|ZP_09105266.1| DNA gyrase, B subunit [Prevotella histicola F0411]
gi|355368239|gb|EHG15660.1| DNA gyrase, B subunit [Prevotella histicola F0411]
Length = 658
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/568 (46%), Positives = 379/568 (66%), Gaps = 25/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 IVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D+ GTR +FWPD +FTT + F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----IGETDKTGTRQQFWPDGDIFTTTV-FQWDIVARRMRELAYLNAGIKITLT 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + GI I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQGIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKAYADNDPQISKQIEKAKIEITGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKEA----LR 407
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ + + EA LR
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEESEGEFEANIDKLR 509
Query: 408 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 467
Y KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY +
Sbjct: 510 YDKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTFKKVSEYCYTE 569
Query: 468 ----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
A L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QQRQAFLDKYGNGTEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADAD 629
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R++ I+ A N+D
Sbjct: 630 EIFSMLMGDDVEPRRDFIEKNATYANID 657
>gi|373460688|ref|ZP_09552439.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
gi|371955306|gb|EHO73110.1| DNA gyrase, B subunit [Prevotella maculosa OT 289]
Length = 656
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/567 (46%), Positives = 376/567 (66%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D++GTR +FWPD +FTT F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----IGETDKRGTRQQFWPDPAIFTTTT-FKWDIVASRMRELAYLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADAEPTIAKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAKKICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++KSV+ LPGKLADCS+ P+E EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKSVMSGGGLPGKLADCSNKDPKECEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCSYKKVSEYCYTEQQ 569
Query: 470 L-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
K V+ AL++ QR+KGLGEM P QLWETT++P R+LKQ+ I++AAEA+
Sbjct: 570 RQAFIDKYVEGKEDDKALHT-QRYKGLGEMNPEQLWETTMDPSSRLLKQVTIQNAAEADE 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVEPRREFIEQNATYANID 655
>gi|421186532|ref|ZP_15643923.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
gi|399966874|gb|EJO01375.1| DNA gyrase subunit B [Oenococcus oeni AWRIB418]
Length = 652
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/550 (48%), Positives = 363/550 (66%), Gaps = 11/550 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ T+LHAGGKF S Y VSGGLHGVG SVVNALS+ ++V V+RD Y+ + RG
Sbjct: 106 VFTILHAGGKF--DSKSYKVSGGLHGVGASVVNALSKEMDVRVYRDNKIYYMDFERGHIK 163
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T + P+ + ++GT + F PD +F I FD+ T+A RIRELAFLN L +++
Sbjct: 164 TEMKLLDEPM--RLKRGTIVHFAPDPDIFRETIVFDYRTLASRIRELAFLNKGLRLSITD 221
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
+ DP KN+ + + GG+ EYV++LN +K+PL + V + +GI +++ALQ+ +DA
Sbjct: 222 KRVDPVKNE--SFMYEGGIAEYVKFLNKNKQPLFPEPVYVEGEENGIQVEVALQY-TDAV 278
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++T++ + N+I T +GGTH G K +LTR +N KK +KD D LSGE VREG+T I
Sbjct: 279 AETLMSFTNNIHTHEGGTHETGFKMALTRIINDYAKKKGILKDSDDPLSGEDVREGITAI 338
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN + ++ V+ ++ +P+ +I +K L A KA
Sbjct: 339 VSIKHPDPQFEGQTKTKLGNTDAQQAVNHQFSTIFNRFMMENPETARAIANKGLIASKAR 398
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+ARDL R+KS L S+L GKLAD +S PE SE+FIVEGDSAGGSAKQGR R QA
Sbjct: 399 VAAKKARDLTRKKSGLEISALAGKLADNTSRDPEISELFIVEGDSAGGSAKQGRSRLTQA 458
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G GE+F YHK+II+TDADVD
Sbjct: 459 ILPIRGKILNVEKATLDKVLANEEIRSLFTAMGTGF-GEEFDISKAHYHKVIIMTDADVD 517
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY--DDAELKKVKSSFP 478
GAHIRTLLLT F+RY + L D G IY+ PPLY V G Q Y D EL + ++ P
Sbjct: 518 GAHIRTLLLTLFFRYMRPLIDAGYIYIAQPPLYGVAIGNSDQRVYLDSDEELDQYTATLP 577
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
++ IQR+KGLGEM VQLW+TT++P+ R L ++ E E + F LMG RV+ R+
Sbjct: 578 ASPKPRIQRYKGLGEMDAVQLWDTTMDPKHRRLLRVDPEYQPEVDTTFDMLMGDRVEPRR 637
Query: 539 ELIQNAANLV 548
E I++ A V
Sbjct: 638 EFIEDNAQFV 647
>gi|299147112|ref|ZP_07040179.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
gi|298514997|gb|EFI38879.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23]
Length = 652
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/559 (46%), Positives = 372/559 (66%), Gaps = 19/559 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
+ V V + D GTR +FWPD +FT + +D+ +A R+RELA+LN L I+L
Sbjct: 160 S----VKEVGTADITGTRQQFWPDNTIFTETV-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 123 DSDPEKNQYN--EYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
E + +++ GL E+V+++ + ++ L +DV+ + GI I++A+ + +
Sbjct: 215 RVVNEDGSFKGEQFYSEEGLREFVRFIESSREHLINDVIYLNSEKQGIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENVHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A A
Sbjct: 334 VISVKVQEPQFEGQTKTKLGNNEVMGAVDQAVGEVLAYYLEEHPKEAKTIVDKVILAATA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR++V++KS + LPGKLADCS + E+F+VEGDSAGG+AKQGR+R FQ
Sbjct: 394 RHAARKAREMVQRKSPMSGGGLPGKLADCSDKDATKCELFLVEGDSAGGTAKQGRNRMFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIILT 415
AILPLRGKILNVE+ +++EI+N+ ALG+ + ++ KEA LRYHKIII+T
Sbjct: 454 AILPLRGKILNVEKAMYHKALESDEIRNIYTALGVTIGTDEDSKEANIQKLRYHKIIIMT 513
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 DADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKVEEYCWTDAQRQKFID 573
Query: 476 SF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 TYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGE 632
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DVGPRREFIEENATYANID 651
>gi|424835717|ref|ZP_18260376.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
gi|365977587|gb|EHN13685.1| DNA gyrase subunit B [Clostridium sporogenes PA 3679]
Length = 637
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 387/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE V V RDG + QKY RG P
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEHCNVEVRRDGHIWLQKYERGIP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V ++ GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEKHGTKIYFKPDVEIFD-ELEFEYDTLAQRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A+Q+ +D
Sbjct: 209 DERYDKQEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDIDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFNLEKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 503 DGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIYKAKKELYVYSDKELDEALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT+NPE R L Q+ IEDA A+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMDPEQLWETTMNPEHRTLLQVTIEDAMAADEIFTILMGTKVEPRR 622
Query: 539 ELIQNAAN-LVNLD 551
+ I+N A+ +VNLD
Sbjct: 623 DFIENNADKVVNLD 636
>gi|403743995|ref|ZP_10953474.1| DNA gyrase, B subunit [Alicyclobacillus hesperidum URH17-3-68]
gi|403122585|gb|EJY56799.1| DNA gyrase, B subunit [Alicyclobacillus hesperidum URH17-3-68]
Length = 651
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/551 (50%), Positives = 371/551 (67%), Gaps = 15/551 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKFGG+ GY VSGGLHGVG SVVNALSE L+V V RDG + Q+Y RG P+
Sbjct: 113 LTVLHAGGKFGGA--GYKVSGGLHGVGASVVNALSEWLKVEVHRDGKIHVQEYERGTPLY 170
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L V DR GT + F PD ++FT +F T+ R+RELAFLN L I L E
Sbjct: 171 DLKV----VGETDRTGTTVTFRPDPEIFTETTEFSAETLQNRLRELAFLNAGLEIVLEDE 226
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDAYS 181
E + EY + GG++E+V +LN K L + + V D +T+++ALQ+ +D YS
Sbjct: 227 R---EGGKRFEYHYEGGVKEFVLYLNHSKDVLFAEPIYVQGVKDEVTVEIALQY-NDGYS 282
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
T+ +AN+I T +GGTH G K++LTR +N G+++ +K D SL+G+ VREGLT ++
Sbjct: 283 STLYSFANNINTGEGGTHEAGFKSALTRIINDYGRRNNLIKGSDGSLTGDDVREGLTAVV 342
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
SV+VP P+FEGQTKT+LGN EVR +V+ E L +LE +P V IL K + A +A
Sbjct: 343 SVKVPEPQFEGQTKTKLGNSEVRGIVESLFGERLQIFLEENPAVARRILEKCVLAARARE 402
Query: 302 AAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAI 361
AAKRAR+L R K + +SLPGKL DC S PE SE+++VEGDSAGGSAK GRD + QAI
Sbjct: 403 AAKRARELTRNKK-MEVTSLPGKLTDCVSKDPEVSELYLVEGDSAGGSAKGGRDPQTQAI 461
Query: 362 LPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDG 421
LPLRGKI+NVE+ + NEEI+ +I A G G+ G++F RYHKI+I+TDAD DG
Sbjct: 462 LPLRGKIINVEKARLDKVLSNEEIRAIITACGTGI-GDEFDLSKARYHKIVIMTDADHDG 520
Query: 422 AHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNA 481
+HIR LLLT FYR+ + L D G IY+ PPLYK+E+GK ++Y Y D +L++
Sbjct: 521 SHIRILLLTLFYRFMRPLIDAGYIYIAQPPLYKIEKGKVIRYAYSDTQLEQALQEMGRQG 580
Query: 482 LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI 541
+ +QR+KGLGEM QLWETT++PE R L Q+ +EDA +A+++FS+LMG +V+ R++ I
Sbjct: 581 V-KLQRYKGLGEMNADQLWETTMDPESRTLLQVTMEDAMDADMIFSTLMGDKVEPRRDFI 639
Query: 542 QNAANLV-NLD 551
A V NLD
Sbjct: 640 AEHARYVRNLD 650
>gi|389844097|ref|YP_006346177.1| DNA gyrase subunit B [Mesotoga prima MesG1.Ag.4.2]
gi|387858843|gb|AFK06934.1| DNA gyrase, B subunit [Mesotoga prima MesG1.Ag.4.2]
Length = 631
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 358/553 (64%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y +SGGLHGVG SVVNALSE + V V DG Y QKY RGK
Sbjct: 92 VVMTTLHAGGKF--SKDSYKISGGLHGVGASVVNALSEWMIVEVMVDGKIYRQKYERGKA 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + GT F PD VFT FD + + R +ELA+LN + I
Sbjct: 150 LAPVEV----VGETNETGTVTSFKPDPLVFTVT-DFDFDILEARFKELAYLNGGIKITFE 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D + Y F GG+ E+V+ L +KK +H D + + + I LA+Q+ S +
Sbjct: 205 ----DRRIGEKRSYHFEGGIVEFVKALTKNKKSIHKDPIYLEGTYNDVKIQLAMQYTS-S 259
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + +L + N+I+TI+GGTH+ G K LT+T+N +G+K +KDKD +L GE +REGL+
Sbjct: 260 YDEDILTFVNNIKTIEGGTHLTGFKTVLTKTMNDVGRKHNVLKDKDPNLQGEDLREGLSA 319
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV V P+FEGQTK +LGN E + V + V+E L EY + + L +ILSK+L A +A
Sbjct: 320 ILSVFVKEPQFEGQTKAKLGNDEAFEAVMKVVKEKLEEYFDYNQKDLKAILSKALEASRA 379
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR++VR+K+ L +++LPGKLADC S +E+EIFIVEGDSAGGSAK R R Q
Sbjct: 380 RLAAKKAREMVRRKNALENTTLPGKLADCISENLDETEIFIVEGDSAGGSAKMARSRETQ 439
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ M K+E I N+I ALG G+ GEDF+ + LRY KIII+TDADV
Sbjct: 440 AILPLRGKILNVEKAGLDRMLKSETISNIIVALGTGM-GEDFEIKNLRYGKIIIMTDADV 498
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHI TLLLT FYRY L G +YV PLYK+E +Q Y Y D EL
Sbjct: 499 DGAHITTLLLTLFYRYMTPLITNGKVYVAQAPLYKIELNRQKHYFYSDEELTTFLKEHSD 558
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
L + RFKGLGEM P QLWETT+NP R L ++ IEDA EA+ VF+ LMG+ V+ R+
Sbjct: 559 RKL-NYSRFKGLGEMNPEQLWETTMNPNDRKLVKITIEDAEEADRVFTILMGSEVEERRS 617
Query: 540 LIQ-NAANLVNLD 551
IQ +A ++ NLD
Sbjct: 618 FIQRHALSISNLD 630
>gi|260891935|ref|YP_003238032.1| DNA gyrase subunit B [Ammonifex degensii KC4]
gi|260864076|gb|ACX51182.1| DNA gyrase, B subunit [Ammonifex degensii KC4]
Length = 636
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/531 (50%), Positives = 376/531 (70%), Gaps = 19/531 (3%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE LEV V R+G + Q++ RG+PVT L + DR GT + F
Sbjct: 120 LHGVGVSVVNALSEWLEVEVHREGRIWRQRFERGRPVTDLEA----IGETDRTGTTVHFK 175
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFF--AGGLEE 142
PD Q+F + F + + R+REL+FL P++ I LR E + E+ F GGL +
Sbjct: 176 PDHQIFEEVV-FSQDYLTQRLRELSFLVPEVRIVLRDERTG------EEFVFHHKGGLRD 228
Query: 143 YVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIE 201
+V+ LN ++ LH D + + +G+ ++ ALQ+ D Y++++ YAN+IRT+DGGTH
Sbjct: 229 FVRHLNRAREVLHPDPIYLAGEREGMVVEAALQY-HDGYAESIFSYANTIRTVDGGTHEA 287
Query: 202 GVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNP 261
G KA+LTR +N G++ + + + L+GE VREGLT +++V+VP+P+FEGQTKT+LGN
Sbjct: 288 GFKAALTRVVNDYGRRHGIIPE-NFQLAGEDVREGLTAVVAVKVPDPQFEGQTKTKLGNT 346
Query: 262 EVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSL 321
+VR+VV+ V E L + E +P + I+ K+L+A +A AA+RAR+L R+K +L S+SL
Sbjct: 347 QVRRVVESIVGEGLASFFEENPSIARLIVEKALAAARAREAARRARELARRKGLLESTSL 406
Query: 322 PGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYK 381
PGKLADCS P ++E++IVEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +
Sbjct: 407 PGKLADCSERDPAKTELYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARLDKILA 466
Query: 382 NEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFD 441
NEEI+ LI A+G G+ GED + +RYHK+II+TDADVDGAHIRTLLLTFF+RY + L +
Sbjct: 467 NEEIKALITAIGAGI-GEDLDLKKVRYHKLIIMTDADVDGAHIRTLLLTFFFRYMRPLIE 525
Query: 442 EGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWE 501
G +Y+ PPLY+V +GK+ Y Y+DAEL+K+ S+ N + +IQR+KGLGEM QLWE
Sbjct: 526 AGYVYIAQPPLYRVRKGKESFYAYNDAELEKLLSTLGRNGV-TIQRYKGLGEMNAEQLWE 584
Query: 502 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
TT+NPE+R++ Q+ +EDA A+ +FS+LMG +V+ R+E I A V NLD
Sbjct: 585 TTMNPEKRVILQVTLEDAVAADELFSTLMGDKVEPRREFISRYARYVRNLD 635
>gi|325102923|ref|YP_004272577.1| DNA gyrase subunit B [Pedobacter saltans DSM 12145]
gi|324971771|gb|ADY50755.1| DNA gyrase subunit B [Pedobacter saltans DSM 12145]
Length = 652
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/562 (47%), Positives = 381/562 (67%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS + V R+G + Q+Y RGKP
Sbjct: 98 IVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHVITVVHREGKIFTQEYERGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + DR GT F PD ++FT ++ +T+AGR+RELAFLN + + L
Sbjct: 156 L----FDVKVIGESDRTGTIQTFQPDPEIFTQTTEYRFDTLAGRLRELAFLNKGIRLVLT 211
Query: 121 KEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
E E + E++ GGL E+V +L++ + PL D + + +GI ++LA + +
Sbjct: 212 DEREVKEDGSFLSEEFYSEGGLREFVTFLDSTRTPLIPDAIYIEGEKNGIPVELAFTY-N 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++Y++ + Y N+I TI+GG+H+ G + LTRTL S +KS +K+ + ++G+ REGL
Sbjct: 271 NSYNENIHSYVNNINTIEGGSHVAGFRRGLTRTLKSYAEKSGLLKNLKVEITGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VD +V E L +LE +P I++K + A
Sbjct: 331 TAVISVKVQEPQFEGQTKTKLGNTEVTGAVDIAVGEALGNFLEENPKEAKLIVNKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++K+V+ S LPGKLADC++ P E+F+VEGDSAGG+AKQGR+R
Sbjct: 391 TARAAARKAREMVQRKNVMGGSGLPGKLADCANKDPHVCELFLVEGDSAGGTAKQGRNRD 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EALRYHKIII 413
FQAILPL+GKILNVE+ E +Y+N+EI+N+ ALG+ + ED K+ E LRYHK+II
Sbjct: 451 FQAILPLKGKILNVEKAMEHKIYENDEIKNIFTALGVSIGTAEDEKELNLEKLRYHKVII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD----DAE 469
+TDADVDG+HI TL+LTFF+RY K L + G IY+ PPLY+V++GK+ +YC++ DA
Sbjct: 511 MTDADVDGSHITTLILTFFFRYMKQLIEAGNIYIAAPPLYQVKKGKEFEYCWNDVQRDAA 570
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++++K ++++ IQR+KGLGEM QLWETTLNPE R LK+ IE AAEA+ +FS L
Sbjct: 571 VQRLKGGGKEDSVH-IQRYKGLGEMNAEQLWETTLNPETRTLKRATIESAAEADRIFSML 629
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A +D
Sbjct: 630 MGDEVAPRREFIEKNARYAKID 651
>gi|418574795|ref|ZP_13138957.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379326701|gb|EHY93817.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 644
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/552 (49%), Positives = 367/552 (66%), Gaps = 9/552 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE LEV V++D YHQ Y +G P
Sbjct: 100 VILTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEDLEVYVYKDRKVYHQGYKKGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ D GT IRF D ++FT + + T+ R RELAFLN ++I LR
Sbjct: 158 --QFDLKVIEETDDDNTGTVIRFKADPEIFTETTTYHYETLQQRTRELAFLNKGISITLR 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D E+ + + Y + GG++ YV+ LN +K+PLH+ + + D I +++ALQ+ +
Sbjct: 216 --DERGEEVREDTYHYEGGIKSYVEMLNENKEPLHEEPIYVHQTKDEIEVEIALQY-NKG 272
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +L YAN+I T +GGTH EG K +L+R LNS G SK +K+ LSGE REGLT
Sbjct: 273 FATNLLTYANNIHTYEGGTHEEGFKRALSRVLNSYGLNSKIIKEDKERLSGEDTREGLTA 332
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S++ +P+FEGQTKT+LGN EVR++VD+ E +L HP V ++ K + A A
Sbjct: 333 IVSIKHGDPQFEGQTKTKLGNSEVRQIVDKLFSELFERFLYEHPQVGRIVVEKGIMASHA 392
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR++ R+KS L SSLPGKLADCSS P SEIFIVEGDSAGGS K GRD Q
Sbjct: 393 RLAAKKAREVTRRKSALEISSLPGKLADCSSKDPSRSEIFIVEGDSAGGSTKSGRDSETQ 452
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE F RYHKI+++TDADV
Sbjct: 453 AILPLRGKILNVEKARLDRILNNNEIRSMITAFGTGIGGE-FDLSKARYHKIVLMTDADV 511
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y+ PPL+K+ +GKQ Y +++ EL+K+K+
Sbjct: 512 DGAHIRTLLLTFFYRFMRPLLEAGYVYIAQPPLFKLTQGKQKYYVFNERELEKLKAELEP 571
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI R+KGLGEM QLWETT+NPE R + Q+ ++DA EA+ VF LMG V+ R++
Sbjct: 572 TPKWSISRYKGLGEMNADQLWETTMNPENRAMLQVSLDDAIEADQVFEMLMGDVVENRRQ 631
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 632 FIEDNAVYANLD 643
>gi|392403099|ref|YP_006439711.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
gi|390611053|gb|AFM12205.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
Length = 668
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/555 (47%), Positives = 367/555 (66%), Gaps = 17/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKFG Y VSGGLHGVG+SVVNALSE +EV V RDG ++H ++RGK
Sbjct: 126 VVLTKLHAGGKFG--DGAYKVSGGLHGVGVSVVNALSEWVEVDVHRDGKQHHIAFNRGKT 183
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L ++GT + F D Q+F T +++ ++T++ R+RELAFLN + I +R
Sbjct: 184 RAPLKAK----GPSKKRGTTVTFLADSQIFDT-LEYRYDTLSSRLRELAFLNKNVKITIR 238
Query: 121 KEDSDPEKNQYNEYFF--AGGLEEYVQWLNTDKKPLHDVVGFR-KDVDGITIDLALQWCS 177
D + + E+ F GG+ E+V+ L K PL + + DGI ++LA+++C
Sbjct: 239 ----DTREKEVKEHVFQYKGGIVEFVKMLTEKKNPLQKKPIYAIQQKDGIQVELAIEYC- 293
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D YS+ + +AN+I T +GGTH+EG + +LTR LN KK K + L+G+ VREGL
Sbjct: 294 DTYSEQIFTFANAIHTREGGTHLEGFRTALTRALNEYKKKLGYDKKVEEPLTGDDVREGL 353
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
++S+ +PNP+FEGQTK +LGN EV+ +V V E L EY E +P ++ K + A
Sbjct: 354 VLVLSILIPNPQFEGQTKMKLGNGEVKGIVTSVVYEKLCEYFEENPQDAKRVIEKCMQAA 413
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A +AA++A++LVR+KS L + LPGKLADCS+ P++ E+FIVEGDSAGGSAKQGR+R
Sbjct: 414 LARIAARKAKELVRRKSALEGAGLPGKLADCSAREPKDCELFIVEGDSAGGSAKQGRNRH 473
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI NVE+ + + E+ LI A+G G+ G +F + LRYHKI+I+TDA
Sbjct: 474 FQAILPLKGKITNVEKTKLDKILGDGEVAALISAIGCGI-GAEFNIDKLRYHKIVIMTDA 532
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHI+TLLLTFF+R+ L ++G +Y+ PPLY V GK+ Y Y D E K+ F
Sbjct: 533 DVDGAHIQTLLLTFFFRHMPLLIEKGGLYIARPPLYLVSHGKEKFYAYSDQEKDKIIKGF 592
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + Y IQR+KGLGEM P QLWETT++P +R+L Q+ ++DA A+ F LMG V+ R
Sbjct: 593 KAESKYVIQRYKGLGEMNPEQLWETTMDPARRVLMQVSVDDAVIADETFIILMGDEVEPR 652
Query: 538 KELIQ-NAANLVNLD 551
+ I+ NA + LD
Sbjct: 653 RRFIEDNAKKVEELD 667
>gi|190710587|gb|ACE95124.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae]
Length = 627
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/548 (50%), Positives = 372/548 (67%), Gaps = 16/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LH V SVVNALS LEV V R+G ++QKY RG P
Sbjct: 91 VIMTVLHAGGKFGGGGYKVSGG--LHDVVASVVNALSTELEVFVHREGKIHYQKYERGIP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V L + D+ GT RF PD ++F +D +T+A R+RELAFLN KLTI
Sbjct: 149 VADLKV----IGDTDQTGTITRFKPDPEIFQETTVYDFDTLATRMRELAFLNRNIKLTIE 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E Q E+ + GG++ YV+ LN K+P+H+ V DGI ++++LQ+ +
Sbjct: 205 DKRE-----HKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQY-N 258
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ Y++ + + N+I T +GGTH G K +LTR +N G+K+ +KD D +L+GE VREGL
Sbjct: 259 EGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGL 318
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+S++ PNP+FEGQTKT+LGN E R + + E ++L +P+V I+ K A
Sbjct: 319 TAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAA 378
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A +AAK+AR+L R+KS L SSLPGKLADCSS P SEI+IVEGDSAGGSAKQGRDR
Sbjct: 379 RARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRH 438
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILPL+GKI+NVE+ + N+E++ +I A+G + G DF E RYHK+II+TDA
Sbjct: 439 FQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGG-DFDIEKARYHKVIIMTDA 497
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY + + + G IY+ PPL+K+++GK++QY Y+D EL+K+ +
Sbjct: 498 DVDGAHIRTLLLTFFYRYMRQIIECGNIYIAQPPLFKIQQGKKIQYAYNDKELEKILAEL 557
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
P+ IQR+KGLGEM P QLWETT++PE R L Q+ ++DA EA+ F LMG +V+ R
Sbjct: 558 PAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPR 617
Query: 538 KELIQNAA 545
+ IQ A
Sbjct: 618 RNFIQENA 625
>gi|429190218|ref|YP_007175896.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|448326129|ref|ZP_21515498.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
gi|429134436|gb|AFZ71447.1| DNA gyrase, B subunit [Natronobacterium gregoryi SP2]
gi|445613038|gb|ELY66749.1| DNA gyrase subunit B [Natronobacterium gregoryi SP2]
Length = 644
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/549 (48%), Positives = 373/549 (67%), Gaps = 10/549 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG Y + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVYRHAFEGGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++S + GT IRFWPD +F + +F +T+A R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMESDEETGTEIRFWPDGSIFESD-EFSFSTLANRLRELAFLNSGVRITLR 209
Query: 121 --KEDSDPEKNQYNE-YFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWC 176
+ED+D E Y + GG+ E+V++LN + +H+ V+ F + I +++A+Q
Sbjct: 210 DEREDADDAAGVATETYEYEGGIREFVEYLNETRSAMHETVIYFEDETQNIHVEVAMQ-A 268
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L GE +REG
Sbjct: 269 TKELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLSDLDENLKGEDIREG 328
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++S++ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E PD ++I++K++ A
Sbjct: 329 LTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLGTYFEEQPDTAEAIVTKAVEA 388
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 389 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNP 448
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TD
Sbjct: 449 DFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMATD 507
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY+V + +AE ++ +
Sbjct: 508 ADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTEAERDEIVAE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLW+TT+NP+ R+LKQ+ IEDAA A+ +FS LMG V+
Sbjct: 568 KCDGNPTQVQRFKGLGEMNPQQLWDTTMNPDNRILKQITIEDAAAADKMFSVLMGDAVEP 627
Query: 537 RKELIQNAA 545
RK+ I+ A
Sbjct: 628 RKQFIKENA 636
>gi|299820837|ref|ZP_07052726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM
20601]
gi|299817858|gb|EFI85093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM
20601]
Length = 646
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 280/556 (50%), Positives = 372/556 (66%), Gaps = 18/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG +Y+Q++ +G
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTDLEVYVHRDGQKYYQRFEQGNV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD ++FT FD +T+ R RELAFLN L I++
Sbjct: 161 VMDMEER----GETDYRGTIVHFKPDPEIFTETTVFDFDTLRTRARELAFLNKNLRISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
ED E +Y + GG+ YV+ LN K+ +H+ + G R+D I +++++Q+
Sbjct: 216 -EDKREEHQVRKDYHYEGGIRSYVEHLNKSKEVIHEPPIYLEGERED---IMVEISMQYN 271
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ ++ ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREG
Sbjct: 272 T-GFASNLISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREG 330
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IIS++ PNP+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A
Sbjct: 331 LTAIISIKHPNPQFEGQTKTKLGNSEARTITDKLFSEALNKFMMENPDVGKKIVEKGVVA 390
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A +AAKRARD+ R+ S L S+LPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR
Sbjct: 391 SRARMAAKRARDVARKTSGLEISNLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDR 450
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TD
Sbjct: 451 LFQAILPIRGKILNVEKARLDKILANEEIRTIFTAMGTGFGG-DFNVAKARYHKLIIMTD 509
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GK+V+Y Y D +L +S
Sbjct: 510 ADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKEVEYVYTDKQLDDYLAS 569
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
S+ Y+IQR+KGLGEM P QLWETT+NPE R L Q+ I DA +A+ F LMG RV+
Sbjct: 570 IGSDTKYAIQRYKGLGEMNPEQLWETTMNPEHRTLLQVNINDAIDADETFEMLMGDRVEP 629
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 630 RRKFIEENAQYVKNLD 645
>gi|78185902|ref|YP_373945.1| DNA gyrase subunit B [Chlorobium luteolum DSM 273]
gi|78165804|gb|ABB22902.1| DNA gyrase subunit B [Chlorobium luteolum DSM 273]
Length = 644
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/557 (47%), Positives = 371/557 (66%), Gaps = 26/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T++ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG + Q+Y RG P
Sbjct: 100 LVMTLIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAWFQRYHRGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + +GT+ F PD ++F +F + I R+RELAFLN L I ++
Sbjct: 158 ----EADVKEIGTTTERGTKTTFMPDSEIFKVT-EFRKDIIIDRMRELAFLNSNLKIVVQ 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQW 175
+ + E + F GGL+E+V + LN K+P++ + G + DG +++AL++
Sbjct: 213 DIEGEQET-----FHFEGGLKEFVLFTDENRLNLIKEPIY-IYG---EKDGTIVEIALEY 263
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ ++L+G+ +E
Sbjct: 264 -NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLALTGDDFKE 322
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+V P+FEGQTKT+LGN E + +V+ + E L E+ E +P+V+ I+ K
Sbjct: 323 GLTAVISVKVAEPQFEGQTKTKLGNSETQSIVESVLNEQLAEFAESNPNVIKMIIEKVKG 382
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGRD
Sbjct: 383 AAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRD 442
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+T
Sbjct: 443 RSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTNFGEEEFSAEKLRYGKIIIMT 502
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFF+R+ ++L + G +Y+ PPLY V+ GK+ QY +DD E +
Sbjct: 503 DADVDGAHIRTLLLTFFFRHMRSLIEAGKVYIAQPPLYLVKSGKEQQYAWDDDERNSISD 562
Query: 476 SF----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
S A IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+LMG
Sbjct: 563 SMKKMQKGKANVHIQRYKGLGEMNPEQLWGTTMDPEHRSLLQVSVENAMEADKVFSTLMG 622
Query: 532 ARVDTRKELIQNAANLV 548
+V+ R+E I+ A V
Sbjct: 623 DKVEPRREFIEKNARYV 639
>gi|443242346|ref|YP_007375571.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
gi|442799745|gb|AGC75550.1| DNA gyrase subunit B [Nonlabens dokdonensis DSW-6]
Length = 645
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/558 (46%), Positives = 371/558 (66%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+RDG + Q+Y RGK
Sbjct: 96 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKATVYRDGKIWEQEYERGKA 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D++GT + F PD+ +F I++++ T+A R+REL+FLN + I L
Sbjct: 154 MYP----VRAIGDTDKRGTDVTFTPDRSIFKQTIEYNYETLANRLRELSFLNKGIKIILT 209
Query: 121 -KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
D E N E F + GL+E++++L+ + P+ DV+ + +GI +++A+ + +
Sbjct: 210 DARHQDEEGNNITEVFQSEEGLKEFIRFLDDTRSPIIEDVIAMEGEKNGIPVEVAMIY-N 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D+YS+ + Y N+I T +GGTH+ G + LT TL S + +SG+ REGL
Sbjct: 269 DSYSENLHSYVNNINTHEGGTHLAGFRRGLTSTLKKYADGSGLLDKLKFDVSGDDFREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V + L +YLE HP+ +I+ K + A
Sbjct: 329 TAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSQMLEDYLEEHPNDAKTIVQKVILAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++K+V+ LPGKL+DCS T P E+F+VEGDSAGG+AKQGRDR
Sbjct: 389 TARHAARKAREMVQRKTVMSGGGLPGKLSDCSETDPTLCEVFLVEGDSAGGTAKQGRDRE 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K + LRYHKI+I
Sbjct: 449 FQAILPLRGKILNVEKAMQHKVFENEEIRNIYTALGVTIGTEEDSKALNLDKLRYHKIVI 508
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + +Y + D E ++
Sbjct: 509 MCDADIDGSHIATLILTFFFRYMKELVEAGYIYIATPPLYLVKKGAKKRYAWSDKERDEI 568
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+F A +IQR+KGLGEM QLW+TT+NPE R L+Q+ IE AEA+ VFS LMG
Sbjct: 569 ADNFGGGA--AIQRYKGLGEMNADQLWDTTMNPEFRTLRQISIESPAEADRVFSMLMGDE 626
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 627 VPPRREFIEKNAIYANID 644
>gi|187777362|ref|ZP_02993835.1| hypothetical protein CLOSPO_00918 [Clostridium sporogenes ATCC
15579]
gi|187774290|gb|EDU38092.1| DNA gyrase, B subunit [Clostridium sporogenes ATCC 15579]
Length = 637
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 386/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE V V RDG + QKY RG P
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEHCNVEVRRDGHIWLQKYERGIP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEDHGTKIYFKPDVEIFD-ELEFEYDTLAQRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A+Q+ +D
Sbjct: 209 DERYDKQEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDTDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFNLEKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 503 DGAHIRTLLLTFFYRYMKELVEEGHVYIAQPPLYRIYKAKKELYVYSDKELDEALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT+NPE R L Q+ IEDA A+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMDPEQLWETTMNPEHRTLLQVTIEDAMAADEIFTILMGTKVEPRR 622
Query: 539 ELIQNAAN-LVNLD 551
+ I+N A+ +VNLD
Sbjct: 623 DFIENNADKVVNLD 636
>gi|374812884|ref|ZP_09716621.1| DNA gyrase subunit B [Treponema primitia ZAS-1]
Length = 642
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/555 (49%), Positives = 368/555 (66%), Gaps = 16/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF +S Y VSGGLHGVG+SVVNALSE E V DG + Q+Y G P
Sbjct: 99 LVMTRLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSEWCEAFVHIDGKIHTQRYQIGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ DR+GT +RF D +F TT FD ++ R+RELAFLN L I +
Sbjct: 157 ----DAPTHEAGTTDRRGTVVRFKADTSIFETTTYNFD--ALSNRLRELAFLNKGLKITI 210
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
R E K+ E+ F GG++ +V +LN +K L+ + + DG+ ++ A+Q+ +D
Sbjct: 211 RDERLSTPKDH--EFKFDGGVKSFVDYLNENKNVLYREPIFIEGSRDGVEVECAIQY-ND 267
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y++ M + N I T +GGTH+ G K++LTRTLN KKSK K + SLSG+ VREGLT
Sbjct: 268 GYNEIMFSFVNDINTREGGTHLVGFKSALTRTLNEYLKKSKHAKKLEESLSGDDVREGLT 327
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++S +VPNP+FEGQTK +LGN EV+ +V+ V E L YL+ HPDV+ +IL KS+ A K
Sbjct: 328 AVLSTKVPNPQFEGQTKGKLGNSEVKGIVESLVNEQLELYLDQHPDVIGNILEKSILAAK 387
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A +AA++ARD R+K+ + S+ LPGKLADCS P E+FIVEGDSAGGSAK GR+R+F
Sbjct: 388 ARIAARQARDATRRKNAMDSAGLPGKLADCSEKDPSLCELFIVEGDSAGGSAKMGRNRQF 447
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAIL L GK+LNVE+ + NE++Q +I ++G G G +F +RYHKI+I+ DAD
Sbjct: 448 QAILSLFGKMLNVEKTRIEKVVTNEKLQPIIASIGAGC-GVEFDIAKIRYHKIVIMADAD 506
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSF 477
VDG+HIRTLLLTFFYRY L + G +Y+ +PPLYKV K+ Y YDD E + + S
Sbjct: 507 VDGSHIRTLLLTFFYRYMTALIERGHVYLAMPPLYKVNYEKKTFYAYDDEEKDRLLAESG 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+IQR+KGLGEM P QLW+TT++P QR + Q+ ++DA EA +F++LMG V R
Sbjct: 567 RDPEKVAIQRYKGLGEMNPDQLWDTTMDPAQRNIIQIHLDDAVEAERIFTTLMGEVVQPR 626
Query: 538 KELIQNAANLV-NLD 551
+E I+ A LV NLD
Sbjct: 627 REFIEENALLVANLD 641
>gi|254166743|ref|ZP_04873597.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|197624353|gb|EDY36914.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 648
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/570 (49%), Positives = 382/570 (67%), Gaps = 36/570 (6%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y ++GGLHGVG+ VVN LSE L+ + RDG Y Q Y RGKP
Sbjct: 95 VVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKAYIKRDGKIYFQWYERGKP 152
Query: 61 VTTLTCHVLPV------------DSKDRQ-----GTRIRFWPDKQVFTTAIQFDHNTIAG 103
C V V D D + GT IRF PD ++F T +F ++ +
Sbjct: 153 ----QCDVHVVGKIENGNFVWIEDGHDEKFKYSRGTYIRFKPDAEIFETT-EFKYSIVKK 207
Query: 104 RIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRK 162
++R+LAFLN + I L E S ++ + + GG+ E+V++LN P+H DVV +
Sbjct: 208 KLRDLAFLNRGIEITLEDERSGKKE----VFKYDGGIVEFVKFLNEGYNPIHRDVVYGKD 263
Query: 163 DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK 222
+ DGI ++ A+Q+ +D+ S+ +L + N+I T++GGTH+ G +++LT+ +N K +K
Sbjct: 264 EQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVEGGTHVSGFRSALTKVINDFAKSRNLLK 322
Query: 223 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 282
D SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V + L+ Y E H
Sbjct: 323 GID-SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSIVNKILSTYFEEH 381
Query: 283 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 342
PDV +I+SK+++A +A +AA++AR+L R+K L S LPGKLADCS PE +E+FIVE
Sbjct: 382 PDVATNIVSKAIAAARARIAARKARELARRKGYLESLDLPGKLADCSEEDPERAELFIVE 441
Query: 343 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFK 402
GDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G GV+ EDF
Sbjct: 442 GDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTGVR-EDFD 500
Query: 403 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 462
LRY KIII+TDADVDGAHIRTLLLTFFYRY L ++G IY+ PLY++++GK +
Sbjct: 501 YSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMPELIEKGHIYIAQAPLYRIQKGKNIY 560
Query: 463 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 522
Y Y D E ++ NA S+QRFKGLGEM P QLW+TT+NPE R L ++ IEDAAEA
Sbjct: 561 YVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMNPQQLWDTTMNPETRRLIRVTIEDAAEA 617
Query: 523 NVVFSSLMGARVDTRKE-LIQNAANLVNLD 551
+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 618 DRLFSILMGEQVGPRREFIIQHAKEVMNID 647
>gi|118587497|ref|ZP_01544922.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
gi|71466856|emb|CAH41002.1| DNA gyrase subunit B [Oenococcus oeni]
gi|118432147|gb|EAV38888.1| DNA gyrase, B subunit [Oenococcus oeni ATCC BAA-1163]
Length = 652
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/550 (48%), Positives = 363/550 (66%), Gaps = 11/550 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ T+LHAGGKF S Y VSGGLHGVG SVVNALS+ ++V V+RD Y+ + RG
Sbjct: 106 VFTILHAGGKF--DSKSYKVSGGLHGVGASVVNALSKEMDVRVYRDNKIYYMDFERGHIK 163
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T + P+ + ++GT + F PD +F I FD+ T+A RIRELAFLN L +++
Sbjct: 164 TEMKLLDEPM--RLKRGTIVHFAPDPDIFRETIVFDYRTLASRIRELAFLNKGLRLSITD 221
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
+ DP KN+ + + GG+ EYV++LN +K+PL + V + +GI +++ALQ+ +DA
Sbjct: 222 KRVDPVKNE--SFMYEGGIAEYVKFLNKNKQPLFPEPVYVEGEENGIQVEVALQY-TDAV 278
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++T++ + N+I T +GGTH G K +LTR +N KK +KD D LSGE VREG+T I
Sbjct: 279 AETLMSFTNNIHTHEGGTHETGFKMALTRIINDYVKKKGILKDSDDPLSGEDVREGITAI 338
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN + ++ V+ ++ +P+ +I +K L A KA
Sbjct: 339 VSIKHPDPQFEGQTKTKLGNTDAQQAVNHQFSTIFNRFMMENPETARAIANKGLIASKAR 398
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+ARDL R+KS L S+L GKLAD +S PE SE+FIVEGDSAGGSAKQGR R QA
Sbjct: 399 VAAKKARDLTRKKSGLEISALAGKLADNTSRDPEISELFIVEGDSAGGSAKQGRSRLTQA 458
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G GE+F YHK+II+TDADVD
Sbjct: 459 ILPIRGKILNVEKATLDKVLANEEIRSLFTAMGTGF-GEEFDISKAHYHKVIIMTDADVD 517
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY--DDAELKKVKSSFP 478
GAHIRTLLLT F+RY + L D G IY+ PPLY V G Q Y D EL + ++ P
Sbjct: 518 GAHIRTLLLTLFFRYMRPLIDAGYIYIAQPPLYGVAIGNSDQRVYLDSDEELDQYTATLP 577
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
++ IQR+KGLGEM VQLW+TT++P+ R L ++ E E + F LMG RV+ R+
Sbjct: 578 ASPKPRIQRYKGLGEMDAVQLWDTTMDPKHRRLLRVDPEYQPEVDTTFDMLMGDRVEPRR 637
Query: 539 ELIQNAANLV 548
E I++ A V
Sbjct: 638 EFIEDNAQFV 647
>gi|372211058|ref|ZP_09498860.1| DNA gyrase subunit B [Flavobacteriaceae bacterium S85]
Length = 645
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/561 (46%), Positives = 372/561 (66%), Gaps = 22/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK- 59
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ ++ TV R+G + Q+Y RGK
Sbjct: 96 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHVKATVHREGKIWEQEYERGKA 153
Query: 60 --PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
PV T V ++ GT + F PDK +F ++++ T+A R+RELA+LN +T+
Sbjct: 154 LYPVKT-------VGDSNKTGTEVTFIPDKSIFQQTTEYNYETLANRMRELAYLNKGITV 206
Query: 118 ALR-KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
L K D E N +E F + GL E+V++L+ ++ L DV+ + +GI +++A+
Sbjct: 207 TLTDKRHKDDEGNFISETFHSEDGLAEFVKYLDGTREQLTADVISMEGEKNGIPVEVAMV 266
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ + +Y++ + Y N+I T +GGTH+ G + LT TL S + +SG+ R
Sbjct: 267 YNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGMLSKLKFDVSGDDFR 325
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE HPD +I+ K +
Sbjct: 326 EGLTAIVSVKVAEPQFEGQTKTKLGNREVSAAVSQAVSEMLTDYLEEHPDDAKTIVQKVI 385
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AA +AR++V++K+V+ LPGKL+DCS T PE+ EIF+VEGDSAGG+AKQGR
Sbjct: 386 LAAQARHAATKAREMVQRKTVMSIGGLPGKLSDCSETDPEKCEIFLVEGDSAGGTAKQGR 445
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHK 410
DR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHK
Sbjct: 446 DREFQAILPLRGKILNVEKAMQHKVFENEEIKNMFTALGVTIGTEEDSKALNLSKLRYHK 505
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+ DADVDG+HI TL+LTFF+RY + + ++G +Y+ PPLY V++G + +Y +DD +
Sbjct: 506 VVIMCDADVDGSHIATLILTFFFRYMREMVEQGYVYIATPPLYLVKKGNKKEYAWDDNQR 565
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ F +A SIQR+KGLGEM QLW+TT+NPE R L+Q+ I+ EA+ VFS LM
Sbjct: 566 DMINMKFGGSA--SIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVSIDSDVEADRVFSMLM 623
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 624 GDEVPPRREFIEKNAKYANID 644
>gi|289596495|ref|YP_003483191.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
gi|289534282|gb|ADD08629.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469]
Length = 644
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/570 (49%), Positives = 382/570 (67%), Gaps = 36/570 (6%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAG KF Y ++GGLHGVG+ VVN LSE L+ + RDG Y Q Y RGKP
Sbjct: 91 VVMTVLHAGAKF--DKKAYRITGGLHGVGIHVVNFLSEWLKAYIKRDGKIYFQWYERGKP 148
Query: 61 VTTLTCHVLPV------------DSKDRQ-----GTRIRFWPDKQVFTTAIQFDHNTIAG 103
C V V D D + GT IRF PD ++F T +F ++ +
Sbjct: 149 ----QCDVHVVGKIENGNFVWIEDGHDEKFKYSRGTYIRFKPDAEIFETT-EFKYSIVKK 203
Query: 104 RIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRK 162
++R+LAFLN + I L E S ++ + + GG+ E+V++LN P+H DVV +
Sbjct: 204 KLRDLAFLNRGIEITLEDERSGKKE----VFKYDGGIVEFVKFLNEGYNPIHRDVVYGKD 259
Query: 163 DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVK 222
+ DGI ++ A+Q+ +D+ S+ +L + N+I T++GGTH+ G +++LT+ +N K +K
Sbjct: 260 EQDGIIVEFAMQY-NDSTSENLLAFVNTIHTVEGGTHVSGFRSALTKVINDFAKSRNLLK 318
Query: 223 DKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELH 282
D SL GE VREGLT +I V+ PNP+FEGQTK +LGN EV+ VV V + L+ Y E H
Sbjct: 319 GID-SLQGEDVREGLTAVIHVKHPNPQFEGQTKAKLGNSEVKGVVFSIVNKILSTYFEEH 377
Query: 283 PDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVE 342
PDV +I+SK+++A +A +AA++AR+L R+K L S LPGKLADCS PE +E+FIVE
Sbjct: 378 PDVATNIVSKAIAAARARIAARKARELARRKGYLESLDLPGKLADCSEEDPERAELFIVE 437
Query: 343 GDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFK 402
GDSAGGSAKQ RDR FQAILPLRGKILNVE+ ++KN EI+ LI A+G GV+ EDF
Sbjct: 438 GDSAGGSAKQARDRHFQAILPLRGKILNVEKARIDKVFKNNEIRALISAIGTGVR-EDFD 496
Query: 403 KEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQ 462
LRY KIII+TDADVDGAHIRTLLLTFFYRY L ++G IY+ PLY++++GK +
Sbjct: 497 YSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMPELIEKGHIYIAQAPLYRIQKGKNIY 556
Query: 463 YCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEA 522
Y Y D E ++ NA S+QRFKGLGEM P QLW+TT+NPE R L ++ IEDAAEA
Sbjct: 557 YVYSDEEKEEKLRE-LGNA--SVQRFKGLGEMNPQQLWDTTMNPETRRLIRVTIEDAAEA 613
Query: 523 NVVFSSLMGARVDTRKE-LIQNAANLVNLD 551
+ +FS LMG +V R+E +IQ+A ++N+D
Sbjct: 614 DRLFSILMGEQVGPRREFIIQHAKEVMNID 643
>gi|50364821|ref|YP_053246.1| DNA gyrase subunit B [Mesoplasma florum L1]
gi|50363377|gb|AAT75362.1| DNA gyrase subunit B [Mesoplasma florum L1]
Length = 635
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 370/553 (66%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS ++V V R+G +HQ +S G
Sbjct: 93 LVFTQLHAGGKF--DSDSYKISGGLHGVGASVVNALSLYVDVQVKREGKIHHQVFSGG-- 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + + GT +RF PD ++F +FD+ TI ++++L++LN L I L
Sbjct: 149 -GTQQTEIEIIGETNETGTIVRFKPDPEIFLEGTEFDYETIRNKVKQLSYLNKGLVIEL- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
+D +++ EY F G+ +YV+ N K ++ + + D D I +++ALQ+ ++
Sbjct: 207 ---NDLRIDKHVEYHFPNGILDYVKEKNETKVKINPSIFYVDDKHDDIEVEVALQYNAE- 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G++ SL R +N +K T S + ++EG+ C
Sbjct: 263 YQENLITFVNNINTHEGGTHEDGLRQSLVRVINRYAEKVATGNKPAAKYSWDDIKEGMVC 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S+R +P++EGQTKT+L NP+ +K VD V + E+L P+ +I+ K+ +A KA
Sbjct: 323 IVSIRHTDPQYEGQTKTKLANPDAKKAVDAVVGDAFEEFLLKSPEDAKAIIDKNANAQKA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA+RAR+ R+KS L + SLPGKLADC S PE +E+++VEGDSAGGSAK GR+RRFQ
Sbjct: 383 RIAAQRAREETRRKSALDTFSLPGKLADCESKDPEIAELYLVEGDSAGGSAKTGRNRRFQ 442
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER E + N EI++++ A+G G+K ED LRY KI+I+TDADV
Sbjct: 443 AILPLRGKVLNVERVAEVRAFANNEIKSIVTAIGTGIK-EDIDLSKLRYGKIVIMTDADV 501
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +G +Y+ PPLYK+E GK+V Y Y D EL+++K+
Sbjct: 502 DGAHIRTLLLTFFYRYMKQLVVDGHVYIAQPPLYKIEAGKKVAYAYSDVELEELKAGDFK 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
++ ++IQR+KGLGEM P+QLWETT++PE+R + Q+ +EDAA AN VFS LMG + R+
Sbjct: 562 DSRFTIQRYKGLGEMDPIQLWETTMDPEKRTMLQIKLEDAAIANEVFSDLMGEDPELRRN 621
Query: 540 LIQNAANLV-NLD 551
IQ A V N+D
Sbjct: 622 YIQENAEFVENID 634
>gi|310825640|ref|YP_003957997.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308737374|gb|ADO35034.1| hypothetical protein ELI_0009 [Eubacterium limosum KIST612]
Length = 640
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/529 (48%), Positives = 369/529 (69%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS L V V ++ YHQ +++GK + L + +R GT + F
Sbjct: 121 LHGVGVSVVNALSSELTVEVKQNKKIYHQTFAKGKKTSELEVTG----NTNRTGTTVHFQ 176
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD +F + +D + + R+RELAFLN ++I L E + EK + Y + GG+ Y+
Sbjct: 177 PDPDIFDELV-YDFDVLEHRLRELAFLNKGVSITLADE-REAEKRK-ETYCYEGGIRSYI 233
Query: 145 QWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+++N +K PL++ + + K++D ++++A Q+ + YS+ + YAN+I T +GG+H+ G
Sbjct: 234 EYMNKNKDPLYEQIAYYEKEMDDYSLEIAFQYTA-GYSENIYSYANNIYTPEGGSHLNGF 292
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K++LTRT+N+ +K+ +K D +L+GE VREGLT IIS+++ +P+FEGQTKT+LGNPEV
Sbjct: 293 KSALTRTINTYARKNNYIKGNDKNLTGEDVREGLTAIISIKLLDPQFEGQTKTKLGNPEV 352
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+ +V+ V + L+ +LE +P + +++ K+LSA +A AAK+AR+L R+KS L +++LPG
Sbjct: 353 KGIVETIVGDELSAFLEENPTIAKTVIEKTLSASRAREAAKKARELTRRKSALDTTALPG 412
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADC P SEIFIVEGDSAGGSAK GRD R QAILPLRGKILNVE+ + +
Sbjct: 413 KLADCREKDPSMSEIFIVEGDSAGGSAKSGRDSRIQAILPLRGKILNVEKSRLDRILTAD 472
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
++++I A G GV GEDF E RYHKIII+TDADVDGAHIRTLLLTFFYRY + L +EG
Sbjct: 473 TLKSMITAFGTGV-GEDFNVEKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRGLIEEG 531
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPL+KV RG+ V+Y Y++ L K+ + Y+IQR+KGLGEM QLWETT
Sbjct: 532 YVYIAQPPLFKVARGQHVEYVYNEKALDKMFED-KDRSKYTIQRYKGLGEMDAHQLWETT 590
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
++P R+L ++ IEDAA A+ VF+ LMG +V RKE I+ NAA + NLD
Sbjct: 591 MDPSVRILNRVNIEDAAYADEVFTILMGDKVQPRKEFIERNAAKVKNLD 639
>gi|448340252|ref|ZP_21529225.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
gi|445630558|gb|ELY83819.1| DNA gyrase subunit B [Natrinema gari JCM 14663]
Length = 642
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/548 (47%), Positives = 372/548 (67%), Gaps = 10/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRHAFEAGEP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ D GT IRFWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 151 VGDME-RVRDMEPDDETGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNSGVRITLR 208
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+E++D Y + GG+ E+V +LN + +HD V+ F + I +++A+Q +
Sbjct: 209 DEREETDAGDPVTETYEYDGGIREFVNYLNETRSAMHDDVIYFEDEAQNIQVEVAMQ-AT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 268 EELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDDNLKGEDIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++ A
Sbjct: 328 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIVAKAVEAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 388 KARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNPD 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 448 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKKIIMATDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE + +
Sbjct: 507 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDAIVAEK 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 567 CDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLMGDAVEPR 626
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 627 KQFIKDHA 634
>gi|184154481|ref|YP_001842821.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227514123|ref|ZP_03944172.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260662542|ref|ZP_05863437.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|385811790|ref|YP_005848181.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
gi|183225825|dbj|BAG26341.1| DNA gyrase subunit B [Lactobacillus fermentum IFO 3956]
gi|227087494|gb|EEI22806.1| ATP-hydrolyzing DNA topoisomerase [Lactobacillus fermentum ATCC
14931]
gi|260553233|gb|EEX26176.1| DNA gyrase, B subunit [Lactobacillus fermentum 28-3-CHN]
gi|299782689|gb|ADJ40687.1| DNA gyrase subunit B [Lactobacillus fermentum CECT 5716]
Length = 649
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/553 (48%), Positives = 363/553 (65%), Gaps = 12/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFG + GY VSGGLHGVG SVVNALS L+V V R G EY+ ++RG
Sbjct: 105 VFTVLHAGGKFG--NGGYKVSGGLHGVGASVVNALSTELDVKVARQGKEYYMDFARGHVN 162
Query: 62 TTLTCHVLPVD-SKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + V+ D + GT + F PD ++F ++ NT+ R+RELAFLN L I +
Sbjct: 163 TAMK--VIKDDLPQSAHGTTVHFVPDPEIFRETTVYNINTLIDRLRELAFLNKGLKITV- 219
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED K + + + GG+ YV++LN + L D + + GIT++++LQ+ D
Sbjct: 220 -EDRREGKEKQESFHYEGGIRHYVEFLNEGHELLFDPPIYVEGEYKGITVEVSLQYTDD- 277
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y +L + N+I T +GGTH G K +LTR +N G+KS +K +++LSGE VREGLT
Sbjct: 278 YRSNLLTFTNNIHTYEGGTHETGFKTALTRVINDYGRKSGQIKG-NVTLSGEDVREGLTA 336
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++ PNP+FEGQTKT+L N + R D E +T ++ +PDV I+ K + A KA
Sbjct: 337 VVSIKHPNPQFEGQTKTKLSNSDARTATDHIFAETMTRFMMENPDVARKIVEKGMLASKA 396
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR++ R+KS L S+LPGKLAD +S P SE+FIVEGDSAGGSAKQGR R Q
Sbjct: 397 RDAAKRAREVTRKKSGLEISNLPGKLADNTSKDPAISELFIVEGDSAGGSAKQGRSRLTQ 456
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI++L ALG G G+DF YHK+II+TDADV
Sbjct: 457 AILPIRGKILNVEKASLNRVLANEEIRSLFTALGTGF-GDDFDVNKANYHKLIIMTDADV 515
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYR+ + + ++G +Y+ PPLY+V +GK V+Y +D EL++V +S
Sbjct: 516 DGAHIRTLLLTLFYRFMRPMIEKGYVYIAQPPLYQVRQGKFVKYIENDEELERVVNSLQP 575
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM QLWETT++P R L ++ ++DA A+ +F LMG +V R+E
Sbjct: 576 SPKPVIQRYKGLGEMDAEQLWETTMDPANRHLLRVKLDDAKAADEIFQMLMGTKVGPRRE 635
Query: 540 LIQNAANLV-NLD 551
I+ A V NLD
Sbjct: 636 FIEENATFVENLD 648
>gi|338811356|ref|ZP_08623574.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
gi|337276646|gb|EGO65065.1| DNA topoisomerase IV, B subunit [Acetonema longum DSM 6540]
Length = 637
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/553 (49%), Positives = 377/553 (68%), Gaps = 16/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALSE LEV V R+G Y ++ RG
Sbjct: 98 VVMTVLHAGGKFGGE--GYKVSGGLHGVGVSVVNALSEWLEVQVKREGKIYQMRFERGYT 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + GT + F PD Q+F + + +T+ R+RELAFLN L I L
Sbjct: 156 SQAMK----QIGETTETGTTVTFKPDAQIFEETV-YSFDTLKHRLRELAFLNKGLKITL- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
+D + E+ F GG+ +V+ LN K LH + + + D +++ALQ+ +D+
Sbjct: 210 ---TDERSGESREFCFEGGIVSFVEHLNHSKDVLHPKPIYVEGIKDTTVVEIALQY-NDS 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + + N+I T +GGTH+ G K +LTRT+N +K +K+ D +LSGE VREGLT
Sbjct: 266 YNENIFTFVNNINTQEGGTHLSGFKTALTRTMNDFARKLNLLKENDENLSGEDVREGLTG 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++S++V P+FEGQTK++LGN E++ +VD E L+E+ E +P V I+ K++ A +A
Sbjct: 326 VVSLKVQQPQFEGQTKSKLGNSEIKGIVDTLFSEGLSEHFEENPSVTRKIIEKAILASRA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+ L S+LPGKLADCSS P ++EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 386 RDAARKARDLTRRKTALEVSALPGKLADCSSRDPMQTEIYLVEGDSAGGSAKQGRDRRFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + NEEI+ +I A G G+ GE+F E RY +III+TDADV
Sbjct: 446 AILPLRGKILNVEKARLDRILNNEEIRTMITAFGSGI-GEEFDLEKSRYGRIIIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L + G +Y+ PPLY V++GK+ Y Y D E+ ++ +
Sbjct: 505 DGAHIRTLLLTFFYRYMKPLIEAGRVYIAQPPLYLVKKGKEHWYLYSDPEMDQLLAKIGR 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ S+QR+KGLGEM P QLWETT+NPE R Q+ ++DA EA+ +F+ LMG +V+ R++
Sbjct: 565 ENI-SVQRYKGLGEMNPEQLWETTMNPEGRTNLQVTLDDAMEADEIFTILMGDKVEPRRK 623
Query: 540 LIQNAANLV-NLD 551
I++ A+ V NLD
Sbjct: 624 FIEDYAHRVRNLD 636
>gi|124008106|ref|ZP_01692804.1| DNA gyrase, B subunit [Microscilla marina ATCC 23134]
gi|123986354|gb|EAY26167.1| DNA gyrase, B subunit [Microscilla marina ATCC 23134]
Length = 659
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/562 (46%), Positives = 375/562 (66%), Gaps = 20/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L TV R+G + Q+Y +G P
Sbjct: 106 VVMTVLHAGGKFDKDT--YQVSGGLHGVGVSCVNALSTLLRATVHREGKIFQQEYKQGDP 163
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
T + + D+ GT I F PD +FT AI++ + TI+ R+REL++LN +LT+
Sbjct: 164 QTEVEV----IGESDKTGTVIHFVPDATIFT-AIEYKYETISQRLRELSYLNKGIRLTMV 218
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLN-TDKKPLHDVVGFRKDVDGITIDLALQWCS 177
+ + K ++ GGL E+V++L+ T + L + + + G+ + +A + +
Sbjct: 219 DHRVKGEDGKALTEDFLSEGGLTEFVRYLDETRQSFLPEPIYVEGEKSGVPVQVAFTY-N 277
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+YS+ + Y N+I TI+GGTHI G + +LTRTL S K ++ + ++G+ REGL
Sbjct: 278 HSYSENVYSYVNNINTIEGGTHISGFRRALTRTLKSYADKEGMLEKAKVDVTGDDFREGL 337
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VVD + E L+++LE +P SI+ K + A
Sbjct: 338 TAVISVKVAEPQFEGQTKTKLGNSEVMGVVDNATSEALSKFLEENPKQAKSIIQKVILAA 397
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+VL S LPGKLADCS P E+++VEGDSAGGSAKQGRDR
Sbjct: 398 QARHAARKAREMVQRKNVLSGSGLPGKLADCSEKDPGLCELYLVEGDSAGGSAKQGRDRN 457
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
QAILPLRGKILNVE+ E +Y NEEI+N+I ALG+ +D K E LRYHKIII
Sbjct: 458 TQAILPLRGKILNVEKAQEYKIYDNEEIKNIITALGVTFGKDDDDKALNMEKLRYHKIII 517
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE---- 469
+TDADVDG+HIRTL+LTFF+RY + L + G +Y+ +PP Y V++GK+ Y ++D +
Sbjct: 518 MTDADVDGSHIRTLILTFFFRYMRDLIESGYVYIALPPFYLVKKGKKELYAWNDDDRDVA 577
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+K++ + +++ +QR+KGLGEM P QLWETT+NPE R LKQ+ IE AA A+ +FS L
Sbjct: 578 IKELAGNGKPESVH-VQRYKGLGEMNPEQLWETTMNPENRSLKQVTIESAAGADHLFSML 636
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A N+D
Sbjct: 637 MGDDVPPRREFIEENAKYANVD 658
>gi|289433379|ref|YP_003463251.1| DNA gyrase subunit B [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169623|emb|CBH26157.1| DNA gyrase, B subunit [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 646
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/553 (50%), Positives = 371/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I TVLHAGGKFGG S LHGVG SVVNALS LEV V R+G +Y+Q++ RG
Sbjct: 103 VIFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTYLEVYVHREGKKYYQRFERGDV 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D +GT + F PD Q+F+ +FD +T+ R RELAFLN LTI++
Sbjct: 161 VMDMEEQ----GETDYRGTIVHFTPDPQIFSETTEFDFDTLRTRTRELAFLNRGLTISI- 215
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
ED E ++ + GG+ YV+ LN K +H+ + + D I +++++Q+ +
Sbjct: 216 -EDKREEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S ++ +AN+I T +GGTH G K +LTR +N +++K KD D +LSGE VREGLT
Sbjct: 274 FSSNIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKVFKDSDDNLSGEDVREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D+ E L +++ +PDV I+ K + A +A
Sbjct: 334 IISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASRA 393
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAKRAR++ R+ S L SSLPGKLADCSS PE SE++IVEGDSAGGSAKQGRDR FQ
Sbjct: 394 RLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQ 453
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + NEEI+ + A+G G G DF RYHK+II+TDADV
Sbjct: 454 AILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGG-DFDVSKSRYHKLIIMTDADV 512
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYRY + L D G IY+ PPLY+++ GKQ++Y Y D +L+ +S
Sbjct: 513 DGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDYLASLDK 572
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ Y IQR+KGLGEM P QLW+TT+NPE R L Q+ I+DA +A+ F LMG RV+ R++
Sbjct: 573 DTKYGIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMGDRVEPRRK 632
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 633 FIEENAQYVKNLD 645
>gi|150387859|ref|YP_001317908.1| DNA gyrase subunit B [Alkaliphilus metalliredigens QYMF]
gi|149947721|gb|ABR46249.1| DNA gyrase, B subunit [Alkaliphilus metalliredigens QYMF]
Length = 635
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/552 (49%), Positives = 378/552 (68%), Gaps = 15/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFGG S LHGVG+SVVNALSE +EV V +DG Y Q+Y RG P+
Sbjct: 96 VMTVLHAGGKFGGGGYKVSGG--LHGVGISVVNALSEYVEVEVRKDGKLYKQRYERGIPI 153
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T V V GT I F D ++F I + + T+ R+RE+AFLN + I LR
Sbjct: 154 T----DVQEVGETTETGTTITFKADSEIFE-EILYVYTTLENRLREMAFLNKGIKITLR- 207
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDAY 180
D E+ + + + GG++E+V LN +++ L D V+ F K +G +++ALQ+ AY
Sbjct: 208 -DLREEEVMESSFRYDGGIQEFVMHLNRNREALIDKVIYFEKQKEGSVVEVALQYTG-AY 265
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + YAN+I T +GGTH+ G KA LTR +N +K+ +K+K+I+L GE +REGLT I
Sbjct: 266 TENIFSYANTINTHEGGTHLSGFKAGLTRVINEYARKNGILKEKEINLLGEDIREGLTAI 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++ +P+FEGQTKT+LGN E++ +V+ S +YL +LE +P I+ KSL A +A
Sbjct: 326 ISVKMADPQFEGQTKTKLGNSEMKGIVESSTSQYLEAFLEENPHEAKIIIEKSLRAQRAR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+AR+L R+K L +++LPGKLADC+ P SEI+IVEG+SAGGSAKQGRDR QA
Sbjct: 386 EAAKKARELTRRKGALENTALPGKLADCAEKDPALSEIYIVEGNSAGGSAKQGRDRATQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + + EI+N+I A G G+ G +F E +RYHKI+I+TDADVD
Sbjct: 446 ILPLRGKILNVEKSRLDRILGSAEIRNMITAFGTGI-GIEFDIEKVRYHKIVIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY K L + G +Y+ PPLYK+++GK Y Y D E++K+ +
Sbjct: 505 GAHIRTLLLTFFFRYMKPLIELGYVYIAQPPLYKLKKGKVENYAYSDEEMQKIIVQMGGS 564
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A IQR+KGLGEM P QLW+TT+NPE R Q+ IEDAA A+ +F++LMG +V+ R++
Sbjct: 565 A--DIQRYKGLGEMNPEQLWDTTMNPETRTFLQVSIEDAAGADDIFNTLMGDKVEPRRQF 622
Query: 541 I-QNAANLVNLD 551
I QN+ + NLD
Sbjct: 623 IEQNSKYVTNLD 634
>gi|340618721|ref|YP_004737174.1| DNA gyrase subunit B [Zobellia galactanivorans]
gi|339733518|emb|CAZ96895.1| DNA gyrase, subunit B [Zobellia galactanivorans]
Length = 650
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/558 (45%), Positives = 373/558 (66%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+SVVNALS+ L+ TV+RDG + Q+Y RGK
Sbjct: 101 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSVVNALSDRLKATVYRDGKIWEQEYERGKA 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + + +GT + F PD Q+F I++ + T+A R+REL+FLN +TI++
Sbjct: 159 LYP----VKSIGETEERGTMVTFHPDDQIFQQTIEYSYETLANRMRELSFLNKGVTISIT 214
Query: 121 KEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
EK ++ +E F++ GL+E+V++L+ +++PL V+ + + I +++A+ + +
Sbjct: 215 DRRQKDEKGEFLSETFYSDEGLKEFVKFLDGNREPLIQSVISMEGEKNDIPVEVAMIYNT 274
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I T +GGTH+ G + LT TL S ++ + G+ REGL
Sbjct: 275 -SYTENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGMLEKLKFEVQGDDFREGL 333
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+SV+V P+FEGQTKT+LGN EV V Q+V E L++YLE HPD I+ K + A
Sbjct: 334 TAIVSVKVAEPQFEGQTKTKLGNREVSSAVSQAVSEMLSDYLEEHPDDAKVIVQKVILAA 393
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA +AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+AK GRDR+
Sbjct: 394 QARHAATKAREMVQRKTVMSIGGLPGKLSDCSEQDPTQCEVFLVEGDSAGGTAKMGRDRK 453
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + ED K E LRYHK++I
Sbjct: 454 FQAILPLRGKILNVEKAMQHKVFENEEIKNIYTALGVTIGTEDDSKALNLEKLRYHKVVI 513
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G + +Y + D E ++
Sbjct: 514 MCDADVDGSHIETLILTFFFRYMRELIEGGHVYIATPPLYLVKKGSKKRYAWSDKERDEI 573
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
S+ SIQR+KGLGEM QLW+TT+NPE R L+Q+ I++A E + VFS LMG
Sbjct: 574 ADSYSGGV--SIQRYKGLGEMNAEQLWDTTMNPEFRTLRQITIDNATETDRVFSMLMGDE 631
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 632 VPPRREFIEKNAVYANID 649
>gi|448410257|ref|ZP_21575122.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
gi|445671953|gb|ELZ24532.1| DNA gyrase subunit B [Halosimplex carlsbadense 2-9-1]
Length = 638
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/547 (48%), Positives = 378/547 (69%), Gaps = 13/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALSE L+V V RDG Y + + +G P
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLDVEVKRDGAVYRESFEQGAP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V +D+ + GT IRFWPD ++F A ++D++T+ R+RELAFLN + I L
Sbjct: 153 QDGLE-RVRDMDADEGTGTTIRFWPDTEIFE-ADEYDYSTLESRLRELAFLNSGVEITL- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + + + GG+ E+V++LN K+PLH +VV F + I +++ALQ ++
Sbjct: 210 ---TDERDGTADTFRYEGGIREFVEYLNETKEPLHQEVVYFEDEDQDIHVEVALQ-ATNE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GGTH+ G K +LTR +N +++ + + D +L G+ +REGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRIVNDYAEENSLLGEIDGTLKGDDIREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV+ P+P+FEGQTKT+LGN EVR +V+ +V + L Y E HPD + I+ K++ A KA
Sbjct: 326 VISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHDGLGTYFEEHPDTAEVIVQKAVEAAKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A++L R+KS L S++LPGKL+DC + PE++E+FI EGDSAGGSAKQGR+ FQ
Sbjct: 386 RKAAKKAKELTRRKSALDSTALPGKLSDCQTRDPEDAELFITEGDSAGGSAKQGRNPEFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILP+RGKILNVE+ + +N EI+ +I A+G G+ G++F E RY KI+++TDADV
Sbjct: 446 AILPIRGKILNVEKHRLDRILENNEIRAMITAIGTGI-GDEFDIEEARYEKIVLMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELKKVKSSFP 478
DGAHIRTLLLTFFYR+ + L + G +Y PPLY+V RG+ D+ + V+
Sbjct: 505 DGAHIRTLLLTFFYRHMRPLLEAGYVYAAQPPLYRVRYRGETYDAMSDEERDRIVEEKCD 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N +QRFKGLGEM P QLW+TT++P+QR+LKQ+ IEDAA A+ +FS LMG V+ RK
Sbjct: 565 GNPT-QVQRFKGLGEMNPQQLWDTTMDPQQRILKQITIEDAAAADKMFSVLMGDAVEPRK 623
Query: 539 ELIQNAA 545
+ I++ A
Sbjct: 624 QFIKDHA 630
>gi|294508443|ref|YP_003572501.1| DNA gyrase subunit B [Salinibacter ruber M8]
gi|294344771|emb|CBH25549.1| DNA gyrase subunit B [Salinibacter ruber M8]
Length = 698
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/555 (46%), Positives = 371/555 (66%), Gaps = 9/555 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+SVVNAL+ EVTVWRDG + Q Y G P
Sbjct: 148 VVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVVNALASRFEVTVWRDGSVWEQNYLCGVP 205
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V P+++ + GTRIRFWPD +F T +F T++ R+RELAFLN + I +
Sbjct: 206 EDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT-EFRFETLSDRLRELAFLNAGVRIRVE 263
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDA 179
+ E Y G+ +V +L+ + + D + + DG + ++LA+Q+ +D
Sbjct: 264 DHREEDEGLARETYHSEEGIIGFVDYLDEARDSILDETIYIAETDGEVPVELAMQY-NDE 322
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L + N+I T +GGTH+ G + +LTRTL +K+ + D LSG+ REGLT
Sbjct: 323 YNKNVLSFVNNINTHEGGTHVTGFRRALTRTLKRYAQKNDMLSDLKFDLSGDDFREGLTA 382
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV+V P+FEGQTKT+LGN +V+ +V+ + L +LE HPD + I+ K + A +A
Sbjct: 383 VLSVKVSEPQFEGQTKTKLGNSDVQGIVESLINTELGRWLEDHPDQAERIIEKVIQAAEA 442
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV++K SLPGKLADCSS PEE E+++VEGDSAGGSAKQ RDR FQ
Sbjct: 443 RAAARKARELVQRKDAFSGGSLPGKLADCSSRDPEEGELYLVEGDSAGGSAKQARDRHFQ 502
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHKIIILTDA 417
AILPLRGKILNVE+ + ++++IQN++ ALG G+ E+F +RYHKI+++TDA
Sbjct: 503 AILPLRGKILNVEKARLDRILEHDQIQNIVTALGTGLTSTEEEFNMNEMRYHKIVMMTDA 562
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIR+LLLTFFYR + L ++G IY+ +PPLY+++ G Q YC+ D E++ +
Sbjct: 563 DVDGAHIRSLLLTFFYRQLRPLIEKGNIYIALPPLYRIQNGSQEIYCWSDEEMQTRMAEL 622
Query: 478 PSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
++ S+QR+KGLGEM P QLW TT+NPE R ++Q+ I+DAA A+ +FS+LMG V+
Sbjct: 623 RADGNSPSMQRYKGLGEMNPEQLWTTTMNPETRKIQQVTIQDAAAADRLFSTLMGDSVEP 682
Query: 537 RKELIQNAANLVNLD 551
R+E I+ A +D
Sbjct: 683 RREFIERNAKYATID 697
>gi|345883105|ref|ZP_08834553.1| DNA gyrase, B subunit [Prevotella sp. C561]
gi|345044076|gb|EGW48124.1| DNA gyrase, B subunit [Prevotella sp. C561]
Length = 657
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/567 (46%), Positives = 379/567 (66%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVFRNGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD +F+T + + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETDKTGTRQQFWPDPDIFSTTV-YQWSIVARRMRELAYLNAGIKITLT 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + I I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKAYADNDPQISKQLEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALTDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYRY + + G +Y+ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEHGHLYIATPPLYKCTYKKVSEYCYTEQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A + K + + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFIDKYANGDEEDKAIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEKNATYANID 656
>gi|403389401|ref|ZP_10931458.1| DNA gyrase subunit B [Clostridium sp. JC122]
Length = 635
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/554 (49%), Positives = 389/554 (70%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE V V RDG + + +SRGK
Sbjct: 94 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEICTVEVKRDGHIWKETFSRGKV 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ D GTRI F D ++F + +D++T++ R+REL+FLN + I L
Sbjct: 152 LSPFEV----AGDTDDHGTRIYFKADPEIFDD-VTYDYDTLSQRLRELSFLNKGIRITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
+D + + E+ + GG++ +V++LN +K +H+ + + + D T+++ALQ+ +D+
Sbjct: 206 ---TDEREGKSQEFHYEGGIKSFVEYLNRNKGKIHNEPIYIEGIKDDCTVEIALQY-NDS 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G KA+LTR +N KK +K+ D +LSGE VREGLT
Sbjct: 262 YNENLFSFANNIDTIEGGTHLVGFKAALTRVINDYAKKFGHLKENDKNLSGEDVREGLTA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++ +P+FEGQTKT+LGN +VR +V+ + +T +LE +P V SI+ K L+A +A
Sbjct: 322 VVSVKITDPQFEGQTKTKLGNSQVRGIVESIANDSITSFLEENPQVGKSIIDKGLNAARA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KSVL S+SLPGKLADCSS PEE EI+IVEGDSAGGSAKQGR+R+FQ
Sbjct: 382 REAAKKARELTRRKSVLESTSLPGKLADCSSKNPEECEIYIVEGDSAGGSAKQGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ M ++ I+++I A G G+ G+DF +RYHKIII+TDADV
Sbjct: 442 AILPLRGKIMNVEKQRLDKMLNSDTIKSMITAFGGGI-GKDFDVSKIRYHKIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFP 478
DGAHIRTLLLTFFYRY + L DEG +Y+ PPLY++++GK Y Y D EL+ ++
Sbjct: 501 DGAHIRTLLLTFFYRYMRELVDEGHVYIAQPPLYRLKKGKNEYYTYSDKELENLIQEVGG 560
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
++ IQR+KGLGEM QLW+TT+NPE R L ++ +EDA A+ +F+ LMG +V+ R+
Sbjct: 561 KDSSVDIQRYKGLGEMNAEQLWDTTMNPENRTLLKVDVEDAMAADEIFTILMGDKVEPRR 620
Query: 539 ELI-QNAANLVNLD 551
E I +NA ++NLD
Sbjct: 621 EFIEENAKKVINLD 634
>gi|345881483|ref|ZP_08833001.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
gi|343919448|gb|EGV30195.1| DNA gyrase, B subunit [Prevotella oulorum F0390]
Length = 656
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/567 (46%), Positives = 376/567 (66%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVYRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V ++GTR +FWPD +FTT F + +A R+RELA+LN + I LR
Sbjct: 156 LYPVKV----VGETTKRGTRQQFWPDPTIFTTTT-FKWDIVASRMRELAYLNAGIRITLR 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNEEGKTREEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKAYADAEPSIAKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAKKICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++KSV+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKSVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCTYKKVSEYCYTEQQ 569
Query: 470 L-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
K V+ AL++ QR+KGLGEM P QLWETT++P QR+LKQ+ I++AAEA+
Sbjct: 570 RQAFIDKYVEGKEDDKALHT-QRYKGLGEMNPDQLWETTMDPAQRLLKQVTIQNAAEADE 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+ I+ A N+D
Sbjct: 629 IFSMLMGDDVEPRRVFIEENATYANID 655
>gi|163786113|ref|ZP_02180561.1| DNA gyrase subunit B [Flavobacteriales bacterium ALC-1]
gi|159877973|gb|EDP72029.1| DNA gyrase subunit B [Flavobacteriales bacterium ALC-1]
Length = 649
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/561 (45%), Positives = 368/561 (65%), Gaps = 22/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK- 59
+++T + AGGKF S Y VSGGLHGVG+S VNALSE L+ TV+R+G Y Q+Y RGK
Sbjct: 100 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLKATVFREGKVYEQEYERGKA 157
Query: 60 --PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
PV T D++GT + F PD +FT ++++++T+A R+RELA+LN +T+
Sbjct: 158 MYPVKT-------TGDTDKRGTTVTFKPDSTIFTQTLEYNYDTLASRLRELAYLNKGITV 210
Query: 118 ALRKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
L + E + F GL+E++++L+ + PL DV+ F + +G+ +++A+
Sbjct: 211 HLIDKRHTKEDGSFEGETFHSKEGLKEFIKFLDATRDPLMKDVIAFEGEKNGVPVEVAMI 270
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ + +Y++ + Y N+I T +GGTH+ G + LT TL S + ++G+ R
Sbjct: 271 YNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKFADSSGMLDKLKFDVAGDDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT IISV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE HPD +I+ K +
Sbjct: 330 EGLTAIISVKVQEPQFEGQTKTKLGNREVSASVSQAVSEMLTDYLEEHPDDAKTIVQKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AA++AR++V++K+V+ LPGKL+DCS PE EI++VEGDSAGG+AK GR
Sbjct: 390 LAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQNPEICEIYLVEGDSAGGTAKMGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHK 410
DR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K LRYHK
Sbjct: 450 DRAFQAILPLRGKILNVEKAMTHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYHK 509
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
I+I+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + Y ++D E
Sbjct: 510 IVIMCDADIDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLVKKGAKKAYAWNDDER 569
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ + A IQR+KGLGEM +QLW+TT+NPE R L+Q+ I++ EA+ VFS LM
Sbjct: 570 MALMDQYGDGA--KIQRYKGLGEMNAIQLWDTTMNPEFRTLRQIQIDNGVEADRVFSMLM 627
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 628 GDEVPPRREFIEKNAVYANID 648
>gi|383812021|ref|ZP_09967468.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
gi|383355407|gb|EID32944.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 306 str. F0472]
Length = 657
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/567 (46%), Positives = 377/567 (66%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVYRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + GTR +FWPD +FTT + + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETQKTGTRQQFWPDPTIFTTTV-YQWDIVARRMRELAYLNAGIKITLT 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + I I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL S SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKSYADNDPQISKQIEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +I+++V P+FEGQTKT+LGN EV V Q+V E L++YLE HP+ I +K
Sbjct: 330 REGLTAVIAIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVENEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVSEYCYTEQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEKNATYANID 656
>gi|260591755|ref|ZP_05857213.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
gi|260536039|gb|EEX18656.1| DNA gyrase, B subunit [Prevotella veroralis F0319]
Length = 657
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/567 (46%), Positives = 377/567 (66%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVYRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + GTR +FWPD +FTT + + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETQKTGTRQQFWPDPTIFTTTV-YQWDIVARRMRELAYLNAGIKITLT 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + I I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL S SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKSYADNDPQISKQIEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +I+++V P+FEGQTKT+LGN EV V Q+V E L++YLE HP+ I +K
Sbjct: 330 REGLTAVIAIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ E DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVENEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVSEYCYTEQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFLDKYGNGVEDGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEKNATYANID 656
>gi|304439074|ref|ZP_07398993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372433|gb|EFM26020.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 637
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/553 (48%), Positives = 375/553 (67%), Gaps = 14/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF Y VSGGLHGVG+SVVNALS L V R+ Y Q++SRG P
Sbjct: 95 VLTILHAGGKF--KEGAYKVSGGLHGVGVSVVNALSTKLVAEVKRNKKLYRQEFSRGVPQ 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V+ +D GT I F PD ++F T ++F+ + R RE+AFLN + I
Sbjct: 153 TEL--EVVEDLKEDVTGTTIIFHPDPEIFET-VEFEFEVLEKRFREMAFLNKNVKIIFTD 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
E D ++ + + GG++ +V+++N K +H DV+ F + + +++A+Q+ +D+Y
Sbjct: 210 ERVDRQEI----FHYEGGIKSFVEYINRKKTKIHKDVIYFEELAENTQVEVAIQY-TDSY 264
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S+ +L +AN+I T +GGTH+ G +AS+TRT+N G+K +K+K+ +LSG+ VREG+T I
Sbjct: 265 SENVLTFANNINTEEGGTHLSGFRASVTRTINDYGRKYNIIKEKEENLSGDDVREGMTAI 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV++PNP+FEGQTK++LGN E R +VD V LT YLE +P V IL K+L A +A
Sbjct: 325 ISVKIPNPQFEGQTKSKLGNSETRGIVDGVVSNGLTAYLEENPKVAKIILDKALQARRAR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++ARDL R++S+L S +LPGKL DC + +EIF+VEGDSAGG+AK GRD QA
Sbjct: 385 EAARKARDLTRKRSILDSMTLPGKLKDCHESDISVNEIFLVEGDSAGGTAKDGRDSNIQA 444
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKI+NVE+ + ++EI+ +I A G G+ E F LRY KIII+TDADVD
Sbjct: 445 VLPLRGKIMNVEKARLDKILNSDEIKAMITAFGTGIDKE-FDINNLRYGKIIIMTDADVD 503
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDDAELKKVKSSFPS 479
GAHI TLLLTFF+R+ K L + G IYV PPLY V+RG++V +YCYDD EL+ +
Sbjct: 504 GAHIMTLLLTFFFRHMKPLIEHGHIYVAKPPLYGVKRGEKVIRYCYDDEELESALNELGR 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ Y I R+KGLGEM QLWETT+NP+ R+L ++ IED +A+ VFS+LMG V+ R+E
Sbjct: 564 DKNYKIARYKGLGEMNAEQLWETTMNPDSRILLRVNIEDVLDADDVFSTLMGVDVEPRRE 623
Query: 540 LI-QNAANLVNLD 551
I +NA N+D
Sbjct: 624 FIEENAKYAENID 636
>gi|255527581|ref|ZP_05394445.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|296186779|ref|ZP_06855180.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|255508714|gb|EET85090.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
gi|296048493|gb|EFG87926.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7]
Length = 637
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 279/558 (50%), Positives = 391/558 (70%), Gaps = 24/558 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE EV V R+G + Q + RGK
Sbjct: 96 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSELCEVEVKREGHIWKQAFERGKV 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V + GT+I F PD ++F + +D++T+A R+RELAFLN + I L
Sbjct: 154 KTGLEI----VGDSEGHGTKIHFKPDAEIFE-EVDYDYDTLAQRLRELAFLNRNIRINL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLN-----TDKKPLHDVVGFRKDVDGITIDLALQW 175
SD ++ + + GG++ +V +LN +K+P++ V G ++D ++++++Q+
Sbjct: 208 ---SDERIDKLEVFHYEGGIKSFVSYLNRNKQVINKEPIY-VEGNKQDC---SVEISIQY 260
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D Y++ + +AN+I T++GGTH+ G K++LTR N KK +K+ D +LSGE +RE
Sbjct: 261 -NDGYTENIFSFANNIDTVEGGTHLAGFKSALTRAFNDYAKKFGILKENDKNLSGEDIRE 319
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV++ +P+FEGQTKT+LGN EVR +VD V E ++ +L+ +P V SIL KSL
Sbjct: 320 GLTAVISVKLIDPQFEGQTKTKLGNSEVRGIVDGIVGEGVSSFLQENPQVAKSILDKSLM 379
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +A AA++AR+L R+KS+L ++SLPGKLADCSS P+E EI++VEGDSAGGSAKQGR+
Sbjct: 380 ASRAREAARKARELTRRKSILENTSLPGKLADCSSKDPKECEIYLVEGDSAGGSAKQGRN 439
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQAILPLRGKI+NVE++ + EEI+ +I A G G+ G+DF E +RY +III+T
Sbjct: 440 RRFQAILPLRGKIMNVEKQRLDKILGYEEIRAMITAFGGGI-GKDFDVEKIRYDRIIIMT 498
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFFYRY K L D+G +Y+ PPLYKV +GK+ Y Y D EL+K+
Sbjct: 499 DADVDGAHIRTLLLTFFYRYMKELVDQGHVYIAQPPLYKVAKGKKEHYAYSDKELEKLLE 558
Query: 476 SFPS-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ +IQR+KGLGEM QLW+TT+NP++R+L Q+ +EDA A+ +F+ LMG +V
Sbjct: 559 DVGGKDNNTNIQRYKGLGEMDATQLWDTTMNPDERVLLQVTVEDAMAADEIFTILMGDKV 618
Query: 535 DTRKELIQ-NAANLVNLD 551
+ R+E IQ NA ++NLD
Sbjct: 619 EPRREFIQENAKKVINLD 636
>gi|333922243|ref|YP_004495823.1| DNA gyrase subunit B [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747804|gb|AEF92911.1| DNA gyrase, B subunit [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 636
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/532 (50%), Positives = 364/532 (68%), Gaps = 18/532 (3%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE LEV + R+G YHQ YSRG PV+ L + GT++ F
Sbjct: 117 LHGVGVSVVNALSEKLEVEIKRNGNIYHQAYSRGVPVSELKI----IGKSKSTGTKVTFK 172
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F F T+A R+RELA+LN + I ++ E DP Q + F GG+ ++V
Sbjct: 173 PDPEIFEETT-FSLETLAQRLRELAYLNKGVKITIKDERKDPPVEQ--TFQFDGGIRDFV 229
Query: 145 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 200
+ LN +K+ LH V G ++ I +++ALQ+ +D Y++ +L +AN+I T+DGGTH
Sbjct: 230 KHLNRNKQVLHSKPIYVTGEKEQ---IIVEIALQY-NDTYNENILSFANNIHTVDGGTHE 285
Query: 201 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 260
G K +LTR +N G+ +K+ D +LSGE +REG T +ISV+V P+FEGQTKT+LGN
Sbjct: 286 IGFKTALTRVVNDYGRNHNLLKNNDPNLSGEDIREGATVVISVKVREPQFEGQTKTKLGN 345
Query: 261 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 320
EVR +VD + L YLE +P V I+ K+++A +A AA++AR+L R+KS L + S
Sbjct: 346 SEVRGIVDSIFADGLATYLEENPTVGKRIIEKAITAARAREAARKARELTRRKSALDTMS 405
Query: 321 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 380
LPGKLADCS P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +
Sbjct: 406 LPGKLADCSEKDPSVSELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKIL 465
Query: 381 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 440
NEEI+ +I ALG G+ G+DF RYHKIII+TDADVDGAHIRTLLLTFFYR+ + L
Sbjct: 466 ANEEIRAMITALGCGI-GQDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFYRHMRPLI 524
Query: 441 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 500
+ G +Y+ PPL++V +GK Y Y D EL+++ + + +IQR+KGLGEM P QLW
Sbjct: 525 EAGYVYIAQPPLFRVRKGKLDSYVYSDHELEELLKRVGYDNV-NIQRYKGLGEMNPEQLW 583
Query: 501 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
ETT++P+ R + Q+ +EDA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 584 ETTMDPDTRTVLQVTLEDAIEADATFSMLMGDRVEPRRDFIQENAQYVRNLD 635
>gi|336171503|ref|YP_004578641.1| DNA gyrase subunit B [Lacinutrix sp. 5H-3-7-4]
gi|334726075|gb|AEH00213.1| DNA gyrase, B subunit [Lacinutrix sp. 5H-3-7-4]
Length = 649
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/558 (45%), Positives = 373/558 (66%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALSE L TV+R+G + Q+Y RGK
Sbjct: 100 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLTATVYRNGKIWEQEYERGKS 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D++GT + F PD +FT ++++++T+A R+RELA+LN +T+ L
Sbjct: 158 LYP----VKAIGDTDKRGTIVTFKPDPTIFTQTLEYNYDTLASRMRELAYLNKGITVHLI 213
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ S E Y F GL+E++++L+ ++PL DV+ F + +G+ +++A+ + +
Sbjct: 214 DKRSKKEDGSYEGETFHSEEGLKEFIKFLDATREPLMKDVISFEGEKNGVPVEVAMVYNT 273
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I T +GGTH+ G + LT TL +S + ++G+ REGL
Sbjct: 274 -SYAENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKYADESGMLDKLKFDIAGDDFREGL 332
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+SV+V P+FEGQTKT+LGN EV V QSV E L++YLE +P+ +I+ K + A
Sbjct: 333 TAIVSVKVQEPQFEGQTKTKLGNREVSAAVSQSVSEMLSDYLEENPEDAKTIVQKVILAA 392
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+V+ LPGKL+DCS P + E+++VEGDSAGG+AKQGRDR
Sbjct: 393 QARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQDPAKCEVYLVEGDSAGGTAKQGRDRA 452
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K LRYHKI+I
Sbjct: 453 FQAILPLRGKILNVEKAMTHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYHKIVI 512
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY +++G + QY ++D E K +
Sbjct: 513 MCDADIDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLIKKGAKKQYAWNDEERKAI 572
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
F ++ IQR+KGLGEM QLW+TT+NPE R L+Q+ I++ EA+ VFS LMG
Sbjct: 573 MQEFGESS--KIQRYKGLGEMNAEQLWDTTMNPEFRTLRQIHIDNGVEADRVFSMLMGDE 630
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 631 VPPRREFIEKNAIYANID 648
>gi|395218293|ref|ZP_10401952.1| DNA gyrase subunit B [Pontibacter sp. BAB1700]
gi|394454663|gb|EJF09280.1| DNA gyrase subunit B [Pontibacter sp. BAB1700]
Length = 652
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/565 (47%), Positives = 381/565 (67%), Gaps = 27/565 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L VTV R+G + Q Y+ G P
Sbjct: 100 VVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTDLHVTVHRNGKVFEQHYNIGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D+ GT + F PD +FTT ++ ++TIA R+REL+FLN + I L
Sbjct: 158 AYP----VREIGTTDKTGTTVTFQPDASIFTTT-EYKYDTIASRLRELSFLNKGIRINLT 212
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+E + + + ++ GGL+E+V +L+ ++ L + + + +G+ +++ALQ+ +
Sbjct: 213 DLRETGEDGQPLSDSFYSEGGLKEFVAYLDETRENLIPEPIHIESEKNGVPVEIALQYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + +LTRTL + KS + I ++G+ REGL
Sbjct: 273 -SYTENIFSYVNNINTIEGGTHVGGFRRALTRTLKAYADKSGMLDKLKIDIAGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN +V VD +V E L ++LE +P +I+ K + A
Sbjct: 332 TAVISVKVQEPQFEGQTKTKLGNSDVGGAVDTAVGEMLNQFLEENPKEARTIVQKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+VL S+SLPGKLADCS PE EI++VEGDSAGGSAKQGR+R
Sbjct: 392 QARNAARKAREMVQRKNVLSSTSLPGKLADCSDNNPENCEIYLVEGDSAGGSAKQGRNRM 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG---VKGED-FKKEALRYHKIII 413
FQAILPLRGKILNVE+ E +Y+NEEI+N+I ALG+ +GE E LRYH+III
Sbjct: 452 FQAILPLRGKILNVEKAQEHRIYENEEIKNMITALGVSFGTAEGEKALNMEKLRYHRIII 511
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD------ 467
+TDADVDG+HIRTL+LTFF+RY K L + G IY+ +PPLY V++GK+ +YC+ +
Sbjct: 512 MTDADVDGSHIRTLILTFFFRYMKELIENGYIYIALPPLYLVKKGKEERYCWSEQDRIDA 571
Query: 468 -AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 526
AEL K K +QR+KGLGEM P QLW TT++PE R LK++ IE AAEA+ +F
Sbjct: 572 IAELGKGKEDS-----VGVQRYKGLGEMNPEQLWNTTMDPETRSLKRVTIESAAEADHLF 626
Query: 527 SSLMGARVDTRKELIQNAANLVNLD 551
S LMG V R++ I+ A +D
Sbjct: 627 SMLMGDEVGPRRDFIERNAKYARVD 651
>gi|110598305|ref|ZP_01386580.1| DNA gyrase, B subunit [Chlorobium ferrooxidans DSM 13031]
gi|110340113|gb|EAT58613.1| DNA gyrase, B subunit [Chlorobium ferrooxidans DSM 13031]
Length = 649
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/557 (48%), Positives = 372/557 (66%), Gaps = 26/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG Y Q++ RG P
Sbjct: 105 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGNVYFQRFERGIP 162
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D++GT+ F PD Q+F T +F + I R+RELAFLN +L+I ++
Sbjct: 163 ----QGDVRVIGKTDKKGTKTTFMPDHQIFKTT-EFRKDIIIDRMRELAFLNKELSITVQ 217
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQW 175
+ E + + GG++E+VQ+ +N K+P++ + G R D +++ALQ+
Sbjct: 218 DTEGIDEI-----FHYVGGIKEFVQFTDQNRINLLKEPIY-LYGER---DSTIVEIALQY 268
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D+Y + + Y N+I T +GGTH+ G + +LTRTLN+ +K+ +K+ +SL+G+ +E
Sbjct: 269 -NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNAYAQKNDLLKNLKLSLTGDDFKE 327
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+V P+FEGQTKT+LGN E + +V+ V E L E+ E +P+VL I+ K
Sbjct: 328 GLTAVISVKVAEPQFEGQTKTKLGNSETQSIVETIVNEQLAEFAESNPNVLKMIIEKVKG 387
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGRD
Sbjct: 388 AAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRD 447
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+T
Sbjct: 448 RSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSTEKLRYGKIIIMT 507
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFF+R+ ++L + G +++ PPLY V+ GK+ QY +DD E +
Sbjct: 508 DADVDGAHIRTLLLTFFFRHMRSLIEAGRVFIAQPPLYLVKSGKEQQYAWDDDERNSITE 567
Query: 476 SF----PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
S A IQR+KGLGEM P QLW TT++P R L + +E+A EA+ VFS+LMG
Sbjct: 568 SMKKMQKGKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLLVNVENAMEADQVFSTLMG 627
Query: 532 ARVDTRKELIQNAANLV 548
+V+ R+E I+ A V
Sbjct: 628 DKVEPRREFIEKNARYV 644
>gi|429765449|ref|ZP_19297743.1| DNA gyrase, B subunit [Clostridium celatum DSM 1785]
gi|429186362|gb|EKY27309.1| DNA gyrase, B subunit [Clostridium celatum DSM 1785]
Length = 638
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 386/554 (69%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE EVTV R+G + QKYSRG
Sbjct: 96 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEYCEVTVTREGYVWQQKYSRG-- 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ C + + D GT++ F PD ++F T +F+ ++ R+RELAFLN + I L
Sbjct: 152 --NVLCDLTKIGEDDGHGTKVVFKPDHEIFETT-EFEFEILSSRLRELAFLNKGICITLE 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
+ E+ + +Y + GG++E+V +LN +K+ LH+ + + DGI ++ALQ+ +D
Sbjct: 209 DKRE--EEEKIEKYHYEGGIKEFVSYLNRNKEVLHESPIYVEGEKDGIIAEIALQY-NDG 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N K+ +K+ D +LSG+ REGLT
Sbjct: 266 YNENLYSFANNIDTIEGGTHLAGFKSALTRAINDYAKRFGHIKENDKNLSGDDAREGLTA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ P+FEGQTKT+LGN EVR VVD V E ++ +LE +P V I+ K+L A +A
Sbjct: 326 VISVKISEPQFEGQTKTKLGNSEVRGVVDSIVAEGVSIFLEENPAVGKIIIDKALMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R KSVL S+LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDR+FQ
Sbjct: 386 RDAARKARELTR-KSVLERSTLPGKLADCSSKDPAECEIYIVEGDSAGGSAKQGRDRKFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE++ + ++ I+++I A G G+ G+DF +E LRY++III+TDADV
Sbjct: 445 AILPLRGKILNVEKQRLDRILNSDTIRSMITAFGAGI-GKDFDEEKLRYNRIIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D G +Y+ PPLYKV +GK+ Y Y D EL + F
Sbjct: 504 DGAHIRTLLLTFFYRYMRPLIDGGHVYIAQPPLYKVSKGKKESYAYTDEELDSILEEFGG 563
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM QLW+TT++PE R+LK+ + DA A+ +F+ LMG +V+ R+
Sbjct: 564 KDNSTNIQRYKGLGEMNATQLWDTTMDPEHRILKKASVSDAIAADEIFTILMGDKVEPRR 623
Query: 539 ELIQ-NAANLVNLD 551
E IQ NA+ + NLD
Sbjct: 624 EFIQKNASKISNLD 637
>gi|404369616|ref|ZP_10974950.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
gi|226914440|gb|EEH99641.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA]
Length = 637
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/555 (50%), Positives = 392/555 (70%), Gaps = 18/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE EVTV R+G + QKYSRG
Sbjct: 96 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWCEVTVSREGDIWQQKYSRGNA 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L+ + + GT++ F PD ++F ++D + +A R+RELAFLN + I L
Sbjct: 154 VTDLS----KIGKTEEHGTKVSFKPDTEIFEET-EYDFDILANRLRELAFLNKGIKIIL- 207
Query: 121 KEDSDP-EKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
SD E+ + Y + GG++E+V +L+ +K+ LH D + + DGI ++++LQ+ +D
Sbjct: 208 ---SDAREEGKTEVYHYEGGIKEFVSYLSRNKEVLHQDPIYIEGEKDGIIVEISLQY-ND 263
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++ + +AN+I TI+GGTH+ G K +LTR +N GKK +K+ D +LSG+ +REGLT
Sbjct: 264 SYTENLYSFANNIDTIEGGTHLSGFKTALTRVINDYGKKFNHLKENDKNLSGDDIREGLT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
++SV++ P+FEGQTKT+LGN EVR VVD V E ++ +LE +P + I+ K+L A +
Sbjct: 324 AVVSVKISEPQFEGQTKTKLGNSEVRGVVDSIVGEGVSIFLEENPGIGKIIIDKALMAAR 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR+L R KSVL SSLPGKLADCSS P E EI+IVEGDSAGGSAKQGR+RRF
Sbjct: 384 ARDAARKARELTR-KSVLERSSLPGKLADCSSKDPLECEIYIVEGDSAGGSAKQGRNRRF 442
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE++ + + I++++ A G G+ G+DF +E LRY++III+TDAD
Sbjct: 443 QAILPLRGKILNVEKQRLDRILTADSIKSMVTAFGAGI-GDDFDEEKLRYNRIIIMTDAD 501
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFF+RY + L D G +Y+ PPLY+V++ K+ Y Y DAEL+K+ S
Sbjct: 502 VDGAHIRTLLLTFFFRYMRGLLDGGHVYIAQPPLYQVKKNKKEYYAYSDAELEKLLSEIG 561
Query: 479 S-NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ +IQR+KGLGEM QLW+TT++PE+R+L + +EDA A+ +F+ LMG +V+ R
Sbjct: 562 GKDNSTNIQRYKGLGEMNANQLWDTTMDPEKRVLLKATVEDAIAADEIFTILMGDKVEPR 621
Query: 538 KELIQ-NAANLVNLD 551
+E IQ NA + NLD
Sbjct: 622 REFIQKNAKKVSNLD 636
>gi|157363918|ref|YP_001470685.1| DNA gyrase subunit B [Thermotoga lettingae TMO]
gi|157314522|gb|ABV33621.1| DNA gyrase, B subunit [Thermotoga lettingae TMO]
Length = 630
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/559 (47%), Positives = 366/559 (65%), Gaps = 23/559 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S + Y VSGGLHGVG SVVNALSE LEV + ++G Y+QKYSRG P
Sbjct: 91 VVMTTLHAGGKF--SKNIYKVSGGLHGVGASVVNALSEILEVWIHKEGKIYYQKYSRGFP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
C V + D+QGT +RF PD Q+F+ ++FD + I ++RELAFLNP++ I
Sbjct: 149 ----QCEVTVIGETDKQGTIVRFKPDDQIFSI-LKFDPDLIENKLRELAFLNPQVKIIF- 202
Query: 121 KEDSDPEKNQYNEY----FFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWC 176
++ NEY + GGL EY ++L + +KP+H+ + ++D I + +A+ +
Sbjct: 203 -------EDLANEYTVTMHYEGGLREYARYLASGRKPIHETIEVSGELDEIIVKIAIMYT 255
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ + YAN+IRTID GTH+ K + T+ LN + +K KD S SGE VREG
Sbjct: 256 DSYEEEKIYSYANNIRTIDHGTHVTAFKNTFTKMLNEYARSLGILK-KDESFSGEDVREG 314
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
L I++V + PEFEGQTK++LG+ V + ++E L+EY E++ VL IL K L
Sbjct: 315 LIAIVTVLMKEPEFEGQTKSKLGSESAGIAVSRILKEKLSEYFEVNKQVLKVILEKVLKT 374
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
++A AA++AR+L R+K+ + + SLPGKLADC S+ E SE+FIVEGDSAGGSAKQ RDR
Sbjct: 375 MRAREAARKARELARRKNAMENLSLPGKLADCVSSNVENSELFIVEGDSAGGSAKQARDR 434
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+QAILPLRGKILNVE+ + NE+I+++I A+G G+ G+ F LRY KIII+TD
Sbjct: 435 EYQAILPLRGKILNVEKSSMQKLLANEQIKDIIVAVGTGI-GDSFDSSKLRYGKIIIMTD 493
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
AD+DGAHIRTLLLTFF+RY K L ++G IY+ VPPLYKV Y Y + + + ++
Sbjct: 494 ADIDGAHIRTLLLTFFFRYMKPLIEDGRIYIAVPPLYKVSFSSNSVYVYTEEDFQALRRE 553
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QR+KGLGEM P QLWETT+NPE R L Q+ IE+A EA+ +F LMG
Sbjct: 554 LGEERKLEVQRYKGLGEMNPEQLWETTMNPETRKLIQVNIENAEEADALFEILMGESPSE 613
Query: 537 RKELIQNAANLVNLDHLDI 555
R+ I+ A + + +LD+
Sbjct: 614 RRRFIERHA--LKVTYLDV 630
>gi|448309739|ref|ZP_21499594.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
gi|445589405|gb|ELY43638.1| DNA gyrase subunit B [Natronorubrum bangense JCM 10635]
Length = 640
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/548 (48%), Positives = 369/548 (67%), Gaps = 12/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLEVEVKRDGGVFEHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V +D + GT IRFWPD +F F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMDPDEGTGTAIRFWPDTDIFE-GDDFAFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 KE-DSD-PEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E D D P K Y + GG+ E+V++LN + +H D++ F D I +++A+Q +
Sbjct: 210 DERDEDGPAKETYE---YQGGIREFVEYLNETRSAMHEDIIYFEDDDQNIEVEVAMQ-AT 265
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 266 EELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYAGENDLLNDLDENLKGEDIREGL 325
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++ A
Sbjct: 326 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIITKAVEAA 385
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++A +L R+KS L S+SLPGKLADC + PE++E+FI EGDSAGGSAKQ R+
Sbjct: 386 KARKAAQKAEELTRRKSALDSTSLPGKLADCQTKDPEKAELFIAEGDSAGGSAKQARNPE 445
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII+ TDA
Sbjct: 446 FQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVDDVRYKKIIMATDA 504
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + DAE ++
Sbjct: 505 DVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAERDEIVEEK 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 565 CDGNPTQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLMGDAVEPR 624
Query: 538 KELIQNAA 545
K+ I+ A
Sbjct: 625 KQFIKEHA 632
>gi|399574434|ref|ZP_10768193.1| DNA gyrase, B subunit [Halogranum salarium B-1]
gi|399240266|gb|EJN61191.1| DNA gyrase, B subunit [Halogranum salarium B-1]
Length = 618
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 276/549 (50%), Positives = 373/549 (67%), Gaps = 10/549 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS +LEV V RDG + ++ RG+P
Sbjct: 68 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTTLEVEVKRDGSVWTHRFERGEP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + GT+IRFWPD +F +++++T+A R+RELAFLN + I L
Sbjct: 126 QVDAFEEVREMRPDEETGTKIRFWPDDDIFEET-EYNYSTLANRLRELAFLNSGVEITLT 184
Query: 121 KE-DSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCS 177
E D+D +E F + GG++E+V++LN K PLH DVV F + D I +++A+Q +
Sbjct: 185 DERDTDDAGEPVSEIFRYDGGIKEFVEYLNETKTPLHADVVYFEDEQDNIQVEVAMQ-AT 243
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D ++ +AN+I T +GGTH+ G K +LTR +N + + D D +L GE VREGL
Sbjct: 244 DELQGSIHSFANNINTREGGTHLTGFKTALTRVVNDYASSNDMLTDLDNNLKGEDVREGL 303
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+ P+P+FEGQTKT+LGN EVR +V+ +V L Y E +P S++ K++ A
Sbjct: 304 TAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAVHNGLKTYFEENPATAQSVIMKAVEAA 363
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AAK+A +L R+KS L SSSLPGKLADC + PEE+E+FIVEGDSAGGSAKQGRDR+
Sbjct: 364 KARQAAKKAEELTRRKSALESSSLPGKLADCQTRKPEEAELFIVEGDSAGGSAKQGRDRK 423
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +N E++ LI A+G G+ GE+F E RY KII++TDA
Sbjct: 424 NQAILPLKGKILNVEKNRLDRVLENNEVRALITAIGAGI-GEEFDIEKTRYQKIIMMTDA 482
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELKKVKSS 476
DVDGAHIRTLLLT YR+ K L + G +Y PPLY+V RG+ + + ++
Sbjct: 483 DVDGAHIRTLLLTLLYRHMKPLIEAGYVYAAQPPLYRVRYRGETYDAMTEAERERIIEEK 542
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
N +QRFKGLGEM P QLWETT++PE R+LKQ+ IEDAA A+ +F+ LMG V+
Sbjct: 543 CNGNPT-QVQRFKGLGEMNPEQLWETTMDPENRILKQITIEDAAAADRMFNVLMGDAVEP 601
Query: 537 RKELIQNAA 545
RK+ I++ A
Sbjct: 602 RKQFIKDHA 610
>gi|256419449|ref|YP_003120102.1| DNA gyrase subunit B [Chitinophaga pinensis DSM 2588]
gi|256034357|gb|ACU57901.1| DNA gyrase, B subunit [Chitinophaga pinensis DSM 2588]
Length = 659
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/564 (46%), Positives = 370/564 (65%), Gaps = 21/564 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+S VNALS+ L VTV R+G + Q+Y RG P
Sbjct: 103 VVMTVLHAGGKFDKNT--YKVSGGLHGVGVSCVNALSDKLHVTVRREGKLFEQEYQRGVP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D GT + F PD ++F I ++ +AGR+RELA+LN K+ I L
Sbjct: 161 ----QYAVREIGTSDSTGTTVHFKPDNEIFKETI-YNREILAGRLRELAYLNRKIKITLT 215
Query: 121 KE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKK-----PLHDVVGFRKDVDGITIDLAL 173
+ + D N E F++ GG+ E+VQ L+ + + P + + +++A+
Sbjct: 216 DDREKDEAGNSVTETFYSEGGIIEFVQMLDRNGRRNGLLPDPIFIEAHDASSNVAVEVAV 275
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ +D++S+ + Y N+I TI+GGTH+ G + ++TR S G K+K + I ++G+
Sbjct: 276 IY-NDSFSENIFSYVNNINTIEGGTHVAGFRRAITRIFKSYGDKNKMFEKTKIEVTGDDF 334
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGL+ IISV+VP P+FEGQTKT+LGN +V VVD SV L YLE HP I++K
Sbjct: 335 REGLSAIISVKVPEPQFEGQTKTKLGNSDVMGVVDSSVAAVLDAYLEEHPREAKIIINKV 394
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A +A AA++AR +V++KSVL S LPGKLADCS PE+ E+++VEGDSAGG+AKQG
Sbjct: 395 VLAAQAREAARKARQMVQRKSVLSGSGLPGKLADCSENDPEKCELYLVEGDSAGGTAKQG 454
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYH 409
R+R FQAILPLRGKILNVE+ E +Y+NEEI+N+ ALG+ + E+ K LRYH
Sbjct: 455 RNRSFQAILPLRGKILNVEKAMEHKIYENEEIKNIFTALGVTIGTEEDDKALNLSKLRYH 514
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
K+II+TDADVDG+HI TL+LTF +RY K + ++G +Y+ PPLY V++ K+ Y + + +
Sbjct: 515 KLIIMTDADVDGSHIATLILTFIFRYMKAMVEQGYVYIAQPPLYLVKKSKEQIYAWTEED 574
Query: 470 LKKVKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
K + S IQR+KGLGEM QLWETT+NP+ R LKQ+ IE AAEA+ VFS
Sbjct: 575 RKAAIAKIAGGKEDSVTIQRYKGLGEMNAEQLWETTMNPDNRTLKQVTIESAAEADRVFS 634
Query: 528 SLMGARVDTRKELIQNAANLVNLD 551
LMG V R+E I++ A +D
Sbjct: 635 MLMGDEVPPRREFIESHAKYAKID 658
>gi|83816748|ref|YP_446507.1| DNA gyrase subunit B [Salinibacter ruber DSM 13855]
gi|83758142|gb|ABC46255.1| DNA gyrase, B subunit [Salinibacter ruber DSM 13855]
Length = 652
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/558 (46%), Positives = 375/558 (67%), Gaps = 15/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+SVVNAL+ EVTVWRDG + Q Y G P
Sbjct: 102 VVMTVLHAGGKFDKDS--YQVSGGLHGVGVSVVNALASRFEVTVWRDGSVWEQNYLCGVP 159
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ V P+++ + GTRIRFWPD +F T +F T++ R+RELAFLN + I +
Sbjct: 160 EDPVR-RVRPMEAGEETGTRIRFWPDGDIFKTT-EFRFETLSDRLRELAFLNAGVRIRVE 217
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWC 176
R+ED + Y+ G+ +V +L+ + + D + + DG + ++LA+Q+
Sbjct: 218 DHREEDKGLARETYHS---EEGIIGFVDYLDEARDSILDETIYIAETDGEVPVELAMQY- 273
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y+ +L + N+I T +GGTH+ G + +LTRTL +K+ + D LSG+ REG
Sbjct: 274 NDEYNKNVLSFVNNINTHEGGTHVTGFRRALTRTLKRYAQKNDMLSDLKFDLSGDDFREG 333
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+V P+FEGQTKT+LGN +V+ +V+ + L +LE HPD + I+ K + A
Sbjct: 334 LTAVLSVKVSEPQFEGQTKTKLGNSDVQGIVESLINTELGRWLEDHPDQAERIIEKVIQA 393
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+LV++K SLPGKLADCSS PEE E+++VEGDSAGGSAKQ RDR
Sbjct: 394 AEARAAARKARELVQRKDAFSGGSLPGKLADCSSRDPEEGELYLVEGDSAGGSAKQARDR 453
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG--EDFKKEALRYHKIIIL 414
FQAILPLRGKILNVE+ + ++++IQN++ ALG G+ E+F +RYHKI+++
Sbjct: 454 HFQAILPLRGKILNVEKARLDRILEHDQIQNIVTALGTGLTSTEEEFNMNEMRYHKIVMM 513
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIR+LLLTFFYR + L ++G IY+ +PPLY+++ G Q YC+ D E++
Sbjct: 514 TDADVDGAHIRSLLLTFFYRQLRPLIEKGNIYIALPPLYRIQNGSQEIYCWSDEEMQTRM 573
Query: 475 SSFPSNALY-SIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ ++ S+QR+KGLGEM P QLW TT+NPE R ++Q+ I+DAA A+ +FS+LMG
Sbjct: 574 AELRADGNSPSMQRYKGLGEMNPEQLWTTTMNPETRKIQQVTIQDAAAADRLFSTLMGDS 633
Query: 534 VDTRKELIQNAANLVNLD 551
V+ R+E I+ A +D
Sbjct: 634 VEPRREFIERNAKYATID 651
>gi|315917788|ref|ZP_07914028.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
gi|317059526|ref|ZP_07924011.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313685202|gb|EFS22037.1| DNA gyrase subunit B [Fusobacterium sp. 3_1_5R]
gi|313691663|gb|EFS28498.1| DNA gyrase subunit B [Fusobacterium gonidiaformans ATCC 25563]
Length = 638
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 368/554 (66%), Gaps = 10/554 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE E+ V RDG Y+QKY RGKP
Sbjct: 91 IVLTVLHAGGKF--ENDNYKVSGGLHGVGISVVNALSEWTEIKVKRDGNVYYQKYLRGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + +++ D GT + F PD ++F T I F++ + R++ELA+LN L I L
Sbjct: 149 IEDVKI-ISSLEAGDTTGTTVTFKPDAEIFETVI-FEYEVLQHRLKELAYLNRGLEINLL 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D E + ++ F GG+ ++++ + + + L + + + +D+A + + +
Sbjct: 207 --DCRNEIGKKEKFQFEGGISDFLKEVTHENQVLLSKQIHVEGQAEQVGVDIAFTYTT-S 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
S+T+ + N+I T +GGTH+ G + LT+ +N +GK +K+KD L G +REG+
Sbjct: 264 QSETIYSFVNNINTTEGGTHVTGFRTCLTKVINDIGKSQGFLKEKDGKLQGGDIREGIVA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+VP P+FEGQTKT+LGN EV +V+ + L +LE +P+ I+ K L++ KA
Sbjct: 324 IISVKVPQPQFEGQTKTKLGNSEVSGIVNSVLSVDLKIFLEDNPNDTKLIIEKILNSKKA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+ V +KSVL SLPGKLADCSS EE EIF+VEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAAQRAREAVLRKSVLEVGSLPGKLADCSSKKSEECEIFLVEGDSAGGSAKQGRDRYFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ ++EEI+ ++ A G + E F LRY KII++TDADV
Sbjct: 444 AILPLKGKILNVEKAGLHKALESEEIRAMVTAFGTNIGEESFDLNKLRYGKIILMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTF YRY L G +Y+ PPLYK+ GK ++Y Y DA+LK++ S
Sbjct: 504 DGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKISFGKSIRYAYTDAQLKEILQSVEG 563
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y++QR+KGLGEM P QLWETT++PE R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 564 ENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVSIDNAREADMLFDKLMGDKVEPRR 623
Query: 539 ELIQNAANLV-NLD 551
E IQ A N+D
Sbjct: 624 EFIQEHAEYAKNID 637
>gi|323487683|ref|ZP_08092941.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2]
gi|323398417|gb|EGA91205.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2]
Length = 642
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/553 (49%), Positives = 365/553 (66%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE+ EV V RD ++ K+ RG
Sbjct: 99 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSETTEVYVNRDEKRHYIKFERGAV 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT IRF D ++F ++ + + R+RELA+LN L I ++
Sbjct: 157 TEELNV----IGDSDHTGTTIRFKADAEIFKETTVYEFDILDHRLRELAYLNRGLKIVVK 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
E EK + Y F GG++ YV+ LN K PLH+ F + DGIT+++A+Q+ +
Sbjct: 213 DEREGEEKEKI--YHFEGGIKSYVEHLNKSKDPLHEEAIFVEAERDGITVEVAMQYNA-G 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N G+K +K++D++L+G+ VREGLT
Sbjct: 270 YAANIFSFANNINTHEGGTHESGFKTALTRVVNDYGRKKSMLKEQDLNLTGDDVREGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P+FEGQTKT+LGN EV +V+ +L +P V I+ K + A A
Sbjct: 330 IISVKHPDPQFEGQTKTKLGNTEVSTIVNNLFSNGFERFLLENPAVSKKIVEKGIMASHA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+ R+KSVL SSLPGKLADCSS P+ SEI+IVEGDSAGGSAK GRDR FQ
Sbjct: 390 RMAAKKAREFTRRKSVLEVSSLPGKLADCSSRDPKISEIYIVEGDSAGGSAKSGRDRHFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N+EI+N+I ALG G+ GE+F E RYHKI+I+TDADV
Sbjct: 450 AILPLRGKILNVEKARLDRILTNDEIRNIITALGTGI-GEEFNLEKARYHKIVIMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF +RY + L + G IY+ PPL+++++GK V+Y Y DA+LK +
Sbjct: 509 DGAHIRTLLLTFLFRYMRPLLEAGYIYIAQPPLFQIKQGKHVEYVYTDAQLKTALENLSP 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+IQR+KGLGEM QLW+TT++P+ R L Q+ + DA A+ F LMG V+ R+
Sbjct: 569 TPKPNIQRYKGLGEMNATQLWDTTMDPDVRTLLQVTLNDAMVADETFHILMGDEVEPRRN 628
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 FIEENAKYVKNLD 641
>gi|414082107|ref|YP_006990804.1| DNA gyrase subunit B [Carnobacterium maltaromaticum LMA28]
gi|412995680|emb|CCO09489.1| DNA gyrase, B subunit [Carnobacterium maltaromaticum LMA28]
Length = 645
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/529 (48%), Positives = 353/529 (66%), Gaps = 10/529 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS LEV V +DG ++QK+ +GK L + DRQGT + F
Sbjct: 124 LHGVGSSVVNALSTILEVMVHKDGKIHYQKFHQGKVGEDLKI----IGDTDRQGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT F+ ++ R+RELAFLN L I++ ED + E+ + GG++ YV
Sbjct: 180 PDPEIFTETTVFEFEKLSTRVRELAFLNKGLKISI--EDKREGQETLKEFHYEGGIKSYV 237
Query: 145 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K L D + + GI ++ A+Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNHNKTVLFEDPIYIEGEQQGIVVEAAMQY-TDGYHTNLLSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ + +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN E
Sbjct: 297 KTALTRVINDYARKSKLMKENEENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEA 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R + D+ + ++L +P V ++ K + A KA LAAKRAR++ R+KS L S+LPG
Sbjct: 357 RTITDRLFSAHFDKFLMENPQVARRVIEKGILASKARLAAKRAREVTRKKSGLEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS P SEIFIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSKDPSISEIFIVEGDSAGGSAKQGRSRLFQAILPIRGKILNVEKATLDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGFGG-DFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLY+V +GK++ Y DAEL+ + P+ IQR+KGLGEM QLW TT
Sbjct: 536 YVYIAQPPLYQVRQGKKMVYLDSDAELEAYLNEIPAQPKPVIQRYKGLGEMDAEQLWSTT 595
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
++PE+R + Q+ ++DA EA+ VF LMG RV+ R++ I +NA + NLD
Sbjct: 596 MDPERRRMLQVTVDDAIEADQVFEMLMGDRVEPRRKFIEENAVYVQNLD 644
>gi|448302921|ref|ZP_21492871.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
gi|445593928|gb|ELY48095.1| DNA gyrase subunit B [Natronorubrum sulfidifaciens JCM 14089]
Length = 640
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/546 (48%), Positives = 370/546 (67%), Gaps = 8/546 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLEVEVKRDGGVFEHAFESGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V +D + GT IRFWPD +F T F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMDPDEGTGTTIRFWPDIDIFETG-DFTFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E ++ + Y + GG+ E+V++LN + +H DV+ F D I +++A+Q ++
Sbjct: 210 DERAEDGPTEET-YEYEGGIREFVEYLNETRSAMHEDVIYFEDDDQNIEVEVAMQ-ATEE 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GG+H+ G K +LTRT+N ++ + D + +L GE +REGLT
Sbjct: 268 LQGSIHAFANNINTREGGSHLTGFKTALTRTVNDYAGENDLLGDLEENLKGEDIREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++ A KA
Sbjct: 328 VISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIITKAVEAAKA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A +L R+KS L S+SLPGKLADC + PE++E+FI EGDSAGGSAKQ R+ FQ
Sbjct: 388 RKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEKAELFIAEGDSAGGSAKQARNPEFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDADV
Sbjct: 448 AVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMATDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y PPLY+V + +AE ++
Sbjct: 507 DGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTEAERDEIIEQKCD 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LMG V+ RK+
Sbjct: 567 GNPTRVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLMGDAVEPRKQ 626
Query: 540 LIQNAA 545
I+ A
Sbjct: 627 FIKEHA 632
>gi|387132329|ref|YP_006298301.1| DNA gyrase subunit B [Prevotella intermedia 17]
gi|386375177|gb|AFJ09678.1| DNA gyrase, B subunit [Prevotella intermedia 17]
Length = 656
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/566 (46%), Positives = 372/566 (65%), Gaps = 23/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMMSQVFRNGKIYQQEYEQGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD +FTT + F + +A R+RELAFLN + I L
Sbjct: 156 LYPVKI----VGDTDKTGTRQQFWPDASIFTTTV-FQWDIVARRMRELAFLNAGIKITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAVMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
Y++ + Y N+I TI+GGTH+ G +A+LTRTL S +K ++ I ++GE R
Sbjct: 271 -YNENIHSYVNNINTIEGGTHLTGFRAALTRTLKSYADNEPQIAKQIEKAKIEITGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPAEAKLICDKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P+E EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GE DF+ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVDGESDFEANTDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTYKKVSEYCYTEQQ 569
Query: 470 ----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
L+K N QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+A+ A+ +
Sbjct: 570 RLQFLEKYAGGDEENKAVHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENASTADEM 629
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 630 FSMLMGDDVEPRREFIEQNATYANID 655
>gi|284165545|ref|YP_003403824.1| DNA gyrase B subunit [Haloterrigena turkmenica DSM 5511]
gi|284015200|gb|ADB61151.1| DNA gyrase, B subunit [Haloterrigena turkmenica DSM 5511]
Length = 644
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/549 (47%), Positives = 372/549 (67%), Gaps = 10/549 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGSVFRHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT+IRFWPD +F + +F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEETGTQIRFWPDTGIFESG-EFSFSTLSNRLRELAFLNSGVHITLR 209
Query: 121 KEDSDPEKNQ---YNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWC 176
E + + Y + GG+ E+V++LN + +HD V+ F + I +++A+Q
Sbjct: 210 DEREEATEGDDLVEETYEYQGGIREFVEYLNETRSAMHDDVIYFEAEEQNIQVEVAMQ-A 268
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
++ ++ +AN+I T +GGTH+ G K +LTRT+N K + + D + +L GE +REG
Sbjct: 269 TEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAKDNDMLGDLEDNLKGEDIREG 328
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+ P+P+FEGQTKT+LGN EVR +V+ S+ E L Y E HPD +I++K++ A
Sbjct: 329 LTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESSMHEGLGTYFEEHPDTAQAIVTKAVEA 388
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNP 448
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TD
Sbjct: 449 DFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMATD 507
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE ++ +
Sbjct: 508 ADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDEIVAE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LMG V+
Sbjct: 568 KCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLMGDAVEP 627
Query: 537 RKELIQNAA 545
RK+ I++ A
Sbjct: 628 RKQFIKDNA 636
>gi|149182285|ref|ZP_01860764.1| DNA gyrase subunit B [Bacillus sp. SG-1]
gi|148849977|gb|EDL64148.1| DNA gyrase subunit B [Bacillus sp. SG-1]
Length = 638
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/553 (49%), Positives = 376/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG ++QK+ +G P
Sbjct: 96 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTELEVFVHRDGKIHYQKFEKGVP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L D GT I F PD ++FT +++++ +A R+RELAFLN + I +
Sbjct: 154 SGDLKV----TGESDVTGTIIHFKPDPEIFTETTEYEYDILANRLRELAFLNRGIKIII- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
ED+ E ++ NEY + GG++ YV+ LN K+ +H+ + + D I++++ALQ+ +D
Sbjct: 209 -EDNRVE-DKKNEYHYEGGIKSYVEHLNRSKEVVHEEPIYIEGEKDNISVEIALQY-NDG 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +LSGE VREG+T
Sbjct: 266 FASNLYSFANNIHTYEGGTHESGFKTALTRVINDYARKNHLYKESDANLSGEDVREGITA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN E R + D E+ +L +P V ++ K L A +A
Sbjct: 326 IISIKHPDPQFEGQTKTKLGNSEARTITDALFSEHFESFLLENPVVARKVVDKGLMAARA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK+AR+L R+KS L SSLPGKLADCSS P+ SEI+IVEGDSAGGSAKQGRDR FQ
Sbjct: 386 RLAAKKARELTRRKSALEVSSLPGKLADCSSRDPKISEIYIVEGDSAGGSAKQGRDRHFQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N E++ +I ALG G+ GEDF RY K++I+TDADV
Sbjct: 446 AILPLRGKIINVEKARLDKILSNNEVRAMITALGTGI-GEDFDISKARYQKVVIMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + + + G IY+ PPLY++++GK+++Y Y D +L++ + P+
Sbjct: 505 DGAHIRTLLLTFFYRYMRQIIEAGYIYIAQPPLYQIKQGKKIEYVYSDKQLEEALAQMPA 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQR+KGLGEM QLWETT++PE R L Q+ +EDA EA+ F LMG +V+ R+
Sbjct: 565 QPKPGIQRYKGLGEMNATQLWETTMDPEYRTLLQVSLEDAIEADETFEMLMGDKVEPRRN 624
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 625 FIEDNAAYVKNLD 637
>gi|383625257|ref|ZP_09949663.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|448700123|ref|ZP_21699344.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
gi|445780025|gb|EMA30936.1| DNA gyrase subunit B [Halobiforma lacisalsi AJ5]
Length = 644
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/549 (47%), Positives = 373/549 (67%), Gaps = 10/549 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG Y + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGGVYRHAFEAGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++S + GT IRFWPD+ +F A F +T++ R+RELAFLN + I+LR
Sbjct: 152 VGDME-RVRDMESDEETGTEIRFWPDESIFE-ADDFSFSTLSNRLRELAFLNSGVRISLR 209
Query: 121 ---KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWC 176
+E +D E Y + GG+ E+V++LN + +H+ V+ F + I +++A+Q
Sbjct: 210 DEREEAADAEGIIEETYEYEGGIREFVEYLNETRSAMHEEVIYFEDEAQNIQVEVAMQ-A 268
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
++ ++ +AN+I T +GGTH+ G K +LTRT+N ++ + D D +L GE +REG
Sbjct: 269 TEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYANENDLLGDLDENLKGEDIREG 328
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++S++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E +PD ++I++K++ A
Sbjct: 329 LTAVVSIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEENPDTAEAIINKAVEA 388
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + P E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPGEAELFIAEGDSAGGSAKQARNP 448
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TD
Sbjct: 449 EFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDLEDVRYEKIIMATD 507
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + E ++
Sbjct: 508 ADVDGAHIRTLLLTFFYRHMRPLLENGYVYATQPPLYRIRYRGDTYDAMTEQERDEIIEE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ + +QRFKGLGEM P QLW+TT++PE R+LKQ+ IEDAA A+ +FS LMG V+
Sbjct: 568 KCNGSPSQVQRFKGLGEMNPQQLWDTTMDPENRILKQITIEDAAAADKMFSVLMGDAVEP 627
Query: 537 RKELIQNAA 545
RK+ I+ A
Sbjct: 628 RKQFIKENA 636
>gi|78188013|ref|YP_378351.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
gi|78170212|gb|ABB27308.1| DNA gyrase subunit B [Chlorobium chlorochromatii CaD3]
Length = 637
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/557 (48%), Positives = 369/557 (66%), Gaps = 26/557 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TV+ AGGKF Y VSGGLHGVG SVVNALSE EV V+RDG Y+Q+Y RG P
Sbjct: 93 LVMTVIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYRDGKAYYQRYERGVP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + D++GT+ F PD +F T +F I R+RELAFLN L I ++
Sbjct: 151 ----QGDVKVIGDSDQRGTKTTFMPDGTIFKTT-EFRKEIIIDRMRELAFLNKNLRIIVQ 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQW-----LNTDKKPLHDVVGFRKDVDGITIDLALQW 175
+ + E E+ F GG+ E+V++ LN ++P++ + G R DG +++ALQ+
Sbjct: 206 DTNGEQE-----EFHFEGGICEFVRFTDQNRLNLLREPIY-LYGER---DGTVVEIALQY 256
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+D+Y + + Y N+I T +GGTH+ G + +LTRTLNS +K+ +K+ ++L+G+ +E
Sbjct: 257 -NDSYQENVFSYVNNINTHEGGTHVTGFRKALTRTLNSYAQKNDLLKNLKLTLTGDDFKE 315
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+V P+FEGQTKT+LGN E + +V+ V + L E+ E +P+ L I+ K
Sbjct: 316 GLTAVISVKVAEPQFEGQTKTKLGNSETQSIVETVVNDQLAEFAESNPNTLKLIIEKVKG 375
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A + AA++A++L R+KSVL SS LPGKLADCS PE E++IVEGDSAGGSAKQGRD
Sbjct: 376 AAMSREAARKAKELTRRKSVLESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRD 435
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R FQAILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+T
Sbjct: 436 RSFQAILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGDEEFAVEKLRYGKIIIMT 495
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LK 471
DADVDGAHIRTLLLTFF+R+ + + + G +Y+ PPLY V+ GK Y +DD E +
Sbjct: 496 DADVDGAHIRTLLLTFFFRHMRPVIEAGRVYIAQPPLYLVKSGKDQHYAWDDDERNSIVD 555
Query: 472 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+K S A IQR+KGLGEM P QLW TT++P R L + +E+A EA+ VFS+LMG
Sbjct: 556 NMKKMQKSKANIHIQRYKGLGEMNPEQLWSTTMDPAHRSLLLVSVENAMEADQVFSTLMG 615
Query: 532 ARVDTRKELIQNAANLV 548
+V+ R+E I+ A V
Sbjct: 616 DKVEPRREFIEKNARYV 632
>gi|397772628|ref|YP_006540174.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
gi|397681721|gb|AFO56098.1| DNA gyrase, B subunit [Natrinema sp. J7-2]
Length = 642
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/548 (47%), Positives = 372/548 (67%), Gaps = 10/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG+ + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGV-FRHAFEAGEP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT IRFWPD +F T + +T++ R+RELAFLN + I LR
Sbjct: 151 VGDME-RVRDMEPDEEPGTEIRFWPDTDIFETG-EISFSTLSNRLRELAFLNSGVRITLR 208
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+E++D Y + GG+ E+V +LN + +HD V+ F + I +++A+Q +
Sbjct: 209 DEREETDAGDPVTETYEYDGGIREFVNYLNETRSAMHDDVIYFEDEAQNIQVEVAMQ-AT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTR +N ++ + D D +L GE +REGL
Sbjct: 268 EELQGSIHAFANNINTREGGTHLTGFKTALTRCVNDYANENDLLSDLDDNLKGEDIREGL 327
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD ++I++K++ A
Sbjct: 328 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAEAIVAKAVEAA 387
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 388 KARMAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNPD 447
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TDA
Sbjct: 448 FQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIEDVRYKKIIMATDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + +AE + +
Sbjct: 507 DVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEAERDAIVAEK 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 567 CDGTPSQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFSVLMGDAVEPR 626
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 627 KQFIKDHA 634
>gi|257388769|ref|YP_003178542.1| DNA gyrase subunit beta [Halomicrobium mukohataei DSM 12286]
gi|257171076|gb|ACV48835.1| DNA gyrase, B subunit [Halomicrobium mukohataei DSM 12286]
Length = 641
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/548 (48%), Positives = 380/548 (69%), Gaps = 17/548 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ G+P
Sbjct: 94 VIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSKWLEVEVKRDGAVWKQRFDHGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V ++ + GT+IRFWPD ++F A F ++T+A R+RELAFLN + I+L
Sbjct: 152 EDELE-RVRDMEPDEETGTQIRFWPDDEIFE-ATDFVYSTLASRLRELAFLNSGVEISLV 209
Query: 121 KE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDV---DG-ITIDLALQ 174
E D D E + + GG++E+VQ+LN K+PLH DV+ F + DG + +++A+Q
Sbjct: 210 DERDGDSET-----FVYEGGIKEFVQYLNETKEPLHRDVIYFEDEEQIEDGPVQVEIAMQ 264
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
++ ++ +AN+I T +GG+H+ G K +LTRT+N + + D D +LSGE +R
Sbjct: 265 GTAELQG-SIHAFANNINTREGGSHMTGFKTALTRTVNDYATSNGLLNDLDDTLSGEDIR 323
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 324 EGLTAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLGTFFEENPDTAEAIVGKAV 383
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA AAK+A +L R+KS L S++LPGKL+DC + P+++E+F+VEGDSAGGSAKQGR
Sbjct: 384 EAAKARKAAKKAEELTRRKSALESTALPGKLSDCQTRDPDDAELFVVEGDSAGGSAKQGR 443
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQAILP+RGKILNVER + +N+ I+N+I ALG G+ G++F E +RY +II++
Sbjct: 444 NPEFQAILPIRGKILNVERHRLDRILENDSIRNVITALGTGI-GDEFDVEDIRYKRIIMM 502
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY+V + +AE ++
Sbjct: 503 TDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYAAQPPLYRVRYNGETYDAMTEAERDRLV 562
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+QRFKGLGEM P QLW+TT++P+QR+LKQ+ IEDAA A+ +FS LMG V
Sbjct: 563 EEKCGGDPDQVQRFKGLGEMNPQQLWDTTMDPDQRILKQITIEDAAAADKMFSVLMGDAV 622
Query: 535 DTRKELIQ 542
+ RKE I+
Sbjct: 623 EPRKEFIK 630
>gi|359409915|ref|ZP_09202380.1| DNA gyrase, B subunit [Clostridium sp. DL-VIII]
gi|357168799|gb|EHI96973.1| DNA gyrase, B subunit [Clostridium sp. DL-VIII]
Length = 635
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 283/554 (51%), Positives = 383/554 (69%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE VTV RDG + QKYS+GK
Sbjct: 95 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEECTVTVKRDGHIWEQKYSKGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T +T + + D GT F PD +F I FD ++ R+RELAFLN + I L
Sbjct: 153 LTEVT----QIGNSDETGTETYFKPDAGIFD-EIVFDFEVLSQRLRELAFLNKGIYIKLV 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
D EK + + + GG++ +V +LN +K PLHD + + V D I +++ALQ+ +D
Sbjct: 208 --DKRDEKEEI--FHYEGGIKSFVSYLNRNKVPLHDEPIYIEGVKDNIAVEVALQY-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+ +REGLT
Sbjct: 263 YTENIFSFANNIDTVEGGTHLVGFKTALTRVFNDYAKKFGHIKENDKNFTGDDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ P+FEGQTKT+LGN EVR +VD V E + +LE +P++ I+ K+L A +A
Sbjct: 323 VISVKIEEPQFEGQTKTKLGNSEVRGIVDSVVGENVGTFLEENPNIGKMIVDKALMAARA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R KSVL ++LPGKLADCSS P E EI+IVEGDSAGGSAKQGR+RRFQ
Sbjct: 383 RDAARKARELTR-KSVLERTTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQGRNRRFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE++ + + I+++I A G G+ G DF E +RY++III+TDADV
Sbjct: 442 AILPLRGKILNVEKQRLDRILNADTIRSMITAFGAGI-GNDFAVEKIRYNRIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D+G +Y+ PPLYKV +GK+ Y Y DAEL+ V S F
Sbjct: 501 DGAHIRTLLLTFFYRYMRELIDDGHVYIAQPPLYKVSKGKKEHYAYSDAELESVLSDFGG 560
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT++PE+R+L ++ I+DA A+ +F+ LMG +V+ RK
Sbjct: 561 KDNSTDIQRYKGLGEMNANQLWDTTMDPEKRILLKVNIDDAMAADEIFTILMGEKVEPRK 620
Query: 539 ELI-QNAANLVNLD 551
E I QNA +VNLD
Sbjct: 621 EFIQQNAKKVVNLD 634
>gi|281424989|ref|ZP_06255902.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|299142183|ref|ZP_07035316.1| DNA gyrase, B subunit [Prevotella oris C735]
gi|281400833|gb|EFB31664.1| DNA gyrase, B subunit [Prevotella oris F0302]
gi|298576272|gb|EFI48145.1| DNA gyrase, B subunit [Prevotella oris C735]
Length = 656
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/567 (46%), Positives = 376/567 (66%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V ++GTR +FWPD VFTT + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETTKRGTRQQFWPDPTVFTTTT-YKWDIVASRMRELAYLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNEEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKAYADAEPTIAKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAKKICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++KSV+ LPGKLADCS+ P+E EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKSVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCTYKKASEYCYTEQQ 569
Query: 470 L-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
K V+ +L++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I++AAEA+
Sbjct: 570 RQAFIDKYVEGKEDDKSLHT-QRYKGLGEMNPEQLWETTMDPKSRLLKQVTIQNAAEADE 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVEPRREFIEQNATYANID 655
>gi|392530709|ref|ZP_10277846.1| DNA gyrase subunit B [Carnobacterium maltaromaticum ATCC 35586]
Length = 645
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/529 (48%), Positives = 352/529 (66%), Gaps = 10/529 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS LEV V +DG ++QK+ +GK L + DRQGT + F
Sbjct: 124 LHGVGSSVVNALSTILEVMVHKDGKIHYQKFHQGKVGEDLKI----IGDTDRQGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT F+ ++ R+RELAFLN L I++ ED + E+ + GG++ YV
Sbjct: 180 PDPEIFTETTVFEFEKLSTRVRELAFLNKGLKISI--EDKREGQETLKEFHYEGGIKSYV 237
Query: 145 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN +K L D + + GI ++ A+Q+ +D Y +L +AN+I T +GGTH G
Sbjct: 238 EHLNHNKTVLFEDPIYIEGEQQGIVVEAAMQY-TDGYHTNLLSFANNIHTYEGGTHESGF 296
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +KSK +K+ + +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN E
Sbjct: 297 KTALTRVINDYARKSKLMKENEENLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEA 356
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R + D+ + ++L +P V ++ K + A KA LAAKRAR++ R+KS L S+LPG
Sbjct: 357 RTITDRLFSAHFDKFLMENPQVARRVIEKGILASKARLAAKRAREVTRKKSGLEISNLPG 416
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS P SEIFIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 417 KLADCSSKDPSISEIFIVEGDSAGGSAKQGRSRLFQAILPIRGKILNVEKATLDKILANE 476
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 477 EIRSLFTAMGTGFGG-DFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 535
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLY+V +GK++ Y DAEL+ P+ IQR+KGLGEM QLW TT
Sbjct: 536 YVYIAQPPLYQVRQGKKMVYLDSDAELEAYLKEIPAQPKPVIQRYKGLGEMDAEQLWSTT 595
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
++PE+R + Q+ ++DA EA+ VF LMG RV+ R++ I +NA + NLD
Sbjct: 596 MDPERRRMLQVTVDDAIEADQVFEMLMGDRVEPRRKFIEENAVYVQNLD 644
>gi|282163382|ref|YP_003355767.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
gi|282155696|dbj|BAI60784.1| DNA gyrase subunit B [Methanocella paludicola SANAE]
Length = 635
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/553 (47%), Positives = 376/553 (67%), Gaps = 17/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE L V V R+ + Q+Y RGKP
Sbjct: 97 IVMTMLHAGGKFDNLT--YKVSGGLHGVGVSVVNALSEWLRVEVRRNEKLWVQEYVRGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + GT F PD +F T +F + + R+RELAFLN + I L
Sbjct: 155 ----KDEVHEIGTAIGTGTTTIFKPDPTIFETT-EFKYEILVNRLRELAFLNKGVKITL- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D + + + GG+ ++VQ+LN K P+++ V+ F K D +++A+Q+ +D
Sbjct: 209 ---MDARSGVSDTFHYEGGIVQFVQYLNEGKTPVNEKVIYFEKQKDTTDVEIAMQY-NDG 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+I T +GGTH+ G +++LTR+ N KK+ +K D+ SGE +REGLT
Sbjct: 265 YSEIVLAFANNIHTTEGGTHLSGFRSALTRSFNDYAKKNSLLKG-DMQFSGEDIREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV++ NP+FEGQTKT+LGN +V+ +V+ V E L ++LE +P I+ K++ A +A
Sbjct: 324 IISVKLTNPQFEGQTKTKLGNSDVQGIVNSLVGEGLDDFLEENPSEARKIIDKAVQAFQA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+KSVL +++LPGKLADCS P + E+++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAARKARELTRRKSVLENTTLPGKLADCSERDPSKCELYLVEGDSAGGSAKQGRNRLFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + +EEI+ LI A+G V GEDF + RYHKII++TDADV
Sbjct: 444 AILPLRGKILNVEKARLDRVLTSEEIRALITAMGTSV-GEDFVIDKARYHKIILMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+RY K L + G +Y+ PPL++ ++GK+ +Y Y++ L +
Sbjct: 503 DGAHIRTLLLTFFFRYMKPLIEAGYVYIAQPPLFRAKKGKEERYAYNEEALAGILEEMGR 562
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N + ++ R+KGLGEM P QLW TT++P+ R + Q+ +EDA EA+ F+ LMG +V+ R++
Sbjct: 563 NGV-AVNRYKGLGEMNPEQLWSTTMDPQTRTVLQVTMEDAVEADRTFTLLMGDKVEPRRD 621
Query: 540 LI-QNAANLVNLD 551
I QNA + NLD
Sbjct: 622 FIVQNAKFVRNLD 634
>gi|340357105|ref|ZP_08679733.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sporosarcina
newyorkensis 2681]
gi|339618783|gb|EGQ23374.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sporosarcina
newyorkensis 2681]
Length = 640
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/553 (48%), Positives = 373/553 (67%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE EV V D Y ++SRG P
Sbjct: 97 VIMTVLHAGGKFGGGGYKVSGG--LHGVGSSVVNALSEKTEVFVRLDQKLYAIEFSRG-P 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ + + D GT IRF D ++FT ++++T+A R+RELA+LN L I +
Sbjct: 154 VSK---ELEVIGESDETGTTIRFKADPEIFTETTVYEYSTLATRLRELAYLNRGLRITIT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
E + K++ + + GG++ YVQ LN +K+P+ + + + DGI+I++A+Q+ S
Sbjct: 211 DEREEEPKSEV--FHYEGGIKSYVQHLNENKEPIFEEPIYIEGERDGISIEIAMQYNS-G 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ +L +AN+I T +GGTH G K +LTR +N +K+ +K+ D +LSG+ VREGLT
Sbjct: 268 YAENLLSFANNIHTYEGGTHESGFKTALTRVINDYARKNGLLKEADGNLSGDDVREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN EV + + E L +L +P V ++ KS A +A
Sbjct: 328 IISIKHPDPQFEGQTKTKLGNSEVSTITNSLFSEALQRFLIENPVVARKVVDKSTMAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
LAAK AR+L R+KS L SSLPGKL+DCSS P SE++IVEGDSAGGSAK GRDR FQ
Sbjct: 388 RLAAKNARELTRRKSALEVSSLPGKLSDCSSRDPSISELYIVEGDSAGGSAKNGRDRHFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I ALG G+ G +F + RYHK++I+TDADV
Sbjct: 448 AILPLRGKILNVEKARLDRILGNAEIRMIITALGTGI-GSEFDLQKARYHKLVIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+R+ + L + G +Y+ PPLY+V GK QYCYD+ L+++ S P+
Sbjct: 507 DGAHIRTLLLTFFFRFMRPLIEAGYVYIAQPPLYRVRAGKNEQYCYDEEALQEILRSMPA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ I R+KGLGEM P QLWETT++P++R Q+ +EDA EA+ F LMG V+ R++
Sbjct: 567 SPKPDITRYKGLGEMNPEQLWETTMDPDKRTFLQVRLEDAMEADATFEELMGDEVEPRRK 626
Query: 540 LIQ-NAANLVNLD 551
I+ NA + N+D
Sbjct: 627 FIEDNAVYVQNID 639
>gi|333029415|ref|ZP_08457476.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
gi|332740012|gb|EGJ70494.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011]
Length = 652
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/560 (46%), Positives = 370/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V R+G+ Y Q+Y+ GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTRMITEVSRNGITYRQEYACGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + D GT+ FWPD +FT + + ++ +A R+RELAFLN L I+L
Sbjct: 158 ----QYPVKEVGTTDDTGTKQTFWPDPTIFTVLV-YSYDILATRMRELAFLNAGLKISLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ + E Y F GL+E+V+++++ ++ L +DV+ + G+ I++A+ + +
Sbjct: 213 DKRTQNEDGTYKSESFQSKEGLKEFVRYIDSSREHLVNDVIYLNTEKQGVPIEVAIMYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++S+ + Y N+I TI+GGTH+ G + +LTRTL + +K + + +SG+ REGL
Sbjct: 273 -SFSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDNKLLDKIKVDISGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VDQ+V E L YLE HP +I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNTEVMGAVDQAVGEALNYYLEEHPREAKTIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR+LV++KS + LPGKLADCS PE E+F+VEGDSAGG+AKQGRDR
Sbjct: 392 TARHAARKARELVQRKSPMSGGGLPGKLADCSEKNPEICELFLVEGDSAGGTAKQGRDRS 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIII 413
FQAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ KEA LRYHKIII
Sbjct: 452 FQAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKEANLEKLRYHKIII 511
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL++TFF+RY + G +Y+ PPLY +GK +YC+ + +
Sbjct: 512 MTDADVDGSHIDTLIMTFFFRYMPQMIQNGYLYIATPPLYLCRKGKTEEYCWTEEQRLAF 571
Query: 474 KSSF--PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+++ S + IQR+KGLGEM QLWETT++P+ RMLKQ+ I++A++A+ +FS LMG
Sbjct: 572 INNYGGGSESGIHIQRYKGLGEMNAHQLWETTMDPDNRMLKQVTIDNASDADRIFSMLMG 631
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 632 EDVGPRREFIEENATYANID 651
>gi|55377342|ref|YP_135192.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|448640227|ref|ZP_21677281.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
gi|55230067|gb|AAV45486.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049]
gi|445762017|gb|EMA13251.1| DNA gyrase subunit B [Haloarcula sinaiiensis ATCC 33800]
Length = 642
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/548 (48%), Positives = 371/548 (67%), Gaps = 17/548 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + + GT +RFWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLKPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISI- 209
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQ 174
D E++ E F + GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 210 ----DDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQ 265
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +R
Sbjct: 266 GTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVINDYATDNNLLKDLDDTLKGDDIR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 325 EGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEAIVGKAV 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR
Sbjct: 385 EAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F E LRY KII++
Sbjct: 445 NPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIEDLRYEKIILM 503
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE ++
Sbjct: 504 TDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDAERDQII 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V
Sbjct: 564 EEKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAV 623
Query: 535 DTRKELIQ 542
+ RKE I+
Sbjct: 624 EPRKEFIK 631
>gi|329770365|ref|ZP_08261747.1| DNA gyrase subunit B [Gemella sanguinis M325]
gi|328836488|gb|EGF86148.1| DNA gyrase subunit B [Gemella sanguinis M325]
Length = 638
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/552 (47%), Positives = 378/552 (68%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LE V RDG + + RG
Sbjct: 97 VILTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEAYVHRDGKIHSMMFERGDV 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +T + D+ GT IRF D ++F ++++ + RIRELAFLN +TI L+
Sbjct: 155 VQGITV----IGETDKTGTTIRFKADPEIFQETTVYEYDILRTRIRELAFLNKGITIILK 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E EK + + + GGL EYV+ LN +K LH+ + +++G +++++Q+ + Y
Sbjct: 211 DEREGQEKEE--TFCYEGGLLEYVEMLNENKDSLHEAIYVHGEMEGKEVEISMQYNT-GY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ +L YAN+I T +GGTH G K +LTR +NS GKK+K +K+K+ SL+G+ VREGL I
Sbjct: 268 ASNILSYANNINTHEGGTHESGFKTALTRIINSYGKKNKLIKEKE-SLTGDDVREGLVAI 326
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS++ PNP+FEGQTKT+LGN E+ + ++ E L +L +P V I+ K L A +A
Sbjct: 327 ISIKHPNPQFEGQTKTKLGNSEMSTITNKLFSEELDRFLLENPKVAKIIVEKGLQASRAR 386
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+AR+ R+K+ L ++LPGKLADCSS E E+F+VEGDSAGGSAK GR+ +FQA
Sbjct: 387 IAAKKARESTRRKNALEFTNLPGKLADCSSKDAAECELFLVEGDSAGGSAKLGRNSKFQA 446
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPL+GKILNVE+ + N+E+++LI A+G+G+ GE + LRYHKI+I+TDADVD
Sbjct: 447 ILPLKGKILNVEKVRIDKVLSNDEVRSLITAVGMGI-GETLNIDKLRYHKIVIMTDADVD 505
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+RY + L + G +Y+ PPL+ ++ GK+ YC+ D ELK+ + ++
Sbjct: 506 GSHIRTLLLTFFFRYMRELIEAGYVYIARPPLFGLKVGKKEYYCHTDEELKENIEKYAAD 565
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM +LW+TT++PE R++ ++ I+DA A+ F +LMG +V+ R++
Sbjct: 566 KKYTVQRYKGLGEMNAEELWDTTMDPEHRLMYKVSIDDAQRADAAFDTLMGEKVEPRRKF 625
Query: 541 I-QNAANLVNLD 551
I +NA N+VNLD
Sbjct: 626 IEENALNVVNLD 637
>gi|257051220|ref|YP_003129053.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
gi|256689983|gb|ACV10320.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940]
Length = 637
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/543 (48%), Positives = 366/543 (67%), Gaps = 11/543 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V R+G + Q + G P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSQKLEVEVSREGNVWKQTFDHGAP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT + +D D GT IRFWPD+++F T F +T+A R+RELAFLN + I L
Sbjct: 152 ADDLT-EIRSLDDPDETGTTIRFWPDEEIFETT-DFQFSTLANRLRELAFLNSGVEITL- 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDA 179
+D + + + + GG+ E+V++LN K PLHD V + +D D I +++ALQ ++
Sbjct: 209 ---ADDREERAETFQYEGGIREFVEYLNETKDPLHDEVVYFEDEDQDIQVEVALQATTEL 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GG+H+ G K +LTR +N + + D + +L GE +REGLT
Sbjct: 266 QG-SIHAFANNINTREGGSHLTGFKTALTRVVNDYATTNDLLSDIEETLKGEDIREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++ P+P+FEGQTKT+LGN EVR VV+ ++ E L Y E +P V +I+ K++ A KA
Sbjct: 325 VISIKHPDPQFEGQTKTKLGNSEVRGVVESAMHENLGTYFEENPAVAQAIVRKAVEAAKA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A +L R+KS L S++LPGKLADC + P +E+FI EGDSAGGSAKQ R+ FQ
Sbjct: 385 RKAAQKAEELTRRKSALESTALPGKLADCQTKDPSRAELFIAEGDSAGGSAKQARNPDFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LP+RGKILNVE+ + +NE+I+N+I ALG GV G++F + LRY KII TDADV
Sbjct: 445 AVLPIRGKILNVEKHRLDRILENEQIRNIITALGTGV-GDEFDLDELRYEKIIFATDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + DAE ++ +
Sbjct: 504 DGAHIRTLLLTFFYRHMRPLLEGGHVYAARPPLYRIRYRGETYDAMTDAERDEIIEEKCN 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
IQRFKGLGEM P QLW+TT+NPE R LK++ I+DAA A+ +FS LMG V+ RK+
Sbjct: 564 GNPTQIQRFKGLGEMNPQQLWDTTMNPENRFLKRITIDDAAAADKMFSVLMGDAVEPRKQ 623
Query: 540 LIQ 542
I+
Sbjct: 624 FIK 626
>gi|169235747|ref|YP_001688947.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Halobacterium
salinarum R1]
gi|167726813|emb|CAP13599.1| DNA gyrase subunit B [Halobacterium salinarum R1]
Length = 637
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/551 (49%), Positives = 376/551 (68%), Gaps = 21/551 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V V RDG Y +++ RG+P
Sbjct: 94 VILTVLHAGGKFDAKS--YQVSGGLHGVGVSVVNALSERLAVEVSRDGARYREQFERGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L V D GT IRF PD ++F T +D +T+ R+RELAFLN + I L
Sbjct: 152 VTDLQH----VGDSDDSGTLIRFRPDSEIFETTA-YDFSTLENRLRELAFLNSGVEITLT 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D EY GG+ E+V++LN + LHD V+ F+ + DGI++++A+Q D
Sbjct: 207 DERGDEPTQSTFEY--EGGIREFVEYLNETRNALHDDVIYFQGEDDGISVEIAMQASEDV 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
S T +AN+I T +GGTH+ G K +LTRT+N + + + D +L+G+ +REGLT
Sbjct: 265 QSSTH-AFANNINTREGGTHLTGFKTALTRTVNDYANDNNLLSELDGENLTGDDIREGLT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+++V + L Y E +P +++ ++ A K
Sbjct: 324 AVISVKHPDPQFEGQTKTKLGNSEVRGIVERAVNDGLGTYFEENPATAKAVVRTAVEAAK 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S PE++E+F+VEGDSAGGSAKQGR+ F
Sbjct: 384 ARKAAKKAEELTRRKSALGSTSLPGKLADCQSKAPEDAELFVVEGDSAGGSAKQGRNPGF 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL GKILNVE+ + +++E++++I ALG G+ G++F + LRY II++TDAD
Sbjct: 444 QAILPLGGKILNVEKHRLDRILEHDELRHIITALGTGI-GDEFDIDELRYENIIMMTDAD 502
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYD---DAELKKVK 474
VDGAHIRTLLLTFFYR+ K L + G +Y PPLY++ RGK YD +A+ +++
Sbjct: 503 VDGAHIRTLLLTFFYRHMKPLLEAGYVYAAQPPLYRIRYRGK----TYDAMTEADRERIV 558
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ +QRFKGLGEM P QLW+TT++PE R+LK++ +EDAA A+ +FS LMG V
Sbjct: 559 EEQCNGNPTQVQRFKGLGEMNPQQLWDTTMDPENRILKRITVEDAAAADKMFSVLMGDAV 618
Query: 535 DTRKELIQNAA 545
+ RK+ IQ A
Sbjct: 619 EPRKQFIQERA 629
>gi|333996461|ref|YP_004529074.1| DNA gyrase subunit B [Treponema azotonutricium ZAS-9]
gi|333737538|gb|AEF83487.1| DNA gyrase, B subunit [Treponema azotonutricium ZAS-9]
Length = 648
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/565 (49%), Positives = 378/565 (66%), Gaps = 23/565 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-- 58
+++T LHAGGKF +S Y VSGGLHGVG+SVVNALSE E V +G + Q Y G
Sbjct: 92 LVMTRLHAGGKFDKNS--YKVSGGLHGVGVSVVNALSEWCEAFVHLNGKVHTQSYKIGIP 149
Query: 59 -KPVTTLTCHVLPVDSKDRQ-GTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKL 115
P + VLP ++ GT IR+ D +F +T FD ++ R+RELAFLN L
Sbjct: 150 DAPAHEIQPSVLPYAGAGKERGTVIRWKADTSIFESTTYNFD--ALSNRLRELAFLNKGL 207
Query: 116 TIALRKED-SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKD-VDG-IT 168
I +R E S P + +E+ F GG++ +V++LN K L+ + G R D DG I
Sbjct: 208 KITIRDERLSTP---KVHEFKFEGGVQSFVEYLNQSKTVLYKDPIFIEGTRDDGKDGVIE 264
Query: 169 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 228
+++A+Q+ +D +++ M + N I T +GGTH+ G K++LTRTLN KKSK K + SL
Sbjct: 265 VEVAIQY-NDGFNEIMYSFVNDINTREGGTHLVGFKSALTRTLNEYLKKSKIAKKLEESL 323
Query: 229 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 288
SG+ VREGLT ++SV+VPNP+FEGQTK +LGN EV+ +V+ V E L +L+ HPDV+++
Sbjct: 324 SGDDVREGLTAVLSVKVPNPQFEGQTKAKLGNSEVKGIVEALVNEQLELFLDQHPDVINN 383
Query: 289 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 348
IL KS+ A KA +AA++ARD R+K+ + S LPGKL+DCS P E+FIVEGDSAGG
Sbjct: 384 ILEKSVLAAKARIAARQARDATRRKNAMDSVGLPGKLSDCSEKDPAVCELFIVEGDSAGG 443
Query: 349 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 408
SAKQGR+R+FQAIL L GK+LNVE+ + NE++Q +I ++G G G +F +RY
Sbjct: 444 SAKQGRNRQFQAILSLFGKMLNVEKTRIEKVVTNEKLQPIIASIGAGC-GVEFNVAKIRY 502
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
HKIII+ DADVDG+HIRTLLLTFFYRY L ++G +Y+ +PPLYK+ GKQ Y YDDA
Sbjct: 503 HKIIIMADADVDGSHIRTLLLTFFYRYMTELIEKGHVYLAMPPLYKIPVGKQNFYAYDDA 562
Query: 469 ELKKVKSSFPSN-ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
E K+ +IQR+KGLGEM P QLW+TT++P +R + Q+ ++DA EA +FS
Sbjct: 563 EKDKILGGLGKEIKKEAIQRYKGLGEMNPDQLWDTTMDPARRNIIQIHLDDAVEAERIFS 622
Query: 528 SLMGARVDTRKELI-QNAANLVNLD 551
+LMG V R+E I +NA + NLD
Sbjct: 623 TLMGEVVAPRREFIEENALAVSNLD 647
>gi|418689258|ref|ZP_13250380.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
gi|400361403|gb|EJP17369.1| DNA gyrase, B subunit [Leptospira interrogans str. FPW2026]
Length = 639
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/553 (46%), Positives = 371/553 (67%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY RG P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYERGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNIGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|282878003|ref|ZP_06286811.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
gi|281299838|gb|EFA92199.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310]
Length = 657
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/568 (46%), Positives = 375/568 (66%), Gaps = 26/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y RGK
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMTSQVFRDGKIYQQEYERGKA 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + + +GTR +FWPD +FTT F + IA R+RELAFLN + I L
Sbjct: 156 LYPVKV----IGETNLRGTRQQFWPDGSIFTTT-HFQWDIIARRMRELAFLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNEEGKTRTEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + SK ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADNDPVISKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTNYLEEHPTEAKQICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK + K +YCY +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKIIEEGHLYIATPPLYKCTYKNKASEYCYTEQ 569
Query: 469 ELKKVKSSFP-----SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
+ + + S ++++ QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFIDKYAQGEEDSKSIHT-QRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADAD 628
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 EIFSMLMGDDVEPRREFIEQNATYANID 656
>gi|417767171|ref|ZP_12415116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417770211|ref|ZP_12418121.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418684138|ref|ZP_13245327.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418705137|ref|ZP_13266002.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418713024|ref|ZP_13273751.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|418724755|ref|ZP_13283564.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|421117277|ref|ZP_15577640.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421124386|ref|ZP_15584643.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421135176|ref|ZP_15595301.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|24753767|gb|AAN64015.1|AF434658_12 DNA gyrase subunit B [Leptospira interrogans]
gi|321401258|gb|ADW83040.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401262|gb|ADW83042.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401266|gb|ADW83044.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401270|gb|ADW83046.1| DNA gyrase subunit B [Leptospira interrogans]
gi|400324101|gb|EJO76401.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400350290|gb|EJP02554.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|409947765|gb|EKN97759.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409962076|gb|EKO25818.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12621]
gi|410010988|gb|EKO69116.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410020594|gb|EKO87394.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410437517|gb|EKP86616.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410764988|gb|EKR35690.1| DNA gyrase, B subunit [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410790107|gb|EKR83801.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 08452]
gi|455668938|gb|EMF34110.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 639
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/553 (46%), Positives = 371/553 (67%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY RG P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYERGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNIGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|345016457|ref|YP_004818810.1| DNA topoisomerase IV subunit B [Thermoanaerobacter wiegelii Rt8.B1]
gi|344031800|gb|AEM77526.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 633
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/552 (48%), Positives = 378/552 (68%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G Y Q Y RG P T
Sbjct: 96 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVIVKQHGKIYRQIYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT I F PDK++F + FD++ +A R+RELAFLN + I L E
Sbjct: 154 DLEVIG----ETEETGTTITFKPDKEIFEETV-FDYDVLAQRLRELAFLNKGINIKLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
E+ + + GG+ +V++LN +K+ LH+ + K+ D +++ +Q+ +D+Y
Sbjct: 209 RHGKEE----VFNYEGGIISFVKYLNRNKEVLHEEPIYMEAKNSD-YEVEVCMQY-NDSY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD + +L GE VREGLT I
Sbjct: 263 TENIFSFANNIDTREGGTHLVGFKAALTKVINDYARKYGIIKDNEKNLQGEDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+ K+ A +A
Sbjct: 323 VSVKLKNPQFEGQTKTKLGNSEMRSIVENVVTEKLSAFLEENPSVAKVIVEKATQAARAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK GR+ RFQA
Sbjct: 383 EAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAKSGRNSRFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+ +I ALG GV G DF LRYHKI+I+TDADVD
Sbjct: 443 ILPLRGKILNVEKARLDKILSNEEIRAMITALGTGV-GNDFDISKLRYHKIVIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL K+ +
Sbjct: 502 GSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDRELDKILNEIGRE 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 562 N-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMGDKVEPRREF 620
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 621 IEKYAKTVRNLD 632
>gi|340350611|ref|ZP_08673590.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|445114741|ref|ZP_21378019.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
gi|339607607|gb|EGQ12539.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella
nigrescens ATCC 33563]
gi|444840613|gb|ELX67641.1| DNA gyrase, B subunit [Prevotella nigrescens F0103]
Length = 656
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/566 (46%), Positives = 372/566 (65%), Gaps = 23/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+R+G Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRNGKIYQQEYEQGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD +FTT I F + +A R+RELAFLN + I L
Sbjct: 156 LYPVKV----VGETDKTGTRQQFWPDGSIFTTTI-FQWDIVARRMRELAFLNAGIKITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNTEGKTRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ I ++GE R
Sbjct: 271 -YNENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDPQIAKQIEKAKIEITGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPAEAKLICDKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+ E LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGESDFEANTEKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTYKKVSEYCYTEQQ 569
Query: 470 ----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
L K N QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+A+ A+ +
Sbjct: 570 RLQFLDKYAGGDEENKAVHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENASTADEM 629
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 630 FSMLMGDDVEPRREFIEQNATYANID 655
>gi|384209248|ref|YP_005594968.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
gi|343386898|gb|AEM22388.1| D Gyrase B subunit [Brachyspira intermedia PWS/A]
Length = 636
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 363/554 (65%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q Y RG P
Sbjct: 94 VVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVNKDGKLYRQVYHRGIP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + + GT + F D ++F T + +D+ +A R+RELAFLN + I L
Sbjct: 152 EEP----VKEVGTSKKTGTTVTFKADDEIFETTV-YDYKILANRLRELAFLNRGIRITLV 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D + NE+++ GG+E ++ LN +KKPLHD + K+ D +++A+Q+ DA
Sbjct: 207 --DEREAEVVSNEFYYEGGIEMFIAHLNENKKPLHDKPIYLHKNEDKTDVEVAMQYV-DA 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE REGL
Sbjct: 264 YNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKSKITFMGEDTREGLVA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K +SA +A
Sbjct: 324 VVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEKIISAAQA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK GRDR FQ
Sbjct: 384 REAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKGGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++II+ DAD+
Sbjct: 444 AILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GASFDISKIRYGRVIIMADADI 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFP 478
DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D + K+ +
Sbjct: 503 DGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFVYAYSDEQRDKILAE-N 561
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG V R+
Sbjct: 562 KDKKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMGDEVKPRR 621
Query: 539 ELIQNAANLV-NLD 551
+ I++ A V NLD
Sbjct: 622 DFIESNARYVKNLD 635
>gi|373501103|ref|ZP_09591470.1| DNA gyrase, B subunit [Prevotella micans F0438]
gi|371950694|gb|EHO68548.1| DNA gyrase, B subunit [Prevotella micans F0438]
Length = 657
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/567 (45%), Positives = 372/567 (65%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSAHMKSQVFRDGNIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + + ++ GTR +FWPD +FTT F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKI----IGTTEKTGTRQQFWPDNSIFTTTT-FQWDIVARRMRELAYLNAGIKIILT 210
Query: 121 KEDSDPE--KNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
PE K + + GL+E+V++++ ++ L +DV+ + + GI I++A+ + +
Sbjct: 211 DMHPHPETGKTRTETFHAEDGLKEFVRYVDRHRQHLFNDVIYLKTEKQGIPIEIAIMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADGEPTISKQIEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPNEAKLICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA+ AR+ V++K+V+ LPGKLADCS P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARIAARNARESVQRKNVMSGGGLPGKLADCSKKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGED---FKKEALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEDDYEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCTYKKISEYCYTEQ 569
Query: 469 E----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
+ + K QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AAEA+
Sbjct: 570 QRQMFIDKYGDGTEDGKNIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVNIENAAEADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEQNATYANID 656
>gi|253573849|ref|ZP_04851191.1| DNA gyrase, B subunit [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846326|gb|EES74332.1| DNA gyrase, B subunit [Paenibacillus sp. oral taxon 786 str. D14]
Length = 636
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/556 (49%), Positives = 376/556 (67%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSTKVIVEVKRDGHIYQQEYHRGTP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + GT+ F+PD ++FT FD+NT+ RIRELAFLN + I+L
Sbjct: 153 ----QYDVRVIGDTTETGTKTTFYPDPEIFTETTVFDYNTLLTRIRELAFLNKGINISL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQWC 176
+D Q + + GG+ EYV++LN +++ LH+ V G R D I ++++LQ+
Sbjct: 208 ---TDERTGQSESFHYEGGIMEYVRFLNQNREVLHEEPIYVEGQR---DMIQVEISLQY- 260
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D Y++ + +AN+I T +GGTH G K++LTR +N +K+ +K+ D +L+G+ VREG
Sbjct: 261 NDGYTENIYSFANNIHTHEGGTHESGFKSALTRIINDYARKTGMIKENDSNLTGDDVREG 320
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P P+FEGQTKT+LGN EVR +V+ E L E+++ +P V IL KSL A
Sbjct: 321 LTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFMDENPSVSRRILEKSLQA 380
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++AR+L R+KS L S+LPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 381 SRAREAARKARELTRRKSALEVSALPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 440
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N EI+ +I ALG G+ GEDF RYHKIII+TD
Sbjct: 441 HFQAILPLRGKILNVEKARLDRILGNAEIRAIITALGTGI-GEDFDISKARYHKIIIMTD 499
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFF+RY + + + G +Y+ PPL+K+ER K V+Y + E ++ +
Sbjct: 500 ADVDGAHIRTLLLTFFFRYMRKIIEAGYVYIAQPPLFKIERNKVVRYANSEKERDQIIAE 559
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
F A ++QR+KGLGEM QLWETT++PE R+++Q+ I DA +A+ +F +LMG V+
Sbjct: 560 FGEGAKVNVQRYKGLGEMNAEQLWETTMDPESRVMQQVSISDAIQADAIFDTLMGDNVEP 619
Query: 537 RKELIQNAANLV-NLD 551
R+E I A V NLD
Sbjct: 620 RREFIHEHAKYVKNLD 635
>gi|189499015|ref|YP_001958485.1| DNA gyrase subunit B [Chlorobium phaeobacteroides BS1]
gi|189494456|gb|ACE03004.1| DNA gyrase, B subunit [Chlorobium phaeobacteroides BS1]
Length = 644
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/553 (46%), Positives = 366/553 (66%), Gaps = 18/553 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T++ AGGKF Y VSGGLHGVG SVVNALSE EV V+R+G + Q+Y +G P
Sbjct: 100 LVMTLIGAGGKF--DKGAYKVSGGLHGVGASVVNALSEWCEVEVYREGNIWFQRYHKGIP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + GT+ F PD +F +F + + R+RELAFLN L I ++
Sbjct: 158 QRDVEV----IGESTKTGTKTTFMPDPDIFKIT-EFRKDIVVDRMRELAFLNNILKIVVK 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-KPLHDVVGFRKDVDGITIDLALQWCSDA 179
D E + + GG++E+V + + ++ L + V + D +++ALQ+ +D+
Sbjct: 213 DIDGSEET-----FHYEGGIKEFVTFTDHNRISLLKEPVYISGERDSTVVEIALQY-NDS 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + Y N+I T +GGTH+ G + +LTRTLNS +K+ +K+ +SL+G+ +EGLT
Sbjct: 267 YQENVFSYVNNINTHEGGTHVTGFRKALTRTLNSYAQKNDLLKNLKLSLTGDDFKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+V P+FEGQTKT+LGN E + +V+ V E L+++ E +P VL +I+ K SA +
Sbjct: 327 IISVKVAEPQFEGQTKTKLGNSETQSIVESIVNEQLSDFAESNPGVLKTIIEKVKSAALS 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++A+DL R+KS L SS LPGKLADCS PE E++IVEGDSAGGSAKQGRDR FQ
Sbjct: 387 RDAARKAKDLTRRKSALESSGLPGKLADCSINDPEHCELYIVEGDSAGGSAKQGRDRSFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ M +NEEI+ +I ALG E+F E LRY KIII+TDADV
Sbjct: 447 AILPLKGKILNVEKARLHKMLENEEIKTIILALGTSFGEEEFSVEKLRYGKIIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE----LKKVKS 475
DGAHIRTLLLTFF+RY ++L + G +++ PPLY ++ GK+ +Y +DD E ++ ++
Sbjct: 507 DGAHIRTLLLTFFFRYMRSLIEAGKVFIAQPPLYLIKSGKEQKYAWDDDERNGIVESIRK 566
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+IQR+KGLGEM P QLW TT++PE R L Q+ +E+A EA+ VFS+LMG +V+
Sbjct: 567 KQKGRGNINIQRYKGLGEMNPEQLWSTTMDPEHRSLLQVSVENAMEADQVFSTLMGDKVE 626
Query: 536 TRKELIQNAANLV 548
R+ I+ A V
Sbjct: 627 PRRNFIEKNARYV 639
>gi|281491407|ref|YP_003353387.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis KF147]
gi|281375141|gb|ADA64657.1| DNA gyrase, subunit B [Lactococcus lactis subsp. lactis KF147]
Length = 651
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/534 (46%), Positives = 366/534 (68%), Gaps = 14/534 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+VTV +DG +Y+Q+Y RG L + DR+GT + F
Sbjct: 124 LHGVGSSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKI----IGETDRRGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV
Sbjct: 180 PDPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYV 238
Query: 145 QWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G
Sbjct: 239 EYLNENKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGF 297
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+ +LTR +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV
Sbjct: 298 RTALTRVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEV 357
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+V++ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPG
Sbjct: 358 TGIVNKLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPG 417
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NE
Sbjct: 418 KLADCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANE 477
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 478 EIRSLFTAMGTGF-GADYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 536
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPV 497
+Y+ PP+Y ++ G + + E L++ + + ++QR+KGLGEM
Sbjct: 537 YVYIAQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDH 596
Query: 498 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
QLWETT++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 597 QLWETTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|13878524|sp|O29720.2|GYRB_ARCFU RecName: Full=DNA gyrase subunit B
Length = 632
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/552 (47%), Positives = 372/552 (67%), Gaps = 17/552 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG+SVVNALSE LEV V R+G Y+QKY RG
Sbjct: 96 IVMTKLHAGGKF--SKKVYRVSGGLHGVGVSVVNALSEWLEVWVKRNGKIYYQKYQRGSR 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ GT +RF PD+++F T +F + +A R++ELA+LN L I L
Sbjct: 154 SPEAGHRTEVLGETKEHGTTVRFKPDREIFETT-EFKYEIVAQRLKELAYLNRGLKIILF 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E E+ + F G+ V+ LN ++KPLH+ + DG+++++A+Q+ +D+
Sbjct: 213 DEREGKEET----FHFEDGIIGLVRSLNRNRKPLHEPIYIETTKDGVSVEVAIQF-TDSD 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GG+H+ G +A LTR +N GKK K ++G +REGLT +
Sbjct: 268 VENIQAFANNINTSEGGSHVVGFRAGLTRAVNEYGKKHLK---KFEPVTGVDIREGLTAV 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+VP P+FEGQTKT+L N +V+ VV+ +V + +LE +P +++L+K + KA
Sbjct: 325 ISVKVPEPQFEGQTKTKLTNSDVKTVVESAVYSGVLRWLEENPAQAETLLNKFILNKKAR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRA++LV++K+ L ++LPGKLADCSS PEE E+FIVEG+SAGGSAKQ RDRRFQA
Sbjct: 385 EAAKRAKELVKRKNEL-ITTLPGKLADCSSKNPEERELFIVEGESAGGSAKQARDRRFQA 443
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP++GKI+NVE+ A + KN+EI+ +I A+G G+ G+DF RY +III+TDADVD
Sbjct: 444 ILPIKGKIINVEKAGMARVLKNDEIKAIISAIGAGI-GKDFDITKARYRRIIIMTDADVD 502
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY + L + G +Y+ PPLY++++GK+ Y Y D ELK+
Sbjct: 503 GAHIRTLLLTFFYRYMRPLIESGYLYIAQPPLYQIKKGKKSYYAYSDEELKRTLEQVGGG 562
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM P QLWETT+NPE R+L Q+ +EDA A+ +FS LMG V++R+
Sbjct: 563 ---EVQRYKGLGEMNPQQLWETTMNPENRILIQVTLEDAKRADELFSILMGEDVESRRNF 619
Query: 541 IQ-NAANLVNLD 551
I ++ + NLD
Sbjct: 620 IMAHSKEVKNLD 631
>gi|15790024|ref|NP_279848.1| DNA gyrase subunit B [Halobacterium sp. NRC-1]
gi|10580452|gb|AAG19328.1| DNA gyrase subunit B [Halobacterium sp. NRC-1]
Length = 611
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/547 (48%), Positives = 371/547 (67%), Gaps = 13/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V V RDG Y +++ RG+P
Sbjct: 68 VILTVLHAGGKFDAKS--YQVSGGLHGVGVSVVNALSERLAVEVSRDGARYREQFERGEP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L V D GT IRF PD ++F T +D +T+ R+RELAFLN + I L
Sbjct: 126 VTDLQH----VGDSDDSGTLIRFRPDSEIFETT-AYDFSTLENRLRELAFLNSGVEITLT 180
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D EY GG+ E+V++LN + LHD V+ F+ + DGI++++A+Q D
Sbjct: 181 DERGDEPTQSTFEY--EGGIREFVEYLNETRNALHDDVIYFQGEDDGISVEIAMQASEDV 238
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
S T +AN+I T +GGTH+ G K +LTRT+N + + + D +L+G+ +REGLT
Sbjct: 239 QSSTH-AFANNINTREGGTHLTGFKTALTRTVNDYANDNNLLSELDGENLTGDDIREGLT 297
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+++V + L Y E +P +++ ++ A K
Sbjct: 298 AVISVKHPDPQFEGQTKTKLGNSEVRGIVERAVNDGLGTYFEENPATAKAVVRTAVEAAK 357
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S PE++E+F+VEGDSAGGSAKQGR+ F
Sbjct: 358 ARKAAKKAEELTRRKSALGSTSLPGKLADCQSKAPEDAELFVVEGDSAGGSAKQGRNPGF 417
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL GKILNVE+ + +++E++++I ALG G+ G++F + LRY II++TDAD
Sbjct: 418 QAILPLGGKILNVEKHRLDRILEHDELRHIITALGTGI-GDEFDIDELRYENIIMMTDAD 476
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ K L + G +Y PPLY++ +A+ +++
Sbjct: 477 VDGAHIRTLLLTFFYRHMKPLLEAGYVYAAQPPLYRIRYRGNTYDAMTEADRERIVEEQC 536
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT++PE R+LK++ +EDAA A+ +FS LMG V+ RK
Sbjct: 537 NGNPTQVQRFKGLGEMNPQQLWDTTMDPENRILKRITVEDAAAADKMFSVLMGDAVEPRK 596
Query: 539 ELIQNAA 545
+ IQ A
Sbjct: 597 QFIQERA 603
>gi|319900374|ref|YP_004160102.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
gi|319415405|gb|ADV42516.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108]
Length = 657
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/564 (46%), Positives = 371/564 (65%), Gaps = 20/564 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+R+G Y Q+Y GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMTTQVFRNGKIYQQEYECGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + + GT+ FWPD +FT + ++ H T+ R+RELA+LN + I L
Sbjct: 158 LYAVK--EMGLCEPGLSGTKQTFWPDDSIFTVS-EYKHTTLQARLRELAYLNKGIRITLT 214
Query: 121 K-EDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
D E EYF + G++E+V++LN++ PL D V+ + G+ I+ A+ + +
Sbjct: 215 DLRVKDEEGKPLTEYFHSEEGVKEFVRYLNSNNTPLFDDVIYLNTEKSGVPIECAIMY-N 273
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK--SKTVKDKDISLSGEHVRE 235
Y + + Y N+I T +GGTH G +A+LTR L SK ++ + +SGE RE
Sbjct: 274 TGYRENLHSYVNNINTREGGTHEGGFRAALTRVLKKYADDNCSKALEKAKVEISGEDFRE 333
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GL +ISV+V P+FEGQTKT+LGN EV V+Q+V E L+ YLE HP I+ K L
Sbjct: 334 GLIAVISVKVSEPQFEGQTKTKLGNNEVSGAVNQAVGEALSNYLEEHPKEAKVIVDKVLL 393
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGGSAKQGR+
Sbjct: 394 AATARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGGSAKQGRN 453
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYHK 410
R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+ + LRY K
Sbjct: 454 RAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDSEDSKEANIDKLRYKK 513
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY +GK +YC+ D +
Sbjct: 514 VIIMTDADVDGSHIDTLIMTLFFRYFPQVIQNGYLYIATPPLYLCSKGKVKEYCWTDQQR 573
Query: 471 KKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
+K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E+AAEA+ VFS
Sbjct: 574 QKFIDAYGGGSENAIHT-QRYKGLGEMNPDQLWETTMNPENRMLKQVHLENAAEADYVFS 632
Query: 528 SLMGARVDTRKELIQNAANLVNLD 551
LMG V R++ I++ A N+D
Sbjct: 633 MLMGEDVGPRRDFIESNATYANID 656
>gi|323703937|ref|ZP_08115567.1| DNA gyrase, B subunit [Desulfotomaculum nigrificans DSM 574]
gi|323531095|gb|EGB21004.1| DNA gyrase, B subunit [Desulfotomaculum nigrificans DSM 574]
Length = 636
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/532 (50%), Positives = 363/532 (68%), Gaps = 18/532 (3%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE LEV + R+G YHQ YSRG PV+ L + GT++ F
Sbjct: 117 LHGVGVSVVNALSEKLEVEIKRNGNIYHQAYSRGVPVSELKI----IGKSKSTGTKVTFK 172
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F F T+ R+RELA+LN + I ++ E DP Q + F GG+ ++V
Sbjct: 173 PDPEIFEETT-FSLETLVQRLRELAYLNKGVKITIKDERKDPPVEQ--TFQFDGGIRDFV 229
Query: 145 QWLNTDKKPLHD----VVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHI 200
+ LN +K+ LH V G ++ I +++ALQ+ +D Y++ +L +AN+I T+DGGTH
Sbjct: 230 KHLNRNKQVLHSKPIYVTGEKEQ---IIVEIALQY-NDTYNENILSFANNIHTVDGGTHE 285
Query: 201 EGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGN 260
G K +LTR +N G+ +K+ D +LSGE +REG T +ISV+V P+FEGQTKT+LGN
Sbjct: 286 IGFKTALTRVVNDYGRNHNLLKNSDPNLSGEDIREGATVVISVKVREPQFEGQTKTKLGN 345
Query: 261 PEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSS 320
EVR +VD + L YLE +P V I+ K+++A +A AA++AR+L R+KS L + S
Sbjct: 346 SEVRGIVDSIFADGLATYLEENPTVGKRIIEKAITAARAREAARKARELTRRKSALDTMS 405
Query: 321 LPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMY 380
LPGKLADCS P SE+++VEGDSAGGSAKQGRDRRFQAILPLRGKILNVE+ +
Sbjct: 406 LPGKLADCSEKDPSVSELYLVEGDSAGGSAKQGRDRRFQAILPLRGKILNVEKARMDKIL 465
Query: 381 KNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLF 440
NEEI+ +I ALG G+ G+DF RYHKIII+TDADVDGAHIRTLLLTFFYR+ + L
Sbjct: 466 ANEEIRAMITALGCGI-GQDFDISKARYHKIIIMTDADVDGAHIRTLLLTFFYRHMRPLI 524
Query: 441 DEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLW 500
+ G +Y+ PPL++V +GK Y Y D EL+++ + + +IQR+KGLGEM P QLW
Sbjct: 525 EAGYVYIAQPPLFRVRKGKLDSYVYSDHELEELLKRVGYDNV-NIQRYKGLGEMNPEQLW 583
Query: 501 ETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQ-NAANLVNLD 551
ETT++P+ R + Q+ +EDA EA+ FS LMG RV+ R++ IQ NA + NLD
Sbjct: 584 ETTMDPDTRTVLQVTLEDAIEADATFSMLMGDRVEPRRDFIQENAQYVRNLD 635
>gi|255659815|ref|ZP_05405224.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
gi|260847890|gb|EEX67897.1| DNA gyrase, B subunit [Mitsuokella multacida DSM 20544]
Length = 688
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/553 (49%), Positives = 379/553 (68%), Gaps = 14/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG GY VSGGLHGVG+SVVNALS S+EV V RDG Y + RG
Sbjct: 147 VVLTVLHAGGKFGGD--GYKVSGGLHGVGVSVVNALSTSMEVQVKRDGKIYEIAFERGVT 204
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
LT + GTR+ F PD ++F+ + + T+ R+REL+FLN +TI L
Sbjct: 205 TKPLTVVG----TTTETGTRVHFMPDPEIFSVTT-YSYETLRHRLRELSFLNHGITIGLH 259
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E +P +++ ++ F GG+ +V+ LN K+ L+ + + F D +++A+Q+ +D+
Sbjct: 260 DERVEPVRSE--QFHFDGGISSFVEHLNRKKEVLNPEPIYFNGVKDDTVVEIAMQY-NDS 316
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + + N+I T +GGTH+ G K +LTR N +K +KDKD +LSG+ VREGLTC
Sbjct: 317 YQENIYSFVNNINTEEGGTHLAGFKLALTRAANDFARKQGILKDKDSNLSGDDVREGLTC 376
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++ P+FEGQTKT+LGN EVR +VD V E L+EY + +P + I+ K++ A +A
Sbjct: 377 VISLKIREPQFEGQTKTKLGNSEVRGIVDSIVTEGLSEYFDENPAITKRIIDKAIMAARA 436
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+ L SSLPGKLADCS PE++EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 437 REAARKARELTRRKNALEVSSLPGKLADCSVKDPEQAEIYLVEGDSAGGSAKQGRDRRFQ 496
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ ++ N EI+ +I A G G+ EDF RY KIII+TDADV
Sbjct: 497 AILPLRGKILNVEKARLDKIFANAEIRTMITAFGTGIS-EDFDLSKRRYGKIIIMTDADV 555
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YRY K L + G +Y+ PPLY++ +GK+ Y Y D EL K
Sbjct: 556 DGAHIRTLLLTFLYRYMKPLIEHGHVYIAQPPLYQIRKGKKHWYTYSDDELSKKLDEVGR 615
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + ++QR+KGLGEM P QLWETT++PE R + ++ +EDA EA+ +F+ LMG +V+ R++
Sbjct: 616 DGV-TVQRYKGLGEMNPEQLWETTMDPEGRTMLRVEMEDAEEADELFTILMGDKVEPRRQ 674
Query: 540 LIQNAANLV-NLD 551
I+ A LV NLD
Sbjct: 675 FIEENAKLVRNLD 687
>gi|448627574|ref|ZP_21672040.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
gi|445758882|gb|EMA10178.1| DNA gyrase subunit B [Haloarcula vallismortis ATCC 29715]
Length = 642
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/547 (48%), Positives = 369/547 (67%), Gaps = 15/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQW 175
D + + + GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 210 ---IDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQG 266
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +RE
Sbjct: 267 TDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVINDYATDNNLLKDLDDTLKGDDIRE 325
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 326 GLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEAIVGKAVE 385
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR+
Sbjct: 386 AAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGRN 445
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F E LRY KII++T
Sbjct: 446 PDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIEDLRYEKIILMT 504
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE ++
Sbjct: 505 DADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDAERDRIIE 564
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V+
Sbjct: 565 EKCDGNPTQVQRFKGLGEMNPDQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAVE 624
Query: 536 TRKELIQ 542
RKE I+
Sbjct: 625 PRKEFIK 631
>gi|300774234|ref|ZP_07084101.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
gi|300758913|gb|EFK55742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium
spiritivorum ATCC 33861]
Length = 652
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/565 (46%), Positives = 383/565 (67%), Gaps = 25/565 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L V RDG + Q+Y +GKP
Sbjct: 98 LVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V + +R GT + F+PD ++FT ++++T++ R+RELAFLN +LTI
Sbjct: 156 ----KYDVKAIGESERTGTTVTFFPDPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIV 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD----VVGFRKDVDGITIDLALQ 174
+E D + + +F GGL+E+V++L+ +++ L V G ++ G+ ++LALQ
Sbjct: 212 DEREILDDGSFRKDVFFSEGGLQEFVKFLDGNRQSLISNPIYVEGIKQ---GVPVELALQ 268
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ +D YS+ + Y N+I TI+GG+H+ G + LTRTL + S +K+ + ++G+ R
Sbjct: 269 Y-NDTYSENVHSYVNNINTIEGGSHVAGFRRGLTRTLKKYAEDSGLLKNLKVEIAGDDFR 327
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L+ YLE +P I+ K +
Sbjct: 328 EGLTAVISVKVAEPQFEGQTKTKLGNNEVMGAVDVAVGEILSTYLEENPREAKMIVQKVV 387
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AA++AR++V++K+V+ S LPGKLADCS P + EIF VEGDSAGG+AKQGR
Sbjct: 388 IAAQARAAARKAREMVQRKTVMGGSGLPGKLADCSDNDPHKCEIFFVEGDSAGGTAKQGR 447
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHK 410
DR+FQAI+PLRGKILNVE+ E +Y+NEEI+N+ ALG+ V D K E LRYHK
Sbjct: 448 DRKFQAIMPLRGKILNVEKAMEHKIYENEEIKNMFTALGVSVGTADDAKALNLEKLRYHK 507
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE- 469
I+I+TDADVDG+HI TL+LTF++RY K L + G +Y+ PPLY V++GK+ +Y + + +
Sbjct: 508 IVIMTDADVDGSHIATLILTFYFRYMKELIENGYVYIATPPLYLVKKGKESEYAWTEEQR 567
Query: 470 ---LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVF 526
++++K + ++++ +QR+KGLGEM QLW+TT+NPE R L+Q+ I++AAE + +F
Sbjct: 568 LQAIQRLKGAGKEDSVH-VQRYKGLGEMNAEQLWDTTMNPEHRTLRQVTIDNAAECDRIF 626
Query: 527 SSLMGARVDTRKELIQNAANLVNLD 551
S LMG V R+E I+ A +D
Sbjct: 627 SMLMGDEVAPRREFIEKNARYAKID 651
>gi|24212705|ref|NP_710186.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45655919|ref|YP_000005.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|386072493|ref|YP_005986810.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|417761365|ref|ZP_12409377.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|417776551|ref|ZP_12424387.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|417784799|ref|ZP_12432504.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|418670039|ref|ZP_13231413.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418672460|ref|ZP_13233799.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|418707603|ref|ZP_13268423.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418730771|ref|ZP_13289247.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|421087509|ref|ZP_15548345.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|421104639|ref|ZP_15565234.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421123297|ref|ZP_15583579.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|24193336|gb|AAN47204.1|AE011192_5 DNA gyrase subunit B [Leptospira interrogans serovar Lai str.
56601]
gi|45599152|gb|AAS68642.1| DNA gyrase subunit B [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|321401260|gb|ADW83041.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401264|gb|ADW83043.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401268|gb|ADW83045.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401272|gb|ADW83047.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401278|gb|ADW83050.1| DNA gyrase subunit B [Leptospira interrogans]
gi|353456282|gb|AER00827.1| DNA gyrase subunit B [Leptospira interrogans serovar Lai str. IPAV]
gi|409942779|gb|EKN88384.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000624]
gi|409951588|gb|EKO06102.1| DNA gyrase, B subunit [Leptospira interrogans str. C10069]
gi|410344041|gb|EKO95236.1| DNA gyrase, B subunit [Leptospira interrogans str. Brem 329]
gi|410366091|gb|EKP21484.1| DNA gyrase, B subunit [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410429758|gb|EKP74133.1| DNA gyrase, B subunit [Leptospira santarosai str. HAI1594]
gi|410573693|gb|EKQ36739.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000621]
gi|410580588|gb|EKQ48410.1| DNA gyrase, B subunit [Leptospira interrogans str. 2002000623]
gi|410754329|gb|EKR15984.1| DNA gyrase, B subunit [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410772024|gb|EKR47218.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774333|gb|EKR54341.1| DNA gyrase, B subunit [Leptospira interrogans str. UI 12758]
gi|455790085|gb|EMF41975.1| DNA gyrase, B subunit [Leptospira interrogans serovar Lora str. TE
1992]
gi|456824447|gb|EMF72884.1| DNA gyrase, B subunit [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456971873|gb|EMG12397.1| DNA gyrase, B subunit [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
gi|456985971|gb|EMG21650.1| DNA gyrase, B subunit [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 639
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/553 (46%), Positives = 371/553 (67%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYEKGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNIGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|448688768|ref|ZP_21694505.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
gi|445778638|gb|EMA29580.1| DNA gyrase subunit B [Haloarcula japonica DSM 6131]
Length = 642
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/548 (48%), Positives = 371/548 (67%), Gaps = 17/548 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISIH 210
Query: 121 KE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQ 174
E D + E Y+ GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 211 DERDGETETFAYD-----GGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQ 265
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +R
Sbjct: 266 GTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTLKGDDIR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 325 EGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEAIVGKAV 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR
Sbjct: 385 EAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY KII++
Sbjct: 445 NPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRYEKIILM 503
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE ++
Sbjct: 504 TDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDAERDRII 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V
Sbjct: 564 EEKCDGNPTQVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAV 623
Query: 535 DTRKELIQ 542
+ RKE I+
Sbjct: 624 EPRKEFIK 631
>gi|167755161|ref|ZP_02427288.1| hypothetical protein CLORAM_00666 [Clostridium ramosum DSM 1402]
gi|365832183|ref|ZP_09373724.1| DNA gyrase, B subunit [Coprobacillus sp. 3_3_56FAA]
gi|374626903|ref|ZP_09699311.1| DNA gyrase, B subunit [Coprobacillus sp. 8_2_54BFAA]
gi|167705211|gb|EDS19790.1| DNA gyrase, B subunit [Clostridium ramosum DSM 1402]
gi|365260926|gb|EHM90863.1| DNA gyrase, B subunit [Coprobacillus sp. 3_3_56FAA]
gi|373913448|gb|EHQ45285.1| DNA gyrase, B subunit [Coprobacillus sp. 8_2_54BFAA]
Length = 641
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 376/553 (67%), Gaps = 13/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG EY+Q++ G KP
Sbjct: 98 IFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVNVHRDGHEYYQRFENGGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT + F DK +F +D++T+ RIRELAFLN L ++L
Sbjct: 156 AGELKI----IGDSDITGTIVTFKADKIIFKEGTVYDYDTLRQRIRELAFLNKGLRLSL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDA 179
ED ++ +EY++ GG++EYV ++N +K P+H+ + + +D+ ITI++ +Q+ +D
Sbjct: 211 -EDQRNGVDRKHEYYYEGGIKEYVAYINKNKTPIHEEIIYVEDMQQEITIEVGMQY-NDG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T +GGTH EG + +LTR +N+ K +K + +LSG+ VREGLT
Sbjct: 269 YQSNIYSFCNNINTHEGGTHEEGFRLALTRVINNYAKSKGLLKKDEEALSGDDVREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+ + L ++L +PD I+ K++ A +A
Sbjct: 329 IISVKHPDPQYEGQTKTKLGNAEVRKIASNIISASLDKFLLENPDTAKIIVDKAIVAARA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+K+VL S+LPGKLADCSS E EIFIVEGDSAGGSAK GRDRR Q
Sbjct: 389 RMAAKKAREMTRRKNVLEVSNLPGKLADCSSKDASECEIFIVEGDSAGGSAKMGRDRRIQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE+F + LRYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKSRLEKILGNAEIRSMITAFGTGI-GEEFNLDKLRYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIR L+LTF YRY + L + G +Y PPLY ++ GK YCY D EL +K+
Sbjct: 508 DGGHIRILMLTFLYRYLRPLVEGGFVYAAQPPLYLLKHGKDEYYCYSDEELDDLKTKIGE 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A YSIQR+KGLGEM QLWETT++PE+R+L Q+ +++A EA+++F LMG +V+ R+E
Sbjct: 568 GAKYSIQRYKGLGEMNAEQLWETTMDPEKRILNQIDLDEAMEADMIFDMLMGEKVEPRRE 627
Query: 540 LIQ-NAANLVNLD 551
IQ NA + +LD
Sbjct: 628 FIQENAKYVTDLD 640
>gi|300711735|ref|YP_003737549.1| DNA topoisomerase II subunit B [Halalkalicoccus jeotgali B3]
gi|448296156|ref|ZP_21486217.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
gi|299125418|gb|ADJ15757.1| DNA topoisomerase II subunit B (DNA gyrase) [Halalkalicoccus
jeotgali B3]
gi|445582879|gb|ELY37219.1| DNA gyrase subunit B [Halalkalicoccus jeotgali B3]
Length = 635
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/546 (48%), Positives = 372/546 (68%), Gaps = 13/546 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEV + RDG +H ++ G P
Sbjct: 94 VIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVEIRRDGAVWHHRFDHGAP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V +++++ GT +RFWPD +F +F +T+ RIRELAFLNP + I L
Sbjct: 152 EGDIE-RVRDLEAEEETGTTVRFWPDDGIFEDR-EFVVSTLENRIRELAFLNPGVEITLA 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-GITIDLALQWCSDA 179
E + E + + GG+ E+V++LN + PLH+ V + D + I +++A+Q +D
Sbjct: 210 DERDETEST----FQYDGGIREFVEYLNETRTPLHEDVLYLDDEERNIQVEVAMQ-ATDE 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ +AN+I T +GGTH+ G K +LTR +N + + D +L GE +REGLT
Sbjct: 265 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANGEGLLDEIDENLRGEDIREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS++ P+P+FEGQTKT+LGN EVR +V+ +V E L Y E HPD +++ K++ A KA
Sbjct: 325 VISIKHPDPQFEGQTKTKLGNSEVRGIVESAVHEGLGTYFEEHPDTAQAVVRKAVEAAKA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+A +L R+KS L S++LPGKLADC + P E+E+F+VEGDSAGGSAKQGR+R+FQ
Sbjct: 385 RKAAKQAEELTRRKSALESTALPGKLADCQTRDPNEAELFVVEGDSAGGSAKQGRNRKFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +N EI++LI A+G GV GE+F + RY +I+I+TDADV
Sbjct: 445 AILPLKGKILNVEKHRLDRILENNEIRDLITAVGAGV-GEEFDIDEARYKRIVIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLT FYR+ + L + G +Y PPLY++ G + + +AE + + +
Sbjct: 504 DGAHIRTLLLTLFYRHMRPLIEAGYVYAAQPPLYRLRYGGETREAMAEAEREAIIDEY-- 561
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A IQRFKGLGEM P QLWETT+NP+ R+LK++ +EDAA A+ +FS LMG V+ RK+
Sbjct: 562 GAPDRIQRFKGLGEMNPDQLWETTMNPDNRVLKRVTVEDAAAADRMFSVLMGDAVEPRKQ 621
Query: 540 LIQNAA 545
IQ A
Sbjct: 622 FIQEHA 627
>gi|182416761|ref|ZP_02948158.1| DNA gyrase, B subunit [Clostridium butyricum 5521]
gi|237669641|ref|ZP_04529619.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379418|gb|EDT76913.1| DNA gyrase, B subunit [Clostridium butyricum 5521]
gi|237654875|gb|EEP52437.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 637
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 276/554 (49%), Positives = 385/554 (69%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE VTV R+G + Q+YS+GK
Sbjct: 95 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEECRVTVKREGAIWQQEYSKGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T V + GT++ F PD ++F I FD +A R+RELAFLN + I L
Sbjct: 153 LTD----VEKIGESSESGTQVYFKPDAEIFDEVI-FDFEILAQRLRELAFLNKGIYIKLV 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
+ EK + + + GG++ +V +LN +K LH+ + + + D +++++ALQ+ +D
Sbjct: 208 DLREENEKEEV--FHYEGGIKSFVSYLNRNKVALHEEPIYIEGIKDNVSVEVALQY-NDG 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+ +REGLT
Sbjct: 265 YTENIFSFANNIDTVEGGTHLVGFKTALTRAFNDYAKKFGHIKENDKNFTGDDIREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++ P+FEGQTKT+LGN EVR +VD V E ++ +LE +P V I+ K+L A +A
Sbjct: 325 VVSVKIEEPQFEGQTKTKLGNSEVRGIVDSIVGECISTFLEENPSVGKMIVDKALMAARA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R KSVL S+LPGKLADCSS P+E EI+IVEGDSAGGSAKQGR+R+FQ
Sbjct: 385 RDAARKARELTR-KSVLERSTLPGKLADCSSKDPKECEIYIVEGDSAGGSAKQGRNRKFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE++ + + I++++ A G G+ G DF E +RY +III+TDADV
Sbjct: 444 AILPLRGKILNVEKQRLDRILNADTIRSMVTAFGAGI-GNDFDIEKIRYDRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L DEG +Y+ PPLYK+ +GK+ Y Y DAEL++V F
Sbjct: 503 DGAHIRTLLLTFFYRYMRPLIDEGHVYIAQPPLYKISKGKKEHYAYSDAELEQVLIDFGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT++PEQR+L ++ +EDA +A+ +F+ LMG +V+ RK
Sbjct: 563 KDNSTDIQRYKGLGEMNASQLWDTTMDPEQRILLRVNVEDAMQADEIFTILMGEKVEPRK 622
Query: 539 ELI-QNAANLVNLD 551
E I QNA N+VNLD
Sbjct: 623 EFIQQNAKNVVNLD 636
>gi|392389999|ref|YP_006426602.1| DNA gyrase subunit B [Ornithobacterium rhinotracheale DSM 15997]
gi|390521077|gb|AFL96808.1| DNA gyrase, B subunit [Ornithobacterium rhinotracheale DSM 15997]
Length = 649
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/562 (47%), Positives = 382/562 (67%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS L TV+R+G Y Q+Y+RGK
Sbjct: 95 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSNKLTATVYRNGKIYQQEYARGKA 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + DR GT + F PD +F ++ T+A R+REL+FLN ++I L
Sbjct: 153 L----GDVQEIGETDRTGTTVTFSPDDSIFNHT-EYSFETLAARLRELSFLNKGISITLT 207
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCS 177
E E Y +E F + GGL+E+V++++ +++PL V F + ++D I +++A+++ +
Sbjct: 208 DERVKDENGNYLSEVFHSEGGLKEFVEFIDENREPLMQKVIFMEGEIDDIPVEVAMRYNT 267
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREG 236
++++ + Y N+I T +GGTH+ G + +LTRTL + + K+KD IS++G+ REG
Sbjct: 268 -SFNENLHSYVNNINTHEGGTHLTGFRRALTRTLKKYADEKMSAKEKDKISITGDDFREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+V P+FEGQTKT+LGN EV VD+ V E LT YLE +P I+ K + A
Sbjct: 327 LTAVVSVKVMEPQFEGQTKTKLGNSEVSGAVDKIVSEMLTNYLEENPSEAQIIVDKVVLA 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AAK+AR++V++KS + S LPGKLADCSS P ESEIF+VEGDSAGG+AKQGRDR
Sbjct: 387 AKARQAAKKAREMVQRKSPMGGSGLPGKLADCSSKDPYESEIFLVEGDSAGGTAKQGRDR 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKII 412
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K E LRYHKI+
Sbjct: 447 HFQAILPLRGKILNVEKAMQHKVFENEEIKNIFTALGVTIGTEEDAKALNTEKLRYHKIV 506
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HI TL+LTFF+RY K L + G IY+ PPLY +++GKQ Y + D E ++
Sbjct: 507 IMTDADVDGSHIATLILTFFFRYMKELIENGNIYIATPPLYLLKKGKQEIYAWGDKEREE 566
Query: 473 VKSSFPSNAL---YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ + S+QR+KGLGEM QLW+TT+NPE R L+Q+ IE+A+EA+ +FS L
Sbjct: 567 IQRQMSPDGTGRGISVQRYKGLGEMNAEQLWDTTMNPENRKLRQVNIENASEADRIFSML 626
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A N+D
Sbjct: 627 MGDDVPPRREFIEKNAVYANID 648
>gi|282880626|ref|ZP_06289332.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
gi|281305521|gb|EFA97575.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1]
Length = 657
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/568 (46%), Positives = 375/568 (66%), Gaps = 26/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GK
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMTSQVFRDGKIYQQEYEKGKA 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D++GTR +FWPD +FTT F + IA R+RELAFLN + I L
Sbjct: 156 LYPVKV----VGETDKRGTRQQFWPDGSIFTTT-HFQWDIIARRMRELAFLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNEEGKTRTEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + SK ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADSEPTISKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPTEAKQICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNFMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEADREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK + K +YCY +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCSYKNKASEYCYTEQ 569
Query: 469 ELKKVKSSFP-----SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
+ + + S ++++ QR+KGLGEM P QLWETT+NP+ R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFIDKYANGEEDSKSIHT-QRYKGLGEMNPEQLWETTMNPKTRLLKQVTIENAADAD 628
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 EIFSMLMGDDVEPRREFIEKNATYANID 656
>gi|227538317|ref|ZP_03968366.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241832|gb|EEI91847.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300]
Length = 652
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/562 (46%), Positives = 381/562 (67%), Gaps = 19/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L V RDG + Q+Y +GKP
Sbjct: 98 LVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V + +R GT + F+PD ++FT ++++T++ R+RELAFLN +LTI
Sbjct: 156 ----KYDVKAIGESERTGTTVTFFPDPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIV 211
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+E D + + +F GGL+E+V++L+ +++ L D + G+ ++LALQ+ +
Sbjct: 212 DEREILDDGSFRKDVFFSEGGLQEFVKFLDGNRQSLIPDPIYVEGIKQGVPVELALQY-N 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D YS+ + Y N+I TI+GG+H+ G + LTRTL + S +K+ + ++G+ REGL
Sbjct: 271 DTYSENVHSYVNNINTIEGGSHVAGFRRGLTRTLKKYAEDSGLLKNLKVEIAGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VD +V E L+ YLE +P I+ K + A
Sbjct: 331 TAVISVKVAEPQFEGQTKTKLGNNEVMGAVDVAVGEILSTYLEENPREAKIIVQKVVIAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+V+ S LPGKLADCS P + EIF VEGDSAGG+AKQGRDR+
Sbjct: 391 QARAAARKAREMVQRKTVMGGSGLPGKLADCSDNDPHKCEIFFVEGDSAGGTAKQGRDRK 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAI+PLRGKILNVE+ E +Y+NEEI+N+ ALG+ V D K E LRYHKI+I
Sbjct: 451 FQAIMPLRGKILNVEKAMEHKIYENEEIKNMFTALGVSVGTPDDAKALNLEKLRYHKIVI 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE---- 469
+TDADVDG+HI TL+LTF++RY K L + G +Y+ PPLY V++GK+ QY + + +
Sbjct: 511 MTDADVDGSHIATLILTFYFRYMKELIENGYVYIATPPLYLVKKGKESQYAWTEDQRLQA 570
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++++K + ++++ +QR+KGLGEM QLW+TT+NPE R L+Q+ I++AAE + +FS L
Sbjct: 571 IQRLKGAGKEDSVH-VQRYKGLGEMNAEQLWDTTMNPEHRTLRQVTIDNAAECDRIFSML 629
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A +D
Sbjct: 630 MGDEVAPRREFIEKNARYAKID 651
>gi|418699886|ref|ZP_13260835.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
gi|321401274|gb|ADW83048.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401276|gb|ADW83049.1| DNA gyrase subunit B [Leptospira interrogans]
gi|321401280|gb|ADW83051.1| DNA gyrase subunit B [Leptospira interrogans]
gi|410761007|gb|EKR27196.1| DNA gyrase, B subunit [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 639
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/553 (46%), Positives = 371/553 (67%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYEKGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSTLSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNIGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|402494030|ref|ZP_10840777.1| DNA gyrase subunit B [Aquimarina agarilytica ZC1]
Length = 645
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/561 (45%), Positives = 370/561 (65%), Gaps = 22/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G + Q+Y RGK
Sbjct: 96 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLHATVFREGKVWEQEYERGKA 153
Query: 61 VTTLTCHVLPVDSK---DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
V PV S D+ GT + F PD+ +F ++++++T+A R+RELA+LN +TI
Sbjct: 154 V-------YPVKSTGDTDKNGTIVTFLPDRSIFQQTVEYNYDTLASRMRELAYLNKGITI 206
Query: 118 ALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
L + EK ++ +E F + GL+E+V +L+ + P+ V+ + + I +++A+
Sbjct: 207 TLTDARNTDEKGEFISETFHSNEGLKEFVSFLDASRTPIIGHVIAMEGEKNDIPVEVAMI 266
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ +D+Y++ + Y N+I T +GGTH+ G + LT TL S + ++G+ R
Sbjct: 267 Y-NDSYAENLHSYVNNINTHEGGTHLSGFRRGLTSTLKKFADNSGLLDKLKFEIAGDDFR 325
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P +I+ K +
Sbjct: 326 EGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPADAKTIIQKVI 385
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AAK+AR++V++K+V+ LPGKL+DCS T P E EIF+VEGDSAGG+AKQGR
Sbjct: 386 LAAQARHAAKKAREMVQRKTVMSIGGLPGKLSDCSETDPAECEIFLVEGDSAGGTAKQGR 445
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----ALRYHK 410
DR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHK
Sbjct: 446 DRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVSIGTEEDSKALNLTKLRYHK 505
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+ DADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY V++G + QY ++D +
Sbjct: 506 VVIMCDADVDGSHIATLILTFFFRYMKELIEQGYVYIAAPPLYLVKKGAKKQYAWNDDQR 565
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ + N+ IQR+KGLGEM QLW+TT+NPE R ++Q+ IE EA+ VFS LM
Sbjct: 566 DLLVKEYGENS--KIQRYKGLGEMNAEQLWDTTMNPEFRTMRQVTIESMTEADRVFSMLM 623
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 624 GDEVPPRREFIEKNAIYANID 644
>gi|282859419|ref|ZP_06268525.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|424900188|ref|ZP_18323730.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
gi|282587817|gb|EFB93016.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010]
gi|388592388|gb|EIM32627.1| DNA gyrase, B subunit [Prevotella bivia DSM 20514]
Length = 656
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/566 (45%), Positives = 376/566 (66%), Gaps = 23/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+R+G Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMMSQVFREGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V ++ GTR +FWPD +FTT + F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETEKTGTRQQFWPDGTIFTTTV-FQWDVVARRMRELAYLNAGIKITLI 210
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
DPE + F GL+EYV++++ ++ L +DV+ + + G+ I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEIFHAKDGLKEYVRYVDRHRQHLFNDVIYLKSEKQGVPIEVAIMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G + +LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRTALTRTLKTYADNDAQISKQIEKAKIEITGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +ISV+V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I +K
Sbjct: 330 REGLTAVISVKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSAYLEEHPSEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 VLAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+ + DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEEDSDFEANIDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYRY + ++G +++ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLFIATPPLYKCTYKKVSEYCYTEQ 569
Query: 469 ELKKVKSSFPS---NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
+ + + + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AA+A+ V
Sbjct: 570 QRQAFIDKYGAGEEGKTIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENAADADEV 629
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 630 FSMLMGDDVEPRREFIEQNATYANID 655
>gi|269118649|ref|YP_003306826.1| DNA gyrase subunit beta [Sebaldella termitidis ATCC 33386]
gi|268612527|gb|ACZ06895.1| DNA gyrase, B subunit [Sebaldella termitidis ATCC 33386]
Length = 642
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/558 (48%), Positives = 372/558 (66%), Gaps = 15/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF ++ Y VSGGLHGVG+SVVNALSE+LE + +DG ++QKY RG P
Sbjct: 92 VVLTVLHAGGKF--NNDNYKVSGGLHGVGVSVVNALSETLEAIITKDGKVWYQKYHRGVP 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + +D GT IRF D ++F T +++D+ + R++E+A+LN L I L
Sbjct: 150 EEDIKQ--IGEAPEDAHGTTIRFKADGEIFET-LEYDYEILLTRLKEMAYLNKGLRIILS 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVD-----GITIDLALQW 175
E +K + ++ F GG+ +++ + D++ L D++ V+ + +++A+ +
Sbjct: 207 DE-RQKDKPKTDDLHFEGGIRDFLSEIADDERVLDDIIYMDDSVELDNKKRVEVEIAMTY 265
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ + + + N+I T +GGTH+ G + +LTR LN + K+ VKDKD S G VRE
Sbjct: 266 TI-SQREMVYSFVNNINTHEGGTHVSGYRTALTRVLNEISKQMGLVKDKDGSFQGSDVRE 324
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GL I+S+++P P+FEGQTKT+LGN E+ VV V L YLE HP +I+ K L
Sbjct: 325 GLVAILSIKIPEPQFEGQTKTKLGNSEITGVVSGIVGSSLKMYLEDHPKEASNIIEKILM 384
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+ KA AAK+AR+LV +KS L SLPGKLADCSS E EI+IVEGDSAGGSAKQGRD
Sbjct: 385 SKKAREAAKKARELVLRKSSLEVGSLPGKLADCSSKDASECEIYIVEGDSAGGSAKQGRD 444
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQAILPLRGKILNVE+ +N EI+ +I A G G G++ E LRYHKIII+T
Sbjct: 445 RRFQAILPLRGKILNVEKAGIGRALENAEIRAMITAFGAGF-GDEMDLEKLRYHKIIIMT 503
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV-K 474
DADVDGAHIRTL+LTFFYR+ + L +EG IY+ PPLYKV+ GKQ+QY Y D +L+ V K
Sbjct: 504 DADVDGAHIRTLMLTFFYRHLRELINEGHIYIAQPPLYKVQAGKQIQYVYSDEQLQSVTK 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
N Y IQR+KGLGEM P QLWETT++PE R L ++ +EDA A+ +F+ LMG +V
Sbjct: 564 VMDQENKRYGIQRYKGLGEMNPEQLWETTMDPEVRTLLKVSLEDATYADKMFNVLMGDKV 623
Query: 535 DTRKELIQNAANLV-NLD 551
+ R++ I+ A V NLD
Sbjct: 624 EPRRQFIEEHAQYVRNLD 641
>gi|167036441|ref|YP_001664019.1| DNA gyrase subunit B [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256751447|ref|ZP_05492325.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|320114866|ref|YP_004185025.1| DNA topoisomerase IV subunit B [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855275|gb|ABY93683.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749666|gb|EEU62692.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus
CCSD1]
gi|319927957|gb|ADV78642.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 633
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/552 (48%), Positives = 382/552 (69%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G Y Q+Y RG P T
Sbjct: 96 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVIVKQHGKIYRQRYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT I F PDK++F + FD++ +A R+RELAFLN + I L E
Sbjct: 154 DLEVIG----ETEETGTTITFKPDKEIFEETV-FDYDVLAQRLRELAFLNKGINIKLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++ +Q+ +D+Y
Sbjct: 209 -RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNSD-YEVEVCMQY-NDSY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD + +L GE VREGLT I
Sbjct: 263 TENIFSFANNIDTREGGTHLVGFKAALTKVINDYARKYGIIKDNEKNLQGEDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+ K+ A +A
Sbjct: 323 VSVKLKNPQFEGQTKTKLGNSEMRSIVENVVTEKLSAFLEENPSVAKVIVEKATQAARAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK GR+ RFQA
Sbjct: 383 EAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAKSGRNSRFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK++I+TDADVD
Sbjct: 443 ILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKVVIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL ++ +
Sbjct: 502 GSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDRELDRILNEIGRE 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 562 N-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMGDKVEPRREF 620
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 621 IEKHAKTVRNLD 632
>gi|268324621|emb|CBH38209.1| DNA gyrase subunit B [uncultured archaeon]
Length = 635
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/555 (47%), Positives = 378/555 (68%), Gaps = 16/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y V+GGLHGVG+SVVNALSE EV V R+G Y+Q+Y GK
Sbjct: 92 VVMTKLHAGGKF--DNKVYKVAGGLHGVGISVVNALSEWQEVEVLREGKRYYQRYEHGKA 149
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + ++ GTR+RF PD +F +FD + +A R+RELAFLN L+++L+
Sbjct: 150 VCEVKELSYTGENNGECGTRVRFKPDSTIFGV-YEFDAHLLATRLRELAFLNRGLSLSLK 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E S E+ + + GG+ +++++N +KK LH + F + D + + + LQ+ +D+Y
Sbjct: 209 DERSGEER----AFKYEGGITSFLEYINRNKKVLHSPITFEGEKDDVKVAIGLQY-NDSY 263
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + + N+++T++GG H+ G KA+LTR LN GK + +K ++L G+ VREGL +
Sbjct: 264 AENIFSFVNNVKTVEGGKHLSGFKAALTRVLNEYGKSNNMLKK--VNLDGDDVREGLAAV 321
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
IS+++ P+FEGQTKT+LGN EV+ +V+ V+E+L ++L+ +P D+I+ K+L A +A
Sbjct: 322 ISLKLREPQFEGQTKTKLGNSEVKGIVESFVREHLWDFLDENPKDGDAIIRKALEASRAR 381
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA+ AR++VR+K + SLPGKLADCS P + EI+IVEGDSAGGSAKQ RD+ FQA
Sbjct: 382 EAARHAREIVRKKDSF-ADSLPGKLADCSERDPAKKEIYIVEGDSAGGSAKQARDKNFQA 440
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + K+ EI+ LI ALG G+ G+DF E RY+KIII++DADVD
Sbjct: 441 ILPIRGKILNVEKARLDKILKSNEIRTLITALGAGI-GDDFDMEKARYNKIIIMSDADVD 499
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF--- 477
GAHIRTLLLTFFYRY + L IYV +PPLY V++GK+++Y + D E +
Sbjct: 500 GAHIRTLLLTFFYRYMQELVSANHIYVALPPLYMVKKGKEIRYAFSDDEYVNILDELNVK 559
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+A IQ +KGLGEM P QLWETT+NP R +K + +EDAAE + +F+ LMG V+ R
Sbjct: 560 EGDAGVKIQHYKGLGEMNPEQLWETTMNPATRGIKLVTLEDAAEVDWLFTVLMGEEVEPR 619
Query: 538 KELIQ-NAANLVNLD 551
+ IQ +A ++NLD
Sbjct: 620 RNFIQAHAKEVMNLD 634
>gi|344211462|ref|YP_004795782.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
gi|343782817|gb|AEM56794.1| DNA gyrase subunit B [Haloarcula hispanica ATCC 33960]
Length = 642
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/547 (48%), Positives = 369/547 (67%), Gaps = 15/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQW 175
D + + + GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 210 ---IDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQG 266
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +RE
Sbjct: 267 TDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTLKGDDIRE 325
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 326 GLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEAIVGKAVE 385
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR+
Sbjct: 386 AAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGRN 445
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY KII++T
Sbjct: 446 PDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRYEKIILMT 504
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE K+
Sbjct: 505 DADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDAERDKIIE 564
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V+
Sbjct: 565 EKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAVE 624
Query: 536 TRKELIQ 542
RKE I+
Sbjct: 625 PRKEFIK 631
>gi|427412749|ref|ZP_18902941.1| DNA gyrase, B subunit [Veillonella ratti ACS-216-V-Col6b]
gi|425715565|gb|EKU78551.1| DNA gyrase, B subunit [Veillonella ratti ACS-216-V-Col6b]
Length = 633
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/529 (49%), Positives = 363/529 (68%), Gaps = 12/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALSE V V +DG E + RG T L + S + GT + F
Sbjct: 114 LHGVGISVVNALSEWTVVKVRQDGKEQEISFERGHLRTPLKV----IGSANDTGTTVIFK 169
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F T + F+ N + R++ELAFLN L I L D PE++ + + GG+ +V
Sbjct: 170 PDAEIFETTV-FEFNVLCTRLQELAFLNKGLRITLT--DKRPEEDVVESFMYEGGIVSFV 226
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K ++ ++ D + +D+A Q+ +D+YS+ +L + N+I TIDGGTH+ G
Sbjct: 227 EFLNENKDLVNPTIIDVENTRDDVVVDVAFQY-NDSYSENLLSFVNNINTIDGGTHLSGF 285
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+++LTRTLN G+K+ +KD + +LSG+ VREGLT +ISV+V +P+FEGQTK +LGN EV
Sbjct: 286 RSALTRTLNDYGRKAGLIKDNESNLSGDDVREGLTAVISVKVLDPQFEGQTKAKLGNSEV 345
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+ + D V E L +LE HP I+ K+ +A +A AA++AR+L R+K+ L SSLPG
Sbjct: 346 KGITDTVVSEGLKTFLEEHPAEAKRIIDKATTANRAREAARKARELTRRKNALEVSSLPG 405
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCS P +EI++VEGDSAGGSAKQGRDRR+QAILPLRGKILNVE+ + N
Sbjct: 406 KLADCSEKDPLMTEIYLVEGDSAGGSAKQGRDRRYQAILPLRGKILNVEKARLDKILANN 465
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+++I A G G+ GEDF + RYHKIII+TDADVDGAHIRTLLLTFFYRY K L +EG
Sbjct: 466 EIRSMITAFGTGI-GEDFDLDKSRYHKIIIMTDADVDGAHIRTLLLTFFYRYMKPLIEEG 524
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLY++++GK Y Y DAE+ + + +IQR+KGLGEM P QLWETT
Sbjct: 525 RVYIAQPPLYQIKKGKGHWYVYSDAEMAAKLDEIGRDNI-TIQRYKGLGEMNPEQLWETT 583
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R + Q+ +ED+ EA+ +FS LMG +V+ R++ I++ A LV NLD
Sbjct: 584 MNPENRTILQVSLEDSIEADKIFSVLMGDKVEPRRKFIEDNAKLVRNLD 632
>gi|408491756|ref|YP_006868125.1| DNA gyrase subunit B GyrB [Psychroflexus torquis ATCC 700755]
gi|408469031|gb|AFU69375.1| DNA gyrase subunit B GyrB [Psychroflexus torquis ATCC 700755]
Length = 646
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/559 (44%), Positives = 378/559 (67%), Gaps = 18/559 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+SVVNALS L V++DG + Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSVVNALSVKLHARVFKDGKVWEQEYERGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ V P + +GT I F PD ++F +++F + T+A R+REL++LN + I++
Sbjct: 155 IYP----VKPTGDTEHKGTEITFKPDSEIFQESVEFKYETLAKRLRELSYLNKGIRISII 210
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWC 176
R+ + D E Q +E++ GL+E++++++ +++P+ DV+ + + I +++A+ +
Sbjct: 211 DKRQTNDDGEYRQ-DEFYSEEGLKEFIRFIDQNREPIITDVISMESEKNNIPVEVAMVY- 268
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+++YS+ + Y N+I T +GGTH+ G + LT TL S + ++G+ REG
Sbjct: 269 NNSYSENLHSYVNNINTHEGGTHLSGFRRGLTATLKKYADNSGLLDKLKFEITGDDFREG 328
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT I+SV+V NP+FEGQTKT+LGN E+ V Q+V E L YLE +P+ +I+ K + A
Sbjct: 329 LTAIVSVKVANPQFEGQTKTKLGNRELTSAVSQAVTEMLEIYLEENPNDAKTIVQKVMLA 388
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+AR++V++K+V+ LPGKL+DCS PE E+F+VEGDSAGG+AKQGRDR
Sbjct: 389 AQARHAAKKAREMVQRKTVMSGGGLPGKLSDCSEQDPEACEVFLVEGDSAGGTAKQGRDR 448
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKII 412
+FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHK+I
Sbjct: 449 KFQAILPLRGKILNVEKAMQHRVFENEEIKNIYTALGVTIGTEEDSKALNLSKLRYHKVI 508
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+ DADVDG+HI TL+LTFF+RY K L + IY+ PPLY +++G + +Y +++ E +
Sbjct: 509 IMCDADVDGSHIATLILTFFFRYMKELIEASHIYIATPPLYLIKKGSKKRYAWNEKERNE 568
Query: 473 VKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGA 532
+ + + ++ S+QR+KGLGEM +QLW+TT+NPE R+L+++ I D AEA+ +FS LMG
Sbjct: 569 IVNEYKTSV--SVQRYKGLGEMNAIQLWDTTMNPENRILRRVTIVDMAEADRIFSMLMGD 626
Query: 533 RVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 627 EVPPRREFIEQNAVYANID 645
>gi|319952084|ref|YP_004163351.1| DNA gyrase subunit b [Cellulophaga algicola DSM 14237]
gi|319420744|gb|ADV47853.1| DNA gyrase subunit B [Cellulophaga algicola DSM 14237]
Length = 653
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/560 (44%), Positives = 375/560 (66%), Gaps = 18/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+R+G Y Q+Y +GK
Sbjct: 102 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSKDLKATVFRNGTIYEQEYQKGKA 159
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ V + + +GT + F+PD+ +FT ++F+++T+A R+REL++LN ++I +
Sbjct: 160 LYP----VKSIGETEIRGTEVTFYPDETIFTQTVEFNYDTLANRMRELSYLNKGVSITMT 215
Query: 120 --RKEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQW 175
R++D D + E F++ GL+E++++L+ +++PL V+ + +GI +++A+ +
Sbjct: 216 DKRQKDKDTPSGFHEERFYSEEGLKEFIKFLDGNREPLIKGVISMEGEKNGIPVEVAMVY 275
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ +Y++ + Y N+I T +GGTH+ G + LT TL S ++ + G+ RE
Sbjct: 276 NT-SYTENLHSYVNNINTHEGGTHLSGFRRGLTSTLKKYADASGMLEKLKFEIQGDDFRE 334
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT IISV+V P+FEGQTKT+LGN EV V Q+V E L++YLE +P+ I+ K +
Sbjct: 335 GLTAIISVKVGEPQFEGQTKTKLGNREVSAAVSQAVSEMLSDYLEENPEDAKIIVQKVVL 394
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A A AA +AR++V++K+V+ LPGKL+DCS P E+F+VEGDSAGG+AKQGRD
Sbjct: 395 AATARHAATKAREMVQRKTVMSIGGLPGKLSDCSDQDPVNCEVFLVEGDSAGGTAKQGRD 454
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKEALRYHKI 411
R FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ E LRYHK+
Sbjct: 455 RMFQAILPLRGKILNVEKAMRHRVFENEEIKNIYTALGVSIGTEEDSQALNLEKLRYHKV 514
Query: 412 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELK 471
+I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G + +Y ++D E
Sbjct: 515 VIMCDADVDGSHIETLILTFFFRYMRELVEAGHVYIATPPLYLVKKGAKKRYAWNDKERD 574
Query: 472 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
++ SF N IQR+KGLGEM QLW+TT+NPE R L+Q+VIE+A E + VFS LMG
Sbjct: 575 EIAESF--NGSVGIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVVIENATETDRVFSMLMG 632
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 DEVPPRREFIEKNAVYANID 652
>gi|317504159|ref|ZP_07962158.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
gi|315664735|gb|EFV04403.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae
DSM 15606]
Length = 656
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/567 (46%), Positives = 374/567 (65%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V ++GTR +FWPD +FTT + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETTKRGTRQQFWPDPTIFTTTT-YKWDIVASRMRELAYLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
D E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DMRHDEEGKIRQEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +K ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKAYADAEPTIAKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPIEAKKICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P+E EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIATPPLYKCTYKKVSEYCYTEQQ 569
Query: 470 L-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
K V L++ QR+KGLGEM P QLWETT++P+ R+LKQ+ I++AAEA+
Sbjct: 570 RQAFIDKYVDGKEDDKGLHT-QRYKGLGEMNPEQLWETTMDPKSRLLKQVTIQNAAEADE 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVEPRREFIEQNATYANID 655
>gi|150003955|ref|YP_001298699.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|294775119|ref|ZP_06740648.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|319639808|ref|ZP_07994538.1| B subunit [Bacteroides sp. 3_1_40A]
gi|345518957|ref|ZP_08798390.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|423312902|ref|ZP_17290838.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
gi|149932379|gb|ABR39077.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482]
gi|254833591|gb|EET13900.1| DNA gyrase, B subunit [Bacteroides sp. 4_3_47FAA]
gi|294451163|gb|EFG19634.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510]
gi|317388625|gb|EFV69474.1| B subunit [Bacteroides sp. 3_1_40A]
gi|392686933|gb|EIY80232.1| DNA gyrase, B subunit [Bacteroides vulgatus CL09T03C04]
Length = 654
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/564 (46%), Positives = 366/564 (64%), Gaps = 23/564 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q+YS G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRGGKIYQQEYSCGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ + V V + D GT+ FWPD +FT T +FD + R+RELA+LN +TI+L
Sbjct: 158 LYS----VKEVGTADITGTKQTFWPDDTIFTVTEYKFD--ILQARMRELAYLNKGITISL 211
Query: 120 RKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWC 176
E + + F G++E+V++LN + + L +DV+ + + I+ A+ +
Sbjct: 212 TDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNRNNEALINDVIYLNTEKNNTPIECAIMY- 270
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ Y +++ Y N+I TI+GGTH G +++LTR L + +K ++ + +SGE REG
Sbjct: 271 NTGYRESLHSYVNNINTIEGGTHEAGFRSALTRVLKKYAEDTKALEKAKVEISGEDFREG 330
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
L +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+ K + A
Sbjct: 331 LIAVISVKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTYYLEEHPKEAKQIVDKVILA 390
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
A +AA++AR+ V++KS + LPGKLADCSS PEE E+F+VEGDSAGGSAKQGR R
Sbjct: 391 ATARIAARKARESVQRKSPMGGGGLPGKLADCSSRNPEECELFLVEGDSAGGSAKQGRSR 450
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKEA----LRYHK 410
FQAILPLRGKILNVE+ ++++E+ N+I ALG+ GV G D K+A LRYHK
Sbjct: 451 AFQAILPLRGKILNVEKAMWHKAFESDEVNNIITALGVRFGVDGNDDSKKANIDKLRYHK 510
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+TDADVDG+HI TL++T FYRY + + G +Y+ PPLYK +GK +YCY +
Sbjct: 511 VVIMTDADVDGSHIDTLIMTLFYRYMPEIIENGHLYIANPPLYKCSKGKISEYCYTEEAR 570
Query: 471 KKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
+ + N +++ QR+KGLGEM P QLWETT+NPE R+LKQ+ I++AA + +FS
Sbjct: 571 QAFIQKYGDGQENGIHT-QRYKGLGEMNPEQLWETTMNPETRILKQVTIDNAANVDYIFS 629
Query: 528 SLMGARVDTRKELIQNAANLVNLD 551
LMG V R+E I+ A N+D
Sbjct: 630 MLMGDDVAPRREFIEKNATYANID 653
>gi|206895598|ref|YP_002246982.1| DNA gyrase B subunit [Coprothermobacter proteolyticus DSM 5265]
gi|206738215|gb|ACI17293.1| DNA gyrase, B subunit [Coprothermobacter proteolyticus DSM 5265]
Length = 637
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 366/554 (66%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKFGG + Y SGGLHGVGLSVVNALSE LE+TV RDG Y Q+Y GKP
Sbjct: 97 VVLTKLHAGGKFGGQA--YKASGGLHGVGLSVVNALSEWLEITVKRDGTVYWQRYEFGKP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + + D + T ++F PDK +F +FD+ I R+RELAFLN ++TI L+
Sbjct: 155 VTEVK-EIGQYDDTESSATIVQFKPDKSIFADT-RFDYEVIRQRLRELAFLNSEVTIELQ 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
+E S+PE + F GL ++ + + + DV+ F + +++A + D +
Sbjct: 213 REGSEPEF-----FHFESGLAGLLEEVANSSEKIIDVLRFSGAQQDVQVEVAFTYVDD-F 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ ++ + NS+RT+DGGTH++G+++++++TL +G++ +KD ++S + R+GL +
Sbjct: 267 DENIVSFVNSVRTVDGGTHVQGLRSAISKTLAEVGRRKGLLKDNNVS--SDDFRQGLRAV 324
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
++VRVP PEFEGQTK +LG+ VR +V+ V + YLE DV +++ ++L++ +
Sbjct: 325 VAVRVPEPEFEGQTKGKLGSKYVRNIVEDVVSKAFESYLETQNDVTKTLIQRALASAEMR 384
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
KR R++++ + + S+ LPGKL+DCSS E+ E+ IVEG+SAGGSAKQGRDR QA
Sbjct: 385 ETFKRTREMMKNRLRVESTVLPGKLSDCSSRDVEKRELLIVEGESAGGSAKQGRDRTIQA 444
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKILNVE+ + NEEIQ LI A+G GV GE F LRY KIII+TDADVD
Sbjct: 445 VLPLRGKILNVEKASWKRVLDNEEIQALIAAIGTGV-GEHFNFAKLRYGKIIIMTDADVD 503
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVER--GKQVQYCYDDAELKKVKSSFP 478
GAHIRTLLLTFF+R + L +EG IY+ PPLYK+ER K + Y Y D +L+
Sbjct: 504 GAHIRTLLLTFFFRMMRPLVEEGHIYIAQPPLYKIERKKSKDIIYLYSDEDLQAFLREHE 563
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLWETTLNPE R L + +EDA +A+ +FS LMG +V RK
Sbjct: 564 GEN-FEIQRYKGLGEMNAEQLWETTLNPETRNLYMVTVEDAEKADELFSVLMGEKVQPRK 622
Query: 539 ELIQNAANLV-NLD 551
E I ANLV NLD
Sbjct: 623 EFIFANANLVKNLD 636
>gi|448649276|ref|ZP_21679989.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
gi|445773920|gb|EMA24949.1| DNA gyrase subunit B [Haloarcula californiae ATCC 33799]
Length = 642
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/548 (48%), Positives = 370/548 (67%), Gaps = 17/548 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + + GT +RFWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLKPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISI- 209
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQ 174
D E++ E F + GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 210 ----DDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQ 265
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +R
Sbjct: 266 GTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVINDYATDNNLLKDLDDTLKGDDIR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 325 EGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEAIVGKAV 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR
Sbjct: 385 EAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY KII++
Sbjct: 445 NPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRYEKIILM 503
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE +
Sbjct: 504 TDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDAERDTII 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V
Sbjct: 564 EEKCDGNPTQVQRFKGLGEMNPDQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAV 623
Query: 535 DTRKELIQ 542
+ RKE I+
Sbjct: 624 EPRKEFIK 631
>gi|448667078|ref|ZP_21685679.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
gi|445770600|gb|EMA21659.1| DNA gyrase subunit B [Haloarcula amylolytica JCM 13557]
Length = 642
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/547 (48%), Positives = 369/547 (67%), Gaps = 15/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V ++ + GT +RFWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLEPDEETGTTVRFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISI- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQW 175
D + + + GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 210 ---IDERDGETETFAYDGGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQG 266
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +RE
Sbjct: 267 TDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTLKGDDIRE 325
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD ++I+ K++
Sbjct: 326 GLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEAIVGKAVE 385
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR+
Sbjct: 386 AAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGRN 445
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F + LRY KII++T
Sbjct: 446 PDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIDDLRYEKIILMT 504
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE K+
Sbjct: 505 DADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGDTYDAMTDAERDKIIE 564
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V+
Sbjct: 565 EKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAVE 624
Query: 536 TRKELIQ 542
RKE I+
Sbjct: 625 PRKEFIK 631
>gi|363894897|ref|ZP_09321945.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
gi|361961139|gb|EHL14363.1| DNA gyrase, B subunit [Eubacteriaceae bacterium ACC19a]
Length = 641
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/556 (47%), Positives = 380/556 (68%), Gaps = 20/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V +DG Y Q++ G V
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKDGKVYKQEFEYGNAV 156
Query: 62 TTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
T + TC + + GT I F PD+++F + + T+ R+RELAFLN ++I
Sbjct: 157 TDIKQIGTCPL------EETGTCISFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISI 209
Query: 118 ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWC 176
L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG I++A+Q+
Sbjct: 210 TL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY- 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD + +GE +REG
Sbjct: 267 TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENFTGEDIREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P I+ K + +
Sbjct: 327 LTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRS 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGGSAK+GR+
Sbjct: 387 QRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNS 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+ QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRYHKIII++D
Sbjct: 447 QNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSD 505
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y EL++ +
Sbjct: 506 ADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSPEELEQKLNE 565
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ +FS LMG +V+
Sbjct: 566 IGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADEIFSVLMGDKVEP 624
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 625 RRDFIQQNARYVENLD 640
>gi|448391972|ref|ZP_21567067.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
gi|445665384|gb|ELZ18062.1| DNA gyrase subunit B [Haloterrigena salina JCM 13891]
Length = 644
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/549 (47%), Positives = 370/549 (67%), Gaps = 10/549 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVKRDGSVFRHAFEEGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V + V ++ + GT+IRFWPD +F +F +T++ R+RELAFLN + I L
Sbjct: 152 VGDME-RVRDMEEDEETGTQIRFWPDTGIFE-GDEFSFSTLSNRLRELAFLNSGVRITLS 209
Query: 120 --RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWC 176
R E D + Y + GG+ E+V++LN + +HD V+ F + I +++A+Q
Sbjct: 210 DERTELHDEDAPVEETYEYQGGIREFVEYLNETRSAMHDDVIYFEAEEQNIQVEVAMQ-A 268
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
++ ++ +AN+I T +GGTH+ G K +LTRT+N K + + D + +L GE +REG
Sbjct: 269 TEELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAKDNDMLGDLEDNLKGEDIREG 328
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+ P+P+FEGQTKT+LGN EVR +V+ S+ E L Y E HPD +I++K++ A
Sbjct: 329 LTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESSMHEGLGTYFEEHPDTAQAIVTKAVEA 388
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNP 448
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TD
Sbjct: 449 DFQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMATD 507
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYR+ + L + G +Y PPLY++ + + E ++ +
Sbjct: 508 ADVDGAHIRTLLLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTEQERDEIVAE 567
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLW+TT++P+ R+LKQ+ IEDAA A+ +FS LMG V+
Sbjct: 568 KCDGNPSQVQRFKGLGEMNPQQLWDTTMDPDNRILKQITIEDAAAADKMFSVLMGDAVEP 627
Query: 537 RKELIQNAA 545
RK+ I++ A
Sbjct: 628 RKQFIKDNA 636
>gi|269925173|ref|YP_003321796.1| DNA gyrase subunit B [Thermobaculum terrenum ATCC BAA-798]
gi|269788833|gb|ACZ40974.1| DNA gyrase, B subunit [Thermobaculum terrenum ATCC BAA-798]
Length = 640
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/554 (48%), Positives = 371/554 (66%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFG S GY VSGGLHGVG SVVNALSE L V R+G + Q Y RG P
Sbjct: 99 VVMTVLHAGGKFG--SGGYKVSGGLHGVGASVVNALSEYLIAEVHREGKIWRQSYERGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + DR GT I F PD +F+T +++ +T+A R RE+A+LN L I
Sbjct: 157 KTPVEA----IGDTDRTGTIITFKPDADLFST-LEYQFDTLAQRFREIAYLNKGLKITFI 211
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
+ D E Y F GG+ +V+ LN ++ L + + K ++GI +++A+Q+ +D
Sbjct: 212 DDRDDKELTLY----FEGGIASFVRHLNKNRNVLTEKPIYIHKQLNGIDVEVAIQY-TDG 266
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+++++ + N+I T+DGGTH+ G + +LTRTLN K+ +KD D L+GE VREGLT
Sbjct: 267 FNESLHTFTNNINTVDGGTHLTGFRTALTRTLNDYAVKNGLLKDSDTKLTGEDVREGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++P+P+FEGQTK++LG+ E +VV V++ L Y + +P I+ K+++A +A
Sbjct: 327 VVSVKLPDPQFEGQTKSKLGSSEAERVVASVVRDGLLSYFDENPSDAKRIIEKAITAARA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDLV +K L +LPGKLADCS P SE++IVEGDSAGGSAKQGRDRRFQ
Sbjct: 387 REAARKARDLVVRKGALDGMTLPGKLADCSERDPRHSELYIVEGDSAGGSAKQGRDRRFQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ M + EI+ LI ALG G+ G+ F LRYH+I ++TDADV
Sbjct: 447 AILPLRGKILNVEKARLDKMLSSAEIKALITALGTGI-GDSFDISKLRYHRIFLMTDADV 505
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+R+ + G +Y+ +PPLYK++ GK+ + Y D E +V +
Sbjct: 506 DGAHIRTLLLTFFFRHMPDIIKNGHLYIAMPPLYKIQVGKEKYFVYSDEERDRVLAGLNG 565
Query: 480 NALYS-IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N + IQR+KGLGEM P QLWETT++P R + Q+ IEDA +A+ +F LMG+ V RK
Sbjct: 566 NRSKAIIQRYKGLGEMNPEQLWETTMDPSTRTIMQVTIEDAVKADELFDMLMGSNVAPRK 625
Query: 539 ELIQNAANLV-NLD 551
+ IQ+ A V NLD
Sbjct: 626 KFIQSHAKSVRNLD 639
>gi|298207945|ref|YP_003716124.1| DNA gyrase subunit B [Croceibacter atlanticus HTCC2559]
gi|83850586|gb|EAP88454.1| DNA gyrase subunit B [Croceibacter atlanticus HTCC2559]
Length = 645
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/558 (45%), Positives = 374/558 (67%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ +V +DG + Q+Y RGKP
Sbjct: 96 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKASVHKDGKIWEQEYERGKP 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V D GT + F PD Q+F I++++ T+A R+RELAFLN LTI L
Sbjct: 154 LYP----VKAVGDTDFSGTVVTFHPDNQIFQQTIEYNYETLASRMRELAFLNKGLTITLT 209
Query: 121 KEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ +K ++ +E FF+ GL E+V++L+ ++ P+ DV+ + +G+ +++A+ + S
Sbjct: 210 DKRQTDDKGEFISERFFSEEGLSEFVRFLDGNRDPIIKDVISMEGEKNGVPVEVAMIYNS 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I T +GGTH+ G + LT +L S + ++G+ REGL
Sbjct: 270 -SYAENLHSYVNNINTHEGGTHLAGFRRGLTSSLKKFADASGMLDKLKFDIAGDDFREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V E + ++E +P+ +I+ K + A
Sbjct: 329 TAIISVKVSEPQFEGQTKTKLGNREVTSAVSQAVSEMIEIHMEENPNDAKTIIEKVILAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++V++K+V+ LPGKL+DCS+ P E E+F+VEGDSAGG+AKQGRDR
Sbjct: 389 QARHAAKKAREMVQRKTVMSIGGLPGKLSDCSNQDPAECEVFLVEGDSAGGTAKQGRDRA 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K LRYHKI+I
Sbjct: 449 FQAILPLRGKILNVEKAMSHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYHKIVI 508
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+RY K L + G IY+ PPLY +++G++ +Y +++ E + +
Sbjct: 509 MCDADVDGSHIATLILTFFFRYMKELIEAGHIYIATPPLYLIKKGQKKRYAWNEDEREAI 568
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ F + S+QR+KGLGEM QLW+TT+NPE R L+Q+ I++ EA+ +FS LMG
Sbjct: 569 ANEFKGSV--SVQRYKGLGEMNAEQLWDTTMNPEFRTLRQVAIDNGVEADRIFSMLMGDD 626
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 627 VPPRREFIEKNAKYANID 644
>gi|281421058|ref|ZP_06252057.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
gi|281404976|gb|EFB35656.1| DNA gyrase, B subunit [Prevotella copri DSM 18205]
Length = 656
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/567 (46%), Positives = 374/567 (65%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFRGGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V +++GTR +FWPD +FT + + + IA R+RELAFLN + I LR
Sbjct: 156 LYPVKV----VGETNKRGTRQQFWPDPTIFTHTV-YKWDIIANRMRELAFLNAGIKITLR 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
D E + F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPDEEGKTKEQVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEIAVMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G + +LTRTL + + SK ++ + ++ E R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRMALTRTLKAYAEADPTISKQIEKAKVEIAPEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV+ V Q+V E L++YLE HPD I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVQGAVQQAVNEALSDYLEEHPDEAKRICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+ + LPGKLADCS P+E EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNFMTGGGLPGKLADCSMKDPKECEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED K+ + LRY
Sbjct: 450 DRFRQAILPLRGKILNVEKVQWHKVFEAESVMNIIQSIGVRFGVDGEDSKEANTDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK R K +YCY +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEEGHLYIATPPLYKCTYRSKVSEYCYTEQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A + K +++ QR+KGLGEM P QLWETT++P R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFIDKYGDGVEDKNIHT-QRYKGLGEMNPEQLWETTMDPSTRLLKQVTIENAAQADE 628
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 629 IFSMLMGDDVEPRREFIEQNATYANID 655
>gi|15672887|ref|NP_267061.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|385830443|ref|YP_005868256.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|418038398|ref|ZP_12676730.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723837|gb|AAK05003.1|AE006324_6 DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403]
gi|326406451|gb|ADZ63522.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56]
gi|354693409|gb|EHE93178.1| DNA topoisomerase (ATP-hydrolyzing) [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672965|dbj|BAL50856.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis IO-1]
Length = 651
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/534 (46%), Positives = 366/534 (68%), Gaps = 14/534 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+VTV +DG +Y+Q+Y RG L + DR+GT + F
Sbjct: 124 LHGVGSSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKI----IGETDRRGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV
Sbjct: 180 PDPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYV 238
Query: 145 QWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G
Sbjct: 239 EYLNENKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGF 297
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+ +LTR +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV
Sbjct: 298 RTALTRVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEV 357
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+V++ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPG
Sbjct: 358 TGIVNKLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPG 417
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NE
Sbjct: 418 KLADCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANE 477
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 478 EIRSLFTAMGTGF-GADYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 536
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPV 497
+Y+ PP+Y ++ G + + E L++ + + ++QR+KGLGEM
Sbjct: 537 YVYIAQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDH 596
Query: 498 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
QLW+TT++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 597 QLWDTTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|254495273|ref|ZP_05108197.1| DNA gyrase subunit B [Polaribacter sp. MED152]
gi|85819627|gb|EAQ40784.1| DNA gyrase subunit B [Polaribacter sp. MED152]
Length = 645
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/561 (45%), Positives = 375/561 (66%), Gaps = 22/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGK- 59
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV ++G + Q+Y RGK
Sbjct: 96 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLTATVHKEGKIWQQEYERGKT 153
Query: 60 --PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
PV T + D GT + F PDK +FT + ++++ T+A R+RELA+LN +TI
Sbjct: 154 LYPVKT-------IGDTDFTGTIVTFLPDKSIFTQSTEYNYETLATRMRELAYLNKGITI 206
Query: 118 ALR-KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
L K + D E N +E F + GL E++++L++ ++ L +V+ + +GI +++A+
Sbjct: 207 TLTDKRNKDDEGNFISETFHSNKGLPEFIEYLDSTREQLIANVISMEGEKNGIPVEVAMV 266
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ + +Y++ + Y N+I T +GGTH+ G + LT TL +S +K+ ++G+ R
Sbjct: 267 YNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTGTLKKYADESGLLKNVKFDIAGDDFR 325
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE +P+ +I+ K +
Sbjct: 326 EGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLTDYLEENPNDAKTIVQKVI 385
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A AA++ARD+V++KSV+ LPGKL+DCS T P + EIF+VEGDSAGG+AKQGR
Sbjct: 386 LAATARHAARKARDMVQRKSVMSIGGLPGKLSDCSETDPAQCEIFLVEGDSAGGTAKQGR 445
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKEALRYHK 410
DR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ +RYHK
Sbjct: 446 DRNFQAILPLRGKILNVEKAMQHKVFENEEIKNMFTALGVSIGTEEDPRALNLSKIRYHK 505
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+ DADVDG+HI TL+LTFF+RY K + ++G IY+ PPLY V++G++ QY +DD +
Sbjct: 506 VVIMCDADVDGSHIATLILTFFFRYMKEMVEQGYIYIATPPLYLVKKGQKRQYAWDDDQR 565
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ + +IQR+KGLGEM QLW+TT+NPE R L+++VI+ EA+ VFS LM
Sbjct: 566 DLIAQQMGGSV--TIQRYKGLGEMNAEQLWDTTMNPEFRTLRKVVIDSPTEADRVFSMLM 623
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R++ I+ A N+D
Sbjct: 624 GDEVPPRRDFIERNAKYANID 644
>gi|326390355|ref|ZP_08211914.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392940031|ref|ZP_10305675.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
gi|325993632|gb|EGD52065.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW
200]
gi|392291781|gb|EIW00225.1| DNA topoisomerase IV, B subunit, Gram-positive/DNA gyrase, B
subunit [Thermoanaerobacter siderophilus SR4]
Length = 633
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 378/552 (68%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G Y Q Y RG P T
Sbjct: 96 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVIVKQHGKIYRQIYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT I F PDK++F + FD++ +A R+RELAFLN + I L E
Sbjct: 154 DLEVIG----ETEETGTTITFKPDKEIFEETV-FDYDVLAQRLRELAFLNKGINIKLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
E+ + + GG+ +V++LN +K+ LH+ + K+ D +++ +Q+ +D+Y
Sbjct: 209 RHGKEE----VFNYEGGIISFVKYLNRNKEVLHEEPIYMEAKNSD-YEVEVCMQY-NDSY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G KA+LT+ +N +K +KD + +L GE VREGLT I
Sbjct: 263 NENIFSFANNIDTREGGTHLVGFKAALTKVINDYARKYGIIKDNEKNLQGEDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+ K+ A +A
Sbjct: 323 VSVKLKNPQFEGQTKTKLGNSEMRSIVENVVTEKLSAFLEENPSVAKVIVEKATQAARAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK GR+ RFQA
Sbjct: 383 EAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAKSGRNSRFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+ +I ALG GV G DF LRYHKI+I+TDADVD
Sbjct: 443 ILPLRGKILNVEKARLDKILSNEEIRAMITALGTGV-GNDFDISKLRYHKIVIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYR+ + L + G +++ PPLYK+ +GK+V Y Y D EL K+ +
Sbjct: 502 GSHIRTLLLTFFYRFMRPLIENGNVFIAQPPLYKITKGKKVYYAYSDRELDKILNEIGRE 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 562 N-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMGDKVEPRREF 620
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 621 IEKYAKTVRNLD 632
>gi|441497053|ref|ZP_20979274.1| DNA gyrase subunit B [Fulvivirga imtechensis AK7]
gi|441439184|gb|ELR72507.1| DNA gyrase subunit B [Fulvivirga imtechensis AK7]
Length = 651
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/561 (46%), Positives = 370/561 (65%), Gaps = 18/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L V R+G Y Q+Y G P
Sbjct: 98 VVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTDLRAEVHRNGKIYEQEYKIGVP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D+ GT I F PD +F ++ + T+A R+RELA+LN + I L+
Sbjct: 156 QYS----VREIGDTDKTGTTITFQPDSSIFNVT-EYTYETVASRLRELAYLNAGIRIHLK 210
Query: 121 KEDSDPE--KNQYNEYFFAGGLEEYVQWLN-TDKKPLHDVVGFRKDVDGITIDLALQWCS 177
+ K + +++F GGL+E+VQ+L+ T +K + + + + + +A+ + +
Sbjct: 211 DLRDLDDDGKPKSDDFFSEGGLKEFVQYLDSTREKLIPEPIYMDSEKGENPVQVAMSYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+YS+ ++ Y N+I TI+GGTH+ G + +LTRTL + KS + + +SG+ REGL
Sbjct: 271 -SYSENVVSYVNNINTIEGGTHVAGFRRALTRTLKAYADKSGLLDKVKVEISGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN +V VD V E L YLE +P SI+ K + A
Sbjct: 330 TAVISVKVAEPQFEGQTKTKLGNSDVSGSVDTVVGEMLNNYLEENPKEAKSIVQKVIIAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+VL + LPGKLADCS+ P SE+++VEGDSAGGSAKQGRDR
Sbjct: 390 QARHAARKAREMVQRKNVLSGTGLPGKLADCSNNDPTISELYLVEGDSAGGSAKQGRDRN 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----ALRYHKIII 413
FQAILPLRGKILNVE+ E +Y+NEEI+N+I ALG+ E+ +K LRYHKIII
Sbjct: 450 FQAILPLRGKILNVEKAQEHKIYENEEIKNMITALGVSFGTEEDEKALNMTKLRYHKIII 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HIRTL+LTFF+RY L ++G +Y+ +PPLY+++RG+ +YC+ + E K+
Sbjct: 510 MTDADVDGSHIRTLILTFFFRYMHALIEKGYVYIALPPLYQLKRGRDERYCWTEEERMKL 569
Query: 474 KSSFPSNA---LYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+QR+KGLGEM P QLW TT++PE R LK++ IE AAEA+ +FS LM
Sbjct: 570 IKEMAGEGKEESVGVQRYKGLGEMNPEQLWTTTMDPENRSLKRVTIESAAEADHLFSMLM 629
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A +D
Sbjct: 630 GDEVAPRREFIERNAKYAKVD 650
>gi|448678345|ref|ZP_21689352.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
gi|445772332|gb|EMA23377.1| DNA gyrase subunit B [Haloarcula argentinensis DSM 12282]
Length = 642
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/548 (48%), Positives = 370/548 (67%), Gaps = 17/548 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF S Y VSGGLHGVG+SVVNALS+ LEV V RDG + Q++ GKP
Sbjct: 95 VVMTILHAGGKFDNKS--YQVSGGLHGVGVSVVNALSKWLEVEVRRDGALWKQRFDHGKP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V ++ + GT ++FWPD ++F T +F +T++ R+RELAFLN + I++
Sbjct: 153 EYDLK-KVRDLEPDEETGTTVQFWPDDEIFETG-EFKFSTLSSRLRELAFLNSGVAISIH 210
Query: 121 KE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVD----GITIDLALQ 174
E D + E Y+ GG+ E+V++LN K PLH D++ F + + + +++A+Q
Sbjct: 211 DERDGETETFAYD-----GGIREFVEYLNETKDPLHRDIIYFEDEEEIAEGPVQVEIAMQ 265
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
D ++ +AN+I T +GGTH+ G K SLTR +N + +KD D +L G+ +R
Sbjct: 266 GTDDLQG-SIHAFANNINTREGGTHLTGFKTSLTRVVNDYATDNNLLKDLDDTLKGDDIR 324
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +ISV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L + E +PD + I+ K++
Sbjct: 325 EGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESAMHDGLATFFEENPDTAEVIVGKAV 384
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A KA AA++A +L R+KS L S++LPGKLADC + PEE+E+FI EGDSAGGSAKQGR
Sbjct: 385 EAAKARKAAQKAEELTRRKSALDSTALPGKLADCQTRDPEEAELFIAEGDSAGGSAKQGR 444
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+ FQAILP++GKILNVE+ + +N EI+NLI ALG G+ G++F E LRY KII++
Sbjct: 445 NPDFQAILPIKGKILNVEKHRLDRILENNEIRNLITALGTGI-GDEFDIEDLRYEKIILM 503
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLT FYR+ K L + G +Y PPLY++ DAE K+
Sbjct: 504 TDADVDGAHIRTLLLTLFYRHMKPLLEAGYVYASQPPLYRIRYRGNTYDAMTDAERDKII 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+QRFKGLGEM P QLWETT+NP+ R+LKQ+ IEDAA A+ +F+ LMG V
Sbjct: 564 EEKCDGNPTHVQRFKGLGEMNPEQLWETTMNPDNRILKQITIEDAAAADKMFNILMGDAV 623
Query: 535 DTRKELIQ 542
+ RKE I+
Sbjct: 624 EPRKEFIK 631
>gi|329964535|ref|ZP_08301589.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
gi|328524935|gb|EGF51987.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057]
Length = 657
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/571 (46%), Positives = 374/571 (65%), Gaps = 34/571 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS+ + V+R+G Y Q+Y GKP
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSKHMTTQVFRNGKIYQQEYECGKP 157
Query: 61 VTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 116
+ + TC GT+ FWPD +FT + ++ + T+ R+RELA+LN +T
Sbjct: 158 LYAVKEVGTC------DPGFSGTKQTFWPDDSIFTVS-EYKYTTLQARLRELAYLNKGIT 210
Query: 117 IAL-----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITID 170
I L + E+ +P Q ++ G++E+V++LN++ PL D V+ + G+ I+
Sbjct: 211 ITLTDLRSKDEEGNP---QVEKFHSEEGVKEFVRYLNSNNNPLFDDVIYLNTEKAGVPIE 267
Query: 171 LALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS--KTVKDKDISL 228
A+ + + Y + + Y N+I T +GGTH G +A+LTR L G+ + K ++ + +
Sbjct: 268 CAIMY-NTGYRENLHSYVNNINTKEGGTHEGGFRAALTRVLKKYGEDTCAKQLEKAKVEI 326
Query: 229 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 288
SGE REGL +ISV+V P+FEGQTKT+LGN EV V+Q+V E L+ YLE HP
Sbjct: 327 SGEDFREGLIAVISVKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALSYYLEEHPKEAKL 386
Query: 289 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 348
I+ K + A A +AA++AR+ V++KS + +PGKLADCSS PEE E+F+VEGDSAGG
Sbjct: 387 IVEKVILAATARVAARKARESVQRKSPMSGGGMPGKLADCSSKDPEECELFLVEGDSAGG 446
Query: 349 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK--- 403
SAKQGR+R FQAILPLRGKILNVE+ ++++E+ N+I+ALG+ GV ED K+
Sbjct: 447 SAKQGRNRAFQAILPLRGKILNVEKAMWHKAFESDEVNNIIQALGIRFGVDSEDSKEANI 506
Query: 404 EALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQY 463
+ LRY K+II+TDADVDG+HI TL++T F+RY + G +Y+ PPLY +GK +Y
Sbjct: 507 DKLRYKKVIIMTDADVDGSHIDTLIMTLFFRYFPQVIQNGYLYIATPPLYLCSKGKVKEY 566
Query: 464 CYDDAELKKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAA 520
C+ D + +K ++ NA+++ QR+KGLGEM P QLWETT+NPE RMLKQ+ +E AA
Sbjct: 567 CWTDQQRQKFIDTYGGGSENAIHT-QRYKGLGEMNPEQLWETTMNPENRMLKQVHLESAA 625
Query: 521 EANVVFSSLMGARVDTRKELIQNAANLVNLD 551
EA+ VFS LMG V R++ I+ A N+D
Sbjct: 626 EADYVFSMLMGEDVGPRRDFIEANATYANID 656
>gi|374597859|ref|ZP_09670861.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|423323806|ref|ZP_17301648.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
gi|373909329|gb|EHQ41178.1| DNA gyrase subunit B [Myroides odoratus DSM 2801]
gi|404609024|gb|EKB08449.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 103059]
Length = 646
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/558 (45%), Positives = 373/558 (66%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+RDG Y Q+YS+GK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLRATVYRDGKIYEQEYSKGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D++GT + F PD +FT +++ ++T+A R+RELAFLN LTI L
Sbjct: 155 LFPVKV----IGETDKRGTTVMFKPDPTIFTQTLEYSYDTLASRLRELAFLNKGLTITLT 210
Query: 121 -KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ D + Q +E FF+ GL+E++++L+ ++ P+ ++V+ D + +++AL + +
Sbjct: 211 DAREVDEKGQQKSEVFFSKEGLKEFIKFLDGNRTPIINEVIWMESDKGDVPVEVALVY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D YS+ + Y N+I T +GGTH++G + LTRTL S + +SG+ REGL
Sbjct: 270 DTYSENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGLLDKLKFEISGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ I+ K + A
Sbjct: 330 TAIISVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEENPNDAKIIVQKVILAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+AKQGRDR
Sbjct: 390 QARHAAKKAREMVQRKTVMTGGGLPGKLSDCSEQDPTKCEVFLVEGDSAGGTAKQGRDRN 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ ++++EEI+N+ ALG+ + E+ K E LRYHK++I
Sbjct: 450 FQAILPLRGKILNVEKAMGHKVFESEEIKNIFTALGVTIGTEEDSKALNLEKLRYHKVVI 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+RY + L + G +++ PPLY V++G++ Y + D E +
Sbjct: 510 MCDADVDGSHIATLILTFFFRYMRGLIENGHVFIATPPLYMVKKGQRKVYAWSDEERIDL 569
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ + S+QR+KGLGEM QLWETT+NPE R+L+Q+ I+D EA++VFS LMG
Sbjct: 570 MEEMGNGS--SVQRYKGLGEMNAEQLWETTMNPEHRILRQVRIDDLKEADLVFSMLMGDE 627
Query: 534 VDTRKELIQNAANLVNLD 551
V R++ I+ A +D
Sbjct: 628 VPPRRDFIEKNATYAKID 645
>gi|225619544|ref|YP_002720801.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
gi|10644698|gb|AAG21374.1|AF288224_1 DNA Gyrase B subunit [Brachyspira hyodysenteriae]
gi|225214363|gb|ACN83097.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1]
Length = 636
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 363/554 (65%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q Y RG P
Sbjct: 94 VVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVNKDGKLYRQVYHRGIP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + + GT + F D ++F T + +D+ +A R+RELAFLN + I L+
Sbjct: 152 EEP----VKEVGTSKKTGTTVTFKADDEIFETTV-YDYKILANRLRELAFLNRGIRITLK 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D + NE+++ GG+E ++ LN +KK LHD + K+ D +++A+Q+ DA
Sbjct: 207 --DEREAEVVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKNEDKTDVEVAMQYV-DA 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE REGL
Sbjct: 264 YNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGEDTREGLVA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K +SA +A
Sbjct: 324 VVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEKIISAAQA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK GRDR FQ
Sbjct: 384 REAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKGGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++II+ DAD+
Sbjct: 444 AILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GASFDISKIRYGRVIIMADADI 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFP 478
DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D + K+ +
Sbjct: 503 DGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFLYAYSDEQRDKILAE-N 561
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG V R+
Sbjct: 562 KDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMGDEVKPRR 621
Query: 539 ELIQNAANLV-NLD 551
+ I++ A V NLD
Sbjct: 622 DFIESNARYVKNLD 635
>gi|310777811|ref|YP_003966144.1| DNA gyrase subunit B [Ilyobacter polytropus DSM 2926]
gi|309747134|gb|ADO81796.1| DNA gyrase subunit B [Ilyobacter polytropus DSM 2926]
Length = 634
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/554 (46%), Positives = 373/554 (67%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF +S Y VSGGLHGVG+SVVNALSE EV V RDG ++Q+Y+RG P
Sbjct: 91 IVLTVLHAGGKF--ENSNYKVSGGLHGVGVSVVNALSEWTEVFVKRDGKIHNQRYNRGVP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + GT +RF D ++F T +++D + + R++E+A+LN L I L
Sbjct: 149 ----EFDVKVVGKTNETGTTVRFKADSEIFET-LEYDFDVLKSRLKEMAYLNKGLEIVLI 203
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D E+ + F GG+ ++++ + + L + + + + I +++A+ + ++
Sbjct: 204 --DERKEEIKEEILKFDGGIVDFIKEVEEGQATLIPEPIYMAGESEDIIVEIAILY-TEK 260
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+T+ + N+I T +GGTH+ G + +LTR +N + K +K++D + G+ +REG+T
Sbjct: 261 QRETIYSFVNNINTHEGGTHVSGFRMALTRIINEMAKSLGLLKERDGNFQGQDIREGVTA 320
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++VP P+FEGQTKT+LGN EV VV + ++L ++E HP +I+ + L + KA
Sbjct: 321 IISIKVPEPQFEGQTKTKLGNSEVTAVVSSIMGQFLKMHMEDHPSDARNIIERILMSRKA 380
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+LV +KS L SLPGKLADCSS PEESE+FIVEGDSAGGSAKQGRDR Q
Sbjct: 381 REAAKKARELVMRKSALEVGSLPGKLADCSSKKPEESEVFIVEGDSAGGSAKQGRDRHTQ 440
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ +N E+++++ A G + G+D + E LRYHKIII+TDADV
Sbjct: 441 AILPLRGKIINVEKSGLHKALENNEVRSMVTAFGANI-GDDLELEKLRYHKIIIMTDADV 499
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTFFYRY L G IY+ PPL+KV G+ +QY Y D +LK++ + +
Sbjct: 500 DGAHIRTLILTFFYRYMVDLIHGGYIYIAQPPLFKVTAGRTIQYAYSDKQLKEITTVMDA 559
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y++QR+KGLGEM P QLWETT+N + R L Q+ I+DA EA+++F LMG +V+ R+
Sbjct: 560 DNKRYTLQRYKGLGEMNPDQLWETTMNHDTRTLLQVTIDDAREADILFDKLMGDKVEPRR 619
Query: 539 ELIQNAANLV-NLD 551
I+ ++ V NLD
Sbjct: 620 NFIEEHSHFVKNLD 633
>gi|226226219|ref|YP_002760325.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
gi|226089410|dbj|BAH37855.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27]
Length = 658
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/561 (48%), Positives = 374/561 (66%), Gaps = 16/561 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+ +TVLHAGGKF ++ Y VSGGLHGVG+SVVNALS+ L+V + RDG E+ ++RG
Sbjct: 103 LAMTVLHAGGKFDKNT--YKVSGGLHGVGVSVVNALSDVLKVWIKRDGKEHFMDFARG-- 158
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VTT L GT++ F PD +F +++ T+A R+RELAFLN + I LR
Sbjct: 159 VTTTKLKTLRNVPAKETGTKVWFKPDATIFQETTRYEWATLANRLRELAFLNKGIQITLR 218
Query: 121 KEDSDPEKN--QYNEYFFA-GGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
E D K+ E FFA GGL E+V +L +KKPLH DVV + D I I++ALQ+
Sbjct: 219 DERPDEMKDGQPREEVFFARGGLREFVVFLTGNKKPLHQDVVYLDTERDDIGIEMALQY- 277
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV--KDKDISLSGEHVR 234
+D+Y+D + + N+I T +GGTH+ G K++LT +N ++S + KDK+I LSG+ VR
Sbjct: 278 NDSYADNVFSFVNNINTHEGGTHLTGFKSALTSVINKYIERSSNLNKKDKEIRLSGDDVR 337
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT ++SV+V P+FEGQTKT+LGN E V + E L++YLE HP ++I+ K++
Sbjct: 338 EGLTAVLSVKVREPQFEGQTKTKLGNSEAEGAVRSVMNELLSQYLEEHPKTANAIIDKAI 397
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
SA +A AA++ARDL R+K+ L ++LPGKLADCS + P E+++VEGDSAGGSAKQGR
Sbjct: 398 SASRAREAARKARDLTRKKNALDVAALPGKLADCSLSDPALCELYLVEGDSAGGSAKQGR 457
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
+R FQAILPLRGKI+NVE+ + NEEI+ +I A+G G+K E F RY KIII+
Sbjct: 458 NRNFQAILPLRGKIINVEKARFDKVLSNEEIRTIITAIGTGIKDE-FDLGKTRYQKIIIM 516
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDGAHIRTLLLTFF+R + L D G +Y+ PPLY+V +GK+ Y Y + E
Sbjct: 517 TDADVDGAHIRTLLLTFFFRQMRELIDAGYMYIAQPPLYRVAKGKEEFYAYSEKERDSFS 576
Query: 475 SSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+QR+KGLGEM P QLW+TT++PE R + ++ +EDA A+ F +LMG
Sbjct: 577 ERLGGPEGRGNIMVQRYKGLGEMNPAQLWKTTMDPETRTMLRVTMEDAVLADQTFQTLMG 636
Query: 532 ARVDTRKELIQNAANLV-NLD 551
V+ R++ I++ A V NLD
Sbjct: 637 DDVEPRRQFIESNARFVSNLD 657
>gi|399927980|ref|ZP_10785338.1| DNA gyrase subunit B [Myroides injenensis M09-0166]
Length = 646
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/562 (45%), Positives = 373/562 (66%), Gaps = 24/562 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+RDG Y Q+YS+GK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLKATVFRDGKIYEQEYSQGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D++GT++ F PD +FT +F + T+AGR+RELAFLN LTI L
Sbjct: 155 LYPVKV----VGETDKKGTQVTFHPDPTIFTQVTEFSYETLAGRLRELAFLNKGLTITLT 210
Query: 121 -----KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLAL 173
ED P+ +E FF+ GL+E++++L+ ++ P+ DV+ D + +++AL
Sbjct: 211 DLREINEDGTPK----SEVFFSKDGLKEFIKFLDGNRVPIIGDVISMETDKGEVPVEVAL 266
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ +D YS+ + Y N+I T +GGTH++G + LTRTL S ++ ++G+
Sbjct: 267 IY-NDTYSENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGLLEKLKFEITGDDF 325
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+ I+ K
Sbjct: 326 REGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLEAYLEEHPNDAKIIVQKV 385
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A +A AAK+AR++V++K+V+ LPGKL+DCS P+ E+F+VEGDSAGG+AK+G
Sbjct: 386 ILAAQARHAAKKAREMVQRKTVMVGGGLPGKLSDCSEQDPKLCEVFLVEGDSAGGTAKEG 445
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYH 409
RDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K E LRYH
Sbjct: 446 RDRNFQAILPLRGKILNVEKAMGHKVFENEEIRNIFTALGVTIGTEEDSKALNLEKLRYH 505
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
K++I+ DADVDG+HI TL+LTFF+RY + L + +++ PPLY V++G + +Y + D E
Sbjct: 506 KVVIMCDADVDGSHIATLILTFFFRYMRGLIENEHVFIATPPLYLVKKGNKKEYAWTDEE 565
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ S A ++QR+KGLGEM QLW+TT+NPE R+L+++ I++ EA+ VFS L
Sbjct: 566 RIELMEQMGSGA--TVQRYKGLGEMNAEQLWDTTMNPEHRILRKVTIDNLQEADRVFSML 623
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A +D
Sbjct: 624 MGDEVPPRREFIEQNATYAKID 645
>gi|398349137|ref|ZP_10533840.1| DNA gyrase subunit B [Leptospira broomii str. 5399]
Length = 637
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/553 (46%), Positives = 373/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V++ G ++QKY++G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEWLEVEVYQRGKIHYQKYAKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ + D +GT +RF PD +FTT +F ++ + R RELAFLN L + ++
Sbjct: 153 QGPVSV----IGDSDARGTVVRFKPDATIFTTT-EFQYDVLTTRFRELAFLNKGLKLIVK 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
D+ + + +++ F GG+ +V++LN +K PLH + F ++ D + ++A+Q+ SD Y
Sbjct: 208 --DTRKAEIEEHDFLFDGGIVSFVEYLNENKHPLHKTIHFERNKDDVVAEIAIQY-SDTY 264
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKT-VKDKDISLSGEHVREGLTC 239
S+ + + N+I GGTH+EG +A+LTRTLN KK + VK + LSG+ ++EGLT
Sbjct: 265 SENIFCFTNNINNSLGGTHLEGFRAALTRTLNDFLKKDQQLVKKQPTGLSGDDLKEGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++P P+F QTK +L N E++ ++ E L+ + E +P V IL K + A KA
Sbjct: 325 VISVKIPQPQFNSQTKEKLVNAEIKGIMQTLTGEGLSLFFEENPSVTKKILEKCILAAKA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE++IVEGDSAGGSAKQGRDR +Q
Sbjct: 385 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAGSELYIVEGDSAGGSAKQGRDRNYQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + NEEI+ L+ ALG G+ ++F + +RYHKI I+TDAD+
Sbjct: 445 AILPLKGKILNVEKSRLDKILGNEEIRTLVSALGTGIGEDEFNIDKIRYHKIFIMTDADI 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY K + ++G +YV PPLY + GK Y Y D E ++ + +
Sbjct: 505 DGSHIRTLLLTFFFRYMKAVIEKGFLYVAQPPLYLIRHGKTATYLYSDKEKEEYLKTIGT 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE+R++ ++ ++D EA F+ LMG V R+
Sbjct: 565 DKAV-IQRYKGLGEMNPEQLWETTMDPEKRVVLKVKLDDYVEAEDTFNILMGDEVVPRRR 623
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 624 FIEVNAAKVANLD 636
>gi|294674979|ref|YP_003575595.1| DNA gyrase subunit B [Prevotella ruminicola 23]
gi|294471706|gb|ADE81095.1| DNA gyrase, B subunit [Prevotella ruminicola 23]
Length = 658
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/568 (47%), Positives = 373/568 (65%), Gaps = 26/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y +GKP
Sbjct: 99 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMMSQVFRNGHIYQQEYEKGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD +FTT ++ ++ IA R+RELA+LN +TI L
Sbjct: 157 LYDVKI----VGDTDKTGTRQQFWPDGSIFTTT-EYKYDIIAKRMRELAYLNAGITITLT 211
Query: 121 KEDSDPEKN-QYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
D E N + E F A GL+E+V++++ + + D + + + DG+ I++AL + S
Sbjct: 212 DLRPDEEGNLRQPEVFHAKEGLKEFVRYVDRHRTSIIGDPICLKTEKDGVPIEVALLYNS 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS----KTVKDKDISLSGEHV 233
D YS+ + Y N+I TI+GGTH+ G + +L RTL + K ++ I ++ +
Sbjct: 272 D-YSENIHSYVNNINTIEGGTHLTGFRIALARTLKKYADEDDQLRKQIEKAKIEVAQDDF 330
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT IISV+V P+FEGQTKT+LGN EV V ++V E +T YLE +P +I K
Sbjct: 331 REGLTAIISVKVAEPQFEGQTKTKLGNSEVNGAVQKAVGEAMTNYLEENPKEAHTICEKV 390
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+ + LPGKLADCS+ P+E EIF+VEGDSAGGSAKQG
Sbjct: 391 ILAATARIAARKARESVQRKNPMTGGGLPGKLADCSNKDPKECEIFLVEGDSAGGSAKQG 450
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRY 408
RDR FQAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED K + LRY
Sbjct: 451 RDRHFQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDSKDANIDKLRY 510
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYR+ + G +Y+ PPLYK K +YCY +
Sbjct: 511 DKIIIMTDADVDGSHIDTLIMTLFYRFMPQVIQGGHLYIATPPLYKCTYKKTSEYCYTEQ 570
Query: 469 EL-----KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
+ K V + L++ QR+KGLGEM P QLWETT+NPE R+LKQ+ IE+AAEA+
Sbjct: 571 QRQAFIDKYVAGNGDDKGLHT-QRYKGLGEMNPEQLWETTMNPENRLLKQVTIENAAEAD 629
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 EIFSMLMGDDVEPRREFIEKNATYANID 657
>gi|296127762|ref|YP_003635014.1| DNA gyrase subunit B [Brachyspira murdochii DSM 12563]
gi|296019578|gb|ADG72815.1| DNA gyrase, B subunit [Brachyspira murdochii DSM 12563]
Length = 637
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/554 (47%), Positives = 359/554 (64%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q Y RG P
Sbjct: 95 VVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVRKDGKLYRQVYHRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + + GT + F D +F T + +D+ +A R+RELAFLN + I L
Sbjct: 153 EEP----VKEVGTSTKNGTTVIFKADADIFETTV-YDYKILANRLRELAFLNRGIRITL- 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D + NE+++ GG+E ++ LN +KK LHD + K D +++A+Q+ DA
Sbjct: 207 -TDKREAETVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKTEDKTDVEVAMQYV-DA 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE REGL
Sbjct: 265 YNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGEDTREGLVA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K +SA A
Sbjct: 325 VVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEKIISAANA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK GRDR FQ
Sbjct: 385 REAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKGGRDRHFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++II+ DAD+
Sbjct: 445 AILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GASFDISKIRYGRVIIMADADI 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFP 478
DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D + K+ S
Sbjct: 504 DGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFTYAYSDEQRDKILSE-N 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG V R+
Sbjct: 563 KDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMGDEVKPRR 622
Query: 539 ELIQ-NAANLVNLD 551
+ I+ NA + NLD
Sbjct: 623 DFIEANARYVKNLD 636
>gi|283768639|ref|ZP_06341551.1| DNA gyrase, B subunit [Bulleidia extructa W1219]
gi|283105031|gb|EFC06403.1| DNA gyrase, B subunit [Bulleidia extructa W1219]
Length = 659
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/557 (47%), Positives = 371/557 (66%), Gaps = 20/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG + Y VSGGLHGVG S VNALSE LEVTV+ +G Y ++ G P
Sbjct: 115 IFTVLHAGGKFGGGA--YKVSGGLHGVGASAVNALSEFLEVTVYHEGSVYFVRFENGGHP 172
Query: 61 VTTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 116
V L TC V D+ G+ +RF D +FT +D N + RIR+LAFLN +
Sbjct: 173 VEPLKVIGTCDV------DKHGSLVRFKADPTIFTETTVYDFNILRNRIRQLAFLNKGIR 226
Query: 117 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQW 175
I + + ++YFF GGL+EYV+++N +K +H DV+ D I +++A Q+
Sbjct: 227 IKFHDLREVNFEKRDHDYFFEGGLKEYVKFINENKDKVHEDVIYSEGYEDNIQVEVACQY 286
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ +Y+ ++ + N+I T+DGGTH EG + +LTR +N +++ +K+KD +++ E +E
Sbjct: 287 NT-SYNPSIYTFCNNITTVDGGTHEEGFRMALTRIVNKYARENNFLKEKDENVTQEDCKE 345
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT IISV+ P+P++ QTK++L N EVRK+V +L +P+ +I+ K +
Sbjct: 346 GLTAIISVKHPDPQYISQTKSKLTNSEVRKIVSDIFGTQFERFLMENPNQAKAIMEKIVI 405
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +A LAAKRA+++ R KS ++ SLPGKL+DCSS P SEI++VEGDSAGGSAK GRD
Sbjct: 406 ASQARLAAKRAKEITR-KSSIKVGSLPGKLSDCSSKDPSISEIYLVEGDSAGGSAKNGRD 464
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
FQAILPLRGKILNVE+ ++N+EI+++I A G GV+ E LRYHKI+I+T
Sbjct: 465 SHFQAILPLRGKILNVEKTRPEKAFENQEIRSMITAFGAGVQDE-VDTSKLRYHKIVIMT 523
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTLLLTFFYR+ + + ++G +Y+ PPL+KV++G+ V+Y Y D +L+++K+
Sbjct: 524 DADVDGAHIRTLLLTFFYRFLRPVLEQGYVYIAQPPLFKVQKGQSVRYAYTDRQLEELKA 583
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
SIQR+KGLGEM QLWETT++P+ R L ++ IEDA A+ FS LMG V+
Sbjct: 584 EMGER--LSIQRYKGLGEMDASQLWETTMDPKSRTLIRVTIEDAEYADQNFSMLMGEEVE 641
Query: 536 TRKELI-QNAANLVNLD 551
RK I +NA + NLD
Sbjct: 642 PRKNFILENAHFVENLD 658
>gi|297582344|ref|YP_003698124.1| DNA gyrase subunit B [Bacillus selenitireducens MLS10]
gi|297140801|gb|ADH97558.1| DNA gyrase, B subunit [Bacillus selenitireducens MLS10]
Length = 637
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/553 (47%), Positives = 371/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V ++G ++ + RG
Sbjct: 95 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSFLEVEVHKEGEVHYISFERGAV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + S ++ GT IRF D +FT +D + +A R+REL+FLN LTI +
Sbjct: 153 KEELNV----IGSTEKTGTLIRFKADNMIFTETTVYDFDVLANRLRELSFLNKGLTIEIT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
+ E+++ +YF+ GG+ +V+ LN K LH+ F + +GI +++A+Q+ +D+
Sbjct: 209 DKR---EEDKSAKYFYEGGISSFVEHLNRTKTALHEPPIFIESEKEGIQVEVAMQY-NDS 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + +AN+I T +GGTH G K +LTR +N +K+ K+ D +L G+ VREGLT
Sbjct: 265 FASNLYSFANNINTHEGGTHESGFKTALTRVINDYARKNGLFKENDPNLIGDDVREGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SV++ NP+FEGQTKT+LGN E R + D E++ +++ +P V I+ K + A +A
Sbjct: 325 IVSVKIENPQFEGQTKTKLGNSEARTITDSLFTEHMAKFMAENPTVARQIVEKGIMASRA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAK+AR+L R+KS L SSLPGKLADCS+ SEI++VEGDSAGGSAKQGRDR FQ
Sbjct: 385 RDAAKKARELTRRKSALEVSSLPGKLADCSTKDASISEIYVVEGDSAGGSAKQGRDRHFQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ + N EI+ +I ALG G+ GE+F RYHKIII+TDADV
Sbjct: 445 AILPLRGKIINVEKARLDKILANNEIRAIITALGTGI-GEEFDITKARYHKIIIMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF YRY + L +EG IY+ PPLY++++GK V Y +++ E++++ +
Sbjct: 504 DGAHIRTLLLTFLYRYMRPLIEEGYIYIAQPPLYQIKQGKAVHYAFNEKEMERILGELSA 563
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ +QR+KGLGEM P QLWETT++P R L Q+ ++DA A+ VF +LMG RV+ R++
Sbjct: 564 SPKPGLQRYKGLGEMNPTQLWETTMDPATRTLLQVSLKDAMLADEVFETLMGDRVEPRRD 623
Query: 540 LIQNAANLV-NLD 551
IQ A+ V NLD
Sbjct: 624 FIQENAHYVKNLD 636
>gi|303235765|ref|ZP_07322372.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
gi|302484212|gb|EFL47200.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN]
Length = 683
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/566 (46%), Positives = 371/566 (65%), Gaps = 23/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y +GKP
Sbjct: 125 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMMSQVFRNGKIYQQEYEKGKP 182
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ V D+ GTR +FWPD +FTT I + + +A R+RELAFLN + I L
Sbjct: 183 LYSVKI----VGDTDKTGTRQQFWPDASIFTTTI-YQWDIVARRMRELAFLNAGIKITLT 237
Query: 121 KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 238 DLRPNEEGKTKQEVFHAQEGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNND 297
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ I ++GE R
Sbjct: 298 -YNENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDTQIAKQIEKAKIEITGEDFR 356
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P I K +
Sbjct: 357 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPAEAKLICDKVI 416
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P+E EIF+VEGDSAGGSAKQGR
Sbjct: 417 LAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKECEIFLVEGDSAGGSAKQGR 476
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GE DF+ + LRY
Sbjct: 477 DRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVDGESDFEANTDKLRYD 536
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +YCY + +
Sbjct: 537 KIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTFKKVSEYCYTEQQ 596
Query: 470 ----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
L+K N QR+KGLGEM P QLW+TT+NP+ R+LKQ+ IE+A A+ +
Sbjct: 597 RLQFLEKYVGGDEENKALHTQRYKGLGEMNPEQLWDTTMNPKTRLLKQVTIENATTADEM 656
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 657 FSMLMGDDVEPRREFIEQNATYANID 682
>gi|261403882|ref|YP_003240123.1| DNA gyrase subunit B [Paenibacillus sp. Y412MC10]
gi|261280345|gb|ACX62316.1| DNA gyrase, B subunit [Paenibacillus sp. Y412MC10]
Length = 636
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/554 (50%), Positives = 370/554 (66%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 95 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKVVVQVKRDGHIYQQEYHRGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT + F PD ++FT +D+ T+ RIRELAFLN + + L
Sbjct: 153 QYDIKV----IGDSDDHGTTVTFLPDPEIFTETTVYDYTTLLTRIRELAFLNKGIALTLT 208
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + ++YF + GG+ EYV++LN K+ LH D + D I ++++LQ+ +D
Sbjct: 209 DE-----RTGASDYFKYEGGIIEYVKFLNEKKEALHEDPIYVEGSRDNIQVEVSLQY-ND 262
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD +LSG+ VREGLT
Sbjct: 263 SYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKTGLIKDNTSNLSGDDVREGLT 322
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV+VP P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V IL K+L A +
Sbjct: 323 AIISVKVPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLQENPAVSRRILEKALQASR 382
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+KS L S+LPGKLADCSS SE++IVEGDSAGGSAKQGRDR F
Sbjct: 383 AREAARKAREMTRRKSALEVSALPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRHF 442
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+ +I ALG G+ EDF RYHKIII+TDAD
Sbjct: 443 QAILPLRGKILNVEKARLDRILSNAEIRAIITALGTGI-AEDFDLSKARYHKIIIMTDAD 501
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L + G IY+ PPL+K+ER K ++Y + E ++ F
Sbjct: 502 VDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQPPLFKIERNKVIRYAGSERERDEIIKEFG 561
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N ++QR+KGLGEM QLWETT++PE R + Q+ IEDA A+ +F +LMG V+ R+
Sbjct: 562 ENVKINVQRYKGLGEMNAGQLWETTMDPESRTMLQVTIEDAILADTLFDTLMGDNVEPRR 621
Query: 539 ELIQNAANLV-NLD 551
+ IQ A V NLD
Sbjct: 622 DFIQEHAKSVRNLD 635
>gi|363583067|ref|ZP_09315877.1| DNA gyrase subunit B [Flavobacteriaceae bacterium HQM9]
Length = 645
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/561 (45%), Positives = 370/561 (65%), Gaps = 22/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G + Q+Y RGK
Sbjct: 96 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLHATVFREGKVWEQEYERGKA 153
Query: 61 VTTLTCHVLPVDSK---DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
V PV S D+ GT + F PD+ +F ++++++T+A R+RELA+LN +TI
Sbjct: 154 V-------YPVKSTGDTDKNGTIVTFLPDRSIFQQTVEYNYDTLASRMRELAYLNKGITI 206
Query: 118 ALRKEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
L + +K ++ +E F + GL+E+V +L+ + P+ V+ + + I +++A+
Sbjct: 207 TLTDARNTDDKGEFISETFHSNEGLKEFVSFLDASRNPIIGHVIAMEGEKNDIPVEVAMI 266
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ +D+Y++ + Y N+I T +GGTH+ G + LT TL S + ++G+ R
Sbjct: 267 Y-NDSYAENLHSYVNNINTHEGGTHLSGFRRGLTSTLKKFADNSGLLDKLKFEIAGDDFR 325
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P +I+ K +
Sbjct: 326 EGLTAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPADAKTIIQKVI 385
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AAK+AR++V++K+V+ LPGKL+DCS T P E EIF+VEGDSAGG+AKQGR
Sbjct: 386 LAAQARHAAKKAREMVQRKTVMSIGGLPGKLSDCSETDPAECEIFLVEGDSAGGTAKQGR 445
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----ALRYHK 410
DR FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHK
Sbjct: 446 DRNFQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVSIGTEEDSKALNLTKLRYHK 505
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+ DADVDG+HI TL+LTFF+RY K L ++G +Y+ PPLY V++G + QY ++D +
Sbjct: 506 VVIMCDADVDGSHIATLILTFFFRYMKELIEQGYVYIAAPPLYLVKKGAKKQYAWNDDQR 565
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ + N+ IQR+KGLGEM QLW+TT+NPE R ++Q+ IE EA+ VFS LM
Sbjct: 566 DILVKEYGENS--KIQRYKGLGEMNAEQLWDTTMNPEFRTMRQVTIESMTEADRVFSMLM 623
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 624 GDEVPPRREFIEKNAIYANID 644
>gi|329925092|ref|ZP_08280036.1| DNA gyrase, B subunit [Paenibacillus sp. HGF5]
gi|328940211|gb|EGG36543.1| DNA gyrase, B subunit [Paenibacillus sp. HGF5]
Length = 634
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/554 (50%), Positives = 371/554 (66%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKFGG S LHGVG+SVVNALS + V V RDG Y Q+Y RG P
Sbjct: 93 VVMTVLHAGGKFGGGGYKVSGG--LHGVGVSVVNALSSKVVVQVKRDGNIYQQEYHRGVP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT + F PD ++FT +D+ T+ RIRELAFLN + + L
Sbjct: 151 QYDIKI----IGDSDDHGTTVTFLPDPEIFTETTVYDYTTLLTRIRELAFLNKGIALTLT 206
Query: 121 KEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSD 178
E + ++YF + GG+ EYV++LN K+ LH D + D I ++++LQ+ +D
Sbjct: 207 DE-----RTGASDYFKYEGGIIEYVKFLNEKKEALHEDPIYVEGSRDNIQVEVSLQY-ND 260
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
+Y++ + +AN+I T +GGTH G K++LTR +N +K+ +KD + +LSG+ VREGLT
Sbjct: 261 SYTENIYSFANNINTHEGGTHESGFKSALTRIINDYARKTGLIKDNNNNLSGDDVREGLT 320
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
IISV+VP P+FEGQTKT+LGN EVR +V+ E L E+L+ +P V IL K+L A +
Sbjct: 321 AIISVKVPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQEFLQENPAVSRRILEKALQASR 380
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++ R+KS L S+LPGKLADCSS SE++IVEGDSAGGSAKQGRDR F
Sbjct: 381 AREAARKAREMTRRKSALEVSALPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDRHF 440
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ + N EI+ +I ALG G+ EDF RYHKIII+TDAD
Sbjct: 441 QAILPLRGKILNVEKARLDRILSNAEIRAIITALGTGI-AEDFDLSKARYHKIIIMTDAD 499
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY + L + G IY+ PPL+K+ER K ++Y + E ++ F
Sbjct: 500 VDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQPPLFKIERNKVIRYAGSERERDEIIKEFG 559
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N ++QR+KGLGEM QLWETT++PE R + Q+ IEDA A+ +F +LMG V+ R+
Sbjct: 560 ENVKINVQRYKGLGEMNAGQLWETTMDPESRTMLQVTIEDAILADTLFDTLMGDNVEPRR 619
Query: 539 ELIQNAANLV-NLD 551
+ IQ A V NLD
Sbjct: 620 DFIQEHAKSVRNLD 633
>gi|320537025|ref|ZP_08037004.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
gi|320146100|gb|EFW37737.1| DNA gyrase, B subunit [Treponema phagedenis F0421]
Length = 638
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/556 (47%), Positives = 378/556 (67%), Gaps = 16/556 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF S Y VSGGLHGVG+SVVNALS +E TV++DG E++QK+ G P
Sbjct: 93 IVLTKLHAGGKFDKGS--YKVSGGLHGVGVSVVNALSTWMEATVYKDGAEHYQKFEIGVP 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + + D+ GT IR+ D +F +D + +A R+RELAFLN +TI +R
Sbjct: 151 LDS----VKKISTTDKHGTTIRWAADPAIFKETTTYDFDVLATRLRELAFLNSNITIVMR 206
Query: 121 KED-SDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSD 178
E S P++ + F GG+ +VQ+L+ K+ L + + + + I +++ALQ+ +D
Sbjct: 207 DERLSTPKEATFA---FEGGISHFVQYLHGTKQVLPAEPIYIEAEKNDIIMEIALQY-ND 262
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNS-LGKKSKTVK--DKDISLSGEHVRE 235
Y++ +L + N I T +GGTH+EG K++LTR +N L K SK +K DK+ L+GE VR
Sbjct: 263 GYNENLLSFVNDINTREGGTHLEGFKSALTRVMNEFLKKNSKLIKKLDKEEKLTGEDVRA 322
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT +IS++VP P+FEGQTKT+LGN +VR +VD V E LT + E +P ++D IL K++S
Sbjct: 323 GLTAVISIKVPEPQFEGQTKTKLGNSDVRGIVDSFVNEKLTLFFEQNPAIIDKILEKTVS 382
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +AA+RA++ R+KS L S LPGKLADCS P+ E++IVEGDSAGGSAK+GRD
Sbjct: 383 EATARIAARRAKEATRRKSGLDSFGLPGKLADCSLKDPKLCEVYIVEGDSAGGSAKKGRD 442
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
+ QAILPL GK+LNVE+ + NE++Q +I +LG G+ G+DF + +RYHKIII+
Sbjct: 443 SKTQAILPLWGKMLNVEKTRIDKVMNNEKLQPIIASLGTGI-GKDFNIDKIRYHKIIIMA 501
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDG+HIRTLLLTFF+RY + +EG +Y+ +PPLYK+ K+ Y Y+D E +V
Sbjct: 502 DADVDGSHIRTLLLTFFFRYMPQIIEEGYVYLAMPPLYKISYNKKEWYVYNDEERDQVLK 561
Query: 476 SFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVD 535
++QR+KGLGEM QLWETT++P +R + ++ + DA EA+ +FS+LMG V+
Sbjct: 562 EIGKENNVAVQRYKGLGEMDGTQLWETTMDPARRKMMRVTLPDAIEADRIFSTLMGEEVE 621
Query: 536 TRKELIQNAANLVNLD 551
R++ I+ A NLD
Sbjct: 622 PRRQFIEENAVYANLD 637
>gi|338214332|ref|YP_004658393.1| DNA gyrase subunit B [Runella slithyformis DSM 19594]
gi|336308159|gb|AEI51261.1| DNA gyrase, B subunit [Runella slithyformis DSM 19594]
Length = 656
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/562 (48%), Positives = 383/562 (68%), Gaps = 21/562 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS+ L V V R+G + Q+YS GKP
Sbjct: 104 VVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSKHLRVEVHREGKIFEQEYSIGKP 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + S D GT + F PD +FTT+ ++ + T+A RIREL+FLN +T+ L
Sbjct: 162 LYP----VRAIGSADDTGTFVHFLPDDSIFTTS-EYKYETVANRIRELSFLNKGITLTLT 216
Query: 121 KEDSDPEKNQ--YNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGIT-IDLALQWCS 177
E Q Y E+ GGL E+V +L++ + L + ++ G+ +++A+ + +
Sbjct: 217 DLRDLDESGQPRYEEFHSQGGLVEFVTYLDSTRDHLIPTPIYMENEKGVVPVEVAMIYNT 276
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+YS+ ++ Y N+I TI+GGTH+ G + +LTRTL + KS + + I +SG+ REGL
Sbjct: 277 -SYSENVVSYVNNINTIEGGTHVSGFRMALTRTLKNYADKSGILAKEKIEISGDDFREGL 335
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN +V V Q V E L +L+ +P +I+ K + A
Sbjct: 336 TAVISVKVQEPQFEGQTKTKLGNSDVAGAVSQVVSEMLDNFLQENPKEARTIVDKVILAA 395
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AA++AR++V++K+VL + LPGKLADCS T P E+++VEGDSAGGSAKQGR+R
Sbjct: 396 KARIAARKAREMVQRKTVLGGTGLPGKLADCSETDPAGCELYLVEGDSAGGSAKQGRNRA 455
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA-----LRYHKII 412
FQAILPLRGKILNVE+ E +Y+NEEI+N+I ALG+ V G+D + A LRYHK+I
Sbjct: 456 FQAILPLRGKILNVEKAQEYKIYENEEIKNMITALGV-VFGKDGDERALNMDKLRYHKVI 514
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDADVDG+HIRTL+LTFF+RY K L D G +Y+ PPLY V++GK+ +YC+ +A+ ++
Sbjct: 515 IMTDADVDGSHIRTLILTFFFRYMKDLIDSGFVYIAQPPLYLVKKGKEERYCWTEAQREQ 574
Query: 473 VKSSFP---SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
+++Y IQR+KGLGEM P QLWETT++P +R LKQ+ IE AAEA+ +FS L
Sbjct: 575 AVMEIAGGKEDSVY-IQRYKGLGEMNPEQLWETTMDPSRRSLKQVSIESAAEADHLFSML 633
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R+E I+ A +D
Sbjct: 634 MGDEVAPRREFIERNAKYARVD 655
>gi|398340644|ref|ZP_10525347.1| DNA gyrase subunit B [Leptospira kirschneri serovar Bim str. 1051]
gi|418686789|ref|ZP_13247954.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740513|ref|ZP_13296890.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421130021|ref|ZP_15590221.1| DNA gyrase, B subunit [Leptospira kirschneri str. 2008720114]
gi|410359396|gb|EKP06505.1| DNA gyrase, B subunit [Leptospira kirschneri str. 2008720114]
gi|410738860|gb|EKQ83593.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410751890|gb|EKR08866.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 639
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 370/553 (66%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYEKGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNVDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNVGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|188588443|ref|YP_001919471.1| DNA gyrase subunit B [Clostridium botulinum E3 str. Alaska E43]
gi|251778873|ref|ZP_04821793.1| DNA gyrase, B subunit [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188498724|gb|ACD51860.1| DNA gyrase, B subunit [Clostridium botulinum E3 str. Alaska E43]
gi|243083188|gb|EES49078.1| DNA gyrase, B subunit [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 635
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 275/555 (49%), Positives = 386/555 (69%), Gaps = 19/555 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE VTV R+G + Q+YS+GK
Sbjct: 95 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCIVTVKREGHIWQQEYSKGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L + + GT I F PD ++F ++FD +T++ R+RELAFLN + I L
Sbjct: 153 LYDLK----QIGDTEESGTTIYFKPDAEIFD-EVEFDFDTLSQRLRELAFLNKGINITLI 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
D E+N Y++ GG++ +V +LN +K PLH + + + D +T++L LQ+ +D
Sbjct: 208 DCRDDREEN----YYYEGGIKSFVAYLNRNKTPLHPEPIYVEGIKDKVTVELGLQY-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K +LTR N K+ +K+ D + SG+ +REGLT
Sbjct: 263 YTENLFSFANNIDTIEGGTHLVGFKTALTRAFNDYAKRFGFIKENDKNFSGDDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EV+ +VD V EY+ +LE +P I+ K+L A +A
Sbjct: 323 VISVKIEDPQFEGQTKTKLGNSEVKGIVDSIVSEYIGIFLEENPGTSKIIIDKALMAARA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R KSVL ++LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDR+FQ
Sbjct: 383 REAARKARELTR-KSVLERTTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQGRDRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + +E I++++ A G G+ G+DF E +RY++III+TDADV
Sbjct: 442 AILPLRGKIMNVEKQRLDKILNSETIRSMVTAFGGGI-GKDFDIEKIRYNRIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-- 477
DGAHIRTLLLTFFYRY + L ++G +Y+ PPL++V +GK+ Y Y DAEL +V
Sbjct: 501 DGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLFRVGKGKKETYAYSDAELDQVLQDMGG 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
N++ IQR+KGLGEM QLW+TT++P +R+L + IEDA A+ +F+ LMG +V+ R
Sbjct: 561 KDNSV-DIQRYKGLGEMNATQLWDTTMDPSKRILLKAEIEDAMAADEIFTILMGEKVEPR 619
Query: 538 KELI-QNAANLVNLD 551
+E I QNA N+VNLD
Sbjct: 620 REFIEQNAKNVVNLD 634
>gi|212692798|ref|ZP_03300926.1| hypothetical protein BACDOR_02296 [Bacteroides dorei DSM 17855]
gi|237709487|ref|ZP_04539968.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|265754693|ref|ZP_06089745.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|345514532|ref|ZP_08794043.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|423230241|ref|ZP_17216645.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|423241032|ref|ZP_17222146.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|423243952|ref|ZP_17225027.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
gi|212664587|gb|EEB25159.1| DNA gyrase, B subunit [Bacteroides dorei DSM 17855]
gi|229436655|gb|EEO46732.1| DNA gyrase, B subunit [Bacteroides dorei 5_1_36/D4]
gi|229456543|gb|EEO62264.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA]
gi|263234807|gb|EEZ20375.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA]
gi|392631750|gb|EIY25719.1| DNA gyrase, B subunit [Bacteroides dorei CL02T00C15]
gi|392643094|gb|EIY36852.1| DNA gyrase, B subunit [Bacteroides dorei CL03T12C01]
gi|392643470|gb|EIY37220.1| DNA gyrase, B subunit [Bacteroides dorei CL02T12C06]
Length = 654
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/564 (46%), Positives = 365/564 (64%), Gaps = 23/564 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R G Y Q+YS G P
Sbjct: 100 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMTTQVFRGGKIYQQEYSCGHP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFT-TAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ + V V + D GT+ FWPD +FT T +FD + R+RELA+LN +TI+L
Sbjct: 158 LYS----VKEVGTADITGTKQTFWPDDTIFTVTEYKFD--ILQARMRELAYLNKGITISL 211
Query: 120 RKEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWC 176
E + + F G++E+V++LN + + L DV+ + + I+ A+ +
Sbjct: 212 TDRRIKEEDGSFKKEIFHSDEGVKEFVRFLNRNNEALIDDVIYLNTEKNNTPIECAIMY- 270
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ Y +++ Y N+I TI+GGTH G +++LTR L + +K ++ + +SGE REG
Sbjct: 271 NTGYRESLHSYVNNINTIEGGTHEAGFRSALTRVLKKYAEDTKALEKAKVEISGEDFREG 330
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
L +ISV+V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I+ K + A
Sbjct: 331 LIAVISVKVAEPQFEGQTKTKLGNSEVSGAVNQAVGEALTYYLEEHPKEAKQIVDKVILA 390
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
A +AA++AR+ V++KS + LPGKLADCSS PEE E+F+VEGDSAGGSAKQGR R
Sbjct: 391 ATARIAARKARESVQRKSPMGGGGLPGKLADCSSRNPEECELFLVEGDSAGGSAKQGRSR 450
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKKEA----LRYHK 410
FQAILPLRGKILNVE+ ++++E+ N+I ALG+ GV G D K+A LRYHK
Sbjct: 451 AFQAILPLRGKILNVEKAMWHKAFESDEVNNIITALGVRFGVDGNDDSKKANIDKLRYHK 510
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+TDADVDG+HI TL++T FYRY + + G +Y+ PPLYK +GK +YCY +
Sbjct: 511 VVIMTDADVDGSHIDTLIMTLFYRYMPEIIENGHLYIANPPLYKCSKGKISEYCYTEEAR 570
Query: 471 KKVKSSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
+ + N +++ QR+KGLGEM P QLWETT+NPE R+LKQ+ I++AA + +FS
Sbjct: 571 QAFIQKYGDGQENGIHT-QRYKGLGEMNPEQLWETTMNPETRILKQVTIDNAANVDYIFS 629
Query: 528 SLMGARVDTRKELIQNAANLVNLD 551
LMG V R+E I+ A N+D
Sbjct: 630 MLMGDDVAPRREFIEKNATYANID 653
>gi|383788300|ref|YP_005472868.1| DNA gyrase subunit B [Caldisericum exile AZM16c01]
gi|381363936|dbj|BAL80765.1| DNA gyrase subunit B [Caldisericum exile AZM16c01]
Length = 649
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 374/552 (67%), Gaps = 16/552 (2%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T L+AGGKF G Y VSGGLHGVG+SVVNALS+ L+V V+R+G Y Q+Y++GKP+
Sbjct: 110 LTKLNAGGKFEGKV--YHVSGGLHGVGVSVVNALSKYLKVRVFRNGKIYEQEYAKGKPLY 167
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
+L + + GT I F PD +F T ++F + I +++ELA+LN L I E
Sbjct: 168 SLKE--VGNSLFENTGTEITFIPDDTIFET-VEFKEDIIKEKLKELAYLNKGLKIKFINE 224
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYS 181
+ E N Y G+ E V+ +N ++ + + + F + D +++A+Q+ S +S
Sbjct: 225 KTGEE----NIYESKEGIVELVKDINKGEQVIPENPIYFNYEEDHFFLEIAMQYNS-GFS 279
Query: 182 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCII 241
+L + N+IRT +GGTH G+K +LT+ LN G + K +KD+ +L+ + V+EGLT II
Sbjct: 280 SEILSFVNNIRTTEGGTHELGLKLALTKLLNDEGLQLKMIKDE--ALTFDDVKEGLTAII 337
Query: 242 SVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAAL 301
+V++ P+FEGQTKT+LGN EV+ V V+ LT Y + H D L IL K L A A +
Sbjct: 338 NVKMLEPQFEGQTKTKLGNAEVKNKVYNIVKTQLTLYFDKHVDELQKILKKVLLAQSARI 397
Query: 302 AAKRARDLVRQKSVLR-SSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAK+A++LVR+K L S LPGKLADCS P ++E++IVEG+SAGGSAKQ RDR+FQA
Sbjct: 398 AAKKAKELVRRKGALDFSGRLPGKLADCSLNDPAQTELYIVEGESAGGSAKQARDRKFQA 457
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
+LPLRGKILNVE+ + A +EEI+NLI +LG GV GEDF++E LRYHKIII+TDADVD
Sbjct: 458 VLPLRGKILNVEKVNMAHALSSEEIKNLITSLGCGV-GEDFREEHLRYHKIIIMTDADVD 516
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFF+RY + L ++G +Y+ PPLY+V K V+Y Y D ELK V
Sbjct: 517 GAHIRTLLLTFFFRYMRPLIEKGYLYIAQPPLYRVSYDKDVRYAYSDEELKHVMEHIKDP 576
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+QR+KGLGEM P QLWETT++P +R++K++ IE+A +A+ +F LMG+ V RKE
Sbjct: 577 NKAEVQRYKGLGEMDPQQLWETTMDPTRRIIKRVTIEEAEQADKLFELLMGSEVQPRKEF 636
Query: 541 IQN-AANLVNLD 551
I N A +VNLD
Sbjct: 637 IMNHAKEVVNLD 648
>gi|237733416|ref|ZP_04563897.1| DNA gyrase subunit B gyrB [Mollicutes bacterium D7]
gi|229383451|gb|EEO33542.1| DNA gyrase subunit B gyrB [Coprobacillus sp. D7]
Length = 641
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/553 (49%), Positives = 376/553 (67%), Gaps = 13/553 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-KP 60
I TVLHAGGKFGG S LHGVG SVVNALSE LEV V RDG EY+Q++ G KP
Sbjct: 98 IFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSEWLEVNVHRDGHEYYQRFENGGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + D GT + F DK +F +D++T+ RIRELAFLN L ++L
Sbjct: 156 AGELKI----IGDSDITGTIVTFKADKIIFKEGTVYDYDTLRQRIRELAFLNKGLRLSL- 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDA 179
ED ++ +EY++ GG++EYV ++N +K P+H+ + + +D+ ITI++ +Q+ +D
Sbjct: 211 -EDQRNGVDRKHEYYYEGGIKEYVAYINKNKTPIHEEIIYVEDMQQEITIEVGMQY-NDG 268
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + N+I T +GGTH EG + +LTR +N+ K +K + +LSG+ VREGLT
Sbjct: 269 YQSNIYSFCNNINTHEGGTHEEGFRLALTRVINNYAKSKGLLKKDEEALSGDDVREGLTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P+P++EGQTKT+LGN EVRK+ + L ++L +PD I+ K++ A +A
Sbjct: 329 IISVKHPDPQYEGQTKTKLGNAEVRKIASNIISASLDKFLLENPDTAKIIVDKAIVAARA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+K+VL S+LPGKLADCSS E EIFIVEG+SAGGSAK GRDRR Q
Sbjct: 389 RMAAKKAREMTRRKNVLEVSNLPGKLADCSSKDASECEIFIVEGNSAGGSAKMGRDRRIQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+++I A G G+ GE+F + LRYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKSRLEKILGNAEIRSMITAFGTGI-GEEFNLDKLRYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG HIR L+LTF YRY + L + G +Y PPLY ++ GK YCY D EL +K+
Sbjct: 508 DGGHIRILMLTFLYRYLRPLVEGGFVYAAQPPLYLLKHGKDEYYCYSDEELDDLKTKIGE 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
A YSIQR+KGLGEM QLWETT++PE+R+L Q+ +++A EA+++F LMG +V+ R+E
Sbjct: 568 GAKYSIQRYKGLGEMNAEQLWETTMDPEKRILNQIDLDEAMEADMIFDMLMGEKVEPRRE 627
Query: 540 LIQ-NAANLVNLD 551
IQ NA + +LD
Sbjct: 628 FIQENAKYVTDLD 640
>gi|442803502|ref|YP_007371651.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442739352|gb|AGC67041.1| DNA gyrase subunit B [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 643
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/559 (47%), Positives = 370/559 (66%), Gaps = 17/559 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LH+GGKFGGS GY VSGGLHGVG +VVNALSE + V V RDG Y Q+Y RGK
Sbjct: 98 VVHTTLHSGGKFGGS--GYKVSGGLHGVGAAVVNALSEWMVVEVMRDGKRYRQRYERGKA 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT + V D GT F PD ++F ++FD+ + R RE+AFLN LTI
Sbjct: 156 VTGIEI----VGEADSTGTITTFKPDPEIFE-VVEFDYEMLLKRFREIAFLNKGLTIQFI 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D K N + GG+ +V+++N +K +HD ++ + + I++A Q+ +D+
Sbjct: 211 DERGDEVKE--NILHYEGGIISFVKYINQNKDVIHDDIIYLEGQKENMEIEIAFQY-TDS 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+++ + YAN+I T +GGTH+ G KA++T+ +N +K +KD D +LSGE VREG+T
Sbjct: 268 FNENIFSYANNIPTTEGGTHVTGFKAAITKVINDYARKINMLKDNDKNLSGEDVREGITA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
II++++ +P+FEGQTKT+LGN +VR+ V+ V E L LE +P I+ KSL++ +A
Sbjct: 328 IINMKLTDPQFEGQTKTKLGNADVRQFVENLVTEKLQYILEENPKTARIIVEKSLASYRA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L ++KS + + SLPGKLADC P E+FIVEGDSAGGSAK GRDRR+Q
Sbjct: 388 REAARKARELTKRKSAMENFSLPGKLADCQEKDPRLCELFIVEGDSAGGSAKMGRDRRYQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL GK+LNVE+ +Y N+++ +I ALG G G+D LRYHK+II+ DADV
Sbjct: 448 AILPLWGKMLNVEKSRADKVYGNDKLTPIITALGAGF-GDDMDLSKLRYHKVIIMADADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV---KSS 476
DG HIRTLLLTFFYRY + L + G +Y+ +PPLYKV +GK+ Y Y+D EL+K+ K
Sbjct: 507 DGHHIRTLLLTFFYRYMRPLIENGHVYIALPPLYKVSKGKEEYYVYNDNELEKLLKEKGW 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
IQRFKGLGEM P QLWETT++P+ R + ++ + + EA +F+ LMG +V+
Sbjct: 567 KRGEGSLIIQRFKGLGEMNPEQLWETTMDPKTRKMLKVDLNNPVEAEEIFTILMGEKVEP 626
Query: 537 RKELIQNAANLVNLDHLDI 555
RKE I A VN +LD+
Sbjct: 627 RKEFIHQYAKKVN--NLDV 643
>gi|153085|gb|AAA73951.1| DNA gyrase B subunit [Staphylococcus aureus]
Length = 640
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 282/552 (51%), Positives = 372/552 (67%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG VSGGLHGVG SVVNALS+ LEV V R+ YHQ Y +G P
Sbjct: 99 VILTVLHAGGKFGGGGY--KVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L V + D+ GT IRF D ++FT +++ T+ RIRELAFLN + I LR
Sbjct: 157 QFDLK----EVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLR 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D E + + Y + GG++ YV+ LN +K+P+HD + + D I +++A+Q+ S
Sbjct: 213 DE-RDEENVREDSYHYEGGIKSYVELLNENKEPIHDEPIYIHQSKDDIEVEIAIQYNS-G 270
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ +L YAN+I T +GGTH +G K +LTR LNS G S+ ++K SGE REG+T
Sbjct: 271 YATNLLTYANNIHTYEGGTHEDGFKRALTRVLNSYGLSSRYEEEK--IASGEDTREGMTA 328
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ +P+FEGQTKT+LGN EVR+VVD+ E+ +L +P V +++ K + A +A
Sbjct: 329 IISIKHGDPQFEGQTKTKLGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARA 388
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR++ R+KS L +SLPGKLADCSS +PEE EIF+VEGDSAGGS K GRD R Q
Sbjct: 389 RVAAKKAREVTRRKSALDVASLPGKLADCSSQSPEECEIFLVEGDSAGGSTKSGRDSRTQ 448
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N EI+ +I A G G+ G DF RYHKI+I+TDADV
Sbjct: 449 AILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGG-DFDLAKARYHKIVIMTDADV 507
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLL FFYR+ + L + G +Y+ PPLYK+ +GKQ Y Y+D EL K+KS
Sbjct: 508 DGAHIRTLLLIFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNP 567
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+SI +KGLGEM QLWETT+NPE R L Q+ +EDA EA+ F LMG V+ R++
Sbjct: 568 TPKWSIALYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ 627
Query: 540 LIQNAANLVNLD 551
I++ A NLD
Sbjct: 628 FIEDNAVYANLD 639
>gi|418678676|ref|ZP_13239950.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|421088474|ref|ZP_15549299.1| DNA gyrase, B subunit [Leptospira kirschneri str. 200802841]
gi|400321866|gb|EJO69726.1| DNA gyrase, B subunit [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410003105|gb|EKO53554.1| DNA gyrase, B subunit [Leptospira kirschneri str. 200802841]
Length = 639
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 370/553 (66%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DHRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNVDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNVGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|375255406|ref|YP_005014573.1| DNA gyrase subunit B [Tannerella forsythia ATCC 43037]
gi|363408013|gb|AEW21699.1| DNA gyrase, B subunit [Tannerella forsythia ATCC 43037]
Length = 652
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/560 (45%), Positives = 365/560 (65%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ + R+G Y Q++S+GKP
Sbjct: 100 VVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSSHLKAEIHRNGKIYIQEFSQGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + DR GT I F PD VFT Q+ ++ +A R+RELAFLN + + L
Sbjct: 158 LGD----IRETGTIDRTGTIISFKPDDTVFTVT-QYKYDILANRLRELAFLNAGIYLTLT 212
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + F GL+E+V++++ K+ + HDV+ + GI +++A+ + +
Sbjct: 213 DKREKKEDGSFKSEVFHSNEGLKEFVRYIDKSKESMIHDVIHIVTEKQGIPVEVAMTYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G+ REGL
Sbjct: 273 -SYNESVFSYVNDINTIEGGTHLSGFRRGLTRTLKKYAEDSKLLEKAKVEIQGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VD +V E L YLE HP +I+ K + A
Sbjct: 332 TAVISIKVAEPQFEGQTKTKLGNNEVMGAVDMAVGEALGYYLEEHPKEAKAIVDKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++KS LPGKLADCSS E E+F+VEGDSAGG+AKQGRDR
Sbjct: 392 TARQAARKAREMVQRKSPFSGGGLPGKLADCSSKDAAECELFLVEGDSAGGTAKQGRDRN 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----ALRYHKIII 413
FQAILPLRGKILNVE+ E ++ +EEIQN+ +A+G+ + ED KE LRY KIII
Sbjct: 452 FQAILPLRGKILNVEKAMEHRIFDSEEIQNIFKAMGVTIGTEDDPKELNLSKLRYQKIII 511
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R + L ++G +Y+ PPLY ++GK +YC+ + + +K
Sbjct: 512 MTDADVDGSHIATLILTFFFRRMRGLIEKGYVYLATPPLYLCKKGKVEEYCWTEQQRQKF 571
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
++ I QR+KGLGEM QLW+TT+NPE R LKQ+ IE+A EA+ F+ LMG
Sbjct: 572 IDTYGGGNESQIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIENAVEADSTFAMLMG 631
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R++ I+ A N+D
Sbjct: 632 EDVAPRRDFIEENATYANID 651
>gi|421106736|ref|ZP_15567300.1| DNA gyrase, B subunit [Leptospira kirschneri str. H2]
gi|410008202|gb|EKO61877.1| DNA gyrase, B subunit [Leptospira kirschneri str. H2]
Length = 639
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 370/553 (66%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DRRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNIGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|340351772|ref|ZP_08674674.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
gi|339616843|gb|EGQ21482.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella pallens
ATCC 700821]
Length = 656
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/566 (46%), Positives = 371/566 (65%), Gaps = 23/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+R+G Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMKSQVFRNGKIYQQEYEQGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD +FTT + F +A R+RELAFLN + I L
Sbjct: 156 LYPVKV----VGETDKTGTRQQFWPDGSIFTTTV-FQWEIVARRMRELAFLNAGIKITLT 210
Query: 121 KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DLRPNSEGKTRQEVFHAKEGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
Y++ + Y N+I TI+GGTH+ G + +LTRTL + +K ++ I ++GE R
Sbjct: 271 -YNENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDPQIAKQIEKAKIEITGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE +P I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSYYLEENPVEAKLICDKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGESDFEANTDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KIII+TDADVDG+HI TL++T FYRY + +EG +Y+ PPLYK K +YCY + +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRYMPRVIEEGHLYIATPPLYKCTYKKVSEYCYTEQQ 569
Query: 470 ----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
L K N QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+A+ A+ +
Sbjct: 570 RLQFLNKYAGGDEENKAVHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIENASTADEM 629
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 630 FSMLMGDDVEPRREFIEQNATYANID 655
>gi|326335208|ref|ZP_08201404.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692616|gb|EGD34559.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 656
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/566 (45%), Positives = 379/566 (66%), Gaps = 22/566 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+SVVNALS L TV+RDG E+ Q+Y RG
Sbjct: 97 VVMTKIGAGGKFDKGS--YKVSGGLHGVGVSVVNALSTHLTATVYRDGKEWQQEYERGVA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + +++GT++ F PD ++F +I+F ++ +A RIRELAFLN + I L
Sbjct: 155 LYS----VKEIGETNKRGTKVTFLPDTEIFQQSIEFSYDILASRIRELAFLNKGIRITLT 210
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+E D K E++ GL E++Q+L+ ++ P+ ++ + + I +++A+ + +
Sbjct: 211 DLREKDDQGKPLSQEFYSEKGLVEFIQYLDGNRPPIISKIISMEGEKNEIPVEVAMVY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKS----KTVKDKD--ISLSGE 231
D++++ + Y N+I T +GGTH++G + LTRTL + KS K KDK + +SG+
Sbjct: 270 DSFNENLHSYVNNINTHEGGTHLQGFRMGLTRTLKNYADKSGLLEKASKDKKNPLEISGD 329
Query: 232 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 291
REGLT IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ +I++
Sbjct: 330 DFREGLTAIISVKVAEPQFEGQTKTKLGNREVTAAVSQAVSEMLESYLEENPEDAKTIVN 389
Query: 292 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 351
K + A +A LAAK+AR+ V++KS + + LPGKLADC PE E+F+VEGDSAGG+AK
Sbjct: 390 KVILAAQARLAAKKAREAVQRKSPMGGAGLPGKLADCQDKNPENCELFLVEGDSAGGTAK 449
Query: 352 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALR 407
QGRD++FQAILPLRGKILNVE+ + + +EEI+N+ ALG+ + ++ K LR
Sbjct: 450 QGRDQKFQAILPLRGKILNVEKAMQHRVLDSEEIRNIYTALGVTIGTDEDSKALNMSKLR 509
Query: 408 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 467
Y+KIII+ DADVDG+HI TL+LTFF+RY + L +EG IY+ PPLY +++GK+ QY + D
Sbjct: 510 YYKIIIMCDADVDGSHIATLILTFFFRYMRELIEEGHIYIATPPLYLLKQGKKEQYAWSD 569
Query: 468 AELKKVKSSFPSNAL--YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
E + + F S A ++QR+KGLGEM QL +TT++P+ R L+++ IE+A EA+ +
Sbjct: 570 EERDAITNEFYSQAQAKVAVQRYKGLGEMNATQLADTTMDPKHRTLRKVTIENAVEADRI 629
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V R+E I+ A N+D
Sbjct: 630 FSMLMGDDVPPRREFIEKNARYANID 655
>gi|345020606|ref|ZP_08784219.1| DNA gyrase subunit B [Ornithinibacillus scapharcae TW25]
Length = 640
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/556 (48%), Positives = 374/556 (67%), Gaps = 20/556 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS +LEV+V RDG + + RG P
Sbjct: 99 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTNLEVSVHRDGKIHMIGFERGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V L V DR GT F PD ++FT +D +T+ R+RELAFLN + I++
Sbjct: 157 VKPLEV----VGETDRTGTTTHFKPDPEIFTETTTYDLDTLVQRVRELAFLNKGIRISI- 211
Query: 121 KEDSDPEKNQYNE----YFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWC 176
E + NE + + GG+ EYV+++N +K+ LH+ + GI +++A+Q+
Sbjct: 212 ------EDKRTNEGPISFHYEGGISEYVEYINRNKEGLHEPFYAEGEDQGIAVEVAVQY- 264
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D ++ ++ +AN+I T +GGTH G K LTR +N +K+ +K+ + +L+G+ VREG
Sbjct: 265 NDGFNSSIYSFANNIHTYEGGTHESGFKTGLTRVINDYARKNGLMKESEPNLTGDDVREG 324
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T I+SV+ P+P+FEGQTKT+LGN EVR + D E +++L +P + I+ K L A
Sbjct: 325 ITAIVSVKHPDPQFEGQTKTKLGNSEVRAITDSVFSEMFSKFLLENPSIGKIIVEKGLMA 384
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+ARDL R+KSVL S+LPGKLADCSS SE++IVEGDSAGGSAKQGRDR
Sbjct: 385 SRARAAAKKARDLTRRKSVLEISNLPGKLADCSSKDASISELYIVEGDSAGGSAKQGRDR 444
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILPLRGKILNVE+ + N E++++I A+G G+ G+DF RYHKI+I+TD
Sbjct: 445 HFQAILPLRGKILNVEKARLDRILSNNEVRSMITAMGTGI-GDDFDISKARYHKIVIMTD 503
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYR+ + L + G +Y+ PPLYKV++GK V Y YDD EL ++ +
Sbjct: 504 ADVDGAHIRTLLLTFFYRFMRPLIEHGYVYIAQPPLYKVQQGKVVHYAYDDKELDRILAE 563
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
P + +QR+KGLGEM QLWETT++PE R L Q+ + DA EA+ VF LMG +V+
Sbjct: 564 LPESPKPGLQRYKGLGEMNAEQLWETTMDPENRTLLQVELSDAIEADHVFDMLMGDKVEP 623
Query: 537 RKELI-QNAANLVNLD 551
R++ I +NA + NLD
Sbjct: 624 RRQFIEENAQYVKNLD 639
>gi|343520664|ref|ZP_08757633.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
gi|343397622|gb|EGV10156.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 393 str. F0440]
Length = 638
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/556 (47%), Positives = 380/556 (68%), Gaps = 21/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF +++ Y VSGGLHGVG+SVVNALSE L V RDG Y Q++SRG
Sbjct: 97 VLTILHAGGKF--NNNAYQVSGGLHGVGVSVVNALSEWLIANVKRDGKLYEQQFSRGNAT 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L V + GT I F PD ++F T I F+ + R RE+AFLN + I
Sbjct: 155 SKLEV----VGTSKETGTIITFKPDSEIFDTTI-FEKEILRNRFREMAFLNKGVKIVFTD 209
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D Y E F + GG++ +V+++N +K LH+ V+ F+ +++++Q+ +D
Sbjct: 210 ERED-----YTETFHYEGGIKSFVEYMNRNKNNLHNEVIYFQGQRGDSQVEISMQY-TDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+I T +GG+H+ G K +LTRTLN G+K +KDK+ +L G+ REGLT
Sbjct: 264 YSENVLTFANNIHTPEGGSHLVGFKTALTRTLNDYGRKYNLIKDKEANLQGDDTREGLTG 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S+++PNP+FEGQTK +LGN E R +V+ + + L +LE +P V ++ K+ S+ +A
Sbjct: 324 IVSIKLPNPQFEGQTKAKLGNSESRGIVETFLYDNLMTFLEENPKVGKIVIEKAQSSARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS+L +++LPGKL+DC + +EI++VEGDSAGGSAKQGRD +FQ
Sbjct: 384 REAARKARDLTRKKSILDNTTLPGKLSDCQESDISVNEIYLVEGDSAGGSAKQGRDSKFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPL+GKI+NVE+ + EEI+++I A G G+ G+DFK + LRY KI+I+TDADV
Sbjct: 444 AVLPLKGKIMNVEKARIDKILGYEEIKSMITAFGTGI-GKDFKLDNLRYGKIVIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFP 478
DGAHIRTL+LTFFYRY + L ++G +Y+ PPLY + +G K V+YC+ D EL+
Sbjct: 503 DGAHIRTLILTFFYRYMRELIEQGHVYIAQPPLYGIIKGVKVVKYCWTDEELQASLDELG 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV--VFSSLMGARVDT 536
++ + IQR+KGLGEM P QLWETT+NPE R+ Q+ I+D ++ FS+LMG +V+
Sbjct: 563 RDS-HRIQRYKGLGEMNPAQLWETTMNPENRLFLQVNIDDEELVSIDETFSTLMGDKVEP 621
Query: 537 RKELI-QNAANLVNLD 551
R+E I QNA + N+D
Sbjct: 622 RREFIEQNAKYVENID 637
>gi|57233676|ref|YP_180759.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
gi|57224124|gb|AAW39181.1| DNA gyrase, B subunit [Dehalococcoides ethenogenes 195]
Length = 642
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/552 (48%), Positives = 367/552 (66%), Gaps = 16/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAG KFGG + Y VSGGLHGVG SVVNAL+E V V R+G Y Q Y RGKP
Sbjct: 104 VMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALAEWTTVKVRRNGKIYQQSYQRGKPS 161
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V D GT F D Q+F+T ++D T+ R+RE+A+LN L + +
Sbjct: 162 TPLE----EVGVSDGSGTTTIFKADSQIFSTT-EYDFETLTDRLREIAYLNKGLEVYIYD 216
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A+Q+ +D Y
Sbjct: 217 EQSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVAIQY-NDGY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD+ L +AN + TIDGGTH+ G +++LTR N KSK +KD D +L G+ VREG+ I
Sbjct: 272 SDSTLTFANCVNTIDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDDVREGIVAI 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K ++A KA
Sbjct: 332 VSVKLPEPQFEGQTKGKLGNIEIKSFVESAVTEQLSLYLEEHPDDTKRILEKCITAAKAR 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQGR+RRFQA
Sbjct: 392 EAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQGRNRRFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++++TDADVD
Sbjct: 452 ILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGID-NDFDPAKLRYNRLVLMTDADVD 510
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE + + S SN
Sbjct: 511 GSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSNEHWVYNDAEKETLLSQTKSN 570
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ IQR+KGLGEM QLW+TT++P R L ++ +EDAA+A+ +F+ LMG V RK
Sbjct: 571 KV-DIQRYKGLGEMSAEQLWKTTMDPASRTLLEVKVEDAAKADQIFNLLMGGEVAPRKAF 629
Query: 541 IQNAANLV-NLD 551
IQ+ + V NLD
Sbjct: 630 IQSHSKTVKNLD 641
>gi|419841535|ref|ZP_14364903.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|386904754|gb|EIJ69539.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 638
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/554 (46%), Positives = 367/554 (66%), Gaps = 10/554 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE EV V R+G Y+QKY RGKP
Sbjct: 91 IVLTVLHAGGKF--ENDNYKVSGGLHGVGISVVNALSEWTEVKVKREGNVYYQKYLRGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + +++ + GT + F PD ++F T I F++ + R++ELA+LN L I L
Sbjct: 149 IEDVKI-ISALEAGETTGTIVTFKPDIEIFETVI-FEYEVLQHRLKELAYLNRGLEINLL 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D E + + F GG+ ++++ + + + L + + + +D+A + +
Sbjct: 207 --DCRNEIGKKESFQFEGGISDFLKEVTQENQTLLSKQIHIEGQAEQVGVDIAFTYTT-G 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
S+ + + N+I T +GG+H+ G + LT+ +N +GK +K+KD L G +REG+
Sbjct: 264 QSEIIYSFVNNINTTEGGSHVTGFRTCLTKVINDIGKNQGFLKEKDGKLQGGDIREGIVA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+VP P+FEGQTKT+LGN EV +V+ + L +LE +P+ I+ K L++ KA
Sbjct: 324 IISVKVPQPQFEGQTKTKLGNSEVSGIVNTVLSTDLKIFLEDNPNDTKLIIEKILNSKKA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+ V +KSVL SLPGKLADCSS PEE EIF+VEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAAQRAREAVLRKSVLEVGSLPGKLADCSSKKPEECEIFLVEGDSAGGSAKQGRDRYFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ +++EI+ ++ A G + E F E LRY KII++TDADV
Sbjct: 444 AILPLKGKILNVEKAGLHKALESDEIRAMVTAFGTNIGEESFDLEKLRYGKIILMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTF YRY L G +Y+ PPLYKV GK ++Y Y D++LK++
Sbjct: 504 DGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKVSFGKSIRYAYTDSQLKEMLQGMEG 563
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y++QR+KGLGEM P QLWETT++PE R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 564 ENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVSIDNAREADMLFDKLMGDKVEPRR 623
Query: 539 ELIQNAANLV-NLD 551
E IQ A V N+D
Sbjct: 624 EFIQEHAEYVKNID 637
>gi|433452726|ref|ZP_20412950.1| DNA gyrase, B subunit [Mycoplasma sp. G5847]
gi|431933537|gb|ELK20112.1| DNA gyrase, B subunit [Mycoplasma sp. G5847]
Length = 634
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/553 (46%), Positives = 364/553 (65%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+RD YHQ +S G
Sbjct: 92 LVFTQLHAGGKF--DSETYKISGGLHGVGASVVNALSLFVEVDVYRDNTHYHQLFSEG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + + QGT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESALEQLGHTELQGTKVKFKPDPEIFKETVIFDYEIIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFVNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K +L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNTKSPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQKAREETRRKSALDSFSLPGKLADCETKDSSIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI+++I A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIITAVGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y DA+L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDAQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKN 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|429124642|ref|ZP_19185174.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
gi|426279415|gb|EKV56438.1| DNA gyrase subunit B [Brachyspira hampsonii 30446]
Length = 636
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/554 (47%), Positives = 359/554 (64%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y VSGGLHGVG+SVVNALS L V +DG Y Q Y RG P
Sbjct: 94 VVMTKLHAGGKFDNET--YKVSGGLHGVGVSVVNALSTELIAEVRKDGKLYRQVYHRGVP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V + GT + F D +F T I +D+ +A R+RELAFLN + I L
Sbjct: 152 EEP----VKEVGTSTSNGTTVTFKADADIFETTI-YDYKILANRLRELAFLNRGIRITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D + NE+++ GG+E ++ LN +KK LHD + K D +++A+Q+ DA
Sbjct: 206 -TDKREAEVVSNEFYYEGGIEMFITHLNENKKALHDKPIYLHKTEDKTDVEVAMQYV-DA 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + Y N+I T +GGTH+ G + +LTR KK + K I+ GE REGL
Sbjct: 264 YNENIFTYCNNINTTEGGTHLVGFRTALTRVYTDFAKKLELDKKNKITFMGEDTREGLVA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
++SV++PNP+FEGQTKT+LGN EVR V ++ V E L +Y +P V+ +IL K +SA +A
Sbjct: 324 VVSVKIPNPQFEGQTKTKLGNTEVRAVTEKLVVEGLNDYFSQNPKVIKAILEKIISAAQA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+ L S SLPGKLADCS ++ E+++VEGDSAGG+AK GRDR FQ
Sbjct: 384 REAARKARDLARRKNALESDSLPGKLADCSEQEVDKCEVYLVEGDSAGGTAKGGRDRHFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVE+ + NE ++ +I ALG GV G F +RY ++II+ DAD+
Sbjct: 444 AILPLRGKVLNVEKARLDKIIDNESLKPIIAALGCGV-GSSFDISKIRYGRVIIMADADI 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQ-VQYCYDDAELKKVKSSFP 478
DG+HIRTLLLTFF+RY + L D G I++ VPPLYK+ K+ Y Y D + K+ S
Sbjct: 503 DGSHIRTLLLTFFFRYMRPLIDLGHIFIAVPPLYKISFDKKNFVYAYSDEQRDKILSE-N 561
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ Y IQR+KGLGEM QLWETT+NPE R++ Q++ EDA +A+ +FS LMG V R+
Sbjct: 562 KDRKYDIQRYKGLGEMNADQLWETTMNPETRLMYQVLTEDAEKADQLFSMLMGDEVKPRR 621
Query: 539 ELIQNAANLV-NLD 551
+ I++ A V NLD
Sbjct: 622 DFIESNARYVKNLD 635
>gi|98990338|gb|ABF60237.1| DNA gyrase subunit B [Entomoplasma freundtii]
Length = 608
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/555 (47%), Positives = 367/555 (66%), Gaps = 14/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALSE ++V V R+G YHQ +S G
Sbjct: 65 LVFTQLHAGGKF--DSDSYKISGGLHGVGASVVNALSEYVDVLVKREGKVYHQVFSHG-- 120
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + +D+ + GT +RF PD +F + FD+ TI ++++LA+LN + I L
Sbjct: 121 -GTKQSALEVIDTTNETGTVVRFKPDPTIFQETVIFDYITIKNKVKQLAYLNKGIEITL- 178
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
D ++ Y F G+ +YV+ N +K+P++ ++ DG+ +++ALQ+ +D
Sbjct: 179 ---IDYRIDKTITYHFPNGILDYVREENANKQPINPNIFYVDGKYDGVEVEVALQYNAD- 234
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSG-EHVREGLT 238
Y+D ++ + N+I T +GGTH +G++ +L RT+N +K K G + ++EG+
Sbjct: 235 YNDNLITFVNNINTHEGGTHEDGIRQALVRTINRYAEKVAKNGAKSAQKFGWDDIKEGMI 294
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
I+S+R +P FEGQTKT+L N +K VD V + E+L P +IL K+ +A K
Sbjct: 295 GILSIRHSDPSFEGQTKTKLSNLNAKKAVDNVVGDAFEEFLMKSPLDAKAILDKNSTAQK 354
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A LAA+RAR+ R+K L + SLPGKLADC + P +E+++VEGDSAGGSAK GR+R F
Sbjct: 355 ARLAAQRAREETRRKGALDTFSLPGKLADCETKDPTIAELYLVEGDSAGGSAKTGRNRFF 414
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGK+LNVE+ EA + N EI++++ A+G G+K ED LRY+KI+I+TDAD
Sbjct: 415 QAILPLRGKVLNVEKVQEARAFSNNEIKSIVTAVGCGIK-EDVNVCKLRYNKIVIMTDAD 473
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK+V Y Y D +L+ K+
Sbjct: 474 VDGAHIRTLLLTFFYRYMKDLVRHGHIYIAQPPLYKIEAGKKVAYAYSDQQLEDFKNGDY 533
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y+IQR+KGLGEM P+QLWETT+NPE R + Q+ +EDAA AN VFS+LMG + R+
Sbjct: 534 KNLRYTIQRYKGLGEMDPLQLWETTMNPEFRTMLQVTLEDAAIANEVFSNLMGEDPELRR 593
Query: 539 ELIQNAANLV-NLDH 552
+ IQ A+ V N+D+
Sbjct: 594 DFIQENASFVENIDY 608
>gi|404393691|ref|ZP_09319331.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
gi|404278784|gb|EHL17450.2| DNA gyrase, B subunit [Eubacteriaceae bacterium CM2]
Length = 641
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/556 (47%), Positives = 380/556 (68%), Gaps = 20/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V ++G Y Q++ G V
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKEGKIYKQEFEYGNAV 156
Query: 62 TTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
T + TC + + GT I F PD+++F I + T+ R+RELAFLN ++I
Sbjct: 157 TDIKQIGTCPL------EETGTCISFLPDEKIFDETI-YSFETLEHRLRELAFLNKGISI 209
Query: 118 ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWC 176
L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG I++A+Q+
Sbjct: 210 TL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY- 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD + +GE +REG
Sbjct: 267 TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENFTGEDIREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P I+ K + +
Sbjct: 327 LTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRS 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGGSAK+GR+
Sbjct: 387 QRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNS 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+ QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRYHKIII++D
Sbjct: 447 QNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSD 505
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y EL++ +
Sbjct: 506 ADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSPEELEQKLNE 565
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ +FS LMG +V+
Sbjct: 566 IGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADEIFSVLMGDKVEP 624
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 625 RRDFIQQNARYVENLD 640
>gi|354611445|ref|ZP_09029401.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
gi|353196265|gb|EHB61767.1| DNA gyrase, B subunit [Halobacterium sp. DL1]
Length = 637
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/547 (48%), Positives = 373/547 (68%), Gaps = 13/547 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V V RDG +Y +K+ RG+P
Sbjct: 94 VILTVLHAGGKFDAKS--YQVSGGLHGVGVSVVNALSERLAVEVERDGGKYREKFERGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
VT L + D GT IRF PD ++F T + FD++T+ R+RELAFLN + I L
Sbjct: 152 VTDLE----RLGDSDDTGTLIRFRPDSEIFET-LDFDYSTLETRLRELAFLNSGVEITLT 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D + + + + + GG+ E+V++LN + LHD V+ F + DGI +++A+Q D
Sbjct: 207 DERGD--EVESSTFKYDGGIREFVEYLNESRDALHDDVIYFEDEDDGIQVEIAMQASDDL 264
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
S T +AN+I T +GGTH+ G K +LTR +N ++ + + D +L GE +REGLT
Sbjct: 265 QSSTH-AFANNINTREGGTHLTGFKTALTRVVNDYANENDLLGELDGENLKGEDIREGLT 323
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN +VR +V+ V E + Y E +PD +++ K++ A K
Sbjct: 324 AVISVKHPDPQFEGQTKTKLGNSDVRGIVEGVVHEGIGTYFEENPDTARAVVLKAVEAAK 383
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC + P+++E+FIVEGDSAGGSAKQGR+ F
Sbjct: 384 ARKAAKKAEELTRRKSALSSTSLPGKLADCQTKDPDDAELFIVEGDSAGGSAKQGRNPEF 443
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL GKILNVE+ + ++EE++++I ALG G+ G++F E LRY I+++TDAD
Sbjct: 444 QAILPLGGKILNVEKHRLDRILEHEELRHIITALGTGI-GDEFDIENLRYKNIVMMTDAD 502
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ K L + G +Y PPLY++ + +A+ +++
Sbjct: 503 VDGAHIRTLLLTFFYRHMKPLLEGGFVYAAQPPLYRIRYRGETYDAMTEADRERIVEEKC 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+QRFKGLGEM P QLW+TT++PE R+LK++ +EDAA A+ +FS LMG V+ RK
Sbjct: 563 DGNPTQVQRFKGLGEMNPQQLWDTTMDPEHRILKRITVEDAAAADKMFSVLMGDAVEPRK 622
Query: 539 ELIQNAA 545
IQ A
Sbjct: 623 RFIQENA 629
>gi|261878836|ref|ZP_06005263.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
gi|270334578|gb|EFA45364.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella bergensis
DSM 17361]
Length = 657
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/567 (46%), Positives = 373/567 (65%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSARMLSQVFRDGKAYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + + D++GTR +FWPD +FTT F + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----IGNTDKRGTRQQFWPDPTIFTTRT-FQWDIVARRMRELAYLNAGIKITLT 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ + E F A GL+E+V++++ + L D V+ + + G+ I++A+ + +D
Sbjct: 211 DLRPNEDGKIRQEVFHAKDGLKEFVRYIDRHRTHLFDDVIYLKTEKQGVPIEVAIMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G + +LTR L + +K ++ + ++GE R
Sbjct: 271 -YSENLHSYVNNINTIEGGTHVTGFRQALTRVLKNYADNDPQIAKQIEKAKVEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V+Q+V E LT YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAVNQAVGEALTNYLEEHPTEAKQICEKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++KSV+ LPGKLADCS+ P+ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARVAARKARESVQRKSVMTGGGLPGKLADCSNKDPKLCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV GED ++ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVDGEDDREANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYR+ + +EG +Y+ PPLYK +GK +YCY++
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKIIEEGHLYIATPPLYKCTYKGKNSEYCYNEG 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A +K + + QR+KGLGEM P QLWETT++P R+LKQ+ IE+AAEA+
Sbjct: 570 QRLAYFQKYANGEEDSKNIHTQRYKGLGEMNPDQLWETTMDPANRLLKQVTIENAAEADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 630 TFSMLMGDDVEPRREFIEANAAYANID 656
>gi|340755275|ref|ZP_08691970.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|421500122|ref|ZP_15947137.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313685793|gb|EFS22628.1| DNA gyrase, B subunit [Fusobacterium sp. D12]
gi|402268886|gb|EJU18245.1| DNA gyrase, B subunit [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 638
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/554 (46%), Positives = 367/554 (66%), Gaps = 10/554 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE EV V R+G Y+QKY RGKP
Sbjct: 91 IVLTVLHAGGKF--ENDNYKVSGGLHGVGISVVNALSEWTEVKVKREGNVYYQKYLRGKP 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + +++ + GT + F PD ++F T I F++ + R++ELA+LN L I L
Sbjct: 149 IEDVKI-ISALEAGETTGTIVTFKPDIEIFETVI-FEYEVLQHRLKELAYLNRGLEINLL 206
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
D E + + F GG+ ++++ + + + L + + + +D+A + +
Sbjct: 207 --DCRNEIGKKESFQFEGGISDFLKEVTQENQTLLSKQIHIEGQAEQVGVDIAFTYTT-G 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
S+ + + N+I T +GG+H+ G + LT+ +N +GK +K+KD L G +REG+
Sbjct: 264 QSEIIYSFVNNINTTEGGSHVTGFRTCLTKVINDIGKSQGFLKEKDGKLQGGDIREGIVA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+VP P+FEGQTKT+LGN EV +V+ + L +LE +P+ I+ K L++ KA
Sbjct: 324 IISVKVPQPQFEGQTKTKLGNSEVSGIVNTVLSTDLKIFLEDNPNDTKLIIEKILNSKKA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RAR+ V +KSVL SLPGKLADCSS PEE EIF+VEGDSAGGSAKQGRDR FQ
Sbjct: 384 REAAQRAREAVLRKSVLEVGSLPGKLADCSSKKPEECEIFLVEGDSAGGSAKQGRDRYFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ +++EI+ ++ A G + E F E LRY KII++TDADV
Sbjct: 444 AILPLKGKILNVEKAGLHKALESDEIRAMVTAFGTNIGEESFDLEKLRYGKIILMTDADV 503
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTL+LTF YRY L G +Y+ PPLYKV GK ++Y Y D++LK++
Sbjct: 504 DGAHIRTLILTFLYRYMVDLIHNGNVYIAQPPLYKVSFGKSIRYAYTDSQLKEMLQGMEG 563
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y++QR+KGLGEM P QLWETT++PE R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 564 ENKKYTLQRYKGLGEMNPEQLWETTMDPEARLLLKVSIDNAREADMLFDKLMGDKVEPRR 623
Query: 539 ELIQNAANLV-NLD 551
E IQ A V N+D
Sbjct: 624 EFIQEHAEYVKNID 637
>gi|418694207|ref|ZP_13255248.1| DNA gyrase, B subunit [Leptospira kirschneri str. H1]
gi|409958000|gb|EKO16900.1| DNA gyrase, B subunit [Leptospira kirschneri str. H1]
Length = 639
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 370/553 (66%), Gaps = 11/553 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKVYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVQ---IQGDSSER-GTIVRFKPDATIFTT-VDFQFDVLSARFRELAFLNKGLVLVVE 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+ Y
Sbjct: 208 DRRRGKENILRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SETY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLTC 239
++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE V+EGLT
Sbjct: 267 TENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDSALSKKHPTGLSGEDVKEGLTA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + + KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSAKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAHSELYLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDAD+
Sbjct: 447 AILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDADI 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ + +
Sbjct: 507 DGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNVGA 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V RK+
Sbjct: 567 EKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNVLMGDEVQPRKQ 625
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 626 FIEVNAAKVANLD 638
>gi|28896290|ref|NP_802640.1| DNA gyrase subunit B [Streptococcus pyogenes SSI-1]
gi|161485752|ref|NP_664280.2| DNA gyrase subunit B [Streptococcus pyogenes MGAS315]
gi|342164970|sp|P0DG04.1|GYRB_STRP3 RecName: Full=DNA gyrase subunit B
gi|342164971|sp|P0DG05.1|GYRB_STRPQ RecName: Full=DNA gyrase subunit B
gi|28811541|dbj|BAC64473.1| putative DNA gyrase B subunit [Streptococcus pyogenes SSI-1]
Length = 650
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/557 (46%), Positives = 377/557 (67%), Gaps = 17/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFGG S Y VSGGLHGVG SVVNALS L+V V+++G ++Q++ RG V
Sbjct: 103 VFTVLHAGGKFGGGS--YKVSGGLHGVGSSVVNALSTQLDVRVYKNGQIHYQEFKRGAVV 160
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + + D GT + F PD ++FT QFD++ +A RI+ELAFLN L I++
Sbjct: 161 ADLEV----IGTTDVTGTTVHFTPDPEIFTETTQFDYSVLAKRIQELAFLNRGLKISITD 216
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAY 180
+ S E+ ++ + + GG+ YV++LN K + + + +++GI +++A+Q+ + +Y
Sbjct: 217 KRSGMEQEEH--FHYEGGIGSYVEFLNDKKDVIFETPIYTDGELEGIAVEVAMQYTT-SY 273
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+T++ +AN+I T +GGTH +G +A+LTR +N KK+K +K+ + +L+GE VREGLT +
Sbjct: 274 QETVMSFANNIHTHEGGTHEQGFRAALTRVINDYAKKNKILKENEDNLTGEDVREGLTAV 333
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +L +P V I+ K + A KA
Sbjct: 334 ISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFQRFLLENPQVARKIVEKGILASKAR 393
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAKRAR++ R+KS L S+LPGKLADCSS ++E+FIVEGDSAGGSAK GR+R FQA
Sbjct: 394 IAAKRAREVTRKKSGLEISNLPGKLADCSSNDANQNELFIVEGDSAGGSAKSGRNREFQA 453
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++I+TDADVD
Sbjct: 454 ILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLVIMTDADVD 512
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCY----DDAELKKVKS 475
GAHIRTLLLT YR+ + + + G +Y+ PP+Y V+ G ++ +Y + +LK
Sbjct: 513 GAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVGSEIKEYIQPGIDQEDQLKTALE 572
Query: 476 SFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ + ++QR+KGLGEM QLWETT++PE R++ ++ ++DAAEA+ VF LMG RV
Sbjct: 573 KYSIGRSKPTVQRYKGLGEMDDHQLWETTMDPENRLMARVTVDDAAEADKVFDMLMGDRV 632
Query: 535 DTRKELIQNAANLVNLD 551
+ R++ I+ A LD
Sbjct: 633 EPRRDFIEENAVYSTLD 649
>gi|288801620|ref|ZP_06407062.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
gi|288335662|gb|EFC74095.1| DNA gyrase, B subunit [Prevotella melaninogenica D18]
Length = 655
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/567 (46%), Positives = 378/567 (66%), Gaps = 26/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D+ GTR +FWPD ++FTT + + +A R+RELA+LN + I L
Sbjct: 156 LYPVKV----VGETDKTGTRQQFWPDPEIFTTTV-YQWAIVARRMRELAYLNAGIKITLS 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
DPE + E F A GL+E+V++++ ++ L D V+ + + I I++A+ + +
Sbjct: 211 DLRPDPETGKTRTEVFHAKDGLKEFVRYVDRHRQHLFDDVIYLKTEKQNIPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D Y++ + Y N+I TI+GGTH++G +A+LTRTL + SK ++ I ++GE
Sbjct: 271 D-YTENIHSYVNNINTIEGGTHLQGFRAALTRTLKTYADNDPQISKQLEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT+YLE HP+ I +K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTDYLEEHPNEAKMICNKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARVAARKARESVQRKNVMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGE-DFKK--EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE DF+ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVQRHRVFEAESVMNIIQSIGVRFGVEGEGDFEANTDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD- 467
KIII+TDADVDG+HI TL++T FYRY + ++G +Y+ PPLYK K +YCY +
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFYRYMPKVIEQGHLYIATPPLYKCTYKKVSEYCYTEQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A + K + + QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+ + +
Sbjct: 570 QRQAFIDKYANGDEEDKAIHTQRYKGLGEMNPEQLWETTMDPKTRLLKQVTIEN--DVDD 627
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 628 IFSMLMGDDVEPRREFIEKNATYANID 654
>gi|448298517|ref|ZP_21488545.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
gi|445591187|gb|ELY45393.1| DNA gyrase subunit B [Natronorubrum tibetense GA33]
Length = 643
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/548 (47%), Positives = 371/548 (67%), Gaps = 9/548 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LE V RDG + + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSERLEAEVRRDGAVFRHAFETGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + V ++ + GT++RFW D +F A +F +T++ R+RELAFLN + I LR
Sbjct: 152 VGDME-RVRDMEPDEETGTQVRFWADTDIFE-ADEFSFSTLSNRLRELAFLNSGVRITLR 209
Query: 121 KEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
E + ++ + Y + GG+ E+V++LN + +HD ++ F + I I++A+Q +
Sbjct: 210 DEREQTDDGEFVADTYEYDGGIREFVEYLNETRSAMHDDIIYFEDEEQNIQIEVAMQ-AT 268
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+ ++ +AN+I T +GGTH+ G K +LTRT+N + + D + +L+GE +REGL
Sbjct: 269 EELQGSIHAFANNINTREGGTHLTGFKTALTRTVNDYAGDNGLLSDLEENLTGEDIREGL 328
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++ P+P+FEGQTKT+LGN EVR +V+ ++ E L Y E HPD +I+ K++ A
Sbjct: 329 TAVISIKHPDPQFEGQTKTKLGNSEVRGIVESAMHEGLGTYFEEHPDTAQAIVMKAVEAA 388
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++A +L R+KS L S+SLPGKLADC + P+E+E+FI EGDSAGGSAKQ R+
Sbjct: 389 KARKAARKAEELTRRKSALDSTSLPGKLADCQTKDPDEAELFIAEGDSAGGSAKQARNPD 448
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
+QAILP++GKILNVE+ + +N+EI+N+I A+G G+ G++F + +RY KII+ TDA
Sbjct: 449 YQAILPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDIDDVRYKKIIMATDA 507
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTL+LTFFYR+ + L + G +Y PPLY+V + +AE ++
Sbjct: 508 DVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRVRYRGETYDAMTEAERDEIVEEK 567
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+QRFKGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+ +FS LMG V+ R
Sbjct: 568 CDGNPTQVQRFKGLGEMNPEQLWETTMNPENRILKQITIEDAAAADKMFSVLMGDAVEPR 627
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 628 KQFIKDHA 635
>gi|385838590|ref|YP_005876220.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
gi|358749818|gb|AEU40797.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris A76]
Length = 651
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/534 (46%), Positives = 365/534 (68%), Gaps = 14/534 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV
Sbjct: 180 PDPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYV 238
Query: 145 QWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G
Sbjct: 239 EYLNENKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGF 297
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+ +LTR +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV
Sbjct: 298 RTALTRVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEV 357
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+V++ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPG
Sbjct: 358 TGIVNKLFAEALTTFMLENPKVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPG 417
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NE
Sbjct: 418 KLADCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANE 477
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 478 EIRSLFTAMGTGFGG-DYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 536
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPV 497
+Y+ PP+Y ++ G + + E L++ + + ++QR+KGLGEM
Sbjct: 537 YVYIAQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDH 596
Query: 498 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
QLWETT++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 597 QLWETTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|116511733|ref|YP_808949.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|125624430|ref|YP_001032913.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris MG1363]
gi|389854795|ref|YP_006357039.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
gi|116107387|gb|ABJ72527.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11]
gi|124493238|emb|CAL98205.1| topoisomerase IV subunit B [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071217|gb|ADJ60617.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000]
Length = 651
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/534 (46%), Positives = 365/534 (68%), Gaps = 14/534 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV
Sbjct: 180 PDPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYV 238
Query: 145 QWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G
Sbjct: 239 EYLNENKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGF 297
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+ +LTR +N+ K++K +K+ + +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV
Sbjct: 298 RTALTRVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEV 357
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+V++ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPG
Sbjct: 358 TGIVNKLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPG 417
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NE
Sbjct: 418 KLADCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANE 477
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 478 EIRSLFTAMGTGFGG-DYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 536
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPV 497
+Y+ PP+Y ++ G + + E L++ + + ++QR+KGLGEM
Sbjct: 537 YVYIAQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDH 596
Query: 498 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
QLWETT++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 597 QLWETTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|257885591|ref|ZP_05665244.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501]
gi|257821447|gb|EEV48577.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501]
Length = 648
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/533 (48%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFT 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV
Sbjct: 179 PDPEIFTETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYEGGIKSYV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 237 EYLNANKTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPG
Sbjct: 356 RTVTDRLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 416 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 476 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QL
Sbjct: 535 YVYIAQPPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 595 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|359729025|ref|ZP_09267721.1| DNA gyrase subunit B [Leptospira weilii str. 2006001855]
gi|417780198|ref|ZP_12427964.1| DNA gyrase, B subunit [Leptospira weilii str. 2006001853]
gi|410779665|gb|EKR64277.1| DNA gyrase, B subunit [Leptospira weilii str. 2006001853]
Length = 641
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/555 (46%), Positives = 375/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+++ + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSSVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIVE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ S+ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGSEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P + IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPSITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|187934052|ref|YP_001884271.1| DNA gyrase subunit B [Clostridium botulinum B str. Eklund 17B]
gi|187722205|gb|ACD23426.1| DNA gyrase, B subunit [Clostridium botulinum B str. Eklund 17B]
Length = 635
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/554 (49%), Positives = 386/554 (69%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE VTV R+G + Q+YS+GK
Sbjct: 95 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCIVTVKREGHIWKQEYSKGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ L + + + GT I F PD ++F + FD +T++ R+RELAFLN + I L
Sbjct: 153 LYDLK----QIGNTEESGTTIYFKPDAEIFDEVL-FDFDTLSQRLRELAFLNKGINIKLI 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
+D E+N Y++ GG++ +V +LN +K PLH + + + D +T++L LQ+ +D
Sbjct: 208 DSRNDREEN----YYYEGGIKSFVSYLNRNKTPLHPEPIYVEGIKDKVTVELGLQY-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K +LTR N K+ +K+ D + SG+ +REGLT
Sbjct: 263 YTENLFSFANNIDTIEGGTHLVGFKTALTRAFNDYAKRFGFIKENDKNFSGDDIREGLTA 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EV+ +VD V EY+ +LE +P + I+ K+L A +A
Sbjct: 323 VISVKIEDPQFEGQTKTKLGNSEVKGIVDSIVSEYIGIFLEENPGISKIIIDKALMAARA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R KSVL ++LPGKLADCSS P E EI+IVEGDSAGGSAKQGRDR+FQ
Sbjct: 383 REAARKARELTR-KSVLERTTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQGRDRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + +E I++++ A G G+ G+DF E +RY++III+TDADV
Sbjct: 442 AILPLRGKIMNVEKQRLDKILNSETIRSMVTAFGGGI-GKDFDIEKIRYNRIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L ++G +Y+ PPL++V +GK+ Y Y D+EL +V
Sbjct: 501 DGAHIRTLLLTFFYRYMRELVEQGHVYIAQPPLFRVGKGKKEVYAYSDSELDQVLLDMGG 560
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT++P +R+L + IEDA A+ +F+ LMG +V+ R+
Sbjct: 561 KDTSVDIQRYKGLGEMNATQLWDTTMDPAKRILLKAEIEDAMAADEIFTILMGEKVEPRR 620
Query: 539 ELI-QNAANLVNLD 551
E I QNA N+VNLD
Sbjct: 621 EFIEQNAKNVVNLD 634
>gi|116332686|ref|YP_794213.1| DNA gyrase, B subunit [Lactobacillus brevis ATCC 367]
gi|116098033|gb|ABJ63182.1| DNA gyrase subunit B [Lactobacillus brevis ATCC 367]
Length = 647
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/532 (48%), Positives = 344/532 (64%), Gaps = 14/532 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHV----LPVDSKDRQGTR 80
LHGVG SVVNALS LE V RDG Y + G T + HV LP +D+ GT
Sbjct: 124 LHGVGASVVNALSTDLEAQVTRDGKTYAIAFDHGHVKTPM--HVIKEGLP---QDQHGTA 178
Query: 81 IRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGL 140
+ F PD +F FD T+ RIRELAFLN L I +R D PEK ++ + GG+
Sbjct: 179 VHFLPDPDIFRETTVFDIKTLTTRIRELAFLNKGLRITIR--DERPEKPTEEDFLYEGGI 236
Query: 141 EEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTH 199
YV +LN +K+ L + + +GIT+++ALQ+ D Y + +L + N+I T +GGTH
Sbjct: 237 RHYVDYLNENKETLFEPPIYVEGQENGITVEVALQYTDD-YHNNLLTFTNNIHTYEGGTH 295
Query: 200 IEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLG 259
EG K +LTR +N +++K +KD + +L+G+ VREGLT ++SV+ P+P+FEGQTKT+LG
Sbjct: 296 EEGFKRALTRVVNDYARQNKLMKDNEANLTGDDVREGLTAVVSVKHPDPQFEGQTKTKLG 355
Query: 260 NPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSS 319
N + R VD + ++ ++ HPDV I+ K A KA +AAKRAR++ R+KS L S
Sbjct: 356 NSDARTAVDHTFADHFMRFMMEHPDVARKIVDKGTLASKARVAAKRAREVTRKKSGLEIS 415
Query: 320 SLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAM 379
+LPGKLAD +S PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ +
Sbjct: 416 NLPGKLADNTSKDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDRI 475
Query: 380 YKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTL 439
NEEI++L A+G G G DF + YHK+I++TDADVDGAHIRTLLLT YRY + L
Sbjct: 476 LANEEIRSLFTAMGTGF-GNDFDVSKVNYHKLILMTDADVDGAHIRTLLLTLVYRYMRPL 534
Query: 440 FDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
D G +Y+ PPLY+V +GK +Y D ELK + P + IQR+KGLGEM QL
Sbjct: 535 LDAGFVYIACPPLYRVRQGKMQRYLDSDEELKDLLGQLPPSPKPQIQRYKGLGEMDAEQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
WETT+NPE R L ++ +DA A+ VF+ LMG +V R+E I+N A LD
Sbjct: 595 WETTMNPENRRLLRVDAQDAINADQVFTMLMGDKVAPRREFIENNATFAELD 646
>gi|339626334|ref|YP_004717977.1| DNA topoisomerase IV subunit B [Sulfobacillus acidophilus TPY]
gi|379005805|ref|YP_005255256.1| DNA gyrase subunit B [Sulfobacillus acidophilus DSM 10332]
gi|339284123|gb|AEJ38234.1| DNA topoisomerase IV, B subunit [Sulfobacillus acidophilus TPY]
gi|361052067|gb|AEW03584.1| DNA gyrase subunit B [Sulfobacillus acidophilus DSM 10332]
Length = 638
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/529 (50%), Positives = 369/529 (69%), Gaps = 13/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVGLSVVNALS+ L T +G + Q Y++GKP+ LT + D G + F
Sbjct: 118 LHGVGLSVVNALSKELTATSRFNGGIFVQHYAQGKPLDALT----RIGDTDETGFEVVFL 173
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD +F ++F TIA R+RE AFLN + + L+ E S E Y + GG+ +V
Sbjct: 174 PDPDIFE-EVRFSFETIANRLREQAFLNSGVLLELKDEASGREM----RYHYTGGVVSFV 228
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
Q+LN ++ +H + F + DG+ ++ ALQ+ +D+Y++T+ +AN+IRT++GG+H G
Sbjct: 229 QYLNLNRDVIHPKPIAFSAERDGVFVETALQY-NDSYTETLFTFANTIRTLEGGSHEAGF 287
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
KA+LTR N G+K +KD D +LSG+ VREGLT I+SV++P P+FEGQTKT+LGN EV
Sbjct: 288 KAALTRVCNDYGRKLGLLKDADNNLSGDDVREGLTMILSVKLPEPQFEGQTKTKLGNSEV 347
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R + + V E L+ Y E +P + IL K+++A +A AA++AR+L R+KSVL SSSLPG
Sbjct: 348 RGITEAIVAEGLSTYFEENPSIAKRILEKAIAAARAREAARKARELTRRKSVLESSSLPG 407
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KL DC+S P ESE+F+VEGDSAGGSAKQGRDR+FQA+LPLRGKILNVER + NE
Sbjct: 408 KLTDCTSKDPAESELFLVEGDSAGGSAKQGRDRQFQAVLPLRGKILNVERARLDKILGNE 467
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I A+G G+ G++F RYH+I+I+TDADVDG+HIRTLLLTFFYRY L + G
Sbjct: 468 EIRAMITAIGTGI-GDEFDLTKARYHRIVIMTDADVDGSHIRTLLLTFFYRYMTPLIEAG 526
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLY V++GKQ +Y YDDA L+++ + + +IQR+KGLGEM QL +TT
Sbjct: 527 YVYIAQPPLYLVKKGKQERYLYDDAALEQLLNEWGRGNDITIQRYKGLGEMNAEQLRDTT 586
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
+NPE R L ++ +EDAA A+ +F+ LMG +V++R++ IQ A+LV NLD
Sbjct: 587 MNPETRTLLRVELEDAAAADWIFTVLMGDKVESRRDFIQEHAHLVRNLD 635
>gi|431081762|ref|ZP_19495852.1| DNA gyrase subunit B [Enterococcus faecium E1604]
gi|431116731|ref|ZP_19497997.1| DNA gyrase subunit B [Enterococcus faecium E1613]
gi|430565694|gb|ELB04840.1| DNA gyrase subunit B [Enterococcus faecium E1604]
gi|430568511|gb|ELB07558.1| DNA gyrase subunit B [Enterococcus faecium E1613]
Length = 648
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/533 (48%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFM 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV
Sbjct: 179 PDPEIFTETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYDGGIKSYV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 237 EYLNANKTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPG
Sbjct: 356 RTVTDRLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 416 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 476 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QL
Sbjct: 535 YVYIAQPPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 595 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|448352648|ref|ZP_21541429.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
gi|445641927|gb|ELY94998.1| DNA gyrase subunit B [Natrialba hulunbeirensis JCM 10989]
Length = 643
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/549 (47%), Positives = 367/549 (66%), Gaps = 11/549 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LE TV RDG Y + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLETTVKRDGGVYEHAFEIGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ + V ++ + GT I+FWPD +F TT + F +T++ R+RELAFLN + I L
Sbjct: 152 IGDME-RVRDMEPDEETGTEIQFWPDDDIFETTDMSF--STLSNRLRELAFLNSGVRITL 208
Query: 120 RKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R E E + Y + GG+ E+V++LN + +H D++ F + + +++A+Q
Sbjct: 209 RDERERTEDGEAVAETYEYEGGIREFVEYLNETRSAMHEDIIYFEDEDQNVRVEVAMQ-A 267
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D + +L GE +REG
Sbjct: 268 TQELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYGNENNLLSDIEENLKGEDIREG 327
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E HPD +I+ K++ A
Sbjct: 328 LTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDCLGTYFEEHPDTAQAIVMKAVEA 387
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 388 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNP 447
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQA+LP++GKILNVE+ + +N+EI+N+I +G G+ G++F E +RY KII+ TD
Sbjct: 448 EFQAVLPIKGKILNVEKHRLDRILENDEIRNMITGIGAGI-GDEFDVEDVRYKKIIMATD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + DAE ++
Sbjct: 507 ADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDAERDEIVEE 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LMG V+
Sbjct: 567 KCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLMGDAVEP 626
Query: 537 RKELIQNAA 545
RK+ I+ A
Sbjct: 627 RKQFIKENA 635
>gi|289579993|ref|YP_003478459.1| DNA gyrase subunit beta [Natrialba magadii ATCC 43099]
gi|448281231|ref|ZP_21472538.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
gi|289529546|gb|ADD03897.1| DNA gyrase, B subunit [Natrialba magadii ATCC 43099]
gi|445579161|gb|ELY33557.1| DNA gyrase subunit B [Natrialba magadii ATCC 43099]
Length = 643
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/549 (47%), Positives = 367/549 (66%), Gaps = 11/549 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LE TV RDG Y + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSRLETTVKRDGGVYEHAFEIGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
+ + V ++ + GT I+FWPD +F TT + F +T++ R+RELAFLN + I L
Sbjct: 152 IGDME-RVRDMEPDEETGTEIQFWPDDDIFETTDMSF--STLSNRLRELAFLNSGVRITL 208
Query: 120 RKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R E E + Y + GG+ E+V++LN + +H D++ F + + +++A+Q
Sbjct: 209 RDERERTEDGEAVAETYEYEGGIREFVEYLNETRSAMHEDIIYFEDEDQNVRVEVAMQ-A 267
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D + +L GE +REG
Sbjct: 268 TQELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYGNENNLLSDIEENLKGEDIREG 327
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E HPD +I+ K++ A
Sbjct: 328 LTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDCLGTYFEEHPDTAQAIVMKAVEA 387
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 388 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNP 447
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQA+LP++GKILNVE+ + +N+EI+N+I A+G G+ G++F E +RY KII+ TD
Sbjct: 448 EFQAVLPIKGKILNVEKHRLDRILENDEIRNMITAIGAGI-GDEFDVEDVRYKKIIMATD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + D E ++
Sbjct: 507 ADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDVERDEIVEE 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LMG V+
Sbjct: 567 KCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLMGDAVEP 626
Query: 537 RKELIQNAA 545
RK+ I+ A
Sbjct: 627 RKQFIKENA 635
>gi|78707345|gb|ABB46478.1| DNA gyrase subunit B [Acholeplasma equifetale]
gi|78707347|gb|ABB46479.1| DNA gyrase subunit B [Acholeplasma equifetale]
Length = 588
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/528 (49%), Positives = 349/528 (66%), Gaps = 16/528 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+T LHAGGKF S Y VSGGLHGVG SVVN LS V + +DG Y QKY RG P
Sbjct: 75 ILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSVWYVVEIHKDGKIYEQKYERGIPA 132
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + +R GT F D +FT +D T+ RI++LAFLN +TI+L
Sbjct: 133 YDLK----ELGETNRTGTITTFKADPLIFTETTVYDIETLRTRIQQLAFLNRGITISL-- 186
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
DS E + Y E F + GG+ EYV++LN +KK +H D++ F K+ DG+T+++A+Q+ D
Sbjct: 187 SDSRDENHIYQETFKYDGGIIEYVKFLNQNKKTIHPDIIYFEKEQDGVTVEVAMQYV-DT 245
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + + N+I T +GG H +G K +LTR ++ K KD ++ GE REGLT
Sbjct: 246 YTPNIHSFTNNISTTEGGMHEDGYKMALTRVISRYADDMKAKKDD--AIIGEDTREGLTA 303
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IISV+ P P+FEGQTKT+LGNPEVR + Q QE L +L +P SI+ K + A +A
Sbjct: 304 IISVKHPEPQFEGQTKTKLGNPEVRAITSQVTQEALERFLLENPQQAKSIVEKVIEATRA 363
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+A+++A++L R+KS L KLADC S PE+SE+FIVEGDSAGGSAKQGRD FQ
Sbjct: 364 RVASRKAKELARRKSPLDQLDFASKLADCRSKDPEKSELFIVEGDSAGGSAKQGRDSEFQ 423
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVE+ M KN+EI N+I+A+G G+ E+F LRYHKI+I+TDADV
Sbjct: 424 AILPLRGKVLNVEKARIDTMLKNKEIINIIQAIGTGI-SEEFDISKLRYHKIVIMTDADV 482
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFF+R+ + L + G IY PPLYKV G+ V+Y Y D EL ++ S +
Sbjct: 483 DGAHIRTLLLTFFFRHMRPLIENGHIYAAQPPLYKVSYGRNVKYAYSDEELNEITSKLET 542
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
++QR+KGLGEM QLW+TT+NPE R L Q+ ++DA EA+ +F+
Sbjct: 543 KP--TLQRYKGLGEMNYEQLWDTTMNPETRTLLQIQLDDAIEADQIFT 588
>gi|398344114|ref|ZP_10528817.1| DNA gyrase subunit B [Leptospira inadai serovar Lyme str. 10]
Length = 637
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/553 (46%), Positives = 373/553 (67%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V++ G ++QKY++G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEWLEVEVYQRGKIHYQKYAKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
++ + + +GT +RF PD +FTT +F ++ + R RELAFLN L + ++
Sbjct: 153 QGPVSI----IGDSEARGTVVRFKPDATIFTTT-EFQYDVLTTRFRELAFLNKGLKLIVK 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
D+ + + +++ F GG+ +V++LN +K PLH + F ++ D + ++A+Q+ SD Y
Sbjct: 208 --DTRKAEIEEHDFLFDGGIVSFVEYLNENKHPLHKTIHFERNKDDVVAEIAIQY-SDTY 264
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKT-VKDKDISLSGEHVREGLTC 239
S+ + + N+I GGTH+EG +A+LTRTLN KK + VK + LSG+ ++EGLT
Sbjct: 265 SENIFCFTNNINNSLGGTHLEGFRAALTRTLNDFLKKDQQLVKKQPTGLSGDDLKEGLTA 324
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++P P+F QTK +L N E++ ++ E L+ + E +P V IL K + A KA
Sbjct: 325 VISVKIPQPQFNSQTKEKLVNAEIKGIMQTLTGEGLSLFFEENPSVTKKILEKCILAAKA 384
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+K+VL LPGKLADCS P SE++IVEGDSAGGSAKQGRDR +Q
Sbjct: 385 REAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAGSELYIVEGDSAGGSAKQGRDRNYQ 444
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + NEEI+ L+ ALG G+ ++F + +RYHKI I+TDAD+
Sbjct: 445 AILPLKGKILNVEKSRLDKILGNEEIRTLVSALGTGIGEDEFNIDKIRYHKIFIMTDADI 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY K + ++G +YV PPLY + GK Y Y D E ++ + +
Sbjct: 505 DGSHIRTLLLTFFFRYMKAVIEKGFLYVAQPPLYLIRHGKTATYLYSDKEKEEYLKTIGT 564
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ IQR+KGLGEM P QLWETT++PE+R++ ++ ++D EA F+ LMG V R+
Sbjct: 565 DKAV-IQRYKGLGEMNPEQLWETTMDPEKRVVLKVKLDDYVEAEDTFNILMGDEVVPRRR 623
Query: 540 LIQ-NAANLVNLD 551
I+ NAA + NLD
Sbjct: 624 FIEVNAAKVANLD 636
>gi|335048216|ref|ZP_08541236.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
gi|333758016|gb|EGL35574.1| DNA gyrase, B subunit [Parvimonas sp. oral taxon 110 str. F0139]
Length = 638
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/556 (47%), Positives = 379/556 (68%), Gaps = 21/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF +++ Y VSGGLHGVG+SVVNALSE L V RDG Y Q++SRG
Sbjct: 97 VLTILHAGGKF--NNNAYQVSGGLHGVGVSVVNALSEWLIANVKRDGKLYEQQFSRGNAT 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L V + GT I F PD ++F T I ++ + R RE+AFLN + I
Sbjct: 155 SKLEV----VGTSKETGTIITFKPDSEIFDTTI-YEKEILRNRFREMAFLNKGVKIIFTD 209
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E D + E F + GG++ +V+++N +K LH +V+ F+ +++++Q+ +D
Sbjct: 210 ERED-----FTETFHYEGGIKSFVEYMNRNKNSLHSEVIYFQGQRGDSQVEISMQY-TDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+I T +GG+H+ G K +LTRTLN G+K +KDKD +L G+ REGLT
Sbjct: 264 YSENVLTFANNIHTPEGGSHLVGFKTALTRTLNDYGRKYNLIKDKDANLQGDDTREGLTG 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S+++PNP+FEGQTK +LGN E R +V+ + + L +LE +P V I+ K+ S+ +A
Sbjct: 324 IVSIKLPNPQFEGQTKAKLGNSESRGIVEAFLYDNLMTFLEENPKVGKIIIEKAQSSARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS+L +++LPGKL+DC + +EI++VEGDSAGGSAKQGRD +FQ
Sbjct: 384 REAARKARDLTRKKSILDNTTLPGKLSDCQESDISVNEIYLVEGDSAGGSAKQGRDSKFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPL+GKI+NVE+ + EEI+++I A G G+ G+DF + LRY KI+I+TDADV
Sbjct: 444 AVLPLKGKIMNVEKARIDKILGYEEIKSMITAFGTGI-GKDFNLDNLRYGKIVIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFP 478
DGAHIRTL+LTFFYRY K L ++G +Y+ PPLY + +G K V+YC+ D EL+
Sbjct: 503 DGAHIRTLILTFFYRYMKELIEQGHVYIAQPPLYGIIKGVKVVKYCWTDEELQASLDELG 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV--VFSSLMGARVDT 536
++ + IQR+KGLGEM P QLWETT+NPE R+ Q+ I+D ++ FS+LMG +V+
Sbjct: 563 RDS-HRIQRYKGLGEMNPAQLWETTMNPENRLFLQVNIDDEELVSIDETFSTLMGDKVEP 621
Query: 537 RKELI-QNAANLVNLD 551
R+E I QNA + N+D
Sbjct: 622 RREFIEQNAKYVENID 637
>gi|421095355|ref|ZP_15556068.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. 200801926]
gi|410362065|gb|EKP13105.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. 200801926]
gi|456887452|gb|EMF98498.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. 200701203]
Length = 614
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 68 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 126 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIIE 180
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ S+ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 181 DRRRGSEGESLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 239
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 240 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 299
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 300 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 359
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 360 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 419
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 420 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNINKIRYHKIMIMTDA 479
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 480 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 539
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 540 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 598
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 599 KQFIEINAAKVANLD 613
>gi|170760652|ref|YP_001785341.1| DNA gyrase subunit B [Clostridium botulinum A3 str. Loch Maree]
gi|169407641|gb|ACA56052.1| DNA gyrase, B subunit [Clostridium botulinum A3 str. Loch Maree]
Length = 637
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/554 (50%), Positives = 385/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE EV V R+G + QK+ RG
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCEVEVRREGHIWKQKFERGIT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEDHGTKIYFKPDIEIFD-ELEFEYDTLAQRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A+Q+ +D
Sbjct: 209 DERYDKKEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDIDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F + +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFDIDKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL +
Sbjct: 503 DGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIFKAKKEIYVYSDPELDEALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLW+TT+NPE R L Q+ IEDA A+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVTIEDAMAADEIFTILMGTKVEPRR 622
Query: 539 ELIQ-NAANLVNLD 551
E I+ NA +VNLD
Sbjct: 623 EFIEDNADKVVNLD 636
>gi|69246710|ref|ZP_00604078.1| DNA gyrase, B subunit [Enterococcus faecium DO]
gi|227550644|ref|ZP_03980693.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330]
gi|257878650|ref|ZP_05658303.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933]
gi|257881316|ref|ZP_05660969.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502]
gi|257888091|ref|ZP_05667744.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733]
gi|257890533|ref|ZP_05670186.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410]
gi|257893108|ref|ZP_05672761.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408]
gi|257896291|ref|ZP_05675944.1| DNA gyrase B subunit [Enterococcus faecium Com12]
gi|257899275|ref|ZP_05678928.1| DNA gyrase B subunit [Enterococcus faecium Com15]
gi|260558231|ref|ZP_05830427.1| DNA gyrase B subunit [Enterococcus faecium C68]
gi|261206921|ref|ZP_05921610.1| DNA gyrase B subunit [Enterococcus faecium TC 6]
gi|289566502|ref|ZP_06446926.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF]
gi|293379372|ref|ZP_06625516.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1]
gi|293553551|ref|ZP_06674178.1| DNA gyrase, B subunit [Enterococcus faecium E1039]
gi|293563255|ref|ZP_06677707.1| DNA gyrase, B subunit [Enterococcus faecium E1162]
gi|293569155|ref|ZP_06680461.1| DNA gyrase, B subunit [Enterococcus faecium E1071]
gi|293572722|ref|ZP_06683686.1| DNA gyrase, B subunit [Enterococcus faecium E980]
gi|294616655|ref|ZP_06696426.1| DNA gyrase, B subunit [Enterococcus faecium E1636]
gi|294619749|ref|ZP_06699154.1| DNA gyrase, B subunit [Enterococcus faecium E1679]
gi|294623763|ref|ZP_06702591.1| DNA gyrase, B subunit [Enterococcus faecium U0317]
gi|314940127|ref|ZP_07847307.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04]
gi|314943042|ref|ZP_07849846.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C]
gi|314948160|ref|ZP_07851556.1| DNA gyrase, B subunit [Enterococcus faecium TX0082]
gi|314953426|ref|ZP_07856344.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A]
gi|314993835|ref|ZP_07859171.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B]
gi|314998140|ref|ZP_07863022.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01]
gi|383327325|ref|YP_005353209.1| DNA gyrase subunit B, GyrB [Enterococcus faecium Aus0004]
gi|389867188|ref|YP_006374611.1| DNA topoisomerase subunit B [Enterococcus faecium DO]
gi|406580334|ref|ZP_11055544.1| DNA gyrase subunit B [Enterococcus sp. GMD4E]
gi|406589608|ref|ZP_11064039.1| DNA gyrase subunit B [Enterococcus sp. GMD1E]
gi|415892741|ref|ZP_11549986.1| DNA gyrase, B subunit [Enterococcus faecium E4453]
gi|416143534|ref|ZP_11599808.1| DNA gyrase, B subunit [Enterococcus faecium E4452]
gi|424764533|ref|ZP_18191957.1| DNA gyrase, B subunit [Enterococcus faecium TX1337RF]
gi|424793316|ref|ZP_18219441.1| DNA gyrase, B subunit [Enterococcus faecium V689]
gi|424806872|ref|ZP_18232295.1| DNA gyrase, B subunit [Enterococcus faecium S447]
gi|424819243|ref|ZP_18244369.1| DNA gyrase, B subunit [Enterococcus faecium R501]
gi|424857928|ref|ZP_18282007.1| DNA gyrase, B subunit [Enterococcus faecium R499]
gi|424907540|ref|ZP_18331019.1| DNA gyrase, B subunit [Enterococcus faecium R497]
gi|424951452|ref|ZP_18366546.1| DNA gyrase, B subunit [Enterococcus faecium R496]
gi|424953295|ref|ZP_18368268.1| DNA gyrase, B subunit [Enterococcus faecium R494]
gi|424957793|ref|ZP_18372500.1| DNA gyrase, B subunit [Enterococcus faecium R446]
gi|424962333|ref|ZP_18376695.1| DNA gyrase, B subunit [Enterococcus faecium P1986]
gi|424963547|ref|ZP_18377757.1| DNA gyrase, B subunit [Enterococcus faecium P1190]
gi|424967254|ref|ZP_18380961.1| DNA gyrase, B subunit [Enterococcus faecium P1140]
gi|424971814|ref|ZP_18385222.1| DNA gyrase, B subunit [Enterococcus faecium P1139]
gi|424975900|ref|ZP_18389027.1| DNA gyrase, B subunit [Enterococcus faecium P1137]
gi|424978603|ref|ZP_18391513.1| DNA gyrase, B subunit [Enterococcus faecium P1123]
gi|424981750|ref|ZP_18394460.1| DNA gyrase, B subunit [Enterococcus faecium ERV99]
gi|424984817|ref|ZP_18397334.1| DNA gyrase, B subunit [Enterococcus faecium ERV69]
gi|424988996|ref|ZP_18401285.1| DNA gyrase, B subunit [Enterococcus faecium ERV38]
gi|424990981|ref|ZP_18403164.1| DNA gyrase, B subunit [Enterococcus faecium ERV26]
gi|424996499|ref|ZP_18408302.1| DNA gyrase, B subunit [Enterococcus faecium ERV168]
gi|424999013|ref|ZP_18410666.1| DNA gyrase, B subunit [Enterococcus faecium ERV165]
gi|425002204|ref|ZP_18413652.1| DNA gyrase, B subunit [Enterococcus faecium ERV161]
gi|425005667|ref|ZP_18416888.1| DNA gyrase, B subunit [Enterococcus faecium ERV102]
gi|425008322|ref|ZP_18419408.1| DNA gyrase, B subunit [Enterococcus faecium ERV1]
gi|425012513|ref|ZP_18423323.1| DNA gyrase, B subunit [Enterococcus faecium E422]
gi|425013671|ref|ZP_18424390.1| DNA gyrase, B subunit [Enterococcus faecium E417]
gi|425016674|ref|ZP_18427223.1| DNA gyrase, B subunit [Enterococcus faecium C621]
gi|425020979|ref|ZP_18431264.1| DNA gyrase, B subunit [Enterococcus faecium C497]
gi|425024300|ref|ZP_18434373.1| DNA gyrase, B subunit [Enterococcus faecium C1904]
gi|425033613|ref|ZP_18438567.1| DNA gyrase, B subunit [Enterococcus faecium 515]
gi|425034562|ref|ZP_18439445.1| DNA gyrase, B subunit [Enterococcus faecium 514]
gi|425040395|ref|ZP_18444869.1| DNA gyrase, B subunit [Enterococcus faecium 513]
gi|425040652|ref|ZP_18445107.1| DNA gyrase, B subunit [Enterococcus faecium 511]
gi|425047072|ref|ZP_18451049.1| DNA gyrase, B subunit [Enterococcus faecium 510]
gi|425050522|ref|ZP_18454260.1| DNA gyrase, B subunit [Enterococcus faecium 509]
gi|425053384|ref|ZP_18456930.1| DNA gyrase, B subunit [Enterococcus faecium 506]
gi|425054280|ref|ZP_18457792.1| DNA gyrase, B subunit [Enterococcus faecium 505]
gi|425057355|ref|ZP_18460778.1| DNA gyrase, B subunit [Enterococcus faecium 504]
gi|425062497|ref|ZP_18465650.1| DNA gyrase, B subunit [Enterococcus faecium 503]
gi|427396885|ref|ZP_18889511.1| DNA gyrase subunit B [Enterococcus durans FB129-CNAB-4]
gi|430820786|ref|ZP_19439408.1| DNA gyrase subunit B [Enterococcus faecium E0045]
gi|430823214|ref|ZP_19441786.1| DNA gyrase subunit B [Enterococcus faecium E0120]
gi|430826501|ref|ZP_19444683.1| DNA gyrase subunit B [Enterococcus faecium E0164]
gi|430828712|ref|ZP_19446829.1| DNA gyrase subunit B [Enterococcus faecium E0269]
gi|430831766|ref|ZP_19449814.1| DNA gyrase subunit B [Enterococcus faecium E0333]
gi|430834919|ref|ZP_19452921.1| DNA gyrase subunit B [Enterococcus faecium E0679]
gi|430836323|ref|ZP_19454304.1| DNA gyrase subunit B [Enterococcus faecium E0680]
gi|430839252|ref|ZP_19457193.1| DNA gyrase subunit B [Enterococcus faecium E0688]
gi|430842549|ref|ZP_19460462.1| DNA gyrase subunit B [Enterococcus faecium E1007]
gi|430843001|ref|ZP_19460903.1| DNA gyrase subunit B [Enterococcus faecium E1050]
gi|430848164|ref|ZP_19465991.1| DNA gyrase subunit B [Enterococcus faecium E1133]
gi|430850647|ref|ZP_19468404.1| DNA gyrase subunit B [Enterococcus faecium E1185]
gi|430853333|ref|ZP_19471063.1| DNA gyrase subunit B [Enterococcus faecium E1258]
gi|430855826|ref|ZP_19473532.1| DNA gyrase subunit B [Enterococcus faecium E1392]
gi|430859054|ref|ZP_19476672.1| DNA gyrase subunit B [Enterococcus faecium E1552]
gi|430861179|ref|ZP_19478768.1| DNA gyrase subunit B [Enterococcus faecium E1573]
gi|430866247|ref|ZP_19481524.1| DNA gyrase subunit B [Enterococcus faecium E1574]
gi|430888509|ref|ZP_19484382.1| DNA gyrase subunit B [Enterococcus faecium E1575]
gi|430952221|ref|ZP_19486264.1| DNA gyrase subunit B [Enterococcus faecium E1576]
gi|430998689|ref|ZP_19488072.1| DNA gyrase subunit B [Enterococcus faecium E1578]
gi|431036317|ref|ZP_19492087.1| DNA gyrase subunit B [Enterococcus faecium E1590]
gi|431213196|ref|ZP_19501061.1| DNA gyrase subunit B [Enterococcus faecium E1620]
gi|431235057|ref|ZP_19503080.1| DNA gyrase subunit B [Enterococcus faecium E1622]
gi|431255558|ref|ZP_19504681.1| DNA gyrase subunit B [Enterococcus faecium E1623]
gi|431303596|ref|ZP_19508443.1| DNA gyrase subunit B [Enterococcus faecium E1626]
gi|431506942|ref|ZP_19515768.1| DNA gyrase subunit B [Enterococcus faecium E1634]
gi|431545128|ref|ZP_19518769.1| DNA gyrase subunit B [Enterococcus faecium E1731]
gi|431592395|ref|ZP_19521631.1| DNA gyrase subunit B [Enterococcus faecium E1861]
gi|431726687|ref|ZP_19525438.1| DNA gyrase subunit B [Enterococcus faecium E1904]
gi|431739124|ref|ZP_19528064.1| DNA gyrase subunit B [Enterococcus faecium E1972]
gi|431740593|ref|ZP_19529505.1| DNA gyrase subunit B [Enterococcus faecium E2039]
gi|431743908|ref|ZP_19532781.1| DNA gyrase subunit B [Enterococcus faecium E2071]
gi|431747293|ref|ZP_19536091.1| DNA gyrase subunit B [Enterococcus faecium E2134]
gi|431749480|ref|ZP_19538220.1| DNA gyrase subunit B [Enterococcus faecium E2297]
gi|431756019|ref|ZP_19544661.1| DNA gyrase subunit B [Enterococcus faecium E2883]
gi|431758014|ref|ZP_19546643.1| DNA gyrase subunit B [Enterococcus faecium E3083]
gi|431763280|ref|ZP_19551833.1| DNA gyrase subunit B [Enterococcus faecium E3548]
gi|431764847|ref|ZP_19553375.1| DNA gyrase subunit B [Enterococcus faecium E4215]
gi|431768128|ref|ZP_19556569.1| DNA gyrase subunit B [Enterococcus faecium E1321]
gi|431769369|ref|ZP_19557779.1| DNA gyrase subunit B [Enterococcus faecium E1644]
gi|431774627|ref|ZP_19562933.1| DNA gyrase subunit B [Enterococcus faecium E2369]
gi|431777539|ref|ZP_19565792.1| DNA gyrase subunit B [Enterococcus faecium E2560]
gi|431779780|ref|ZP_19567971.1| DNA gyrase subunit B [Enterococcus faecium E4389]
gi|431782442|ref|ZP_19570575.1| DNA gyrase subunit B [Enterococcus faecium E6012]
gi|431784263|ref|ZP_19572305.1| DNA gyrase subunit B [Enterococcus faecium E6045]
gi|447911526|ref|YP_007392938.1| DNA gyrase subunit B [Enterococcus faecium NRRL B-2354]
gi|68195124|gb|EAN09583.1| DNA gyrase, B subunit [Enterococcus faecium DO]
gi|227180223|gb|EEI61195.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330]
gi|257812878|gb|EEV41636.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933]
gi|257816974|gb|EEV44302.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502]
gi|257824145|gb|EEV51077.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733]
gi|257826893|gb|EEV53519.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410]
gi|257829487|gb|EEV56094.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408]
gi|257832856|gb|EEV59277.1| DNA gyrase B subunit [Enterococcus faecium Com12]
gi|257837187|gb|EEV62261.1| DNA gyrase B subunit [Enterococcus faecium Com15]
gi|260075405|gb|EEW63711.1| DNA gyrase B subunit [Enterococcus faecium C68]
gi|260078549|gb|EEW66251.1| DNA gyrase B subunit [Enterococcus faecium TC 6]
gi|289161711|gb|EFD09587.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF]
gi|291588124|gb|EFF19966.1| DNA gyrase, B subunit [Enterococcus faecium E1071]
gi|291590475|gb|EFF22213.1| DNA gyrase, B subunit [Enterococcus faecium E1636]
gi|291594019|gb|EFF25488.1| DNA gyrase, B subunit [Enterococcus faecium E1679]
gi|291596717|gb|EFF27940.1| DNA gyrase, B subunit [Enterococcus faecium U0317]
gi|291602306|gb|EFF32531.1| DNA gyrase, B subunit [Enterococcus faecium E1039]
gi|291604794|gb|EFF34276.1| DNA gyrase, B subunit [Enterococcus faecium E1162]
gi|291607214|gb|EFF36572.1| DNA gyrase, B subunit [Enterococcus faecium E980]
gi|292641895|gb|EFF60061.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1]
gi|313587852|gb|EFR66697.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01]
gi|313591726|gb|EFR70571.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B]
gi|313594529|gb|EFR73374.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A]
gi|313598242|gb|EFR77087.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C]
gi|313640632|gb|EFS05212.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04]
gi|313645414|gb|EFS09994.1| DNA gyrase, B subunit [Enterococcus faecium TX0082]
gi|364089253|gb|EHM31959.1| DNA gyrase, B subunit [Enterococcus faecium E4452]
gi|364093162|gb|EHM35462.1| DNA gyrase, B subunit [Enterococcus faecium E4453]
gi|378937019|gb|AFC62091.1| DNA gyrase subunit B, GyrB [Enterococcus faecium Aus0004]
gi|388532437|gb|AFK57629.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus faecium
DO]
gi|402419086|gb|EJV51368.1| DNA gyrase, B subunit [Enterococcus faecium TX1337RF]
gi|402916434|gb|EJX37312.1| DNA gyrase, B subunit [Enterococcus faecium V689]
gi|402918795|gb|EJX39457.1| DNA gyrase, B subunit [Enterococcus faecium S447]
gi|402926543|gb|EJX46578.1| DNA gyrase, B subunit [Enterococcus faecium R501]
gi|402927798|gb|EJX47727.1| DNA gyrase, B subunit [Enterococcus faecium R499]
gi|402930071|gb|EJX49768.1| DNA gyrase, B subunit [Enterococcus faecium R496]
gi|402930131|gb|EJX49822.1| DNA gyrase, B subunit [Enterococcus faecium R497]
gi|402939453|gb|EJX58361.1| DNA gyrase, B subunit [Enterococcus faecium R494]
gi|402940985|gb|EJX59747.1| DNA gyrase, B subunit [Enterococcus faecium P1986]
gi|402942732|gb|EJX61297.1| DNA gyrase, B subunit [Enterococcus faecium R446]
gi|402948841|gb|EJX66943.1| DNA gyrase, B subunit [Enterococcus faecium P1190]
gi|402952373|gb|EJX70195.1| DNA gyrase, B subunit [Enterococcus faecium P1137]
gi|402954780|gb|EJX72367.1| DNA gyrase, B subunit [Enterococcus faecium P1140]
gi|402957370|gb|EJX74762.1| DNA gyrase, B subunit [Enterococcus faecium P1139]
gi|402961186|gb|EJX78243.1| DNA gyrase, B subunit [Enterococcus faecium P1123]
gi|402962646|gb|EJX79566.1| DNA gyrase, B subunit [Enterococcus faecium ERV99]
gi|402967780|gb|EJX84306.1| DNA gyrase, B subunit [Enterococcus faecium ERV69]
gi|402970149|gb|EJX86510.1| DNA gyrase, B subunit [Enterococcus faecium ERV38]
gi|402973448|gb|EJX89575.1| DNA gyrase, B subunit [Enterococcus faecium ERV168]
gi|402978105|gb|EJX93869.1| DNA gyrase, B subunit [Enterococcus faecium ERV26]
gi|402981075|gb|EJX96629.1| DNA gyrase, B subunit [Enterococcus faecium ERV165]
gi|402983988|gb|EJX99326.1| DNA gyrase, B subunit [Enterococcus faecium ERV161]
gi|402985345|gb|EJY00562.1| DNA gyrase, B subunit [Enterococcus faecium ERV102]
gi|402992806|gb|EJY07473.1| DNA gyrase, B subunit [Enterococcus faecium ERV1]
gi|402992968|gb|EJY07621.1| DNA gyrase, B subunit [Enterococcus faecium E422]
gi|403000484|gb|EJY14601.1| DNA gyrase, B subunit [Enterococcus faecium E417]
gi|403006339|gb|EJY19990.1| DNA gyrase, B subunit [Enterococcus faecium C621]
gi|403007248|gb|EJY20838.1| DNA gyrase, B subunit [Enterococcus faecium C1904]
gi|403007980|gb|EJY21515.1| DNA gyrase, B subunit [Enterococcus faecium C497]
gi|403009200|gb|EJY22663.1| DNA gyrase, B subunit [Enterococcus faecium 515]
gi|403012980|gb|EJY26130.1| DNA gyrase, B subunit [Enterococcus faecium 513]
gi|403020060|gb|EJY32620.1| DNA gyrase, B subunit [Enterococcus faecium 514]
gi|403022573|gb|EJY34930.1| DNA gyrase, B subunit [Enterococcus faecium 510]
gi|403023309|gb|EJY35582.1| DNA gyrase, B subunit [Enterococcus faecium 509]
gi|403028096|gb|EJY39937.1| DNA gyrase, B subunit [Enterococcus faecium 511]
gi|403030615|gb|EJY42292.1| DNA gyrase, B subunit [Enterococcus faecium 506]
gi|403036327|gb|EJY47678.1| DNA gyrase, B subunit [Enterococcus faecium 505]
gi|403038090|gb|EJY49328.1| DNA gyrase, B subunit [Enterococcus faecium 503]
gi|403040679|gb|EJY51739.1| DNA gyrase, B subunit [Enterococcus faecium 504]
gi|404454195|gb|EKA01156.1| DNA gyrase subunit B [Enterococcus sp. GMD4E]
gi|404470572|gb|EKA15193.1| DNA gyrase subunit B [Enterococcus sp. GMD1E]
gi|425722632|gb|EKU85526.1| DNA gyrase subunit B [Enterococcus durans FB129-CNAB-4]
gi|430439172|gb|ELA49544.1| DNA gyrase subunit B [Enterococcus faecium E0045]
gi|430442312|gb|ELA52357.1| DNA gyrase subunit B [Enterococcus faecium E0120]
gi|430445014|gb|ELA54804.1| DNA gyrase subunit B [Enterococcus faecium E0164]
gi|430480407|gb|ELA57581.1| DNA gyrase subunit B [Enterococcus faecium E0333]
gi|430483252|gb|ELA60346.1| DNA gyrase subunit B [Enterococcus faecium E0269]
gi|430484988|gb|ELA61935.1| DNA gyrase subunit B [Enterococcus faecium E0679]
gi|430488450|gb|ELA65121.1| DNA gyrase subunit B [Enterococcus faecium E0680]
gi|430490710|gb|ELA67206.1| DNA gyrase subunit B [Enterococcus faecium E0688]
gi|430492970|gb|ELA69306.1| DNA gyrase subunit B [Enterococcus faecium E1007]
gi|430498055|gb|ELA74063.1| DNA gyrase subunit B [Enterococcus faecium E1050]
gi|430535006|gb|ELA75429.1| DNA gyrase subunit B [Enterococcus faecium E1185]
gi|430535830|gb|ELA76227.1| DNA gyrase subunit B [Enterococcus faecium E1133]
gi|430541155|gb|ELA81332.1| DNA gyrase subunit B [Enterococcus faecium E1258]
gi|430544573|gb|ELA84602.1| DNA gyrase subunit B [Enterococcus faecium E1552]
gi|430546368|gb|ELA86330.1| DNA gyrase subunit B [Enterococcus faecium E1392]
gi|430550212|gb|ELA90009.1| DNA gyrase subunit B [Enterococcus faecium E1573]
gi|430551475|gb|ELA91226.1| DNA gyrase subunit B [Enterococcus faecium E1574]
gi|430556025|gb|ELA95548.1| DNA gyrase subunit B [Enterococcus faecium E1575]
gi|430557356|gb|ELA96815.1| DNA gyrase subunit B [Enterococcus faecium E1576]
gi|430562857|gb|ELB02088.1| DNA gyrase subunit B [Enterococcus faecium E1590]
gi|430563350|gb|ELB02575.1| DNA gyrase subunit B [Enterococcus faecium E1578]
gi|430570449|gb|ELB09409.1| DNA gyrase subunit B [Enterococcus faecium E1620]
gi|430572917|gb|ELB11753.1| DNA gyrase subunit B [Enterococcus faecium E1622]
gi|430577756|gb|ELB16336.1| DNA gyrase subunit B [Enterococcus faecium E1623]
gi|430580237|gb|ELB18717.1| DNA gyrase subunit B [Enterococcus faecium E1626]
gi|430587329|gb|ELB25562.1| DNA gyrase subunit B [Enterococcus faecium E1634]
gi|430592020|gb|ELB30047.1| DNA gyrase subunit B [Enterococcus faecium E1861]
gi|430592176|gb|ELB30198.1| DNA gyrase subunit B [Enterococcus faecium E1731]
gi|430595710|gb|ELB33593.1| DNA gyrase subunit B [Enterococcus faecium E1904]
gi|430596667|gb|ELB34491.1| DNA gyrase subunit B [Enterococcus faecium E1972]
gi|430602963|gb|ELB40507.1| DNA gyrase subunit B [Enterococcus faecium E2039]
gi|430605971|gb|ELB43343.1| DNA gyrase subunit B [Enterococcus faecium E2071]
gi|430606661|gb|ELB44006.1| DNA gyrase subunit B [Enterococcus faecium E2134]
gi|430611477|gb|ELB48564.1| DNA gyrase subunit B [Enterococcus faecium E2297]
gi|430616134|gb|ELB53059.1| DNA gyrase subunit B [Enterococcus faecium E2883]
gi|430618519|gb|ELB55366.1| DNA gyrase subunit B [Enterococcus faecium E3083]
gi|430622974|gb|ELB59684.1| DNA gyrase subunit B [Enterococcus faecium E3548]
gi|430629857|gb|ELB66245.1| DNA gyrase subunit B [Enterococcus faecium E1321]
gi|430629935|gb|ELB66317.1| DNA gyrase subunit B [Enterococcus faecium E4215]
gi|430633837|gb|ELB69988.1| DNA gyrase subunit B [Enterococcus faecium E2369]
gi|430636944|gb|ELB72988.1| DNA gyrase subunit B [Enterococcus faecium E1644]
gi|430639153|gb|ELB75034.1| DNA gyrase subunit B [Enterococcus faecium E2560]
gi|430641348|gb|ELB77157.1| DNA gyrase subunit B [Enterococcus faecium E4389]
gi|430647079|gb|ELB82527.1| DNA gyrase subunit B [Enterococcus faecium E6012]
gi|430649837|gb|ELB85204.1| DNA gyrase subunit B [Enterococcus faecium E6045]
gi|445187235|gb|AGE28877.1| DNA gyrase subunit B [Enterococcus faecium NRRL B-2354]
Length = 648
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/533 (48%), Positives = 363/533 (68%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFT 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV
Sbjct: 179 PDPEIFTETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYDGGIKSYV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 237 EYLNANKTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPG
Sbjct: 356 RTVTDRLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 416 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 476 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QL
Sbjct: 535 YVYIAQPPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 595 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|365960414|ref|YP_004941981.1| DNA gyrase subunit B [Flavobacterium columnare ATCC 49512]
gi|365737095|gb|AEW86188.1| DNA gyrase subunit B [Flavobacterium columnare ATCC 49512]
Length = 646
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/558 (46%), Positives = 365/558 (65%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+R+G Y Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKATVYREGKIYEQEYERGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + D++GT + F PD +F +++ ++T+A R+RELAFLN +TI L
Sbjct: 155 ----QYPVKQIGTTDKRGTTVWFKPDGTIFQQTLEYSYDTLAARMRELAFLNKGITITLT 210
Query: 121 -KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
K D E E F + GL+E+V++L+ ++ P+ V+ D I +++AL + +
Sbjct: 211 DKRGQDKEGKYLGETFHSKEGLKEFVKFLDGNRVPIIGHVISMENDKGEIPVEVALIY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D+YS+ + Y N+I T +GGTH++G + LTRTL S + +SG+ REGL
Sbjct: 270 DSYSENIFSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGLLDKLKFEISGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ I+ K + A
Sbjct: 330 TAIISVKVAEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEENPNDAKIIVQKVILAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++V++K+V+ LPGKL+DCS P + EIF+VEGDSAGG+AKQGRDR
Sbjct: 390 QARHAAKKAREMVQRKTVMGGGGLPGKLSDCSEQDPTKCEIFLVEGDSAGGTAKQGRDRN 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ V D K E LRYHK++I
Sbjct: 450 FQAILPLRGKILNVEKAMHHKVFENEEIRNIFTALGVTVGTADDSKALNLEKLRYHKVVI 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DAD+DG+HI TL+LTFF+R+ K L +EG +Y+ PPLY V++G + +Y +D+ + +
Sbjct: 510 MCDADIDGSHISTLILTFFFRFMKELIEEGHVYIATPPLYLVKKGNKKEYAWDEKQRDAI 569
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
A +IQR+KGLGEM QLWETTLNP R L+Q+ I+ EA+ VFS LMG
Sbjct: 570 NEKMGGGA--NIQRYKGLGEMNAEQLWETTLNPGYRTLRQVTIDSLTEADRVFSMLMGDE 627
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 628 VPPRREFIEKNAIYANID 645
>gi|373110591|ref|ZP_09524857.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 10230]
gi|423130304|ref|ZP_17117979.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 12901]
gi|423133984|ref|ZP_17121631.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 101113]
gi|371642325|gb|EHO07893.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 10230]
gi|371645840|gb|EHO11361.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 12901]
gi|371647755|gb|EHO13251.1| DNA gyrase, B subunit [Myroides odoratimimus CIP 101113]
Length = 646
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/562 (45%), Positives = 372/562 (66%), Gaps = 24/562 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G Y Q+YSRGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLRATVYREGKIYEQEYSRGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D++GT + F PD +FT ++F ++T+AGR+REL+FLN L I L
Sbjct: 155 LFPVKV----IGETDKRGTSVTFKPDHTIFTQTLEFSYDTLAGRLRELSFLNKGLKITLT 210
Query: 121 -----KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLAL 173
+E+ +P+ +E FF+ GL+E++++L+ + P+ DV+ D I +++AL
Sbjct: 211 DKRVIEENGEPK----HEVFFSKEGLKEFIKFLDGSRVPIIEDVISMELDKGEIPVEVAL 266
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ +D Y++ + Y N+I T +GGTH++G + LTRTL S + ++G+
Sbjct: 267 VY-NDTYAENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGMLDKLKFEITGDDF 325
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+ I+ K
Sbjct: 326 REGLTAIVSVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEEHPNDAKIIVQKV 385
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A +A AAK+AR++V++K+V+ LPGKL+DCS + E+F+VEGDSAGG+AKQG
Sbjct: 386 ILAAQARHAAKKAREMVQRKTVMVGGGLPGKLSDCSEQDASKCEVFLVEGDSAGGTAKQG 445
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYH 409
RDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K E LRYH
Sbjct: 446 RDRNFQAILPLRGKILNVEKAMGHKVFENEEIKNIFTALGVTMGTEEDSKALNLEKLRYH 505
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
K++I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G++ +Y + D E
Sbjct: 506 KVVIMCDADVDGSHIATLILTFFFRYMRGLIENGYVYIATPPLYMVKKGQRKEYAWTDEE 565
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ S + S+QR+KGLGEM QLW+TT+NPE R+L+Q+ I+ EA+ VFS L
Sbjct: 566 RLELMEKMGSGS--SVQRYKGLGEMNAEQLWDTTMNPEHRILRQVTIDSLQEADRVFSML 623
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A +D
Sbjct: 624 MGDEVPPRRDFIEKNATYAKID 645
>gi|433426701|ref|ZP_20406924.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|448570957|ref|ZP_21639468.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|448595853|ref|ZP_21653300.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
gi|432196866|gb|ELK53287.1| DNA gyrase subunit B [Haloferax sp. BAB2207]
gi|445722875|gb|ELZ74526.1| DNA gyrase subunit B [Haloferax lucentense DSM 14919]
gi|445742307|gb|ELZ93802.1| DNA gyrase subunit B [Haloferax alexandrinus JCM 10717]
Length = 639
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/548 (49%), Positives = 368/548 (67%), Gaps = 11/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + ++ G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTHRFEVGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN + I+L
Sbjct: 152 QVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNSGVEISL- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
SD ++ + + F GG+ E+V++LN K LHD V+ + + +GI +++A+Q +D
Sbjct: 210 ---SDERTDESSTFLFEGGIREFVEYLNETKTALHDDVIYYDDESEGIEVEIAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSHDMLDDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+SK++ A +
Sbjct: 326 AVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAKQGRDR+F
Sbjct: 386 ARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSESELFIVEGDSAGGSAKQGRDRKF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++I++TDAD
Sbjct: 446 QAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRLILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEEC 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG V RK
Sbjct: 565 NGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMGDAVGPRK 624
Query: 539 ELIQNAAN 546
+ I++ AN
Sbjct: 625 QFIKDHAN 632
>gi|331703026|ref|YP_004399713.1| DNA Gyrase Subunit B [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328801581|emb|CBW53734.1| DNA Gyrase Subunit B [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 634
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/553 (45%), Positives = 366/553 (66%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+R+ + YHQ +S+G
Sbjct: 92 LVFTQLHAGGKF--DSESYKISGGLHGVGASVVNALSLYVEVEVYRNNIHYHQLFSKG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D +GT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESELQQLGHTDLRGTKVKFKPDPEIFKETVVFDYEIIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFLNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K +L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNNKTPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQKAREETRRKSALDSFSLPGKLADCETKDSSIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI+++I A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIITAVGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y D++L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDSQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKI 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|392396308|ref|YP_006432909.1| DNA gyrase subunit B [Flexibacter litoralis DSM 6794]
gi|390527386|gb|AFM03116.1| DNA gyrase subunit B [Flexibacter litoralis DSM 6794]
Length = 677
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/567 (46%), Positives = 376/567 (66%), Gaps = 25/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS+ L V V R+G + Q+YS G P
Sbjct: 119 VVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSDHLRVEVHRNGKIFEQEYSCGAP 176
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ V + + D GT++ F PD +FT ++ F + T+A R+REL++LN + I L
Sbjct: 177 KYS----VREIGTTDVSGTQVTFHPDATIFTHSV-FKYETVANRLRELSYLNAGVKITLS 231
Query: 120 --RKE--DSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLAL 173
RKE D D N E F + GGL E+V++L+ + + + + D + + + +A+
Sbjct: 232 DQRKEFGDKDENGNFVTETFLSEGGLREFVEFLDKSRTAIIPNAIYVEGDKNDVPVQVAI 291
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ + +YS+ + Y N+I TI+GGTHI G +LTR L S K+ + DK + LSG
Sbjct: 292 LYNT-SYSENVFSYVNNINTIEGGTHITGFYRALTRVLKSYADKN-GLTDKKVELSGGDF 349
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REG+T +ISV+V P+FEGQTKT+LGN EV V+ V + L YLE +P I+ K
Sbjct: 350 REGMTAVISVKVMEPQFEGQTKTKLGNSEVSGAVESCVADALYNYLEENPKEAKIIIQKV 409
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
A +A +AA++AR++V++K+ L + LPGKLADCS PE+ EI++VEGDSAGGSAKQG
Sbjct: 410 TLAAQARMAARKAREMVQRKTALSGTGLPGKLADCSEKDPEKCEIYLVEGDSAGGSAKQG 469
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL----GVKGEDF-KKEALRY 408
RDR+ QAILPLRGKILNVE+ E +Y NEEI+N+I ALG+ +GE + + LRY
Sbjct: 470 RDRQSQAILPLRGKILNVEKAQEHRIYDNEEIKNIITALGIRFGENEQGEKYLNLDKLRY 529
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
HKI+I+TDADVDG+HIRTL+LT F+RY K L ++G +Y+ PPLY +++GKQ YC+D+
Sbjct: 530 HKIVIMTDADVDGSHIRTLILTLFFRYMKDLVEKGYVYIAQPPLYLIKKGKQKIYCWDEP 589
Query: 469 E----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
+ ++++ S + +IQR+KGLGEM P QLWETT+NPE R +K++ +E AA A+
Sbjct: 590 QREQAMRELGGSNGNMNGVNIQRYKGLGEMNPEQLWETTMNPETRSMKRVDVESAAAADQ 649
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V R+E I+ A +D
Sbjct: 650 LFSMLMGDEVAPRREFIEKNARYARVD 676
>gi|259047900|ref|ZP_05738301.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175]
gi|259035577|gb|EEW36832.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175]
Length = 645
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/555 (47%), Positives = 361/555 (65%), Gaps = 11/555 (1%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFGG S LHGVG SVVNALS L V V++DG Y Q Y RG +
Sbjct: 101 VFTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSTDLTVQVFKDGNIYEQSYKRGAVL 158
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + + D+ GT + F PD ++F F+ + +A R+RELAFLN L + +
Sbjct: 159 EDLKI----IGTTDKHGTSVYFVPDPEIFQETTVFEFDKLANRVRELAFLNKGLKLTIT- 213
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAY 180
D PE+ + + GG++ YV+ LN K+ L + + + DGI +++A+Q+ S Y
Sbjct: 214 -DFRPEEPVRKSFCYEGGIKSYVEHLNKSKQVLFEEPIYVEGEQDGIQVEVAMQYTS-GY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+L + N+I T +GGTH G+K +LTR +N ++ K +K+ + LSGE VREGLT +
Sbjct: 272 HTNLLSFTNNIHTYEGGTHESGMKTALTRVINDYARRQKLMKENEEKLSGEDVREGLTAV 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN E R + D+ + ++L +P V I+ K + A KA
Sbjct: 332 VSIKHPDPQFEGQTKTKLGNSEARTITDRLFSTHFDKFLMENPQVARKIVEKGILASKAR 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
LAAKRAR++ R+KS L S+LPGKLADCSS P SE+FIVEGDSAGGSAKQGR R FQA
Sbjct: 392 LAAKRAREVTRKKSGLEISNLPGKLADCSSNDPTISELFIVEGDSAGGSAKQGRSRHFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++I+TDADVD
Sbjct: 452 ILPIRGKILNVEKATLDKILANEEIRSLFTAMGTGFGG-DFDLSKARYQKLVIMTDADVD 510
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLL+T FYRY + + G IY+ PPLYK+++GK Y +D EL+ P++
Sbjct: 511 GSHIRTLLITLFYRYMRPAVEAGYIYIAQPPLYKLKQGKNEYYIQNDKELEAKLKELPAH 570
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ R+KGLGEM QLWETT+NPE R + Q+ +EDAAEA+ + LMG RV+ R+E
Sbjct: 571 PKPQLSRYKGLGEMDAEQLWETTMNPENRSMLQVSVEDAAEADQILDILMGDRVEPRREF 630
Query: 541 IQNAANLVNLDHLDI 555
I++ A +N++ LDI
Sbjct: 631 IESNAKYINMEDLDI 645
>gi|321401256|gb|ADW83039.1| DNA gyrase subunit B [Leptospira borgpetersenii]
Length = 641
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIIE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ S+ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGSEGESLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNINKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|21904202|gb|AAM79083.1| putative DNA gyrase, subunit B [Streptococcus pyogenes MGAS315]
Length = 620
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/557 (46%), Positives = 377/557 (67%), Gaps = 17/557 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFGG S Y VSGGLHGVG SVVNALS L+V V+++G ++Q++ RG V
Sbjct: 73 VFTVLHAGGKFGGGS--YKVSGGLHGVGSSVVNALSTQLDVRVYKNGQIHYQEFKRGAVV 130
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L + + D GT + F PD ++FT QFD++ +A RI+ELAFLN L I++
Sbjct: 131 ADLEV----IGTTDVTGTTVHFTPDPEIFTETTQFDYSVLAKRIQELAFLNRGLKISITD 186
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAY 180
+ S E+ ++ + + GG+ YV++LN K + + + +++GI +++A+Q+ + +Y
Sbjct: 187 KRSGMEQEEH--FHYEGGIGSYVEFLNDKKDVIFETPIYTDGELEGIAVEVAMQYTT-SY 243
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+T++ +AN+I T +GGTH +G +A+LTR +N KK+K +K+ + +L+GE VREGLT +
Sbjct: 244 QETVMSFANNIHTHEGGTHEQGFRAALTRVINDYAKKNKILKENEDNLTGEDVREGLTAV 303
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ PNP+FEGQTKT+LGN EV K+ ++ E +L +P V I+ K + A KA
Sbjct: 304 ISVKHPNPQFEGQTKTKLGNSEVVKITNRLFSEAFQRFLLENPQVARKIVEKGILASKAR 363
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAKRAR++ R+KS L S+LPGKLADCSS ++E+FIVEGDSAGGSAK GR+R FQA
Sbjct: 364 IAAKRAREVTRKKSGLEISNLPGKLADCSSNDANQNELFIVEGDSAGGSAKSGRNREFQA 423
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G G DF RY K++I+TDADVD
Sbjct: 424 ILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGF-GADFDVSKARYQKLVIMTDADVD 482
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCY----DDAELKKVKS 475
GAHIRTLLLT YR+ + + + G +Y+ PP+Y V+ G ++ +Y + +LK
Sbjct: 483 GAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVGSEIKEYIQPGIDQEDQLKTALE 542
Query: 476 SFP-SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ + ++QR+KGLGEM QLWETT++PE R++ ++ ++DAAEA+ VF LMG RV
Sbjct: 543 KYSIGRSKPTVQRYKGLGEMDDHQLWETTMDPENRLMARVTVDDAAEADKVFDMLMGDRV 602
Query: 535 DTRKELIQNAANLVNLD 551
+ R++ I+ A LD
Sbjct: 603 EPRRDFIEENAVYSTLD 619
>gi|23097461|ref|NP_690927.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831]
gi|22775684|dbj|BAC11962.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831]
Length = 641
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/552 (48%), Positives = 370/552 (67%), Gaps = 12/552 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALS LEV V RDG + + +G P
Sbjct: 100 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSSELEVYVHRDGKVHFLSFKKGVP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + D GT F PD ++FT +++ +T+ R+RELAFLN L I++
Sbjct: 158 DGEIKV----IGDTDITGTVTHFRPDTEIFTETTEYNFDTLEQRLRELAFLNKGLKISIE 213
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
+ +D E+ Y+ + GG+ YV+++N +K+ LH+ + GI++++A+Q+ +D +
Sbjct: 214 DKRTDREQVTYH---YEGGISSYVEFINKNKEVLHEPFFAEGEDQGISVEVAIQY-NDGF 269
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
+ + +AN+I T +GG+H G ++ LTR +N KK+ +KD D +LSG+ VREG+T I
Sbjct: 270 ASNLYSFANNIHTYEGGSHEVGFRSGLTRIINDYAKKNGLIKDGDSNLSGDDVREGMTTI 329
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN EVR + D E +++L +P I+ K L A +A
Sbjct: 330 VSIKHPDPQFEGQTKTKLGNSEVRAITDGVFSEAFSKFLYENPSTAKIIVEKGLMASRAR 389
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
LAAK+AR+L R+KS L S+LPGKLADCSS SE++IVEGDSAGGSAK GRDR FQA
Sbjct: 390 LAAKKARELTRRKSNLEISNLPGKLADCSSRDAAISELYIVEGDSAGGSAKSGRDRHFQA 449
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + N E++ +I ALG GV GE+F RYHKI+I+TDADVD
Sbjct: 450 ILPLRGKILNVEKARLDRILSNNEVRAMITALGSGV-GEEFDISKARYHKIVIMTDADVD 508
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTFFYRY + L ++G IY+ PPLY+V++GK V Y Y+D EL ++ + P
Sbjct: 509 GAHIRTLLLTFFYRYMRPLIEQGYIYIAQPPLYQVKQGKTVNYAYNDKELDRILNEIPKA 568
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+IQR+KGLGEM QLW+TT++P+ R L Q+ + DA +A+ VF LMG +V+ R+
Sbjct: 569 PKPNIQRYKGLGEMNADQLWDTTMDPDTRTLLQVELSDAIDADQVFDMLMGDKVEPRRIF 628
Query: 541 I-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 IEENAQYVKNLD 640
>gi|456014414|gb|EMF48027.1| DNA gyrase subunit B [Planococcus halocryophilus Or1]
Length = 642
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/553 (48%), Positives = 365/553 (66%), Gaps = 12/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFGG S LHGVG SVVNALSE+ EV V RD ++ K+ RG
Sbjct: 99 VIMTVLHAGGKFGGGGYKVSGG--LHGVGASVVNALSETTEVYVNRDEKRHYIKFERG-- 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+T + + D GT IRF D ++F ++ + + R+RELA+LN L I ++
Sbjct: 155 --AVTEELKVIGDSDHTGTTIRFKADSEIFKETTVYEFDILDHRLRELAYLNRGLRIVVK 212
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
E EK + Y F GG++ YV+ LN K PLH+ F + DGIT+++++Q+ +
Sbjct: 213 DEREGEEKEKI--YHFVGGIKSYVEHLNKSKDPLHEEAIFVEAERDGITVEVSMQYNA-G 269
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y+ + +AN+I T +GGTH G K +LTR +N G+K +K++D++L+G+ VREGLT
Sbjct: 270 YAANIFSFANNINTHEGGTHESGFKTALTRVVNDYGRKKSMLKEQDLNLTGDDVREGLTA 329
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
IIS++ P+P+FEGQTKT+LGN EV +V+ +L +P V I+ K + A A
Sbjct: 330 IISIKHPDPQFEGQTKTKLGNTEVSTIVNNLFSNGFERFLLENPAVSKKIIEKGIMASHA 389
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AAK+AR+ R+KSVL SSLPGKLADCSS P+ SEI+IVEGDSAGGSAK GRDR FQ
Sbjct: 390 RMAAKKAREFTRRKSVLEVSSLPGKLADCSSRDPKISEIYIVEGDSAGGSAKSGRDRHFQ 449
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE+ + N+EI+N+I ALG G+ GE+F E RYHKI+I+TDADV
Sbjct: 450 AILPLRGKILNVEKARLDRILTNDEIRNIITALGTGI-GEEFNLEKARYHKIVIMTDADV 508
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTF +RY + L + G IY+ PPL+++++GK ++Y Y D +LK
Sbjct: 509 DGAHIRTLLLTFLFRYMRPLLEAGYIYIAQPPLFQIKQGKHIEYVYTDDQLKTALERLSP 568
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+IQR+KGLGEM QLW+TT++P+ R L Q+ + DA A+ F LMG V+ R+
Sbjct: 569 TPKPNIQRYKGLGEMNATQLWDTTMDPDVRTLLQVTLNDAMVADETFHILMGDDVEPRRN 628
Query: 540 LI-QNAANLVNLD 551
I +NA + NLD
Sbjct: 629 FIEENAKYVKNLD 641
>gi|323141431|ref|ZP_08076321.1| DNA gyrase, B subunit [Phascolarctobacterium succinatutens YIT
12067]
gi|322414087|gb|EFY04916.1| DNA gyrase, B subunit [Phascolarctobacterium succinatutens YIT
12067]
Length = 646
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 265/558 (47%), Positives = 380/558 (68%), Gaps = 23/558 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKFG GY VSGGLHGVG++ VNALSE +EV V R G Y ++++GK
Sbjct: 104 VIMTVLHAGGKFG--DGGYKVSGGLHGVGVTCVNALSEHMEVEVRRGGKCYGIEFAKGKT 161
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
L + GT + F PD +FT ++ ++T+ RIRELAFLN +TI+L
Sbjct: 162 SKKL----YEKGDCETTGTTVHFKPDATIFTET-EYSYDTLRLRIRELAFLNKGITISLT 216
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLALQW 175
E ++ + ++ FAGG+ EYV++++ DK KP++ + + + +++A+Q+
Sbjct: 217 DERAEDKSETFH---FAGGIIEYVEFMDKDKDKINPKPIY----LEGEKNAVIVEVAMQY 269
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
C D YS+ + Y N+I T +GGTH+ G + +LTRT+N+ +K+ +K+ + +LSG+ VRE
Sbjct: 270 C-DTYSENIFTYVNNINTEEGGTHLSGFRKALTRTINAYARKTNMLKENEDALSGDDVRE 328
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
GLT ++S++V NP+FE QTK +LGN EV +VD V + L E++E +P V ++ K++
Sbjct: 329 GLTAVLSLKVQNPQFESQTKIKLGNSEVMPIVDNLVGDTLAEFMEENPQVAKKLVEKAIV 388
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +A LAA++AR+L R+K+ + LPGKLADC S E++EI++VEGDSAGGSAKQGR+
Sbjct: 389 AARARLAARKARELTRRKNAMDLGGLPGKLADCKSRNVEDTEIYLVEGDSAGGSAKQGRN 448
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
FQAILPLRGKILNVE+ + +EEI+N+I A G G+ G+DF E RY KIII+T
Sbjct: 449 SDFQAILPLRGKILNVEKARLDKVLSSEEIRNMITAFGCGI-GDDFNLEKARYGKIIIMT 507
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVK 474
DADVDGAHIRTLLLTFFYRY + L EG +++ PPLY + + KQ Y Y D EL+++
Sbjct: 508 DADVDGAHIRTLLLTFFYRYMQPLIKEGHVFIAQPPLYLIRKNQKQHYYAYSDEELQEIL 567
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+A +QR+KGLGEM P QLWETT++P R + Q+ +EDAAEA+ +FS LMG +V
Sbjct: 568 DEVGRDANPYVQRYKGLGEMNPGQLWETTMDPAARTILQVHLEDAAEADRIFSILMGDKV 627
Query: 535 DTRKELIQ-NAANLVNLD 551
+ R++ I+ NA + NLD
Sbjct: 628 EPRRQFIEDNAKKVRNLD 645
>gi|301320449|gb|ADK69092.1| DNA gyrase, B subunit [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 634
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/553 (45%), Positives = 365/553 (66%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+R+ + YHQ +S G
Sbjct: 92 LVFTQLHAGGKF--DSESYKISGGLHGVGASVVNALSLYVEVEVYRNNIHYHQLFSEG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D +GT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESELQQLGHTDLRGTKVKFKPDPEIFKETVVFDYEVIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFLNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K +L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNNKTPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQKAREETRRKSALDSFSLPGKLADCETKDSSIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI+++I A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIITAIGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y D++L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDSQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKI 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|421526684|ref|ZP_15973291.1| DNA gyrase subunit B [Fusobacterium nucleatum ChDC F128]
gi|402257241|gb|EJU07716.1| DNA gyrase subunit B [Fusobacterium nucleatum ChDC F128]
Length = 635
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/558 (47%), Positives = 371/558 (66%), Gaps = 20/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G+ ++QKY RGKP
Sbjct: 90 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKTGVIHYQKYHRGKP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ +D GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 148 EEDV--KIIGSCGEDEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNKGLTITL- 203
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGITIDLALQW 175
D E+ + Y F GG+ +++ + D +KP + + D + +D+ +
Sbjct: 204 -SDLRKEEKKEEVYKFDGGILDFLNEIVKDDTTIIEKPFY----VSAEQDNVGVDVTFTY 258
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +RE
Sbjct: 259 TT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIRE 317
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
G+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L+
Sbjct: 318 GVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKIIIEKILN 377
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRD
Sbjct: 378 SKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRD 437
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++T
Sbjct: 438 RYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMT 496
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK V
Sbjct: 497 DADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKNVLG 556
Query: 476 SF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V
Sbjct: 557 QMNQENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKV 616
Query: 535 DTRKELIQNAANLV-NLD 551
+ R+E I+ A V N+D
Sbjct: 617 EPRREFIEEHAEYVKNID 634
>gi|363890517|ref|ZP_09317846.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
gi|361965108|gb|EHL18101.1| DNA gyrase, B subunit [Eubacteriaceae bacterium CM5]
Length = 641
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/556 (47%), Positives = 379/556 (68%), Gaps = 20/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V ++G Y Q++ G V
Sbjct: 99 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKEGKVYKQEFEYGNAV 156
Query: 62 TTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
T + TC + + GT I F PD+++F + + T+ R+RELAFLN ++I
Sbjct: 157 TDIKQIGTCPL------EETGTCISFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISI 209
Query: 118 ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWC 176
L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG I++A+Q+
Sbjct: 210 TL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY- 266
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD + +GE +REG
Sbjct: 267 TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENFTGEDIREG 326
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P I+ K + +
Sbjct: 327 LTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRS 386
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGGSAK+GR+
Sbjct: 387 QRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNS 446
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+ QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRYHKIII++D
Sbjct: 447 QNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSD 505
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y EL++ +
Sbjct: 506 ADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSSEELEQKLNE 565
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ FS LMG +V+
Sbjct: 566 IGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADETFSILMGDKVEP 624
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 625 RRDFIQQNARYVENLD 640
>gi|456861957|gb|EMF80543.1| DNA gyrase, B subunit [Leptospira weilii serovar Topaz str. LT2116]
Length = 641
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIVE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ S+ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGSEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P + IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPSITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|418721234|ref|ZP_13280418.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. UI 09149]
gi|418735595|ref|ZP_13292005.1| DNA gyrase, B subunit [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410742301|gb|EKQ91050.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. UI 09149]
gi|410748729|gb|EKR01623.1| DNA gyrase, B subunit [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 614
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 68 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 126 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIIE 180
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ ++ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 181 DRRRGAEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 239
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 240 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 299
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 300 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 359
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 360 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 419
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 420 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNINKIRYHKIMIMTDA 479
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 480 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 539
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 540 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 598
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 599 KQFIEINAAKVANLD 613
>gi|323343849|ref|ZP_08084076.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
gi|323095668|gb|EFZ38242.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis
ATCC 33269]
Length = 672
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/568 (46%), Positives = 379/568 (66%), Gaps = 26/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 113 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKP 170
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + + D++GTR +FWPDK +FTT I + + IA R+RELA+LN + I L
Sbjct: 171 LYPVKV----MGTTDKRGTRQQFWPDKTIFTT-IHYQWDIIARRMRELAYLNAGIKITLT 225
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
++ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 226 DLRANEEGKPRVEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAIMYNTD 285
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G + +LTR L + SK ++ I ++GE R
Sbjct: 286 -YSENIHSYVNNINTIEGGTHLSGFRTALTRVLKAYADNDPVISKQIEKAKIEIAGEDFR 344
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT YLE HP I K +
Sbjct: 345 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALTNYLEEHPAEAKKICEKVV 404
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 405 LAATARIAARKARESVQRKNFMSGGGLPGKLADCSNKDPKDCEIFLVEGDSAGGSAKQGR 464
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GED ++ + LRY
Sbjct: 465 DRYTQAILPLRGKILNVEKVQWHRVFEAESVMNIIQSIGVRFGVEGEDDREANIDKLRYD 524
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDA 468
KIII+TDADVDG+HI TL++T FYR+ + ++G +Y+ PPLYK + K +YCY +
Sbjct: 525 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIEDGHLYIANPPLYKCSYKNKVSEYCYTEQ 584
Query: 469 ELKKVKSSFP-----SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
+ + + + ++++ QR+KGLGEM P QLWETT++P+ R+LKQ+ IE+AAEA+
Sbjct: 585 QRQAFFDKYANGDEDAKSIHT-QRYKGLGEMNPDQLWETTMDPKSRLLKQVNIENAAEAD 643
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 644 EIFSMLMGDDVEPRREFIEQNATYANID 671
>gi|227500982|ref|ZP_03931031.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus tetradius ATCC
35098]
gi|227216755|gb|EEI82153.1| DNA topoisomerase (ATP-hydrolyzing) [Anaerococcus tetradius ATCC
35098]
Length = 641
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/553 (48%), Positives = 377/553 (68%), Gaps = 24/553 (4%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF S Y VSGGLHGVG+SVVNALSE L V RDG Y +++RG+
Sbjct: 102 VLTVLHAGGKF--DDSAYKVSGGLHGVGVSVVNALSEYLIAEVKRDGHIYKMEFARGE-- 157
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+T + + GT+I F D ++F T I +D + R RE+AFLN + I
Sbjct: 158 --VTKDIEVIGDTVETGTKITFKADGEIFDTTI-YDRTILENRFREMAFLNKGVEIQFED 214
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVV----GFRKDVDGITIDLALQWCS 177
E D + + + F GG+ E+V +LN +K P+ +++ GF++D + ++ A Q+ +
Sbjct: 215 EREDFKTS----FKFEGGISEFVAYLNRNKDPIMEMIPNFDGFQEDTE---VEFAFQY-T 266
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
DAYS+ +L YAN+I+T +GG+H+ G+++SLTRT+N +K +KD + +L GE +REG+
Sbjct: 267 DAYSENILSYANNIQTPEGGSHLAGLRSSLTRTVNDYARKYNFLKDNEDNLQGEDIREGI 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV++ +P+FEGQTK++LGN EVR VD + E+L +LE +P +I+ K+L++
Sbjct: 327 TAIISVKITDPQFEGQTKSKLGNSEVRGAVDTFISEHLANFLEENPKPAKAIIDKALASR 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++ARDL R++S+L S++LPGKLADC ST E+EIFIVEG+SAGGSAK GRD R
Sbjct: 387 RAREAARKARDLTRKRSILDSATLPGKLADCQSTDIGENEIFIVEGNSAGGSAKGGRDNR 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKI+NVE+ + +EEI+N+I A G G+ G++F E LRY KIII+TDA
Sbjct: 447 IQAILPLRGKIMNVEKAHLDRVLNSEEIKNMITAFGTGI-GKEFDLEKLRYGKIIIMTDA 505
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHIRTLLLTFFYRY K L D+G +YV +PPLY++ GK+ +Y Y D E KV
Sbjct: 506 DVDGAHIRTLLLTFFYRYMKDLIDKGHVYVALPPLYRISVGKKERYVYSDDERDKVIKEL 565
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED--AAEANVVFSSLMGARVD 535
+ Y I R+KGLGEM QLWETT++P++R+L + V+ED + + F+ LMG +V+
Sbjct: 566 GVDN-YKINRYKGLGEMNAEQLWETTMDPDRRVLLR-VVEDMESTTTDDTFALLMGEKVE 623
Query: 536 TRKELIQNAANLV 548
R+ IQ A V
Sbjct: 624 PRRNFIQENAKYV 636
>gi|301308180|ref|ZP_07214134.1| DNA gyrase, B subunit [Bacteroides sp. 20_3]
gi|423339843|ref|ZP_17317583.1| DNA gyrase, B subunit [Parabacteroides distasonis CL09T03C24]
gi|300833650|gb|EFK64266.1| DNA gyrase, B subunit [Bacteroides sp. 20_3]
gi|409228991|gb|EKN21873.1| DNA gyrase, B subunit [Parabacteroides distasonis CL09T03C24]
Length = 651
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 370/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q++S GKP
Sbjct: 99 VVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQEFSCGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN +T+ L
Sbjct: 157 LHDVQV----IDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNAGITLRLT 211
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + F GL+E+V++++ K+ L DV+ + GI +++AL + +
Sbjct: 212 DKRVLKEDGSFKSEIFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVEVALTYNT 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G+ REGL
Sbjct: 272 -SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+ K + A
Sbjct: 331 TAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIVDKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+AKQGRDR
Sbjct: 391 QARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTAKQGRDRN 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E LRYHK+II
Sbjct: 451 FQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKLRYHKVII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+ + + ++
Sbjct: 511 MTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWTEQQRQQF 570
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+ +F+ LMG
Sbjct: 571 ILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQIFAMLMG 630
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 631 EDVGPRREFIEENATYANID 650
>gi|414074131|ref|YP_006999348.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
gi|413974051|gb|AFW91515.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris UC509.9]
Length = 651
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/534 (46%), Positives = 364/534 (68%), Gaps = 14/534 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+VTV +DG +Y Q+Y RG L + D +GT + F
Sbjct: 124 LHGVGSSVVNALSTTLDVTVHKDGQKYFQEYHRGLVRDDLKI----IGETDLRGTTVHFV 179
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT ++FD + +A R+RELAFLN L I+L + EKN+ + + + GG++ YV
Sbjct: 180 PDPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVH-FHYEGGIQSYV 238
Query: 145 QWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + F + ++DGI +++A+Q+ +D Y ++ +AN+I T +GGTH +G
Sbjct: 239 EYLNENKTVIFEPAIFTEGEMDGIAVEVAMQY-TDTYHSVVMSFANNINTHEGGTHEQGF 297
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+ +LTR +N+ K++K +K+ +L+G+ VREGLT +ISV+ PNP+FEGQTKT+LGN EV
Sbjct: 298 RTALTRVINNYAKQNKILKENGDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEV 357
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
+V++ E LT ++ +P V I+ K + A KA +AAKRAR++ R+KS L S+LPG
Sbjct: 358 TGIVNKLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPG 417
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE++E+FIVEGDSAGGSAK GR+R FQAILP+RGKILNVE+ + NE
Sbjct: 418 KLADCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANE 477
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G D+ RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 478 EIRSLFTAMGTGFGG-DYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAG 536
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAE-----LKKVKSSFPSNALY-SIQRFKGLGEMMPV 497
+Y+ PP+Y ++ G + + E L++ + + ++QR+KGLGEM
Sbjct: 537 YVYIAQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDH 596
Query: 498 QLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
QLWETT++PE R++ ++ +EDAAEA+ +F LMG RV+ R+E I+N A +D
Sbjct: 597 QLWETTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTID 650
>gi|421099435|ref|ZP_15560087.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. 200901122]
gi|410797420|gb|EKR99527.1| DNA gyrase, B subunit [Leptospira borgpetersenii str. 200901122]
Length = 641
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGVP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVK---IKGDSSER-GTIVRFKPDAAIFTT-VDFQFDILSARFRELAFLNKGLVLIIE 207
Query: 121 --KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
+ S+ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DCRRGSEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+TDA
Sbjct: 447 IQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|153939432|ref|YP_001389375.1| DNA gyrase subunit B [Clostridium botulinum F str. Langeland]
gi|384460465|ref|YP_005673060.1| DNA gyrase subunit B [Clostridium botulinum F str. 230613]
gi|152935328|gb|ABS40826.1| DNA gyrase, B subunit [Clostridium botulinum F str. Langeland]
gi|295317482|gb|ADF97859.1| DNA gyrase, B subunit [Clostridium botulinum F str. 230613]
Length = 637
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/554 (50%), Positives = 385/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE EV V R+G + Q++ RG
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCEVEVRREGHIWKQRFERGIT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEDHGTKIYFKPDIEIFD-ELEFEYDTLAQRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + K+ DG +++A+Q+ +D
Sbjct: 209 DERYDKKEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDKNKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRAINDYARKFNYLKDTDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V E + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNSEVRGIVDTIVGESIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KSVL S+SLPGKLADCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSVLESTSLPGKLADCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F E +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFDIEKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL
Sbjct: 503 DGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIFKAKKEIYVYSDPELDAALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLW+TT++PE R L Q+ IEDA A+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMNPEQLWDTTMDPEHRTLLQVTIEDAMVADEIFTILMGTKVEPRR 622
Query: 539 ELIQNAAN-LVNLD 551
E I+N A+ +VNLD
Sbjct: 623 EFIENNADKVVNLD 636
>gi|340753204|ref|ZP_08689995.1| DNA gyrase, B subunit [Fusobacterium sp. 2_1_31]
gi|422315493|ref|ZP_16396925.1| DNA gyrase, B subunit [Fusobacterium periodonticum D10]
gi|340567084|gb|EEO39091.2| DNA gyrase, B subunit [Fusobacterium sp. 2_1_31]
gi|404592370|gb|EKA94208.1| DNA gyrase, B subunit [Fusobacterium periodonticum D10]
Length = 635
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/554 (46%), Positives = 368/554 (66%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G Y+QKY RGKP
Sbjct: 90 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKEGNVYYQKYHRGKP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ GT +RF D +F T + +++ T++ R++ELA+LN LTI L
Sbjct: 148 EEDV--KIIGSCEASEHGTTVRFKADGDIFETLV-YNYFTLSNRLKELAYLNRGLTITLS 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
D +K + Y F GG+ +++ + ++ + D + + D + +D+ + + +
Sbjct: 205 DLRKDEKKEE--TYKFDGGILDFLNEIVKEETTIIDKPFYVSAEQDNVGVDVTFTYTT-S 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +REG+
Sbjct: 262 QNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVA 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P + ++ K L++ KA
Sbjct: 322 IVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPAITKIVVEKILNSKKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRDR Q
Sbjct: 382 REAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++TDADV
Sbjct: 442 AILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-P 478
DGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK + +
Sbjct: 501 DGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVASGKQIIYAYNDLELKNILAQMNQ 560
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 561 ENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRR 620
Query: 539 ELIQNAANLV-NLD 551
E I+ A V N+D
Sbjct: 621 EFIEEHAEYVKNID 634
>gi|373494049|ref|ZP_09584655.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
gi|371969183|gb|EHO86634.1| DNA gyrase subunit B [Eubacterium infirmum F0142]
Length = 641
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/530 (48%), Positives = 360/530 (67%), Gaps = 12/530 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS + V + R+G Y Q+Y RGK VT L + G++ FW
Sbjct: 120 LHGVGASVVNALSTDMVVEIKRNGKIYRQEYKRGKTVTPLEV----IGESKSTGSKTTFW 175
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F T I+FD++T+ R RE+AFLN + I++ E P+K + + + GGL+EYV
Sbjct: 176 PDAEIFET-IEFDYDTLQHRFREMAFLNKGIKISITDERDTPKKKEV--FHYEGGLKEYV 232
Query: 145 QWLNTDKKPLH-DVVGFR-KDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEG 202
++N +K+ LH +V+ F ++ + + +++ALQ+ +D Y++ +L YAN+I T DGGTH+ G
Sbjct: 233 HYINQNKEVLHKEVIYFEVENKNSMEVEVALQY-TDRYNEFILSYANNINTTDGGTHMAG 291
Query: 203 VKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPE 262
+K++LTR +N KKSK +KD D +LSGE +REG+T I+SV++ P+FEGQTK +LGN E
Sbjct: 292 LKSALTRAINDYAKKSKILKDSDPALSGEDIREGITAIVSVKLAQPQFEGQTKAKLGNSE 351
Query: 263 VRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLP 322
VR V+ + + LT YLE HP I+ K + A +A AA++ARD+ R+K+ L S+SLP
Sbjct: 352 VRGFVETATNDNLTAYLEEHPQEAKIIIEKCIRASRAREAARKARDITRRKNALDSTSLP 411
Query: 323 GKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKN 382
GKLADCS P SEIF+VEGDSAGGSAKQGRDR QA+LPLRGKILNVE+ + +
Sbjct: 412 GKLADCSEKDPALSEIFLVEGDSAGGSAKQGRDRSRQAVLPLRGKILNVEKARLDKILNS 471
Query: 383 EEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDE 442
EEI+N+I A G GV G DF LRYHKIII+TDADVDGAHIRTLLLTFF+R+ L +
Sbjct: 472 EEIKNMITAFGCGV-GNDFDASKLRYHKIIIMTDADVDGAHIRTLLLTFFFRHMTPLIEG 530
Query: 443 GCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNAL-YSIQRFKGLGEMMPVQLWE 501
G +Y PPL+ ++GK V Y Y + E K+ + IQR+KGLGEM QLWE
Sbjct: 531 GYVYAAKPPLFMTKQGKDVYYTYSEPEQDKLLAELSGKKTKIDIQRYKGLGEMDFHQLWE 590
Query: 502 TTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLD 551
TT++ R L Q+ ++DA++A+ +F+ LMG +V RK+ I++ A +D
Sbjct: 591 TTMDFNNRTLVQITMDDASQADEIFTILMGDKVPPRKKFIEDNAKYAEID 640
>gi|292655722|ref|YP_003535619.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|448289708|ref|ZP_21480871.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|302425107|sp|D4GZ01.1|GYRB_HALVD RecName: Full=DNA gyrase subunit B
gi|291372625|gb|ADE04852.1| DNA gyrase subunit B [Haloferax volcanii DS2]
gi|445581225|gb|ELY35586.1| DNA gyrase subunit B [Haloferax volcanii DS2]
Length = 639
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/548 (48%), Positives = 368/548 (67%), Gaps = 11/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + ++ G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTHRFEVGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN + I+L
Sbjct: 152 QVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNSGVEISL- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
SD ++ + + F GG+ E+V++LN K LHD V+ + + +GI +++A+Q +D
Sbjct: 210 ---SDERTDESSTFLFEGGIREFVEYLNETKTALHDDVIYYDDESEGIEVEIAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+IS++ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+SK++ A +
Sbjct: 326 AVISIKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAKQGRDR+F
Sbjct: 386 ARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPAESELFIVEGDSAGGSAKQGRDRKF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++I++TDAD
Sbjct: 446 QAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRLILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEEC 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG V RK
Sbjct: 565 NGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMGDAVGPRK 624
Query: 539 ELIQNAAN 546
+ I++ AN
Sbjct: 625 QFIKDHAN 632
>gi|372324358|ref|ZP_09518947.1| DNA gyrase subunit B [Oenococcus kitaharae DSM 17330]
gi|366983166|gb|EHN58565.1| DNA gyrase subunit B [Oenococcus kitaharae DSM 17330]
Length = 652
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/550 (46%), Positives = 361/550 (65%), Gaps = 11/550 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ T+LHAGGKF S Y VSGGLHGVG SVVNALS+ ++V V+RDG Y+ + RG
Sbjct: 106 VFTILHAGGKF--DSKNYKVSGGLHGVGASVVNALSKEMDVRVYRDGKIYYMDFQRGHIQ 163
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T + P+ + +GT + F PD +F FD+NT+A RIRELAFLN L +++
Sbjct: 164 TEMKLLDEPM--RLERGTIVHFAPDPDIFRETTTFDYNTLASRIRELAFLNKGLRLSITD 221
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
+PEK + + + GG+ EYV++LN +K+PL + V + +GI +++ALQ+ +DA
Sbjct: 222 RRVEPEKKE--SFMYEGGIAEYVKFLNKNKQPLFPEPVYVEGEENGIQVEVALQY-TDAV 278
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++T++ + N+I T +GGTH G K +LTR +N KK +KD D L+GE VREG+T I
Sbjct: 279 AETLMSFTNNIHTHEGGTHETGFKMALTRIINDYAKKKGILKDSDDPLTGEDVREGITAI 338
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+S++ P+P+FEGQTKT+LGN + ++ V+ ++ +P+ +I +K + A KA
Sbjct: 339 VSIKHPDPQFEGQTKTKLGNTDAQQAVNHQFSTIFNRFMMENPETARAIANKGIIASKAR 398
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AAK+ARDL R+KS L S+L GKLAD +S P+ SE+FIVEGDSAGGSAKQGR R QA
Sbjct: 399 VAAKKARDLTRRKSGLEISALAGKLADNTSKDPDISELFIVEGDSAGGSAKQGRSRLTQA 458
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI++L A+G G G++F YHK+II+TDADVD
Sbjct: 459 ILPIRGKILNVEKATLDKVLANEEIRSLFTAMGTGF-GDEFDISKAHYHKVIIMTDADVD 517
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY--DDAELKKVKSSFP 478
GAHIRTLLLT F+R+ + L D G IY+ PPLY V G Q Y D EL + ++ P
Sbjct: 518 GAHIRTLLLTLFFRHMRPLIDAGYIYIAQPPLYGVAIGNSDQRVYLDSDEELDRYIATLP 577
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
++ IQR+KGLGEM QLW+TT++P+ R L ++ + E + F LMG RV+ R+
Sbjct: 578 ASPKPRIQRYKGLGEMDAEQLWDTTMDPKHRRLLRVSPDYQPEVDTTFDMLMGDRVEPRR 637
Query: 539 ELIQNAANLV 548
E I++ A V
Sbjct: 638 EFIEDNAQFV 647
>gi|313664969|ref|YP_004046840.1| DNA gyrase subunit B [Mycoplasma leachii PG50]
gi|392388565|ref|YP_005906974.1| DNA gyrase subunit B [Mycoplasma leachii 99/014/6]
gi|312949334|gb|ADR23930.1| DNA gyrase, B subunit [Mycoplasma leachii PG50]
gi|339276210|emb|CBV66789.1| DNA gyrase subunit B [Mycoplasma leachii 99/014/6]
Length = 634
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/553 (45%), Positives = 364/553 (65%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+R+ + YHQ +S G
Sbjct: 92 LVFTQLHAGGKF--DSETYKISGGLHGVGASVVNALSLYVEVEVYRNNIHYHQLFSEG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D +GT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESELQQLGQTDLRGTKVKFKPDPEIFKETVVFDYEVIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFLNGILDYIKEKNETKNKINPNIFYVDSKYENIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K +L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNNKTPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA+RAR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQRAREETRRKSALDSFSLPGKLADCETKDSNIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI++++ A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIVTAVGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y D +L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDNQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKI 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|423326757|ref|ZP_17304565.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 3837]
gi|404608114|gb|EKB07597.1| DNA gyrase, B subunit [Myroides odoratimimus CCUG 3837]
Length = 646
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/562 (45%), Positives = 372/562 (66%), Gaps = 24/562 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L TV+R+G Y Q+YSRGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDLLRATVYREGKIYEQEYSRGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + + D++GT + F PD +FT ++F ++T+AGR+REL+FLN L I L
Sbjct: 155 LFPVKV----IGETDKRGTSVTFKPDHTIFTQTLEFSYDTLAGRLRELSFLNKGLKITLT 210
Query: 121 -----KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLAL 173
+E+ +P+ +E FF+ GL+E++++L+ + P+ DV+ D I +++AL
Sbjct: 211 DKRVIEENGEPK----HEVFFSKEGLKEFIKFLDGSRVPIIEDVISMELDKGEIPVEVAL 266
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
+ +D Y++ + Y N+I T +GGTH++G + LTRTL S + ++G+
Sbjct: 267 VY-NDTYAENIYSYVNNINTHEGGTHLQGFRMGLTRTLKKYADASGMLDKLKFEITGDDF 325
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE HP+ I+ K
Sbjct: 326 REGLTAIVSVKVMEPQFEGQTKTKLGNREVVSPVSQAVAEMLENYLEEHPNDAKIIVQKV 385
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A +A AAK+AR++V++K+V+ LPGKL+DCS + E+F+VEGDSAGG+AKQG
Sbjct: 386 ILAAQARHAAKKAREMVQRKTVMVGGGLPGKLSDCSEQDASKCEVFLVEGDSAGGTAKQG 445
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYH 409
RDR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K E LRYH
Sbjct: 446 RDRNFQAILPLRGKILNVEKAMGHKVFENEEIKNIFTALGVTMGTEEDSKALNLEKLRYH 505
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
K++I+ DADVDG+HI TL+LTFF+RY + L + G +Y+ PPLY V++G++ +Y + D E
Sbjct: 506 KVVIMCDADVDGSHIATLILTFFFRYMRGLIENGYVYIATPPLYMVKKGQRKEYAWTDEE 565
Query: 470 LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSL 529
++ S + S+QR+KGLGEM QLW+TT+NPE R+L+Q+ I+ EA+ VFS L
Sbjct: 566 RLELVEKMGSGS--SVQRYKGLGEMNAEQLWDTTMNPEHRILRQVTIDSLQEADRVFSML 623
Query: 530 MGARVDTRKELIQNAANLVNLD 551
MG V R++ I+ A +D
Sbjct: 624 MGDEVPPRRDFIEKNATYAKID 645
>gi|150010130|ref|YP_001304873.1| DNA gyrase subunit B [Parabacteroides distasonis ATCC 8503]
gi|149938554|gb|ABR45251.1| DNA gyrase, B subunit [Parabacteroides distasonis ATCC 8503]
Length = 651
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 370/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q++S GKP
Sbjct: 99 VVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQEFSCGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN +T+ L
Sbjct: 157 LHDVQV----IDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNAGITLRLT 211
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + F GL+E+V++++ K+ L DV+ + GI +++AL + +
Sbjct: 212 DKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVEVALTYNT 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G+ REGL
Sbjct: 272 -SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+ K + A
Sbjct: 331 TAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIVDKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+AKQGRDR
Sbjct: 391 QARHAARKARELVQRKSPLTGGGLPGKLADCSSKDASICELFLVEGDSAGGTAKQGRDRN 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E LRYHK+II
Sbjct: 451 FQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKLRYHKVII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+ + + ++
Sbjct: 511 MTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWTEQQRQQF 570
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+ +F+ LMG
Sbjct: 571 ILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQIFAMLMG 630
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 631 EDVGPRREFIEENATYANID 650
>gi|255012609|ref|ZP_05284735.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_7]
Length = 620
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/560 (46%), Positives = 370/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q++S GKP
Sbjct: 68 VVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQEFSCGKP 125
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN +T+ L
Sbjct: 126 LHD----VQVIDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNAGITLRLT 180
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + F GL+E+V++++ K+ L DV+ + GI +++AL + +
Sbjct: 181 DKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVEVALTYNT 240
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G+ REGL
Sbjct: 241 -SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQGDDFREGL 299
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+ K + A
Sbjct: 300 TAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIVDKVILAA 359
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+AKQGRDR
Sbjct: 360 QARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTAKQGRDRN 419
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E LRYHK+II
Sbjct: 420 FQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKLRYHKVII 479
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+ + + ++
Sbjct: 480 MTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWTEQQRQQF 539
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+ +F+ LMG
Sbjct: 540 ILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQIFAMLMG 599
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 600 EDVGPRREFIEENATYANID 619
>gi|321401254|gb|ADW83038.1| DNA gyrase subunit B [Leptospira borgpetersenii]
Length = 641
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIIE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ ++ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGAEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNINKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|150014898|ref|YP_001307152.1| DNA gyrase subunit B [Clostridium beijerinckii NCIMB 8052]
gi|149901363|gb|ABR32196.1| DNA gyrase, B subunit [Clostridium beijerinckii NCIMB 8052]
Length = 635
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 281/554 (50%), Positives = 383/554 (69%), Gaps = 17/554 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE VTV RDG + QKYS+GK
Sbjct: 95 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEECTVTVNRDGHIWQQKYSKGKV 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ LT V D+ GT+ F PD ++F I FD ++ R+RELAFLN + I L
Sbjct: 153 LNELT----KVGDSDQTGTQTYFKPDAEIFD-EIVFDFEILSQRLRELAFLNKGIYIRLV 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDV-DGITIDLALQWCSDA 179
D EK + + + GG++ +V +LN +K PLH+ + + V D I++++ALQ+ +D
Sbjct: 208 --DKRDEKEEV--FHYEGGIKSFVSYLNRNKVPLHEEPIYIEGVKDNISVEVALQY-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I T++GGTH+ G K +LTR N KK +K+ D + +G+ +REGLT
Sbjct: 263 YTENIFSFANNIDTVEGGTHLVGFKTALTRVFNDYAKKFGHIKENDKNFTGDDIREGLTG 322
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++ P+FEGQTKT+LGN EVR +VD V E + +LE +P++ I+ K+L A +A
Sbjct: 323 VISIKIEEPQFEGQTKTKLGNSEVRGIVDSIVGENIGIFLEENPNIGKMIVDKALMAARA 382
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R KSVL S+LPGKLADCSS P E EI+IVEGDSAGGSAKQGR+R+FQ
Sbjct: 383 RDAARKARELTR-KSVLERSTLPGKLADCSSKDPRECEIYIVEGDSAGGSAKQGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKILNVE++ + + I+++I A G G+ G DF E +RY++III+TDADV
Sbjct: 442 AILPLRGKILNVEKQRLDRILNADTIRSMITAFGAGI-GNDFDVEKIRYNRIIIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L D+G +Y+ PPLYKV + K+ Y Y D EL+ V S
Sbjct: 501 DGAHIRTLLLTFFYRYMRNLIDDGHVYIAQPPLYKVSKSKKEYYAYSDPELESVLSELGG 560
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ IQR+KGLGEM QLW+TT++PE+R+L ++ IEDA A+ +F+ LMG +V+ RK
Sbjct: 561 KDNSTDIQRYKGLGEMNASQLWDTTMDPEKRILLKVNIEDAMAADEIFTILMGEKVEPRK 620
Query: 539 ELI-QNAANLVNLD 551
E I QNA N+VNLD
Sbjct: 621 EFIQQNARNVVNLD 634
>gi|359406618|ref|ZP_09199293.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
gi|357555419|gb|EHJ37072.1| DNA gyrase, B subunit [Prevotella stercorea DSM 18206]
Length = 657
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/567 (47%), Positives = 372/567 (65%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTRMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D++GTR +FWPD VFTT + + IA R+RELAFLN + I LR
Sbjct: 156 LYPVKV----VGETDKRGTRQQFWPDPTVFTTT-HYQWDIIARRMRELAFLNAGIRITLR 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
+ E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DMRPNEEGKTREEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAVMYNTD 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G +A+LTRTL + SK ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRAALTRTLKTYADNDPAISKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E LT YLE +P I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALTNYLEENPKEAKMICDKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+ + LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNPMTGGGLPGKLADCSNRDPKKCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPLRGKILNVE+ ++++E + N+I+++G+ GV+GED K+ + LRY
Sbjct: 450 DRYTQAILPLRGKILNVEKVMWHKVFESESVMNIIQSIGVRFGVEGEDDKEANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDD- 467
KIII+TDADVDG+HI TL++T FYR+ + EG +Y+ PPLY +V +YCY D
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPKVIQEGHLYIANPPLYLCTYKNKVKEYCYTDQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K QR+KGLGEM QLWETT++P+ R+L+Q+ IE+AAEA+
Sbjct: 570 QRQAFLDKYAGGVDDGKSIHTQRYKGLGEMNAEQLWETTMDPKTRLLRQVTIENAAEADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R++ I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRRKFIEEHATYANID 656
>gi|300726297|ref|ZP_07059750.1| DNA gyrase, B subunit [Prevotella bryantii B14]
gi|299776494|gb|EFI73051.1| DNA gyrase, B subunit [Prevotella bryantii B14]
Length = 658
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/568 (46%), Positives = 372/568 (65%), Gaps = 25/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS ++ V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMKSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D++GT +FWPD +FTT F + IA R+RELA+LN + I L
Sbjct: 156 LYPVKI----VGETDKRGTCQQFWPDPTIFTTTT-FQWDIIARRMRELAYLNAGIRITLT 210
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
+ E + + F GL+E+V++++ + L D V+ + + G+ I++A+ + +
Sbjct: 211 DLRPNAETGKTRQEVFHAVEGLKEFVRYVDRHRTHLFDDVIYLKTEKQGVPIEVAVMYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHV 233
D YS+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I ++GE
Sbjct: 271 D-YSENIHSYVNNINTIEGGTHLTGFRTALTRTLKAYADNDSAISKQIEKAKIEIAGEDF 329
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L++YLE HP +I K
Sbjct: 330 REGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSDYLEEHPSEAKAICEKV 389
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQG
Sbjct: 390 ILAATARIAARKARESVQRKNVMTGGGLPGKLADCSNKDPKQCEIFLVEGDSAGGSAKQG 449
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRY 408
RDR QAILPLRGKILNVE+ +++ E + N+I+++G+ GV+GE ++ + LRY
Sbjct: 450 RDRYTQAILPLRGKILNVEKVPWHRVFEAESVMNIIQSIGVRFGVEGEADREANIDKLRY 509
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDD 467
KIII+TDADVDG+HI TL++T F+R+ + +EG +Y+ PPLYK + K +YCY D
Sbjct: 510 DKIIIMTDADVDGSHIDTLIMTLFFRFMPKVIEEGHLYIATPPLYKCTFKNKVSEYCYTD 569
Query: 468 ----AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
A + K + QR+KGLGEM P QLWETT++P R+LKQ+ IEDAAEA+
Sbjct: 570 QQRQAFIDKYGNGIDDGKSIHTQRYKGLGEMNPEQLWETTMDPTSRLLKQVTIEDAAEAD 629
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V+ R+E I+ A N+D
Sbjct: 630 ETFSMLMGDDVEPRREFIEQNATYANID 657
>gi|256838953|ref|ZP_05544463.1| DNA gyrase, B subunit [Parabacteroides sp. D13]
gi|262382583|ref|ZP_06075720.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B]
gi|410104251|ref|ZP_11299165.1| DNA gyrase, B subunit [Parabacteroides sp. D25]
gi|423333431|ref|ZP_17311212.1| DNA gyrase, B subunit [Parabacteroides distasonis CL03T12C09]
gi|256739872|gb|EEU53196.1| DNA gyrase, B subunit [Parabacteroides sp. D13]
gi|262295461|gb|EEY83392.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B]
gi|409228311|gb|EKN21203.1| DNA gyrase, B subunit [Parabacteroides distasonis CL03T12C09]
gi|409234652|gb|EKN27479.1| DNA gyrase, B subunit [Parabacteroides sp. D25]
Length = 651
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 370/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q++S GKP
Sbjct: 99 VVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQEFSCGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + +D+ D+ GT I F PD +FT ++ ++ +A R+RELAFLN +T+ L
Sbjct: 157 LHDVQV----IDNTDKTGTTISFKPDGSIFTVT-EYKYDILATRLRELAFLNAGITLRLT 211
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + F GL+E+V++++ K+ L DV+ + GI +++AL + +
Sbjct: 212 DKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVEVALTYNT 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G+ REGL
Sbjct: 272 -SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+ K + A
Sbjct: 331 TAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIVDKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+AKQGRDR
Sbjct: 391 QARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTAKQGRDRN 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E LRYHK+II
Sbjct: 451 FQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKLRYHKVII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+ + + ++
Sbjct: 511 MTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWTEQQRQQF 570
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+ +F+ LMG
Sbjct: 571 ILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQIFAMLMG 630
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 631 EDVGPRREFIEENATYANID 650
>gi|321401252|gb|ADW83037.1| DNA gyrase subunit B [Leptospira borgpetersenii]
Length = 641
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIIE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ ++ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGAEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNINKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|340621962|ref|YP_004740414.1| DNA gyrase subunit B [Capnocytophaga canimorsus Cc5]
gi|339902228|gb|AEK23307.1| DNA gyrase subunit B [Capnocytophaga canimorsus Cc5]
Length = 652
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/564 (45%), Positives = 373/564 (66%), Gaps = 22/564 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS L V+RDG + Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHLTAVVYRDGKIWQQEYERGK- 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V ++GT + F PD +F +++ ++T+A R+RELAFLN +TI L
Sbjct: 154 ---VLYPVKQVGDTQKRGTTVTFQPDDLIFQQTLEYKYDTLATRMRELAFLNRGITITLT 210
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E ++ +E F++ GL+E++++L+ ++ + +V+ + + I +++A+ + +
Sbjct: 211 DKREREENGEFKSETFYSENGLKEFIRYLDGNRPAIISNVIAMEGEKNEIPVEVAMVY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL----NSLGKKSKTVKDKD--ISLSGE 231
D+YS+ + Y N+I T +GGTH+EG + LTRTL +S G K KDK + +SGE
Sbjct: 270 DSYSENLHSYVNNINTHEGGTHLEGFRRGLTRTLKKYADSSGLLEKMSKDKKNPVQISGE 329
Query: 232 HVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILS 291
REGLT I+SV+V P+FEGQTKT+LGN EV VV Q+V E L YLE HP+ I+
Sbjct: 330 DFREGLTAIVSVKVAEPQFEGQTKTKLGNSEVLAVVSQAVSEMLEAYLEEHPNDAKVIVE 389
Query: 292 KSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAK 351
K + A +A AA++AR+LV++K+V+ LPGKL+DCS PE EIF+VEGDSAGG+AK
Sbjct: 390 KVIIAAQARHAARKARELVQRKTVMSGGGLPGKLSDCSEQNPELCEIFLVEGDSAGGTAK 449
Query: 352 QGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALR 407
QGRDR FQAILPL+GKILNVE+ ++ +EEI+N+ ALG+ + ED K E LR
Sbjct: 450 QGRDRNFQAILPLKGKILNVEKAMHHKVFDSEEIKNIFTALGVTIGTEDDAKALNLEKLR 509
Query: 408 YHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDD 467
YHK++I+ DADVDG+HI TL+LTFF+RY + L ++G +Y+ PPLY V++G + Y ++D
Sbjct: 510 YHKVVIMCDADVDGSHITTLILTFFFRYMRDLIEKGYVYIATPPLYLVKKGNKKAYAWND 569
Query: 468 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
E + + +IQR+KGLGEM QLWETT+NP+ R L+Q+ IE+ +EA+ +FS
Sbjct: 570 KERDALSEEYGQGT--NIQRYKGLGEMNAEQLWETTMNPQFRTLRQVTIENGSEADRIFS 627
Query: 528 SLMGARVDTRKELIQNAANLVNLD 551
LMG V R+E I+ A +D
Sbjct: 628 MLMGDDVPPRREFIEKNAKYAKID 651
>gi|402837518|ref|ZP_10886039.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
gi|402274977|gb|EJU24144.1| DNA gyrase, B subunit [Eubacteriaceae bacterium OBRC8]
Length = 640
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/556 (47%), Positives = 379/556 (68%), Gaps = 20/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKFG + GY VSGGLHGVG+SVVNALS+SL V ++G Y Q++ G V
Sbjct: 98 VLTVLHAGGKFG--AGGYKVSGGLHGVGVSVVNALSKSLTAVVKKEGKIYKQEFEYGNAV 155
Query: 62 TTL----TCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
T + TC + + GT I F PD+++F + + T+ R+RELAFLN ++I
Sbjct: 156 TDIKQIGTCPL------EETGTCISFLPDEKIFDETV-YSFETLEHRLRELAFLNKGISI 208
Query: 118 ALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGI-TIDLALQWC 176
L ED+ Y + GG+ EYV+ +N K+PLH+ V + +DG I++A+Q+
Sbjct: 209 TL--EDNRTSDKISKTYHYTGGIIEYVKSMNKSKEPLHEDVIYFDKIDGTYDIEIAMQY- 265
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+DAYS+ + +AN+I T++GG H+ G K++LTR +N +K+ +K+KD + +GE +REG
Sbjct: 266 TDAYSENIYSFANNINTVEGGMHLIGFKSALTRVINDYARKNNYLKEKDENFTGEDIREG 325
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT IISV++P+P++EGQTKT+LGNP++R V+Q E + +LE +P I+ K + +
Sbjct: 326 LTAIISVKLPDPQYEGQTKTKLGNPQIRSSVEQVTVEEINIFLEENPACARIIMEKCMRS 385
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAKRARDL R+K +L S+SLPGKLADC P +SEIFIVEGDSAGGSAK+GR+
Sbjct: 386 QRARQAAKRARDLTRRKGILESTSLPGKLADCREKDPSKSEIFIVEGDSAGGSAKEGRNS 445
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+ QAILPLRGKILNVE+ +++ I+N+I A G G+ G ++ + LRYHKIII++D
Sbjct: 446 QNQAILPLRGKILNVEKSRLDKALQSDTIKNMITAFGCGI-GSEYDESKLRYHKIIIMSD 504
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFF+RY + L + G +Y+ PPL+ +E+GK+ Y Y EL++ +
Sbjct: 505 ADVDGAHIRTLILTFFFRYMRPLIENGYVYIAQPPLFSIEKGKKTFYAYSPEELEQKLND 564
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+ + R KGLGEM +L +TT++P+ R+L ++ +EDAAEA+ FS LMG +V+
Sbjct: 565 IGRERVL-VSRNKGLGEMDAEELGDTTMDPKNRVLLKVNLEDAAEADETFSILMGDKVEP 623
Query: 537 RKELIQNAANLV-NLD 551
R++ IQ A V NLD
Sbjct: 624 RRDFIQQNARYVENLD 639
>gi|448473611|ref|ZP_21601753.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
gi|445819123|gb|EMA68972.1| DNA gyrase subunit B [Halorubrum aidingense JCM 13560]
Length = 645
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/549 (49%), Positives = 372/549 (67%), Gaps = 9/549 (1%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALSE LEV V RDG Y +++RG+P
Sbjct: 94 VIMTVLHAGGKF--DSKSYQVSGGLHGVGVSVVNALSERLEVEVKRDGGVYRHEFARGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
V V ++ + GT IRFWPD ++F T +F +T+A R+RELAFLN +T+A
Sbjct: 152 VEDGFERVRDMEEGESTGTYIRFWPDSEIFETT-EFAFSTLANRLRELAFLNSGVAITLA 210
Query: 119 LRKEDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWC 176
+ED+D E F + GG+ E+V +LN + P+HD V + D D I +++A+Q
Sbjct: 211 DEREDADISDAGDEETFRYDGGIREFVAYLNETRTPIHDDVIYFADEDADIHVEVAMQ-A 269
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
++ ++ +AN+I T +GGTH+ G K +LTRT+N + V D D +L GE VREG
Sbjct: 270 TEELQGSVHAFANNINTREGGTHLTGFKTALTRTVNDYANEHGLVDDLDANLKGEDVREG 329
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT +ISV+ P+P+FEGQTKT+LGN EVR +V+ + E L + E +PD ++ K+ A
Sbjct: 330 LTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESATHEKLGTFFEENPDTARKVVHKAAEA 389
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AAK+A +L R+KS L S++LPGKLADC + PEE+E+F+VEGDSAGGSAKQGR+R
Sbjct: 390 ARARKAAKKAEELTRRKSALESTALPGKLADCQTRDPEEAELFVVEGDSAGGSAKQGRNR 449
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
+ QAILPL+GKILNVE+ + +N+EI+ LI A+G G+ GE+F + RYHKII++TD
Sbjct: 450 KNQAILPLKGKILNVEKHRLDRILENDEIRALITAIGAGI-GEEFDIDDARYHKIILMTD 508
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLT YR+ K L + G +Y PPLY+V + +AE ++
Sbjct: 509 ADVDGAHIRTLLLTLLYRHMKPLLEAGYVYAAQPPLYRVRYRGETYDAMTEAERDRIVEE 568
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLW+TT++PE R+LKQ+ I+DAA A+ +F+ LMG V+
Sbjct: 569 KCDGNPDQVQRFKGLGEMNPDQLWDTTMDPENRILKQINIDDAAAADRMFNVLMGDAVEP 628
Query: 537 RKELIQNAA 545
RK+ I+ A
Sbjct: 629 RKQFIKEHA 637
>gi|448540821|ref|ZP_21623742.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|448549124|ref|ZP_21627900.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|448555702|ref|ZP_21631631.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
gi|445708974|gb|ELZ60809.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-646]
gi|445713813|gb|ELZ65588.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-645]
gi|445717225|gb|ELZ68943.1| DNA gyrase subunit B [Haloferax sp. ATCC BAA-644]
Length = 639
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/548 (49%), Positives = 368/548 (67%), Gaps = 11/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + ++ G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTHRFELGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN + I+L
Sbjct: 152 QVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNSGVEISLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E +D + + + F GG+ E+V++LN K LHD V+ + + +GI +++A+Q +D
Sbjct: 211 DERTD----ESSTFRFEGGIREFVEYLNETKTALHDNVIYYDDESEGIEVEIAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+SK++ A +
Sbjct: 326 AVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAKQGRDR+F
Sbjct: 386 ARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSESELFIVEGDSAGGSAKQGRDRKF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++I++TDAD
Sbjct: 446 QAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRLILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEEC 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG V RK
Sbjct: 565 NGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMGDAVGPRK 624
Query: 539 ELIQNAAN 546
+ I++ AN
Sbjct: 625 QFIKDHAN 632
>gi|448576111|ref|ZP_21642154.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
gi|445729791|gb|ELZ81385.1| DNA gyrase subunit B [Haloferax larsenii JCM 13917]
Length = 639
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/548 (48%), Positives = 371/548 (67%), Gaps = 13/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV + RDG +H ++ +G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTELEVEIMRDGAVWHHRFEKGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V V ++ + GT I FWPD ++F T F T+ R+RELAFLN + I+L
Sbjct: 152 VQGAFEKVRDMEPDEETGTTITFWPDGEIFETT-DFTFKTLETRLRELAFLNSGVEISLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
E S+ + + + F GG+ E+V++LN K LH DV+ + + +GI +++ALQ +D
Sbjct: 211 DERSE----ESSTFMFEGGIREFVEYLNETKTALHEDVIYYEDETEGIAVEVALQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSEGMLSDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+ + E L Y E +PD+ +I+SK++ A +
Sbjct: 326 AVISVKHPDPQFEGQTKTKLGNSEVRGIVESTTHEKLGTYFEENPDMAKAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S++LPGKLADC S P +SE+F+VEGDSAGGSAKQGRDR F
Sbjct: 386 ARKAAKKAEELTRRKSALESTALPGKLADCQSRDPSKSELFVVEGDSAGGSAKQGRDREF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILP++GKILNVE+ + +N E++ LI A+G G+ G++F + +RY +II++TDAD
Sbjct: 446 QAILPIKGKILNVEKHRLDRILENNEVRALITAIGAGI-GDEFDIDDVRYQRIILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQVQYCYDDAELKKVKSSF 477
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V RG ++ + ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMTEEDRDRLIEEKC 564
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
N +QRFKGLGEM P QLWETT+NPE R+LK++ +EDAA A+ +FS LMG V+ R
Sbjct: 565 NGNPT-QVQRFKGLGEMNPDQLWETTMNPENRVLKRITVEDAAAADRMFSILMGDAVEPR 623
Query: 538 KELIQNAA 545
K+ I++ A
Sbjct: 624 KQFIKDHA 631
>gi|330997801|ref|ZP_08321636.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841]
gi|329569689|gb|EGG51454.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841]
Length = 655
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/568 (45%), Positives = 370/568 (65%), Gaps = 28/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFREGKIYQQEYECGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ + V + +GTR +FWPD +F T + + +A R+RELAFLN +TI L
Sbjct: 156 LYPVKV----VGETELRGTRQQFWPDSSIFITTT-YKYEILANRMRELAFLNAGITIILT 210
Query: 120 ----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
+ E+ P ++ GL+E+V+++++ + L +DV+ + G+ I++A+
Sbjct: 211 DMREKDENGVPRSETFHS---KDGLKEFVRYIDSSRIHLFNDVIYLNTEKQGVPIEVAIM 267
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-----NSLGKKSKTVKDKDISLS 229
+ ++ Y++ + Y N+I TI+GGTH+ G + +LTRTL + K+ + ++ + +S
Sbjct: 268 Y-NNGYTENIHSYVNNINTIEGGTHLAGFRTALTRTLKKYAEDEYAKELEKLEKNKVEIS 326
Query: 230 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 289
GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I
Sbjct: 327 GEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSYYLEEHPKEAKLI 386
Query: 290 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 349
+ K + A A +AA++AR+ V++KS + +PGKLADCS E+FIVEGDSAGGS
Sbjct: 387 VDKVILAATARVAARKARESVQRKSPMSGGGMPGKLADCSDKDAANCELFIVEGDSAGGS 446
Query: 350 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK-GEDFKK---EA 405
AKQGR R++QAILP+RGKI NVER +++EE+ N+I+ALG+ GED K+ E
Sbjct: 447 AKQGRSRQYQAILPIRGKIFNVERVMWHKAFEHEEVNNIIQALGVRFGLGEDSKEANYEK 506
Query: 406 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 465
LRY+K+II+TDADVDG+HI TLL+T FYRY L +G +Y+ PPLY+ ++GK +YCY
Sbjct: 507 LRYYKVIIMTDADVDGSHIDTLLMTLFYRYMPELIQKGHLYIATPPLYRCKKGKIEEYCY 566
Query: 466 DDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
+A+ + + S + QR+KGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+
Sbjct: 567 TEADRLRFMQQYNNGSEQGMTTQRYKGLGEMNPEQLWETTMNPETRLLKQVTIEDAAGAD 626
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
VFS LMG V R+E I+ A N+D
Sbjct: 627 YVFSMLMGEDVGPRREFIEQNATYANID 654
>gi|260584261|ref|ZP_05852008.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633]
gi|260157779|gb|EEW92848.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633]
Length = 645
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/532 (46%), Positives = 348/532 (65%), Gaps = 9/532 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L V V++DG Y Q Y RG + L V ++ GT + F
Sbjct: 122 LHGVGASVVNALSTDLTVQVFKDGNIYEQSYKRGAVLEDLKI----VGQTEKHGTSVYFV 177
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++F +D +A R+RELAFLN L + + D E+ +++ GG++ YV
Sbjct: 178 PDPEIFQETTVYDFEKLANRVRELAFLNKGLKLTIT--DLRVEEPVVKTFYYEGGIKSYV 235
Query: 145 QWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+ LN K+ L + + + DGI +++A+Q+ S Y +L + N+I T +GGTH G+
Sbjct: 236 EHLNKSKQVLFEEPIYVEGEQDGIQVEVAMQYTS-GYHTNLLSFTNNIHTYEGGTHESGM 294
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N ++ K +K+ + LSGE VREGLT ++S++ P+P+FEGQTKT+LGN E
Sbjct: 295 KTALTRVINDYARRQKLMKENEEKLSGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEA 354
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R + D+ + ++L +P V I+ K + A KA LAAKRAR++ R+KS L S+LPG
Sbjct: 355 RTITDRLFATHFDKFLMENPQVARKIVEKGILASKARLAAKRAREVTRKKSGLEISNLPG 414
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS P SEIFIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + N+
Sbjct: 415 KLADCSSNDPSVSEIFIVEGDSAGGSAKQGRSRHFQAILPIRGKILNVEKASLDKILAND 474
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF RYHK++I+TDADVDGAHIRTLL+T FYRY + + + G
Sbjct: 475 EIRSLFTAMGTGFGG-DFDLSKARYHKLVIMTDADVDGAHIRTLLITLFYRYMRPVVEAG 533
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLYK+++GKQ Y +D EL+ P++ I R+KGLGEM QLWETT
Sbjct: 534 YVYIAQPPLYKLKQGKQEFYIQNDEELEAKLKELPASPKPQISRYKGLGEMDAEQLWETT 593
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
+NP+ R + Q+ +EDAAEA+ V LMG +V+ R+E I+ + ++++ LDI
Sbjct: 594 MNPQNRSMLQVTVEDAAEADQVLDMLMGDKVEPRREFIEANSKFIDVNDLDI 645
>gi|42560566|ref|NP_975017.1| DNA gyrase subunit B [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|42492062|emb|CAE76659.1| DNA Gyrase Subunit B [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
Length = 634
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/553 (45%), Positives = 364/553 (65%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+R+ + YHQ +S G
Sbjct: 92 LVFTQLHAGGKF--DSESYKISGGLHGVGASVVNALSLYVEVEVYRNNIHYHQLFSEG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D +GT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESELQQLGHTDLRGTKVKFKPDPEIFKETVVFDYEVIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFLNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQVLIRDINRYADTVIKNNKTPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQKAREETRRKSALDSFSLPGKLADCETKDSSIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI+++I A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIITAIGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y D++L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDSQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKI 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|256384292|gb|ACU78862.1| DNA gyrase, B subunit [Mycoplasma mycoides subsp. capri str. GM12]
gi|256385125|gb|ACU79694.1| DNA gyrase, B subunit [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455935|gb|ADH22170.1| DNA gyrase, B subunit [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 634
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/553 (45%), Positives = 365/553 (66%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+R+ + YHQ +S G
Sbjct: 92 LVFTQLHAGGKF--DSETYKISGGLHGVGASVVNALSLYVEVEVYRNNIHYHQLFSEG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D +GT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESELQQLGHTDLRGTKVKFKPDPEIFKETVVFDYEIIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFLNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K +L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNNKTPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA++AR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQKAREETRRKSALDSFSLPGKLADCETKDSSIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI+++I A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIITAVGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y D++L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDSQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKI 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|116329807|ref|YP_799525.1| DNA gyrase subunit B [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116123496|gb|ABJ74767.1| DNA gyrase subunit B [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 641
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 374/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIVE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ ++ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGAEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRILVSALGTGIGEDEFNINKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|52549974|gb|AAU83823.1| DNA gyrase subunit B [uncultured archaeon GZfos34A6]
Length = 635
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/559 (47%), Positives = 376/559 (67%), Gaps = 24/559 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T LHAGGKF + Y V+GGLHGVG+SVVNALSE EV V RDG Y Q+Y GKP
Sbjct: 92 VVMTKLHAGGKF--DNKVYKVAGGLHGVGISVVNALSEWQEVEVVRDGKRYFQRYEYGKP 149
Query: 61 VTTLTCHVLPVDSKDRQ----GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLT 116
V C V + D GTR+ F PD +F +FD + +A R+RELAFLN L
Sbjct: 150 V----CEVKELSYTDENNGECGTRVTFKPDSTIFGV-YEFDAHILATRLRELAFLNRGLL 204
Query: 117 IALRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWC 176
++L+ E S ++ + + GG+ +++++N +KK LH + F + D + + + LQ+
Sbjct: 205 LSLKDERSGEDR----AFKYDGGITSFLEYINRNKKVLHSPITFEGEKDDVKVAIGLQY- 259
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D+Y++ + + N+++T++GG H+ G KA+LTR LN GK + +K ++L G+ VREG
Sbjct: 260 NDSYAENIFSFVNNVKTVEGGKHLSGFKAALTRVLNEYGKSNNMLKK--VNLDGDDVREG 317
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
L IIS+++ P+FEGQTKT+LGN EV+ +V+ V+E+L ++L+ +P D+I+ K+L A
Sbjct: 318 LAAIISLKLREPQFEGQTKTKLGNSEVKGIVESFVREHLWDFLDENPKDADAIIRKALEA 377
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA+ AR++VR+K + SLPGKLADCS P + EI+IVEGDSAGGSAKQ RD+
Sbjct: 378 SRAREAARHAREIVRKKDSF-ADSLPGKLADCSERDPAKKEIYIVEGDSAGGSAKQARDK 436
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQAILP+RGKILNVE+ + K+ EI+ LI ALG G+ G+DF + RY+KIII++D
Sbjct: 437 NFQAILPIRGKILNVEKARLDKILKSNEIRTLITALGAGI-GDDFDMQKARYNKIIIMSD 495
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY + L IYV +PPLY V++GK+++Y + D E +
Sbjct: 496 ADVDGAHIRTLLLTFFYRYMQELVTANHIYVALPPLYMVKKGKEIRYAFSDDEYVNILDD 555
Query: 477 F---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+A IQ +KGLGEM P QLWETT+NP R +K + +EDAAE + +F+ LMG
Sbjct: 556 LNVKEGDAGVKIQHYKGLGEMNPEQLWETTMNPATRGIKLVTLEDAAEVDWLFTVLMGEE 615
Query: 534 VDTRKELIQ-NAANLVNLD 551
V+ R+ I +A ++NLD
Sbjct: 616 VEPRRNFIHAHAKEVMNLD 634
>gi|83319520|ref|YP_424038.1| DNA gyrase subunit B [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283406|gb|ABC01338.1| DNA gyrase, B subunit [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 634
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/553 (45%), Positives = 364/553 (65%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF S Y +SGGLHGVG SVVNALS +EV V+R+ + YHQ +S G
Sbjct: 92 LVFTQLHAGGKF--DSETYKISGGLHGVGASVVNALSLYVEVEVYRNNIHYHQLFSEG-- 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T + + D +GT+++F PD ++F + FD+ I ++++LAFLN L I L
Sbjct: 148 -GTKESELQQLGHTDLRGTKVKFKPDPEIFKETVVFDYEVIKNKVKQLAFLNKGLKITL- 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDA 179
+D + EY F G+ +Y++ N K ++ ++ + I +++ALQ+ SD
Sbjct: 206 ---TDERIEKTVEYLFLNGILDYIKEKNETKNKINPNIFYVDSKYEDIEVEMALQYNSD- 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + ++ + N+I T +GGTH +G+K +L R +N S + ++EG+ C
Sbjct: 262 YQENIITFVNNINTHEGGTHEDGLKQALIRDINRYADTVIKNNKTPSKFSWDDIKEGMMC 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+SVR +P++EGQTKT+L NP+ ++ V+ + E+L P+ +IL K+++A KA
Sbjct: 322 ILSVRHTDPQYEGQTKTKLSNPDAKEAVNIIIGNAFEEFLLKSPEDAKAILDKNVNAQKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
+AA+RAR+ R+KS L S SLPGKLADC + +E+++VEGDSAGGSAK GR+R+FQ
Sbjct: 382 RIAAQRAREETRRKSALDSFSLPGKLADCETKDSNIAELYLVEGDSAGGSAKTGRNRKFQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGK+LNVER EA + N EI++++ A+G G+K E+ LRY KI+I+TDADV
Sbjct: 442 AILPLRGKVLNVERVTEARAFSNNEIKSIVTAVGTGIK-EELDLSKLRYKKIVIMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L G IY+ PPLYK+E GK++ Y Y D +L ++K++ +
Sbjct: 501 DGAHIRTLLLTFFYRYMKPLVANGHIYIAQPPLYKIEAGKKIAYAYTDNQLDELKNNEFN 560
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
N Y+IQR+KGLGEM P+QLWETT++P+QR + Q+ +EDA AN VFS LMG + RK
Sbjct: 561 NLKYTIQRYKGLGEMDPLQLWETTMDPQQRTMLQISLEDATLANEVFSDLMGEDPELRKI 620
Query: 540 LIQNAANLV-NLD 551
IQ+ A V N+D
Sbjct: 621 YIQDNAKFVENID 633
>gi|431380558|ref|ZP_19510939.1| DNA gyrase subunit B [Enterococcus faecium E1627]
gi|430582426|gb|ELB20853.1| DNA gyrase subunit B [Enterococcus faecium E1627]
Length = 647
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/533 (48%), Positives = 362/533 (67%), Gaps = 15/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFT 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +FD + +A RIRELAFLN + I++ + +P NEY + GG++ YV
Sbjct: 179 PDPEIFTETTEFDFSKLATRIRELAFLNRGMRISIEDKREEP---VINEYHYDGGIKSYV 235
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 236 EYLNANKTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 294
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 295 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 354
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPG
Sbjct: 355 RTVTDRLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPG 414
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 415 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 474
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 475 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 533
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QL
Sbjct: 534 YVYIAQPPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQL 593
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 594 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 646
>gi|421144701|ref|ZP_15604609.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488928|gb|EJG09775.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 635
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/558 (46%), Positives = 369/558 (66%), Gaps = 20/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++QKY RGKP
Sbjct: 90 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTIHYQKYHRGKP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V+ ++ GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 148 EEDV--KVIGACDENEHGTIVRFKADAEIFETLI-YNYFTLSNRLKELAYLNKGLTITLS 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGITIDLALQW 175
D +K + Y F GG+ +++ + D +KP + + D + +D+ +
Sbjct: 205 DLRKDEKKEE--TYKFDGGILDFLNEIVKDDTTIIEKPFY----VSSEQDNVGVDVTFTY 258
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +RE
Sbjct: 259 TT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIRE 317
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
G+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L+
Sbjct: 318 GVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKIIIEKILN 377
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRD
Sbjct: 378 SKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRD 437
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++T
Sbjct: 438 RYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMT 496
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D ELK V
Sbjct: 497 DADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVASGKQIVYAYNDLELKNVLG 556
Query: 476 SF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V
Sbjct: 557 QMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKV 616
Query: 535 DTRKELIQNAANLV-NLD 551
+ R+E I+ A V N+D
Sbjct: 617 EPRREFIEEHAEYVKNID 634
>gi|116326860|ref|YP_796580.1| DNA gyrase subunit B [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116119604|gb|ABJ77647.1| DNA gyrase subunit B [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 641
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 373/555 (67%), Gaps = 13/555 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
V+ + + DS +R GT +RF PD +FTT + F + ++ R RELAFLN L + +
Sbjct: 153 VSPVE---IKGDSSER-GTIVRFKPDATIFTT-VDFQFDILSARFRELAFLNKGLVLIVE 207
Query: 120 -RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSD 178
R+ ++ E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+ S+
Sbjct: 208 DRRRGAEGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY-SE 266
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGL 237
Y++ + + N+I GGTH+EG +A+LTRTLN KK T+ K LSGE V+EGL
Sbjct: 267 TYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTTLSKKHPTGLSGEDVKEGL 326
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K + +
Sbjct: 327 TAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCILSA 386
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGRDR
Sbjct: 387 KAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGRDRN 446
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F +RYHKI+I+TDA
Sbjct: 447 TQAILPLKGKILNVEKARLDKILSSEEIRILVSALGTGIGEDEFNINKIRYHKIMIMTDA 506
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
D+DG+HIRTLLLTFF+RY + + + G +YV PPLY ++ GK Y Y D E +++ +
Sbjct: 507 DIDGSHIRTLLLTFFFRYMRPVIERGYLYVAQPPLYLIKHGKNSTYAYSDKEKEELLKNV 566
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTR 537
+ + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V R
Sbjct: 567 GTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEVQPR 625
Query: 538 KELIQ-NAANLVNLD 551
K+ I+ NAA + NLD
Sbjct: 626 KQFIEINAAKVANLD 640
>gi|221195249|ref|ZP_03568305.1| DNA gyrase, B subunit [Atopobium rimae ATCC 49626]
gi|221185152|gb|EEE17543.1| DNA gyrase, B subunit [Atopobium rimae ATCC 49626]
Length = 649
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/571 (46%), Positives = 371/571 (64%), Gaps = 33/571 (5%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF +S Y VSGGLHGVG+SVVNALS+ + V RDG Y ++ RGK
Sbjct: 96 VVLTILHAGGKF--DNSAYKVSGGLHGVGVSVVNALSKRMIAEVKRDGKIYQMEFKRGK- 152
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
T + + GT I FWPD +F TT FD T+ R++E AFLN L I L
Sbjct: 153 ---TTQKMKEIGKTKSTGTTITFWPDDTIFETTTYNFD--TLRDRLQETAFLNKNLKIVL 207
Query: 120 RKE-DSDPEKNQYNEYFFAGGLEEYVQWLNTDK-------KPLHDVVGFRKDVDGIT--- 168
E + P + EY +AGG+ ++V++LN +K KP++ + + D T
Sbjct: 208 TDERELIP---RVVEYQYAGGIIDFVKYLNDEKTVLTGLSKPIY--IEGSSEPDAPTSQM 262
Query: 169 --IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDI 226
+++A+QW ++ ++D L +AN I T +GG H+EG + +LT+ +N G + +K+KD
Sbjct: 263 GEVEVAMQWNTE-FNDRTLSFANDIYTEEGGMHLEGFRTALTKAVNDYGTRQGILKEKDP 321
Query: 227 SLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVL 286
L+G+ +REGLT +ISV++P+P+FEGQTK +LG+ +R + ++ V L EYLE HP+
Sbjct: 322 KLTGDDIREGLTAVISVKLPDPQFEGQTKAKLGSSYMRTLTNKIVSSGLAEYLEEHPNQA 381
Query: 287 DSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSA 346
IL K+ A K LAA++AR+ R+K +L S+SLPGKLADCS PE +E+FIVEGDSA
Sbjct: 382 KEILKKATQAAKGRLAARKAREATRRKGLLESASLPGKLADCSVKDPEMTELFIVEGDSA 441
Query: 347 GGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEAL 406
GGSAK RDR QA+LPLRGKILNVER ++ I +LI A+G GV GE+F E
Sbjct: 442 GGSAKMARDRSIQAVLPLRGKILNVERVQAHRALSSDTITSLITAIGTGV-GEEFNLEKA 500
Query: 407 RYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVE-RGKQV-QYC 464
RYHKI+I+TDADVDG+HIR LLLTFFYRY K + D G IYV PPLY+++ +GK+ +Y
Sbjct: 501 RYHKIVIMTDADVDGSHIRILLLTFFYRYMKPMIDAGYIYVAQPPLYQIKAKGKKHGKYI 560
Query: 465 YDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
Y D EL F ++ Y++QR+KGLGEM P QLW TT+ P+ R+L ++ I+DA A+
Sbjct: 561 YTDEELAVEAKQFEDSSKYTVQRYKGLGEMDPEQLWSTTMEPKNRILLKVTIDDAMAADR 620
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLDHLDI 555
+ LMG +V+ RK+ IQ A V LDI
Sbjct: 621 AVADLMGNQVEKRKDFIQTHAKDVRF--LDI 649
>gi|402847272|ref|ZP_10895569.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402266748|gb|EJU16165.1| DNA gyrase, B subunit [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 655
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 362/560 (64%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS L+ TV RDG Y Q++SRG P
Sbjct: 103 VVLTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTLLKATVQRDGKIYTQEFSRGVP 160
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + + D+ GT + F PD +FT+ ++ +A R+RELAFLN +T+ L
Sbjct: 161 TTELQT----IGTTDKTGTTVLFKPDDTIFTST-EYQFKILATRLRELAFLNAGITLTLT 215
Query: 121 KEDSDPEKNQ--YNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
E E Y+ GLEE+V++++ K+ L DV+ + GI +++A+ + +
Sbjct: 216 DERQRDEAGVALTETYYSEKGLEEFVKYIDRSKEHLIEDVIHIITEKQGIPVEVAMTYNT 275
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I TI+GGTH+ G + LTRTL SK + + ++G+ REGL
Sbjct: 276 -SYNENVYSYVNNINTIEGGTHLAGFRRGLTRTLKKYATDSKLLDKVKVEITGDDFREGL 334
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T ++S++V P+FEGQTKT+LGN EV VD +V E L YLE HP I+ K + A
Sbjct: 335 TAVVSIKVAEPQFEGQTKTKLGNNEVMGAVDVAVSEALEIYLEEHPKEAKIIVDKVILAA 394
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++KS L LPGKLADCSS P SE+F+VEGDSAGG+AKQGRDR
Sbjct: 395 TARQAARKAREMVQRKSPLSGGGLPGKLADCSSKDPILSELFLVEGDSAGGTAKQGRDRE 454
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGED----FKKEALRYHKIII 413
FQAILPLRGKILNVE+ + + ++EEI+N+ ALG+ + E+ LRYHK+II
Sbjct: 455 FQAILPLRGKILNVEKAMQHKVLESEEIRNIYTALGVTIGTEEDSMALNLSKLRYHKVII 514
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY RGK+ +YC+ + + +
Sbjct: 515 MTDADVDGSHIATLILTFFFRNMRSLIENGYVYIATPPLYLCTRGKEREYCWTEQQRQAF 574
Query: 474 --KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ +QR+KGLGEM QLWETT+NPE R L+++ IE+AAEA+ +FS LMG
Sbjct: 575 IDRVGGGDENRVRVQRYKGLGEMNEEQLWETTMNPENRTLRKITIENAAEADAIFSMLMG 634
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A +D
Sbjct: 635 DDVAPRREFIEANATYARID 654
>gi|291461019|ref|ZP_06026484.2| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693]
gi|291379423|gb|EFE86941.1| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693]
Length = 639
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 369/554 (66%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G Y+QKY RGKP
Sbjct: 94 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKEGNVYYQKYYRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ + GT +RF D+ +F T I +++ T++ R++ELA+LN LTI L
Sbjct: 152 EEDV--KIIGSCEESEHGTTVRFKADRDIFETLI-YNYFTLSNRLKELAYLNRGLTITL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWCSDA 179
D E+ + Y F GG+ +++ + ++ + D + + D + +D+ + + +
Sbjct: 208 -SDLRKEEKKEETYKFDGGILDFLNEIVKEEATIVDKPFYVSSEQDNVGVDVTFTYTT-S 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +REG+
Sbjct: 266 QNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVA 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S ++P P+FEGQTK +LGN E+ +V+ V L +LE +P + ++ K L++ KA
Sbjct: 326 IVSTKIPQPQFEGQTKGKLGNSEISGIVNTIVSNSLKIFLEDNPAITKIVIEKILNSKKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRDR Q
Sbjct: 386 REAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++TDADV
Sbjct: 446 AILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-P 478
DGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK V
Sbjct: 505 DGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKNVLGQMNQ 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 565 ENKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRR 624
Query: 539 ELIQNAANLV-NLD 551
E I+ A V N+D
Sbjct: 625 EFIEEHAEYVKNID 638
>gi|332881729|ref|ZP_08449377.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357044627|ref|ZP_09106276.1| DNA gyrase, B subunit [Paraprevotella clara YIT 11840]
gi|332680368|gb|EGJ53317.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355532434|gb|EHH01818.1| DNA gyrase, B subunit [Paraprevotella clara YIT 11840]
Length = 655
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/568 (45%), Positives = 370/568 (65%), Gaps = 28/568 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSTHMLSQVFREGKIYQQEYECGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ + V + +GTR +FWPD +F T + + +A R+RELAFLN +TI L
Sbjct: 156 LYPVKV----VGETELRGTRQQFWPDGSIFITTT-YKYEILANRMRELAFLNAGITITLT 210
Query: 120 ----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
+ E+ P ++ GL+E+V+++++ + L +DV+ + G+ I++A+
Sbjct: 211 DMREKDENGVPRSETFHS---KDGLKEFVRYIDSSRIHLFNDVIYLNTEKQGVPIEVAIM 267
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTL-----NSLGKKSKTVKDKDISLS 229
+ ++ Y++ + Y N+I TI+GGTH+ G + +LTRTL + K+ + ++ + +S
Sbjct: 268 Y-NNGYTENIHSYVNNINTIEGGTHLAGFRTALTRTLKKYAEDEYAKELEKLEKNKVEIS 326
Query: 230 GEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 289
GE REGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I
Sbjct: 327 GEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVAGAVQQAVGEALSYYLEEHPKEAKLI 386
Query: 290 LSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGS 349
+ K + A A +AA++AR+ V++KS + +PGKLADCS E+FIVEGDSAGGS
Sbjct: 387 VDKVILAATARVAARKARESVQRKSPMSGGGMPGKLADCSDKDAANCELFIVEGDSAGGS 446
Query: 350 AKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVK-GEDFKK---EA 405
AKQGR R++QAILP+RGKI NVER +++EE+ N+I+ALG+ GED K+ E
Sbjct: 447 AKQGRSRQYQAILPIRGKIFNVERVMWHKAFEHEEVNNIIQALGVRFGLGEDSKEANYEK 506
Query: 406 LRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCY 465
LRY+K+II+TDADVDG+HI TLL+T FYRY L +G +Y+ PPLY+ ++GK +YCY
Sbjct: 507 LRYYKVIIMTDADVDGSHIDTLLMTLFYRYMPELIQKGHLYIATPPLYRCKKGKIEEYCY 566
Query: 466 DDAELKKVKSSFP--SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEAN 523
+A+ + + S + QR+KGLGEM P QLWETT+NPE R+LKQ+ IEDAA A+
Sbjct: 567 TEADRLRFMQQYNNGSEQGMTTQRYKGLGEMNPEQLWETTMNPETRLLKQVTIEDAAGAD 626
Query: 524 VVFSSLMGARVDTRKELIQNAANLVNLD 551
VFS LMG V R+E I+ A N+D
Sbjct: 627 YVFSMLMGEDVGPRREFIEQNATYANID 654
>gi|431798338|ref|YP_007225242.1| DNA gyrase subunit B [Echinicola vietnamensis DSM 17526]
gi|430789103|gb|AGA79232.1| DNA gyrase, B subunit [Echinicola vietnamensis DSM 17526]
Length = 652
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/561 (46%), Positives = 376/561 (67%), Gaps = 18/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ TV+R+G + Q+YSRG P
Sbjct: 99 VVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKATVYRNGKVFEQEYSRGVP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T +T + +++GT I F PD +FT ++ + TIA R+RE+AFLN + I +
Sbjct: 157 QTGVT----EIGETEKRGTIIHFVPDGDIFTVT-EYKYETIANRLREMAFLNAGVRIFFK 211
Query: 121 K-EDSDPEKN-QYNEYFFAGGLEEYVQWLN-TDKKPLHDVVGFRKDVDGITIDLALQWCS 177
+ D E N + +E+F GGL E+V++L+ T +K + + + + + + + +A+ + S
Sbjct: 212 DMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQEPIYIESEKNAVPVQVAMSYNS 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++S+ ++ Y N+I T +GGTH+ G + +LTRTL KS + +SG+ REGL
Sbjct: 272 -SFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYADKSGMLDKVKFDVSGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VD +V E L +LE HP I+ K + A
Sbjct: 331 TAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVLQYWLEEHPKEAKIIVGKVVLAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+VL LPGKLADC++T PE E+++VEGDSAGGSAKQGRDR
Sbjct: 391 QARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEVCELYLVEGDSAGGSAKQGRDRD 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKE----ALRYHKIII 413
FQAILPL+GKILNVE+ E +Y N+EI+N++ ALG+ + +KE LRYHKI+I
Sbjct: 451 FQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVKFGTAEDEKELDLTNLRYHKIVI 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDAD+DG+HIRTL+LT F+RY ++L + G +Y+ +PPLY +++GK +YC+ + E K+
Sbjct: 511 MTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPLYLLKKGKDERYCWSEDERIKL 570
Query: 474 KSSFPSNAL---YSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ IQR+KGLGEM P QLW TT++PE R LKQ+ IE AAEA+ +FS LM
Sbjct: 571 TKEMAGDGKTDNVGIQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLM 630
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A +D
Sbjct: 631 GDEVAPRREFIEKNAKYAKID 651
>gi|5817861|gb|AAD52967.1|AF167102_1 DNA gyrase beta subunit [Acholeplasma laidlawii]
Length = 615
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/531 (49%), Positives = 347/531 (65%), Gaps = 15/531 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
I+T LHAGGKF S Y VSGGLHGVG SVVN LSE V + +DG Y QKY RG P
Sbjct: 97 ILTTLHAGGKFDKGS--YKVSGGLHGVGASVVNGLSEWFVVEIHKDGTIYEQKYERGIPA 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
L S D+ GT I F D +FT + +++ T+ RI++LAFLN L + L
Sbjct: 155 YDLKVK----GSTDKSGTIISFQADPLIFTETVIYNYETLRTRIQQLAFLNKGLKLNLI- 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
D E+N+ + + GG+ EYV++LN K +H D++ K+ DGIT++LA+Q+ D+Y
Sbjct: 210 -DDRFEENKSESFHYEGGITEYVKFLNQSKSKIHNDIIYIDKEQDGITVELAMQFV-DSY 267
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S + + N+I T +GG H +G K +L+ ++ K KD S+SGE REGLT I
Sbjct: 268 SPNLHSFTNNISTTEGGMHEDGFKMALSAVISKYADDLKMKKDD--SISGEDTREGLTAI 325
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P P+FEGQTKT+LGNPEVR + Q E + +L +P +I+ K L A +A
Sbjct: 326 ISVKHPEPQFEGQTKTKLGNPEVRAITSQITSEAIERFLMENPAQAKAIVEKVLLATRAR 385
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
+AA++A+DL R+KS L + KLADC S PE+SEI+IVEGDSAGGSAKQGRD FQA
Sbjct: 386 VAARKAKDLTRRKSPLDALGFASKLADCRSKDPEKSEIYIVEGDSAGGSAKQGRDSEFQA 445
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
I+PLRGK+LNVE+ M N+EI NLI+A+G G+ E F RYHKI+I+TDADVD
Sbjct: 446 IMPLRGKVLNVEKARLDKMLSNKEIVNLIQAMGTGISDE-FDITKARYHKIVIMTDADVD 504
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLTF +R+ + L D G +Y PPLYK+ G+ QY Y++ EL ++ + +
Sbjct: 505 GAHIRTLLLTFLFRHMRPLIDAGYVYAAQPPLYKISWGRNFQYRYNEQELNELLKTIETK 564
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
SIQR+KGLGEM QLW+TT++P +R L Q+ +EDA EA+ VFS LMG
Sbjct: 565 P--SIQRYKGLGEMDAEQLWDTTMDPAKRTLLQIKLEDAIEADQVFSMLMG 613
>gi|448358868|ref|ZP_21547542.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
gi|445644548|gb|ELY97561.1| DNA gyrase subunit B [Natrialba chahannaoensis JCM 10990]
Length = 643
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/549 (47%), Positives = 366/549 (66%), Gaps = 11/549 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LE TV RDG Y + G+P
Sbjct: 94 VILTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSTRLETTVKRDGGVYKHAFEIGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVF-TTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
V + V + + GT I+FWPD+ +F TT + F +T++ R+RELAFLN + I L
Sbjct: 152 VGDME-RVRDMKPDEETGTEIQFWPDEDIFETTDMSF--STLSNRLRELAFLNSGVRITL 208
Query: 120 RKEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWC 176
R E E + Y + GG+ E+V++LN + +H D++ F + + +++A+Q
Sbjct: 209 RDERERTEAGEAVAETYEYEGGIREFVEYLNETRSAMHEDIIYFEDEDQNVRVEVAIQ-A 267
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+ ++ +AN+I T +GGTH+ G K +LTR +N G ++ + D + +L GE +REG
Sbjct: 268 TKELQGSIHAFANNINTREGGTHLTGFKTALTRVINDYGNENNLLSDIEENLKGEDIREG 327
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
LT ++SV+ P+P+FEGQTKT+LGN EVR +V+ ++ + L Y E HPD +I+ K++ A
Sbjct: 328 LTAVVSVKHPDPQFEGQTKTKLGNSEVRGIVEGAMHDCLGTYFEEHPDTAQAIVMKAVEA 387
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
KA AA++A +L R+KS L S+SLPGKLADC + PEE+E+FI EGDSAGGSAKQ R+
Sbjct: 388 AKARKAAQKAEELTRRKSALESTSLPGKLADCQTKDPEEAELFIAEGDSAGGSAKQARNP 447
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
FQA+LP++GKILNVE+ + +N+EI+N+I +G G+ G++F E +RY KII+ TD
Sbjct: 448 EFQAVLPIKGKILNVEKHRLDRILENDEIRNMITGIGAGI-GDEFDVEDVRYKKIIMATD 506
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTL+LTFFYR+ + L + G +Y PPLY++ + D E ++
Sbjct: 507 ADVDGAHIRTLMLTFFYRHMRPLLEGGYVYATQPPLYRIRYRGETYDAMTDVERDEIVEE 566
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDT 536
+QRFKGLGEM P QLWETT+NPE R+LKQ+ +EDAA A+ +FS LMG V+
Sbjct: 567 KCDGNPSQVQRFKGLGEMNPEQLWETTMNPENRILKQITVEDAAAADKMFSVLMGDAVEP 626
Query: 537 RKELIQNAA 545
RK+ I+ A
Sbjct: 627 RKQFIKENA 635
>gi|431438001|ref|ZP_19513164.1| DNA gyrase subunit B [Enterococcus faecium E1630]
gi|431760030|ref|ZP_19548634.1| DNA gyrase subunit B [Enterococcus faecium E3346]
gi|430586836|gb|ELB25078.1| DNA gyrase subunit B [Enterococcus faecium E1630]
gi|430625299|gb|ELB61939.1| DNA gyrase subunit B [Enterococcus faecium E3346]
Length = 648
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/533 (48%), Positives = 362/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V+++G Y+Q+Y RG V L ++ DR GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDRHGTTVHFT 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV
Sbjct: 179 PDPEIFTETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEETVINEYHYDGGIKSYV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 237 EYLNANKTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPG
Sbjct: 356 RTVTDRLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 416 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GE F RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 476 EIRSLFTAMGTGF-GEAFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QL
Sbjct: 535 YVYIAQPPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 595 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|160946608|ref|ZP_02093811.1| hypothetical protein PEPMIC_00566 [Parvimonas micra ATCC 33270]
gi|158446992|gb|EDP23987.1| DNA gyrase, B subunit [Parvimonas micra ATCC 33270]
Length = 638
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/556 (46%), Positives = 379/556 (68%), Gaps = 21/556 (3%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++T+LHAGGKF +++ Y VSGGLHGVG+SVVNALSE L V RDG Y Q++SRG
Sbjct: 97 VLTILHAGGKF--NNNAYQVSGGLHGVGVSVVNALSEWLIANVKRDGKLYEQQFSRGNTT 154
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+ L V + GT I F PD ++F T I ++ + R RE+AFLN + I
Sbjct: 155 SKLEV----VGTSKETGTIITFKPDSEIFDTTI-YEKEILRNRFREMAFLNKGVKIIFTD 209
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E D + E F + GG++ +V+++N +K LH+ V+ F+ +++++Q+ +D
Sbjct: 210 ERED-----FTETFHYEGGIKSFVEYMNRNKNNLHNEVIYFQGQRGDSQVEISMQY-TDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L +AN+I T +GG+H+ G + +LTRTLN G+K +KDKD +L G+ REGLT
Sbjct: 264 YSENVLTFANNIHTPEGGSHLVGFRTALTRTLNDYGRKYNLIKDKDANLQGDDTREGLTG 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S+++PNP+FEGQTK +LGN E R +V+ + + L +LE +P V I+ K+ S+ +A
Sbjct: 324 IVSIKLPNPQFEGQTKAKLGNSESRGIVETFLYDNLMTFLEENPKVGKIIIEKAQSSARA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS+L +++LPGKL+DC + +EI++VEGDSAGGSAKQGRD +FQ
Sbjct: 384 REAARKARDLTRKKSILDNTTLPGKLSDCQESDISVNEIYLVEGDSAGGSAKQGRDSKFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
A+LPL+GKI+NVE+ + EEI+++I A G G+ G+DF + LRY KI+I+TDADV
Sbjct: 444 AVLPLKGKIMNVEKARIDKILGYEEIKSMITAFGTGI-GKDFNLDNLRYGKIVIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG-KQVQYCYDDAELKKVKSSFP 478
DGAHIRTL+LTFFYRY K L ++G +Y+ PPLY + +G K V+YC+ D EL+
Sbjct: 503 DGAHIRTLILTFFYRYMKELIEQGHVYIAQPPLYGIIKGVKVVKYCWTDEELQASLDELG 562
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV--VFSSLMGARVDT 536
++ + IQR+KGLGEM P QLWETT+NPE R+ Q+ I+D ++ FS+LMG +V+
Sbjct: 563 RDS-HRIQRYKGLGEMNPAQLWETTMNPENRLFLQVNIDDEELVSIDETFSTLMGDKVEP 621
Query: 537 RKELI-QNAANLVNLD 551
R+E I QNA + N+D
Sbjct: 622 RREFIEQNAKYVENID 637
>gi|6006289|dbj|BAA84773.1| DNA gyrase B subunit [Bacteroides fragilis]
Length = 653
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/560 (46%), Positives = 371/560 (66%), Gaps = 20/560 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+R+G Y Q+Y GKP+
Sbjct: 102 MTVLHAGGKFDKGS--YKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLY 159
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL--R 120
V V D GT+ +FWPD +FT I +D+ +A R+RELA+LN L I+L R
Sbjct: 160 P----VKEVGIADHTGTKQQFWPDDSIFTETI-YDYKILASRLRELAYLNAGLRISLTDR 214
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCSDA 179
+ ++ ++ ++ GL E+V+++ + ++ L +DV+ + I I++A+ + +
Sbjct: 215 RVVNEDGSFKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNT-G 273
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
+S+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ + +SG+ REGLT
Sbjct: 274 FSENIHSYVNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTA 333
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVD-QSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+V P+FEGQTKT+LGN EV V+ + E L YLE HP +I+ K + A
Sbjct: 334 VISVKVAEPQFEGQTKTKLGNNEVNGVLPIRRYGEVLNYYLEEHPKEAKAIVDKVILAAT 393
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++AR++V++KS + LPGKLADCS P++ E+F+VEGDSAGG+AKQGR+R F
Sbjct: 394 ARHAARKAREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAF 453
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA----LRYHKIIIL 414
QAILPLRGKILNVE+ ++EEI+N+ ALG+ + E+ K A LRYHKIII+
Sbjct: 454 QAILPLRGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIM 513
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDADVDG+HI TL++TFF+RY + G +Y+ PPLY ++GK +YC+ DA+ +K
Sbjct: 514 TDADVDGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCWTDAQRQKFI 573
Query: 475 SSF---PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
++ NA+++ QR+KGLGEM QLWETT++PE RMLKQ+ I++AAEA+ +FS LMG
Sbjct: 574 DTYGGGSENAIHT-QRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMG 632
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 633 EDVGPRREFIEENATYANID 652
>gi|149278877|ref|ZP_01885012.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase)
[Pedobacter sp. BAL39]
gi|149230496|gb|EDM35880.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase)
[Pedobacter sp. BAL39]
Length = 652
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/566 (46%), Positives = 386/566 (68%), Gaps = 27/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q+Y+ GKP
Sbjct: 98 IVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKAEVHREGQIWMQEYNIGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V D++GT + F PD +FT ++ ++T+A R+REL+FLN + + L
Sbjct: 156 LYDVKL----VGETDKRGTIVTFSPDPTIFTQTTEYRYDTLAARLRELSFLNKGIKLTLT 211
Query: 121 KE-DSDPEKNQYNEYFFA-GGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLAL 173
E ++D + N E F + GGL+E+VQ+L+ + +P++ V G + +GI ++LAL
Sbjct: 212 DERETDADGNFITELFHSEGGLKEFVQFLDGGRPSLIAEPIY-VEGIK---NGIPVELAL 267
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
Q+ +D+Y++ + Y N+I T +GGTHI G + LTRTL + KS +K+ ++G+
Sbjct: 268 QY-NDSYAENVHSYVNNINTHEGGTHIAGFRRGLTRTLKAYADKSGLLKNVKFEITGDDF 326
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT ++SV+V P+FEGQTKT+LGN EV VD +V E L YLE +P I++K
Sbjct: 327 REGLTAVVSVKVQEPQFEGQTKTKLGNSEVMGAVDVAVGEALNNYLEENPREAKLIVNKV 386
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A AA++AR++V++KSV+ S LPGKLADCS + PE+ EI++VEGDSAGG+AKQG
Sbjct: 387 ILAATARAAARKAREMVQRKSVMGGSGLPGKLADCSDSDPEKCEIYLVEGDSAGGTAKQG 446
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EALRYH 409
RDR FQAILPL+GKILNVE+ E +Y+N+EI+N+ ALG+ + ED K LRYH
Sbjct: 447 RDRNFQAILPLKGKILNVEKAMEHKIYENDEIKNMFTALGVSIGTPEDDKALNLTKLRYH 506
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYD--- 466
K++I+TDAD+DG+HI TL+LTFF+RY K L + G +Y+ PPLY+V++GK+ +YC++
Sbjct: 507 KVVIMTDADIDGSHITTLILTFFFRYMKALIEAGYVYIAAPPLYQVKKGKEHEYCWNDQQ 566
Query: 467 -DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
DA ++++K + +++ IQR+KGLGEM QLW+TTLNP+ R L Q IE+AAE +
Sbjct: 567 RDAAVQRLKGAGKEESVH-IQRYKGLGEMNAEQLWDTTLNPQTRTLLQATIENAAECDHT 625
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V R++ I+ A +D
Sbjct: 626 FSMLMGDEVGPRRDFIERNAKYAKID 651
>gi|296328806|ref|ZP_06871320.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154141|gb|EFG94945.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 639
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 369/554 (66%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G+ ++QKY RGKP
Sbjct: 94 IVLTILHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGVVHYQKYHRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V+ + GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 152 EENV--KVIGSCDESEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNKGLTIIL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
D E+ + Y F GG+ +++ + + D + + D + +D+ + + +
Sbjct: 208 -SDLRKEEKKEETYKFDGGILDFLNEIVKEDTTIIEKPFYVSSEQDNVGVDVTFTYTT-S 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +REG+
Sbjct: 266 QNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVG 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L++ KA
Sbjct: 326 IVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSSLKIFLEDNPNITKIIIEKILNSKKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRDR Q
Sbjct: 386 REAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++TDADV
Sbjct: 446 AILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDIAKLRYGKIILMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-P 478
DGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK +
Sbjct: 505 DGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKNILGQMNQ 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 565 DNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRR 624
Query: 539 ELIQNAANLV-NLD 551
E I+ A V N+D
Sbjct: 625 EFIEEHAEYVKNID 638
>gi|239827049|ref|YP_002949673.1| DNA topoisomerase IV subunit B [Geobacillus sp. WCH70]
gi|239807342|gb|ACS24407.1| DNA topoisomerase IV, B subunit [Geobacillus sp. WCH70]
Length = 656
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/551 (47%), Positives = 366/551 (66%), Gaps = 24/551 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-K 59
+I+TVLHAGGKFG GY SGGLHGVG SVVNALSE L VT+ RDG Y Q++ G K
Sbjct: 95 VILTVLHAGGKFG--QGGYKTSGGLHGVGASVVNALSEWLVVTIHRDGFIYQQRFEHGGK 152
Query: 60 PVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL 119
PVTTL + + ++ GT I+F PD +F+T F++ T++ R+RE AFL L I L
Sbjct: 153 PVTTLE----KIGTTNKTGTIIQFKPDPTIFSTTT-FNYETLSERLRESAFLLKGLKIEL 207
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
D + +++ G+E +V++LN DK LH VV F + +GI ++ A Q+ +D
Sbjct: 208 ----IDERTGMRDVFYYENGIEAFVEYLNEDKDVLHPVVYFEGEQNGIEVEFAFQF-NDG 262
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ +L + N++RT DGGTH G K ++TR N +K +K+KD +L G +REGL+
Sbjct: 263 YSENVLSFVNNVRTKDGGTHEAGAKTAMTRVFNEYARKMGLLKEKDKNLEGSDIREGLSA 322
Query: 240 IISVRVPNP--EFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
IISVR+P +FEGQTK +LG E R VD V E+LT +L+ +PD+ ++ K++ A
Sbjct: 323 IISVRIPEHLLQFEGQTKGKLGTSEARSAVDAVVSEHLTYFLQENPDISTMLIKKAIRAY 382
Query: 298 KAALAAKRARDLVR--QKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+A AA++AR+ R +K + + L GKL S P+++E+++VEGDSAGGSAKQGRD
Sbjct: 383 QAREAARKAREEARSGKKRKGKETVLSGKLTPAQSRNPKKNELYLVEGDSAGGSAKQGRD 442
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
RRFQA+LPLRGK++N E+ A + KNEEI +I A+G GV G DF + + Y K+II+T
Sbjct: 443 RRFQAVLPLRGKVINTEKAKLADILKNEEINTIIHAIGGGV-GPDFSLDDINYDKVIIMT 501
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG----KQVQYCYDDAELK 471
DAD DGAHI+ LLLTFFYRY + L + G +Y+ +PPLYK+ +G + ++Y + D +LK
Sbjct: 502 DADTDGAHIQVLLLTFFYRYMRPLIEAGKVYIALPPLYKISKGTGKKEIIEYAWTDEQLK 561
Query: 472 KVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
++ F Y+IQR+KGLGEM QLWETT+NPE R L ++ IEDAA A ++LMG
Sbjct: 562 EIVKKFGKG--YTIQRYKGLGEMNADQLWETTMNPETRTLIRVRIEDAARAERRVTTLMG 619
Query: 532 ARVDTRKELIQ 542
+V+ R++ I+
Sbjct: 620 DKVEPRRKWIE 630
>gi|121889|sp|P21558.1|GYRB_HALSQ RecName: Full=DNA gyrase subunit B
gi|99223|pir||A39135 DNA topoisomerase chain B homolog - Haloferax sp
gi|149024|gb|AAB09605.1| DNA gyrase beta-subunit [Haloferax lucentense DSM 14919]
gi|1899004|gb|AAB49900.1| DNA gyrase beta-subunit [Shuttle vector pMDS20]
Length = 639
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/548 (48%), Positives = 367/548 (66%), Gaps = 11/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG++VVNALS LEV V DG + ++ G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVTVVNALSSELEVEVKHDGAVWTHRFEVGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN + I+L
Sbjct: 152 QVEEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNSGVEISL- 209
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
SD ++ + + F GG+ E+V++LN K LHD V+ + + +GI +++A+Q +D
Sbjct: 210 ---SDERTDESSTFLFEGGIREFVEYLNETKTALHDDVIYYDDESEGIEVEIAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANSHDMLDDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+SK++ A +
Sbjct: 326 AVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S P ESE+FIVEGDSAGGSAKQGRDR+F
Sbjct: 386 ARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSESELFIVEGDSAGGSAKQGRDRKF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++I++TDAD
Sbjct: 446 QAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRLILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEEC 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG V RK
Sbjct: 565 NGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMGDAVGPRK 624
Query: 539 ELIQNAAN 546
+ I++ AN
Sbjct: 625 QFIKDHAN 632
>gi|258513372|ref|YP_003189594.1| DNA gyrase subunit B [Desulfotomaculum acetoxidans DSM 771]
gi|257777077|gb|ACV60971.1| DNA gyrase, B subunit [Desulfotomaculum acetoxidans DSM 771]
Length = 635
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/529 (49%), Positives = 368/529 (69%), Gaps = 14/529 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG+SVVNALS+ LEV V R G + Q+Y RG PV+ L V GT+I F
Sbjct: 118 LHGVGVSVVNALSKWLEVEVRRQGKIFFQRYERGIPVSDLKI----VGDSSFTGTKITFS 173
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD+++F I F T+ R++ELA+LN ++ I L+ D N Y + GG++++V
Sbjct: 174 PDEEIFEDVI-FSRETLEQRLQELAYLNSRVKIYLK----DFINNLEFSYMYEGGIKDFV 228
Query: 145 QWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
+N DK L + + F ++ D + +++A+Q+ +DAY + + Y N+I TIDGGTH G
Sbjct: 229 AHINQDKILLPEAPLYFVREKDHVMVEVAMQY-TDAYFENLFSYVNNIHTIDGGTHEAGF 287
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
+++LTR +N KK+ +K+ + +LSGE +REGLT +IS++VP P+FEGQTK +LGN EV
Sbjct: 288 RSALTRVINDYAKKNNLIKNNEGNLSGEDIREGLTAVISIKVPEPQFEGQTKGKLGNSEV 347
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R +VD V E L+ +LE +P V I+ KS+SA +A AA++AR+L R+K+VL SS+LPG
Sbjct: 348 RGIVDSVVAEGLSTFLEENPAVSKKIIEKSISAFRAREAARKARELTRRKNVLESSTLPG 407
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KL+DCS+ P ESE+++VEGDSAGGSAKQGRDR+FQAILPL+GKILNVE+ + N+
Sbjct: 408 KLSDCSNRDPSESELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARLDKILNND 467
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI+ +I ALG G+ GEDF RYHK+II+TDADVDG+HIRTLLLTFFYRY + L + G
Sbjct: 468 EIRAMITALGTGI-GEDFDITKARYHKLIIMTDADVDGSHIRTLLLTFFYRYMRPLIEAG 526
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
I++ PPLY++++GK Y Y D +L+ N + SIQR+KGLGEM QLW+TT
Sbjct: 527 YIFIAQPPLYRLKKGKMEIYLYSDRDLENKLKEVGRNGI-SIQRYKGLGEMDAQQLWDTT 585
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
++PE R + + +E+AAEA+ +F +LMG RV+ R+ I ++A ++ NLD
Sbjct: 586 MDPENRTILMVELENAAEADKIFDTLMGDRVEPRRSFINKHAHDVRNLD 634
>gi|313884315|ref|ZP_07818078.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
gi|312620468|gb|EFR31894.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8]
Length = 639
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/552 (48%), Positives = 369/552 (66%), Gaps = 13/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
+ TVLHAGGKFG S Y VSGGLHGVG +VVNALS L + ++R+G +H ++ RG
Sbjct: 98 VYTVLHAGGKFGNDS--YKVSGGLHGVGAAVVNALSTHLTLEIFREGKIHHLEFERG--- 152
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+T + + + GT++ F PD +FT F + + RI+ELAFLN L I+L
Sbjct: 153 -LVTKELEVIGETELVGTKVNFVPDGTIFTDTTDFKYERLKDRIQELAFLNRGLRISL-- 209
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAY 180
ED E+ + +F+ GGL+ +++ LN KKPLH+ F + ++D I +++ALQ+ +D+Y
Sbjct: 210 EDKREERQASDSFFYEGGLKSFIEHLNHAKKPLHEEPIFLEGEMDDIAVEIALQY-TDSY 268
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
S +L +AN+I T +GG H G K +LTR +N + + +KD D +LSGE REGLT I
Sbjct: 269 STNLLSFANNIHTHEGGMHESGFKTALTRIINDYARNNNLLKDSDDNLSGEDTREGLTAI 328
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
ISV+ P+P+FEGQTKT+LGN EVR +VD+ +L +P V I+ K + A +A
Sbjct: 329 ISVKHPDPQFEGQTKTKLGNSEVRTIVDRLFTAEFNTFLLENPRVAKIIVEKGILAARAR 388
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AAKRAR++ R+KS L ++LPGKLADCSS E+ E+FIVEGDSAGGSAKQGR R +QA
Sbjct: 389 SAAKRAREMTRKKSGLEIANLPGKLADCSSKEAEKCELFIVEGDSAGGSAKQGRSRMYQA 448
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILP+RGKILNVE+ + NEEI+++ A+G G G +F +RYHK+II+TDADVD
Sbjct: 449 ILPIRGKILNVEKATMDRILANEEIRSMFTAMGTGF-GSEFDVNNVRYHKLIIMTDADVD 507
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
GAHIRTLLLT +RY + L + G +Y+ PPLY+V+ GK+ Y D EL K + + P +
Sbjct: 508 GAHIRTLLLTLIFRYMRPLIEAGYVYIAQPPLYQVKVGKKETYLDTDEELNKWRKANP-D 566
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
A Y +QR+KGLGEM QLWETT+NPE R L ++ +EDA A+ V S LMG V+ R+
Sbjct: 567 ARYKLQRYKGLGEMDYEQLWETTMNPENRRLLRVKVEDAEVADQVMSMLMGEDVEPRRAF 626
Query: 541 IQ-NAANLVNLD 551
I+ NA + NLD
Sbjct: 627 IEDNAVYVQNLD 638
>gi|210614352|ref|ZP_03290171.1| hypothetical protein CLONEX_02385 [Clostridium nexile DSM 1787]
gi|210150696|gb|EEA81705.1| hypothetical protein CLONEX_02385 [Clostridium nexile DSM 1787]
Length = 638
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 279/560 (49%), Positives = 374/560 (66%), Gaps = 18/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ TVLHAGGKFGG VSGGLHGVG SVVNALSE LEV ++ +G Y Q+Y RGK
Sbjct: 92 VVFTVLHAGGKFGGGGY--KVSGGLHGVGASVVNALSEWLEVEIYNEGKVYKQRYERGKV 149
Query: 61 VTTLTCHVLPVDSKDRQ--GTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIA 118
V L +D D Q GT++ F PDK++F + FD++T+ R RE+AFL L I
Sbjct: 150 VYKLKV----IDECDAQKTGTKVTFLPDKEIFEETV-FDYDTLKQRFREMAFLTKNLKIV 204
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
L+ D PE+ + + GG++E+VQ+LN K PL++ ++ + DG+ +++A+Q +
Sbjct: 205 LK--DERPEEPIEKTFHYEGGIKEFVQYLNKSKTPLYEQIIYCEGEKDGVAVEVAMQH-N 261
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D+YSD G+ N+I T +GGTH+ G + +LT+T N +K+K +KD + +LSGE +REGL
Sbjct: 262 DSYSDNTYGFVNNITTPEGGTHVVGFRNALTKTFNEYARKNKLLKDNEPNLSGEDIREGL 321
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV++ +P+FEGQTK +LGN E R VD V L +LE +P+V + KS+ A
Sbjct: 322 TAIISVKIEDPQFEGQTKQKLGNSEARGAVDNIVSTQLEIFLEQNPNVAKMTVEKSVMAQ 381
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++ARDL R+KS L SLPGKLADCS P EI+IVEGDSAGGSAK RDR
Sbjct: 382 RAREAARKARDLTRRKSALEGMSLPGKLADCSDKDPANCEIYIVEGDSAGGSAKTARDRA 441
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDA 417
QAILPLRGKILNVE+ +Y N EI+ +I A G G+ EDF LRYHKIII+TDA
Sbjct: 442 TQAILPLRGKILNVEKARLDKIYANAEIKAMITAFGTGIH-EDFDISKLRYHKIIIMTDA 500
Query: 418 DVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF 477
DVDGAHI TLLLTF YR+ L EG +Y+ PPLYK+E+ K+V Y Y D EL K+
Sbjct: 501 DVDGAHISTLLLTFLYRFMPELIKEGYVYLAQPPLYKLEKNKKVWYAYSDEELNKILLEV 560
Query: 478 PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVI--EDAAEANVVFSSLMGARVD 535
+ IQR+KGLGEM QLWETT++PE R+L ++ + E +E ++ F++LMG +V+
Sbjct: 561 GRDGNNKIQRYKGLGEMDAEQLWETTMDPEHRILLRVTMDEESTSELDLTFTTLMGDKVE 620
Query: 536 TRKELIQNAANLVNLDHLDI 555
R+E I+ A VN +LDI
Sbjct: 621 PRREFIEENAKYVN--NLDI 638
>gi|298374500|ref|ZP_06984458.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19]
gi|298268868|gb|EFI10523.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19]
Length = 651
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/560 (45%), Positives = 370/560 (66%), Gaps = 17/560 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q++S GKP
Sbjct: 99 VVLTVLHAGGKFDKGT--YKVSGGLHGVGVSCVNALSTYLKAEVRRNGKVHMQEFSCGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + +D+ D+ GT I F P+ +FT ++ ++ +A R+RELAFLN +T+ L
Sbjct: 157 LHDVQV----IDNTDKTGTTISFKPNGSIFTVT-EYKYDILATRLRELAFLNAGITLRLT 211
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ E + F GL+E+V++++ K+ L DV+ + GI +++AL + +
Sbjct: 212 DKRVLKEDGSFKSEVFHSDEGLKEFVRYIDRSKEKLIPDVIHIVTEKQGIPVEVALTYNT 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++++ Y N I TI+GGTH+ G + LTRTL + SK ++ + + G+ REGL
Sbjct: 272 -SYNESVFSYVNDINTIEGGTHLAGFRRGLTRTLKKYAEDSKLLEKAKVEIQGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV VD ++ E L YLE HP I+ K + A
Sbjct: 331 TAVISIKVAEPQFEGQTKTKLGNSEVTGAVDMAIGEALGYYLEEHPKEAKIIVDKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR+LV++KS L LPGKLADCSS E+F+VEGDSAGG+AKQGRDR
Sbjct: 391 QARHAARKARELVQRKSPLTGGGLPGKLADCSSKDAAICELFLVEGDSAGGTAKQGRDRN 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + ++++EEIQN+ RA+G+ V ED K E LRYHK+II
Sbjct: 451 FQAILPLRGKILNVEKAMDHKIFESEEIQNIYRAMGVTVGTEDDPKALNMEKLRYHKVII 510
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+TDADVDG+HI TL+LTFF+R ++L + G +Y+ PPLY ++GK +YC+ + + ++
Sbjct: 511 MTDADVDGSHIATLILTFFFRRMRSLIENGYVYLATPPLYLCKKGKVEEYCWTEQQRQQF 570
Query: 474 KSSFPSNALYSI--QRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMG 531
+ SI QR+KGLGEM QLW+TT+NPE R LKQ+ I++AAEA+ +F+ LMG
Sbjct: 571 ILKYGGGNENSIHTQRYKGLGEMNDHQLWDTTMNPENRTLKQITIDNAAEADQIFAMLMG 630
Query: 532 ARVDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 631 EDVGPRREFIEENATYANID 650
>gi|448624637|ref|ZP_21670585.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
gi|445749842|gb|EMA01284.1| DNA gyrase subunit B [Haloferax denitrificans ATCC 35960]
Length = 639
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/548 (48%), Positives = 368/548 (67%), Gaps = 11/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + ++ G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTHRFEFGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN + I+L
Sbjct: 152 QVDEFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNSGVEISLA 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E +D + + + F GG+ E+V++LN K LHD ++ + + +GI +++A+Q +D
Sbjct: 211 DERTD----ESSSFRFEGGIREFVEYLNETKTALHDDIIYYDDESEGIEVEIAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+SK++ A +
Sbjct: 326 AVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S++LPGKLADC S P ESE+FIVEGDSAGGSAKQGRDR+F
Sbjct: 386 ARKAAKQAEELTRRKSALESTALPGKLADCQSRDPSESELFIVEGDSAGGSAKQGRDRKF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++I++TDAD
Sbjct: 446 QAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRLILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEEC 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG V RK
Sbjct: 565 NGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMGDAVGPRK 624
Query: 539 ELIQNAAN 546
+ I++ AN
Sbjct: 625 QFIKDHAN 632
>gi|237741012|ref|ZP_04571493.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13]
gi|229431056|gb|EEO41268.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13]
Length = 635
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/558 (46%), Positives = 368/558 (65%), Gaps = 20/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++QKY RGKP
Sbjct: 90 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTIHYQKYHRGKP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ + GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 148 EEDV--KIIGACDVNEHGTIVRFKADAEIFETLI-YNYFTLSNRLKELAYLNKGLTITLS 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGITIDLALQW 175
D +K + Y F GG+ +++ + D +KP + + D + +D+ +
Sbjct: 205 DLRKDEKKEE--TYKFDGGILDFLNEIVKDDTTIIEKPFY----VSSEQDNVGVDVTFTY 258
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +RE
Sbjct: 259 TT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIRE 317
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
G+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L+
Sbjct: 318 GVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKVIIEKILN 377
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRD
Sbjct: 378 SKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRD 437
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++T
Sbjct: 438 RYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMT 496
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D ELK V
Sbjct: 497 DADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVASGKQIVYAYNDLELKNVLG 556
Query: 476 SF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V
Sbjct: 557 QMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKV 616
Query: 535 DTRKELIQNAANLV-NLD 551
+ R+E I+ A V N+D
Sbjct: 617 EPRREFIEEHAEYVKNID 634
>gi|395800428|ref|ZP_10479703.1| DNA gyrase subunit B [Flavobacterium sp. F52]
gi|395437359|gb|EJG03278.1| DNA gyrase subunit B [Flavobacterium sp. F52]
Length = 646
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/558 (45%), Positives = 367/558 (65%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+SVVNALS ++ TV+R+G Y Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSVVNALSVHMKSTVFREGKIYEQEYERGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + +++GTR F+PD +F +F ++T++ R+REL+FLN +TI
Sbjct: 155 LYP----VKQIGETEKRGTRQTFFPDDTIFQQTTEFSYDTLSARMRELSFLNKGITITFT 210
Query: 121 KEDSDPEKNQYNEYFFAG--GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ EK ++ F GL+EY+++L+ +++P+ V+ + I +++AL + +
Sbjct: 211 DKREVDEKGEFRSEVFHSDEGLKEYIRYLDGNREPIISHVISMDHEKGEIPVEVALIYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+Y++ + Y N+I T +GGTH++G ++ LTRTL S + +SG+ REGL
Sbjct: 271 -SYTENIFSYVNNINTHEGGTHLQGFRSGLTRTLKKYADASGMLDKLKFEISGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V E L YLE +P+ I+ K + A
Sbjct: 330 TAIISVKVAEPQFEGQTKTKLGNREVVSPVSQAVGEMLENYLEENPNDAKVIIQKVILAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++V++K+V+ LPGKL+DCS P E+++VEGDSAGG+AKQGRDR
Sbjct: 390 QARHAAKKAREMVQRKTVMGGGGLPGKLSDCSEQDPARCEVYLVEGDSAGGTAKQGRDRN 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGV-KGEDFKK---EALRYHKIII 413
FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ V ED K E LRYHK+II
Sbjct: 450 FQAILPLRGKILNVEKAMHHKVFENEEIRNIFTALGVTVGTAEDSKALNLEKLRYHKVII 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+R+ K L +EG +Y+ PPLY V++G + +Y ++D + +
Sbjct: 510 MCDADVDGSHISTLILTFFFRFMKELIEEGHVYIAAPPLYLVKKGNKKEYAWNDVQRDQA 569
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+A SIQR+KGLGEM QLWETT++P R L+Q+ IE AEA+ VFS LMG
Sbjct: 570 NERMGGSA--SIQRYKGLGEMNAEQLWETTMDPNFRTLRQVNIESLAEADQVFSMLMGDE 627
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 628 VPPRREFIEKNAVYANID 645
>gi|255038730|ref|YP_003089351.1| DNA gyrase subunit B [Dyadobacter fermentans DSM 18053]
gi|254951486|gb|ACT96186.1| DNA gyrase, B subunit [Dyadobacter fermentans DSM 18053]
Length = 651
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/561 (46%), Positives = 375/561 (66%), Gaps = 19/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L V R+G + Q++S GKP
Sbjct: 99 VVLTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSIHLRAEVHREGKIFEQEFSEGKP 156
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + ++ GT I F PD +FT ++ + TIA R+REL++LN + I L
Sbjct: 157 LYPTRV----IGDSEKTGTIIHFLPDATIFTVT-EYKYETIATRLRELSYLNKGIRITLE 211
Query: 121 KEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ + E Q+ E++ GL E+V +L+ ++PL + + D I +++A+ + +
Sbjct: 212 DKREEDENGQFRGEEFYSEVGLNEFVTYLDATRQPLIPEPIHMENDKGVIPVEVAMMYNT 271
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
+YS+ + Y N+I TI+GGTH+ G +A+LTRTL + +KS + + + +SG+ REGL
Sbjct: 272 -SYSENVFSYVNNINTIEGGTHVSGFRAALTRTLKNYAEKSGILAKEKVEISGDDFREGL 330
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +IS++V P+FEGQTKT+LGN EV V Q V E L YLE HP I+ K + A
Sbjct: 331 TAVISIKVAEPQFEGQTKTKLGNSEVTAAVSQVVAEMLENYLEEHPKEARVIIDKVILAA 390
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
KA +AAK+AR++V++K++L + LPGKL+DCS T P E+++VEGDSAGG+AKQGR+R
Sbjct: 391 KARIAAKKAREMVQRKNILTGTGLPGKLSDCSETDPNVCELYLVEGDSAGGTAKQGRNRA 450
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEA-----LRYHKII 412
FQAILPLRGKILNVE+ E +Y+NEEI+N+ A+G+ + G+D + A LRYHKI+
Sbjct: 451 FQAILPLRGKILNVEKAQEYKIYENEEIKNMFTAMGVQI-GKDGDERALNIDKLRYHKIV 509
Query: 413 ILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK 472
I+TDAD+DG+HIRTL+LTFF+RY K L D G IY+ PPLY V++GK+ +YC+ + + ++
Sbjct: 510 IMTDADIDGSHIRTLILTFFFRYMKILIDNGYIYIAQPPLYLVKKGKEERYCWTEQQREE 569
Query: 473 VKSSFPSNALYS--IQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ S +QR+KGLGEM QLWETT+NPE+R LKQ+ +E AAEA+ +FS LM
Sbjct: 570 AIREIGAGKEDSVNVQRYKGLGEMNAEQLWETTMNPERRSLKQVSVESAAEADHLFSMLM 629
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R++ I+ A +D
Sbjct: 630 GDEVAPRRDFIEKNAKYARVD 650
>gi|168335262|ref|ZP_02693363.1| DNA gyrase subunit B [Epulopiscium sp. 'N.t. morphotype B']
Length = 635
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/554 (48%), Positives = 372/554 (67%), Gaps = 15/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGK GY VSGGLHGVG SVVNALS L V++ G Y QK+ +G
Sbjct: 93 VVFTILHAGGK--FGGGGYKVSGGLHGVGASVVNALSSWLISRVYQHGKIYEQKFKKGHV 150
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V +L P+ + D+ GT + F PD+ +F + +D + R +E AFL L I L
Sbjct: 151 VESLH----PIGTTDQTGTFVHFLPDETIFEETV-YDFAILKKRFQETAFLTKGLKIKLI 205
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGF-RKDVDGITIDLALQWC-SD 178
E +P+ + + + GG+ E+V +LN +K P+++ + + + D ++I++A +C +D
Sbjct: 206 DERVEPKLEKI--FHYEGGVSEFVLFLNKNKTPIYENIFYCEGEKDDVSIEVA--FCHND 261
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLT 238
Y++ + +AN+I TI+GGTH+ G K +LT+T+N KK K +KD D SLSGE +REG+T
Sbjct: 262 GYNENIFSFANNINTIEGGTHLSGFKNALTKTVNDYAKKMKILKDNDKSLSGEDIREGIT 321
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+IS+++ P+FEGQTKT+L N VR +VD V E +LE +P + I+ K+ A
Sbjct: 322 GVISIKISEPKFEGQTKTKLVNTNVRTIVDNIVSEKFMIFLEQNPTIAKIIIQKATMASH 381
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AA++ARDL R+K+VL +S+LPGKLADCS P++ EI+IVEGDSAGGSAK R R+
Sbjct: 382 ARDAARKARDLTRRKNVLENSTLPGKLADCSERDPKKCEIYIVEGDSAGGSAKSARSRQN 441
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPLRGKILNVE+ M +EEI+N+I A G G+ ED E LRYHKII++TDAD
Sbjct: 442 QAILPLRGKILNVEKARLDKMLASEEIRNMITAFGAGI-NEDLNIEKLRYHKIILMTDAD 500
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLTFFYR+ + L G IY+ PPLY VE+ K+ Y Y+D EL+ + +
Sbjct: 501 VDGAHIRTLLLTFFYRFYRELITGGFIYIAQPPLYLVEKNKKKHYAYNDRELELILTEIG 560
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N + +QR+KGLGEM P QLW+TT+NP R L ++ IEDA EA+ +F++LMG +V+ R+
Sbjct: 561 RNGITRMQRYKGLGEMNPDQLWDTTMNPATRTLVKVNIEDAVEADEIFTALMGDKVEPRR 620
Query: 539 ELIQNAANLV-NLD 551
E I+ A LV NLD
Sbjct: 621 EFIKEYAKLVKNLD 634
>gi|448603022|ref|ZP_21656843.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
gi|445746218|gb|ELZ97680.1| DNA gyrase subunit B [Haloferax sulfurifontis ATCC BAA-897]
Length = 639
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/548 (48%), Positives = 368/548 (67%), Gaps = 11/548 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+TVLHAGGKF S Y VSGGLHGVG+SVVNALS LEV V RDG + ++ G+P
Sbjct: 94 VIMTVLHAGGKFDNKS--YQVSGGLHGVGVSVVNALSSELEVEVKRDGAVWTHRFEFGEP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V ++ + GT IRFWPD +F T +FD T+ R+RELAFLN + I+L
Sbjct: 152 QVDQFERVRDLEPGEDTGTTIRFWPDDGIFETT-EFDFKTLENRLRELAFLNSGVEISLT 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
E +D + + + F GG+ E+V++LN K LHD ++ + + +GI +++A+Q +D
Sbjct: 211 DERTD----ESSSFRFEGGIREFVEYLNETKTALHDDIIYYDDESEGIEVEIAMQ-ATDE 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVREGLT 238
++ +AN+I T +GGTH+ G K +LTR +N + D D +L GE VREGLT
Sbjct: 266 LQGSIHAFANNINTREGGTHLTGFKTALTRVVNDYANTHDMLDDLDGDNLRGEDVREGLT 325
Query: 239 CIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALK 298
+ISV+ P+P+FEGQTKT+LGN EVR +V+ + L + E +PD +I+SK++ A +
Sbjct: 326 AVISVKHPDPQFEGQTKTKLGNSEVRGIVESVTHQQLGTFFEENPDTATAIISKAVEAAR 385
Query: 299 AALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRF 358
A AAK+A +L R+KS L S+SLPGKLADC S P +SE+FIVEGDSAGGSAKQGRDR+F
Sbjct: 386 ARKAAKQAEELTRRKSALESTSLPGKLADCQSRDPSKSELFIVEGDSAGGSAKQGRDRKF 445
Query: 359 QAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDAD 418
QAILPL+GKILNVE+ + +N+EI+ LI A+G GV G++F E RY ++I++TDAD
Sbjct: 446 QAILPLKGKILNVEKHRLDRILENDEIRALITAIGGGV-GDEFDIEKARYQRLILMTDAD 504
Query: 419 VDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFP 478
VDGAHIRTLLLT YR+ + L + G +Y PPLY+V D+AE ++
Sbjct: 505 VDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEEC 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +QRFKGLGEM P QLW+TT+NPE R+LK++ +EDAA A+ +F+ LMG V RK
Sbjct: 565 NGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMGDAVGPRK 624
Query: 539 ELIQNAAN 546
+ I++ AN
Sbjct: 625 QFIKDHAN 632
>gi|359684325|ref|ZP_09254326.1| DNA gyrase subunit B [Leptospira santarosai str. 2000030832]
gi|410448059|ref|ZP_11302145.1| DNA gyrase, B subunit [Leptospira sp. Fiocruz LV3954]
gi|418745708|ref|ZP_13302044.1| DNA gyrase, B subunit [Leptospira santarosai str. CBC379]
gi|421112537|ref|ZP_15572994.1| DNA gyrase, B subunit [Leptospira santarosai str. JET]
gi|422004870|ref|ZP_16352081.1| DNA gyrase subunit B [Leptospira santarosai serovar Shermani str.
LT 821]
gi|410017958|gb|EKO80004.1| DNA gyrase, B subunit [Leptospira sp. Fiocruz LV3954]
gi|410793339|gb|EKR91258.1| DNA gyrase, B subunit [Leptospira santarosai str. CBC379]
gi|410802182|gb|EKS08343.1| DNA gyrase, B subunit [Leptospira santarosai str. JET]
gi|417256466|gb|EKT85886.1| DNA gyrase subunit B [Leptospira santarosai serovar Shermani str.
LT 821]
gi|456875584|gb|EMF90785.1| DNA gyrase, B subunit [Leptospira santarosai str. ST188]
Length = 641
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/558 (46%), Positives = 372/558 (66%), Gaps = 19/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G Y QKY +G P
Sbjct: 95 VVMTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSEYLEVEVHQKGKIYTQKYEKGIP 152
Query: 61 VTTLTCHVLPVDSK---DRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
V+ PV+ K +GT +RF PD +FTT + F + ++ R RELAFLN L +
Sbjct: 153 VS-------PVEIKGESSERGTIVRFKPDASIFTT-VDFQFDILSARFRELAFLNKGLVL 204
Query: 118 AL--RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQW 175
+ R+ + E NE+ F+GG+ +V+ +N +K P+H V+ F ++ D + ++++Q+
Sbjct: 205 IVEDRRRSREGENLLRNEFQFSGGIVSFVEHINENKHPMHKVIHFERNKDDVLAEISIQY 264
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKD-ISLSGEHVR 234
S+ Y++ + + N+I GGTH+EG +A+LTRTLN KK + K LSGE V+
Sbjct: 265 -SETYTENIFCFTNNINNNLGGTHLEGFRAALTRTLNDFLKKDTALSKKHPTGLSGEDVK 323
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS+++P P+F QTK +L N E++ ++ E LT + E +P++ IL K +
Sbjct: 324 EGLTAVISIKIPQPQFNSQTKEKLVNAEIKGIMQTLSSEGLTLFFEENPNITKKILEKCI 383
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
+ KA AA++ARDL R+K+VL LPGKLADCS P SE+++VEGDSAGGSAKQGR
Sbjct: 384 LSAKAREAARKARDLTRRKTVLEGGGLPGKLADCSEKDPAFSELYLVEGDSAGGSAKQGR 443
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIIL 414
DR QAILPL+GKILNVE+ + +EEI+ L+ ALG G+ ++F + +RYHKI+I+
Sbjct: 444 DRNIQAILPLKGKILNVEKARLDKILSSEEIRVLVSALGTGIGEDEFNIDKIRYHKIMIM 503
Query: 415 TDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVK 474
TDAD+DG+HIRTLLLTFF+RY + + ++G +YV PPLY ++ GK Y Y D E +++
Sbjct: 504 TDADIDGSHIRTLLLTFFFRYMRPVIEKGYLYVAQPPLYLIKHGKNSTYVYSDKEKEELL 563
Query: 475 SSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
+ + + IQR+KGLGEM P QLWETT++P R++ ++ ++D EA F+ LMG V
Sbjct: 564 KNVGTEKVV-IQRYKGLGEMNPEQLWETTMDPSNRVVLKVKLDDFVEAEETFNILMGDEV 622
Query: 535 DTRKELIQ-NAANLVNLD 551
RK+ I+ NAA + NLD
Sbjct: 623 QPRKQFIEVNAAKVANLD 640
>gi|366163637|ref|ZP_09463392.1| DNA gyrase subunit B [Acetivibrio cellulolyticus CD2]
Length = 641
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/554 (48%), Positives = 371/554 (66%), Gaps = 14/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T+LHAGGKFGG GY+VSGGLHGVG SVVNALSE LEV V+RDG Y Q+Y RG
Sbjct: 98 VVHTILHAGGKFGGE--GYTVSGGLHGVGASVVNALSEYLEVEVYRDGNIYKQRYERGNV 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + + ++ GT+ F PD +F ++F + + R RELAFLN L I L
Sbjct: 156 ATKLEV----IGTTEKTGTKTTFKPDSLIFE-EMEFSFDILLNRFRELAFLNKGLMITLI 210
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSDA 179
D PE+ + + GG+ +V+++N +K + + + DG +++++Q+ +D
Sbjct: 211 --DKRPEEPIVKKLHYEGGIISFVEYMNRNKGVIQEHPIYIDCSKDGSNVEISMQY-NDT 267
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y + + +AN+I T +GGTH+ G K ++T+ N +K +KD D +L+GE +REGLT
Sbjct: 268 YVENIFSFANNIATTEGGTHLTGFKTAITKVFNDYARKYNYLKDNDKNLAGEDIREGLTA 327
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ P+FEGQTKT+LGN E+R +V+ +V E L +LE +P V +IL K L+A +A
Sbjct: 328 VISVKLQEPQFEGQTKTKLGNSEIRSLVEFTVGEKLASFLEENPSVTKTILDKCLTAARA 387
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++ARDL R+KS L +++LPGKLADCS P EI+IVEGDSAGGSAKQGRDR+FQ
Sbjct: 388 REAARKARDLTRRKSALETTTLPGKLADCSEKDPSLCEIYIVEGDSAGGSAKQGRDRKFQ 447
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL GK+LNVE+ +Y NE++ +I ALG + G+DF E LRYHKIII+ DADV
Sbjct: 448 AILPLWGKMLNVEKSRIDKVYDNEKLLPVITALGASI-GDDFDVEKLRYHKIIIMADADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKK-VKSSFP 478
DG HIRTLLLTF +RY K L + G +Y+ PPL+K+ +GK+ Y Y++ ++ +
Sbjct: 507 DGQHIRTLLLTFMFRYMKPLVEGGYVYIAQPPLFKIAKGKEEGYAYNEKQVDNFINEKGW 566
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
SIQR+KGLGEM P QLWETT+NPE R + ++ + DA A+ +F+ LMG +V+ RK
Sbjct: 567 KKDECSIQRYKGLGEMNPEQLWETTMNPETRTMLRVELSDAIAADEIFTILMGDKVEPRK 626
Query: 539 ELIQNAANLV-NLD 551
E IQ A V NLD
Sbjct: 627 EFIQTHAKTVTNLD 640
>gi|345867569|ref|ZP_08819577.1| DNA gyrase, B subunit [Bizionia argentinensis JUB59]
gi|344047973|gb|EGV43589.1| DNA gyrase, B subunit [Bizionia argentinensis JUB59]
Length = 649
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/561 (44%), Positives = 374/561 (66%), Gaps = 22/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALSE L TV+R G + Q+Y +GKP
Sbjct: 100 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSEHLTATVYRLGEIWEQEYEKGKP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIAL- 119
+ V V D++GT I F PD +FT +++ ++T+A R+RELA+LN +T+ L
Sbjct: 158 MYP----VKKVGETDKRGTVITFKPDPTIFTHVLEYSYDTLASRMRELAYLNKGITVHLV 213
Query: 120 ----RKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQ 174
+KED E ++ GL+E++++L+ +++PL +V+ F + +G+ +++A+
Sbjct: 214 DKRHKKEDGTFEGETFHS---KEGLKEFIKFLDGNREPLTKEVIAFEGEKNGVPVEVAMI 270
Query: 175 WCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVR 234
+ + +Y++ + Y N+I T +GGTH+ G + LT TL +S + ++G+ R
Sbjct: 271 YNT-SYAENLHSYVNNINTHEGGTHLSGFRRGLTHTLKKYADESGMLDKLKFDIAGDDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT IISV+V P+FEGQTKT+LGN EV V Q+V E LT+YLE +P+ I+ K +
Sbjct: 330 EGLTAIISVKVQEPQFEGQTKTKLGNREVSASVSQAVSEMLTDYLEENPEDAKIIVQKVI 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A +A AA++AR++V++K+V+ LPGKL+DCS P + E+F+VEGDSAGG+AKQGR
Sbjct: 390 LAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCSEQDPAKCEVFLVEGDSAGGTAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHK 410
DR FQAILPLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K LRYHK
Sbjct: 450 DRAFQAILPLRGKILNVEKAMTHRVFENEEIKNIYTALGVTIGTEEDSKALNLSKLRYHK 509
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
++I+ DAD+DG+HI TL+LTFF+RY K L + G IY+ PPLY V++G + +Y + D E
Sbjct: 510 VVIMCDADIDGSHIETLILTFFFRYMKELIENGHIYIATPPLYLVKKGARKKYAWSDQER 569
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
++ + + + IQR+KGLGEM QLW+TT+NPE R L+Q+ I++ AEA+ +FS LM
Sbjct: 570 SEIMAEYGDGS--KIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVQIDNGAEADRIFSMLM 627
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 628 GDEVPPRREFIEKNAIYANID 648
>gi|297564812|ref|YP_003683784.1| DNA gyrase subunit B [Meiothermus silvanus DSM 9946]
gi|296849261|gb|ADH62276.1| DNA gyrase, B subunit [Meiothermus silvanus DSM 9946]
Length = 645
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/564 (47%), Positives = 368/564 (65%), Gaps = 28/564 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRG-- 58
+I TVLHAGGKF Y VSGGLHGVG SVVNAL+E V V+RDG Y ++SRG
Sbjct: 96 IIYTVLHAGGKF--EEGAYKVSGGLHGVGASVVNALAEYTRVEVFRDGKHYLIEFSRGEV 153
Query: 59 -KPVTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTI 117
KP+T + +K ++GTR+ F PD +F ++F+ + I R+RE++FL L +
Sbjct: 154 TKPLTQIGT------AKGKRGTRVTFLPDATIFDPGLKFEASRIRNRLREVSFLVAGLRL 207
Query: 118 ALRKEDSDPEKNQYNEYFF-AGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQW 175
+ E +Q E FF GG+ + ++L ++ L++ V + +VD +++++ L
Sbjct: 208 VFKDE-----VHQKEEVFFDKGGVASFAKFLAEGEEALYEKPVLLQGEVDVVSVEVGL-I 261
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ YS+ ++ YAN I T DGGTHI G K + TR +N+ KK+ VK D+ +G+ + E
Sbjct: 262 HTKGYSNQLVSYANMIPTKDGGTHISGFKTAYTRAINAYAKKAGLVKG-DLEPTGDDLLE 320
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
G++C+ISV++P P+FEGQTK +L NPE V + V E LT++LE +P I K+
Sbjct: 321 GVSCVISVKIPQPQFEGQTKGKLLNPEAGTAVSKVVYEKLTDWLEENPRAAKLIYEKAQR 380
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
A +A AA++AR+LVR+K L S LPGKLADC S P E+E+FIVEGDSAGGSAKQGRD
Sbjct: 381 AAQAREAARKARELVRRKDALESDELPGKLADCQSEDPAEAELFIVEGDSAGGSAKQGRD 440
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLG----VKGEDFKKEALRYHKI 411
RRFQAILPLRGKILNVE+ KN E++ ++ A+G G V+ F E LRYHKI
Sbjct: 441 RRFQAILPLRGKILNVEKAGLGKALKNAEVRAMVAAIGAGIDSNVEEAHFNLEDLRYHKI 500
Query: 412 IILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERG----KQVQYCYDD 467
II+TDADVDG+HIRTLLLTFFYRY + + + G +Y+ PPLY+++ G +VQY ++D
Sbjct: 501 IIMTDADVDGSHIRTLLLTFFYRYMRPILEGGYLYIAQPPLYRLQVGGGKNAKVQYLFND 560
Query: 468 AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFS 527
LK+ + P Y +QRFKGLGEM P QLWETT++P +R+LKQ+ +EDA AN +F
Sbjct: 561 EALKEAIAKLPERTSYEVQRFKGLGEMNPEQLWETTMDPAKRVLKQVTMEDALYANEIFE 620
Query: 528 SLMGARVDTRKELIQNAANLVNLD 551
+LMG V R+E I+ A LD
Sbjct: 621 ALMGQDVAPRREFIEENARFAQLD 644
>gi|422339824|ref|ZP_16420781.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370667|gb|EHG18047.1| DNA gyrase, B subunit [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 635
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/554 (46%), Positives = 367/554 (66%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V + G+ ++QKY RGKP
Sbjct: 90 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKAGVIHYQKYHRGKP 147
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ ++ +D GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 148 EEDV--KIIGSCDEDEHGTIVRFKADTEIFETLI-YNYFTLSNRLKELAYLNKGLTITLS 204
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
D +K + Y F GG+ +++ + + D + + D + +D+ + + +
Sbjct: 205 DLRKDEKKEE--TYKFDGGILDFLNEIVKEDTTIIEKPFYISSEQDNVGVDVTFTYTT-S 261
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +REG+
Sbjct: 262 QNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVG 321
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L++ KA
Sbjct: 322 IVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKIIIEKILNSKKA 381
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRDR Q
Sbjct: 382 REAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQ 441
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++TDADV
Sbjct: 442 AILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMTDADV 500
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-P 478
DGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D ELK V
Sbjct: 501 DGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVSSGKQIVYAYNDLELKNVLGQMNQ 560
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 561 DNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRR 620
Query: 539 ELIQNAANLV-NLD 551
E I+ A V N+D
Sbjct: 621 EFIEEHAEYVKNID 634
>gi|354605087|ref|ZP_09023076.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
gi|353347666|gb|EHB91942.1| DNA gyrase, B subunit [Alistipes indistinctus YIT 12060]
Length = 652
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/561 (45%), Positives = 373/561 (66%), Gaps = 19/561 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS L V R G + QK+S+G P
Sbjct: 100 VVLTVLHAGGKFDKDS--YKVSGGLHGVGVSCVNALSNLLVAEVHRQGKVHVQKFSKGAP 157
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNP--KLTIA 118
+ + D GT I F PD +F A ++++ ++ R+RELA+LN +L I
Sbjct: 158 LGPMEI----TGETDSHGTIITFKPDDSIFI-ATEYNYEILSSRLRELAYLNKGVRLNIT 212
Query: 119 LRKEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCS 177
++E + + +E++ GL+E+V++L+ +++ L D + + DG+ +++A+Q+ +
Sbjct: 213 DKREKDENGNYRRDEFYSTDGLKEFVKFLDENRESLIDNTIYIDTERDGVPVEVAMQYNT 272
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++S+ + Y N+I TI+GGTH+ G + +LTRTL + S + ++G+ REGL
Sbjct: 273 -SFSENVHSYVNNINTIEGGTHLTGFRRALTRTLKKYAEDSGMLSKVKFEINGDDFREGL 331
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T +ISV+V P+FEGQTKT+LGN EV VDQ++ LT YLE +P S+++K + A
Sbjct: 332 TAVISVKVQEPQFEGQTKTKLGNSEVSGAVDQAITTALTHYLEENPKDARSVVNKVILAA 391
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
A AA++AR++V++K+VL S LPGKLADCSS +++EIF VEGDSAGG+AKQGRDR
Sbjct: 392 TARHAARKAREMVQRKTVLSGSGLPGKLADCSSRDRDKTEIFFVEGDSAGGTAKQGRDRT 451
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKG-------EDFKKEALRYHK 410
FQAI+PLRGKILNVE+ + +++NEEI N+ +ALG+ G ++ E LRY K
Sbjct: 452 FQAIMPLRGKILNVEKAMKHRVWENEEISNMFKALGIVPGGDNNADDEQEVSLEKLRYGK 511
Query: 411 IIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAEL 470
+II+TDADVDG+HI TL+LTFF+R+ +L G +Y+ PPLY V++GK +YC+ + E
Sbjct: 512 VIIMTDADVDGSHIATLMLTFFFRHMNSLIQNGHVYIATPPLYLVKKGKNSRYCWTEEER 571
Query: 471 KKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLM 530
+ + + S + +QR+KGLGEM QLWETT++PE R+L+Q+ IE AAEA+ +FS LM
Sbjct: 572 EATLAEYGSKGAH-VQRYKGLGEMNAHQLWETTMSPETRILRQVTIESAAEADRIFSMLM 630
Query: 531 GARVDTRKELIQNAANLVNLD 551
G V R+E I+ A N+D
Sbjct: 631 GDDVPPRREFIERHAKYANID 651
>gi|431753187|ref|ZP_19541864.1| DNA gyrase subunit B [Enterococcus faecium E2620]
gi|430612692|gb|ELB49727.1| DNA gyrase subunit B [Enterococcus faecium E2620]
Length = 648
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/533 (48%), Positives = 362/533 (67%), Gaps = 14/533 (2%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS L+V V+++G Y+Q+Y RG V L ++ D GT + F
Sbjct: 123 LHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKI----IEQTDCHGTTVHFT 178
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD ++FT +FD + +A RIRELAFLN + I++ ED E+ NEY + GG++ YV
Sbjct: 179 PDPEIFTETTEFDFSKLATRIRELAFLNRGMRISI--EDKREEEPVINEYHYDGGIKSYV 236
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++LN +K + + V + I +++++Q+ +D Y ++ +AN+I T +GGTH G
Sbjct: 237 EYLNANKTVIFPEPVYLEGEQQDIAVEVSMQY-TDGYHSNIMSFANNIHTYEGGTHESGF 295
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K K +K+ D +L+GE VREGLT +IS++ P+P+FEGQTKT+LGN EV
Sbjct: 296 KTALTRVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEV 355
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R V D+ E+ ++L +P V I+ K L A +A LAAKRAR++ R+K L S+LPG
Sbjct: 356 RTVTDRLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPG 415
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PE+ E+FIVEGDSAGGSAKQGR+R FQAILP+RGKILNVE+ + NE
Sbjct: 416 KLADCSSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANE 475
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GEDF RYHK++I+TDADVDGAHIRTLLLT FYRY + + + G
Sbjct: 476 EIRSLFTAMGTGF-GEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAG 534
Query: 444 CIYVGVPPLYKVERGKQVQYCYD----DAELKKVKSSFPSNALYSIQRFKGLGEMMPVQL 499
+Y+ PPLY V++GK + Y + ELK+V +S P++ S+QR+KGLGEM QL
Sbjct: 535 YVYIAQPPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQL 594
Query: 500 WETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV-NLD 551
WETT++P RM+ ++ ++DA A+ +F LMG RV+ R+ I+ A+ V NLD
Sbjct: 595 WETTMDPSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLD 647
>gi|304383575|ref|ZP_07366034.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii
DSM 16973]
gi|304335099|gb|EFM01370.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii
DSM 16973]
Length = 657
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/567 (46%), Positives = 371/567 (65%), Gaps = 24/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF S Y VSGGLHGVG+S VNALS + V+RDG Y Q+Y +GKP
Sbjct: 98 VVMTVLHAGGKFDKGS--YKVSGGLHGVGVSCVNALSSHMLSQVFRDGKIYQQEYEKGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ + V + +R+GTR +FWPD +FTT ++ + IA R+RELA+LN + I L+
Sbjct: 156 LYPVKV----VGTTERRGTRQQFWPDATIFTTT-KYKWDIIANRMRELAYLNAGIKITLK 210
Query: 121 KEDSDPEKNQYNEYFFA-GGLEEYVQWLNTDKKPLHD-VVGFRKDVDGITIDLALQWCSD 178
D E E F A GL+E+V++++ + L D V+ + + GI I++A+ + +D
Sbjct: 211 DMRPDEEGKLREETFHAEDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAVMYNND 270
Query: 179 AYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKK----SKTVKDKDISLSGEHVR 234
YS+ + Y N+I TI+GGTH+ G + +LTRTL + SK ++ I ++GE R
Sbjct: 271 -YSENIHSYVNNINTIEGGTHLTGFRMALTRTLKTYADADPVISKQIEKAKIEIAGEDFR 329
Query: 235 EGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSL 294
EGLT +IS++V P+FEGQTKT+LGN EV V Q+V E L+ YLE HP I K +
Sbjct: 330 EGLTAVISIKVAEPQFEGQTKTKLGNSEVSGAVQQAVGEALSNYLEEHPKEAKLICDKVV 389
Query: 295 SALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGR 354
A A +AA++AR+ V++K+V+ LPGKLADCS+ P++ EIF+VEGDSAGGSAKQGR
Sbjct: 390 LAATARIAARKARESVQRKNVMSGGGLPGKLADCSNRDPKKCEIFLVEGDSAGGSAKQGR 449
Query: 355 DRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGL--GVKGEDFKK---EALRYH 409
DR QAILPL+GKILNVE+ +++ E + N+I+++G+ GV+GE K+ + LRY
Sbjct: 450 DRYTQAILPLKGKILNVEKVQWHKVFEAESVMNIIQSIGVRFGVEGEGDKEANIDKLRYD 509
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQV-QYCYDD- 467
KIII+TDADVDG+HI TL++T FYR+ + EG +Y+ PPLY +V +YCY +
Sbjct: 510 KIIIMTDADVDGSHIDTLIMTLFYRFMPRVIQEGHLYIATPPLYLCTYKNKVKEYCYTEQ 569
Query: 468 ---AELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANV 524
A L K QR+KGLGEM P QLWETT++P R+LKQ+ IE+AA+A+
Sbjct: 570 QRQAFLDKYGDGVEDGKSIHTQRYKGLGEMNPEQLWETTMDPNTRLLKQVNIENAAKADE 629
Query: 525 VFSSLMGARVDTRKELIQNAANLVNLD 551
+FS LMG V+ R+E I+ A N+D
Sbjct: 630 IFSMLMGDDVEPRREFIEQNATYANID 656
>gi|19705416|ref|NP_602911.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713409|gb|AAL94210.1| DNA gyrase subunit B [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 639
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 369/554 (66%), Gaps = 12/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G+ ++QKY RGKP
Sbjct: 94 IVLTILHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGVVHYQKYHRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V+ + GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 152 EEDV--KVIGSCDESEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNKGLTIIL- 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYV-QWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDA 179
D E+ + Y F GG+ +++ + + D + + D + +D+ + + +
Sbjct: 208 -SDLRKEEKKEETYKFDGGILDFLNEIVKEDTTIIEKPFYVSSEQDNVGVDVTFTYTT-S 265
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +REG+
Sbjct: 266 QNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVG 325
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L++ KA
Sbjct: 326 IVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSSLKIFLEDNPNITKIIIEKILNSKKA 385
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRDR Q
Sbjct: 386 REAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQ 445
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++TDADV
Sbjct: 446 AILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDIAKLRYGKIILMTDADV 504
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSF-P 478
DGAHIRTL+LTF YRY K L EG IY+ PPLYKV GKQ+ Y Y+D ELK +
Sbjct: 505 DGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKNILGQMNQ 564
Query: 479 SNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V+ R+
Sbjct: 565 DNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRR 624
Query: 539 ELIQNAANLV-NLD 551
E I+ A V N+D
Sbjct: 625 EFIEEHAEYVKNID 638
>gi|256846674|ref|ZP_05552130.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294784381|ref|ZP_06749672.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
gi|256717894|gb|EEU31451.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_36A2]
gi|294487953|gb|EFG35308.1| DNA gyrase, B subunit [Fusobacterium sp. 3_1_27]
Length = 639
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 262/558 (46%), Positives = 368/558 (65%), Gaps = 20/558 (3%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+SVVNALSE LEV V ++G ++QKY RGKP
Sbjct: 94 IVLTVLHAGGKF--ENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGTIHYQKYHRGKP 151
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V+ + GT +RF D ++F T I +++ T++ R++ELA+LN LTI L
Sbjct: 152 EEDV--KVIGTCDESEHGTIVRFKADGEIFETLI-YNYFTLSNRLKELAYLNKGLTITLS 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTD-----KKPLHDVVGFRKDVDGITIDLALQW 175
D +K + Y F GG+ +++ + D +KP + + D + +D+ +
Sbjct: 209 DLRKDEKKEE--TYKFDGGILDFLNEIVKDDTTIIEKPFY----VSSEQDNVGVDVTFTY 262
Query: 176 CSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVRE 235
+ + ++ + + N+I T +GGTH++G + +LT+ +N +GK +KDKD L G +RE
Sbjct: 263 TT-SQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIRE 321
Query: 236 GLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLS 295
G+ I+S ++P P+FEGQTK +LGN EV +V+ V L +LE +P++ I+ K L+
Sbjct: 322 GVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSNSLKIFLEDNPNITKIIIEKILN 381
Query: 296 ALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRD 355
+ KA AA++AR+LV +KSVL SLPGKLADC+S EE EIFIVEGDSAGGSAKQGRD
Sbjct: 382 SKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRD 441
Query: 356 RRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILT 415
R QAILPLRGKI+NVE+ ++ EI+ ++ A G + GE F LRY KII++T
Sbjct: 442 RYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSI-GETFDISKLRYGKIILMT 500
Query: 416 DADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKS 475
DADVDGAHIRTL+LTF YRY L G +Y+ PPLYKV GKQ+ Y Y+D ELK V
Sbjct: 501 DADVDGAHIRTLILTFLYRYMIDLIYAGNVYIACPPLYKVASGKQIVYAYNDLELKNVLG 560
Query: 476 SF-PSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARV 534
N Y+IQR+KGLGEM P QLWETT+NP+ R+L ++ I++A EA+++F LMG +V
Sbjct: 561 QMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKV 620
Query: 535 DTRKELIQNAANLV-NLD 551
+ R+E I+ A V N+D
Sbjct: 621 EPRREFIEEHAEYVKNID 638
>gi|289431959|ref|YP_003461832.1| DNA gyrase subunit beta [Dehalococcoides sp. GT]
gi|288945679|gb|ADC73376.1| DNA gyrase, B subunit [Dehalococcoides sp. GT]
Length = 642
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/552 (48%), Positives = 365/552 (66%), Gaps = 16/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAG KFGG + Y VSGGLHGVG SVVNALSE V V R+G Y Q Y RGKP
Sbjct: 104 VMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALSEWTTVKVRRNGKIYQQSYLRGKPS 161
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V + GT F D Q+F+T ++D T+ R+RE+A+LN L + +
Sbjct: 162 TPLE----EVGVSEGSGTTTIFMADSQIFSTT-EYDFETLTDRLREIAYLNKGLEVYIYD 216
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A+Q+ +D Y
Sbjct: 217 EKSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVAIQY-NDGY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD+ L +AN + T+DGGTH+ G +++LTR N KSK +KD D +L G+ VREG+ I
Sbjct: 272 SDSTLTFANCVNTVDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDDVREGIVAI 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K ++A KA
Sbjct: 332 VSVKLPEPQFEGQTKGKLGNIEIKSFVESAVAEQLSLYLEEHPDDTKRILEKCITAAKAR 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQGR+RRFQA
Sbjct: 392 EAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQGRNRRFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++++TDADVD
Sbjct: 452 ILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGID-NDFDPSKLRYNRLVLMTDADVD 510
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE + + + S
Sbjct: 511 GSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSTEHWVYNDAEKEAILAQTKST 570
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ IQR+KGLGEM QLW TT++P R L ++ +EDAA+A+ +F+ LMG V RK
Sbjct: 571 KV-DIQRYKGLGEMSAEQLWRTTMDPASRTLLEVKVEDAAKADQIFNLLMGGEVAPRKAF 629
Query: 541 IQNAANLV-NLD 551
IQ+ + V NLD
Sbjct: 630 IQSHSRTVKNLD 641
>gi|427392992|ref|ZP_18886895.1| DNA gyrase subunit B [Alloiococcus otitis ATCC 51267]
gi|425730923|gb|EKU93753.1| DNA gyrase subunit B [Alloiococcus otitis ATCC 51267]
Length = 649
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/529 (48%), Positives = 353/529 (66%), Gaps = 10/529 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALSE L+V V RDG Y Q Y RG + L V D GT + F
Sbjct: 128 LHGVGSSVVNALSEYLQVQVHRDGKIYQQVYKRGLVDSDLEV----VGETDHTGTIVTFK 183
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
D +F +D +T+A RIRELAFLN L I++ ED Q Y F GG+ YV
Sbjct: 184 ADSLIFKDTTSYDFDTLATRIRELAFLNRGLNISI--EDKRQADGQSLNYHFEGGISSYV 241
Query: 145 QWLNTDKKPLHDVVGFRK-DVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
LN+ ++ L++ F + + +GI++++ALQ +D++ ++ +AN+I T +GG HI G
Sbjct: 242 DHLNSKREVLYETPIFLEGEEEGISVEIALQH-TDSFHTNLMSFANNIHTYEGGMHISGF 300
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K+ +++ + + +G+ VREGLT ++S++ P+P+FEGQTKT+LGN EV
Sbjct: 301 KTALTRAVNDYARKNNLLRESEDNFTGDDVREGLTVVLSIKHPDPQFEGQTKTKLGNSEV 360
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R ++D+ ++ YL +P V I+ K+L A KA AAKRAR++ R+KS L S+LPG
Sbjct: 361 RGIIDRLFSQHFERYLMENPKVGKRIVDKALLASKARQAAKRAREVTRKKSGLEISNLPG 420
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLADCSS PEESE+FIVEGDSAGGSAKQGR R FQAILP+RGKILNVE+ + NE
Sbjct: 421 KLADCSSKDPEESELFIVEGDSAGGSAKQGRSRIFQAILPIRGKILNVEKASIDRILANE 480
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G GE+F E RY+K+II+TDADVDGAHIRTL+LT YRY + L + G
Sbjct: 481 EIRSLFTAMGTGF-GEEFNVEEARYNKLIIMTDADVDGAHIRTLVLTLLYRYMRPLIEAG 539
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLY+V++GK+V+Y D EL P + S+QR+KGLGEM QLWETT
Sbjct: 540 FVYIAQPPLYQVKQGKKVKYLDSDRELDSYLKEIPDSPKPSVQRYKGLGEMDAEQLWETT 599
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELI-QNAANLVNLD 551
+NPE R L ++ ++DA EA+ +F LMG V R++ I +NA + N+D
Sbjct: 600 MNPEHRRLLRVDVDDAIEADTIFDMLMGEDVKPRRDFIKENARYVENID 648
>gi|89890612|ref|ZP_01202122.1| DNA gyrase subunit B [Flavobacteria bacterium BBFL7]
gi|89517527|gb|EAS20184.1| DNA gyrase subunit B [Flavobacteria bacterium BBFL7]
Length = 646
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/558 (44%), Positives = 369/558 (66%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS+ L+ TV+RDG + Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSDHLKATVYRDGKIWEQEYERGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D++GT + F PD+ +FT +F + T+A R+RELAFLN + + L
Sbjct: 155 MYP----VKAIGDTDKRGTDVTFLPDRSIFTQTTEFSYETLANRLRELAFLNKGIKVILT 210
Query: 121 -KEDSDPEKNQYNEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
K D + N + F + GL+E++++L+ ++P+ DV+ + +GI +++A+ + +
Sbjct: 211 DKRQKDEDGNFVTDVFQSEEGLKEFIRFLDDTRQPIIADVISMEGEKNGIPVEVAMIY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D+Y++ + Y N+I T +GGTH+ G + LT TL S + ++G+ REGL
Sbjct: 270 DSYAENLHSYVNNINTHEGGTHLAGFRRGLTSTLKKYADASGLLDKLKFDIAGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V + L YLE +P+ +I+ K + A
Sbjct: 330 TAIISVKVQEPQFEGQTKTKLGNREVTSAVSQAVSQMLEAYLEENPNDAKTIVQKVILAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+V+ LPGKL+DCS T P E+F+VEGDSAGG+AKQGRDR
Sbjct: 390 QARHAARKAREMVQRKTVMSGGGLPGKLSDCSETDPTLCEVFLVEGDSAGGTAKQGRDRE 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAI+PLRGKILNVE+ +++NEEI+N+ ALG+ + E+ K E LRYHK++I
Sbjct: 450 FQAIMPLRGKILNVEKAMTHKVFENEEIRNIYTALGVTIGTEEDSKALNLEKLRYHKVVI 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DAD+DG+HI TL+LTFF+RY + + ++G IY+ PPLY V++G + +Y + D E +
Sbjct: 510 MCDADIDGSHIATLILTFFFRYMREMIEKGYIYIATPPLYLVKKGAKKRYAWSDKERDDI 569
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
SF +IQR+KGLGEM QLW+TT+NPE R L+Q+ I+ EA+ +FS LMG
Sbjct: 570 ADSFGGGV--NIQRYKGLGEMNADQLWDTTMNPEFRTLRQVTIDSLPEADRIFSMLMGDE 627
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 628 VPPRREFIEKNAIYANID 645
>gi|73747960|ref|YP_307199.1| DNA gyrase subunit B [Dehalococcoides sp. CBDB1]
gi|147668656|ref|YP_001213474.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452202849|ref|YP_007482982.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452204330|ref|YP_007484459.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
gi|73659676|emb|CAI82283.1| DNA gyrase, subunit B [Dehalococcoides sp. CBDB1]
gi|146269604|gb|ABQ16596.1| DNA gyrase subunit B [Dehalococcoides sp. BAV1]
gi|452109908|gb|AGG05640.1| DNA gyrase subunit B [Dehalococcoides mccartyi DCMB5]
gi|452111386|gb|AGG07117.1| DNA gyrase subunit B [Dehalococcoides mccartyi BTF08]
Length = 642
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/552 (48%), Positives = 365/552 (66%), Gaps = 16/552 (2%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAG KFGG + Y VSGGLHGVG SVVNALSE V V R+G Y Q Y RGKP
Sbjct: 104 VMTVLHAGAKFGGKT--YQVSGGLHGVGASVVNALSEWTTVKVRRNGKIYQQSYLRGKPS 161
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
T L V + GT F D Q+F+T ++D T+ R+RE+A+LN L + +
Sbjct: 162 TPLE----EVGVSEGSGTTTIFMADSQIFSTT-EYDFETLTDRLREIAYLNKGLEVYIYD 216
Query: 122 EDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAY 180
E SD E+ Y+F GG+ +V+ LN +++ H + K D +++A+Q+ +D Y
Sbjct: 217 EKSDQERT----YYFEGGITGFVRHLNRNREVRHRQPIYITKKSDSTILEVAIQY-NDGY 271
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
SD+ L +AN + T+DGGTH+ G +++LTR N KSK +KD D +L G+ VREG+ I
Sbjct: 272 SDSTLTFANCVNTVDGGTHLTGFRSALTRAFNDYAHKSKFLKDTDPNLMGDDVREGIVAI 331
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++P P+FEGQTK +LGN E++ V+ +V E L+ YLE HPD IL K ++A KA
Sbjct: 332 VSVKLPEPQFEGQTKGKLGNIEIKSFVESAVAEQLSLYLEEHPDDTKRILEKCITAAKAR 391
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++ARDL+ +KS L + +LPGKLADCS E+F+VEGDSAGGSAKQGR+RRFQA
Sbjct: 392 EAARKARDLIIRKSALDTGTLPGKLADCSERDASLCELFLVEGDSAGGSAKQGRNRRFQA 451
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ M +EEI+ +I AL G+ DF LRY++++++TDADVD
Sbjct: 452 ILPLRGKILNVEKASPDKMLAHEEIRAIITALAAGID-NDFDPSKLRYNRLVLMTDADVD 510
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFF+R+ L E +++ PPLYK++ G + Y+DAE + + + S
Sbjct: 511 GSHIRTLLLTFFFRHMPRLITESHLFIAQPPLYKIKIGSTEHWVYNDAEKEAILAQTKST 570
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
+ IQR+KGLGEM QLW TT++P R L ++ +EDAA+A+ +F+ LMG V RK
Sbjct: 571 KV-DIQRYKGLGEMSAEQLWRTTMDPASRTLLEVKVEDAAKADQIFNLLMGGEVAPRKAF 629
Query: 541 IQNAANLV-NLD 551
IQ+ + V NLD
Sbjct: 630 IQSHSRTVKNLD 641
>gi|183219432|ref|YP_001837428.1| DNA gyrase subunit B [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909578|ref|YP_001961133.1| DNA gyrase subunit B [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774254|gb|ABZ92555.1| DNA gyrase subunit B [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777854|gb|ABZ96152.1| DNA gyrase subunit B [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 639
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/553 (47%), Positives = 365/553 (66%), Gaps = 13/553 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T+LHAGGKF + Y VSGGLHGVG+SVVNALS LEV V ++G ++QKY G P
Sbjct: 97 VVLTILHAGGKF--ENDAYKVSGGLHGVGVSVVNALSTYLEVEVHQEGKLHYQKYQAGVP 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
V + + +GT +RF PD +FTT + F +T++ R RE+AFLN L I R
Sbjct: 155 VEDVKI----IGETTHRGTVVRFRPDHTIFTT-VDFSFDTLSARFREIAFLNKGLLI--R 207
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDGITIDLALQWCSDAY 180
ED E+ +E+ F GG+ +V+++ K PLH V+ F + + + ++ALQ+C D Y
Sbjct: 208 IEDQRKEEFAKHEFKFDGGIVSFVEYITESKHPLHKVLHFVGEKENVWAEIALQYC-DTY 266
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTV-KDKDISLSGEHVREGLTC 239
S+ + + N+I GGTH+EG + +LTRTLN KK +T+ K + L G+ ++EGL
Sbjct: 267 SENIFCFTNAINNNLGGTHLEGFRTALTRTLNDHLKKDQTLFKKQPNGLQGDDIKEGLCA 326
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++P P+F QTK +L N EV+ ++ E L Y E +P ++ IL K + A KA
Sbjct: 327 VISIKIPQPQFNSQTKEKLVNAEVKGLMQTITGEGLNRYFEENPAIIKKILEKCILASKA 386
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA+RARDL R+K+VL LPGKLADCS PE E+F+VEGDSAGGSAKQGRDR Q
Sbjct: 387 REAARRARDLTRRKTVLEGGGLPGKLADCSEKDPEHCELFLVEGDSAGGSAKQGRDRNTQ 446
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKILNVE+ + NEEI+ LI +G G+ ++F E LRY KIII+TDADV
Sbjct: 447 AILPLKGKILNVEKARLDKILSNEEIRTLITVMGTGIGDDEFNVEKLRYRKIIIMTDADV 506
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DG+HIRTLLLTFF+RY K + + G +YV PPLY ++ GK+ Y Y D E ++ + P+
Sbjct: 507 DGSHIRTLLLTFFFRYMKPVIERGSLYVAQPPLYLLKFGKEAVYVYSDREKDEILKARPN 566
Query: 480 NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKE 539
+ + IQR+KGLGEM P QLW+TT++P++R++ Q+ ++D EA F+ LMG V R+
Sbjct: 567 DKVV-IQRYKGLGEMNPEQLWDTTMDPKERVMLQVKLQDFVEAEDTFNILMGDEVSPRRR 625
Query: 540 LIQ-NAANLVNLD 551
I+ N+ + NLD
Sbjct: 626 FIEANSYKVANLD 638
>gi|167038684|ref|YP_001661669.1| DNA gyrase subunit B [Thermoanaerobacter sp. X514]
gi|300913756|ref|ZP_07131073.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561]
gi|307723227|ref|YP_003902978.1| DNA gyrase subunit B [Thermoanaerobacter sp. X513]
gi|166852924|gb|ABY91333.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter sp. X514]
gi|300890441|gb|EFK85586.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561]
gi|307580288|gb|ADN53687.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X513]
Length = 633
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/552 (47%), Positives = 380/552 (68%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q Y RG P T
Sbjct: 96 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVVVKQRGKIFRQTYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT I F PDK++F + F+++ +A R+RELAFLN + I L E
Sbjct: 154 DLEIIG----ETEETGTTITFKPDKEIFEETV-FNYDVLAQRLRELAFLNKGINIRLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++ +Q+ +D Y
Sbjct: 209 -RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEVCMQY-NDTY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G K++LT+ +N +K +KD + +L GE VREGLT I
Sbjct: 263 TENIFSFANNIDTREGGTHLVGFKSALTKVINDYARKYGIIKDNEKNLQGEDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+ K+ A +A
Sbjct: 323 VSVKLKNPQFEGQTKTKLGNSEMRSIVENVVIEKLSAFLEENPSVAKVIVEKATQAARAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK GR+ RFQA
Sbjct: 383 EAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAKTGRNSRFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK++I+TDADVD
Sbjct: 443 ILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKVVIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL ++ +
Sbjct: 502 GSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDRELDRILNEIGRE 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 562 N-YTVQRYKGLGEMNADQLWDTTMDPEKRTMLKVTLEDAIAADEIFTILMGDKVEPRREF 620
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 621 IEKHAKTVRNLD 632
>gi|374339279|ref|YP_005096015.1| type IIA topoisomerase subunit B [Marinitoga piezophila KA3]
gi|372100813|gb|AEX84717.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B
subunit [Marinitoga piezophila KA3]
Length = 642
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/567 (46%), Positives = 365/567 (64%), Gaps = 27/567 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
++ T LHAGGKF ++ Y +SGGLHGVG SVVNALSE LEV V R+G Y+QKYSRGK
Sbjct: 91 VVFTTLHAGGKF--NTETYKISGGLHGVGASVVNALSEFLEVWVHRNGKIYYQKYSRGKK 148
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTA-IQFDHNTIAGRIRELAFLNPKLTIAL 119
VT + + ++ GT I+F PD ++F I+ + I R+RELAFLNP L I
Sbjct: 149 VTEVEI----LGETNKTGTHIKFKPDAEIFENGDIEVEGQIIENRLRELAFLNPGLEI-- 202
Query: 120 RKEDSDPEKNQYNEYFFAGGLEEYVQWL--NTDKKPLHDVVGFRK---------DVDGIT 168
E D ++N+ ++ F GL E++ +L K P+H+ F K + I
Sbjct: 203 --EFIDEKRNKKQKFLFKEGLSEFLDYLIKKNKKAPIHESPIFGKGSFKNPRGENFSDII 260
Query: 169 IDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISL 228
++ ++ + + Y + + N+IRT++GG H K +LTR +N KK+ +K+KD +
Sbjct: 261 VEFSMMYTRNDYPH-IFSFVNNIRTVEGGEHESAFKTTLTRVMNDYAKKAGFLKEKDPNF 319
Query: 229 SGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDS 288
+GE VREGL I+S+++P+P FEGQTK +LG+ EVR V+ V EYL +YL+ HP
Sbjct: 320 TGEDVREGLIAILSIKLPDPVFEGQTKAKLGSKEVRAAVNDIVAEYLVKYLDSHPKDTKL 379
Query: 289 ILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGG 348
I + A +A ++A++AR+ V++KS+ +S LPGKLADC+S +ESE+FIVEG+SAGG
Sbjct: 380 IFERIKEAARARISARKAREKVKRKSIFENSPLPGKLADCTSNNLDESELFIVEGNSAGG 439
Query: 349 SAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRY 408
+AK RDR FQAILPLRGKI+NVE+ D + KNE++ N+I A+G G+ GE+F LRY
Sbjct: 440 NAKTARDRNFQAILPLRGKIINVEKHDIERLMKNEQVANIISAIGTGI-GENFDISKLRY 498
Query: 409 HKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDA 468
KIII+TDADVDGAHIRTLLL FYR+ L G IY PPLYK + GK +Y Y DA
Sbjct: 499 GKIIIMTDADVDGAHIRTLLLALFYRFMPELLKAGRIYAAQPPLYKFKSGKFEKYLYSDA 558
Query: 469 ELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSS 528
EL+++K F YS+QR+KGLGEM QLWETT+NPE+R L Q+ I+D E +
Sbjct: 559 ELEELKKEFEGKK-YSLQRYKGLGEMNSDQLWETTMNPEKRKLIQINIDDIVETEEILEI 617
Query: 529 LMGARVDTRKELIQNAANLVNLDHLDI 555
LMG+ R+E I+ A + + LDI
Sbjct: 618 LMGSDPSARREFIEEHA--LKVKELDI 642
>gi|297543507|ref|YP_003675809.1| DNA gyrase subunit B [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841282|gb|ADH59798.1| DNA gyrase, B subunit [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 633
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/552 (47%), Positives = 380/552 (68%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q Y RG P T
Sbjct: 96 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVVVKQRGKIFRQTYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT I F PDK++F + F+++ +A R+RELAFLN + I L E
Sbjct: 154 DLEIIG----ETEETGTTITFKPDKEIFEETV-FNYDVLAQRLRELAFLNKGINIKLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++ +Q+ +D Y
Sbjct: 209 -RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEVCMQY-NDTY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G K++LT+ +N +K +KD + +L GE VREGLT I
Sbjct: 263 TENIFSFANNIDTREGGTHLVGFKSALTKVINDYARKYGIIKDNEKNLQGEDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+ K+ A +A
Sbjct: 323 VSVKLKNPQFEGQTKTKLGNSEMRSIVENVVIEKLSAFLEENPSVAKVIVEKATQAARAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK GR+ RFQA
Sbjct: 383 EAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAKTGRNSRFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK++I+TDADVD
Sbjct: 443 ILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKVVIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL ++ +
Sbjct: 502 GSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDKELDRILNEIGRE 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 562 N-YTVQRYKGLGEMNADQLWDTTMDPEKRTILKVTLEDAIAADEIFTILMGDKVEPRREF 620
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 621 IERYAKTVRNLD 632
>gi|170756292|ref|YP_001779632.1| DNA gyrase subunit B [Clostridium botulinum B1 str. Okra]
gi|429247632|ref|ZP_19210871.1| DNA gyrase subunit B [Clostridium botulinum CFSAN001628]
gi|169121504|gb|ACA45340.1| DNA gyrase, B subunit [Clostridium botulinum B1 str. Okra]
gi|428755345|gb|EKX77977.1| DNA gyrase subunit B [Clostridium botulinum CFSAN001628]
Length = 637
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/554 (49%), Positives = 385/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE EV V R+G + QK+ RG
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCEVEVRREGHIWKQKFERGIT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEDHGTKIYFKPDIEIFD-ELEFEYDTLAHRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + ++ DG +++A+Q+ +D
Sbjct: 209 DERYDKKEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDENKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRVINDYARKFNYLKDIDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V + + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNGEVRGIVDTIVGQSIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KS+L S+SLPGKL+DCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSILESTSLPGKLSDCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F + +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFDIDKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL
Sbjct: 503 DGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIYKAKKETYVYSDPELDAALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT++PE R L Q+ +EDA EA+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMNPEQLWETTMDPEHRTLLQVTVEDAMEADEIFTILMGTKVEPRR 622
Query: 539 ELIQ-NAANLVNLD 551
+ I+ NA +VNLD
Sbjct: 623 DFIESNADKVVNLD 636
>gi|417003052|ref|ZP_11942138.1| DNA gyrase, B subunit [Anaerococcus prevotii ACS-065-V-Col13]
gi|325478798|gb|EGC81908.1| DNA gyrase, B subunit [Anaerococcus prevotii ACS-065-V-Col13]
Length = 633
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 271/558 (48%), Positives = 372/558 (66%), Gaps = 27/558 (4%)
Query: 2 IVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPV 61
++TVLHAGGKF Y SGGLHGVG+SVVNALSE L V RDG Y +SRG+
Sbjct: 94 VLTVLHAGGKF--DDKAYQFSGGLHGVGVSVVNALSEYLIAEVKRDGHIYKMSFSRGE-- 149
Query: 62 TTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRK 121
+T + + GT+I F PD ++F T I FD T+ R RE+AFLN + I
Sbjct: 150 --VTSELEVIGDTKETGTKITFKPDAEIFDTTI-FDRKTLENRFREMAFLNKGVEIIFED 206
Query: 122 EDSDPEKNQYNEYF-FAGGLEEYVQWLNTDKKPLHDVV----GFRKDVDGITIDLALQWC 176
+ D ++E F F GG+ E+V++LN +K P+ DV+ G ++D++ ++++ Q+
Sbjct: 207 QRED-----FSESFKFDGGISEFVKYLNRNKTPIMDVIPHFDGMQEDIE---VEVSFQY- 257
Query: 177 SDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREG 236
+D YS+ +L YAN+I T +GGTH+ G +++LTRT+N + K +K+ + +L GE +REG
Sbjct: 258 TDGYSENILTYANNIHTPEGGTHLSGFRSALTRTVNDYARNFKFIKENEDNLQGEDIREG 317
Query: 237 LTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSA 296
+T IISV++ P+FEGQTK +LGN EVR VD V + L +LE +P +I+ K+L++
Sbjct: 318 ITAIISVKISEPQFEGQTKAKLGNSEVRGAVDTFVSQRLQAFLEENPKPAKAIIEKALAS 377
Query: 297 LKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDR 356
+A AA++ARDL R++S+L S++LPGKLADC ST E+EIFIVEG+SAGGSAK GRD
Sbjct: 378 RRAREAARKARDLTRKRSILDSTTLPGKLADCQSTDLAENEIFIVEGNSAGGSAKGGRDN 437
Query: 357 RFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTD 416
R QAILPLRGKI+NVE+ + + +EEI+ +I A G G+ G++F LRY KIII+TD
Sbjct: 438 RIQAILPLRGKIMNVEKANLDRILNSEEIKAMITAFGTGI-GKEFDISKLRYGKIIIMTD 496
Query: 417 ADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSS 476
ADVDGAHIRTLLLTFFYRY K L DEG +YV PPLYK+ G+ +Y Y DAE KV
Sbjct: 497 ADVDGAHIRTLLLTFFYRYMKPLIDEGHVYVAQPPLYKISHGRNERYVYTDAERDKVLKE 556
Query: 477 FPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIED--AAEANVVFSSLMGARV 534
Y I R+KGLGEM QLW+TT++P+ R+L + V ED + + FS LMG +V
Sbjct: 557 LDVEN-YKINRYKGLGEMNADQLWDTTMDPDHRVLLR-VNEDFESTSTDDTFSLLMGEKV 614
Query: 535 DTRKELIQ-NAANLVNLD 551
+ R+ IQ NA + N+D
Sbjct: 615 EPRRNFIQENAKYVSNID 632
>gi|148378017|ref|YP_001252558.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 3502]
gi|153931278|ref|YP_001382416.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 19397]
gi|153936801|ref|YP_001385968.1| DNA gyrase subunit B [Clostridium botulinum A str. Hall]
gi|387816243|ref|YP_005676587.1| DNA gyrase subunit B [Clostridium botulinum H04402 065]
gi|148287501|emb|CAL81560.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 3502]
gi|152927322|gb|ABS32822.1| DNA gyrase, B subunit [Clostridium botulinum A str. ATCC 19397]
gi|152932715|gb|ABS38214.1| DNA gyrase, B subunit [Clostridium botulinum A str. Hall]
gi|322804284|emb|CBZ01834.1| DNA gyrase subunit B [Clostridium botulinum H04402 065]
Length = 637
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/554 (49%), Positives = 385/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE EV V R+G + QK+ RG
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEQCEVEVRREGHIWKQKFERGIT 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L V + GT+I F PD ++F ++F+++T+A R+RELAFLN + I+L
Sbjct: 154 KTGLDI----VGDTEDHGTKIYFKPDIEIFD-ELEFEYDTLAHRLRELAFLNKGIKISLT 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDV-VGFRKDVDGITIDLALQWCSDA 179
E D ++ + + GGL +V +LN +K+ LH + ++ DG +++A+Q+ +D
Sbjct: 209 DERYDKKEM----FHYEGGLRSFVLYLNRNKEKLHQQPIYVDENKDGCIVEIAMQY-NDG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
Y++ + +AN+I TI+GGTH+ G K++LTR +N +K +KD D +LSG+ VREGLT
Sbjct: 264 YAENIFSFANNIDTIEGGTHLAGFKSALTRVINDYARKFNYLKDTDKNLSGDDVREGLTA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+ISV++ +P+FEGQTKT+LGN EVR +VD V + + +LE +P+V I+ K LSA +A
Sbjct: 324 VISVKLTDPQFEGQTKTKLGNGEVRGIVDTIVGQSIGSFLEENPNVGKIIIEKGLSASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AAKRAR+L R+KS+L S+SLPGKL+DCSS P EI++VEGDSAGGSAKQGR+R FQ
Sbjct: 384 REAAKRARELTRRKSILESTSLPGKLSDCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPL+GKI+NVE++ + ++EI+ +I A G G+ G++F + +RY++III+TDADV
Sbjct: 444 AILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI-GKEFDIDKIRYNRIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY K L +EG +Y+ PPLY++ + K+ Y Y D EL
Sbjct: 503 DGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIYKAKKEIYVYSDPELDAALLELGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
+ +IQR+KGLGEM P QLWETT++PE R L Q+ +EDA EA+ +F+ LMG +V+ R+
Sbjct: 563 KDTNTNIQRYKGLGEMNPEQLWETTMDPEHRTLLQVTVEDAMEADEIFTILMGTKVEPRR 622
Query: 539 ELIQ-NAANLVNLD 551
+ I+ NA +VNLD
Sbjct: 623 DFIESNADKVVNLD 636
>gi|254555174|ref|YP_003061591.1| DNA gyrase, B subunit [Lactobacillus plantarum JDM1]
gi|300769110|ref|ZP_07078999.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179196|ref|YP_003923324.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380031107|ref|YP_004888098.1| DNA gyrase subunit B [Lactobacillus plantarum WCFS1]
gi|418273681|ref|ZP_12889263.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448819755|ref|YP_007412917.1| DNA gyrase subunit B [Lactobacillus plantarum ZJ316]
gi|254044101|gb|ACT60894.1| DNA gyrase, B subunit [Lactobacillus plantarum JDM1]
gi|300493350|gb|EFK28529.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308044687|gb|ADN97230.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342240350|emb|CCC77584.1| DNA gyrase, B subunit [Lactobacillus plantarum WCFS1]
gi|376010387|gb|EHS83712.1| DNA gyrase, B subunit [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448273252|gb|AGE37771.1| DNA gyrase subunit B [Lactobacillus plantarum ZJ316]
Length = 648
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/525 (48%), Positives = 351/525 (66%), Gaps = 7/525 (1%)
Query: 25 LHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVTTLTCHVLPVDSKDRQGTRIRFW 84
LHGVG SVVNALS +L+V V R+G Y+ + RGK T + ++ D GT + F
Sbjct: 125 LHGVGASVVNALSSTLDVKVTRNGHVYYMDFERGKVKTPMK--IIGDAPDDAHGTAVHFV 182
Query: 85 PDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKEDSDPEKNQYNEYFFAGGLEEYV 144
PD +F +D N + RIRELAFLN L I +R D+ P++ +++ + GG+ YV
Sbjct: 183 PDPDIFRETTTYDINILTTRIRELAFLNKGLRITIR--DNRPDEPTEDDFLYEGGIRHYV 240
Query: 145 QWLNTDKKPLH-DVVGFRKDVDGITIDLALQWCSDAYSDTMLGYANSIRTIDGGTHIEGV 203
++L+ +K L + + + +GIT+++ALQ+ D +S+ M + N+I T +GGTH EG
Sbjct: 241 EYLDKNKTVLFPEPIYVEGEQNGITVEVALQYTDDYHSNLMT-FTNNIHTYEGGTHEEGF 299
Query: 204 KASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCIISVRVPNPEFEGQTKTRLGNPEV 263
K +LTR +N +K+ +K+ D +LSGE VREG+T ++SV+ P+P+FEGQTKT+LGN +
Sbjct: 300 KRALTRVINDYARKNNLLKESDANLSGEDVREGMTAVVSVKHPDPQFEGQTKTKLGNSDA 359
Query: 264 RKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAALAAKRARDLVRQKSVLRSSSLPG 323
R VD+ E+ ++YL +P V ++ K L A KA +AAKRAR++ R+KS L S+LPG
Sbjct: 360 RAAVDRLFSEHFSKYLMENPSVARKVVDKGLLASKARVAAKRAREVTRKKSGLEISNLPG 419
Query: 324 KLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGKILNVERKDEAAMYKNE 383
KLAD SS PE SE+FIVEGDSAGGSAKQGR R QAILP+RGKILNVE+ + NE
Sbjct: 420 KLADNSSKDPEISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASIDKILANE 479
Query: 384 EIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEG 443
EI++L A+G G G DF YHK+II+TDADVDGAHIRTLLLT FYRY + L D G
Sbjct: 480 EIRSLFTAMGTGFGG-DFDLSKANYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLVDAG 538
Query: 444 CIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETT 503
+Y+ PPLY+V +GK V+Y D EL +V + +QR+KGLGEM QLWETT
Sbjct: 539 FVYIAQPPLYQVRQGKFVKYIDSDEELSEVMGQLAPSPKPVVQRYKGLGEMDAEQLWETT 598
Query: 504 LNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKELIQNAANLV 548
++P++R L ++ EDAA+A+ VFS LMG +V R+E I++ A V
Sbjct: 599 MDPDKRRLLRVRDEDAADADGVFSMLMGDQVKPRREFIEDNAKFV 643
>gi|289577274|ref|YP_003475901.1| DNA gyrase subunit beta [Thermoanaerobacter italicus Ab9]
gi|289526987|gb|ADD01339.1| DNA gyrase, B subunit [Thermoanaerobacter italicus Ab9]
Length = 633
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/552 (47%), Positives = 380/552 (68%), Gaps = 18/552 (3%)
Query: 3 VTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKPVT 62
+T+LHAGGKF ++ Y VSGGLHGVG+SVVNALSE LEV V + G + Q Y RG P T
Sbjct: 96 LTMLHAGGKF--NNDAYKVSGGLHGVGVSVVNALSEKLEVVVKQRGKIFRQTYERGVPKT 153
Query: 63 TLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALRKE 122
L + GT I F PDK++F + F+++ +A R+RELAFLN + I L E
Sbjct: 154 ELEIIG----ETEETGTTITFKPDKEIFEETV-FNYDVLAQRLRELAFLNKGINIRLIDE 208
Query: 123 DSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHD--VVGFRKDVDGITIDLALQWCSDAY 180
D ++ +N + GG+ +V++LN +K+ LH+ + K+ D +++ +Q+ +D Y
Sbjct: 209 -RDGKEEVFN---YEGGIISFVKYLNRNKEVLHEEPIYMEAKNTD-YEVEVCMQY-NDTY 262
Query: 181 SDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTCI 240
++ + +AN+I T +GGTH+ G K++LT+ +N +K +KD + +L GE VREGLT I
Sbjct: 263 TENIFSFANNIDTREGGTHLVGFKSALTKVINDYARKYGIIKDNEKNLQGEDVREGLTAI 322
Query: 241 ISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKAA 300
+SV++ NP+FEGQTKT+LGN E+R +V+ V E L+ +LE +P V I+ K+ A +A
Sbjct: 323 VSVKLKNPQFEGQTKTKLGNSEMRSIVENVVIEKLSAFLEENPSVAKVIVEKATQAARAR 382
Query: 301 LAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQA 360
AA++AR+L R+KS L +++LPGKLADCS P + E+F+VEGDSAGGSAK GR+ RFQA
Sbjct: 383 EAARKARELTRRKSALENTTLPGKLADCSEKDPSKCELFLVEGDSAGGSAKTGRNSRFQA 442
Query: 361 ILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADVD 420
ILPLRGKILNVE+ + NEEI+ +I ALG G+ G++F LRYHK++I+TDADVD
Sbjct: 443 ILPLRGKILNVEKARLDKILSNEEIRAMITALGTGI-GDEFDISKLRYHKVVIMTDADVD 501
Query: 421 GAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPSN 480
G+HIRTLLLTFFYR+ + L + G +Y+ PPLYK+ +GK+V Y Y D EL ++ +
Sbjct: 502 GSHIRTLLLTFFYRFMRPLIENGNVYIAQPPLYKITKGKKVYYAYSDKELDRILNEIGRE 561
Query: 481 ALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRKEL 540
Y++QR+KGLGEM QLW+TT++PE+R + ++ +EDA A+ +F+ LMG +V+ R+E
Sbjct: 562 N-YTVQRYKGLGEMNADQLWDTTMDPEKRTILKVTLEDAIAADEIFTILMGDKVEPRREF 620
Query: 541 IQNAANLV-NLD 551
I+ A V NLD
Sbjct: 621 IERYAKTVRNLD 632
>gi|153952676|ref|YP_001393441.1| DNA gyrase subunit B [Clostridium kluyveri DSM 555]
gi|219853349|ref|YP_002470471.1| DNA gyrase B subunit [Clostridium kluyveri NBRC 12016]
gi|146345557|gb|EDK32093.1| GyrB1 [Clostridium kluyveri DSM 555]
gi|219567073|dbj|BAH05057.1| DNA gyrase B subunit [Clostridium kluyveri NBRC 12016]
Length = 637
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 270/554 (48%), Positives = 384/554 (69%), Gaps = 16/554 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+I+T+LHAGGKFGG S LHGVG SVVNALSE EV V R+ + Q + RGK
Sbjct: 96 VIMTILHAGGKFGGGGYKVSGG--LHGVGASVVNALSEICEVEVKREKHVWKQVFKRGKV 153
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
T L + + GT+I F PDK++F + FD++ ++ R+RELAFLN + I L+
Sbjct: 154 ATGLEI----IGDSEEHGTKIYFKPDKEIFD-EVDFDYDMLSQRLRELAFLNKGIAITLK 208
Query: 121 KEDSDPEKNQYNEYFFAGGLEEYVQWLNTDKKPLHDVVGFRKDVDG-ITIDLALQWCSDA 179
E S E+ + + GG++ +V +LN +K+ +H + + + G ++++A Q+ ++
Sbjct: 209 DERSGKEE----LFHYEGGIKSFVTYLNRNKQTIHKEPIYVEGIKGDYSVEIAFQY-NNG 263
Query: 180 YSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGLTC 239
YS+ + +AN+I TI+GGTH+ G K++LTR N KK +K+ D +LSGE +REG+T
Sbjct: 264 YSENIFSFANNIDTIEGGTHLAGFKSALTRVFNDYAKKFNILKENDKNLSGEDIREGITA 323
Query: 240 IISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSALKA 299
+IS+++ +P+FEGQTKT+LGN EVR +VD + E L+++L+ +P V +I+ KSL A +A
Sbjct: 324 VISIKLVDPQFEGQTKTKLGNSEVRGIVDNIMAESLSDFLQENPQVAKTIIDKSLVASRA 383
Query: 300 ALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRRFQ 359
AA++AR+L R+K+VL ++SLPGKLADCSS P E EI++VEGDSAGGSAKQGRDRRFQ
Sbjct: 384 REAARKARELTRRKTVLENTSLPGKLADCSSKDPSECEIYLVEGDSAGGSAKQGRDRRFQ 443
Query: 360 AILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKKEALRYHKIIILTDADV 419
AILPLRGKI+NVE++ + EEI+ +I A G G+ G+DF +RY+KIII+TDADV
Sbjct: 444 AILPLRGKIMNVEKQRLDKILGYEEIRAMITAFGAGI-GKDFDISKIRYNKIIIMTDADV 502
Query: 420 DGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKVKSSFPS 479
DGAHIRTLLLTFFYRY + L ++ +Y+ PPLYKV + K+ Y Y D EL + +
Sbjct: 503 DGAHIRTLLLTFFYRYMRELVEKCHVYIAQPPLYKVAKNKKDYYAYSDKELDILLNEIGG 562
Query: 480 -NALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGARVDTRK 538
N+ +IQR+KGLGEM QLW+TT+NPE R L Q+ +ED A+ +F+ LMG +V+ RK
Sbjct: 563 KNSNVNIQRYKGLGEMDSEQLWDTTMNPETRTLIQVNVEDTIAADEIFTILMGDKVEPRK 622
Query: 539 E-LIQNAANLVNLD 551
+ +I+NA +VNLD
Sbjct: 623 DFIIENAKKVVNLD 636
>gi|85816900|gb|EAQ38085.1| DNA gyrase subunit B [Dokdonia donghaensis MED134]
Length = 647
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/558 (44%), Positives = 371/558 (66%), Gaps = 15/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALS L+ TV+++G + Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSNHLKATVYKEGKVWEQEYERGKA 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D GT + F PD +F +++++T+A R+RELA+LN +T+ L
Sbjct: 155 LYP----VKAIGDTDFTGTEVTFTPDDSIFQQTTEYNYDTLASRLRELAYLNKGITVTLT 210
Query: 121 KEDSDPEKNQY-NEYFFAG-GLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ + E ++ NE F + GL E+V++L+ ++ P+ +V+ + +G+ +++A+ + +
Sbjct: 211 DKRNKKEDGEFENETFHSNEGLSEFVRFLDGNRNPIIGNVISMEGEKNGVPVEVAMIY-N 269
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
D+Y++ + Y N+I T +GGTH+ G + LT +L S + ++G+ REGL
Sbjct: 270 DSYAENLHSYVNNINTHEGGTHLAGFRRGLTGSLKKFADASGMLDKLKFDIAGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T IISV+V P+FEGQTKT+LGN EV V Q+V E + Y+E +P+ +I+ K + A
Sbjct: 330 TAIISVKVSEPQFEGQTKTKLGNREVTSAVSQAVAEMIEIYMEENPNDAKTIVQKVILAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AAK+AR++V++K+V+ LPGKL+DCS T P E+F+VEGDSAGG+AKQGRDR
Sbjct: 390 QARHAAKKAREMVQRKTVMSIGGLPGKLSDCSETDPAVCEVFLVEGDSAGGTAKQGRDRE 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHK++I
Sbjct: 450 FQAILPLRGKILNVEKAMQHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYHKVVI 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+RY + L ++G +Y+ PPLY V++G++ QY +DD E +
Sbjct: 510 MCDADVDGSHISTLILTFFFRYMRELVEKGFVYIATPPLYLVKKGQKKQYAWDDKERDAI 569
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
+ + SIQR+KGLGEM QLW+TT+NPE R L+Q+ I++ EA+ +FS LMG
Sbjct: 570 AERLGTQGV-SIQRYKGLGEMNAEQLWDTTMNPEFRTLRQVAIDNGTEADRIFSMLMGDE 628
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 629 VPPRREFIEKNAIYANID 646
>gi|255530774|ref|YP_003091146.1| DNA gyrase subunit B [Pedobacter heparinus DSM 2366]
gi|255343758|gb|ACU03084.1| DNA gyrase, B subunit [Pedobacter heparinus DSM 2366]
Length = 652
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/566 (46%), Positives = 383/566 (67%), Gaps = 27/566 (4%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++TVLHAGGKF + Y VSGGLHGVG+S VNALS L+ V R+G + Q+Y+ GKP
Sbjct: 98 IVMTVLHAGGKFDKDT--YKVSGGLHGVGVSCVNALSTHLKAEVHREGKIWVQEYNIGKP 155
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V + D+ GT I F PD +FT ++ ++T+A R+REL+FLN + + L
Sbjct: 156 L----YEVKSIGDTDKLGTIITFTPDPTIFTQTTEYRYDTLASRLRELSFLNKGIKLTLT 211
Query: 121 KEDSDPEKNQY-NEYFFA-GGLEEYVQWLNTDK-----KPLHDVVGFRKDVDGITIDLAL 173
E E ++ +E F + GGL+E+VQ+L+ + +P++ V G + +GI ++LAL
Sbjct: 212 DERETLENGEFLSELFHSEGGLKEFVQFLDGTRPSLIPEPIY-VEGIK---NGIPVELAL 267
Query: 174 QWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHV 233
Q+ +D+YS+ + Y N+I T +GGTHI G + LTRTL + KS +K+ ++G+
Sbjct: 268 QY-NDSYSENVHSYVNNINTHEGGTHIAGFRRGLTRTLKAYADKSGLLKNVKFEITGDDF 326
Query: 234 REGLTCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKS 293
REGLT +ISV+V P+FEGQTKT+LGN EV VD +V E L YLE +P I++K
Sbjct: 327 REGLTAVISVKVQEPQFEGQTKTKLGNSEVMGAVDIAVGEALGIYLEEYPKEARMIVNKV 386
Query: 294 LSALKAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQG 353
+ A A AA++AR++V++KSV+ S LPGKLADCS + PE+ E+++VEGDSAGG+AKQG
Sbjct: 387 ILAATARAAARKAREMVQRKSVMGGSGLPGKLADCSDSDPEKCELYLVEGDSAGGTAKQG 446
Query: 354 RDRRFQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYH 409
RDR FQAILPL+GKILNVE+ E +Y+N+EI+N+ ALG+ + E+ K LRYH
Sbjct: 447 RDRNFQAILPLKGKILNVEKAMEHKIYENDEIKNMFTALGVSIGTEEDDKALNLAKLRYH 506
Query: 410 KIIILTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAE 469
KI+I+TDAD+DG+HI TL+LTFF+RY K L + G +Y+ PPLY+V++GK+ +YC++D +
Sbjct: 507 KIVIMTDADIDGSHITTLILTFFFRYMKALIEAGYVYIAAPPLYQVKKGKEFEYCWNDKQ 566
Query: 470 ----LKKVKSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVV 525
++++K + +++ IQR+KGLGEM QLW+TTLNP R L Q IE+AAE +
Sbjct: 567 RDDAVQRLKGAGKEESVH-IQRYKGLGEMNAEQLWDTTLNPATRTLMQATIENAAECDHT 625
Query: 526 FSSLMGARVDTRKELIQNAANLVNLD 551
FS LMG V R++ I+ A +D
Sbjct: 626 FSMLMGDEVAPRRDFIERNAKYAKID 651
>gi|386820195|ref|ZP_10107411.1| DNA gyrase, B subunit [Joostella marina DSM 19592]
gi|386425301|gb|EIJ39131.1| DNA gyrase, B subunit [Joostella marina DSM 19592]
Length = 646
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/558 (44%), Positives = 371/558 (66%), Gaps = 16/558 (2%)
Query: 1 MIVTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSESLEVTVWRDGMEYHQKYSRGKP 60
+++T + AGGKF S Y VSGGLHGVG+S VNALSESL+ TV+R+G + Q+Y RGK
Sbjct: 97 VVMTKIGAGGKFDKDS--YKVSGGLHGVGVSCVNALSESLKATVYRNGTIWEQEYERGKS 154
Query: 61 VTTLTCHVLPVDSKDRQGTRIRFWPDKQVFTTAIQFDHNTIAGRIRELAFLNPKLTIALR 120
+ V V D +GT + F PD +F +++ ++T+A R+RELAFLN +TI L
Sbjct: 155 LYP----VKSVGETDLRGTLVTFKPDPTIFQQTLEYSYDTLASRMRELAFLNKGITITLT 210
Query: 121 KEDSDPEKNQY--NEYFFAGGLEEYVQWLNTDKKPL-HDVVGFRKDVDGITIDLALQWCS 177
+ EK ++ ++ GL+E++++L+ +++ L DV+ + + I +++A+ + +
Sbjct: 211 DKRHKDEKGEFVFEKFHSEEGLKEFIKFLDGNRESLIKDVISMEGEKNDIPVEVAMVYNT 270
Query: 178 DAYSDTMLGYANSIRTIDGGTHIEGVKASLTRTLNSLGKKSKTVKDKDISLSGEHVREGL 237
++++ + Y N+I T +GGTH+ G + LT TL S + ++G+ REGL
Sbjct: 271 -SFTENLHSYVNNINTHEGGTHLSGFRRGLTTTLKKYADASGLLDKLKFEIAGDDFREGL 329
Query: 238 TCIISVRVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLSAL 297
T I+SV+V P+FEGQTKT+LGN EV V Q+V E L YLE +PD +I+ K + A
Sbjct: 330 TAIVSVKVAEPQFEGQTKTKLGNREVTSAVSQAVSEMLENYLEENPDDAKTIVQKVILAA 389
Query: 298 KAALAAKRARDLVRQKSVLRSSSLPGKLADCSSTTPEESEIFIVEGDSAGGSAKQGRDRR 357
+A AA++AR++V++K+V+ LPGKL+DCS PE+ E+F+VEGDSAGG+AKQGRDR
Sbjct: 390 QARHAARKAREMVQRKTVMSGGGLPGKLSDCSEQDPEKCEVFLVEGDSAGGTAKQGRDRN 449
Query: 358 FQAILPLRGKILNVERKDEAAMYKNEEIQNLIRALGLGVKGEDFKK----EALRYHKIII 413
FQAILPLRGKILNVE+ + +++NEEI+N+ ALG+ + E+ K LRYHK++I
Sbjct: 450 FQAILPLRGKILNVEKAMQHKVFENEEIRNIFTALGVTIGTEEDSKALNLSKLRYHKVVI 509
Query: 414 LTDADVDGAHIRTLLLTFFYRYQKTLFDEGCIYVGVPPLYKVERGKQVQYCYDDAELKKV 473
+ DADVDG+HI TL+LTFF+RY + L + G IY+ PPLY +++G + +Y ++D E ++
Sbjct: 510 MCDADVDGSHIATLILTFFFRYMRELVENGYIYIATPPLYLIKKGNKKEYAWNDKERDRL 569
Query: 474 KSSFPSNALYSIQRFKGLGEMMPVQLWETTLNPEQRMLKQLVIEDAAEANVVFSSLMGAR 533
F + ++QR+KGLGEM QLW+TT+NP+ R L+Q+ I+ +EA+ +FS LMG
Sbjct: 570 AEEFGGSV--NVQRYKGLGEMNAEQLWDTTMNPDFRTLRQVTIDSGSEADRIFSMLMGDE 627
Query: 534 VDTRKELIQNAANLVNLD 551
V R+E I+ A N+D
Sbjct: 628 VPPRREFIEKNAVYANID 645
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,487,250,304
Number of Sequences: 23463169
Number of extensions: 357344981
Number of successful extensions: 1085747
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17744
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 982945
Number of HSP's gapped (non-prelim): 21988
length of query: 555
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 407
effective length of database: 8,886,646,355
effective search space: 3616865066485
effective search space used: 3616865066485
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)