BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008741
(555 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225449917|ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
vinifera]
gi|296081305|emb|CBI17749.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/562 (64%), Positives = 424/562 (75%), Gaps = 19/562 (3%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MSDSKL +FGSFTE+ETRS L+ + S AEKPA KELQFGS++F T +L
Sbjct: 4 MSDSKLLLFGSFTEDETRSLLR----------LPSGNAEKPAAKKELQFGSVDFVTGRAL 53
Query: 61 VGTTDEPNGKS-VVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTN 119
+E ++ GP+ F S LLKKDD+ KSV N A G PKENG + + T+
Sbjct: 54 ASVGNELCRQADSSKGPIDFCSSNLLKKDDETKSVDGVNKLSSEAAGTPKENGGVHDFTH 113
Query: 120 GPALSNGV-NHLKADGIDFSSF--HQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNS 176
L NGV N L D + S QN H N + HV+ + RD N +S
Sbjct: 114 SSPLGNGVVNELNPDRFNLDSLCLSQNKE-HLNQFQSLESHVVEEECSKERDLNGTIDDS 172
Query: 177 S--ISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
S + KE+ +KA N P +VK+LLPRGLINSGNLCFLNATLQAL+SC+PF+QLLQELR
Sbjct: 173 STFVPLKKEI-LKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELR 231
Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
RDIPK GYPTLTAF FVS+FD P+ S KKK+++ ++ GRPFSP+MFE VLKNFTPDV
Sbjct: 232 IRDIPKVGYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDV 291
Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
PN ISGRPRQEDAQEFLSF+MDQMHDELLKL+G +++NG ++LVS AE+DEWETVGPK
Sbjct: 292 PNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVSSAEDDEWETVGPK 351
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
NKSAVTRTQSF+PS LS IFGGQL+SVVKA+GNKASATVQPFLLLHLDI EA++TIEDA
Sbjct: 352 NKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHLDILPEAIYTIEDA 411
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKS 473
LRLFSAPE LEGYRTS TG AG+VTA KSVKIQ LS+I+ILHLMRF Y +QGSTKLHK
Sbjct: 412 LRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFYYDENQGSTKLHKP 471
Query: 474 VRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 533
V FPL+LVLGR+LLV+P+ EGRKYELVAT+THHGRDPSKGHYT DAR+ + WL FDD++
Sbjct: 472 VTFPLELVLGRELLVSPTTEGRKYELVATITHHGRDPSKGHYTTDARHHSGHWLRFDDSA 531
Query: 534 VTAIGTSKVLHDQAYVLFYKQV 555
V + TSKVLH+ YVLFYKQV
Sbjct: 532 VNVVSTSKVLHEHPYVLFYKQV 553
>gi|255544103|ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
gi|223548125|gb|EEF49617.1| conserved hypothetical protein [Ricinus communis]
Length = 605
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/553 (62%), Positives = 401/553 (72%), Gaps = 39/553 (7%)
Query: 6 LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVGTTD 65
+ VFGSFTE+ET+SW ++SS + KKPV + KELQFGSLNF T + +
Sbjct: 89 VLVFGSFTEDETKSWQANKSSENDKKPV---------QKKELQFGSLNFATGITFGDFSS 139
Query: 66 EPNGK-SVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
E + + +G V FQ + KK+ VK + + + +G PK+NG I + T+ L+
Sbjct: 140 ESSRQPGSTNGKVSFQSTNPHKKEKDVK---IAINPEPSVLGSPKQNGSIADITHSVTLA 196
Query: 125 NGVNHLKADGIDFSSFH--QNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGSK 182
NGV LK + +D +S H QN N S S FHVL G + G D + NS +
Sbjct: 197 NGVKGLKTESLDLASLHLSQNEDSPINLSQSSNFHVLDSGAVKGGDLDGINNNSLVYVEN 256
Query: 183 EVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG 242
E K +EPV + AL+SCSPFVQLLQ LRTR+IPK G
Sbjct: 257 ENTRKPCDEPVAA-----------------------ALLSCSPFVQLLQNLRTRNIPKVG 293
Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP 302
+PTLTAF FVS+FD PS SS KK+ ++++ GRPFSP+MFE VLK FTPDVPN ISGRP
Sbjct: 294 FPTLTAFAQFVSEFDMPSS-SSLKKDTAIVETGRPFSPAMFEGVLKKFTPDVPNCISGRP 352
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
RQEDAQEFLSFIMDQMHDELLKL+G+ NGA ++LVS E+DEWETVGPKNKSAVTRT
Sbjct: 353 RQEDAQEFLSFIMDQMHDELLKLEGQFACTNGAKSSLVSSTEDDEWETVGPKNKSAVTRT 412
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
QSF+PS LSDIFGGQL+SVVKA GNKASATVQPFLLLHLDIY EAV TIEDAL LFSA E
Sbjct: 413 QSFIPSELSDIFGGQLRSVVKATGNKASATVQPFLLLHLDIYPEAVRTIEDALHLFSALE 472
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
NLEGYR TG AG+VTA+KSVKIQTLSKI+ILHLMRFSYGSQGSTKLHK V FPL+LVL
Sbjct: 473 NLEGYRAPVTGKAGIVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVHFPLELVL 532
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
GR+LLV+PS E RKYELVAT+THHGR+PSKGHYTADAR N WLHFDDASVTAIGTSKV
Sbjct: 533 GRELLVSPSTESRKYELVATITHHGREPSKGHYTADARCPNGHWLHFDDASVTAIGTSKV 592
Query: 543 LHDQAYVLFYKQV 555
LHDQAYVLFY+QV
Sbjct: 593 LHDQAYVLFYRQV 605
>gi|356542965|ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 530
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 407/561 (72%), Gaps = 42/561 (7%)
Query: 6 LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESS--LVGT 63
+FVFGSFTE+ETRS L QS G + EKP E +LQFGSLN T S L+ +
Sbjct: 1 MFVFGSFTEDETRSLLSKQSFG---------KKEKPVEKNQLQFGSLNSVTVESNNLLNS 51
Query: 64 TDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPAL 123
+ K+ + P PS K V ++ D+ G KENG I N +
Sbjct: 52 S-----KASYNAP----PS----DSRKCNGVKSAIDNSPEVSGTVKENGSITNISPRSTS 98
Query: 124 SNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRD-QNAAACNSSISGSK 182
+ VN ++ ++F + G P++KF L ++D + ++ +++ SG
Sbjct: 99 TISVNEVEEKNVNFFTLRCEDG------PLNKFTKL---SLDASEAESLKNVHTTGSGDD 149
Query: 183 EVPMKAINEPVKS--------VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
P EP K+ VKD+LPRGLINSGNLCFLNAT+QAL+SCSPFV LLQ+LR
Sbjct: 150 SAPKLPDREPQKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLR 209
Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
T ++PK GYPTLTAF F++ FD PS KK++ + GRPF P MFE VLKNFTPDV
Sbjct: 210 TCNLPKVGYPTLTAFAEFITQFDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDV 269
Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
PNSISGRPRQEDAQEFLSF+MDQMHDELLKL+G+S+S+NG+ ++LVS E+DEWETVGPK
Sbjct: 270 PNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSSLVSSVEDDEWETVGPK 329
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
NKSAVTRTQSFLPS LS IFGGQL+S+V+A+GN+ASATVQP+LLLHLDIY +AVHTIEDA
Sbjct: 330 NKSAVTRTQSFLPSELSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDA 389
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 474
L LFSAPE LEGYRTS T AGVVTA+KSV+I TL KI+ILHLMRF YGSQGSTKLHK V
Sbjct: 390 LHLFSAPETLEGYRTSLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKPV 449
Query: 475 RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
FPL+LVLGRDLLV+PS EGRKYELVAT+THHG +PSKGHYTADA+Y N +WL FDD SV
Sbjct: 450 HFPLELVLGRDLLVSPSTEGRKYELVATITHHGMEPSKGHYTADAQYPNGRWLRFDDQSV 509
Query: 535 TAIGTSKVLHDQAYVLFYKQV 555
AIGT+KVLHDQAYVLFY+Q+
Sbjct: 510 FAIGTNKVLHDQAYVLFYRQI 530
>gi|356531617|ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 532
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 407/561 (72%), Gaps = 40/561 (7%)
Query: 6 LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESS--LVGT 63
+F+FGSFTE+ET+S L QSSG + EKP E +LQFGSLN T S L+ +
Sbjct: 1 MFLFGSFTEDETQSLLSKQSSG---------KKEKPVEKNQLQFGSLNSVTVESNNLLNS 51
Query: 64 TDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPAL 123
+ P+ D +K + VKSV +D+ G KENG I N +
Sbjct: 52 SKSPDNSPPSDS----------QKCNGVKSV---SDNSPEVSGTIKENGSITNISPRSIT 98
Query: 124 SNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSI-SGSK 182
++ ++ + + + +SF G PS +KF L ++D + + I +G
Sbjct: 99 TSTISVNEVEEKNANSF--TLRGEDGPS--NKFTKL---SLDASEAESLKNLHKIGNGDD 151
Query: 183 EVPMKAINEPVKS--------VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
P + EP K+ VKD+LPRGLINSGNLCFLNAT+QAL+SCSPFV LLQ+LR
Sbjct: 152 SAPKLSDREPQKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLR 211
Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
TR++PK GYPTLTAF F++ FD PS KK++ + GRPF P MFE VLKNFTPDV
Sbjct: 212 TRNLPKVGYPTLTAFAEFIAQFDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDV 271
Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
PNSISGRPRQEDAQEFLSF+MDQMHDELLKL+G S+S+NG+ ++LVS E+DEWETVGPK
Sbjct: 272 PNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGHSSSLNGSKSSLVSSVEDDEWETVGPK 331
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
NKSAVTRTQSFLPS LS IFGGQL+S+V+A+GN+ASATVQP+LLLHLDIY +AVHTIEDA
Sbjct: 332 NKSAVTRTQSFLPSDLSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDA 391
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 474
L LFSAPE LEGYRTS T AGVVTA+KSV+I TL KI+ILHLMRF YGSQGS KLHK V
Sbjct: 392 LHLFSAPETLEGYRTSLTAKAGVVTARKSVRIVTLPKIMILHLMRFGYGSQGSIKLHKPV 451
Query: 475 RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
FPL+LVLGR+LLV+PS EGRKYELVAT+THHG +PSKGHYTADA+Y N +WL FDD SV
Sbjct: 452 HFPLELVLGRELLVSPSTEGRKYELVATITHHGTEPSKGHYTADAQYPNGRWLRFDDQSV 511
Query: 535 TAIGTSKVLHDQAYVLFYKQV 555
AIGT+KVLHDQAYVLFY+Q+
Sbjct: 512 FAIGTNKVLHDQAYVLFYRQM 532
>gi|357450917|ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 532
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 332/556 (59%), Positives = 393/556 (70%), Gaps = 25/556 (4%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ K+ +FGSFTE+ETRS VKK SS + EKP E +LQFGSLN S
Sbjct: 1 MSNPKVLLFGSFTEDETRSL-------RVKK--SSAKNEKPVEKNQLQFGSLN----SVT 47
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNG 120
V +++ PN + S L K K V + KENG I N + G
Sbjct: 48 VESSNLPNSPKATN-------SAPLHDSQKFKGVNGVRVNLPQVTETIKENGGITNFSIG 100
Query: 121 PALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISG 180
P+ N +K + I S G AN ++ +N + +SS
Sbjct: 101 PSSITSANEVK-EHIVCSVTPIVENGTANQFTNLSLDASEAESLKNVLKNGSGGDSSSKL 159
Query: 181 SKEVPMKAIN-EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP 239
++ KA N V VKDL PRGLINSGNLCFL+AT+QAL++CSPFVQLLQELRTR IP
Sbjct: 160 FEQNLKKAPNGHAVMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTIP 219
Query: 240 KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS 299
K GYPTL AF FV+ FD PSG + KKK+ + GR F P MFE VLKNFTPDVPNSIS
Sbjct: 220 KVGYPTLKAFAEFVTQFDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSIS 279
Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
GRPRQEDAQEFLSF+MDQMHDELLKL+G+S+S+NG+ + LVS E+DEWETVGPKNKSAV
Sbjct: 280 GRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSFLVSSVEDDEWETVGPKNKSAV 339
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
TRTQSF+PS L+ IFGGQL+S+V +GN+ SAT QP+ L+HLDI+ +AVHTIEDAL LFS
Sbjct: 340 TRTQSFIPSELNGIFGGQLQSLVITKGNR-SATNQPYRLIHLDIHPDAVHTIEDALHLFS 398
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
APE LEGYR S +G AG TAKKS+KI+TL K++ILHLMRF YGSQGSTKL K V FPL+
Sbjct: 399 APETLEGYRASVSGKAG--TAKKSIKIKTLPKVMILHLMRFGYGSQGSTKLLKPVHFPLE 456
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
LVLGRDLLV+PS EGRKYELVAT+THHGR+PSKGHYTADA+Y N +WL FDDASV AI T
Sbjct: 457 LVLGRDLLVSPSTEGRKYELVATITHHGREPSKGHYTADAQYPNGRWLRFDDASVFAIAT 516
Query: 540 SKVLHDQAYVLFYKQV 555
+KVLHDQAYVLFYKQ+
Sbjct: 517 NKVLHDQAYVLFYKQI 532
>gi|449507688|ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
sativus]
Length = 542
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 324/565 (57%), Positives = 395/565 (69%), Gaps = 33/565 (5%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MSDSK+ +FGSFTE+ET SW+ + + S + V+ + +QFGSLNF SL
Sbjct: 1 MSDSKVLLFGSFTEDETNSWMPPKLNVSPGRLVN---------NVNVQFGSLNFTDGKSL 51
Query: 61 VGTTDE----PNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKN 116
+ D P+G S G + F + L + D +++ V S H PKENG N
Sbjct: 52 GSSADSELKGPSGSST--GSITFGSTDLARDDTELEIVQRSESHSPLESEVPKENGSNYN 109
Query: 117 STNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLC------DGNIDGRDQN 170
S + SNGV+ K D ID SS + G H N +++F L +G+ID +N
Sbjct: 110 SNKSFSCSNGVSTTKIDDIDASSLCVSNGHHNNS--LNQFSRLIAEDIKENGSIDHLPEN 167
Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLL 230
KE +A N V S LLPRGLINSGNLCFLN+TLQAL+SC PFV LL
Sbjct: 168 VL---------KENFRRASNVSVTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLL 218
Query: 231 QELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNF 290
+ L+ R+IPK GY TLTAFV F+S + PS + ++++ D+G+PFSP MF+ VLKNF
Sbjct: 219 RNLQNREIPKVGYSTLTAFVEFISALEVPSS-TVLNRDVAASDVGKPFSPLMFDGVLKNF 277
Query: 291 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWET 350
+PD+P+ I GRPRQEDAQEFLSF+MD+MH ELLKL G+S+S NG + +V+ AE+DEWET
Sbjct: 278 SPDLPSGILGRPRQEDAQEFLSFVMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWET 337
Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
VG KN++AV RTQSF+PS LS+IFGGQL S+VKA+GNK SAT+QPFL LHLDI +AV T
Sbjct: 338 VGRKNRTAVMRTQSFVPSELSEIFGGQLTSMVKAKGNKPSATLQPFLSLHLDICPDAVRT 397
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
IEDALRLFSAPE LEGYR SS G AGVV A KSVKIQ SKI+ILHL RF YGS GSTKL
Sbjct: 398 IEDALRLFSAPETLEGYRPSSAGKAGVVAASKSVKIQKQSKIMILHLKRFGYGSHGSTKL 457
Query: 471 HKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 530
+K V FPL+LVL RDLLV+ S EGRKYELVAT+THHGR+ SKGHYTAD RY N+QWL FD
Sbjct: 458 NKPVHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFD 517
Query: 531 DASVTAIGTSKVLHDQAYVLFYKQV 555
DASVTAIG + VLHD+AYVLFYKQV
Sbjct: 518 DASVTAIGKNNVLHDRAYVLFYKQV 542
>gi|297798878|ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
gi|297313159|gb|EFH43582.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 327/568 (57%), Positives = 394/568 (69%), Gaps = 31/568 (5%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ KLFVFGSFTE ETRS+L+ +KP + K +QFGSLN E+S
Sbjct: 1 MSEKKLFVFGSFTEHETRSFLE-------QKPTKDPQNHKDKCVGSIQFGSLNLVAENSS 53
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
V T E K DG V S + S +D+D + P+ ENG
Sbjct: 54 VNTNGELK-KGQADGTVKSAGSQERLDASRPDSSNKIDDNDAKLPRKSSSRVPEHVVENG 112
Query: 113 HIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRDQ 169
IK + +L+NGV +K D I + G ++P + SKF L D D
Sbjct: 113 IIKEISESKSLNNGV-AVKTDPIGLDKLCM-SDGESDPVYKASSSKFQAL-----DNEDF 165
Query: 170 NAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL 229
++ + + SI K K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQL
Sbjct: 166 SSDSSSGSIQRKKN--QKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQL 223
Query: 230 LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKN 289
LQ ++ +DIPKA PTL AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+N
Sbjct: 224 LQRIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRN 282
Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--EEDE 347
FTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S A ++DE
Sbjct: 283 FTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDDDE 342
Query: 348 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
WETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 WETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDG 402
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGS
Sbjct: 403 VKGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGS 462
Query: 468 TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWL 527
TKLHK V+FPL+L L R+ LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL
Sbjct: 463 TKLHKGVKFPLELNLNRNHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWL 522
Query: 528 HFDDASVTAIGTSKVLHDQAYVLFYKQV 555
FDD SVTAIGT +VLHDQAYVLFYKQV
Sbjct: 523 RFDDPSVTAIGTKQVLHDQAYVLFYKQV 550
>gi|18417689|ref|NP_567860.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|42573095|ref|NP_974644.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|334187041|ref|NP_001190875.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|75262799|sp|Q9FPS3.1|UBP24_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 24; AltName:
Full=Deubiquitinating enzyme 24; Short=AtUBP24; AltName:
Full=Ubiquitin thioesterase 24; AltName:
Full=Ubiquitin-specific-processing protease 24
gi|11993488|gb|AAG42762.1|AF302672_1 ubiquitin-specific protease 24 [Arabidopsis thaliana]
gi|332660424|gb|AEE85824.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|332660425|gb|AEE85825.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|332660426|gb|AEE85826.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
Length = 551
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/569 (57%), Positives = 394/569 (69%), Gaps = 32/569 (5%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ K+FVFGSFTE ETRS+ + +KP + K +QFGSLN E+S
Sbjct: 1 MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQNSKDKCVGSIQFGSLNLAAENSS 53
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
V T E K DG V S + S +ND D ++ P+ +NG
Sbjct: 54 VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112
Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
IK S + +L+NGV +K D I + + G ++P + SKF L D D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165
Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
++ + + SI K +K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LLQ+++ +DIPKA PTL AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-- 346
NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D
Sbjct: 283 NFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGD 342
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 EWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPD 402
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQG
Sbjct: 403 GVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQG 462
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQW 526
STKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QW
Sbjct: 463 STKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQW 522
Query: 527 LHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
L FDDASVT IGT VLHDQAYVLFYKQV
Sbjct: 523 LRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>gi|222423693|dbj|BAH19813.1| AT4G30890 [Arabidopsis thaliana]
Length = 551
Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/569 (57%), Positives = 394/569 (69%), Gaps = 32/569 (5%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ K+FVFGSFTE ETRS+ + +KP + K +QFGSLN E+S
Sbjct: 1 MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQDSKDKCVGSIQFGSLNLAAENSS 53
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
V T E K DG V S + S +ND D ++ P+ +NG
Sbjct: 54 VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112
Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
IK S + +L+NGV +K D I + + G ++P + SKF L D D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165
Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
++ + + SI K +K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LLQ+++ +DIPKA PTL AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-- 346
NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D
Sbjct: 283 NFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGD 342
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 EWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPD 402
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQG
Sbjct: 403 GVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQG 462
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQW 526
STKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QW
Sbjct: 463 STKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQW 522
Query: 527 LHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
L FDDASVT IGT VLHDQAYVLFYKQV
Sbjct: 523 LRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>gi|449451721|ref|XP_004143610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
sativus]
Length = 522
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/519 (58%), Positives = 368/519 (70%), Gaps = 24/519 (4%)
Query: 47 LQFGSLNFGTESSLVGTTDE----PNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL 102
+QFGSLNF SL + D P+G S G + F + L + D +++ V S H
Sbjct: 18 VQFGSLNFTDGKSLGSSADSELKGPSGSST--GSITFGSTDLARDDTELEIVQRSESHSP 75
Query: 103 GAVGCPKENGHIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLC-- 160
PKENG NS + SNGV+ K D ID SS + G H N +++F L
Sbjct: 76 LESEVPKENGSNYNSNKSFSCSNGVSTTKIDDIDASSLCVSNGHHNNS--LNQFSRLIAE 133
Query: 161 ----DGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNAT 216
+G+ID +N KE +A N V S LLPRGLINSGNLCFLN+T
Sbjct: 134 DIKENGSIDHLPENVL---------KENFRRASNVSVTSSTTLLPRGLINSGNLCFLNST 184
Query: 217 LQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR 276
LQAL+SC PFV LL+ L+ R+IPK GY TLTAFV F+S + PS + ++++ D+G+
Sbjct: 185 LQALLSCPPFVDLLRNLQNREIPKVGYSTLTAFVEFISALEVPSS-TVLNRDVAASDVGK 243
Query: 277 PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGAN 336
PF P MF+ VLKNF+PD+P+ I GRPRQEDAQEFLSF+MD+MH ELLKL G+S+S NG
Sbjct: 244 PFIPLMFDGVLKNFSPDLPSGILGRPRQEDAQEFLSFVMDRMHAELLKLDGKSSSTNGGK 303
Query: 337 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
+ +V+ AE+DEWETVG KN++AV RTQSF+PS LS+IFGGQL S+VKA+GNK SAT+QPF
Sbjct: 304 SFVVASAEDDEWETVGRKNRTAVMRTQSFVPSELSEIFGGQLTSMVKAKGNKPSATLQPF 363
Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
L LHLDI +AV TIEDALRLFSAPE LEGYR SS G AGVV A KSVKIQ SKI+ILH
Sbjct: 364 LSLHLDICPDAVRTIEDALRLFSAPETLEGYRPSSAGKAGVVAASKSVKIQKQSKIMILH 423
Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYT 516
L RF YGS GSTKL+K V FPL+LVL RDLLV+ S EGRKYELVAT+THHGR+ SKGHYT
Sbjct: 424 LKRFGYGSHGSTKLNKPVHFPLELVLNRDLLVSSSTEGRKYELVATITHHGRESSKGHYT 483
Query: 517 ADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
AD RY N+QWL FDDASVTAIG + VLHD+AYVLFYKQV
Sbjct: 484 ADVRYHNNQWLRFDDASVTAIGKNNVLHDRAYVLFYKQV 522
>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
gi|238006636|gb|ACR34353.1| unknown [Zea mays]
gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 552
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 286/576 (49%), Positives = 363/576 (63%), Gaps = 54/576 (9%)
Query: 5 KLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFG-------TE 57
K+ +FGSFTE+ET+ Q Q S K VS K E E+QFG+LNF +
Sbjct: 6 KMLLFGSFTEDETK-LFQGQPLKSPNKSVS-----KECERTEIQFGTLNFSVLSLEKVST 59
Query: 58 SSLVGTTDEPNGKSVVDGPVVFQPSTLLKKD---DKVKSVGAS--NDHDLGAVGCPKENG 112
SS+V N ++ S + K++ ++ K+ G+S N + A GCP N
Sbjct: 60 SSVVLPAKSANSET----------SAITKENTCSNEKKAAGSSLPNGRAILANGCPPVNV 109
Query: 113 HIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGN-------ID 165
N L V +A +NP+P V DG +D
Sbjct: 110 PANND-----LFENVKKTEAV----VPPVVPVKSISNPTPQMTLEVHNDGTEPTQSRKLD 160
Query: 166 GRDQNAAACNSSISGSKEVP------MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQA 219
+++ S I + + +N+ L+P+GL N+GN+CFLNATLQA
Sbjct: 161 -KEREITENGSPIVDTPIAAAPAEEAVTNLNKKTSQNMPLIPQGLRNTGNICFLNATLQA 219
Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
L+SCSPFV LLQ+LR R IPK GYPTL AFV +S FD +KKK + +P +
Sbjct: 220 LLSCSPFVHLLQDLRNRSIPKFGYPTLRAFVELISQFDVLDESVNKKKEKATTVAAKPLN 279
Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTAL 339
P+MF+ VL+NFTPDVP I+ RPRQEDAQEFLSF MD++HDELLKL G ++ +
Sbjct: 280 PAMFDDVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRVHDELLKLNG--NGLDSKEGMV 337
Query: 340 VSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
VS + +D WETVG KNKSA+ RT SF+PS LS IFGGQL+SVVKA GNKASATVQPFLLL
Sbjct: 338 VSSSADDAWETVGRKNKSAIVRTHSFVPSELSAIFGGQLQSVVKAAGNKASATVQPFLLL 397
Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
HLDI+ +AV T+ DALRLFS PE+LEGYRT++ G AG+VTA+KS KI L KI+ILHL R
Sbjct: 398 HLDIFPDAVQTLNDALRLFSTPESLEGYRTTA-GKAGLVTARKSFKIHALPKIMILHLKR 456
Query: 460 FSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA 519
FSYG+ GSTK++K + F +LVL RDLL +PS EGRKYELVAT+THHGRDP +GHYTA A
Sbjct: 457 FSYGNNGSTKIYKPLGFTSELVLSRDLLSSPSQEGRKYELVATITHHGRDPYRGHYTAHA 516
Query: 520 RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
++ + QWL FDD +V +G + VLHDQAYVLFYKQV
Sbjct: 517 KHADGQWLRFDDDAVVPVGENDVLHDQAYVLFYKQV 552
>gi|34395185|dbj|BAC83574.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 669
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 292/582 (50%), Positives = 375/582 (64%), Gaps = 63/582 (10%)
Query: 3 DSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVG 62
D ++ +FGSFTE ET+ W A K E E+QFGSLNF S +
Sbjct: 122 DDQILLFGSFTEAETKLW--------------QPNANKTRELSEIQFGSLNF----SALN 163
Query: 63 TTDEPNGKSVVDGPVVFQPSTLLKKDDKV---KSVGASNDHDLGAVGCPKE-----NGH- 113
+ E N S+ G V P+ L +K+ K + SN + A P NG
Sbjct: 164 LSKESN--SITQGAVY--PAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP 219
Query: 114 IKNSTNGPALSNGV--NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNA 171
N+ P +NGV N+ KA +S A ++P+P+S V DG I+ R+QN+
Sbjct: 220 TANANVSP--NNGVIENNQKAVAAVLTSVP--AKNVSSPAPLSVPEVDHDG-IE-RNQNS 273
Query: 172 AACNSSISG---SKEVPMKA--INEPVKSV-------KDLLPRGLINSGNLCFLNATLQA 219
+ + + P A ++E V S+ K LLP GL N+GN+CFLN++LQA
Sbjct: 274 SLVPEITENGGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQA 333
Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
L+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S FD + KK +
Sbjct: 334 LLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVI 393
Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT-- 337
PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD+MHDEL+KL G NG+N+
Sbjct: 394 PSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNG-----NGSNSKE 448
Query: 338 -ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
+VS ++D WETVG KNKSA+ R+QSF+PS L+ IFGGQL+S VKA GNKAS TVQPF
Sbjct: 449 GMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPF 508
Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G AG+VTA+KSVKI +LSKI+ILH
Sbjct: 509 RLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-GKAGLVTARKSVKIHSLSKIMILH 567
Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GRKYELVATVTHHGRDPSKG 513
L RFSYGS G TKL K + FPL+LVL RDLL +PS+E R+YELVAT+TH G +PS+G
Sbjct: 568 LKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYELVATITHLGANPSRG 627
Query: 514 HYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
HYTADA+ + QWL FDD +VT + +KVLHDQAYVLFYKQ+
Sbjct: 628 HYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFYKQL 669
>gi|224072837|ref|XP_002303905.1| predicted protein [Populus trichocarpa]
gi|222841337|gb|EEE78884.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/284 (82%), Positives = 255/284 (89%)
Query: 272 LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTS 331
++ GRPF P+MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM QMHDELLKL+G+S+
Sbjct: 12 VETGRPFRPAMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMHQMHDELLKLEGQSSG 71
Query: 332 INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA 391
NG T++VS EEDEWETVGPKNKSAVTRTQSF+PS LSDIFGGQL+SVVKA+GNKASA
Sbjct: 72 TNGFKTSVVSSTEEDEWETVGPKNKSAVTRTQSFIPSELSDIFGGQLRSVVKARGNKASA 131
Query: 392 TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSK 451
TVQPFLLLHLDI+ E V TIEDAL LFSAPENLEGYRTS+ G +GVVTAKKSVKIQTLSK
Sbjct: 132 TVQPFLLLHLDIHLEVVRTIEDALHLFSAPENLEGYRTSAIGKSGVVTAKKSVKIQTLSK 191
Query: 452 ILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPS 511
I+ILHLMRFSYGSQGS KL K V FPL+ +L R+LLV+PS E RKYELVATVTHHGR+PS
Sbjct: 192 IMILHLMRFSYGSQGSAKLLKPVHFPLEFILSRELLVSPSTESRKYELVATVTHHGREPS 251
Query: 512 KGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
KGHYTAD R+ N QWL FDDASVTAI TSKVLHDQAYVLFYKQV
Sbjct: 252 KGHYTADVRHSNGQWLRFDDASVTAITTSKVLHDQAYVLFYKQV 295
>gi|326520702|dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 739
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/359 (64%), Positives = 281/359 (78%), Gaps = 3/359 (0%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
K LLP GL N+GN+CFLNATLQA +SC PFVQL+Q+L+ R+IPKAGYPTL+AF+ VS F
Sbjct: 384 KPLLPHGLKNTGNICFLNATLQAFLSCFPFVQLVQDLKNRNIPKAGYPTLSAFIELVSQF 443
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
D + KK L + +P+MF+ VL+NFTPDVP S RPRQEDAQEFLSF MD
Sbjct: 444 DVLDESTMKKDERFALVAAKVINPTMFDQVLRNFTPDVPAGTSARPRQEDAQEFLSFAMD 503
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+MHDELL+L G +N +VS ++D WETVG KNKSA+ RTQSF+PS LS IFGG
Sbjct: 504 RMHDELLRLNG--NGLNSKEGMVVSSDDDDAWETVGRKNKSAIMRTQSFVPSDLSAIFGG 561
Query: 377 QLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
+L+SVVKA GNKASATVQPFLLLHLDI+ +AV T++DAL LFS PE+LEGYRT++ G AG
Sbjct: 562 KLQSVVKAAGNKASATVQPFLLLHLDIFPDAVQTLDDALHLFSTPESLEGYRTTA-GKAG 620
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
VVTA+KS KI LSKI+ILHL RFSYG++G TKL+K + FPL+LVL RDLL +PS+EGR+
Sbjct: 621 VVTARKSFKIHELSKIMILHLKRFSYGNRGCTKLYKPLHFPLELVLNRDLLSSPSSEGRR 680
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
YELVAT+THHG P++GHYTADA+ QWL FDD V I +KVLH+ AY+LFYKQV
Sbjct: 681 YELVATITHHGSGPARGHYTADAKRDGGQWLRFDDGHVMPIHVNKVLHNPAYILFYKQV 739
>gi|115473875|ref|NP_001060536.1| Os07g0661300 [Oryza sativa Japonica Group]
gi|113612072|dbj|BAF22450.1| Os07g0661300, partial [Oryza sativa Japonica Group]
Length = 489
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 283/365 (77%), Gaps = 12/365 (3%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
K LLP GL N+GN+CFLN++LQAL+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S F
Sbjct: 131 KPLLPHGLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQF 190
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
D + KK + PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD
Sbjct: 191 DVLDDSNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMD 250
Query: 317 QMHDELLKLQGESTSINGANT---ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
+MHDEL+KL G NG+N+ +VS ++D WETVG KNKSA+ R+QSF+PS L+ I
Sbjct: 251 RMHDELVKLNG-----NGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAI 305
Query: 374 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
FGGQL+S VKA GNKAS TVQPF L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G
Sbjct: 306 FGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-G 364
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
AG+VTA+KSVKI +LSKI+ILHL RFSYGS G TKL K + FPL+LVL RDLL +PS+E
Sbjct: 365 KAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSE 424
Query: 494 ---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
R+YELVAT+TH G +PS+GHYTADA+ + QWL FDD +VT + +KVLHDQAYVL
Sbjct: 425 HMQSRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVL 484
Query: 551 FYKQV 555
FYKQ+
Sbjct: 485 FYKQL 489
>gi|218200195|gb|EEC82622.1| hypothetical protein OsI_27205 [Oryza sativa Indica Group]
Length = 737
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 278/564 (49%), Positives = 359/564 (63%), Gaps = 63/564 (11%)
Query: 3 DSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVG 62
D ++ +FGSFTE ET+ W A K E E+QFGSLNF S +
Sbjct: 122 DDQILLFGSFTEAETKLW--------------QPNANKTRELSEIQFGSLNF----SALN 163
Query: 63 TTDEPNGKSVVDGPVVFQPSTLLKKDDKV---KSVGASNDHDLGAVGCPKE-----NGH- 113
+ E N S+ G V P+ L +K+ K + SN + A P NG
Sbjct: 164 LSKESN--SITQGAVY--PAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP 219
Query: 114 IKNSTNGPALSNGV--NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNA 171
N+ P +NGV N+ KA +S A ++P+P+S V DG I+ R+QN+
Sbjct: 220 TANANVSP--NNGVIENNQKAVAAVLTSVP--AKNVSSPAPLSVPEVDHDG-IE-RNQNS 273
Query: 172 AACNSSISG---SKEVPMKA--INEPVKSV-------KDLLPRGLINSGNLCFLNATLQA 219
+ + + P A ++E V S+ K LLP GL N+GN+CFLN++LQA
Sbjct: 274 SLVPEITENGGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQA 333
Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
L+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S FD + KK +
Sbjct: 334 LLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVI 393
Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT-- 337
PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD+MHDEL+KL G NG+N+
Sbjct: 394 PSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNG-----NGSNSKE 448
Query: 338 -ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
+VS ++D WETVG KNKSA+ R+QSF+PS L+ IFGGQL+S VKA GNKAS TVQPF
Sbjct: 449 GMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPF 508
Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G AG+VTA+KSVKI +LSKI+ILH
Sbjct: 509 RLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-GKAGLVTARKSVKIHSLSKIMILH 567
Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GRKYELVATVTHHGRDPSKG 513
L RFSYGS G TKL K + FPL+LVL RDLL +PS+E R+YELVAT+TH G +PS+G
Sbjct: 568 LKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYELVATITHLGANPSRG 627
Query: 514 HYTADARYFNDQWLHFDDASVTAI 537
HYTADA+ + QWL FDD +VT +
Sbjct: 628 HYTADAKSASGQWLRFDDDNVTPL 651
>gi|222637619|gb|EEE67751.1| hypothetical protein OsJ_25454 [Oryza sativa Japonica Group]
Length = 738
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 278/564 (49%), Positives = 361/564 (64%), Gaps = 63/564 (11%)
Query: 3 DSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVG 62
+ ++ +FGSFTE ET+ W +P A K E E+QFGSLNF S +
Sbjct: 123 NDRILLFGSFTEAETKLW----------QP----NANKTRELSEIQFGSLNF----SALN 164
Query: 63 TTDEPNGKSVVDGPVVFQPSTLLKKDDKV---KSVGASNDHDLGAVGCPKE-----NGH- 113
+ E N S+ G V P+ L +K+ K + SN + A P NG
Sbjct: 165 LSKESN--SITQGAVY--PAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP 220
Query: 114 IKNSTNGPALSNGV--NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNA 171
N+ P +NGV N+ KA +S A ++P+P+S V DG I+ R+QN+
Sbjct: 221 TANANVSP--NNGVIENNQKAVAAVLTSVP--AKNVSSPAPLSVPEVDHDG-IE-RNQNS 274
Query: 172 AACNSSISG---SKEVPMKA--INEPVKSV-------KDLLPRGLINSGNLCFLNATLQA 219
+ + + P A ++E V S+ K LLP GL N+GN+CFLN++LQA
Sbjct: 275 SLVPEITENGGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQA 334
Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
L+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S FD + KK +
Sbjct: 335 LLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVI 394
Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT-- 337
PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD+MHDEL+KL G NG+N+
Sbjct: 395 PSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNG-----NGSNSKE 449
Query: 338 -ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
+VS ++D WETVG KNKSA+ R+QSF+PS L+ IFGGQL+S VKA GNKAS TVQPF
Sbjct: 450 GMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPF 509
Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G AG+VTA+KSVKI +LSKI+ILH
Sbjct: 510 RLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-GKAGLVTARKSVKIHSLSKIMILH 568
Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GRKYELVATVTHHGRDPSKG 513
L RFSYGS G TKL K + FPL+LVL RDLL +PS+E R+YELVAT+TH G +PS+G
Sbjct: 569 LKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQSRRYELVATITHLGANPSRG 628
Query: 514 HYTADARYFNDQWLHFDDASVTAI 537
HYTADA+ + QWL FDD +VT +
Sbjct: 629 HYTADAKSASGQWLRFDDDNVTPL 652
>gi|147817822|emb|CAN75583.1| hypothetical protein VITISV_036537 [Vitis vinifera]
Length = 275
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/275 (78%), Positives = 243/275 (88%), Gaps = 1/275 (0%)
Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
MFE VLKNFTPDVPN ISGRPRQEDAQEFLSF+MDQMHDELLKL+G +++NG ++LVS
Sbjct: 1 MFEGVLKNFTPDVPNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVS 60
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
AE+DEWETVGPKNKSAVTRTQSF+PS LS IFGGQL+SVVKA+GNKASATVQPFLLLHL
Sbjct: 61 SAEDDEWETVGPKNKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHL 120
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI EA++TIEDALRLFSAPE LEGYRTS TG AG+VTA KSVKIQ LS+I+ILHLMRF
Sbjct: 121 DILPEAIYTIEDALRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFY 180
Query: 462 YG-SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR 520
Y +QGSTKLHK V FPL+LVLGR+LLV+P+ EGRKYELVAT+THHGRDPSKGHYT DAR
Sbjct: 181 YDENQGSTKLHKPVTFPLELVLGRELLVSPTTEGRKYELVATITHHGRDPSKGHYTTDAR 240
Query: 521 YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
+ + WL FDD++V + TSKVLH+ YVLFYKQV
Sbjct: 241 HHSGHWLRFDDSAVNVVSTSKVLHEHPYVLFYKQV 275
>gi|22022542|gb|AAM83229.1| AT4g30890/F6I18_200 [Arabidopsis thaliana]
gi|23308335|gb|AAN18137.1| At4g30890/F6I18_200 [Arabidopsis thaliana]
Length = 276
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/276 (73%), Positives = 231/276 (83%), Gaps = 2/276 (0%)
Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
MFE VL+NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S
Sbjct: 1 MFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVIS 60
Query: 342 LAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
A +D EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLL
Sbjct: 61 SANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLL 120
Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
HLDI+ + V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMR
Sbjct: 121 HLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMR 180
Query: 460 FSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA 519
FSYGSQGSTKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYT DA
Sbjct: 181 FSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDA 240
Query: 520 RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
R N QWL FDDASVT IGT VLHDQAYVLFYKQV
Sbjct: 241 RRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 276
>gi|2980777|emb|CAA18204.1| putative protein [Arabidopsis thaliana]
gi|7269990|emb|CAB79807.1| putative protein [Arabidopsis thaliana]
Length = 463
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/466 (50%), Positives = 294/466 (63%), Gaps = 51/466 (10%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ K+FVFGSFTE ETRS+ + +KP + K +QFGSLN E+S
Sbjct: 1 MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQNSKDKCVGSIQFGSLNLAAENSS 53
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
V T E K DG V S + S +ND D ++ P+ +NG
Sbjct: 54 VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112
Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
IK S + +L+NGV +K D I + + G ++P + SKF L D D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165
Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
++ + + SI K +K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LLQ+++ +DIPKA PTL AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282
Query: 289 NFTPDVPNSISGRPR-------------------QEDAQEFLSFIMDQMHDELLKLQGES 329
NFTPDV N++SGRPR EDAQEFLSFIMDQMHDELLKL+ +S
Sbjct: 283 NFTPDVLNNMSGRPRLVTPLHSLNFDGSSVLNSSYEDAQEFLSFIMDQMHDELLKLKEQS 342
Query: 330 TSINGANTALVSLAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN 387
+ + ++++S A +D EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G
Sbjct: 343 PKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGT 402
Query: 388 KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KASATVQP+LLLHLDI+ + V IEDAL LFSA E+LEGYR S TG
Sbjct: 403 KASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTG 448
>gi|413968370|gb|AFW90523.1| ubiquitin carboxyl-terminal hydrolase 24-like protein [Phaseolus
vulgaris]
Length = 530
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/210 (80%), Positives = 188/210 (89%)
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWETVGPKNKSAVTRTQS PS LS IFGGQL+S+VKA+GNK SATVQP+LLLHLDIY
Sbjct: 321 DEWETVGPKNKSAVTRTQSLAPSELSCIFGGQLQSMVKAKGNKPSATVQPYLLLHLDIYP 380
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 465
+ VHTIEDALRLFSA E LEGYR S T AGVVTA+KSV+I TL KI+ILHLMRF YGSQ
Sbjct: 381 DTVHTIEDALRLFSASEALEGYRASLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQ 440
Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
GSTKLHK+V FPL+LVLGRDLLV+PS EGRKYELVAT+THHGR+PSKGHYTADA+Y N +
Sbjct: 441 GSTKLHKAVHFPLELVLGRDLLVSPSTEGRKYELVATITHHGREPSKGHYTADAQYPNGR 500
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
WL FDDASV AIGT+KVLHDQAYVLFY+Q+
Sbjct: 501 WLRFDDASVFAIGTNKVLHDQAYVLFYRQL 530
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 28/152 (18%)
Query: 6 LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGT-ESSLVGTT 64
+ +FGSFTE+ETRS L QSSG+ EK AE +LQFGSLN T ES+ + +
Sbjct: 1 MLLFGSFTEDETRSLLSKQSSGN---------NEKSAEKNQLQFGSLNSVTVESNNLQNS 51
Query: 65 DEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
+ + ++ G +K + VK+V +D+ G KENG I N + P
Sbjct: 52 SKASASALPSGS---------QKCNGVKNV---SDNSSEVSGTIKENGSITNFSPNPMGI 99
Query: 125 NGVNHLKADGIDFSSFHQNAGGHANPSPISKF 156
GVN ++ +++ + G P SKF
Sbjct: 100 AGVNEVEKKNVNWFTLLDEDG------PSSKF 125
>gi|168036283|ref|XP_001770637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678158|gb|EDQ64620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/277 (59%), Positives = 216/277 (77%), Gaps = 11/277 (3%)
Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
MF+ VL++F+PD P GRPRQEDAQEFLS +MD++H+ELL L+G S I G N +
Sbjct: 1 MFDDVLRSFSPDQPPR--GRPRQEDAQEFLSHVMDRLHEELLWLEGRS--IVGQN----A 52
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
+ +++EWE VGPKNKSA+TRT + S LSDIFGGQL SVVKA+GNKASATVQPFL+LHL
Sbjct: 53 VVDDEEWEIVGPKNKSALTRTHMTIKSPLSDIFGGQLCSVVKAKGNKASATVQPFLVLHL 112
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI S+AV +IEDALR F+APE+LEGY+ +S+ + VV+A K++KIQ+L +LI+HLMRFS
Sbjct: 113 DILSDAVQSIEDALRFFAAPESLEGYKAASSKASEVVSASKAIKIQSLPSVLIVHLMRFS 172
Query: 462 YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTAD 518
YG+ GS KL+K++++ L +GR+LL T + EGRKYELVATVTHHG +PS GHYTAD
Sbjct: 173 YGASGSGKLNKAIKYSNSLTIGRELLATSTGSATEGRKYELVATVTHHGNNPSTGHYTAD 232
Query: 519 ARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
R + +WL FDDA V+ + ++VL + YVLFYK+V
Sbjct: 233 CRQPDGRWLRFDDAVVSVVPINQVLQEHTYVLFYKRV 269
>gi|414887984|tpg|DAA63998.1| TPA: hypothetical protein ZEAMMB73_048281, partial [Zea mays]
Length = 368
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 208/389 (53%), Gaps = 50/389 (12%)
Query: 5 KLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVGTT 64
K+ +FGSFTE+ET+ LQ Q S K VS K E E+QFG+LN
Sbjct: 7 KMLLFGSFTEDETK-LLQGQPLKSPTKSVS-----KECERTEIQFGTLNLSVL------- 53
Query: 65 DEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
N + + VV + + + A N+ A G NG GP L+
Sbjct: 54 ---NLEKISTSSVVLPAKSAKGETSAITKENACNNEK-KAAGSSLSNG-------GPVLA 102
Query: 125 NG---VNHLKADGIDFSSFHQNA--------GGHANPSPISKFHVLCDGN--IDGRDQNA 171
NG VN +G+ F + A +NP+P DG + R N
Sbjct: 103 NGCPPVNVPANNGL-FENVKTEAVVPPVIPVKIISNPTPQMTLETHKDGTKPTESRKLNK 161
Query: 172 A---ACNSS-------ISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALM 221
N S ++ E + ++N+ LLP GL N+GN+CFLNATLQAL+
Sbjct: 162 EREITENGSPIVDKHIVAAPAEEAVTSLNKKASQNMPLLPHGLRNTGNICFLNATLQALL 221
Query: 222 SCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPS 281
SCSPFV LLQ+LR R IPK GYPTL+AFV +S D P KK + +P +P+
Sbjct: 222 SCSPFVYLLQDLRNRRIPKVGYPTLSAFVELISQLDVPDESVIKKNEKVITVAAKPLNPA 281
Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
MF+AVL+NFTPDVP I+ RPRQEDAQEFLSF MD+MHDELLKL G+ +N +VS
Sbjct: 282 MFDAVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRMHDELLKLNGD--GLNSKEGMVVS 339
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
A++D WETVG KNKSA+ RTQSF+PS L
Sbjct: 340 SADDDAWETVGRKNKSAIVRTQSFVPSEL 368
>gi|148225368|ref|NP_001080643.1| ubiquitin carboxyl-terminal hydrolase 10-B [Xenopus laevis]
gi|82176651|sp|Q7ZXR7.1|UB10B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10-B; AltName:
Full=Deubiquitinating enzyme 10-B; AltName:
Full=Ubiquitin thioesterase 10-B; AltName:
Full=Ubiquitin-specific-processing protease 10-B
gi|28277342|gb|AAH44285.1| Usp10-prov protein [Xenopus laevis]
Length = 805
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 223/405 (55%), Gaps = 47/405 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P +K+ K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKVIKDIRPGAPFEPTYIYRLLTVFK----SS 521
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 344
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQE 581
Query: 345 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 402
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
I SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698
Query: 463 -GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHY 515
+ G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GHY
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEVSKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHY 757
Query: 516 TADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
T D + WL DD SV I +V+ AY+L+Y++V
Sbjct: 758 TTDVFQIGLNGWLRIDDQSVKVINQYQVVKQTVERTAYLLYYRRV 802
>gi|326669691|ref|XP_685621.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 1
[Danio rerio]
Length = 865
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 225/406 (55%), Gaps = 48/406 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 469 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLFSETQRPCTS 524
Query: 243 YPTLTAFVGFVSDFD---TPSGGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
P + F+ V++F PS + +K + L +G PF P+ +L + +
Sbjct: 525 TPMMDNFIRLVNEFSNMPVPSKAKQQAAGEKILKDLRVGAPFEPTYVYKLLTL----IKS 580
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANT--------ALVS 341
S+S + RQEDA+E+L FI++ +H+E+L L + ++ + NG + A
Sbjct: 581 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLISPQEEKAPTPNGPESQPGVEEDPAEKE 640
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
+DEWE VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 641 EGSDDEWEQVGPRNKTSITRQADFIRTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 700
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI SE + T+++AL + A E+++GY T S + + V ++ L +L+LHL RF
Sbjct: 701 DIQSEKIRTVQEALEVLVARESVQGYTTKSKQE---IEISRRVTLEELPPVLVLHLKRFV 757
Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 514
+ + G KL K++ +P+ L + +DLL +P G R Y L A V HHG + GH
Sbjct: 758 FEKTGGCQKLIKTIDYPVDLEISKDLL-SPGVRGKTMKGQRTYRLFAVVYHHGNSATGGH 816
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
YT D + + WL DD +V I +V+ AY+L+Y++V
Sbjct: 817 YTTDVFHIGLNGWLRIDDQAVKIINQHQVVKQTAERTAYLLYYRRV 862
>gi|147902172|ref|NP_001090293.1| ubiquitin carboxyl-terminal hydrolase 10-A [Xenopus laevis]
gi|123895418|sp|Q2NL57.1|UB10A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10-A; AltName:
Full=Deubiquitinating enzyme 10-A; AltName:
Full=Ubiquitin thioesterase 10-A; AltName:
Full=Ubiquitin-specific-processing protease 10-A
gi|84708827|gb|AAI10954.1| MGC132196 protein [Xenopus laevis]
Length = 791
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 222/406 (54%), Gaps = 49/406 (12%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 396 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQKPCTS 451
Query: 243 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + +FV +++F P + + + V DI G PF P+ +L F +
Sbjct: 452 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK----S 506
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 507 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGPDPVFATEEVNKEEQ 566
Query: 345 ---EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 567 EGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQL 626
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF
Sbjct: 627 DIQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFV 683
Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 514
+ + G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GH
Sbjct: 684 FEKTGGCQKLIKNIEYPVDLEISKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGH 742
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 743 YTTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 788
>gi|55742513|ref|NP_001006761.1| ubiquitin carboxyl-terminal hydrolase 10 [Xenopus (Silurana)
tropicalis]
gi|82183396|sp|Q6DIJ4.1|UBP10_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|49522494|gb|AAH75544.1| ubiquitin specific peptidase 10 [Xenopus (Silurana) tropicalis]
gi|89273888|emb|CAJ83514.1| ubiquitin specific protease 10 [Xenopus (Silurana) tropicalis]
Length = 805
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 223/405 (55%), Gaps = 47/405 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 243 YPTLTAFVGFVSDF-DTP----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P + +S +K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKVIRDIRPGAPFEPAYIYRLLTVFK----SS 521
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 344
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEINKDEQE 581
Query: 345 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 402
++EWE VGP++KS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRHKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
I SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698
Query: 463 -GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHY 515
+ G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GHY
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEISKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHY 757
Query: 516 TADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
T D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 TTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 802
>gi|260805678|ref|XP_002597713.1| hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae]
gi|229282980|gb|EEN53725.1| hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae]
Length = 402
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 215/391 (54%), Gaps = 41/391 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
L PRGL+N GN C++NATLQA+++C P L++ + P PT T + + +F +
Sbjct: 16 LQPRGLVNKGNWCYINATLQAMVACPPMYNLMKNMPLPSSPNKRGPTATPILDCLMEFTS 75
Query: 259 PSGGS-------SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
G + KK L G PF P+ +L + +++S + RQEDA+EFL
Sbjct: 76 EFGSMPNSQKTIAGKKPAQDLRPGSPFEPTYVYHMLSL----IKSTLSSKGRQEDAEEFL 131
Query: 312 SFIMDQMHDELL-KLQGESTSI-----------NGANTALVSLAEE---DEWETVGPKNK 356
S +++ +H+E+ K+ GE T +GA + EE DEWE VGPKNK
Sbjct: 132 SCVLNGIHEEMQPKMNGELTPKSDGPSSPTPREDGAVEGFMMEQEEGDEDEWEQVGPKNK 191
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
S VTRT +F+ + +SDIFGGQL+S+ G + SAT+QPF L LDI SE + T++DAL
Sbjct: 192 STVTRTANFVRTPVSDIFGGQLRSIFHQHGTRESATLQPFFTLQLDIQSEKIWTVKDALE 251
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVR 475
E + GY S T V A + + I+ L +L+LHL RF Y + GS K+ K V
Sbjct: 252 AMVTKETIHGYTCSKTKQE--VEASRRMMIEELPPVLVLHLKRFVYDKTGGSQKVQKRVD 309
Query: 476 FPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 528
F ++L + ++LL +P+ + R Y L A V HHG++ + GHYT D + + WL
Sbjct: 310 FNIELDINKELL-SPAVKNKLHQGQRTYRLFAVVYHHGKNATGGHYTTDVFHVGINGWLR 368
Query: 529 FDDASVTAIGTSKVLH----DQAYVLFYKQV 555
FDD +V + + +V+ Y+L+Y++
Sbjct: 369 FDDQNVKVVTSQQVMKYTPPRVPYLLYYRRC 399
>gi|375152198|gb|AFA36557.1| putative ubiquitin-specific protease, partial [Lolium perenne]
Length = 168
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 138/172 (80%), Gaps = 5/172 (2%)
Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
P S RPRQEDAQEFLSF MD+MHDELLKL G N +VS +++D WETVG K
Sbjct: 1 PAGTSARPRQEDAQEFLSFAMDRMHDELLKLNGS----NSKEGMVVSASDDDAWETVGRK 56
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
NKSA+ RTQS +PS LS IFGG+L+S+VKA GNK SAT+QPFLLLHLDI+ +AVHT+EDA
Sbjct: 57 NKSAIMRTQSLVPSELSAIFGGELQSMVKAAGNKPSATIQPFLLLHLDIFPDAVHTVEDA 116
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
L LFS PE+LEGYRT++ G AGVVTA+KS +I TLSKI+ILHL RFSYG+ G
Sbjct: 117 LHLFSTPESLEGYRTAA-GKAGVVTARKSFQIHTLSKIMILHLKRFSYGNHG 167
>gi|387019601|gb|AFJ51918.1| Ubiquitin carboxyl-terminal hydrolase 10 [Crotalus adamanteus]
Length = 783
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 225/404 (55%), Gaps = 47/404 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL----RTRDIPKA 241
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + +T+ P
Sbjct: 390 VKLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMFSKTQR-PCT 444
Query: 242 GYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + +FV +++F K+ +S DI G F P+ +L + +
Sbjct: 445 STPMIDSFVRLMNEFTNMPVPPKAKQALSDKIARDIRPGAAFEPTYIYRLLTV----IKS 500
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQG----ESTSINGANTALVSLAEE------- 345
S+S + RQEDA+E+L FI++ +H+E+L L+ S NG T LV+ +E
Sbjct: 501 SLSEKGRQEDAEEYLGFILNGLHEEMLILKKLLSPHSEISNGPETQLVNEEDEQEEQGEG 560
Query: 346 --DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDI 403
DEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LDI
Sbjct: 561 SEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQLDI 620
Query: 404 YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY- 462
S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y
Sbjct: 621 QSDRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFVYE 677
Query: 463 GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYT 516
+ G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT
Sbjct: 678 KTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHYT 736
Query: 517 ADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 737 TDVFQIGLNGWLRIDDQAVKVITQHQVVKPSAERTAYLLYYRRV 780
>gi|449282514|gb|EMC89347.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Columba livia]
Length = 787
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 222/406 (54%), Gaps = 48/406 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
++ I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 391 VRLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 446
Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P +K+ K + + G F P+ +L + +S
Sbjct: 447 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 502
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
+S + RQEDA+E+L FI++ +H+E+L L+ E ++ NG V
Sbjct: 503 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLAVSNGPEAQTVHEEEEQDEQG 562
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 563 EGSEDEWEQVGPRNKSSVTRQADFIQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 622
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 623 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 679
Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 514
Y + G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GH
Sbjct: 680 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGH 738
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 739 YTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERSAYLLYYRRV 784
>gi|47230410|emb|CAF99603.1| unnamed protein product [Tetraodon nigroviridis]
Length = 832
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 221/406 (54%), Gaps = 47/406 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---LRTRDIPKAG 242
+K I++PV L PRGL+N GN C++NATLQAL++C P L++ L P
Sbjct: 435 VKLIHKPVS----LQPRGLVNKGNWCYINATLQALVACPPMYHLMKSIPLLNETQRPCTS 490
Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + FV V++F + P +K++ + V DI G PF P+ +L + +
Sbjct: 491 TPMIDNFVRLVNEFSNMPVPSKAKQQGVGDKVVKDIRPGVPFEPTYIYKLLTL----IKS 546
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
S+S + RQEDA+E+L F ++ +H+E+L L Q E + + E
Sbjct: 547 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLVLPQEEKAPPPNGPESQPGMEEDAADKD 606
Query: 345 ----EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLH 400
EDEWE VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L
Sbjct: 607 EEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQ 666
Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
LDI SE + T+++AL A E+++GY ++ N + + V ++ L +L+LHL RF
Sbjct: 667 LDIQSEKIRTVQEALETMVARESVQGY---TSKNKQEIEISRRVTLEELPPVLVLHLKRF 723
Query: 461 SY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-----RKYELVATVTHHGRDPSKGH 514
+ + G KL K++ +P+ L + +DLL + R Y L A V HHG + GH
Sbjct: 724 VFEKTGGCQKLSKNIDYPVDLEISKDLLSSGVRSKVLKGQRTYRLFAVVYHHGNSATGGH 783
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKVLHDQ----AYVLFYKQV 555
YT D + + WL DD +V I ++L AY+L+Y++V
Sbjct: 784 YTTDVFHIGLNGWLRIDDQAVKVINQYQLLKQSVERTAYLLYYRRV 829
>gi|57524928|ref|NP_001006130.1| ubiquitin carboxyl-terminal hydrolase 10 [Gallus gallus]
gi|75571288|sp|Q5ZJN4.1|UBP10_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|53133460|emb|CAG32059.1| hypothetical protein RCJMB04_16o18 [Gallus gallus]
Length = 785
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 218/406 (53%), Gaps = 48/406 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 389 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 444
Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 445 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 500
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 501 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 560
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 561 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 620
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 621 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 677
Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 514
Y + G KL K++ +P+ L + ++LL +P + R Y L A V HHG + H
Sbjct: 678 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGDH 736
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 737 YTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 782
>gi|77628029|ref|NP_001029318.1| ubiquitin carboxyl-terminal hydrolase 10 [Rattus norvegicus]
gi|123780598|sp|Q3KR59.1|UBP10_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|76779344|gb|AAI05893.1| Ubiquitin specific peptidase 10 [Rattus norvegicus]
Length = 794
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 43/392 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 255
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 408 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 467
Query: 256 FD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 468 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 523
Query: 311 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 355
L FI++ +H+E+L L+ E S+ NG + L+ E EDEWE VGPKN
Sbjct: 524 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 583
Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 584 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 643
Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 474
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 644 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 700
Query: 475 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 701 EYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 759
Query: 528 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 555
DD +V I +V+ AY+L+Y++V
Sbjct: 760 RIDDQTVKVINQYQVVRPSADRTAYLLYYRRV 791
>gi|149038330|gb|EDL92690.1| ubiquitin specific protease 10 [Rattus norvegicus]
Length = 795
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 43/392 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 255
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 409 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 468
Query: 256 FD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 469 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 524
Query: 311 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 355
L FI++ +H+E+L L+ E S+ NG + L+ E EDEWE VGPKN
Sbjct: 525 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 584
Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 585 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 644
Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 474
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 645 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 701
Query: 475 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 702 EYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 760
Query: 528 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 555
DD +V I +V+ AY+L+Y++V
Sbjct: 761 RIDDQTVKVINQYQVVRPSADRTAYLLYYRRV 792
>gi|410913199|ref|XP_003970076.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Takifugu
rubripes]
Length = 871
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 222/406 (54%), Gaps = 47/406 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---LRTRDIPKAG 242
+K I++PV L PRGL+N GN C++NATLQAL++C P L++ L P
Sbjct: 474 VKLIHKPVS----LQPRGLVNKGNWCYINATLQALIACPPMYHLMKSIPMLSETQRPCTS 529
Query: 243 YPTLTAFVGFVSDFDT-PSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + FV V++F+ P +K++ + + DI G PF P+ +L + +
Sbjct: 530 TPMMDNFVRLVNEFNNMPVPSKAKQQAVGDKVMKDIRPGVPFEPTYIYKLLTL----IKS 585
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
S+S + RQEDA+E+L F ++ +H+E+L L Q E + + E
Sbjct: 586 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESQSGVEEDAADKD 645
Query: 345 ----EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLH 400
EDEWE VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L
Sbjct: 646 EEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQ 705
Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
LDI SE + T+++AL A E+++GY TS T + + V ++ L +L+LHL RF
Sbjct: 706 LDIQSEKIRTVQEALETMVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLKRF 762
Query: 461 SY-GSQGSTKLHKSVRFPLQLVLGRDLLV----TPSAEG-RKYELVATVTHHGRDPSKGH 514
+ + G KL K++ +P+ L + +DLL + +G R Y L A V HHG + GH
Sbjct: 763 VFEKTGGCQKLSKNIDYPVDLEISKDLLSSGVRSKVVKGQRTYRLFAVVYHHGNSATGGH 822
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKVLHDQ----AYVLFYKQV 555
YT D + + WL DD +V I +L AY+L+Y++V
Sbjct: 823 YTTDVFHIGLNGWLRIDDQAVKVINQYHLLKQSAERTAYLLYYRRV 868
>gi|395508418|ref|XP_003758509.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Sarcophilus
harrisii]
Length = 1048
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 221/401 (55%), Gaps = 46/401 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 657 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 712
Query: 246 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 713 IDSFVRLMNEFTNMPIPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 768
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------ED 346
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG T V E ED
Sbjct: 769 KGRQEDAEEYLGFILNGLHEEMLNLKKLLLPNNEKFSVSNGPETHSVPEDEQEQGEGSED 828
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI SE
Sbjct: 829 EWEQVGPRNKTSVTRQADFIQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSE 888
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 465
+HT++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 889 KIHTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 945
Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA 519
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 946 GCQKLIKNIEYPVDLEISRELL-SPGVKNKNFKGHRNYRLFAVVYHHGNSATGGHYTTDV 1004
Query: 520 RYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 1005 FQIGLNGWLRIDDQAVKVITQYQVVKPSAERTAYLLYYRRV 1045
>gi|344238013|gb|EGV94116.1| Ubiquitin carboxyl-terminal hydrolase 10 [Cricetulus griseus]
Length = 772
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 380 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 435
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 436 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 491
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + L+ E E
Sbjct: 492 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKLTVSNGPRSHLIEDEEQEDTGEGSE 551
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 552 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 611
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 612 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 668
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 669 GGCQKLVKNIDYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 727
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 728 VFQIGLNGWLRIDDQTVKVINQYQVVKPTADRTAYLLYYRRV 769
>gi|354465458|ref|XP_003495197.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Cricetulus griseus]
Length = 792
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKLTVSNGPRSHLIEDEEQEDTGEGSE 571
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 572 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPTADRTAYLLYYRRV 789
>gi|149640242|ref|XP_001510486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like, partial
[Ornithorhynchus anatinus]
Length = 793
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 222/403 (55%), Gaps = 48/403 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRD-IPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L T++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFVPLYTKEQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F PS + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPSKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + + EE
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKFSVSNGPEAPIANEDEEQDDQGDGS 571
Query: 346 -DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
DEW+ VGP+NK+++TR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI
Sbjct: 572 EDEWKQVGPRNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQ 631
Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-G 463
S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y
Sbjct: 632 SDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEK 688
Query: 464 SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTA 517
+ G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT
Sbjct: 689 TGGCQKLIKNIDYPVDLEISKELL-SPGVKSKNFKGHRTYRLFAVVYHHGNSATGGHYTT 747
Query: 518 DARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 DVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 790
>gi|334312992|ref|XP_001375064.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Monodelphis domestica]
Length = 825
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 219/401 (54%), Gaps = 46/401 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 434 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVYSKVQRPCTSTPM 489
Query: 246 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 490 IDSFVRLMNEFTNMPIPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 545
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------ED 346
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + V E ED
Sbjct: 546 KGRQEDAEEYLGFILNGLHEEMLNLKKLLLPNNEKFSVSNGPDAQSVHEDEQGQGEGSED 605
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+
Sbjct: 606 EWEQVGPRNKTSVTRQADFIQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSD 665
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 465
+HT++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 666 KIHTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 722
Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA 519
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 723 GCQKLIKNIEYPVDLEISRELL-SPGVKNKNFKGHRNYRLFAVVYHHGNSATGGHYTTDV 781
Query: 520 RYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 782 FQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 822
>gi|326927485|ref|XP_003209923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Meleagris
gallopavo]
Length = 816
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 219/415 (52%), Gaps = 57/415 (13%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 411 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 466
Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 467 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 522
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 523 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVHEEEEQDEQG 582
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 583 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 642
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 643 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 699
Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVA---------TVTH 505
Y + G KL K++ +P+ L + ++LL +P + R Y L A V H
Sbjct: 700 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAAHHKFLFSQVVYH 758
Query: 506 HGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
HG + GHYT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 HGNSATGGHYTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 813
>gi|281339966|gb|EFB15550.1| hypothetical protein PANDA_001250 [Ailuropoda melanoleuca]
Length = 748
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 356 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 411
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 412 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 467
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 468 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNAKLSISNGPKSHSVNEDEQEEPGEGSE 527
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 528 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 587
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 588 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 644
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 645 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 703
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 704 VFQIGLNGWLRIDDQAVKVINQYQVVKPTAERTAYLLYYRRV 745
>gi|449472364|ref|XP_002194358.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Taeniopygia
guttata]
Length = 792
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 218/406 (53%), Gaps = 48/406 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
++ I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 396 VRLIHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 451
Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
P L +FV +++F P + V DI G F P+ +L + +S
Sbjct: 452 TPMLDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 507
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 508 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKVSVSNGPEAQSVPKEEEQEEQG 567
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+Q F L L
Sbjct: 568 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQLFFTLQL 627
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI S+ + T++DAL A E+++GY T + V + + ++ L +L+LHL RF
Sbjct: 628 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRLTLEKLPPVLVLHLKRFV 684
Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 514
Y + G KL K++ + + L + ++LL +P + R Y L A V HHG + GH
Sbjct: 685 YEKTGGCQKLIKNIEYTVDLEISKELL-SPGVKSKISKGQRTYRLFAVVYHHGNSATGGH 743
Query: 515 YTADARYFN-DQWLHFDDASVTAIGTSKV----LHDQAYVLFYKQV 555
YT D + WL DD +V I S+V L AY+L+Y+QV
Sbjct: 744 YTTDVFQIGLNGWLRIDDQAVRVIHHSQVVKAALERTAYLLYYRQV 789
>gi|74138423|dbj|BAE38053.1| unnamed protein product [Mus musculus]
Length = 792
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 221/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++++H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNRLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>gi|350584818|ref|XP_003126873.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Sus scrofa]
Length = 481
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 89 IHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVFSKVQRPCTSTPM 144
Query: 246 LTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F + P ++ K + + G F P+ +L + +S+S
Sbjct: 145 IDSFVRLMNEFTNMPVPPKPRQALGDKVMRDIRPGAAFEPTYIYRLLTV----IKSSLSE 200
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + LV E E
Sbjct: 201 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPDNEKLTVSNGPQSHLVDEDEQEEPGEGSE 260
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 261 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 320
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 321 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 377
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 378 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 436
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 437 VFQIGLNGWLRIDDQTVKVINQYQVVKPAAERTAYLLYYRRV 478
>gi|432104908|gb|ELK31420.1| Ubiquitin carboxyl-terminal hydrolase 10 [Myotis davidii]
Length = 777
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 385 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 440
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 441 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 496
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S SIN E
Sbjct: 497 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLPISNGPKSYSINEEEQEEPGEGSE 556
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 557 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 616
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 617 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 673
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 674 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 732
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLH----DQAYVLFYKQV 555
+ WL DD V I +V+ AY+L+Y++V
Sbjct: 733 VFQIGLNGWLRIDDQMVKVINQYQVVKPAADRTAYLLYYRRV 774
>gi|301755200|ref|XP_002913456.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Ailuropoda melanoleuca]
Length = 843
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 451 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 506
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 507 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 562
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 563 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNAKLSISNGPKSHSVNEDEQEEPGEGSE 622
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 623 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 682
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 683 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 739
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 740 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 798
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 799 VFQIGLNGWLRIDDQAVKVINQYQVVKPTAERTAYLLYYRRV 840
>gi|74148888|dbj|BAE32139.1| unnamed protein product [Mus musculus]
Length = 793
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 222/403 (55%), Gaps = 49/403 (12%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 456
Query: 246 LTAFVGFVSDFD----TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSIS 299
+ +FV +++F TP + I V DI G F P+ +L + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVTPKPRQALGDKI-VRDIRPGAAFEPTYIYRLLTV----IKSSLS 511
Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------- 344
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E
Sbjct: 512 EKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGS 571
Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
EDEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI
Sbjct: 572 EDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQ 631
Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-G 463
S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y
Sbjct: 632 SDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEK 688
Query: 464 SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTA 517
+ G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT
Sbjct: 689 TGGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTT 747
Query: 518 DARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 DVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 790
>gi|355727892|gb|AES09345.1| ubiquitin specific peptidase 10 [Mustela putorius furo]
Length = 788
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 396 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 451
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 452 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 507
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 508 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLPVSNGPKSHSVNEDEQEEPGEGSE 567
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 568 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 627
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 628 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 684
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 685 GGCQKLVKNIDYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 743
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 744 VFQIGLNGWLRIDDQAVKVISQYQVVKPTAERTAYLLYYRRV 785
>gi|13938036|gb|AAH07134.1| Ubiquitin specific peptidase 10 [Mus musculus]
Length = 792
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>gi|148679672|gb|EDL11619.1| ubiquitin specific peptidase 10, isoform CRA_a [Mus musculus]
Length = 822
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 430 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 485
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 486 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 541
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 542 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 601
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 602 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 661
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 662 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 718
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 719 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 777
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 778 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 819
>gi|292495057|sp|P52479.3|UBP10_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
Length = 792
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>gi|328868647|gb|EGG17025.1| ubiquitin hydrolase B [Dictyostelium fasciculatum]
Length = 1019
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 207/404 (51%), Gaps = 57/404 (14%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSD-FDTP 259
+G++N+ N CF+N LQ+L+ C PFV+LL+ + + P + YPTL F D F T
Sbjct: 621 KGMVNTSNTCFMNVILQSLIGCQPFVKLLKSISDSEGPSQTKYPTLHHLKQFHDDYFSTI 680
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS-----------ISGRPR----- 303
++ K +S +P +P F ++K+F + IS + R
Sbjct: 681 QVSNNTSKYVSS---PQPINPKYFGDIVKSFNSKIAPPSPSPIIPFSVPISNKKRTKLTI 737
Query: 304 ------------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----ED 346
Q+DAQEFL++ +D +H+E + L E + + E D
Sbjct: 738 YEAVQQQSLNSCQQDAQEFLTYFLDLIHEEFVSLLKEIEGPKEEKQMVQPILEPTTKDND 797
Query: 347 EWETVGPKNKSAVT--RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
WE VG KNK++ T + S +S IF G ++S V +K S T+QPF LHLD+
Sbjct: 798 GWEIVGAKNKTSTVNDHTTNLNGSPISQIFSGTMRSSVNRSESKESVTLQPFYCLHLDVR 857
Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
E+VHT+E+AL LF E LEGY S+ G VTA KS+ I+ L KILI+H RF+Y +
Sbjct: 858 PESVHTLEEALSLFMKEETLEGYTCSTKGVE--VTASKSMSIEVLPKILIVHFKRFAYDT 915
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTP--------------SAEGRKYELVATVTHHGRDP 510
+ KL K + FP L L P +A +KY L++ V+HHG+
Sbjct: 916 EAQ-KLDKFISFPTTLTLKSHNSHAPPPSQPQTFASTILAAASAKKYSLLSVVSHHGKGL 974
Query: 511 SKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
S+GHYT D N QW+ FDDA V+ I +VL+ +AY+L Y+Q
Sbjct: 975 SQGHYTCDVLQPNLQWMRFDDALVSEITEQEVLNREAYLLLYQQ 1018
>gi|6678493|ref|NP_033488.1| ubiquitin carboxyl-terminal hydrolase 10 [Mus musculus]
gi|1255636|dbj|BAA12220.1| ubiquitin carboxyl-terminal hydrolase (UBP) [Mus musculus]
gi|74192398|dbj|BAE43006.1| unnamed protein product [Mus musculus]
gi|148679673|gb|EDL11620.1| ubiquitin specific peptidase 10, isoform CRA_b [Mus musculus]
Length = 793
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 456
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 512
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 513 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 572
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 573 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 632
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 633 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 689
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 690 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 748
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 749 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 790
>gi|73957166|ref|XP_536761.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Canis lupus
familiaris]
Length = 834
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 442 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 497
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 498 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 553
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSL--------AEE 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ E
Sbjct: 554 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTISNGPKSHSVTEDDQEEPGEGSE 613
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 614 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 673
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 674 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 730
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 731 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 789
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 790 VFQIGLNGWLRIDDQAVKVINQYQVVKPTAERTAYLLYYRRV 831
>gi|37359830|dbj|BAC97893.1| mKIAA0190 protein [Mus musculus]
Length = 818
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 426 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 481
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 482 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 537
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 538 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 597
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 598 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 657
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 658 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 714
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 715 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 773
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 774 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 815
>gi|74192179|dbj|BAE34291.1| unnamed protein product [Mus musculus]
Length = 793
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI---PKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQGPCTSTPM 456
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 512
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 513 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 572
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 573 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 632
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 633 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 689
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 690 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 748
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 749 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 790
>gi|344292966|ref|XP_003418195.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Loxodonta
africana]
Length = 958
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 566 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVYSKAQRPCTSTPM 621
Query: 246 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 622 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 677
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + LV+ E
Sbjct: 678 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTVSNGPKSPLVNEEEREEQGEGSE 737
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 738 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQTSKESATLQPFFTLQLDIQS 797
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 798 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 854
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 855 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 913
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V + +V+ AY+L+Y++V
Sbjct: 914 VFQIGLNGWLRIDDQTVKVVTQYQVVRPTAERTAYLLYYRRV 955
>gi|338723097|ref|XP_001499923.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Equus
caballus]
Length = 813
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 421 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 476
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 477 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 532
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ E E
Sbjct: 533 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKSHSVNEDEQEEPDEGSE 592
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 593 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 652
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 653 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 709
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 710 GGCQKLVKNIEYPVDLEISKELL-SPGVKNKNLKCHRTYRLFAVVYHHGSSATGGHYTTD 768
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD V + +V+ AY+L+Y++V
Sbjct: 769 VFQIGLNGWLRIDDQMVKVVNQYQVVKPTADRTAYLLYYRRV 810
>gi|1136438|dbj|BAA11507.1| KIAA0190 [Homo sapiens]
Length = 813
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 421 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 476
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 477 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 532
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 533 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 592
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 593 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 652
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 653 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 709
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 710 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 768
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 769 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 810
>gi|31873306|emb|CAD97644.1| hypothetical protein [Homo sapiens]
Length = 824
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 432 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 487
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 488 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 543
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 544 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 603
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 604 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 663
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 664 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 720
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 721 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 779
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 780 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 821
>gi|11360280|pir||T47164 hypothetical protein DKFZp762E1712.1 - human (fragment)
Length = 825
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 433 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 488
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 489 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 544
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 545 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 604
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 605 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 664
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 665 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 721
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 722 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 780
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 781 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 822
>gi|332246808|ref|XP_003272544.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Nomascus
leucogenys]
Length = 821
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 429 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 484
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 485 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 540
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 541 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVNEEEQEEQGEGSE 600
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 601 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 660
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 661 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 717
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 718 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 776
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 777 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 818
>gi|395748166|ref|XP_003778720.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 2
[Pongo abelii]
Length = 798
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNPSVNEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|410300628|gb|JAA28914.1| ubiquitin specific peptidase 10 [Pan troglodytes]
Length = 803
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|297699363|ref|XP_002826757.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 1
[Pongo abelii]
Length = 802
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNPSVNEEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|119615877|gb|EAW95471.1| ubiquitin specific peptidase 10, isoform CRA_b [Homo sapiens]
Length = 897
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 505 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 560
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 561 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 616
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 617 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 676
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 677 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 736
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 737 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 793
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 794 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 852
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 853 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 894
>gi|12653005|gb|AAH00263.1| Ubiquitin specific peptidase 10 [Homo sapiens]
gi|61364925|gb|AAX42626.1| ubiquitin specific protease 10 [synthetic construct]
gi|123983753|gb|ABM83479.1| ubiquitin specific peptidase 10 [synthetic construct]
gi|123998177|gb|ABM86690.1| ubiquitin specific peptidase 10 [synthetic construct]
Length = 798
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|194389058|dbj|BAG61546.1| unnamed protein product [Homo sapiens]
Length = 802
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|119220605|ref|NP_005144.2| ubiquitin carboxyl-terminal hydrolase 10 isoform 2 [Homo sapiens]
gi|2501458|sp|Q14694.2|UBP10_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|189054961|dbj|BAG37945.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|410249260|gb|JAA12597.1| ubiquitin specific peptidase 10 [Pan troglodytes]
Length = 803
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|60812207|gb|AAX36202.1| ubiquitin specific protease 10 [synthetic construct]
Length = 799
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|168274448|dbj|BAG09644.1| ubiquitin carboxyl-terminal hydrolase 10 [synthetic construct]
Length = 803
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|440918695|ref|NP_001259004.1| ubiquitin carboxyl-terminal hydrolase 10 isoform 1 [Homo sapiens]
Length = 802
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|410213036|gb|JAA03737.1| ubiquitin specific peptidase 10 [Pan troglodytes]
gi|410331583|gb|JAA34738.1| ubiquitin specific peptidase 10 [Pan troglodytes]
Length = 803
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|426383094|ref|XP_004058127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Gorilla
gorilla gorilla]
Length = 804
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 412 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 467
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 468 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 523
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 524 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 583
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 584 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 643
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 644 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 700
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 701 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 759
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 760 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 801
>gi|52545651|emb|CAB82392.2| hypothetical protein [Homo sapiens]
Length = 798
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|156382482|ref|XP_001632582.1| predicted protein [Nematostella vectensis]
gi|156219640|gb|EDO40519.1| predicted protein [Nematostella vectensis]
Length = 412
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 215/408 (52%), Gaps = 63/408 (15%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
K LL RGL+N N C++NATLQAL+ C PF L++++ IP+ T T +
Sbjct: 12 KPLLLRGLVNKANWCYINATLQALLVCPPFFNLMRQVEL--IPEREASTSTPIL------ 63
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------------------VPN 296
D+ ++ V+ G + P++ + TP + +
Sbjct: 64 DSIPLVTTNINPCMVVIFGNLYCPALLFSANTGKTPKSDFRTGPNLEPSYIGKMLATIES 123
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL----------------QGESTSINGANTALV 340
++S + QEDA+EFLS +++ +H+E++ L +G +N
Sbjct: 124 TLSAKGHQEDAEEFLSCLLNGIHEEMIVLSKLDPPLPKPESHESSEGVQDDLNIVAVEGQ 183
Query: 341 SLAEEDE----WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
++ +E+E WE VGP+NKS++TR SF S +SDIFGG L+S V G K SA V+PF
Sbjct: 184 TMDKEEEDAGDWEQVGPRNKSSITRVASFPSSLISDIFGGCLRSSVHQTGAKESANVEPF 243
Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
L LDI + V IEDAL + E L+G+ S T NA + +++ V + L K+LILH
Sbjct: 244 FCLQLDI--QNVSCIEDALNHLTVKEELQGFTCSKT-NAQIDVSRR-VSFEVLPKVLILH 299
Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDP 510
L RF Y GS KL K V +PL+LV+GR+LL +P+ +G + Y+L A V HHG+
Sbjct: 300 LKRFIYSKNGSQKLQKHVDYPLELVIGRELL-SPNVKGKYTLPKKTYKLCAVVYHHGKIS 358
Query: 511 SKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH----DQAYVLFYKQ 554
S GHYTAD + W+H DD + + +S VL Y+L+Y++
Sbjct: 359 SGGHYTADILHPTHGWVHTDDTKLKLVSSSFVLKPSPSKNPYLLYYRR 406
>gi|417412642|gb|JAA52698.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
[Desmodus rotundus]
Length = 772
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 380 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKAQRPCTSTPM 435
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 436 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 491
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + + + E+
Sbjct: 492 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKSHVENEEEQEEPGEGSE 551
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 552 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 611
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 612 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 668
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 669 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 727
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 728 VFQIGLNGWLRIDDQTVKVISQYQVVKPTADRTAYLLYYRRV 769
>gi|397500409|ref|XP_003820908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Pan paniscus]
Length = 802
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F + P ++ K + + G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIMRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|291228177|ref|XP_002734058.1| PREDICTED: ubiquitin specific peptidase 10-like [Saccoglossus
kowalevskii]
Length = 986
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 213/387 (55%), Gaps = 35/387 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSD 255
L PRGL N GN C++NATLQAL+SC P LL+ L + + G P + FV++
Sbjct: 602 LQPRGLNNVGNWCYINATLQALLSCPPMYNLLKSLPVTPLFRRGPSCTPMMDCLAHFVTE 661
Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
F K+ L G PF P+ +L V +S+S + RQEDA+EFL F++
Sbjct: 662 FTPMPKAGGVKRTAQDLRPGAPFEPTYVYRLLA----LVKSSMSTKGRQEDAEEFLGFVL 717
Query: 316 DQMHDELLK-LQGESTS-INGANTALVSLAEEDEWET--------------VGPKNKSAV 359
+ +H+E+L +QG++++ +NG ++A+ + D T VGPKNKS++
Sbjct: 718 NGLHEEMLACMQGDASAKMNGPSSAVNANGPSDGEVTAVNNDDDDEEEWEQVGPKNKSSI 777
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
TR +F S +S+IFGGQ++S V G+K SAT+QPF L LDI S+ + +++DAL+
Sbjct: 778 TRAANFSKSPISEIFGGQMRSAVHQHGSKESATLQPFFTLQLDIQSDKIWSVKDALQSLV 837
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPL 478
+ E L Y TSS N V + + ++ L +L+LHL RF Y S G K+ K + + +
Sbjct: 838 SRETLHDY-TSSKPNKLEVETIRKISLEELPPVLVLHLKRFVYDKSGGCQKMTKKIDYSV 896
Query: 479 QLVLGRDLLVTP-----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
L + ++LL + + R Y+L A V HHG S GHYT D + + W+ DD+
Sbjct: 897 DLEINKELLSSNVRSKLAQTQRSYKLFAVVYHHGVKASGGHYTCDFYHPGINGWVRTDDS 956
Query: 533 SVTAIGTSKVLHDQ----AYVLFYKQV 555
+V A+ +L AY+L+Y++
Sbjct: 957 NVHAVPIPSILRPMPPKFAYLLYYRRC 983
>gi|345487504|ref|XP_003425704.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Nasonia vitripennis]
Length = 936
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 208/389 (53%), Gaps = 33/389 (8%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 251
K LLPRGL N N C++N+ LQAL++C PF LL L +R+ K + P + +
Sbjct: 540 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSRNPSKHSPSPLIDNMIK 599
Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
F +F S G+ K+ +V+DI G PF PS +LKN + S+ GR
Sbjct: 600 FAREFTPLSEGARLARKDRAQKRNEDAVVDIQSGVPFEPSYIYTILKNTSSSGVFSVEGR 659
Query: 302 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNK 356
QEDA+EFLS +++ + DE+L+L + S+ + ++ E+EW+ +GPKNK
Sbjct: 660 --QEDAEEFLSCLLNGISDEMLELMKLANNNDQKSVECIDNSVNYSQGEEEWKVMGPKNK 717
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
++TR+ F + LSDIF GQL+S V +A+ VQPF L LDI E ++ AL
Sbjct: 718 GSITRSTDFGRTPLSDIFRGQLRSRVSRATEQATDYVQPFFTLQLDI--EKAESVRTALE 775
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
+ + LEG S T + A K V ++ L ILILHL F Y G +K+ KSV F
Sbjct: 776 ILVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYNPDGCSKIVKSVEF 833
Query: 477 PLQLVLGRDLL-----VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 530
P+ L + L+ S + R+Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 834 PIDLKIDNKLMSINAKTKLSQKQRQYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 893
Query: 531 DASVTAIGTSKVLHDQ----AYVLFYKQV 555
D+S+ + + VL+ Q Y+L+Y++
Sbjct: 894 DSSLKGVSEANVLNPQPPRVPYLLYYRRC 922
>gi|156549252|ref|XP_001599382.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Nasonia vitripennis]
Length = 933
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 208/389 (53%), Gaps = 33/389 (8%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 251
K LLPRGL N N C++N+ LQAL++C PF LL L +R+ K + P + +
Sbjct: 537 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSRNPSKHSPSPLIDNMIK 596
Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
F +F S G+ K+ +V+DI G PF PS +LKN + S+ GR
Sbjct: 597 FAREFTPLSEGARLARKDRAQKRNEDAVVDIQSGVPFEPSYIYTILKNTSSSGVFSVEGR 656
Query: 302 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNK 356
QEDA+EFLS +++ + DE+L+L + S+ + ++ E+EW+ +GPKNK
Sbjct: 657 --QEDAEEFLSCLLNGISDEMLELMKLANNNDQKSVECIDNSVNYSQGEEEWKVMGPKNK 714
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
++TR+ F + LSDIF GQL+S V +A+ VQPF L LDI E ++ AL
Sbjct: 715 GSITRSTDFGRTPLSDIFRGQLRSRVSRATEQATDYVQPFFTLQLDI--EKAESVRTALE 772
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
+ + LEG S T + A K V ++ L ILILHL F Y G +K+ KSV F
Sbjct: 773 ILVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYNPDGCSKIVKSVEF 830
Query: 477 PLQLVLGRDLL-----VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 530
P+ L + L+ S + R+Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 831 PIDLKIDNKLMSINAKTKLSQKQRQYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 890
Query: 531 DASVTAIGTSKVLHDQ----AYVLFYKQV 555
D+S+ + + VL+ Q Y+L+Y++
Sbjct: 891 DSSLKGVSEANVLNPQPPRVPYLLYYRRC 919
>gi|297284590|ref|XP_001111197.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Macaca
mulatta]
Length = 802
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 799
>gi|380785811|gb|AFE64781.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
gi|383411655|gb|AFH29041.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
gi|384942978|gb|AFI35094.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
Length = 798
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 795
>gi|395836805|ref|XP_003791338.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Otolemur
garnettii]
Length = 798
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKVVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV--------SLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ E I NG + L+ E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLMISNGPKSHLLDEYEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIDYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGGSATGGHYTTD 753
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|302793823|ref|XP_002978676.1| hypothetical protein SELMODRAFT_109291 [Selaginella moellendorffii]
gi|300153485|gb|EFJ20123.1| hypothetical protein SELMODRAFT_109291 [Selaginella moellendorffii]
Length = 245
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 166/255 (65%), Gaps = 12/255 (4%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
RQEDA EFL F+++Q+H+ELLKL G + S G +A +DEWETVGPKN++A RT
Sbjct: 1 RQEDAPEFLCFLLNQIHEELLKLDGRTVSEAG-------VAVDDEWETVGPKNRTARVRT 53
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA-- 420
S + S L+DIF GQL + VK +G+KAS V+PF +L LDI S VH++EDAL++
Sbjct: 54 CSRIWSPLTDIFCGQLYNNVKPKGSKASIQVEPFYVLTLDISSGTVHSVEDALKVCQVLT 113
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
E + YR + + K+ +L K+LIL L+RF YG+ G+ K+ +++ F QL
Sbjct: 114 REGMGRYRL--LLYFAFQDSSRGTKVVSLPKVLILQLLRFGYGNSGTRKVSRAIDFSEQL 171
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
+G++LL + +YEL+A++ HHG+D + GHYTADA+Y D WL FDD V +
Sbjct: 172 TVGKELLSPGNEATSRYELIASIMHHGKDVTSGHYTADAKY-GDSWLRFDDRMVDKVSVD 230
Query: 541 KVLHDQAYVLFYKQV 555
VL+ QAYVLFY+++
Sbjct: 231 MVLNKQAYVLFYRKL 245
>gi|302805713|ref|XP_002984607.1| hypothetical protein SELMODRAFT_120879 [Selaginella moellendorffii]
gi|300147589|gb|EFJ14252.1| hypothetical protein SELMODRAFT_120879 [Selaginella moellendorffii]
Length = 245
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 166/255 (65%), Gaps = 12/255 (4%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
RQEDA EFL F+++Q+H+ELLKL G + S V +A +DEWETVGPKN++A RT
Sbjct: 1 RQEDAPEFLCFLLNQIHEELLKLDGRTVS-------EVGVAVDDEWETVGPKNRTARVRT 53
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA-- 420
S + S L+DIF GQL + VK +G+KAS V+PF +L LDI S VH++EDAL++
Sbjct: 54 CSRIWSPLTDIFCGQLYNNVKPKGSKASIQVEPFYVLTLDISSGTVHSVEDALKVCQVLT 113
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
E + YR + + K+ +L K+LIL L+RF YG+ G+ K+ +++ F QL
Sbjct: 114 REGVGRYRL--LLYFAFQDSSRGTKVVSLPKVLILQLLRFGYGNSGTRKVSRAIDFSEQL 171
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
+G++LL + +YEL+A++ HHG+D + GHYTADA+Y D WL FDD V +
Sbjct: 172 TVGKELLSPGNEATSRYELIASIMHHGKDVTSGHYTADAKY-GDSWLRFDDRMVDKVSVD 230
Query: 541 KVLHDQAYVLFYKQV 555
VL+ QAYVLFY+++
Sbjct: 231 MVLNKQAYVLFYRKL 245
>gi|403260840|ref|XP_003922859.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Saimiri
boliviensis boliviensis]
Length = 802
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 214/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKMARDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E++ L+ ++ S+ E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMVNLKKLLSPNNEKLTISNGPKNHSVREEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVRPTAERTAYLLYYRRV 799
>gi|149642779|ref|NP_001092394.1| ubiquitin carboxyl-terminal hydrolase 10 [Bos taurus]
gi|292630919|sp|A5PJS6.1|UBP10_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|148743862|gb|AAI42224.1| USP10 protein [Bos taurus]
gi|296478182|tpg|DAA20297.1| TPA: ubiquitin carboxyl-terminal hydrolase 10 [Bos taurus]
Length = 800
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 213/402 (52%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 408 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 463
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 464 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 519
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 520 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 579
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 580 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 639
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 640 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 696
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 697 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 755
Query: 519 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 555
+ WL DD +V + + AY+L+Y++V
Sbjct: 756 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 797
>gi|440908740|gb|ELR58726.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Bos grunniens
mutus]
Length = 794
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 213/402 (52%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 402 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 457
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 458 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 513
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 514 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 573
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 574 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 633
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 634 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 690
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 691 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 749
Query: 519 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 555
+ WL DD +V + + AY+L+Y++V
Sbjct: 750 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 791
>gi|348509749|ref|XP_003442409.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Oreochromis niloticus]
Length = 859
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 224/408 (54%), Gaps = 51/408 (12%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD---IPKAG 242
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + + P
Sbjct: 462 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLHNETQRPCTS 517
Query: 243 YPTLTAFVGFVSDFDT-PSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + FV V++F+ P +K++ + DI G PF P+ +L + +
Sbjct: 518 TPMIDNFVRLVNEFNNMPVPSKAKQQAVGDKVTKDIRPGAPFEPTYIYKLLTL----IKS 573
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANTALVSLAEEDEWE 349
S+S + RQEDA+E+L F ++ +H+E+L L + ++ + NG + EED +
Sbjct: 574 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESE--PGVEEDGAD 631
Query: 350 -----------TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF
Sbjct: 632 KEEEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFT 691
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
L LDI S+ + T+++AL A E+++GY TS T + + V ++ L +L+LHL
Sbjct: 692 LQLDIQSDKIRTVQEALETLVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLK 748
Query: 459 RFSY-GSQGSTKLHKSVRFPLQLVLGRDLLV----TPSAEG-RKYELVATVTHHGRDPSK 512
RF + S G KL K++ +P+ L + +DLL + +G R Y L A V HHG +
Sbjct: 749 RFVFEKSGGCQKLTKNIDYPVDLEISKDLLSSGVRSKVVKGQRTYRLFAVVYHHGNSATG 808
Query: 513 GHYTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
GHYT D + + WL DD +V I +V+ AY+L+Y++V
Sbjct: 809 GHYTTDVFHIGLNGWLRIDDQTVKVINQYQVVKQTAERTAYLLYYRRV 856
>gi|390477989|ref|XP_002761263.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Callithrix
jacchus]
Length = 918
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 211/402 (52%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 526 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPLYSKVQRPCTSTPM 581
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + DI G F P+ +L +S+S
Sbjct: 582 IDSFVRLMNEFTNMPVPPKPRQALGDKMARDIRPGAAFEPTYIYRLLTVNK----SSLSE 637
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E++ L+ ++ S+ E
Sbjct: 638 KGRQEDAEEYLGFILNGLHEEMVNLKKLLSPNNDKLKISNGPKNHSVREEEQEEQGEGSE 697
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 698 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 757
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 758 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 814
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 815 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 873
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD +V +V+ AY+L+Y++V
Sbjct: 874 VFQIGLNGWLRIDDQTVKVTNQYQVVRPTAERTAYLLYYRRV 915
>gi|426243414|ref|XP_004023443.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 10 [Ovis aries]
Length = 844
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 452 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 507
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 508 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 563
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ E E
Sbjct: 564 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKSHSVNEDEQEEPGEGSE 623
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 624 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 683
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 684 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 740
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 741 GGCQKLIKNIEYPVDLEISKELL-SPGVKSKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 799
Query: 519 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 555
+ WL DD +V + + AY+L+Y++V
Sbjct: 800 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 841
>gi|281205802|gb|EFA79991.1| ubiquitin hydrolase B [Polysphondylium pallidum PN500]
Length = 991
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 216/416 (51%), Gaps = 54/416 (12%)
Query: 186 MKAINEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSPFVQLLQ------ELRTRD 237
+K +E V K + +GL+N N CF+N LQ+L+ C PFV+LL+ E+
Sbjct: 576 LKTFDEQVHKTKAITFQSKGLVNIANTCFMNVILQSLVGCQPFVKLLKNISSSSEVLDHH 635
Query: 238 IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL-------DIGRPFSPSMFEAVLKNF 290
+ YPTL + F +D+ + + ++ + + + I P +P F ++K+F
Sbjct: 636 SQHSKYPTLLNLIQFNNDYFSLTTTTNNQSSSNSSKFMNNNHSIPNPINPKYFSDLVKSF 695
Query: 291 TPDVPN----------SISGRPRQE-------------------DAQEFLSFIMDQMHDE 321
V SI ++ DAQEFL++ +D +H+E
Sbjct: 696 NSKVSPSPPATQPPPLSIPLSKKKSKLMVFEQQQQQLTQQSCQQDAQEFLTYFLDLIHEE 755
Query: 322 LLKLQGESTSING-ANTALVSLAEEDEWETVGPKNKSAVTRTQS--FLPSALSDIFGGQL 378
L+ L E I G L+ + EWE VG KNK++ QS S +S IF G L
Sbjct: 756 LVSLVRE---IEGPKEEPLIPDDLDGEWEVVGQKNKTSTINDQSNTSTSSPISQIFSGTL 812
Query: 379 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
+S V +K S T+QPF LHLDI E ++T++DAL LF E LEGY T T +
Sbjct: 813 RSSVNKHESKESITLQPFYCLHLDIRPENIYTLDDALSLFMKEEALEGY-TCQTKKIE-I 870
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
TA KS+ I+ L +ILI+H RF+Y ++ KL K + FP QL L + + S + +KY
Sbjct: 871 TASKSMSIEILPRILIVHFKRFAYDTKAQ-KLDKHISFPTQLTLKSHMPIK-SDQTKKYS 928
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L + V+HHG+ S+GHYT D N+QW+ FDDAS++ + ++L +AY+L Y+Q
Sbjct: 929 LFSVVSHHGKGLSQGHYTCDVLQQNNQWVKFDDASMSDVTEQEILSREAYLLLYQQ 984
>gi|355710448|gb|EHH31912.1| hypothetical protein EGK_13069, partial [Macaca mulatta]
Length = 792
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PR LI+ GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRELISKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 571
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 572 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 789
>gi|157137881|ref|XP_001664058.1| hypothetical protein AaeL_AAEL003733 [Aedes aegypti]
gi|108880727|gb|EAT44952.1| AAEL003733-PA [Aedes aegypti]
Length = 1584
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 35/383 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 253
+LPRGLIN N C++NA LQAL++C PF L++ +R+ +P A P + A V
Sbjct: 1147 ILPRGLINRSNYCYINAILQALVACPPFYHLMRAIRS--LPAARNSKHQKPFIDAMSALV 1204
Query: 254 SDFDTPSGGS------SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
+F T S +KK + P P M +L D+ + GR QEDA
Sbjct: 1205 DEFSTLQLRSKVQRDKTKKDETPEIQCDSPMEPLMIHRMLNLLRSDI-FQVEGR--QEDA 1261
Query: 308 QEFLSFIMDQMHDE---LLKLQGESTSINGANTA--LVSLAEEDEWETV-GPKNKSAVTR 361
+EFL ++++++DE L+KL + +NG + A V ++D+W+ + G +NK VTR
Sbjct: 1262 EEFLGCVLNRLNDEMIELMKLSKNESDVNGDDAANGEVHPDDQDDWKVIRGNRNKGTVTR 1321
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
T F S +SDIFGG+L+S V +G+ A+ +QPF L LDI E +++DAL L
Sbjct: 1322 TTDFGRSPMSDIFGGKLRSRVHREGDHATDNIQPFFTLQLDI--EKATSVKDALDLLVGK 1379
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
+ LEG S T + A + V ++ L ++ILHL F Y G TK+ K++ FP++L
Sbjct: 1380 DQLEGVTCSKTKQE--IAAWQQVTLEELPIVMILHLKCFDYKMDGCTKILKALEFPIELK 1437
Query: 482 LGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTA 536
+ L+ + +A+ ++Y+L A V H G++ SKGHY D + W+ +DD++V
Sbjct: 1438 IDSKLMSSKGKSYTAKQKQYKLFAVVYHDGKEASKGHYITDVFHAGYGSWIRYDDSTVKP 1497
Query: 537 IGTSKVLHDQA----YVLFYKQV 555
+ + VLH ++ Y+L+Y+++
Sbjct: 1498 VSENNVLHPKSPRVPYLLYYRRL 1520
>gi|432852750|ref|XP_004067366.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Oryzias
latipes]
Length = 855
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 220/407 (54%), Gaps = 50/407 (12%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + + +
Sbjct: 459 VKLMHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSITLHNETQRTCTS 514
Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNIS----VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + FV V++F S K+ + DI G PF P+ +L + +
Sbjct: 515 TPMIDNFVRLVNEFSNMPVPSKTKQQAAGEKVTKDIRPGVPFEPTYIYRLLTL----IKS 570
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEED---- 346
S+S + RQEDA+E+L F ++ +H+E+L L Q E+ + NG + EED
Sbjct: 571 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEETPTPNGPESQ--PGVEEDLPDK 628
Query: 347 -------EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
EWE VGP+NK ++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L
Sbjct: 629 EEEESDDEWEQVGPRNKISITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTL 688
Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
LDI SE + T+++AL A E+++GY TS T + + V ++ L +L+LHL R
Sbjct: 689 QLDIQSEKIRTVQEALETLVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLKR 745
Query: 460 FSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-----RKYELVATVTHHGRDPSKG 513
F + + G KL K+V +P+ L + +DLL + R Y L A V HHG + G
Sbjct: 746 FVFEKTGGCQKLTKNVDYPVDLEISKDLLSSGVRSKILKGQRTYRLFAVVYHHGNSATGG 805
Query: 514 HYTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
HYT D + + WL DD +V I +V+ AY+L+Y++V
Sbjct: 806 HYTTDVFHIGLNGWLRIDDQTVKIINQYQVVKQTAERTAYLLYYRRV 852
>gi|291414098|ref|XP_002723302.1| PREDICTED: ubiquitin specific protease 10 [Oryctolagus cuniculus]
Length = 790
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 217/401 (54%), Gaps = 46/401 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L P P
Sbjct: 399 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFLPLYSKAQRPCTSTPM 454
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 455 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 510
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANT-------ALVSLAEED 346
+ RQEDA+E+L FI++ +H+E+L L+ GE +I NG + E+
Sbjct: 511 KGRQEDAEEYLGFILNGLHEEMLGLKKLLAAHGEQLAIPNGPRSRPGTQEQEEEGEGSEE 570
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+
Sbjct: 571 EWEQVGPRNKTSVTRQADFVQTPITCIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSD 630
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 465
+ T++DAL A E+++GY T S V + V ++ L +L+LHL RF Y +
Sbjct: 631 KIRTVQDALESLVARESVQGYTTKSKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 687
Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA 519
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 688 GCQKLIKNIDYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDV 746
Query: 520 RYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD SV I +V+ AY+L+Y++V
Sbjct: 747 FQIGLNGWLRIDDQSVRVITQYQVVKPAAERTAYLLYYRRV 787
>gi|348550306|ref|XP_003460973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Cavia
porcellus]
Length = 945
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
+++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 553 VHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 608
Query: 246 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 609 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVSK----SSLSE 664
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ---------------GESTSINGANTALVSLAEE 345
+ RQEDA+E+L F+++ +H+E+L L+ S S +G S E
Sbjct: 665 KGRQEDAEEYLGFVLNGLHEEMLSLKKLLSPGSTKLLVSNGPRSPSADGEEQEAGSEGSE 724
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
+EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 725 EEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 784
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 785 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 841
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 842 GGCQKLAKNIEYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 900
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD SV + +VL AY+L+Y++V
Sbjct: 901 VFQIGLNGWLRMDDQSVRVVPQHQVLRPAAERSAYLLYYRRV 942
>gi|351706494|gb|EHB09413.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Heterocephalus
glaber]
Length = 787
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 214/392 (54%), Gaps = 43/392 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 255
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 401 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 460
Query: 256 F---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 461 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 516
Query: 311 LSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLA--------EEDEWETVGPKN 355
L FI++ +H+E+L L+ E ++ NG + L A E+EWE VGP+N
Sbjct: 517 LGFILNGLHEEMLSLKRLLSPDSEKLTVSNGPRSPLPKDAAQQEQGEGSEEEWEQVGPRN 576
Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 577 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 636
Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 474
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 637 ESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLAKNI 693
Query: 475 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 694 DYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 752
Query: 528 HFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
DD V I +VL AY+L+Y++V
Sbjct: 753 RIDDQVVKVIQQYQVLKPAAERTAYLLYYRRV 784
>gi|431838529|gb|ELK00461.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Pteropus alecto]
Length = 797
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 405 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 460
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 461 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLAV----IKSSLSE 516
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 517 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVNEEEQEEPGEGSE 576
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
+EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 577 EEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 636
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 637 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 693
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 694 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKSFKCHRTYRLFAVVYHHGSSATGGHYTTD 752
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 555
+ WL DD V I +V+ AY+L+Y++V
Sbjct: 753 VFQIGLNGWLRIDDQMVKVINQYQVVKPTADRTAYLLYYRRV 794
>gi|70991228|ref|XP_750463.1| ubiquitin C-terminal hydrolase [Aspergillus fumigatus Af293]
gi|66848095|gb|EAL88425.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
Af293]
gi|159130936|gb|EDP56049.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
A1163]
Length = 872
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 403 LEPRGLINTGNMCYMNSVLQILVSCIPFYQFLDHVGRRISHSVQSAFPMVDAMIMFMKEF 462
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTP--DVPNSISGRPRQEDAQ 308
S++ K + D G F+P V++ + D+ R Q+DAQ
Sbjct: 463 RVIDAAPSEEQLRLRLKPNELEDYGEAFTPDFVYEVIRQLSRFRDM-----QRGHQQDAQ 517
Query: 309 EFLSFIMDQMHDELLKL-QGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQ 363
EFL F++++MH+E ++ + ST+ A+ S+ +E++ W VG K K+A+TR+
Sbjct: 518 EFLGFLLEEMHEECVRAAKNASTTKPAASITAESIDKEEQSGDGWLEVGHKQKAAITRSS 577
Query: 364 SFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+ S ++ IFGG+++S K GNK S T++P+ L LDI S +H I DAL+ + P
Sbjct: 578 GHITQESPITRIFGGKIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDIHNIVDALKGLTKP 637
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 479
E+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K + +PL
Sbjct: 638 ESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKIGYPLD 695
Query: 480 LVLGRDLLVTPS-----AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
L + R++ A G KY L+ + HHGR+ S GHYT D R + +W+ DD
Sbjct: 696 LEIPREVFAPNKRNVMMAHGGLPKYRLIGVIYHHGRNASGGHYTVDVRRQDGREWIRLDD 755
Query: 532 ASVTAIGTSKV 542
+ I + V
Sbjct: 756 TVIRRIKSEDV 766
>gi|332846499|ref|XP_511147.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Pan
troglodytes]
Length = 780
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 206/396 (52%), Gaps = 57/396 (14%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN- 523
G KL K++ +P+ L E+ V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDL-----------------EISKVVYHHGNSATGGHYTTDVFQIGL 741
Query: 524 DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 742 NGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 777
>gi|350408371|ref|XP_003488381.1| PREDICTED: hypothetical protein LOC100746491 [Bombus impatiens]
Length = 928
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 204/389 (52%), Gaps = 34/389 (8%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 251
K LLPRGL N N C++N+ LQAL++C PF LL L ++ K + P + +
Sbjct: 533 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKSSNKMSSTPLIDNMIK 592
Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
FV +F S G+ +K+ S++DI G F P +LKN + S+ GR
Sbjct: 593 FVHEFTPLSDGARLARKDRANKRGEDSIVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 652
Query: 302 PRQEDAQEFLSFIMDQMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPKNKS 357
QEDA+EFLS +++ ++DE+L+L + N + E+EW+ +GPKNK
Sbjct: 653 --QEDAEEFLSCLLNGINDEMLELIKLVNNDQNVTNNIENNISYNNGEEEWKVMGPKNKG 710
Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
++TR F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 711 SITRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEI 768
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
+ LEG S T + A K V ++ L ILILHL F Y G +K+ KSV FP
Sbjct: 769 LVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFP 826
Query: 478 LQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 530
+ L L L +P+A + + Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 827 IDLKLDSKFL-SPNAIKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 885
Query: 531 DASVTAIGTSKVLHDQ----AYVLFYKQV 555
D+S+ + S VL Y+L+Y++
Sbjct: 886 DSSLKGVSESNVLKPTPPRVPYLLYYRRC 914
>gi|119496357|ref|XP_001264952.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
181]
gi|119413114|gb|EAW23055.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
181]
Length = 863
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 205/371 (55%), Gaps = 34/371 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 394 LEPRGLINTGNMCYMNSVLQILVSCIPFYQFLDHVGRRASHSVQSAFPMVDAMIMFMKEF 453
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTP--DVPNSISGRPRQEDAQ 308
S++ K + + G F+P V++ + D+ R Q+DAQ
Sbjct: 454 RVIDAAPSEEQLRLRLKPNELEEYGEAFTPDFVYEVIRQLSRFRDM-----QRGHQQDAQ 508
Query: 309 EFLSFIMDQMHDELLKL-QGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQ 363
EFL F++++MH+E ++ + ST+ A+T S+ +E++ W VG K K+AVTR+
Sbjct: 509 EFLGFLLEEMHEECVRAAKNASTTKPAASTTAESIDKEEQSGDGWLEVGHKQKAAVTRSS 568
Query: 364 SFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+ S ++ IFGG+++S K GNK S T++P+ L LDI S ++ I DAL+ + P
Sbjct: 569 GHIAQESPITRIFGGKIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDINNIVDALKGLTKP 628
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 479
E+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K + +PL
Sbjct: 629 ESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKIGYPLD 686
Query: 480 LVLGRDLLVTPS-----AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
L + R++ A G KY L+ + HHGR+ S GHYT D R + +W+ DD
Sbjct: 687 LEIPREVFAPNKRNIMMAHGGLPKYRLIGVIYHHGRNASGGHYTVDVRRQDGREWIRLDD 746
Query: 532 ASVTAIGTSKV 542
+ I + V
Sbjct: 747 TVIRRIKSEDV 757
>gi|380027295|ref|XP_003697363.1| PREDICTED: uncharacterized protein LOC100867068, partial [Apis
florea]
Length = 917
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 204/389 (52%), Gaps = 34/389 (8%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVG 251
K LLPRGL N N C++N+ LQAL++C PF LL L P + P + +
Sbjct: 522 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKNPSKMSSTPLIDNMIK 581
Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
FV +F S G+ +K+ +++DI G F P +LKN + S+ GR
Sbjct: 582 FVHEFTPLSDGARLARKDRANKRGEDTIVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 641
Query: 302 PRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAE-EDEWETVGPKNKS 357
QEDA+EFLS +++ ++DE+L KL +I + ++ E+EW+ +GPKNK
Sbjct: 642 --QEDAEEFLSCLLNGINDEMLELIKLVNNDQNITSNIESNINYNNGEEEWKVMGPKNKG 699
Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
++TR F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 700 SITRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEI 757
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
+ LEG S T + A K V ++ L ILILHL F Y G +K+ KSV FP
Sbjct: 758 LVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFP 815
Query: 478 LQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 530
+ L L L +P+A + + Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 816 IDLKLDSKFL-SPNAIKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 874
Query: 531 DASVTAIGTSKVLHDQ----AYVLFYKQV 555
D+S+ I + VL Y+L+Y++
Sbjct: 875 DSSLKGISENNVLKPTPPRVPYLLYYRRC 903
>gi|384490748|gb|EIE81970.1| hypothetical protein RO3G_06675 [Rhizopus delemar RA 99-880]
Length = 562
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 201/391 (51%), Gaps = 56/391 (14%)
Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLT 247
EP + L PRGLIN+ N CF+N LQ L C PF L++ + T+ +I K+ P L
Sbjct: 196 EPTFNAPLLQPRGLINNVNTCFMNVILQPLSHCPPFYNLIKTISTKVAHNI-KSKTPLLD 254
Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVL---KNFTPDVPNSISGRPRQ 304
+ + F+++F T ++ S+ G PF P L K F + R RQ
Sbjct: 255 SIIEFINEFQT-------ERLDSLEQYGEPFVPEYVYNALRGQKKFD-------TLRGRQ 300
Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEEDEWETVGPKNKSAV 359
ED++EFL F++D +H+E++ + E + NG N DEW VG KNK++
Sbjct: 301 EDSEEFLCFLLDGLHEEMINVLKERETKRLEEDNGKN---------DEWLEVGAKNKTSN 351
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
RT F S +S IFGG+++SV++ G K S ++P+ L LDI E VH++EDA+ +
Sbjct: 352 LRTTGFDESPISKIFGGKVRSVLRCPGAKDSINLEPYQSLPLDIQPENVHSVEDAIANMT 411
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPL 478
PE + Y TS G V A K V + L +LILH+ RF + + G KL K V +
Sbjct: 412 LPEIMHDY-TSPKGLK--VEATKQVYFEKLPSVLILHMKRFVFDNVGGVQKLSKRVSYGS 468
Query: 479 QLVLGRDLL--VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
QLV+ + + V AE Y+L V HHG GHYT D + N +WLH DD ++T
Sbjct: 469 QLVIDPEWMVHVMRQAEPVTYKLFGIVYHHGSSAGGGHYTCDIKRRNGEWLHIDDTTITP 528
Query: 537 IG-------------TSKVLH--DQAYVLFY 552
+ TS+ +H AY+LFY
Sbjct: 529 VSEKDVLVTEEENTRTSEKIHAGQTAYILFY 559
>gi|91092940|ref|XP_972197.1| PREDICTED: similar to CG32479 CG32479-PA [Tribolium castaneum]
gi|270004786|gb|EFA01234.1| ubiquitin-specific protease [Tribolium castaneum]
Length = 633
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 198/378 (52%), Gaps = 29/378 (7%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLL---QELRTRDIPKAGYPTLTAFVGFVSD 255
L PRGLIN N C++N+ LQAL++C P LL E T + P + FV +
Sbjct: 256 LQPRGLINKSNYCYINSILQALLACPPVYNLLVGLSEQNTTAQKEKATPIIDGMCRFVKE 315
Query: 256 FD-TPSG--------GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
F P+G + KK+ ++D PF PS +L D+ + GR QED
Sbjct: 316 FQHLPAGLRVNRRNDKNQKKEQGLMIDYDLPFEPSWIYKMLNGVRSDL-FLVEGR--QED 372
Query: 307 AQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
A+EFL +++ ++DE+L KL +IN + + EW+ +GPKNK ++TR
Sbjct: 373 AEEFLGCLLNGLNDEMLELMKLVKSDLTINKFESKTSDQDTDKEWQVMGPKNKGSITRQM 432
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
F+ + +S+IFGG LKS + G+ ++ +QPF L L+I E V T+ +AL
Sbjct: 433 EFVKTPISNIFGGFLKSRIHRTGDHSTYNIQPFFTLQLNI--EKVKTVREALEALVTKNQ 490
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
LEG T V A + V ++ L ILILHL F + G TK+ K++ FP+ L +
Sbjct: 491 LEGVTNEKTNEE--VEAWQQVTLEELPVILILHLKCFDFKLDGCTKIVKALEFPIDLKID 548
Query: 484 RDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTS 540
LL + S + ++Y+L A V H G++ +KGHY DA + W+ +DDASV ++
Sbjct: 549 SKLLSSKPMSPKEKQYKLFAVVYHDGKEATKGHYITDAFHVGYSSWIRYDDASVKSVQED 608
Query: 541 KVLHDQA----YVLFYKQ 554
VL Q Y+LFY++
Sbjct: 609 YVLKPQGTRVPYLLFYRR 626
>gi|390352547|ref|XP_794239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-B-like
[Strongylocentrotus purpuratus]
Length = 823
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 214/397 (53%), Gaps = 52/397 (13%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSD 255
+L PRGLIN+ N C++N+ LQAL+SC PF +++ + + + + P L A F+ +
Sbjct: 429 NLQPRGLINTANWCYINSILQALLSCPPFYHIMRNMPLNNGVRKSSSTPMLDAMYKFLKE 488
Query: 256 FDTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN-SISGRP-RQEDAQEFL 311
F G S + S LDI G F P++ +L V N S+S + RQEDA+EFL
Sbjct: 489 FQEMKGLSKR----SPLDIRTGTCFEPTVIYQMLS-----VANTSLSVKHGRQEDAEEFL 539
Query: 312 SFIMDQMHDELLKL---------QGESTSINGANTALVSLA-------------EEDEWE 349
S +++ +HDE+ L Q + NG ++ V++A ++DEWE
Sbjct: 540 SCLLNGLHDEMTSLIQLYNGEDVQANDSKQNGPASSSVAVANGDVGNGHPEEGSDDDEWE 599
Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
VGP+NK+++TR F S LS IFGG ++S + G+K SAT+QPF L LDI S+ +
Sbjct: 600 QVGPRNKTSITRKAQFSSSPLSKIFGGIMRSALHQHGSKESATLQPFFSLQLDIQSQDIW 659
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGST 468
+++ AL E++ G+ ++ T V A + + ++ L +LILHL RF Y S G
Sbjct: 660 SVQHALDNLGNRESVHGFMSNKTKKE--VEAFRRITLEELPPVLILHLKRFLYDKSGGCQ 717
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF 522
KL K + + +++ + +D L++P+ + R Y+L A V H G++ S GHY D +
Sbjct: 718 KLMKKIEYAMEIEINKD-LISPNTKSRIGLVQRTYKLFAVVYHTGKEASGGHYITDVYHV 776
Query: 523 -NDQWLHFDDASVTAIGTSKVLHDQA----YVLFYKQ 554
WL DD V + ++V+ Y+LFY++
Sbjct: 777 GTSAWLRCDDGIVKPVKAAQVIKPLTTCIPYLLFYRR 813
>gi|322802987|gb|EFZ23111.1| hypothetical protein SINV_02090 [Solenopsis invicta]
Length = 933
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 211/396 (53%), Gaps = 45/396 (11%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 248
K LLPRGL N N C++N+ LQAL++C PF LL L +PK + P +
Sbjct: 537 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLTAL---PLPKNRGRNSATPLIDN 593
Query: 249 FVGFVSDFD--TPSGGSSKKKNI------SVLDI--GRPFSPSMFEAVLKNFTPDVPNSI 298
V FV +F T + +K + +V+DI G F PS +LKN + S+
Sbjct: 594 MVKFVREFSPLTEAARMPRKDRVHKRGEDTVMDIYSGIAFEPSYVYTMLKNASAAGAFSV 653
Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPK 354
GR QEDA+EFLS +++ ++DE+L+L + +I+ A + + +E+EW+ +GPK
Sbjct: 654 EGR--QEDAEEFLSCLLNGINDEMLELIKLVSNDQNAISNAKN-VSNEHDEEEWQVMGPK 710
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
NK AVTR F + LSDIF GQL+S V G + + VQPF L LD+ + ++ A
Sbjct: 711 NKGAVTRCTEFERTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVRHA 768
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKL 470
L + + +EG S T + A K V ++ L ILILHL F Y S G +K+
Sbjct: 769 LEILVGKDQVEGLTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKFSNGCSKI 826
Query: 471 HKSVRFPLQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN- 523
K+V FP+ L + L +P+ + ++Y+L A H G++ +KGHY DA +
Sbjct: 827 LKTVEFPIDLKIDGKFL-SPNTVKKLGPKQKQYKLFAVTYHDGKEATKGHYFTDAFHVGY 885
Query: 524 DQWLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 555
W+ +DD++V ++ S VL + Y+L+Y++
Sbjct: 886 GSWVRYDDSTVKSVPESNVLRPTSPRVPYLLYYRRC 921
>gi|452837008|gb|EME38951.1| hypothetical protein DOTSEDRAFT_75600 [Dothistroma septosporum
NZE10]
Length = 897
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 198/372 (53%), Gaps = 38/372 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF L ++R R + K+ P + A + FV +F
Sbjct: 433 LEPRGLVNTGNMCYMNSILQVLVFCVPFYSFLDQVRQRTVHSLKSDTPLVDAMIMFVREF 492
Query: 257 D----TPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQ 308
P+ + + K + G P +P V++ +G R Q+DA+
Sbjct: 493 KILARAPTADTLRPVLKQEQLEQYGEPCTPEYVYEVIQRLP-----RFAGMRRGHQQDAE 547
Query: 309 EFLSFIMDQMHDELLK-LQGESTS------INGANTALVSLAEEDEWETVGPKNKSAVTR 361
EFL F+++ +HDE +K +QG++ + I+ + + A +D W VGPK K+A TR
Sbjct: 548 EFLGFLLEGLHDECVKVMQGQTDTHRQQIGISCPGSVASATAADDGWLEVGPKQKAAETR 607
Query: 362 T--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T Q P+ ++ IFGG L+S ++ G K S T++P+ L LDI ++ V+ I DAL+ +
Sbjct: 608 TAGQQDAPTPITKIFGGHLRSELRVPGKKDSVTLEPYKPLQLDIGAQNVNNIIDALKGLT 667
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPL 478
PE EG GN TAKK V I+TL +L+LHL RF Y S G T K+ K + +PL
Sbjct: 668 IPEAFEG-DFGGRGN----TAKKQVFIETLPPVLVLHLKRFQYDSSGGTQKIWKKIGYPL 722
Query: 479 QLVLGRDLLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFD 530
L + +++ G +Y L A V HHG+ + GHYT D R + +W+ D
Sbjct: 723 DLEIPKEVFAPAKRAGMGATKSLPRYRLTAVVYHHGKSAAGGHYTVDVLRQDSREWVRMD 782
Query: 531 DASVTAIGTSKV 542
D + I V
Sbjct: 783 DTIIRRIRPEDV 794
>gi|317137707|ref|XP_001727905.2| ubiquitin hydrolase [Aspergillus oryzae RIB40]
Length = 870
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 201/376 (53%), Gaps = 42/376 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 404 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 463
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S++ K + G F P V++ P + G Q+DAQEF
Sbjct: 464 RVIDAAHSEEQLRLRLKPNELEQYGDAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 520
Query: 311 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE---------DEWETVGPKNKSAV 359
L F++++MH+E + ST +GA SL+EE D W VG K K AV
Sbjct: 521 LGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWLEVGHKQKPAV 576
Query: 360 TRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
TR+ + S + IFGGQ++S K GNK S T++P+ L LDI S ++ I DAL+
Sbjct: 577 TRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPEINNIVDALKG 636
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVR 475
+ PE+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K V
Sbjct: 637 LTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKVG 694
Query: 476 FPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQW 526
+PL L + R++L P+ A+G KY L+ + HHG++ S GHYT D R + +W
Sbjct: 695 YPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREW 753
Query: 527 LHFDDASVTAIGTSKV 542
+ DD + + + V
Sbjct: 754 IRLDDTVIRRVRSEDV 769
>gi|391871138|gb|EIT80303.1| ubiquitin-specific protease [Aspergillus oryzae 3.042]
Length = 878
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 201/376 (53%), Gaps = 42/376 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 412 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 471
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S++ K + G F P V++ P + G Q+DAQEF
Sbjct: 472 RVIDAAHSEEQLSLRLKPNELEQYGDAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 528
Query: 311 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE---------DEWETVGPKNKSAV 359
L F++++MH+E + ST +GA SL+EE D W VG K K AV
Sbjct: 529 LGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWLEVGHKQKPAV 584
Query: 360 TRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
TR+ + S + IFGGQ++S K GNK S T++P+ L LDI S ++ I DAL+
Sbjct: 585 TRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPEINNIVDALKG 644
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVR 475
+ PE+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K V
Sbjct: 645 LTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKVG 702
Query: 476 FPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQW 526
+PL L + R++L P+ A+G KY L+ + HHG++ S GHYT D R + +W
Sbjct: 703 YPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREW 761
Query: 527 LHFDDASVTAIGTSKV 542
+ DD + + + V
Sbjct: 762 IRLDDTVIRRVRSEDV 777
>gi|440640781|gb|ELR10700.1| hypothetical protein GMDG_04961 [Geomyces destructans 20631-21]
Length = 883
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 205/373 (54%), Gaps = 35/373 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF +LL ++ R K+ P + A + F+ +F
Sbjct: 420 LEPRGLVNTGNMCYMNSVLQVLVFCVPFYELLDQVGKRAAHSFKSDTPLIDAMIMFMREF 479
Query: 257 DT-PSGGSSKKKNISVLD-----IGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQE 309
S S +K + + D G F+P V++ P S R Q+D +E
Sbjct: 480 PIIDSAVSVEKLRMRLKDNELEKYGDAFTPDFVYEVIRTL----PRFASMRRGHQQDTEE 535
Query: 310 FLSFIMDQMHDELLKLQGESTSINGA----NTALVSLAEE------DEWETVGPKNKSAV 359
FL F+++ +HDE +++ ++S++G+ ++ VS A + W VGPK K+A+
Sbjct: 536 FLGFLLEGLHDECVQVMQSTSSVDGSPIVPSSPAVSQAGSVFGEGANGWLEVGPKQKAAI 595
Query: 360 TRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
TR+ + L S ++ IFGG L+SV++ G K S T++P+ L LDI+ +VH I DAL+
Sbjct: 596 TRSSGTRLDSPITKIFGGTLRSVLRVPGLKDSVTMEPYQPLQLDIHLPSVHNIIDALKGL 655
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFP 477
+ PE + G S G+ VTA K V I+TL +LILHL RF Y + G T K+ K V +P
Sbjct: 656 TKPETITGDFKSPRGSN--VTATKQVSIETLPPMLILHLKRFQYDNSGGTQKIWKKVGYP 713
Query: 478 LQLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
L+L + +++ G +Y L A V HHG++ S GHYT D R + +W+
Sbjct: 714 LELEIPKEVFARQKQGGILNHGGLPRYRLTAVVYHHGKNASGGHYTVDVRRQDGREWVRL 773
Query: 530 DDASVTAIGTSKV 542
DD + + + V
Sbjct: 774 DDTVIRRVKSEDV 786
>gi|307204000|gb|EFN82904.1| Ubiquitin carboxyl-terminal hydrolase 10 [Harpegnathos saltator]
Length = 825
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 197/380 (51%), Gaps = 29/380 (7%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFV 253
L+PRGL N N C++N+ LQALMSCS F L + + + + P++ + + F+
Sbjct: 441 LVPRGLTNRNNYCYINSILQALMSCSLFYNLFKAMPHPKNCNKQNKHSTIPSINSLIRFI 500
Query: 254 SDFDT-------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
+F+ P + K++ +++ G PS +LK + + GR QED
Sbjct: 501 REFNPLPENARLPRKARANKRDDIIIENGVALEPSYMYTMLKYTSSAGVFPVEGR--QED 558
Query: 307 AQEFLSFIMDQMHDELLKLQG-ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
A+EFLS +++ ++DE+L L + N N A + +E+EW +GPKNK ++TR+
Sbjct: 559 AEEFLSCLLNAINDEMLDLMKLANNEHNDINNAEKNDGKEEEWRVIGPKNKGSITRSTEL 618
Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ LSDIF G+ +S V G + S +QPF L LDI E ++++AL + + + LE
Sbjct: 619 ERTPLSDIFRGKSRSRVSRPGEQPSDNIQPFFTLQLDI--EKADSVKEALDILVSKDRLE 676
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
G S T + A K + ++ L +LILHL F Y G +KL KSV FP+ L +
Sbjct: 677 GMTCSKTKKQ--IEAWKQMTLEELPAVLILHLKWFVYKYNGCSKLIKSVEFPIDLKIDNK 734
Query: 486 LLVTPSAEG-----RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGT 539
L +A+ ++Y+L A H G++ +KGHY D + W+ +DD S AI
Sbjct: 735 FLSASTAKKLSPKQKQYKLFAVTYHDGKEATKGHYVTDCFHVGYGTWVRYDDTSAKAISE 794
Query: 540 SKVLH----DQAYVLFYKQV 555
VL Y+L+Y++
Sbjct: 795 GTVLKPVPPRVPYLLYYRRC 814
>gi|296422375|ref|XP_002840736.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636959|emb|CAZ84927.1| unnamed protein product [Tuber melanosporum]
Length = 709
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 197/366 (53%), Gaps = 29/366 (7%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGF 252
++ L PRGL+N+GN+CF+NA LQ L+ C PF L + K P + A + F
Sbjct: 301 TIPFLEPRGLLNTGNMCFMNAVLQMLVFCGPFYYFLDRVAKEAAHSFKNETPLIDAMIMF 360
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS--GRPRQEDAQEF 310
+ +F + ++K++++ L G PF+P V++N S + R Q+DA+EF
Sbjct: 361 MREFHA-TPMTAKQEDLDAL--GEPFAPEFLYEVIRNT-----KSFAHMRRGHQQDAEEF 412
Query: 311 LSFIMDQMHDELLKLQGES-----TSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQ 363
L F++D +H+E +K+ +S +SI+G + SL + DE W VG K K+A TRT
Sbjct: 413 LGFLLDGLHEEAVKMMMKSDGNGPSSISGDS----SLDDTDESGWMEVGHKQKTATTRTT 468
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
S ++ IFGG+L+SV K S T++P+ L LDI + V ++ DAL+ + PE
Sbjct: 469 EISESPITKIFGGKLRSVFHVPALKPSVTLEPYTPLQLDIQAPEVRSVVDALKHLTTPEK 528
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVL 482
++G S G V AKK V I+TL +LILHL RF Y + G T K+ K + +PL L +
Sbjct: 529 IQGDFKSPKGPN--VAAKKQVFIETLPPVLILHLKRFQYDNTGGTQKIWKKIGYPLVLQI 586
Query: 483 GRDLLVTPSAEG--RKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGT 539
+ + G KY L+ V HHG+ S GHYT D R W+ DD + + +
Sbjct: 587 PSEAMSQAQRAGPSAKYRLIGVVYHHGKSASGGHYTVDVLRQDAKNWIRLDDTVIRRVRS 646
Query: 540 SKVLHD 545
+V D
Sbjct: 647 EEVAVD 652
>gi|405971143|gb|EKC35997.1| Ubiquitin carboxyl-terminal hydrolase 10 [Crassostrea gigas]
Length = 895
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 209/386 (54%), Gaps = 39/386 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSD 255
L PRGL+N GN C++NATLQAL+SC PF ++++ + G P + + V FV +
Sbjct: 517 LQPRGLMNRGNWCYINATLQALVSCPPFYNMMKKFPVNAPARKGKSSTPIMDSLVQFVHE 576
Query: 256 FDTPSGGSSK-KKNISVLDIGRPFSP----SMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
F + + + +K ++ L G F P +M + + +N + + +QEDA+EF
Sbjct: 577 FHPCARPTERGRKTLTELVPGAAFEPVNVYNMLQVIEENKSFKLG-------KQEDAEEF 629
Query: 311 LSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE------DEWETVGPKNKSAVTR 361
LS+I+D +H+E L+K + ++NG T VSL E D WE VGPK KS +TR
Sbjct: 630 LSYILDGLHEEMTTLIKFANGTPTVNGLTTDDVSLDESSEDVDPDSWEQVGPKKKSVLTR 689
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F + L++IF G +S + +K SAT+QPF L LDI S+ VH++++A+ +
Sbjct: 690 RANFEKTPLAEIFVGYTRSALYKANSKDSATLQPFFTLQLDIQSDKVHSVKEAMDGLVSR 749
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL 480
E++ G+ S T V + + ++ L +LILHL F Y GS KL K+ + + L
Sbjct: 750 ESVSGFTCSKT--KAEVDVVRHLTLEELPPVLILHLKFFVYDKDGGSQKLLKNFEYGIDL 807
Query: 481 VLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
+ +DLL +P+ R Y+L A V HHG+ + GHYT + + W+ DD+
Sbjct: 808 EITKDLL-SPNVRSKYQLHQRSYKLFAVVYHHGKKATGGHYTTAVFHPAINNWIIIDDSL 866
Query: 534 VTAIGTSKVLHD----QAYVLFYKQV 555
V + VL + Y+L+Y+++
Sbjct: 867 VKHVSVGTVLKNIPGRVPYLLYYRRI 892
>gi|425774704|gb|EKV13005.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum PHI26]
gi|425780801|gb|EKV18799.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum Pd1]
Length = 708
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 194/362 (53%), Gaps = 37/362 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC+PF Q L L R + P + + F+ +F
Sbjct: 255 LEPRGLVNTGNMCYMNSVLQILVSCTPFYQFLDHLGRRAAHTFHSDLPLIDGMIMFMKEF 314
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S+ + + P+ E ++F PD V + PR Q+DA
Sbjct: 315 RVIDSATSEDQ------LRLRLKPNELEQYGESFVPDFVYEMVRQLPRFRDMRRGHQQDA 368
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
QEFL F++++MH+E + + + + ++++ D W VG K K+AVT+ L
Sbjct: 369 QEFLGFLLEEMHEECARAESHTVAKESGDSSV------DGWLEVGHKQKAAVTQLSGSLA 422
Query: 368 --SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
S ++ IFGG+L+S K GNK S T++P+ L LDI S VH I DALR + PE+++
Sbjct: 423 AESPVTRIFGGKLRSEFKVPGNKTSVTLEPYQPLQLDIGSHDVHNILDALRGMTKPESIQ 482
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGST-KLHKSVRFPLQLVLG 483
G SS G +TA K + I+TL +LILHL RF Y S G+T K+ K V +PL L L
Sbjct: 483 GDFNSSRGPN--ITATKQIFIETLPPVLILHLKRFQYDSVTGATQKIWKKVGYPLDLELP 540
Query: 484 RDLL-------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVT 535
R++ + KY L+ + HHG++ S GHYT D R +W+ DD ++
Sbjct: 541 REVFPAHRRNAMASQGGPPKYRLMGVIYHHGKNASGGHYTVDVRRQEGLEWIRMDDTAIR 600
Query: 536 AI 537
+
Sbjct: 601 RV 602
>gi|321457135|gb|EFX68228.1| hypothetical protein DAPPUDRAFT_301522 [Daphnia pulex]
Length = 380
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 208/383 (54%), Gaps = 36/383 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVGFVSD 255
LLPRGLIN N C++NATLQAL++CSPFV L++ L R ++ P + + + F+
Sbjct: 6 LLPRGLINKSNWCYINATLQALIACSPFVHLVKSLERFTGRKHEESTTPIMDSVIEFIDQ 65
Query: 256 FDT------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
F+ S+KK+ G F PS ++ K + + RQEDA+E
Sbjct: 66 FEVIPVRIGKERASAKKEEP---HFGTSFEPS---SIYKMLSKIRSETFKVEGRQEDAEE 119
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVS------LAEEDEWETVGPKNKSAVTRTQ 363
FLS +++ +HDE++ + ++T++ T + + +++++W+ +GPKN+ VT
Sbjct: 120 FLSCLLNGLHDEMIDIV-KATNLPVGKTPVQAGEVKPCTSDDEDWQVIGPKNRGCVTHIT 178
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
++ + +S++F GQ++S + G +++AT+QPF L LDI +E V+++ DAL + E
Sbjct: 179 TYSKTPISNLFLGQMRSALHYAGAQSTATLQPFFSLQLDIQNEKVNSVRDALACLVSKEP 238
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVL 482
L GY +G V A + ++ L ILILHL F Y S G KL K V F L L
Sbjct: 239 LTGYICPKSGQE--VEASRQTTLEELPPILILHLKCFVYDKSGGCQKLMKRVDFSSDLEL 296
Query: 483 GRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVT 535
+D L +P+ + R+Y+L A V H G++ +KGHY + + WL FDD+ V
Sbjct: 297 SKDFL-SPNQKSKLKEKQRQYKLFAVVYHDGKEATKGHYVTEVHHSGTGSWLRFDDSIVR 355
Query: 536 AIGTSKVLHD---QAYVLFYKQV 555
+ T ++ Y+L Y+++
Sbjct: 356 VVETQPFKYNLPRMPYLLLYRKL 378
>gi|67538032|ref|XP_662790.1| hypothetical protein AN5186.2 [Aspergillus nidulans FGSC A4]
gi|40743177|gb|EAA62367.1| hypothetical protein AN5186.2 [Aspergillus nidulans FGSC A4]
gi|259484643|tpe|CBF81041.1| TPA: ubiquitin C-terminal hydrolase, putative (AFU_orthologue;
AFUA_1G07160) [Aspergillus nidulans FGSC A4]
Length = 840
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 196/365 (53%), Gaps = 30/365 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 385 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGKRASHSFHSDFPMVDALIMFMKEF 444
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+++ K + G F P V++ P + G Q+DAQEF
Sbjct: 445 RVIDAARNEEQLRMRLKANELEQYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 501
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEE-DEWETVGPKNKSAVTRTQSFLPS- 368
L F++++MH+E + +TS N + + +E D W VG K K AVTR+ + S
Sbjct: 502 LGFLLEEMHEECAR----ATSANSSTEPASTDSENGDGWLEVGHKQKPAVTRSSGHIASE 557
Query: 369 -ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
++ IFGG+++S + GNKAS T++P+ L LDI + +H I DAL+ + PE+++G
Sbjct: 558 SPITKIFGGKIRSEFRVPGNKASVTLEPYQPLQLDIGAPEIHNIVDALKGLTKPESIQGD 617
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRD 485
SS G VTA K V I++L +LILHL RF Y S G+ K+ K + +PL L + R+
Sbjct: 618 FNSSRGPN--VTATKQVFIESLPPVLILHLKRFQYDSVTHGTQKIWKKIGYPLDLEIPRE 675
Query: 486 LLVTPS-----AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAI 537
+ A+G KY L + HHG++ S GHYT D R + +W+ DD + I
Sbjct: 676 VFPPHRRNVMMAQGGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDTVIRRI 735
Query: 538 GTSKV 542
+ V
Sbjct: 736 KSEDV 740
>gi|358368948|dbj|GAA85564.1| ubiquitin C-terminal hydrolase [Aspergillus kawachii IFO 4308]
Length = 854
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 200/369 (54%), Gaps = 31/369 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 396 LQPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFNSDFPMIDALIMFMREF 455
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+++ K + D G F P V++ P + G Q+DAQEF
Sbjct: 456 RIIDAAHTEEQLKLRLKPNELEDYGEAFVPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 512
Query: 311 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE--DEWETVGPKNKSAVTRTQSF- 365
L F++++MH+E + +T+ AN EE D W VG K K+AVTR+
Sbjct: 513 LGFLLEEMHEECNRAAKDAPATTSASANPEAEVANEESGDGWLEVGHKQKAAVTRSSGHI 572
Query: 366 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
L S ++ IFGG+++S + GNK S T++P+ L LDI + ++ I DAL+ + PE++
Sbjct: 573 ALESPITKIFGGKIRSEFRVPGNKTSVTLEPYQPLQLDIGAPEINNIVDALKGLTKPESI 632
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
+G SS G VTA K + I+T+ +LILHL RF Y S +G+ K+ K V +PL L +
Sbjct: 633 QGDFNSSRGPN--VTATKQIFIETMPPVLILHLKRFQYDSVTRGTQKIWKKVGYPLDLEI 690
Query: 483 GRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
R++ P+ A+G KY LV + HHG++ S GHYT D R + +W+ DD
Sbjct: 691 PREVF-PPNKRNIMMAQGGLPKYRLVGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDTL 749
Query: 534 VTAIGTSKV 542
+ + + V
Sbjct: 750 IRRVRSEDV 758
>gi|145238800|ref|XP_001392047.1| ubiquitin hydrolase [Aspergillus niger CBS 513.88]
gi|134076546|emb|CAK39738.1| unnamed protein product [Aspergillus niger]
gi|350635972|gb|EHA24333.1| ubiquitin-specific protease [Aspergillus niger ATCC 1015]
Length = 854
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 201/369 (54%), Gaps = 31/369 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 396 LQPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFNSDFPMIDALIMFMREF 455
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+++ K + D G F P V++ P + G Q+DAQEF
Sbjct: 456 RIIDAAHTEEQLKLRLKPNELEDYGEAFVPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 512
Query: 311 LSFIMDQMHDELLKLQGES-TSINGANTALVSLAEE---DEWETVGPKNKSAVTRTQSF- 365
L F++++MH+E + ++ + + A +A E D W VG K K+AVTR+
Sbjct: 513 LGFLLEEMHEECNRAAKDAPVTASAAPNPEAEVANEEPGDGWLEVGHKQKAAVTRSSGHI 572
Query: 366 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
L S ++ IFGG+++S + GNK S T++P+ L LDI + ++ I DAL+ + PE++
Sbjct: 573 ALESPITKIFGGKIRSEFRVPGNKTSVTLEPYQPLQLDIGAPEINNIVDALKGLTKPESI 632
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
+G SS G VTA K + I+T+ +LILHL RF Y S +G+ K+ K V +PL L +
Sbjct: 633 QGDFNSSRGPN--VTATKQIFIETMPPVLILHLKRFQYDSVTRGTQKIWKKVGYPLDLEI 690
Query: 483 GRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
R++ P+ A+G KY LV + HHG++ S GHYT D R + +W+ DD
Sbjct: 691 PREVF-PPNKRNIMMAQGGLPKYRLVGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDTL 749
Query: 534 VTAIGTSKV 542
+ + + V
Sbjct: 750 IRRVRSEDV 758
>gi|401883681|gb|EJT47877.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
2479]
Length = 1047
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 211/412 (51%), Gaps = 58/412 (14%)
Query: 192 PVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTA 248
P + ++PRGLIN+GN+CF N LQ L C+PF +L +EL R D+ + P L A
Sbjct: 645 PAGAPAPIVPRGLINTGNMCFANTILQVLRYCTPFTELFEELGKRLKADLARR-TPLLEA 703
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRP----FSP-SMFEAVLKNFTPDVPNSISGRPR 303
V F+ +F G S+ N + G+ F P ++++A+ +N D R
Sbjct: 704 MVVFLREFA--PGPSTNGSNGTSTPKGKARDNAFIPENVYDAMKENKRFDT----MRRGY 757
Query: 304 QEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALVSLA--------EED 346
QEDA+E+L F ++ +H+ELL L +S + NG + + ++D
Sbjct: 758 QEDAEEYLGFFLNTLHEELLDLYSRTAPAKPVAKSAAANGDSERTIDRPVSPTGRRNDDD 817
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
+W VG K K+ V RT S++S IFGG L+SV+ G+K S T++P+ L LDI +
Sbjct: 818 DWLEVGKKQKTHVVRTAETRESSVSRIFGGSLRSVLHTPGSKDSVTLEPYQPLQLDIQAN 877
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
VHT+ DALR + PE + G S+ NA V A K V ++TL +LILHL RF Y Q
Sbjct: 878 EVHTLVDALRHLNEPETVPGV-WSAARNAN-VDATKQVYLETLPPVLILHLKRFVYDPQE 935
Query: 467 S--TKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYT-ADAR 520
K K V + +L + + +++P + +G KY L V HHG + GHYT AR
Sbjct: 936 QNVVKRSKPVAYSTELTIPAE-IISPAKRTPQGIKYRLFGVVYHHGHSATGGHYTVCVAR 994
Query: 521 YFNDQWLHFDDASVTAIGTSKVLHDQ-----------------AYVLFYKQV 555
WLHFDD +V + T V+ + AY+LFY++V
Sbjct: 995 PDGTGWLHFDDETVQPVPTEDVIVSEEEERDGRAGTVAGREKCAYLLFYQRV 1046
>gi|430812378|emb|CCJ30186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 522
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/394 (33%), Positives = 202/394 (51%), Gaps = 42/394 (10%)
Query: 192 PVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAF 249
P K L PRGLIN+GN+CF+N LQ L C PF LL E+ + + + + A
Sbjct: 135 PEKKHYVLQPRGLINTGNVCFMNVILQVLAFCPPFYNLLDEISKKMVNSSVNDVSLINAL 194
Query: 250 VGFVSDFDTPS----GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI---SGRP 302
+ F+ +F + G+S+ K ++ D G PF P ++ N + R
Sbjct: 195 ISFIREFSVITQPVLNGTSQAKKQNIEDFGEPFIPEYVYIAMRG------NKLFDSMRRG 248
Query: 303 RQEDAQEFLSFIMDQMHDELL-KLQGEST--------SINGANTALVSLAEED----EWE 349
QEDA+EFL ++D +H+E L K++ + +N N S +D EW
Sbjct: 249 HQEDAEEFLGLLLDALHEEFLDKMKSDPVISSICTLNRMNCMNFTDFSDHSQDKNDNEWV 308
Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
VGPK K+++ R+ + S L+ IF G +S+++ G K S T++P+ L LDI +
Sbjct: 309 EVGPKQKTSIMRSANVSESPLTPIFTGNFRSILRVSGMKPSITLEPYRSLQLDIEPFHID 368
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST- 468
+IE+AL+ + PE L G SS G + A K V I+TL ++LILHL RF Y + G T
Sbjct: 369 SIEEALQNITQPEVLNGDWHSSLGEK--LKATKQVFIETLPQVLILHLKRFVYDNVGGTQ 426
Query: 469 KLHKSVRFPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
K +K+V +PLQ + ++ +P + K+ L A V HHG S GHYT D R
Sbjct: 427 KSYKNVHYPLQFEIPPTVM-SPHRRFEKNMKFVLFAVVYHHGMSASGGHYTVDLRQDTQS 485
Query: 526 WLHFDDASVTAI-------GTSKVLHDQAYVLFY 552
W+ DD ++ I +S++ + AY+LFY
Sbjct: 486 WIRVDDTHISYILPEHVIPSSSELPNRFAYLLFY 519
>gi|345564452|gb|EGX47415.1| hypothetical protein AOL_s00083g508 [Arthrobotrys oligospora ATCC
24927]
Length = 849
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 204/378 (53%), Gaps = 33/378 (8%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGF 252
V + PRGLIN+GN+CF+N+ LQAL+ C PF L + +R + K P + A + F
Sbjct: 434 VPLMEPRGLINTGNMCFMNSILQALLFCGPFFLFLDAV-SRKVAHNFKNETPLIDAMIMF 492
Query: 253 VSDFDTPSGGSSKKKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQED 306
+ +F + GS + + D+ G PF P ++EAV LK F S R Q+D
Sbjct: 493 MREFRRVTPGSLLSSDSPISDMTLSGDPFVPEYVYEAVKGLKRF------SSMRRGHQQD 546
Query: 307 AQEFLSFIMDQMHDELLKL--QGESTSINGA----NTALVSLAEEDEWETVGPKNKSAVT 360
A+EFL+F +D +H+E + GE + A +TA S ++ W VG K K+ +T
Sbjct: 547 AEEFLNFFLDVLHEECVAAIKSGEGSKQGSAAHPNHTATPSQEDDSGWLEVGHKQKTTIT 606
Query: 361 RTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
R + S ++ IFGGQ+++ ++ G ++S +P+ L LDI + +H+I DALR
Sbjct: 607 RNIGHISGISPVTKIFGGQMRNELRISGQRSSVMREPYQSLQLDIQNSNIHSIVDALRQI 666
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFP 477
S PE L+G S A +A K I +L +LILHL RF Y + G T K+ KS+ +P
Sbjct: 667 SIPEQLQGGDFKSARGAS-ASATKQAFIDSLPPVLILHLKRFQYNNTGGTQKIWKSIGYP 725
Query: 478 LQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 533
L L + + L +P SA+ +Y+L + V HHG+ + GHYT D + D W+ DD
Sbjct: 726 LDLEIPSEAL-SPTRRTSAQPARYKLTSVVYHHGKSATNGHYTVDVKR-QDGWIRIDDTV 783
Query: 534 VTAI-GTSKVLHDQAYVL 550
V I G V+HD Y L
Sbjct: 784 VKRITGNDVVVHDGLYNL 801
>gi|121702365|ref|XP_001269447.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
1]
gi|119397590|gb|EAW08021.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
1]
Length = 870
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 199/370 (53%), Gaps = 32/370 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L P+GL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 400 LEPKGLVNTGNMCYMNSVLQILVSCVPFYQFLDHVGKRATHSVQSEFPVVDAMIMFMREF 459
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S++ K + + G F P V++ P + G Q+DAQEF
Sbjct: 460 RVIDAAHSEEQLRLRLKPNELEEYGEAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 516
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKSAVTRTQSF 365
L F++++MH+E + +++ + A + DE W VG K K+A+TR+
Sbjct: 517 LGFLLEEMHEECARAAKDASLADSATSVSAEPPSVDEQSGDGWLEVGHKQKAAITRSSGH 576
Query: 366 LP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG ++S K GNK S T++P+ L LDI S ++ I DAL+ + PE+
Sbjct: 577 IAQESPITKIFGGNIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDINNIVDALKGLTKPES 636
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K + +PL L
Sbjct: 637 IQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSATRGTQKIWKKIGYPLDLE 694
Query: 482 LGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
+ R++ P+ A+G KY L+ + HHG++ S GHYT D R + +W+ DD
Sbjct: 695 IPREVF-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDT 753
Query: 533 SVTAIGTSKV 542
+ I + V
Sbjct: 754 VIRRIKSEDV 763
>gi|440470881|gb|ELQ39920.1| ubiquitin carboxyl-terminal hydrolase 10 [Magnaporthe oryzae Y34]
gi|440485747|gb|ELQ65671.1| ubiquitin carboxyl-terminal hydrolase 10 [Magnaporthe oryzae P131]
Length = 1024
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
+ PRGLIN+GN+C++N+ LQ L+ C+PF L++ + + P + A + F+ DF
Sbjct: 567 IEPRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDF 626
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 308
S + K+ + G PF+P ++EA+ K +P S R Q+DA+
Sbjct: 627 KIIDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAE 681
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE---------EDEWETVGPKNKSAV 359
EFL F ++ +HDE + + + +TA S A+ +++W VGP+ ++A+
Sbjct: 682 EFLGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAI 741
Query: 360 TRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
TR+ S + S ++ IFGG+L+S ++ G K S T++P+ L LDI + V I DALR
Sbjct: 742 TRSSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRH 801
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
+ PE+L G S G V+A K V I++L +LILHL RF + ++ G+ K+ K V
Sbjct: 802 LTNPESLRGDFNSPRGKD--VSATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKVG 859
Query: 476 FPLQLVLGRDLLVTPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+PL+L + R++L KY+L+A V HHG++ S GHYTAD R + +W+ DD
Sbjct: 860 YPLELEIPREVLSRAKRTAGSLPKYKLIAAVYHHGKNASGGHYTADVRRQDGTEWIRLDD 919
Query: 532 ASVTAIGTSKV 542
+ + + V
Sbjct: 920 TVIRRVRSEDV 930
>gi|389628378|ref|XP_003711842.1| ubiquitin C-terminal hydrolase [Magnaporthe oryzae 70-15]
gi|351644174|gb|EHA52035.1| ubiquitin C-terminal hydrolase [Magnaporthe oryzae 70-15]
Length = 1024
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
+ PRGLIN+GN+C++N+ LQ L+ C+PF L++ + + P + A + F+ DF
Sbjct: 567 IEPRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDF 626
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 308
S + K+ + G PF+P ++EA+ K +P S R Q+DA+
Sbjct: 627 KIIDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAE 681
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE---------EDEWETVGPKNKSAV 359
EFL F ++ +HDE + + + +TA S A+ +++W VGP+ ++A+
Sbjct: 682 EFLGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAI 741
Query: 360 TRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
TR+ S + S ++ IFGG+L+S ++ G K S T++P+ L LDI + V I DALR
Sbjct: 742 TRSSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRH 801
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
+ PE+L G S G V+A K V I++L +LILHL RF + ++ G+ K+ K V
Sbjct: 802 LTNPESLRGDFNSPRGKD--VSATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKVG 859
Query: 476 FPLQLVLGRDLLVTPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+PL+L + R++L KY+L+A V HHG++ S GHYTAD R + +W+ DD
Sbjct: 860 YPLELEIPREVLSRAKRTAGSLPKYKLIAAVYHHGKNASGGHYTADVRRQDGTEWIRLDD 919
Query: 532 ASVTAIGTSKV 542
+ + + V
Sbjct: 920 TVIRRVRSEDV 930
>gi|255948676|ref|XP_002565105.1| Pc22g11580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592122|emb|CAP98446.1| Pc22g11580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 833
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 195/365 (53%), Gaps = 43/365 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC+PF Q L L R + P + A + F+ +F
Sbjct: 380 LEPRGLVNTGNMCYMNSVLQILVSCTPFYQFLDHLGRRAAHTFHSDLPLIDAMIMFMKEF 439
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S+++ + P+ E +F P+ V + PR Q+DA
Sbjct: 440 RVIDAATSEEQ------LRLRLKPNELEQYGDSFVPEFVYEMVRQLPRFRDMRRGHQQDA 493
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
QEFL F++++MH+E + + + + G +++ D W VG K K+AVT+ L
Sbjct: 494 QEFLGFLLEEMHEECARAETHTATKEGGDSSA------DGWLEVGHKQKAAVTQLSGSLA 547
Query: 368 --SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
S ++ IFGG+L+S K GNK S T++P+ L LDI S VH I DAL+ + PE+++
Sbjct: 548 AESPVTRIFGGKLRSEFKVPGNKTSVTLEPYQPLQLDIGSHDVHNILDALKGMTKPESIQ 607
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGST-KLHKSVRFPLQLVLG 483
G SS G +TA K + I+TL +LILHL RF Y S G+T K+ K V +PL L L
Sbjct: 608 GDFNSSRGPN--ITATKQIFIETLPPVLILHLKRFQYDSVTGATQKIWKKVGYPLDLELP 665
Query: 484 RDLLVTPSAEGR----------KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 532
R++ A R KY L+ + HHG++ S GHYT D R +W+ DD
Sbjct: 666 REVF---PAHRRNAMASQGGPPKYRLMGVIYHHGKNASGGHYTVDVRRQEGLEWIRMDDT 722
Query: 533 SVTAI 537
+ +
Sbjct: 723 VIRRV 727
>gi|83770933|dbj|BAE61066.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 966
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 202/396 (51%), Gaps = 61/396 (15%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 479 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 538
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFT------------------- 291
S++ K + G F P V++
Sbjct: 539 RVIDAAHSEEQLRLRLKPNELEQYGDAFIPEFVYQVIRQLPRFRDMRVRSSLLIQPIYAQ 598
Query: 292 -PDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE--- 345
+ PN G Q+DAQEFL F++++MH+E + ST +GA SL+EE
Sbjct: 599 LTNYPNIQRGH--QQDAQEFLGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSA 652
Query: 346 ------DEWETVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFL 397
D W VG K K AVTR+ + S + IFGGQ++S K GNK S T++P+
Sbjct: 653 ADDESGDGWLEVGHKQKPAVTRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQ 712
Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
L LDI S ++ I DAL+ + PE+++G SS G VTA K + I+ L +LILHL
Sbjct: 713 PLQLDIGSPEINNIVDALKGLTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHL 770
Query: 458 MRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHG 507
RF Y S +G+ K+ K V +PL L + R++L P+ A+G KY L+ + HHG
Sbjct: 771 KRFQYDSVTRGTQKIWKKVGYPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHG 829
Query: 508 RDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKV 542
++ S GHYT D R + +W+ DD + + + V
Sbjct: 830 KNASGGHYTVDVRRQDGREWIRLDDTVIRRVRSEDV 865
>gi|388578790|gb|EIM19126.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 444
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 204/392 (52%), Gaps = 45/392 (11%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAFVG 251
KS + L RGLIN GNLCF NA Q+L+ C PF QL +L R++P + P L A +
Sbjct: 68 KSPQLLELRGLINQGNLCFANAIFQSLVFCQPFYQLFIQL-GRELPFSFNKTPLLDATIM 126
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP--RQEDAQE 309
F+++F + L G PF+P+ +K + N S +QEDA+E
Sbjct: 127 FLNEFRVLDDDDIQ------LQTGEPFTPTSIYDAMKTY-----NRFSQIQLGQQEDAEE 175
Query: 310 FLSFIMDQMHDELLKLQGE-----STSINGANTALVSLAE----EDEWETVGPKNKSAVT 360
FL F +D +H+ELL + T+++ L+ + +D W VG KNK+ T
Sbjct: 176 FLGFFLDTLHEELLSISPRLKPRTGTTLHEWFDGLLPTDQPAQADDGWLEVGHKNKTLST 235
Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
++ + S L+ +FGG+ +SV+K G K S T++PF L LDI + +HTIEDAL +
Sbjct: 236 KSTNTQESPLTKMFGGKFRSVLKTPGQKDSITLEPFQPLQLDIQPDNIHTIEDALINLAQ 295
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQ 479
PE + G +SS G V A+K V I T ILI+HL RF Y S G K +K + +
Sbjct: 296 PETIHGVHSSS--KQGPVDARKQVTIDTCPPILIIHLKRFLYDSIGGVLKSNKKIGYKST 353
Query: 480 LVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVT 535
L + + +++PS AEG Y L A V HHG+ GHYT D R + QW+H DD +
Sbjct: 354 LNIPNE-IISPSKRPAEGLNYRLFAVVYHHGQSSGSGHYTIDVLRQNHKQWVHIDDIVMD 412
Query: 536 AIGTSKVL--HDQ----------AYVLFYKQV 555
+ V+ H+ AY+L Y ++
Sbjct: 413 LLDEKDVVITHNSKQNNNYDDKVAYLLLYSKI 444
>gi|402077713|gb|EJT73062.1| ubiquitin C-terminal hydrolase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1010
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 205/379 (54%), Gaps = 42/379 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ L+ C PF L++ + + P + A + F+ DF
Sbjct: 543 LEPRGLINTGNMCYMNSVLQVLIFCIPFYDFLEQAGKKVAHSFNSETPLIDAMIEFLRDF 602
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 308
S + KN + G PF P ++EA+ K +P S R Q+DA+
Sbjct: 603 KIIDSAVSVDQLRRRLKNEELEQYGEPFIPEFVYEAIKK-----LPRFSSMRRGHQQDAE 657
Query: 309 EFLSFIMDQMHDE---LLKLQGESTSINGAN-------TALVSLAEEDE------WETVG 352
EFL F+++ +HDE +L+ S++++ A TA VS A D W VG
Sbjct: 658 EFLGFLLESLHDECAHVLRAVPPSSNVSTAPNSSLPTPTASVSSANLDSGDASNVWLEVG 717
Query: 353 PKNKSAVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
PK +SA+TR+ S S ++ IFGGQL+S ++ G K S T++P+ L LDI + V
Sbjct: 718 PKQRSAITRSSGHSDTSSPITKIFGGQLRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRN 777
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GST 468
I DALR + PE+L G S G VTA K V I++L +LILHL RF + ++ G+
Sbjct: 778 IVDALRHLTNPESLRGDFGSPRGKD--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTV 835
Query: 469 KLHKSVRFPLQLVLGRDLLVTP---SAEGR-KYELVATVTHHGRDPSKGHYTADARYFN- 523
K+ K + +PL+L + R+++ S+ G KY L+A V HHG++ S GHYT D R +
Sbjct: 836 KIWKKIGYPLELEIPREVVSRAKRNSSTGMPKYRLIAAVYHHGKNASGGHYTVDVRRQDG 895
Query: 524 DQWLHFDDASVTAIGTSKV 542
+W+ DD + I V
Sbjct: 896 SEWVRLDDTVIRRIRAEDV 914
>gi|332017167|gb|EGI57966.1| Ubiquitin carboxyl-terminal hydrolase 10 [Acromyrmex echinatior]
Length = 917
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 206/394 (52%), Gaps = 45/394 (11%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 248
K LLPRGL N N C++N+ LQAL++C PF LL L +PK + P +
Sbjct: 523 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLTAL---PLPKNRGRNSATPLIDN 579
Query: 249 FVGFVSDFD-------TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSIS 299
FV +F P K+ +V+DI G F P+ +LK+ + + S
Sbjct: 580 MGKFVREFTPLTEAARMPRKDRVKRGEDTVMDIYSGVAFEPAYVYTMLKHTS-----AFS 634
Query: 300 GRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
RQEDA+EFLS +++ ++DE+L KL + G + + +E+EW+ +GPKNK
Sbjct: 635 VEGRQEDAEEFLSCLLNGINDEMLDVTKLINNDQNAIGNAKNISNDHDEEEWQVMGPKNK 694
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
AVTR F + +SDIF GQL+S V G + + VQPF L LD+ + +++ AL
Sbjct: 695 GAVTRCTEFERTPISDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVKHALE 752
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKLHK 472
+ + +EG S T + A K V ++ L ILILHL F Y S G +K+ K
Sbjct: 753 ILVGKDQVEGLTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKYSNGCSKILK 810
Query: 473 SVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQ 525
++ FP+ L + L +P+ A+ ++Y+L A H G++ +KGHY DA +
Sbjct: 811 TMEFPIDLKIDGKFL-SPNTAKKLGAKQKQYKLFAVTYHDGKEATKGHYFTDAFHVGYGC 869
Query: 526 WLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 555
W+ +DD++V ++ + VL + Y+L+Y++
Sbjct: 870 WVRYDDSTVKSVTENNVLRPTSPRVPYLLYYRRC 903
>gi|427796467|gb|JAA63685.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
[Rhipicephalus pulchellus]
Length = 827
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 151/472 (31%), Positives = 230/472 (48%), Gaps = 49/472 (10%)
Query: 114 IKNSTNGPALSNG---VNHLKADGIDFSSFHQNAGGHANPS-PISKFHVLCDGNIDGRDQ 169
++ S P + NG AD S G P P S+ DG D
Sbjct: 366 VEESAAAPPVVNGSGSATRCWADLFKKGSSEAEGGNKRQPVVPFSR-----DGVTSDCDD 420
Query: 170 NAAACNSSISGSKEVPM-KAINE-PVKSVKDLL-PRGLINSGNLCFLNATLQALMSCSPF 226
C S+ S + + +A+++ V L+ PRGL N N C++NA LQAL++C F
Sbjct: 421 EVRPCRPSVPESVDTRLGRALHKFTVNHTPPLIQPRGLENGKNWCYINANLQALLACPAF 480
Query: 227 VQLLQELR-TRDIPKA-GYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE 284
LL L +P + P + + F+ + P + KK+ V + + + P F
Sbjct: 481 YNLLYSLPLVPGLPGSNATPFMECLIYFLQTYAVPMVRETGKKDELV--VAKAYDPEHFR 538
Query: 285 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSING--------- 334
+L PD + +QEDA+EFLSF+++ +HDE++ ++ S +NG
Sbjct: 539 DLLMKIKPDC-----KKGKQEDAEEFLSFMLNGLHDEMVSSMRSVSNGLNGQCNGEAQPP 593
Query: 335 ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQ 394
A +E W+TV +N+ VTR+ +LPS L DIFGG+++S V A G + SA++Q
Sbjct: 594 VEHADDDDDDEGAWKTVIHRNRHQVTRSAEYLPSPLMDIFGGEMRSSVTADG-ETSASLQ 652
Query: 395 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILI 454
PF L LDI + V T+EDAL +A E ++ Y +S + V A + ++ L ++LI
Sbjct: 653 PFFTLQLDI-QDGVKTVEDALLHLAAEEKVQNYHSSKSNKE--VDALRRTTLEKLPQVLI 709
Query: 455 LHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGR 508
LHL RF Y G KL ++ P QL L R L+ PS+E R Y L A ++H G
Sbjct: 710 LHLKRFVYDKNGGCKKLMNAIHIPHQLQLDRKLV--PSSERWSNKQRCYILFAVLSHSGE 767
Query: 509 DPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQ-----AYVLFYKQ 554
KGHY DA + + W DD +V+ I +L + Y+LFY++
Sbjct: 768 RTDKGHYVTDAFHPAGRTWFRCDDDNVSPIAQGDLLRFENSSLVPYLLFYRR 819
>gi|355757014|gb|EHH60622.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Macaca
fascicularis]
Length = 792
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 213/402 (52%), Gaps = 47/402 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PR LI+ GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRELISKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDE------ 347
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E++E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPRNHSVTEEEQEEQGEESE 571
Query: 348 --WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
WE P+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 572 DEWEQADPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A +++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARASVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + G T D
Sbjct: 689 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGQSTTD 747
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 PFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 789
>gi|224072835|ref|XP_002303904.1| predicted protein [Populus trichocarpa]
gi|222841336|gb|EEE78883.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 151/244 (61%), Gaps = 17/244 (6%)
Query: 1 MSDSK-LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESS 59
MSDSK + VFGSFTE+ET+S L QS G V EKP E EL+FGSLNFGT +
Sbjct: 1 MSDSKKVLVFGSFTEDETKSLLGKQSPGKV---------EKPVEKIELRFGSLNFGTGIT 51
Query: 60 LVGTTDEPNGK-SVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNST 118
N + + +G V Q +L+ K+ VK V D G +G P+ENG I NS
Sbjct: 52 FGNFDTTLNTQLASANGNVTSQSKSLVMKEKDVK-VAKEGD---GVLGSPRENGSIGNSN 107
Query: 119 NGPALSNGVNHLKADGIDFSSFH--QNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNS 176
+G +LSNGV+ LK + ID +S H + G A+P S FHVL I D + +S
Sbjct: 108 HGSSLSNGVDVLKTESIDLTSLHLSEKEDGPASPLQSSSFHVLDSEGIKDGDHDGTTNDS 167
Query: 177 SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 236
SI KE KA + P+ +VK LLPRGLIN+GNLCFLNATLQAL+SCSPFVQLLQELR R
Sbjct: 168 SIHVRKEDVWKANDGPLPAVKSLLPRGLINTGNLCFLNATLQALLSCSPFVQLLQELRIR 227
Query: 237 DIPK 240
DIPK
Sbjct: 228 DIPK 231
>gi|367026027|ref|XP_003662298.1| hypothetical protein MYCTH_2302790 [Myceliophthora thermophila ATCC
42464]
gi|347009566|gb|AEO57053.1| hypothetical protein MYCTH_2302790 [Myceliophthora thermophila ATCC
42464]
Length = 950
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 199/374 (53%), Gaps = 41/374 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF+ L ++ + K+ P L A + F+ +F
Sbjct: 489 LEPRGLVNTGNMCYMNSVLQVLIFCIPFLDFLDQVSKKAAHSFKSETPLLDAMIMFMREF 548
Query: 257 ---DTPSGGSSKKKNISVLD---IGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
D+ + +K + + G PF+P ++ +P S R Q+DAQE
Sbjct: 549 KVIDSATSAEQLRKRLKSEEYEKFGEPFTPEFVYDAIRT----LPRFASMRRGHQQDAQE 604
Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE---------DEWETVGPKNKS 357
FL F+++ +HDE +++ ST+ N++L S D+W VGP+ +S
Sbjct: 605 FLGFLLEGLHDECVQVMRTVPASTASTAPNSSLPSPTSSRANDASEGGDDWLEVGPRQRS 664
Query: 358 AVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
AVTR+ S S ++ IFGGQL+S ++ GNK S T++P+ L LDI S V I DAL
Sbjct: 665 AVTRSSGHSNTLSPITKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEVRNIIDAL 724
Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHK 472
+ + PE L G S G V A K V I+++ +LILHL RF + G G+ K+ K
Sbjct: 725 KGLTRPEVLHGDFNSPHGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWK 782
Query: 473 SVRFPLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN- 523
V +PL+ R++L + ++ +Y L+A V HHG++ S GHYT D R +
Sbjct: 783 KVGYPLEFEFPREVLSRQTRNSILAENSGTPRYRLIAVVYHHGKNASGGHYTVDVRRQDG 842
Query: 524 DQWLHFDDASVTAI 537
+W+ DD + +
Sbjct: 843 REWIRIDDTVIRRV 856
>gi|328786677|ref|XP_001122220.2| PREDICTED: hypothetical protein LOC726488 [Apis mellifera]
Length = 878
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 192/385 (49%), Gaps = 55/385 (14%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVG 251
K LLPRGL N N C++N+ LQAL++C PF LL L P + P + +
Sbjct: 512 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKNPSKMSSTPLIDNMIK 571
Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
FV +F S G+ +K+ V+DI G F P +LKN + S+ GR
Sbjct: 572 FVHEFTPLSDGARLARKDRANKRGEDIVVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 631
Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
QEDA+EFLS +++ ++DE+L E +GPKNK ++TR
Sbjct: 632 --QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKGSITR 664
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 665 CTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEILVGK 722
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
+ LEG S T + A K V ++ L ILILHL F Y G +K+ KSV FP+ L
Sbjct: 723 DQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFPIDLK 780
Query: 482 LGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASV 534
L L +P+A + + Y+L A H G++ +KGHY DA + W+ +DD+S+
Sbjct: 781 LDSKFL-SPNAIKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYDDSSL 839
Query: 535 TAIGTSKVLHDQ----AYVLFYKQV 555
I S VL Y+L+Y++
Sbjct: 840 KGISESNVLKPTPPRVPYLLYYRRC 864
>gi|342882079|gb|EGU82833.1| hypothetical protein FOXB_06636 [Fusarium oxysporum Fo5176]
Length = 930
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 194/369 (52%), Gaps = 37/369 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ LM C PF L ++ R + K+ P + A + F+ +F
Sbjct: 486 LEPRGLINTGNMCYMNSVLQVLMFCLPFYDFLSQISKRAVHSFKSDTPLIDAMIMFMHEF 545
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 308
T + + KN + G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 546 KTIKSAAGIESLRTTLKNEELERYGDPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 600
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT---QSF 365
EFL F++ + DE + ST + A ++W VG K K+AV+R+ SF
Sbjct: 601 EFLGFLLQSLDDECTAVLKNSTLPDQERRASSGSGAGEDWLEVGRKQKAAVSRSSGPNSF 660
Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
P +S IFGG L+S + G K S T +P+ L LDI S V + DALR + PE L+
Sbjct: 661 SP--ISRIFGGSLRSEFRVPGLKDSITTEPYQPLQLDIGSPDVRNVVDALRGLTRPERLQ 718
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 483
G S G VTA K V I TL +LILHL RF + ++ G+ K+ K + +PL+L +
Sbjct: 719 GDFNSPRGKD--VTATKQVFIDTLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 776
Query: 484 RDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
R+ L S + R KY L++ V HHG++ S GHYT D R +W+ DD
Sbjct: 777 REAL---SRQKRQTYGDDGMPKYRLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTV 833
Query: 534 VTAIGTSKV 542
+ + + V
Sbjct: 834 IRRVRSEDV 842
>gi|449684800|ref|XP_002158653.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-A-like, partial
[Hydra magnipapillata]
Length = 382
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 195/377 (51%), Gaps = 22/377 (5%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVG 251
S L RGLIN GN C++N TLQAL++ SP + L+T D+ P + +
Sbjct: 10 SCHHLQLRGLINRGNWCYINTTLQALLAISPISHFYKSLKTFLNTDVSYTSTPLTDSMIA 69
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
F ++F++ + S KK + G F P VL S+S + RQEDA+EFL
Sbjct: 70 FFNEFESINPKISLKKQSEDIKTGASFEPRCIYNVLTTMKA----SLSEKGRQEDAEEFL 125
Query: 312 SFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SFLP 367
S++++ +HDEL+ KL + T N L + ++ W VG K K + S
Sbjct: 126 SYLLNGIHDELVALNKLLSKKTPNGNDNADLDNENDDSSWSQVGTKKKDLAKKVNPSSDS 185
Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
+ + IFGG ++S V+ G K S T+QPF L LDI + + +E A+ + E L+G+
Sbjct: 186 TIIKQIFGGMIRSSVQQSGVKESTTLQPFFTLQLDIQGDEIWCLEKAIESYFVKEILQGF 245
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDL 486
S T V A + + I+ L +LI HL F Y + GS K++K++ P+ L + +D+
Sbjct: 246 TCSKTNTE--VEASRKLSIEELPLVLIFHLKYFVYDRTGGSQKIYKAIDIPVDLEIPKDV 303
Query: 487 L---VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKV 542
L + S R+Y L A + HHG+ + GHYTA + + W++FDD + + ++V
Sbjct: 304 LSPSLKVSLNERQYRLYAVIHHHGKHAAGGHYTASVHHGSPFGWVNFDDNIIKTLNVNQV 363
Query: 543 LHDQA----YVLFYKQV 555
L Q Y+LFY++
Sbjct: 364 LRKQQGSVPYLLFYERC 380
>gi|398388325|ref|XP_003847624.1| hypothetical protein MYCGRDRAFT_77923 [Zymoseptoria tritici IPO323]
gi|339467497|gb|EGP82600.1| hypothetical protein MYCGRDRAFT_77923 [Zymoseptoria tritici IPO323]
Length = 498
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 196/364 (53%), Gaps = 37/364 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI--PKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++R R + K+ P + A + F+ +F
Sbjct: 32 LEPRGLVNTGNMCYMNSILQVLVFCAPFYSFLDQVRQRTVHSMKSDTPLVDAMIMFMREF 91
Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
D S + +K K + G P +P V++ +P S R Q+DA+E
Sbjct: 92 KVLADAESADALRKTLKQDQLEVYGDPVTPEYVYEVIRK----LPRFASMRRGHQQDAEE 147
Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT--QS 364
FL F+++ +HDE +++ Q + NG + +AE W VGPK K++VTRT Q
Sbjct: 148 FLGFLLEGLHDECVHVMQGQMDEPKENGVTSPDTVIAE--GWLEVGPKQKASVTRTAGQQ 205
Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
PS ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I DAL+ + E L
Sbjct: 206 DAPSPVTKIFGGHLRSELRVPGQKDSVTLEPYQPLQLDIGAPHVNNIIDALKGITRTETL 265
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
G G G TAKK V I TL +LILHL RF Y + G+ K+ K V +PL+L +
Sbjct: 266 TG----DFGGKG-STAKKQVFIDTLPPVLILHLKRFQYDNSQTGTQKIWKRVGYPLELEI 320
Query: 483 GRDLLVTPSAEG--------RKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDAS 533
+D+ P+ G +Y L V HHG+ + GHYT D R + +W+ DD
Sbjct: 321 PKDVF-PPAKRGGLAVKGGLPRYRLTGVVYHHGKSAAGGHYTVDVLRQDSREWVRMDDTV 379
Query: 534 VTAI 537
+ I
Sbjct: 380 IRRI 383
>gi|402909222|ref|XP_003917322.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Papio anubis]
Length = 926
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 208/402 (51%), Gaps = 64/402 (15%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 551 IHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 606
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 607 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 662
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 663 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPQNHSVTEEEQEEQGEGSE 722
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L L
Sbjct: 723 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQL---- 778
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 779 -------------VARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 822
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 518
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 823 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 881
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 882 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 923
>gi|242014362|ref|XP_002427860.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512329|gb|EEB15122.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1009
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 199/386 (51%), Gaps = 37/386 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT--AFVGFVSDF 256
L PRGL N N C++NA LQ+L++C PF LL+ L K TL A V + ++F
Sbjct: 623 LQPRGLTNRSNWCYVNAVLQSLIACPPFYNLLKALPVTPNKKGNKQTLIVDALVEYANEF 682
Query: 257 D-----------TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
S + + NI + G F PS +L ++ GR QE
Sbjct: 683 SPIPANARIGKREKSARNKDENNIVEIVTGPAFEPSGIYKILDKVRGGSSFNVEGR--QE 740
Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSIN-------GANTALVSLAEED--EWETVGPKNK 356
DA+EFLS +++ ++DE+ +L + IN A+ +L ++D EW +GPKNK
Sbjct: 741 DAEEFLSCLLNGLNDEMFELM-KMVGINRLDLANGDAHDSLGGNIDDDDSEWNVMGPKNK 799
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
S++TR + +SDIF GQ +S V+ G +++ TVQPF L LDI E ++++DAL
Sbjct: 800 SSITRRAVCGKTPVSDIFRGQFRSRVQRAGEQSTDTVQPFFTLQLDI--EKANSVKDALE 857
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
LF + LEG S T V A ++ L +LILHL + Y S +K+ K+ F
Sbjct: 858 LFMGKDPLEGVTCSKTHQE--VEAWTQTTLEDLPLVLILHLKCYDYKSDACSKIIKNFDF 915
Query: 477 PLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
+ L + LL + + R Y+LVA V H G++ SKGHY DA + WL +DD
Sbjct: 916 QVDLRIDAKLLSNRNKYTGKERNYKLVAVVYHDGKEASKGHYVTDAYHVGYGCWLRYDDV 975
Query: 533 SVTAIGTSKVLHDQA----YVLFYKQ 554
V ++ S VL +A Y+L+Y++
Sbjct: 976 IVRSVPESHVLKPRAPRVPYLLYYRR 1001
>gi|195129379|ref|XP_002009133.1| GI11427 [Drosophila mojavensis]
gi|193920742|gb|EDW19609.1| GI11427 [Drosophila mojavensis]
Length = 849
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 203/389 (52%), Gaps = 48/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 429 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVMSEVKTPTVNAMMS 483
Query: 252 FVSDFDT-PSGGSSKKKNISVLDIGR------------PFSPSMFEAVLKNFTPDVPNSI 298
++S+F + PSG + N + G+ F P+ + K + +
Sbjct: 484 YMSNFSSLPSGTRLRLNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEHV 540
Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE----EDEWETV-GP 353
G RQEDA+EFL +++++++DE+L++ N + E D+W+ +
Sbjct: 541 EG--RQEDAEEFLGYVLNKLNDEMLEIIKLIAKPNAQQNGVEQEQEIEDGGDDWQMICNN 598
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
+NK ++TR F + LSDIF G+L+S ++ +G ++ +QPF L L+I E ++++
Sbjct: 599 RNKGSITRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVKE 656
Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
AL + + LEG S + V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 657 ALEILVGRDQLEGVTGSKSKQE--VVAWQQMTVEKLPIVLILHLKYFDYRSDGCTKILKK 714
Query: 474 VRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARY--FNDQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + +N+ WL +
Sbjct: 715 VEFPVELKIDAKILGSKKTSQKQRTYRLFAVVYHDGKEASKGHYITDVFHTGYNN-WLRY 773
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV IG +VL Y+L+Y++
Sbjct: 774 DDSSVKPIGEKQVLQPHTPRVPYLLYYRR 802
>gi|115388639|ref|XP_001211825.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195909|gb|EAU37609.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 858
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 196/376 (52%), Gaps = 45/376 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ P + A V F+ +F
Sbjct: 396 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDLVGRRASHSFQSEVPLIDAMVMFMKEF 455
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S++ K + G F+P V++ P + G Q+DAQEF
Sbjct: 456 RIIDAAHSEEQLRLRLKPNELEQYGEAFTPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 512
Query: 311 LSFIMDQMHDELLKL------------QGESTSINGANTALVSLAEEDEWETVGPKNKSA 358
L F++++MH+E ++ G+ T+ +G + D W VG K K+A
Sbjct: 513 LGFLLEEMHEECARVAKDAPVKTDDAAPGDETAADGESG--------DGWLEVGHKQKAA 564
Query: 359 VTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
VTR+ L S ++ IFGG+++S + GNK S T +P+ L LDI S VH I DAL+
Sbjct: 565 VTRSSGHIALESPITRIFGGKIRSEFRVPGNKTSVTYEPYQPLQLDIGSPDVHNIVDALK 624
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSV 474
+ PE+++G S G VTA K + I+ L +LILHL RF Y S +G+ K+ K +
Sbjct: 625 GLTKPESIQGDFNSPRGPN--VTATKQLFIEVLPPVLILHLKRFQYDSVTRGTQKIWKKI 682
Query: 475 RFPLQLVLGRDLL------VTPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFN-DQW 526
+PL L L R++ + S G KY L+ + HHG++ S GHYT D R + +W
Sbjct: 683 GYPLDLELPREVFPPNKRNIMMSQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREW 742
Query: 527 LHFDDASVTAIGTSKV 542
+ DD + + + V
Sbjct: 743 IRLDDTVIRRVRSEDV 758
>gi|240273779|gb|EER37298.1| ubiquitin-specific protease [Ajellomyces capsulatus H143]
Length = 739
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 197/371 (53%), Gaps = 34/371 (9%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 262 PRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREFRV 321
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+S + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 322 IDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 378
Query: 313 FIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
F+++++HDE + + ST + + + S + W VG K + A+TR+
Sbjct: 379 FLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRSSG 438
Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ + PE
Sbjct: 439 HISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTKPE 498
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
++G SS G VTA K V I+ L +LILHL RF Y ++G+ K+ K V +PL+L
Sbjct: 499 TIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 556
Query: 481 VLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
L +++ SA+G KY L + HHG++ S GHYT D R + +W+ DD
Sbjct: 557 ELPKEVFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLDD 616
Query: 532 ASVTAIGTSKV 542
S+ + + +V
Sbjct: 617 TSIHRVRSEEV 627
>gi|336472069|gb|EGO60229.1| hypothetical protein NEUTE1DRAFT_119446 [Neurospora tetrasperma
FGSC 2508]
Length = 1079
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 198/374 (52%), Gaps = 38/374 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 617 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 676
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 677 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 730
Query: 308 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
+EFL F+++ +HDE + ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 731 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 790
Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 791 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 850
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 851 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 908
Query: 478 LQLVLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 528
L+L + R+++ T AE KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 909 LELEIPREVVSRQKRNTTHAENADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 968
Query: 529 FDDASVTAIGTSKV 542
DD + + V
Sbjct: 969 IDDTVIRRVRPEDV 982
>gi|336269021|ref|XP_003349272.1| hypothetical protein SMAC_12609 [Sordaria macrospora k-hell]
gi|380089845|emb|CCC12378.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1000
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 38/374 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 539 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 598
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 599 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 652
Query: 308 QEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
+EFL F+++ +HDE +++ ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 653 EEFLGFLLEGLHDECTHVMRTLPVSTTSTAPNSSLPSPTTSNAGDDWLEVGPRQKAAITR 712
Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 713 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 772
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 773 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 830
Query: 478 LQLVLGRDLLV--------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 528
L+L + R+++ +A+ KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 831 LELEIPREVVSRQKRNTIHADNADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 890
Query: 529 FDDASVTAIGTSKV 542
DD + + V
Sbjct: 891 IDDTVIRRVRPEDV 904
>gi|85098196|ref|XP_960580.1| hypothetical protein NCU04333 [Neurospora crassa OR74A]
gi|28922080|gb|EAA31344.1| predicted protein [Neurospora crassa OR74A]
Length = 1104
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 198/374 (52%), Gaps = 38/374 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 642 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 701
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 702 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 755
Query: 308 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
+EFL F+++ +HDE + ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 756 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 815
Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 816 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 875
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 876 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 933
Query: 478 LQLVLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 528
L+L + R+++ T AE KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 934 LELEIPREVVSRQKRNTTHAENADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 993
Query: 529 FDDASVTAIGTSKV 542
DD + + V
Sbjct: 994 IDDTVIRRVRPEDV 1007
>gi|350294724|gb|EGZ75809.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 1165
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 703 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 762
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 763 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 816
Query: 308 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
+EFL F+++ +HDE + ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 817 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 876
Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 877 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 936
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 937 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 994
Query: 478 LQLVLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 528
L+L + R+++ T AE KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 995 LELEIPREVVSRQKRNTTHAENADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 1054
Query: 529 FDDASVTAI 537
DD + +
Sbjct: 1055 IDDTVIRRV 1063
>gi|452987313|gb|EME87069.1| hypothetical protein MYCFIDRAFT_49312 [Pseudocercospora fijiensis
CIRAD86]
Length = 890
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 199/371 (53%), Gaps = 38/371 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF L ++R R + K+G P + A + F+ +F
Sbjct: 423 LEPRGLVNTGNMCYMNSILQVLIFCVPFYNFLDQVRQRTVHSMKSGTPLVDAMIMFMREF 482
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQE 309
+ S K + G P +P V++ +P S R Q+DA+E
Sbjct: 483 KVLASAESVDALRALLKQEQLEQYGDPVTPDYVYEVIRK----LPRFASMRRGHQQDAEE 538
Query: 310 FLSFIMDQMHDELLK-LQGE-----STSINGANTALVSLAEEDEWETVGPKNKSAVTRT- 362
FL F+++ +HDE ++ +QG+ S++ +TA+ S D W VGPK K++VTRT
Sbjct: 539 FLGFLLEGLHDECVQVMQGQPDEQPKQSVSLPDTAM-SPGSADGWLEVGPKQKASVTRTA 597
Query: 363 -QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
Q PS ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I DAL+ +
Sbjct: 598 GQQDAPSPITKIFGGHLRSELRVPGLKDSVTLEPYKPLQLDIGASHVNNIVDALKGITYT 657
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 479
E L G G G TAKK V I +L +L+LHL RF Y + G+ K+ K V +PL+
Sbjct: 658 EALTG----DFGGKG-TTAKKQVFIDSLPPVLVLHLKRFQYDNSFSGTQKIWKKVGYPLE 712
Query: 480 LVLGRDLLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDD 531
L + +++ P+ + K+ L + V HHG+ + GHYT D R + +W+ DD
Sbjct: 713 LQIPKEVF-PPAKRAQLQISGLPKFRLTSVVYHHGKSAAGGHYTVDVLRQDSREWIRMDD 771
Query: 532 ASVTAIGTSKV 542
+ I V
Sbjct: 772 TVIRRIRPEDV 782
>gi|189202394|ref|XP_001937533.1| ubiquitin carboxyl-terminal hydrolase 10 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984632|gb|EDU50120.1| ubiquitin carboxyl-terminal hydrolase 10 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 870
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 185/368 (50%), Gaps = 34/368 (9%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 251
K V L PRGL+N+GNLC++N+ LQ L+ C PF L ++ R + K+ P + A +
Sbjct: 407 KKVSFLEPRGLVNTGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDAMIM 466
Query: 252 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
F+ DF ++ + K + G P +P V+K P N G+ QE
Sbjct: 467 FLRDFKLIDSAATVEQLRLRLKGNDLEQYGEPLTPEYVYDVIKRL-PRFDNMKRGQ--QE 523
Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----EDEWETVGPKNKSAVT 360
DA+EFL F++ +HDE + + A+T E + WE VG K K+AVT
Sbjct: 524 DAEEFLGFLLAGLHDECVHIIKTGKQSQPADTITSPKTERSGSVDGGWEEVGHKQKTAVT 583
Query: 361 RTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
+ + S ++ IFGG+L+S K G KAS T++P+ L LDI + ++ I DAL+
Sbjct: 584 QNSGAIDIESPVTKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEQNINNISDALKNL 643
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
+ E L+G G + K V I+TL +LILHL RF Y +G K+ K + +PL
Sbjct: 644 TRLETLDG------AARGAKASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPL 697
Query: 479 QLVLGRDLLVTPSAEGR--------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
+L L +++ P G +Y L V HHG++ S GHYT D R +W+
Sbjct: 698 ELELPKEVF-PPHKRGSYQVQGGFPRYRLTGVVYHHGKNASGGHYTVDIRRQEGREWIRM 756
Query: 530 DDASVTAI 537
DD + I
Sbjct: 757 DDTMIRRI 764
>gi|400594709|gb|EJP62542.1| ubiquitin carboxyl-terminal hydrolase [Beauveria bassiana ARSEF
2860]
Length = 810
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 195/358 (54%), Gaps = 32/358 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ LM CSPF L ++ R K+ P L A + F+ ++
Sbjct: 361 LEPRGLINTGNMCYMNSVLQVLMFCSPFYDFLDQISKRAAHSFKSETPLLDAMIMFMHEY 420
Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 308
P+ +K + + G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 421 RVLKSAPTNEQLRKSIRGEEIERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 475
Query: 309 EFLSFIMDQMHDELLKLQGESTSI----NGANTALV--SLAEEDEWETVGPKNKSAVTRT 362
EFL F++ + DE + ++ G+ TA S +W VG K ++AVTR+
Sbjct: 476 EFLGFLLQSLDDECTNVMNNASQTASQAAGSETASADGSTDPSGDWLEVGRKQRAAVTRS 535
Query: 363 Q-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
S + ++ +FGG L+S + G K S T +P+ L LDI S + + DALR + P
Sbjct: 536 SGSNTSTPVTKVFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSPEIRNVVDALRGLTRP 595
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL 480
E L+G S G +TA K V I+TL +LILHL RF + ++ G+TK+ K+V +PL L
Sbjct: 596 ERLQGDFNSPRGKD--ITATKQVFIETLPPVLILHLKRFQFDAEGGTTKIWKNVGYPLDL 653
Query: 481 VLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+ R+ L S + KY+L++ + HHG++ S GHYTAD R + +WL DD
Sbjct: 654 EIPREALSRQSRQSLGVGALPKYKLISVIYHHGKNASGGHYTADVRRQDGREWLRLDD 711
>gi|320040494|gb|EFW22427.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str.
Silveira]
Length = 592
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 123 PRGLVNTGNMCYMNSILQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 182
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 183 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 239
Query: 313 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 365
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 240 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 299
Query: 366 LPSA--LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 300 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 359
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 360 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 417
Query: 482 L--------GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 418 IPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDDT 477
Query: 533 SVTAIGTSKV 542
+ + + V
Sbjct: 478 VIRRVRSEDV 487
>gi|154304421|ref|XP_001552615.1| hypothetical protein BC1G_09086 [Botryotinia fuckeliana B05.10]
Length = 880
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P + A + F+ +F
Sbjct: 416 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSQTPLIDAMIMFMREF 475
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 307
S ++ L G E +FTPD + R PR Q+DA
Sbjct: 476 SVIDSAKSVEQLKMRLKDGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 529
Query: 308 QEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE-------------EDEWETVGP 353
+EFL F+++ +HDE + ++ +S N A+T +++ +D W+ VGP
Sbjct: 530 EEFLGFLLEGLHDECVHVMKSSESSKNSADTTPMNVPSSPISDTASRRGSVDDVWQQVGP 589
Query: 354 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
K K+A+TR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI S +H I
Sbjct: 590 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPDIHNI 649
Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 470
DALR + E L G S G VTA K V I+T+ +LILHL RF Y + G T K+
Sbjct: 650 VDALRGLTHSEVLHGDFKSPKGPN--VTATKQVFIETVPPVLILHLKRFQYDNTGGTQKI 707
Query: 471 HKSVRFPLQLVLGRDLL------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN- 523
K V +PL+L L +++ V KY L+ V HHG++ S GHYT D R +
Sbjct: 708 WKKVEYPLELELPKEVFPRTRRSVFAHDGYPKYRLIGVVYHHGKNASGGHYTVDVRRQDG 767
Query: 524 DQWLHFDDASVTAIGTSKV 542
+W+ DD + + + V
Sbjct: 768 KEWIRLDDTVIKRVRSEDV 786
>gi|449302518|gb|EMC98527.1| hypothetical protein BAUCODRAFT_66730 [Baudoinia compniacensis UAMH
10762]
Length = 516
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 192/363 (52%), Gaps = 32/363 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI--PKAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++++ LQ L+ C+PF L ++R R + K+ P + A + F+ DF
Sbjct: 49 LEPRGLVNTGNMCYMSSVLQILLFCTPFYHFLDQVRQRTVHSMKSDTPLVDAMIMFMRDF 108
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+ S + K + G P +P +++ P N G Q+DA+EF
Sbjct: 109 KVLASAESVEALRKTLKQEQLEQFGEPVTPEYVYEAVRDL-PRFQNMRRG--HQQDAEEF 165
Query: 311 LSFIMDQMHDELLKLQGEST--SINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSF- 365
L FI++ +HDE + + ST G + + S + D W VGPK K++VTRT
Sbjct: 166 LGFILECLHDECVTVMRSSTESQTEGVTSPSITASPSSADGWLEVGPKQKASVTRTAGHE 225
Query: 366 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
PS ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I DAL+ + E+L
Sbjct: 226 DAPSPITKIFGGHLRSELRVPGLKDSVTLEPYKPLQLDIGAAHVNNIVDALKGLTRTESL 285
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
G G G + AKK V I T+ +L+LHL RF Y + G+ K+ K + +PL+L +
Sbjct: 286 TG----EFGGRGNI-AKKQVFIDTVPPVLVLHLKRFQYENNLTGTQKIWKKIGYPLELEI 340
Query: 483 GRDLLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASV 534
+++ + G KY L++ V HHG+ + GHYT D R +W+ DD +
Sbjct: 341 PKEVFPSSRRAGLAVKGGLPKYRLISVVYHHGKSAAGGHYTVDVLRQDQREWVRMDDTII 400
Query: 535 TAI 537
I
Sbjct: 401 RRI 403
>gi|396469489|ref|XP_003838418.1| similar to ubiquitin carboxyl-terminal hydrolase 10 [Leptosphaeria
maculans JN3]
gi|312214986|emb|CBX94939.1| similar to ubiquitin carboxyl-terminal hydrolase 10 [Leptosphaeria
maculans JN3]
Length = 881
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 186/372 (50%), Gaps = 32/372 (8%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 251
K V + PRGL+N+GNLC++N+ LQ L+ C+PF L ++ R K+ P + A +
Sbjct: 418 KKVAFIEPRGLVNTGNLCYMNSILQVLLFCAPFYDFLDQVAKRAAHSFKSETPLVDAMIM 477
Query: 252 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
F+ DF +S + K+ + G P +P V+K P N G +QE
Sbjct: 478 FMRDFKLIDSAASVDQLRLRLKDNELEQYGDPLTPEYVYDVIKRL-PRFDNMKRG--QQE 534
Query: 306 DAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNKSAVT 360
DA+EFL F++ +HDE +L Q +S + T + E W VGPK K+AVT
Sbjct: 535 DAEEFLGFLLAGLHDECAQLIKKDRQNQSQEPLASATGEQPGSGESGWHEVGPKQKTAVT 594
Query: 361 RTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
++ + + ++ IFGG+L+S K G K S T++P+ L LDI ++ I DAL+
Sbjct: 595 QSSGTIEFETPITKIFGGKLRSEYKKPGEKPSVTLEPYQPLQLDIGEPHINNISDALKNL 654
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
+ E L+G G + K V I+TL +LILHL RF Y +G K+ K + +PL
Sbjct: 655 TRLETLDG------AARGARASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPL 708
Query: 479 QLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 530
+L L +++ +Y L V HHG++ S GHYT D R +W+ D
Sbjct: 709 ELELPKEVFAQHKRASFQKQGGFPRYRLTGVVYHHGKNASGGHYTVDLRRQEGKEWIRMD 768
Query: 531 DASVTAIGTSKV 542
D + I V
Sbjct: 769 DTIIQRIRAEDV 780
>gi|330922068|ref|XP_003299682.1| hypothetical protein PTT_10730 [Pyrenophora teres f. teres 0-1]
gi|311326539|gb|EFQ92222.1| hypothetical protein PTT_10730 [Pyrenophora teres f. teres 0-1]
Length = 887
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 184/363 (50%), Gaps = 34/363 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
+ PRGL+N+GNLC++N+ LQ L+ C PF L ++ R + K+ P + A + F+ DF
Sbjct: 429 IEPRGLVNTGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDAMIMFLRDF 488
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
++ + K + G P +P V+K P N G+ QEDA+EF
Sbjct: 489 KLIDSAATVEQLRLRLKGNDLEQYGEPLTPEYVYDVIKRL-PRFDNMKRGQ--QEDAEEF 545
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----EDEWETVGPKNKSAVTRTQSF 365
L F++ +HDE +++ A+T E + WE VG K K+AVT+
Sbjct: 546 LGFLLAGLHDECVQIIKTGKQSQSADTVTSPKTERSGSVDGGWEEVGHKQKTAVTQNSGA 605
Query: 366 L--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG+L+S K G KAS T++P+ L LDI + ++ I DAL+ + E
Sbjct: 606 IDIESPVTKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEQNINNISDALKNLTRLET 665
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
L+G G + K V I+TL +LILHL RF Y +G K+ K + +PL+L L
Sbjct: 666 LDG------AARGAKASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPLELELP 719
Query: 484 RDLLVTPSAEGR--------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASV 534
+++ P G +Y L V HHG++ S GHYT D R +W+ DD +
Sbjct: 720 KEVF-PPHKRGSYQVQGGFPRYRLTGVVYHHGKNASGGHYTVDIRRQEGKEWIRMDDTMI 778
Query: 535 TAI 537
I
Sbjct: 779 RRI 781
>gi|451851979|gb|EMD65274.1| hypothetical protein COCSADRAFT_87496 [Cochliobolus sativus ND90Pr]
Length = 882
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 198/418 (47%), Gaps = 61/418 (14%)
Query: 167 RDQNAAACNSSISGSKEVPMKAINEPV-------------------KSVKDLLPRGLINS 207
R +NA I+ P N PV K V + PRGL+NS
Sbjct: 373 RAKNATKAAQPIAPPATTPAPVTNGPVVQKSNTLADVLASFSVDSEKKVSFIEPRGLVNS 432
Query: 208 GNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDTPSGGSS- 264
GNLC++N+ LQ L+ C PF L ++ R + K+ P + A + F+ DF ++
Sbjct: 433 GNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLIDAMIMFLRDFKLIDSAATV 492
Query: 265 -----KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ K+ + G P +P V+K P N G +QEDA+EFL F++ +H
Sbjct: 493 EQLRLRLKSNDIEQYGDPLAPEYVYDVIKRL-PRFDNMKRG--QQEDAEEFLGFLLAGLH 549
Query: 320 DELLKL---------QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF--LPS 368
DE +++ G TS N T V + WE VG K ++AVT+ + S
Sbjct: 550 DECVQIIKSGKQSQPAGAVTSENSEQTGSV----DGGWEEVGHKQRTAVTQNSGAIDIES 605
Query: 369 ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
++ IFGG+L+S K G KAS T++P+ L LDI ++ I DAL+ + E L+G
Sbjct: 606 PITKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEPNINNISDALKNLTRLETLDG-- 663
Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLV 488
G + K V I++L +LILHL RF Y +G K+ K + +PL+L L +++
Sbjct: 664 ----AARGAKASTKQVHIESLPPVLILHLKRFHYDEKGPQKIWKKIGYPLELELPKEVF- 718
Query: 489 TPSAEGR--------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAI 537
P G +Y L V HHG++ S GHYT D R +W+ DD + I
Sbjct: 719 PPHKRGSYQVQGGFPRYRLTGVVYHHGKNASGGHYTVDLRRQEGKEWIRMDDTIIRRI 776
>gi|325094789|gb|EGC48099.1| ubiquitin-specific protease [Ajellomyces capsulatus H88]
Length = 924
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 34/373 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
+ PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 445 IEPRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREF 504
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+S + K + G F P V+++ P + G Q+DAQEF
Sbjct: 505 RVIDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 561
Query: 311 LSFIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
L F+++++HDE + + ST + + + S + W VG K + A+TR+
Sbjct: 562 LGFLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRS 621
Query: 363 QSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ +
Sbjct: 622 SGHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTK 681
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
PE ++G SS G VTA K V I+ L +LILHL RF Y ++G+ K+ K V +PL
Sbjct: 682 PETIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPL 739
Query: 479 QLVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
+L L +++ SA+G KY L + HHG++ S GHYT D R + +W+
Sbjct: 740 ELELPKEVFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRL 799
Query: 530 DDASVTAIGTSKV 542
DD S+ + + +V
Sbjct: 800 DDTSIHRVRSEEV 812
>gi|225555478|gb|EEH03770.1| ubiquitin-specific protease [Ajellomyces capsulatus G186AR]
Length = 947
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 197/371 (53%), Gaps = 34/371 (9%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 470 PRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREFRV 529
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+S + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 530 IDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 586
Query: 313 FIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
F+++++HDE + + ST + + + S + W VG K + A+TR+
Sbjct: 587 FLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRSSG 646
Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ + PE
Sbjct: 647 HISVESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTKPE 706
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
++G SS G VTA K V I+ L +LILHL RF Y ++G+ K+ K V +PL+L
Sbjct: 707 TIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 764
Query: 481 VLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
L +++ SA+G KY L + HHG++ S GHYT D R + +W+ DD
Sbjct: 765 ELPKEVFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLDD 824
Query: 532 ASVTAIGTSKV 542
S+ + + +V
Sbjct: 825 TSIHRVRSEEV 835
>gi|383863085|ref|XP_003707013.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Megachile
rotundata]
Length = 880
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 195/385 (50%), Gaps = 55/385 (14%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 251
K LLPRGL N N C++N+ LQAL++C PF LL L ++ + K + P + +
Sbjct: 514 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKSLSKMSSTPLIDNMIK 573
Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
FV +F S + +K+ +++DI G F PS +LKN + S+ GR
Sbjct: 574 FVHEFTPLSDAARLARKDRANKRGEDTIVDIQSGVAFEPSYVYTMLKNTSAAGVFSVEGR 633
Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
QEDA+EFLS +++ ++DE+L E +GPKNK ++TR
Sbjct: 634 --QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKGSITR 666
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 667 CTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEILVGK 724
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
+ LEG S T + A K V ++ L ILILHL F Y +K+ KSV FP+ L
Sbjct: 725 DQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDVCSKIVKSVEFPVDLK 782
Query: 482 LGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASV 534
L L +P+A + + Y+L A H G++ +KGHY DA + W+ +DD+S+
Sbjct: 783 LDSKFL-SPNAVKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYDDSSL 841
Query: 535 TAIGTSKVLHDQ----AYVLFYKQV 555
+ S VL Y+L+Y++
Sbjct: 842 KGVSESNVLKPTPPRVPYLLYYRRC 866
>gi|327352557|gb|EGE81414.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ATCC
18188]
Length = 932
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 203/371 (54%), Gaps = 34/371 (9%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 455 PRGLLNTGNMCYMNSILQILVFCVPFYEFLDKIGRRAVHSFKSDLPLIDAMIMFMREFRV 514
Query: 259 PSGGSSKKK-----NISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+S +K + L++ G F P V+++ P + G Q+DAQEFL
Sbjct: 515 IDAATSVEKLRLRLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 571
Query: 313 FIMDQMHDELLKLQGESTS----INGANTA-LVSLAEE---DEWETVGPKNKSAVTRTQS 364
F+++++HDE + ++TS I+ A A VS E + W VG K K A+TR+
Sbjct: 572 FLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPAITRSSG 631
Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 632 HISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 691
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
++G SS G VTA K V I++L +LILHL RF Y ++G+ K+ K V +PL+L
Sbjct: 692 TMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 749
Query: 481 VLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
L ++ SA+G KY L + HHG++ S GHYT D R + +W+ DD
Sbjct: 750 ELPKEAFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLDD 809
Query: 532 ASVTAIGTSKV 542
+ + + V
Sbjct: 810 TVIRRVRSEDV 820
>gi|367039059|ref|XP_003649910.1| hypothetical protein THITE_2109034 [Thielavia terrestris NRRL 8126]
gi|346997171|gb|AEO63574.1| hypothetical protein THITE_2109034 [Thielavia terrestris NRRL 8126]
Length = 958
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 194/374 (51%), Gaps = 41/374 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF L ++ K+ P + A V F+ +F
Sbjct: 497 LEPRGLVNTGNMCYMNSVLQVLIFCIPFYDFLDQVNKNAAHSFKSETPLVDAMVMFMREF 556
Query: 257 ---DTPSGGSSKKKNISVLDI---GRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
D+ + KK + D G PF+P ++ +P S R Q+DAQE
Sbjct: 557 KVIDSAPSVAQLKKRLKSEDYEKYGEPFTPEFVYDAIRT----LPRFASMRRGHQQDAQE 612
Query: 310 FLSFIMDQMHDELLKLQ------------GESTSINGANTALVSLAEEDEWETVGPKNKS 357
FL F+++ +HDE ++ S ++ A L D+W VGP+ +S
Sbjct: 613 FLGFLLEGLHDECAQVMRAAPASTASTAPSSSLPSPTSSRANDPLEGGDDWLEVGPRQRS 672
Query: 358 AVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
AVTR+ S PS ++ IFGGQL+S ++ GNK S T++P+ L LDI S + I DAL
Sbjct: 673 AVTRSSGHSHTPSPVTKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEIRNIIDAL 732
Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHK 472
+ + PE L G S G V A K V I+++ +LILHL RF + G G+ K+ K
Sbjct: 733 KGLTRPEVLHGDFNSPHGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWK 790
Query: 473 SVRFPLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN- 523
V +PL+ R++L + ++ +Y L+A V HHG++ S GHYT D R +
Sbjct: 791 KVGYPLEFEFPREVLSRQTRNNILAENSGPPRYRLIAVVYHHGKNASGGHYTVDVRRQDG 850
Query: 524 DQWLHFDDASVTAI 537
+W+ DD + +
Sbjct: 851 REWIRIDDTVIRRV 864
>gi|340914994|gb|EGS18335.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1016
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 202/375 (53%), Gaps = 39/375 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P L + F+ +F
Sbjct: 554 LEPRGLVNTGNMCYMNSVLQVLLFCTPFYDFLDQVSKKAAHSFKSETPLLDTMIMFMREF 613
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+ S+ + + + P +E FTP+ V ++I PR Q+DA
Sbjct: 614 KAIASASTAEL------LRKRLRPEEYEKYGDPFTPEFVYDTIRKLPRFSSMRRGHQQDA 667
Query: 308 QEFLSFIMDQMHDELLKLQGE-----STSINGANTALVSLAEE-DEWETVGPKNKSAVTR 361
QEFL F+++ +HDE ++ ST+ N + ++ + AE ++W VGP+ +SA+TR
Sbjct: 668 QEFLGFLLEGLHDECSQVTRNVQSTVSTTANSSVSSPTAAAEGGNDWLEVGPRQRSAITR 727
Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
+ + S ++ IFGGQL+S ++ GNK S T++P+ L LDI + V TI DAL+ +
Sbjct: 728 SSGYSQSSSPITKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGAPEVRTIIDALKGLT 787
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHKSVRF 476
PE + G S G V A K V I+++ +LILHL RF + G G+ K+ K V +
Sbjct: 788 HPEAIYGDFNSPRGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWKKVGY 845
Query: 477 PLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
PL+ R++L + + +Y L+A V HHG++ S GHYT D R + +W+
Sbjct: 846 PLEFDFPREVLSRSTRNSILNDNTGAPRYRLIAVVYHHGKNASGGHYTVDVRRQDGKEWI 905
Query: 528 HFDDASVTAIGTSKV 542
DD + + +V
Sbjct: 906 RIDDTVIRRVRDEEV 920
>gi|195378014|ref|XP_002047782.1| GJ13624 [Drosophila virilis]
gi|194154940|gb|EDW70124.1| GJ13624 [Drosophila virilis]
Length = 1601
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 200/389 (51%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1184 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1238
Query: 252 FVSDFDTPSGGSSKKKNISV--------------LDIGRPFSPSMFEAVLKNFTPDVPNS 297
F+S+F + GG+ + N + L F P+ + K +
Sbjct: 1239 FMSNFSSLPGGTRLRLNNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEH 1295
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L+ + + NG + D W+ +
Sbjct: 1296 VEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPNAQQNGEEQEQDTEDGGDVWQMICN 1353
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + LSDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1354 NRNKGSVTRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1411
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1412 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPIVLILHLKYFDYRSDGCTKILK 1469
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + + WL +
Sbjct: 1470 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNSWLRY 1529
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV IG +VL Y+L+Y++
Sbjct: 1530 DDSSVKPIGEKQVLQPHTPRVPYLLYYRR 1558
>gi|406867893|gb|EKD20930.1| putative ubiquitin carboxyl-terminal hydrolase 10 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 852
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 202/382 (52%), Gaps = 47/382 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ R K+ P + A + F+ +F
Sbjct: 396 LKPRGLVNTGNMCYMNSVLQVLIFCTPFFSFLDQVSKRAAHNFKSETPLIDAMILFLQEF 455
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S + K + G PF+P V+ N P S R Q+DA+EF
Sbjct: 456 PVIDSAKSVEQLKMRLKEGDLEQYGDPFTPDFVYNVI-NRLPRF--SSMRRGHQQDAEEF 512
Query: 311 LSFIMDQMHDE-LLKLQGESTSIN----------------GANTALVSLAEEDEWETVGP 353
L F+++ +HDE +L ++ S++ N G+ VS A+E+ W VGP
Sbjct: 513 LGFLLEGLHDECVLAMRNGSSNTNSAIATPNGPSSPVSETGSTQGSVS-AKENGWLEVGP 571
Query: 354 KNKSAVTRTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
K K+AVTR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I
Sbjct: 572 KQKAAVTRSSGTISTGSPVTKIFGGNLRSELRVPGLKDSVTLEPYQPLQLDIGAPNVNNI 631
Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 470
DAL+ + E L G S G VTA K V I+TL +LILHL RF Y + G T K+
Sbjct: 632 VDALKGLTRSEVLHGDFKSPKGPN--VTATKQVFIETLPPVLILHLKRFQYDNAGGTQKI 689
Query: 471 HKSVRFPLQLVLGRDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARY 521
K V +PL+L + +++ S + R KY L+A V HHG++ + GHYT D R
Sbjct: 690 WKKVGYPLELEIPKEVF---SRQKRAAYAHSGLPKYRLIAAVYHHGKNATGGHYTVDVRR 746
Query: 522 FN-DQWLHFDDASVTAIGTSKV 542
+ +W+ DD + + + +V
Sbjct: 747 QDGREWVRLDDTVIRRVRSEEV 768
>gi|392862091|gb|EAS37301.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
Length = 892
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 423 PRGLVNTGNMCYMNSVLQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 482
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 483 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 539
Query: 313 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 365
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 540 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 599
Query: 366 LPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 600 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 659
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 660 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 717
Query: 482 LG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 718 IPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDDT 777
Query: 533 SVTAIGTSKV 542
+ + + V
Sbjct: 778 VIRRVRSEDV 787
>gi|171694367|ref|XP_001912108.1| hypothetical protein [Podospora anserina S mat+]
gi|170947132|emb|CAP73937.1| unnamed protein product [Podospora anserina S mat+]
Length = 1020
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 197/378 (52%), Gaps = 42/378 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
+ PRGL+N+GN+C++N+ LQ L+ C PF L ++ + K+ P + A + F+ +F
Sbjct: 565 IEPRGLVNTGNMCYMNSVLQVLIFCIPFYDFLDQVSKKATHSFKSETPLIDALIMFMREF 624
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
+S + R P E ++FTP+ V +I PR Q+DA
Sbjct: 625 KIIDSATSTDL------LQRRLKPEELEQYGESFTPEFVYEAIRKLPRFASMRRGHQQDA 678
Query: 308 QEFLSFIMDQMHDELLKLQ------GESTSINGANTALV------SLAEEDEWETVGPKN 355
QEFL F+++ +HDE ++ ST+ N ++ SL D+W VGP+
Sbjct: 679 QEFLGFLLEGLHDECAQVMRTAPVSAVSTAPNSTPSSPTTSKPNGSLEGADDWLEVGPRQ 738
Query: 356 KSAVTRTQSF-LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
++AVTR+ L S ++ IFGG+L+S ++ GNK S T++P+ L LDI + + I DA
Sbjct: 739 RAAVTRSSGHSLASPINKIFGGKLRSELRVPGNKTSVTLEPYEPLQLDIGAPEIRNIIDA 798
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLH 471
L+ + PE L G S G V A K + I+++ +LILHL RF + G G+ K+
Sbjct: 799 LKGLTRPETLHGDFNSPHGKN--VKATKQIFIESVPPVLILHLKRFQFDAEGQGGTVKIW 856
Query: 472 KSVRFPL-----QLVLGRDLLVTPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFN-D 524
K + +PL Q VL R + EG +Y+L A V HHG++ S GHYT D R +
Sbjct: 857 KKIGYPLEFEFPQEVLSRSQRNSTVHEGVPRYKLTAVVYHHGKNASGGHYTVDVRRQDGR 916
Query: 525 QWLHFDDASVTAIGTSKV 542
+W+ DD + + + V
Sbjct: 917 EWIRIDDTVIRRVRSEDV 934
>gi|406702466|gb|EKD05482.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
8904]
Length = 1075
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 211/425 (49%), Gaps = 71/425 (16%)
Query: 192 PVKSVKDLLPRGLINSGNLCFLNAT-------------LQALMSCSPFVQLLQELRTR-- 236
P + ++PRGLIN+GN+CF N LQ L C+PF +L +EL R
Sbjct: 660 PAGAPAPIVPRGLINTGNMCFANTVGYFCLSCANPPQILQVLRYCTPFTELFEELGKRLK 719
Query: 237 -DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP----FSP-SMFEAVLKNF 290
D+ + P L A V F+ +F G S+ N + G+ F P ++++A+ +N
Sbjct: 720 ADLARR-TPLLEAMVVFLREFA--PGPSTNGSNGTSTPKGKARDNAFIPENVYDAMKENK 776
Query: 291 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALVS 341
D R QEDA+E+L F ++ +H+ELL L +S + NG + +
Sbjct: 777 RFDT----MRRGYQEDAEEYLGFFLNTLHEELLDLYSRTAPAKPVAKSAAANGDSERTID 832
Query: 342 LA--------EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV 393
++D+W VG K K+ V RT S++S IFGG L+SV+ G+K S T+
Sbjct: 833 RPVSPKGRRNDDDDWLEVGKKQKTHVVRTAETRESSVSRIFGGSLRSVLHTPGSKDSVTL 892
Query: 394 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
+P+ L LDI + VHT+ DALR + PE + G S+ NA V A K V ++TL +L
Sbjct: 893 EPYQPLQLDIQANEVHTLVDALRHLNEPETVPGV-WSAARNAN-VDATKQVYLETLPPVL 950
Query: 454 ILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGR 508
ILHL RF Y Q K K V + +L + + +++P + +G KY L V HHG
Sbjct: 951 ILHLKRFVYDPQEQNVVKRSKPVAYSTELTIPAE-IISPAKRTPQGIKYRLFGVVYHHGH 1009
Query: 509 DPSKGHYT-ADARYFNDQWLHFDDASVTAIGTSKVLHDQ-----------------AYVL 550
+ GHYT AR WLHFDD +V + T V+ + AY+L
Sbjct: 1010 SATGGHYTVCVARPDGTGWLHFDDETVQPVPTEDVIVSEEEERDGRAGTVAGREKCAYLL 1069
Query: 551 FYKQV 555
FY++V
Sbjct: 1070 FYQRV 1074
>gi|453080075|gb|EMF08127.1| cysteine proteinase [Mycosphaerella populorum SO2202]
Length = 920
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 193/369 (52%), Gaps = 33/369 (8%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF L ++ R + K+ P + A + F+ +F
Sbjct: 452 LEPRGLVNTGNMCYMNSILQVLVFCVPFYNFLDQVAKRTVHSMKSDTPLVDAMIMFMKEF 511
Query: 257 DTPSGGSSKKKNISVL------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+ +S S+L G +P V++N + N G Q+DA+EF
Sbjct: 512 KPLATAASADAVRSLLKQEQLEQYGDSVTPDYVYEVIRNLS-RFANMRRG--HQQDAEEF 568
Query: 311 LSFIMDQMHDELLKLQ----GESTSINGANT--ALVSLAEEDEWETVGPKNKSAVTRT-- 362
L F+++++HDE +K+ + NGA + ++S + D W VGPK KS +TRT
Sbjct: 569 LGFLLEELHDECVKVMLGQTEQQPQTNGAASPETVLSPSSADGWLEVGPKQKSVITRTTG 628
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
Q + S ++ IF GQ ++ + G K S T++P+ L LDI E V I DAL+ + E
Sbjct: 629 QQDIASPITRIFAGQTRAEFRVPGQKDSVTLEPYKPLQLDIGGEHVSNIVDALKGLTNTE 688
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 480
L G GN TAKK + I+TL +LILHL RF Y S + + K+ K V +PL+L
Sbjct: 689 TLTG-EFGGRGN----TAKKQMFIETLPPVLILHLKRFEYNSSTKATQKIWKKVGYPLEL 743
Query: 481 VLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDAS 533
+ +++ G KY L + V HHG+ + GHYT D R + +W+ DD
Sbjct: 744 QIPKEVFSPAKRAGLQISGLPKYRLTSVVYHHGKSAAGGHYTVDVLRQDSREWIRMDDTI 803
Query: 534 VTAIGTSKV 542
+ I + V
Sbjct: 804 IRRIRSEDV 812
>gi|303321950|ref|XP_003070969.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110666|gb|EER28824.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 892
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 423 PRGLVNTGNMCYMNSILQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 482
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 483 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 539
Query: 313 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 365
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 540 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 599
Query: 366 LPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 600 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 659
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 660 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 717
Query: 482 LG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 718 IPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDDT 777
Query: 533 SVTAIGTSKV 542
+ + + V
Sbjct: 778 VIRRVRSEDV 787
>gi|195019971|ref|XP_001985094.1| GH16868 [Drosophila grimshawi]
gi|193898576|gb|EDV97442.1| GH16868 [Drosophila grimshawi]
Length = 1668
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 199/389 (51%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1252 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVMSEVKTPTVNAMMS 1306
Query: 252 FVSDFDTPSGGS----SKKKNISV----------LDIGRPFSPSMFEAVLKNFTPDVPNS 297
F+S+F + GG+ S K + L F P+ + K +
Sbjct: 1307 FMSNFSSLPGGTRLRFSNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEH 1363
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L+ + + NG D W+ +
Sbjct: 1364 VEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPNARQNGEEQEQEPEDGGDVWQMICN 1421
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + LSDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1422 NRNKGSVTRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1479
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1480 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1537
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + + WL +
Sbjct: 1538 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNSWLRY 1597
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV IG +VL Y+L+Y++
Sbjct: 1598 DDSSVKPIGEKQVLQPHTPRVPYLLYYRR 1626
>gi|392580194|gb|EIW73321.1| hypothetical protein TREMEDRAFT_73044 [Tremella mesenterica DSM 1558]
Length = 1120
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 205/409 (50%), Gaps = 61/409 (14%)
Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--PTLTAFVGFVSDFD 257
LPRGLIN+GN+CF N LQ L+ C PF QLL+EL R G P L A + F+ +F+
Sbjct: 719 LPRGLINTGNMCFANTILQVLVFCLPFTQLLEELGKRLKADLGRQTPLLEAMIVFLREFN 778
Query: 258 TP---SGGSSKKKNISVLDIGR-----------PFSPS-MFEAVLKNFTPDVPNSISGRP 302
P G + ++ ++++ + F P ++EA+ N D +
Sbjct: 779 LPDPVPGAAPSQQRNALINGSKHSRRDKDHRSTAFIPEHVYEAMKANKRFD----FVQKG 834
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTAL------------VSLAEEDE--W 348
QEDA+EF F+ D +H+E+LKL S++ ++ L VS ED W
Sbjct: 835 HQEDAEEFFGFLNDTLHEEILKLVSRSSNRKISSGQLPNGDTDKHIRRPVSPGAEDSSGW 894
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAV 408
VG K + R+ SA+S +FGG L+SV++ GNK S T++PF L LDI S+ V
Sbjct: 895 LEVGKKQRVHQVRSVESHESAISRLFGGTLRSVLRVPGNKDSVTLEPFKTLALDIRSD-V 953
Query: 409 HTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQG 466
TIEDALR + PE + G + S V A K V I+T +L+LHL RF Y Q
Sbjct: 954 TTIEDALRHIAEPEIVPGVYSPSRKEK--VDASKQVTIETFPPVLVLHLKRFEYDQVEQR 1011
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGR--KYELVATVTHHGRDPSKGHYT-ADARYFN 523
K K V + +L++ + +V+P+ G KY L HHG GHYT A AR
Sbjct: 1012 VFKRDKPVAYGTELIIPSE-VVSPTKRGHPVKYRLFGVDYHHGASSQGGHYTLAAARQDG 1070
Query: 524 DQWLHFDDASVTAIGTSKVLHDQ-----------------AYVLFYKQV 555
W+HFDD + +A+ T V+ + AY+LFY++V
Sbjct: 1071 SGWIHFDDETHSAVPTEAVVVSESEAVSGRAGLIGGREKCAYLLFYQRV 1119
>gi|346970069|gb|EGY13521.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
VdLs.17]
Length = 927
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 195/372 (52%), Gaps = 31/372 (8%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFV 250
+ VK + PRGL+N GN+C++N+ LQ L+ C PF L ++ + +P K+ P L A +
Sbjct: 477 EKVKYVEPRGLVNIGNMCYMNSVLQVLLFCVPFYDFLDQI-SEKVPLSFKSQTPILDAMI 535
Query: 251 GFVSDFDTPSGGSSKKK------NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 304
F+ +F + G S K N + G F+P E + + PD R Q
Sbjct: 536 LFMREFQVINSGDSAAKLRKLLKNEELEQYGTSFTP---EFIYQAIEPDKRFENMRRGHQ 592
Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL---AEEDEWETVGPKNKSAVTR 361
+DA+EF ++ + DE K+ G ++ N + A S A D W VG K ++AVTR
Sbjct: 593 QDAEEFFGLLLQSLDDECAKVMGVASG-NAPHPAPASANADATADGWLEVGAKQRAAVTR 651
Query: 362 TQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
+ S ++ IFGG L+S ++ G + S T +P+ L LDI + V + DAL+ +A
Sbjct: 652 SSGASSSTPITQIFGGLLRSELRVTGKQDSITTEPYQALQLDIGANDVRNVVDALKRLTA 711
Query: 421 PENLE--GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFP 477
E LE G+ + NA VV K I TL +LILHL RF + ++ G+TK+ K V +P
Sbjct: 712 HEKLEGSGFNSPHGKNATVV---KQTLIDTLPPVLILHLKRFHFDAEGGTTKIWKKVGYP 768
Query: 478 LQL-----VLGRDLLVT-PSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFD 530
L+L L R + EG KY+L+A V HHG+ + GHYTAD R ++ +W+ D
Sbjct: 769 LELEIPVQALARQWRASNKGGEGPKYKLIAVVYHHGKHANGGHYTADVRRQDEHEWIRLD 828
Query: 531 DASVTAIGTSKV 542
D + + + V
Sbjct: 829 DTVIRRVRSEDV 840
>gi|158296242|ref|XP_316682.4| AGAP006652-PA [Anopheles gambiae str. PEST]
gi|157016417|gb|EAA11019.5| AGAP006652-PA [Anopheles gambiae str. PEST]
Length = 2169
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 197/391 (50%), Gaps = 43/391 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 253
++PRGLIN N C++N LQAL++C PF L++ +RT +P A P + A
Sbjct: 1685 MMPRGLINRSNYCYINTILQALIACPPFYHLMRTIRT--LPAAKNSKHPKPFIDAMCALA 1742
Query: 254 SDFDT------PSGGSSKKKN-------ISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 300
++F P + I + + PF P++ +L D+ I G
Sbjct: 1743 NEFSQLPIRSKPQQQQQRGGGDKGKKDDIPEIQVDTPFEPTVIYKMLNGIRSDI-FQIEG 1801
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANTALVSLAEEDEWETVGP 353
R QEDA+EFL ++++++DE+++ QG N + + D+W +
Sbjct: 1802 R--QEDAEEFLGCVLNRLNDEMIEFIKFNKTDQGNLNGEEPTNGEVHGEEDADDWMVICK 1859
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
NK VTRT F S +SDIF G+L+S V+ G + +QPF L LDI E ++++
Sbjct: 1860 GNKGTVTRTTDFGRSPISDIFRGKLRSRVQRDGVPPTYNIQPFFTLPLDI--EKAASVKE 1917
Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
AL + LEG S T V A + V ++ L +LILHL F Y G TK+ K+
Sbjct: 1918 ALEQLVGRDELEGVTCSKTKQE--VAAWQQVTLEELPVVLILHLKCFDYKMDGCTKILKT 1975
Query: 474 VRFPLQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 528
+ FP++L + L+ + SA+ ++Y+L A V H G++ SKGHY D + W+
Sbjct: 1976 LDFPIELKIDSKLMSSKGKSYSAKQKQYKLFAVVYHDGKEASKGHYITDVYHTGYASWIR 2035
Query: 529 FDDASVTAIGTSKVLHDQA----YVLFYKQV 555
+DD+ V + VL +A Y+L+Y+++
Sbjct: 2036 YDDSIVKPVPEYNVLRPRAPRVPYLLYYRRM 2066
>gi|307182775|gb|EFN69898.1| Ubiquitin carboxyl-terminal hydrolase 10 [Camponotus floridanus]
Length = 905
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 200/393 (50%), Gaps = 66/393 (16%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 248
K LLPRGL N N C++N+ LQAL++C PF LL+ + +PK + P +
Sbjct: 535 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLKAM---PLPKNRGKNSATPLIDN 591
Query: 249 FVGFVSDFD--TPSGGSSKKKNI-------SVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
V FV +F T + +K + +V+DI G F PS +LK+ + S
Sbjct: 592 MVKFVREFTPLTEAARMPRKDRVHNKRGEDTVIDIHSGVAFEPSYIYTMLKHTSAAGAFS 651
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 357
+ GR QEDA+EFLS +++ ++DE+L E +GPKNK
Sbjct: 652 VEGR--QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKG 684
Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
AVTR F + LSDIF GQL+S V G + + VQPF L LD+ + ++++AL +
Sbjct: 685 AVTRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVKNALEI 742
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKLHKS 473
+ +EG S T + A K V ++ L ILILHL F Y S G +K+ KS
Sbjct: 743 LVGKDQVEGMTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKYSNGCSKILKS 800
Query: 474 VRFPLQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQW 526
+ FP+ L + L +P+ + ++Y+L A H G++ +KGHY DA + W
Sbjct: 801 MEFPVDLKIDGKFL-SPNTVKKLGPKQKQYKLFAVTYHDGKEATKGHYITDAFHIGYGSW 859
Query: 527 LHFDDASVTAIGTSKVLHDQA----YVLFYKQV 555
+ +DD++V ++ S VL + Y+L+Y++
Sbjct: 860 VRYDDSAVKSVPESNVLRPTSPRVPYLLYYRRC 892
>gi|119615876|gb|EAW95470.1| ubiquitin specific peptidase 10, isoform CRA_a [Homo sapiens]
Length = 861
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 196/374 (52%), Gaps = 43/374 (11%)
Query: 217 LQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSDFD---TPSGGSSKKKNIS 270
++AL++C P L++ L ++ P P + +FV +++F P +
Sbjct: 493 IKALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKI 552
Query: 271 VLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG- 327
V DI G F P+ +L +S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 553 VRDIRPGAAFEPTYIYRLLTVNK----SSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKL 608
Query: 328 --------------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++ S+N EDEWE VGP+NK++VTR F+ + ++ I
Sbjct: 609 LSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGI 668
Query: 374 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
FGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 669 FGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQ 728
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V + V ++ L +L+LHL RF Y + G KL K++ +P+ L + ++LL +P
Sbjct: 729 E---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGV 784
Query: 493 EG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL-- 543
+ R Y L A V HHG + GHYT D + WL DD +V I +V+
Sbjct: 785 KNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKP 844
Query: 544 --HDQAYVLFYKQV 555
AY+L+Y++V
Sbjct: 845 TAERTAYLLYYRRV 858
>gi|225682996|gb|EEH21280.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 861
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 193/372 (51%), Gaps = 41/372 (11%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 352 PRGLVNTGNMCYMNSILQILVFCVPFYEFLDKISRRAVHSIKSELPLIDAMIMFMREFRV 411
Query: 259 PSGGSSKKK------NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+S +K + G F P V+++ P + G Q+DAQEFL
Sbjct: 412 IDAATSAEKLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 468
Query: 313 FIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRTQS 364
F+++++H+E + ++TS +T S A E + W VG K K ++TR+
Sbjct: 469 FLLEELHEECTQAGKQATSTGPDIPTPVDTDSASAASEPSVEGWLEVGHKQKPSITRSSG 528
Query: 365 FLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ + PE
Sbjct: 529 HVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVTNIIDALKGLTKPE 588
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 480
++G SS G VTA K V I+TL +LILHL RF Y S +G+ K+ K V +PL+L
Sbjct: 589 TMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTKGTQKIWKRVGYPLEL 646
Query: 481 VLGRDLLVTPSAEGR--------------KYELVATVTHHGRDPSKGHYTADARYFN-DQ 525
+ R++ P KY L + HHG++ S GHYT D R + +
Sbjct: 647 EVPREVF-PPHRRNNLLAAQGSGGGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGRE 705
Query: 526 WLHFDDASVTAI 537
W+ DD + +
Sbjct: 706 WVRLDDTVIRRV 717
>gi|358058490|dbj|GAA95453.1| hypothetical protein E5Q_02107 [Mixia osmundae IAM 14324]
Length = 837
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 197/417 (47%), Gaps = 73/417 (17%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFDT 258
PRGL+N+GNLCF N Q+L+ C PF L+ L G P + A + ++ F
Sbjct: 393 PRGLVNTGNLCFANTIFQSLLYCGPFYNLISLLGQETSSDLGGKTPLMEAMIVYLQLFRI 452
Query: 259 PSGGSSKKKNISVLDI----------GRPFSPSM-FEAVLKNFTPDVPNSISGRPRQEDA 307
++ +S LD G PF+P M ++A+ N D R QEDA
Sbjct: 453 --MNRQEQDKLSALDASPPEPPTASDGEPFAPEMLYDAMKMNKRFDQ----MRRGLQEDA 506
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE----EDEWETVGPKNKSAVTRTQ 363
QEFL + +D +H+E+L + G T + A +D W VG K ++A TR+
Sbjct: 507 QEFLGYFLDTLHEEVLSAIDRHDELLGNRTRQAAQASNAPADDGWLEVGNKGRTATTRSS 566
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG+L+SV++ G K S T++PFL L LDI +HTIEDAL S PE
Sbjct: 567 ATRESPITSIFGGRLRSVLRCPGQKDSVTLEPFLQLQLDIEEPGIHTIEDALIGLSQPEL 626
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVL 482
L+ + +T VVTA K + ++ + IL+LHL RFSY S G K +K + + L L L
Sbjct: 627 LQDF---ATQQGQVVTASKQLFLEAIPPILVLHLKRFSYTSAGGILKSNKIIGYDLDLDL 683
Query: 483 GRDLLVTPSAEGR----KYELVATVTHHGRDPSKGHYTADARYFN--------------- 523
+L PS + + +Y+L + V HHG+ GHYT R
Sbjct: 684 PSAILA-PSLKMQTGIPRYQLTSVVYHHGKSALGGHYTVSVRPPAPFAAKPAGTTAAEVS 742
Query: 524 ----DQWLHFDDASVTAIGTSKV----------------------LHDQAYVLFYKQ 554
QW H DD + + ++V + AY+LFY++
Sbjct: 743 ANEAQQWYHLDDTHIRMVPPAQVAVNREKEILRLSLPSASALGGTIEKSAYLLFYRR 799
>gi|156055008|ref|XP_001593428.1| hypothetical protein SS1G_04855 [Sclerotinia sclerotiorum 1980]
gi|154702640|gb|EDO02379.1| hypothetical protein SS1G_04855 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 885
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 195/380 (51%), Gaps = 45/380 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P + A + F+ +F
Sbjct: 409 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSETPLIDAMIMFMREF 468
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 307
S ++ L G E +FTPD + R PR Q+DA
Sbjct: 469 PVIDSAKSVEQLKMRLKEGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 522
Query: 308 QEFLSFIMDQMHDELL---------KLQGESTSINGANTALVSLAE-----EDEWETVGP 353
+EFL F+++ +HDE + K +T +N ++ A +D W+ VGP
Sbjct: 523 EEFLGFLLEGLHDECVHVMKSSDSSKTPAATTPMNAPSSPTSDSASRRGSIDDVWQQVGP 582
Query: 354 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
K K+A+TR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI S +H I
Sbjct: 583 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPNIHNI 642
Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 470
DAL+ + E L G S G VTA K V I+T+ +LILHL RF Y + G T K+
Sbjct: 643 IDALKGLTHSEVLHGDFKSPKGPN--VTATKQVFIETVPPVLILHLKRFQYDNTGGTQKI 700
Query: 471 HKSVRFPLQLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFN 523
K V +PL+L L +++ + G KY L+ V HHG++ S GHYT D R +
Sbjct: 701 WKKVGYPLELELPKEVFPK-TKRGVFAHDGYPKYRLIGVVYHHGKNASGGHYTVDVRRQD 759
Query: 524 -DQWLHFDDASVTAIGTSKV 542
+W+ DD + + + V
Sbjct: 760 GKEWIRLDDTVIKRVRSEDV 779
>gi|258569845|ref|XP_002543726.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903996|gb|EEP78397.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 886
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 192/370 (51%), Gaps = 33/370 (8%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 418 PRGLVNTGNMCYMNSILQVLIFCVPFYDFLDRISRRAAHSFKSELPFLDAMIMFMREFRV 477
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+S + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 478 IDSATSVEQLRLRLKQNELEQYGASFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 534
Query: 313 FIMDQMHDELLKLQ------GESTSINGAN-TALVSLAEEDEWETVGPKNKSAVTRTQSF 365
F+ +++H+E L E+ S+N + T++ + + W VG K K AVTR+
Sbjct: 535 FLFEELHEECLHAMKSSATTSETASVNDVDATSMTDDSTTEGWLEVGHKQKPAVTRSAGH 594
Query: 366 LP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ S ++ IFGG+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 595 IAAESPITKIFGGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 654
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLV 481
+ G +SS G TA K V I++L +LILHL RF Y ++G+ K+ K V +PL+L
Sbjct: 655 MHGDFSSSRGTKA--TATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLELE 712
Query: 482 LG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 713 IPKEVFPPHRRNILAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWVRIDDT 772
Query: 533 SVTAIGTSKV 542
+ + + V
Sbjct: 773 VIRRVRSEDV 782
>gi|346322680|gb|EGX92278.1| ubiquitin C-terminal hydrolase, putative [Cordyceps militaris CM01]
Length = 913
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 200/373 (53%), Gaps = 40/373 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ LM CSPF L ++ R + + P L A + F+ ++
Sbjct: 464 LEPRGLINTGNMCYMNSVLQVLMYCSPFYDFLDQISKRAVYSFNSETPLLDAMIMFMHEY 523
Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDA 307
P+ +K + + G PF+P ++EA+ L F + R Q+DA
Sbjct: 524 KVLKSAPNNEQLRKLIRGEEIERYGEPFTPDFVYEAIRQLSRF------ASMRRGHQQDA 577
Query: 308 QEFLSFIMDQMHDELLKLQGE----STSINGANTALV--SLAEEDEWETVGPKNKSAVTR 361
+EFL F++ + DE + ++ + ++ A V S+ +W VG K + AVTR
Sbjct: 578 EEFLGFLLQSLDDECTLVMSNASQTASQTDSSDAASVGGSVDATGDWLEVGRKQRPAVTR 637
Query: 362 TQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
+ S + ++ IFGG L+S + G K S T +P+ L LDI + + + DALR +
Sbjct: 638 SSGSNASTPVTKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGAPEIRNVVDALRGLTR 697
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQ 479
PE ++G S G +TA K V I+TL +LILHL RF + ++ G+TK+ K V +PL
Sbjct: 698 PERMQGDFNSPRGKD--ITATKQVFIETLPPVLILHLKRFQFDAEGGTTKIWKKVGYPLD 755
Query: 480 LVLGRDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 529
L + R+ L S + R +Y+L++ + HHG++ S GHYTAD R + +W+
Sbjct: 756 LEIPREAL---SRQARQSMADGASPRYKLISVIYHHGKNASGGHYTADVRRQDGCEWMRL 812
Query: 530 DDASVTAIGTSKV 542
DD + + + +V
Sbjct: 813 DDTVLRRLRSEEV 825
>gi|212538153|ref|XP_002149232.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
gi|210068974|gb|EEA23065.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
Length = 861
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 185/364 (50%), Gaps = 27/364 (7%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L C PF Q L + R K+ P + A + F+ +F
Sbjct: 401 LEPRGLVNTGNMCYMNSVLQILAFCVPFYQFLDYIGHRATHSFKSDVPLIDATIMFMREF 460
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S+ K+ + + G F P V++ P + G Q+DAQEF
Sbjct: 461 RVIDAACSEDQLRMRLKHKELEEYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 517
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL--PS 368
L F ++++H+E T A++ S E W VG K KSA+TR+ + S
Sbjct: 518 LGFFLEELHEECAHALQSGTMQANADSGEPS--EASGWLEVGHKQKSAITRSSGDVDFES 575
Query: 369 ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
++ IFGG+++S K GNK S T++P+ L LDI S V+ I DAL+ + PE L G
Sbjct: 576 PITKIFGGKIRSEFKVPGNKNSVTLEPYQPLQLDIGSPEVNNIIDALKGLTKPETLHGDF 635
Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDL 486
+S G V A K V I+TL +LILHL RF Y S G+ K+ K V +PL+L + R++
Sbjct: 636 SSPRGPK--VAATKQVFIETLPPVLILHLKRFQYDSVTHGTQKIWKKVGYPLELEIPREV 693
Query: 487 LVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIG 538
Y L+ + HHG++ S GHYT D R + +W+ DD + +
Sbjct: 694 FPPHRRNAMAIHGGLPHYRLIGVIYHHGKNASGGHYTVDVRRQDGREWIRMDDTVIRRVR 753
Query: 539 TSKV 542
+ V
Sbjct: 754 SEDV 757
>gi|242807459|ref|XP_002484960.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715585|gb|EED15007.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 861
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 188/365 (51%), Gaps = 28/365 (7%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L C PF Q L + R K+ P + A + F+ +F
Sbjct: 400 LEPRGLVNTGNMCYMNSVLQILAFCVPFYQFLDHIGHRATHSFKSDVPLIDATIMFMREF 459
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S+ K+ + + G F P V++ P + G Q+DAQEF
Sbjct: 460 RVIDAAKSEDQLRMRLKHKELEEYGDAFIPEYVYDVIRQL-PRFRDMRRGH--QQDAQEF 516
Query: 311 LSFIMDQMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP-- 367
L F ++++H+E LQ + + A + + +E D W VG K KSA+TR+ +
Sbjct: 517 LGFFLEELHEECAHALQSGAPQSSAAPSE--NSSEADGWLEVGHKQKSAITRSSGDVEFE 574
Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
S ++ IFGG+++S K GNK S T++P+ L LDI S V I DAL+ + PE + G
Sbjct: 575 SPITKIFGGKIRSEFKVPGNKNSVTLEPYQPLQLDIGSPEVSNIIDALKGLTKPETIHGD 634
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRD 485
+S G V A K V I+TL +LILHL RF Y S G+ K+ K V +PL+L + R+
Sbjct: 635 FSSPRGPK--VAATKQVFIETLPPVLILHLKRFQYDSVTHGTQKIWKKVGYPLELEIPRE 692
Query: 486 LLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAI 537
+ Y L+ + HHG++ S GHYT D R + +W+ DD + +
Sbjct: 693 VFPPHRRNAMAVHGGLPHYRLIGVIYHHGKNASGGHYTVDVRRQDGREWIRMDDTVIRRV 752
Query: 538 GTSKV 542
+ V
Sbjct: 753 RSEDV 757
>gi|410984097|ref|XP_003998368.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Felis catus]
Length = 1051
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 182/323 (56%), Gaps = 35/323 (10%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 516 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 571
Query: 246 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 572 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 627
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + V E E
Sbjct: 628 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNQKLTVSNGPRSPSVHEDEQDEPGEGSE 687
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP++K++VTR F+ + ++ IFGG ++SVV Q ++ SAT+QPF L LDI S
Sbjct: 688 DEWEQVGPRSKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSRESATLQPFFTLQLDIQS 747
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 748 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 804
Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
G KL KSV +P+ L + ++LL
Sbjct: 805 GGCQKLVKSVEYPVDLEISKELL 827
>gi|327295689|ref|XP_003232539.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
gi|326464850|gb|EGD90303.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
Length = 858
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 196/373 (52%), Gaps = 34/373 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R K+ P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 431
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
SS + K + + G F P V+++ P + G Q+DAQEF
Sbjct: 432 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 488
Query: 311 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 362
L F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 489 LGFLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRS 548
Query: 363 Q--SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 549 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 608
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
PE + G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL
Sbjct: 609 PETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 666
Query: 479 QLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
+L + R+ L + KY L+ + HHG+ S GHYT + R + +W+ F
Sbjct: 667 ELEIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRF 726
Query: 530 DDASVTAIGTSKV 542
DD + + + +V
Sbjct: 727 DDTYIRRVRSEEV 739
>gi|442629286|ref|NP_001261228.1| CG32479, isoform B [Drosophila melanogaster]
gi|440215092|gb|AGB93923.1| CG32479, isoform B [Drosophila melanogaster]
Length = 797
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 387 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 441
Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 442 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPT---EIYKLWNDSREE 498
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 499 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 556
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 557 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 614
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 615 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 672
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 673 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 732
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV + VL Y+L+Y++
Sbjct: 733 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 761
>gi|315044965|ref|XP_003171858.1| ubiquitin carboxyl-terminal hydrolase 10 [Arthroderma gypseum CBS
118893]
gi|311344201|gb|EFR03404.1| ubiquitin carboxyl-terminal hydrolase 10 [Arthroderma gypseum CBS
118893]
Length = 926
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 196/373 (52%), Gaps = 34/373 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R K+ P + A + F+ +F
Sbjct: 440 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 499
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
SS + K + + G F P V+++ P + G Q+DAQEF
Sbjct: 500 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 556
Query: 311 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 362
L F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 557 LGFLLEELHDECLLATKNAMADKSDVSTSSDVDSQSIADDSTGDGWLEVGHKQKASVTRS 616
Query: 363 Q--SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 617 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 676
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
PE + G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL
Sbjct: 677 PETMHGDFQSSRGPK--VNATKQVFIEKLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 734
Query: 479 QLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
+L + R+ L + KY L+ + HHG+ S GHYT + R + +W+ F
Sbjct: 735 ELEIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRF 794
Query: 530 DDASVTAIGTSKV 542
DD + + + +V
Sbjct: 795 DDTYIRRVRSEEV 807
>gi|310796856|gb|EFQ32317.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 947
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 213/429 (49%), Gaps = 45/429 (10%)
Query: 143 NAGGHANPSPISKFHVLCDGNIDGRDQN--AAACNSSISGSKEVPMKAINEPVKSVKDLL 200
NA G P+ + + DG+++G + NS ++ ++ + P K V+ +
Sbjct: 444 NANGSGTPAATNGAAINGDGSVNGSASSFSTGNANSLVAAIQDF---RVGNPAK-VQFIE 499
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF-- 256
PRGLIN+GN+C++N+ LQ L+ C+PF L ++ R + K+ P + A + F+ +F
Sbjct: 500 PRGLINTGNMCYMNSVLQVLLFCAPFYNFLDQVSKRAVHKFKSDTPVIDAMIMFMREFRV 559
Query: 257 ----DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
D+ K K+ + G F P E V K P + R Q+DAQEFL
Sbjct: 560 IDATDSVEKLRRKLKSEQLEQYGESFIP---EFVYKAIQPLPAFASMRRGHQQDAQEFLG 616
Query: 313 FIMDQMHDELLKLQGESTSING-----ANTALVSLAEE----DEWETVGPKNKSAVTRTQ 363
I++ + +E ++ NG ++ S+ E D W VG + ++ TR+
Sbjct: 617 LILNAIDEECAQVMSAGGVSNGLAEARPTSSAASVVESNDGADGWFEVGSRQRAVETRSS 676
Query: 364 -SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ + ++ +F GQ +S ++ G K S T +PF L LDI + +H + DA++ + PE
Sbjct: 677 GASSTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPHIHNVVDAIKGLTVPE 736
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
L+ G+A +T K I+TL ILILHL RF + ++G+TK+ K V +PL L L
Sbjct: 737 RLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKIAKKVGYPLDLQL 787
Query: 483 G--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 533
R+ LV A KY L+ V HHG+ + GHYT D R +D +W+ DD
Sbjct: 788 PAEVLSKRRRNALVAEGAPMPKYRLIGVVYHHGKQANGGHYTVDVRRQDDNEWIRLDDTV 847
Query: 534 VTAIGTSKV 542
+ + + V
Sbjct: 848 IRRVRSEDV 856
>gi|119196183|ref|XP_001248695.1| hypothetical protein CIMG_02466 [Coccidioides immitis RS]
Length = 893
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 194/371 (52%), Gaps = 34/371 (9%)
Query: 201 PRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFD 257
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 423 PRGLVNTGNMCYMNSQVLQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFR 482
Query: 258 TPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 483 VIGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFL 539
Query: 312 SFIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQS 364
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 540 GFLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSG 599
Query: 365 FLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 600 HIASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPE 659
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 480
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 660 TMHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLEL 717
Query: 481 VLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 718 EIPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDD 777
Query: 532 ASVTAIGTSKV 542
+ + + V
Sbjct: 778 TVIRRVRSEDV 788
>gi|408387754|gb|EKJ67464.1| hypothetical protein FPSE_12383 [Fusarium pseudograminearum CS3096]
Length = 948
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 194/366 (53%), Gaps = 29/366 (7%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGLIN+GN+C++N+ LQ LM C PF L ++ R + K+ P + A + F+ +F
Sbjct: 505 LEPRGLINTGNMCYMNSVLQVLMFCLPFYDFLNQISKRAVHSFKSDTPLIDAMIMFMHEF 564
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 308
T + + KN + G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 565 KTIKSAAGVEPLRLALKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 619
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
EFL F++ + DE + T + +A D+W VG K KSAV+R+
Sbjct: 620 EFLGFLLQSLDDECTTVLKNFTPDEAEHQPSAGSDAGGADDWLEVGRKQKSAVSRSSGSN 679
Query: 367 PSALSD-IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
S+ IFGG L+S + G K S T +P+ L LDI S V + DALR + PE L+
Sbjct: 680 SSSPISRIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQ 739
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 483
G S G VTA K V I++L +LILHL RF + ++ G+ K+ K + +PL+L +
Sbjct: 740 GDFNSPRGKE--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 797
Query: 484 RDLLV-----TPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTA 536
R+ L T EG KY+L++ V HHG++ S GHYT D R +W+ DD ++
Sbjct: 798 REALSRQKRQTLGEEGMPKYKLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTAIRR 857
Query: 537 IGTSKV 542
+ + V
Sbjct: 858 VRSEDV 863
>gi|307102558|gb|EFN50829.1| hypothetical protein CHLNCDRAFT_55534 [Chlorella variabilis]
Length = 922
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 198/420 (47%), Gaps = 69/420 (16%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----------AGYPTLTAFV 250
PRGL N GNLCF+N+ LQAL+ S F QLL LR + P+ A F
Sbjct: 507 PRGLFNPGNLCFMNSILQALLGSSRFCQLLAALR-KAAPELDAAATPTLAALAELAAEFK 565
Query: 251 GFVSDFDTPSGGSSKK---------------KNISVLDIG-RPFSPSMFEAVLKNFTPDV 294
+ + GG++ + K +L +G RP P M V+ +F P
Sbjct: 566 PVEAPRERQGGGAAAEDGQQQGVGAAAAGAAKAAGLLMLGDRPLMPGMLMEVVNSFRPHG 625
Query: 295 -------------------------PNSISGRP---------RQEDAQEFLSFIMDQMHD 320
P S+ P QEDA +FL +++D+MH
Sbjct: 626 CGAGGGATSTCSIVLGPGKSNGSTGPMSLQASPCATIAAPRWEQEDAHDFLEYLVDRMHQ 685
Query: 321 ELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
E +L G S + A AEEDEW T + + ++ + +S +F G
Sbjct: 686 EWARLSGGGAALSATAASAAANAAKAAEEDEWLTRSGRRTTKRQPLKTDSETTVSGLFRG 745
Query: 377 QLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
S V QG+ S T QPF+ L L I ++V +++DAL L +A E++ GY+ T +
Sbjct: 746 TTLSTVTCQGHPPSETPQPFVSLSLHILPDSVKSVDDALDLLTATESISGYKPQDT--SA 803
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GR 495
A K V++Q L +L+L LMRF + K+ K V FP +L + R L + S E G
Sbjct: 804 PTEATKVVRLQRLPPLLVLFLMRFDPANL-HQKISKPVAFPPRLKMNRTWLASDSGERGA 862
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
+Y+LV+TVTHHG+ GHYTAD R WLHFDD V + +VL + Y+LFY++V
Sbjct: 863 EYDLVSTVTHHGKTIGSGHYTADVRQPCGAWLHFDDDRVDKVSQQQVLTSRPYLLFYQRV 922
>gi|443920841|gb|ELU40673.1| ubiquitin-specific protease [Rhizoctonia solani AG-1 IA]
Length = 1056
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 207/409 (50%), Gaps = 60/409 (14%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTL-TAFVGFVSDFD 257
PRGLINSGN+CF N +QAL+ +PFV+L + L +P +G +L A + F+ +F
Sbjct: 647 PRGLINSGNMCFANVVMQALVYSAPFVRLFETL-AHLVPGSLSGKTSLYEATILFLREFT 705
Query: 258 TP--------------SGGSSKKKNISVLDIG---RPFSPSMFEAVLKNFTPDVPNSISG 300
SG S+ PF P + A +K S
Sbjct: 706 PEPESPPPAAPKAKSRSGASTPMPPEQTRQQAWNENPFFPELLYAAMKQNKRFDSMQFSQ 765
Query: 301 RPRQEDAQEFLSFIMDQMHDELL----KLQGESTS-----INGA--------NTALVSLA 343
R QEDA+EFL F +D +H+ELL ++Q E+ NG+ NT V
Sbjct: 766 RGHQEDAEEFLGFFLDTLHEELLSILSRVQTETAPEGTAWTNGSISRTPGVENTREVQRP 825
Query: 344 -----EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFL 397
++ +W VG KNK A+TRT SA++ IFGG+L+SV+ G +K S T++P+
Sbjct: 826 VSPDNKDGDWMEVGKKNKPAITRTTRATESAITRIFGGKLRSVLSIPGSSKDSVTLEPYQ 885
Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
L LDI S+ + TIEDAL+ + PE + + S G+V AKK V +++L +LILHL
Sbjct: 886 PLQLDIQSDHIRTIEDALKHITVPEIVSMH---SEARGGMVDAKKQVTLESLPPLLILHL 942
Query: 458 MRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGH 514
R Y ++G K K + + L + R +V+P+ + KY+L V HHG+ + GH
Sbjct: 943 KRLVYDAKGIQKNSKVIEYSTTLEI-RPEIVSPTRRTKQSIKYQLYGVVYHHGKHATGGH 1001
Query: 515 YTADA-RYFNDQWLHFDDASVTAIGTSKVL-HDQ-------AYVLFYKQ 554
YT D R + +W+ DD + + V H++ AY+LFY++
Sbjct: 1002 YTIDVLRQDHSEWVRIDDTHIEPVTEKDVTAHEKHAKADKTAYLLFYRR 1050
>gi|428169103|gb|EKX38040.1| hypothetical protein GUITHDRAFT_165307 [Guillardia theta CCMP2712]
Length = 634
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 179/379 (47%), Gaps = 47/379 (12%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF---- 256
PRG++N GNLCF+NA LQ+L+ C F QLL L IP+ TL++FV S+F
Sbjct: 220 PRGMVNMGNLCFMNAVLQSLIGCRAFFQLLHGLLNSHIPRE-LKTLSSFVSLASEFVELE 278
Query: 257 -------DTPSGGSSKKKNISV-----------LDIGRPFSPSMFEAVLKNFTPDVP-NS 297
D K+ S L P +P F ++ F P P
Sbjct: 279 TAPPPSQDVKDANKEAKETSSTDAAAAAVLVRSLKSSTPLNPGYFFDLVSTFAPTDPVRP 338
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING-------------ANTALVSLAE 344
G+ RQEDAQEFLSF+++ +HDE + + S +G + T + +
Sbjct: 339 GRGKARQEDAQEFLSFLLNCLHDEFVSFENRVLSADGNGPNGGSGEDGGSSTTGADASPD 398
Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
+D+W+ VG K R + S +S IFGGQ ++ ++ KASA+++PFL ++LDI
Sbjct: 399 DDDWQEVGGHAKVTFVRKLNMETSPVSKIFGGQFRTTIRYSSTKASASLEPFLCINLDIA 458
Query: 405 SEAVH------TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
E+ H T+ + + + PE L+G A++ +I+ +L+LHL
Sbjct: 459 MESSHKDVKSVTLHEIISSYFKPEKLDGVVNGCQEG----KAQRHAQIEKGPDVLVLHLK 514
Query: 459 RFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTAD 518
RF + + K+ V +P L L + + + Y LVA V+HHG GHYT+
Sbjct: 515 RFRFDGASAHKILTRVSYPDTLSLEEYCVKGVGQDFQHYRLVAVVSHHGSKMHHGHYTSM 574
Query: 519 ARYFNDQWLHFDDASVTAI 537
R QW+ DD ++ +
Sbjct: 575 VRQPTGQWIRLDDHNLEIV 593
>gi|340514126|gb|EGR44394.1| predicted protein [Trichoderma reesei QM6a]
Length = 791
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 192/375 (51%), Gaps = 33/375 (8%)
Query: 193 VKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFV 250
+ V L PRGLIN+GN+C++N+ LQ L+SC PF L ++ + K+ P + A +
Sbjct: 338 IDKVDFLEPRGLINTGNMCYMNSVLQVLVSCVPFYDFLDQVGKKAAHSFKSETPLVDALI 397
Query: 251 GFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 303
F+ +F K SV + R FE + FTP+ V ++I PR
Sbjct: 398 MFMREFKV------LKSAPSVEQLNRILKSEDFERYGEPFTPEFVYDAIRHLPRFASMRR 451
Query: 304 --QEDAQEFLSFIMDQMHDE----LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 357
Q+DA+EFL F++ + DE + L + + +N + S D+W VG K ++
Sbjct: 452 GHQQDAEEFLGFLLQSLDDECTHVMRDLPMGNEEVPSSNASTGSGVASDDWLEVGRKQRA 511
Query: 358 AVTRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
AV+R S ++ IFGG L+S + G K S T + + L LDI S +H + DALR
Sbjct: 512 AVSRLSGHNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIGSPDIHNVVDALR 571
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSV 474
+ PE L+G S G V A K V I++L +LILHL RF + ++ G+ K+ K +
Sbjct: 572 GLTRPERLQGDFNSPRGKD--VVATKQVFIESLPPVLILHLKRFQFDAEGRGTVKIWKKI 629
Query: 475 RFPLQLVLGRDLLVTP------SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
+PL+L + R+ L +A +Y L++ V HHG++ S GHYT D R + +W+
Sbjct: 630 GYPLELEIPREALSRQRRQNLDNASMPRYRLISVVYHHGKNASGGHYTVDVRRQDGREWI 689
Query: 528 HFDDASVTAIGTSKV 542
DD + I V
Sbjct: 690 RLDDTVIRRIRPEDV 704
>gi|322694571|gb|EFY86397.1| Ubiquitin carboxyl-terminal hydrolase family protein [Metarhizium
acridum CQMa 102]
Length = 833
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 212/414 (51%), Gaps = 49/414 (11%)
Query: 168 DQNAAACNSSISGSKEVPMKA--INEPVKSVKD--------LLPRGLINSGNLCFLNATL 217
D AA ++ GSK P E ++S K + PRGL+N+GN+C++N+ L
Sbjct: 342 DAVEAATVPAVPGSKFSPANRSFFGEAIRSFKIDRTEKATLIEPRGLVNTGNMCYMNSVL 401
Query: 218 QALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLD-- 273
Q LM C+PF L +L R K+ P + A V F+ +F + SS K+ L
Sbjct: 402 QVLMFCAPFYDFLDQLSKRAAHSFKSETPLVDAMVMFLQEFKVLASASSSKQLRGTLKSQ 461
Query: 274 ----IGRPFSPS-MFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMHDELL---- 323
G PF+P ++EA+ + +P S R Q+DA+EFL F++ + DE
Sbjct: 462 VFELYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEEFLGFLLQSLDDECTLAMN 516
Query: 324 -KLQGESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKS 380
GE+ + N + + A +W VG K K+AV+R+ S+ ++ IFGG L+S
Sbjct: 517 KSFPGETEQVQNEKSIDHEAAAPSGDWLEVGRKQKAAVSRSSGSNTSSPITKIFGGLLRS 576
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
+ G K S T +P+ L LDI S V + DALR + PE L+G S G V A
Sbjct: 577 EFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQGDFNSPRGKD--VLA 634
Query: 441 KKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR--- 495
K V I++L +LILHL RF + + G+ K+ K + +PL+L + R++L S + R
Sbjct: 635 TKQVFIESLPPVLILHLKRFQFDATANGTIKIWKKIGYPLELEIPREVL---SRQRRQNI 691
Query: 496 ------KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKV 542
+Y+L++ V HHG++ S GHYT D R + Q W+ DD + I + +V
Sbjct: 692 GDGPLPRYKLISVVYHHGKNASGGHYTVDVRRQDGQEWIRLDDTLLQRIRSEEV 745
>gi|195490238|ref|XP_002093054.1| GE21106 [Drosophila yakuba]
gi|194179155|gb|EDW92766.1| GE21106 [Drosophila yakuba]
Length = 1513
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1103 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1157
Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 1158 FMTNFSSLPSGLRLRLNNLNKGAQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1214
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1215 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1272
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1273 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1330
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1331 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1388
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1389 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1448
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV + VL Y+L+Y++
Sbjct: 1449 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1477
>gi|194864707|ref|XP_001971067.1| GG14744 [Drosophila erecta]
gi|190652850|gb|EDV50093.1| GG14744 [Drosophila erecta]
Length = 1541
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1131 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1185
Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 1186 FMTNFSSLPSGLRLRLNNLNKGPQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1242
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1243 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1300
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1301 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1358
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1359 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1416
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1417 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1476
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV + VL Y+L+Y++
Sbjct: 1477 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1505
>gi|195586799|ref|XP_002083155.1| GD13581 [Drosophila simulans]
gi|194195164|gb|EDX08740.1| GD13581 [Drosophila simulans]
Length = 1051
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 195/389 (50%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A
Sbjct: 641 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAICL 695
Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 696 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 752
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 753 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 810
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 811 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 868
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 869 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 926
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 927 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 986
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV + VL Y+L+Y++
Sbjct: 987 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1015
>gi|195428110|ref|XP_002062117.1| GK17362 [Drosophila willistoni]
gi|194158202|gb|EDW73103.1| GK17362 [Drosophila willistoni]
Length = 1652
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 197/395 (49%), Gaps = 52/395 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1231 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1285
Query: 252 FVSDFDT-PSG-------------GSSKKKNISV----LDIGRPFSPSMFEAVLKNFTPD 293
F+++F PSG GS K L F P+ + K +
Sbjct: 1286 FMTNFTALPSGLRLRLNNNLNNNKGSQNKGKDEFAGVDLQCDMAFEPT---EIYKLWNDS 1342
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-----W 348
+ G RQEDA+EFL +++++++DE+L++ N A+E E W
Sbjct: 1343 REEHVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPNPQQNGQQEQADEPEDDGDVW 1400
Query: 349 ETV-GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
+ + +NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E
Sbjct: 1401 QMICNNRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EK 1458
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
++++AL + + LEG S T V A + + ++ L +LILHL F Y S G
Sbjct: 1459 AASVKEALEILIGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPIVLILHLKYFDYRSDGC 1516
Query: 468 TKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
TK+ K V FP++L + +L + + + R Y L A V H G++ SKGHY D + Q
Sbjct: 1517 TKILKKVEFPVELKIDAKILGSKKTAQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYQ 1576
Query: 526 -WLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 555
WL +DD+SV I VL Y+L+Y++
Sbjct: 1577 SWLRYDDSSVKPISEKHVLQPHTPRVPYLLYYRRC 1611
>gi|24654914|ref|NP_728554.1| CG32479, isoform A [Drosophila melanogaster]
gi|442629288|ref|NP_001261229.1| CG32479, isoform C [Drosophila melanogaster]
gi|21483414|gb|AAM52682.1| LD28815p [Drosophila melanogaster]
gi|23092724|gb|AAF47426.2| CG32479, isoform A [Drosophila melanogaster]
gi|220947592|gb|ACL86339.1| CG32479-PA [synthetic construct]
gi|440215093|gb|AGB93924.1| CG32479, isoform C [Drosophila melanogaster]
Length = 1517
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1107 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1161
Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 1162 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPT---EIYKLWNDSREE 1218
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1219 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1276
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1277 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1334
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1335 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1392
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1393 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1452
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV + VL Y+L+Y++
Sbjct: 1453 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1481
>gi|195336431|ref|XP_002034839.1| GM14362 [Drosophila sechellia]
gi|194127932|gb|EDW49975.1| GM14362 [Drosophila sechellia]
Length = 1427
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1017 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1071
Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 1072 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1128
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1129 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1186
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1187 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1244
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1245 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1302
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1303 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1362
Query: 530 DDASVTAIGTSKVLHDQA----YVLFYKQ 554
DD+SV + VL Y+L+Y++
Sbjct: 1363 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1391
>gi|380482368|emb|CCF41279.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
Length = 959
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 207/409 (50%), Gaps = 41/409 (10%)
Query: 161 DGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQAL 220
DG ++G + +A N++ + + N P K V+ + PRGLIN+GN+C++N+ LQ L
Sbjct: 474 DGAVNGGASSFSAGNTNTLAAAIQDFRVSN-PAK-VQFIEPRGLINTGNMCYMNSVLQVL 531
Query: 221 MSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF------DTPSGGSSKKKNISVL 272
+ C+PF L ++ R + K+ P + A + F+ +F D+ K K+ +
Sbjct: 532 LFCAPFYNFLDQVSKRAVHKFKSDTPVIDAMIMFMREFRVIDATDSVEKLRRKLKSEQLE 591
Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------ 326
G F P E V K P + R Q+DAQEFL I++ + +E ++
Sbjct: 592 QYGESFIP---EFVYKAIQPLPAFASMRRGHQQDAQEFLGLILNAIDEECAQVMSAGGLA 648
Query: 327 ---GESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SFLPSALSDIFGGQLKSVV 382
E+ + A +A+ S + W VG + ++ TR+ + + ++ +F GQ +S +
Sbjct: 649 NGSAETRPTSSAASAVESTDGAEGWFEVGSRQRAVETRSSGASSTTPITRLFSGQYRSEL 708
Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 442
+ G K S T +PF L LDI + +H + DA++ + PE L+ G+A +T K
Sbjct: 709 RRPGVKDSVTTEPFQSLQLDIGAPYIHNVVDAIKGLTVPERLQ-------GDAAPMT--K 759
Query: 443 SVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG--------RDLLVTPSAEG 494
I+TL ILILHL RF + ++G+TK+ K V +PL L L R+ LV A
Sbjct: 760 QTLIETLPPILILHLKRFKFDTEGTTKIGKKVGYPLDLQLPVEVLSKRRRNALVAEGAPM 819
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKV 542
KY L+ V HHG+ + GHYT D R +D +W+ DD + + + V
Sbjct: 820 PKYRLIGVVYHHGKQANGGHYTVDVRRQDDNEWIRLDDTVIRRVRSEDV 868
>gi|326483341|gb|EGE07351.1| hypothetical protein TEQG_06257 [Trichophyton equinum CBS 127.97]
Length = 803
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 195/373 (52%), Gaps = 34/373 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R K+ P + A + F+ +F
Sbjct: 317 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 376
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
SS + K + + G F P V+++ P + G Q+DAQEF
Sbjct: 377 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 433
Query: 311 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 362
L F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 434 LGFLLEELHDECLLATKNAMADKSDVSTSSDMDAHSIADDSTGDGWLEVGHKQKASVTRS 493
Query: 363 Q--SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 494 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 553
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
PE + G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL
Sbjct: 554 PETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 611
Query: 479 QLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
+L + R+ L + KY L+ + HHG+ S G YT + R + +W+ F
Sbjct: 612 ELEIPKEVFPPHRRNALSVQNGSLPKYRLIGVIYHHGKSASGGQYTVEVRRQDGREWVRF 671
Query: 530 DDASVTAIGTSKV 542
DD + + + +V
Sbjct: 672 DDTYIRRVRSEEV 684
>gi|194748629|ref|XP_001956747.1| GF24416 [Drosophila ananassae]
gi|190624029|gb|EDV39553.1| GF24416 [Drosophila ananassae]
Length = 1508
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 201/392 (51%), Gaps = 53/392 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1103 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1157
Query: 252 FVSDFDT-PSG----------GSSKKKNI----SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+S+F + PSG GS K S L F P+ + K +
Sbjct: 1158 FMSNFSSLPSGLRLRLNTLNKGSQNKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1214
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEE--DEWET 350
+ G RQEDA+EFL +++++++DE+L+ + S NG + S E+ D W+
Sbjct: 1215 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPSAQQNGQDQ---SEPEDGGDVWQM 1269
Query: 351 V-GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
+ +NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E
Sbjct: 1270 ICNNRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAA 1327
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 469
++++AL + + LEG S T V A + + ++ L +LILHL F Y S G TK
Sbjct: 1328 SVKEALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTK 1385
Query: 470 LHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQW 526
+ K V FP++L + +L + + + R Y L A V H G++ SKGHY D + W
Sbjct: 1386 ILKKVEFPVELKIDAKILGSKKTAQKQRAYRLFAVVYHDGKEASKGHYITDVFHSGYSSW 1445
Query: 527 LHFDDASVTAIGTSKVLHDQA----YVLFYKQ 554
L +DD+SV + VL Y+L+Y++
Sbjct: 1446 LRYDDSSVKPVSEKNVLQPHTPRVPYLLYYRR 1477
>gi|327287256|ref|XP_003228345.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like, partial
[Anolis carolinensis]
Length = 334
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 173/309 (55%), Gaps = 36/309 (11%)
Query: 275 GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GE 328
G F P+ +L + +S+S + RQEDA+E+L FI++ +H+E+L L+ E
Sbjct: 31 GAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHEEMLILKKLLSPHSE 86
Query: 329 STSI-NGANTALVSLAEE---------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++ NG T V+ EE DEWE VGP+NKS+VTR F+ + ++DIFGG +
Sbjct: 87 KLAVSNGPETPSVNEEEEQEEQGEGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHI 146
Query: 379 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
+SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T + V
Sbjct: 147 RSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---V 203
Query: 439 TAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG--- 494
+ V ++ L +L+LHL RF Y + G KL K++ +P+ L + ++LL +P +
Sbjct: 204 EISRRVTLEELPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIF 262
Query: 495 ---RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQ 546
R Y L A V HHG + GHYT D + WL DD +V I +V+
Sbjct: 263 KGQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQAVKVITQYQVVKPSAERT 322
Query: 547 AYVLFYKQV 555
AY+L+Y++V
Sbjct: 323 AYLLYYRRV 331
>gi|378728768|gb|EHY55227.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 898
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 206/411 (50%), Gaps = 46/411 (11%)
Query: 171 AAACNSSISGSKEVP--------MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMS 222
A+A NS++SG + M ++ E + L PRGL+N+GN+C++N+ LQ L+
Sbjct: 397 ASAANSNVSGGSKTETLSSVLHDMNSVPEKPSKISFLKPRGLVNTGNMCYMNSVLQVLVF 456
Query: 223 CSPFVQLLQELRTRDIP---KAGYPTLTAFVGFVSDFDTPSGGSS------KKKNISVLD 273
C PF L ++ R P K+ P + A + F+ ++ +S + K +
Sbjct: 457 CLPFYDFLAKVAQR-APHAFKSDTPLIDAIIMFIQEYPVICSANSVEQLRLRLKAEDYEN 515
Query: 274 IGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDAQEFLSFIMDQMHDELLKLQ------ 326
G F P A +K D+P R Q+DAQEFL F+++++H+E +
Sbjct: 516 YGDSFIPEYVYAAIK----DLPRFREMRRGHQQDAQEFLGFLLEELHEECARAMRSAGPS 571
Query: 327 ---GESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSV 381
G ++ I + + E W VG K K A+TR + S +++IFGG+L+S
Sbjct: 572 SNSGRASPIGSVSNTSEHVDAEGGWMEVGHKQKPAITRLSGAVSGESPITNIFGGKLRSE 631
Query: 382 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 441
+K GNK S T++ + L LDI S VH I DAL+ + PE+++G + G TA
Sbjct: 632 LKVSGNKLSVTLEQYSPLQLDIGSPQVHNIIDALKGMTRPESMQGDFYTPRGQKA--TAT 689
Query: 442 KSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLL-------VTPSA 492
K + I+TL +LILHL RF Y ++ K+ K + +PL+L + +++ T
Sbjct: 690 KQIFIETLPPVLILHLKRFHYDNTTKRVEKIWKKIGYPLELEIPKEVFPMQARNKYTVHG 749
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKV 542
KY+L + + HHG++ + GHYT D R + +W+ DD + I V
Sbjct: 750 TLPKYQLASVIYHHGKNANGGHYTVDIRRQDGREWIRMDDTLLRRIRAEDV 800
>gi|198465534|ref|XP_001353673.2| GA16935 [Drosophila pseudoobscura pseudoobscura]
gi|198150201|gb|EAL31187.2| GA16935 [Drosophila pseudoobscura pseudoobscura]
Length = 1717
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 201/390 (51%), Gaps = 49/390 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1308 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSDVKTPTVNAMMS 1362
Query: 252 FVSDFDT-PSG-----------GSSKKKNI---SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG +K K+ + L F P+ + K +
Sbjct: 1363 FMTNFSSLPSGLRLRLNTLNKAAQNKGKDEFAGTDLQCDIAFEPT---DIYKLWNDSREE 1419
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + S + W+ +
Sbjct: 1420 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPVPQQNGQEQPESEDGGEVWQKICN 1477
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1478 NRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1535
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + +EG S T V A K + ++ L +LILHL F Y S G TK+ K
Sbjct: 1536 EALEILVGRDQIEGVTGSKTKQE--VVAWKQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1593
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARY--FNDQWLH 528
V FP +L + +L + S + R Y L A V H G++ SKGHY D + +N+ WL
Sbjct: 1594 KVEFPAELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNN-WLR 1652
Query: 529 FDDASVTAIGTSKVLHDQA----YVLFYKQ 554
+DD+SV I +VL A Y+L+Y++
Sbjct: 1653 YDDSSVKPISEKQVLQPHAPRVPYLLYYRR 1682
>gi|66820366|ref|XP_643807.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
gi|74893995|sp|O96612.1|UBPB_DICDI RecName: Full=Ubiquitin hydrolase B
gi|4028549|gb|AAC97115.1| ubiquitin hydrolase B [Dictyostelium discoideum]
gi|60471837|gb|EAL69791.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
Length = 451
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 156/269 (57%), Gaps = 18/269 (6%)
Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEEDEWE 349
NS+ Q+DAQEFL F++D +H+E L L E +T++V +D WE
Sbjct: 191 NSLPQTICQQDAQEFLVFLLDLIHEEFLTLIKDIDIPKEDDKSTPTSTSIV----DDNWE 246
Query: 350 TVGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
VG K K+A+ T +Q LP + +S IF G L+S G+K S TV+PF LHLDI E
Sbjct: 247 VVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEE 306
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
++++EDAL+ F PE +EGY T ST ++A KS ++L +ILI+H RF++ S S
Sbjct: 307 INSLEDALKFFMKPEIIEGY-TCSTKKIE-ISASKSWSFESLPRILIVHFKRFAFESDTS 364
Query: 468 TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QW 526
KL K +RFP QL L + +KY L + V+HHGR S+GHYT D QW
Sbjct: 365 KKLDKLIRFPTQLSLST---ASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQW 421
Query: 527 LHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
+ +DD++ T + VL+ +AY+L Y+ V
Sbjct: 422 IRYDDSTFTEVKEQDVLNREAYLLLYQLV 450
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-YPTLTAFVGFVSDF 256
RGLIN+ N CF+N LQ+L C F+++++ L D+ G YPTL +F F +++
Sbjct: 19 RGLINTSNTCFMNVILQSLTGCQLFLRVIKNL--SDLEDLGKYPTLHSFNQFYTEY 72
>gi|322710343|gb|EFZ01918.1| ubiquitin hydrolase, putative [Metarhizium anisopliae ARSEF 23]
Length = 809
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 197/371 (53%), Gaps = 39/371 (10%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
PRGL+N+GN+C++N+ LQ LM C+PF L ++ R K+ P + A V F+ +F
Sbjct: 361 PRGLVNTGNMCYMNSVLQVLMFCAPFYDFLDQVSKRAAHSFKSETPLVDAMVMFLQEFKV 420
Query: 259 PSGGSSKKKNISVLD------IGRPFSPS-MFEAVLKNFTPDVPNSISGRP-RQEDAQEF 310
+ SS K+ S L G PF+P ++EA+ + +P S R Q+DA+EF
Sbjct: 421 LASASSSKQLRSTLKSQVFELYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEEF 475
Query: 311 LSFIMDQMHDELL-----KLQGESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
L F++ + DE GE+ + + + + A +W VG K K+AV+R+
Sbjct: 476 LGFLLQSLDDECTLVMNKSFPGETEQVPDEKSIDHEAAAPSGDWLEVGRKQKAAVSRSSG 535
Query: 365 FLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
S+ ++ IFGG L+S + G K S T +P+ L LDI S V + DALR + PE
Sbjct: 536 SNTSSPITKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSPDVRNVVDALRGLTRPER 595
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLV 481
L+G S G V A K V I++L +LILHL RF + + G+ K+ K + +PL+L
Sbjct: 596 LQGDFNSPRGKD--VLATKQVFIESLPPVLILHLKRFQFDATANGTIKIWKKIGYPLELE 653
Query: 482 LGRDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDD 531
+ R+ L S + R +Y+L++ V HHG++ S GHYT D R + Q W+ DD
Sbjct: 654 IPREAL---SRQRRQNIGDGPLPRYKLISVVYHHGKNASGGHYTVDVRRQDGQEWIRMDD 710
Query: 532 ASVTAIGTSKV 542
+ I + +V
Sbjct: 711 TVLQRIRSEEV 721
>gi|195175018|ref|XP_002028260.1| GL16888 [Drosophila persimilis]
gi|194117392|gb|EDW39435.1| GL16888 [Drosophila persimilis]
Length = 1195
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 201/390 (51%), Gaps = 49/390 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 786 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSDVKTPTVNAMMS 840
Query: 252 FVSDFDT-PSG-----------GSSKKKNI---SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
F+++F + PSG +K K+ + L F P+ + K +
Sbjct: 841 FMTNFSSLPSGLRLRLNTLNKAAQNKGKDEFAGTDLQCDIAFEPT---DIYKLWNDSREE 897
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
+ G RQEDA+EFL +++++++DE+L KL + S + W+ +
Sbjct: 898 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPVPQQNGQEQPESEDGGEVWQKICN 955
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 956 NRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1013
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+AL + + +EG S T V A K + ++ L +LILHL F Y S G TK+ K
Sbjct: 1014 EALEILVGRDQIEGVTGSKTKQE--VVAWKQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1071
Query: 473 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARY--FNDQWLH 528
V FP +L + +L + S + R Y L A V H G++ SKGHY D + +N+ WL
Sbjct: 1072 KVEFPAELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNN-WLR 1130
Query: 529 FDDASVTAIGTSKVLHDQA----YVLFYKQ 554
+DD+SV I +VL A Y+L+Y++
Sbjct: 1131 YDDSSVKPISEKQVLQPHAPRVPYLLYYRR 1160
>gi|328768046|gb|EGF78093.1| hypothetical protein BATDEDRAFT_35737 [Batrachochytrium
dendrobatidis JAM81]
Length = 659
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 197/390 (50%), Gaps = 41/390 (10%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTLTAFVGFVS 254
K + PRGL N GN+CF+NA LQ L+ C PF L+ + K+ P + + + ++
Sbjct: 274 KLIRPRGLKNGGNMCFMNAILQPLIHCPPFYNFLKMYENIFKHSFKSTTPLIDSMLQLLN 333
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+F + I + + + P + E V + + S + RQEDA+EFL F+
Sbjct: 334 EFK-----EEEPNTIPLPPATKDYRPFVGEYVY-DVLRKSKHIESQKGRQEDAEEFLGFL 387
Query: 315 MDQMHDELLKLQG------ESTSINGANTALVSLAEE------------------DEWET 350
++ +H+ELL++ ES S++ + +A + D W
Sbjct: 388 LEGLHEELLRVDNAQEKARESRSMDSHRLSNGMIAPQTTSPTRGAIVDGECTITADTWME 447
Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
VG K K TRT +A++ IFGGQ++S VK+ G+K S T +PF L LDI S V+T
Sbjct: 448 VGKKKKVQPTRTVQVKTTAIARIFGGQMRSAVKSFGSKDSTTSEPFQALQLDITSPTVNT 507
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-K 469
IEDALR + PE +EGY TSS A K ++ L +LILHL RF Y S G T K
Sbjct: 508 IEDALRELTLPEVIEGY-TSSEHPDVSSNATKQTFLEVLPAVLILHLKRFVYDSVGGTLK 566
Query: 470 LHKSVRFPLQLVLGRDLL---VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQW 526
+ K + + +L + D+L V + KY L A V HHG+ + GHYT D N+ W
Sbjct: 567 VSKHIAYSTELKISTDILAPSVRATQNNTKYHLFAIVNHHGKRAAGGHYTCDVLRQNESW 626
Query: 527 LHFDDASVTAIGTSKVLHD----QAYVLFY 552
LH DD+ ++ V + Q Y+LF+
Sbjct: 627 LHIDDSDISMTTAKAVTSERRDGQPYMLFF 656
>gi|449547151|gb|EMD38119.1| hypothetical protein CERSUDRAFT_113250 [Ceriporiopsis subvermispora
B]
Length = 872
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 196/396 (49%), Gaps = 52/396 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--------YPTLTAFV 250
L PRGL+N+GN+CF NA LQ L+ C PF +L ELR AG P + A
Sbjct: 484 LRPRGLVNTGNMCFANAVLQILVYCPPFHKLFSELRKYLSSPAGAQKDRSQATPLVDATT 543
Query: 251 GFVSDF--------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK---NFTPDVPNSIS 299
F+ +F ++ G ++++ LD F P+ V+K F N I
Sbjct: 544 QFLKEFLPEVPDPAESRGKGKEREEDFDELDS---FIPTYVYDVMKEKKRFA----NMIG 596
Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-WETVGPKNKSA 358
G QEDA+EFL F +D + +ELL L S S A++DE W VG KN++
Sbjct: 597 GH--QEDAEEFLGFYLDTLEEELLSL-ANSLSAGAPAAPEREEAQQDEGWHEVGKKNRAV 653
Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
+TRT S ++ IFGG+ +S + A + S V+ + L LDI E V TI+DALR
Sbjct: 654 LTRTVKSTESPITRIFGGKFRSTLSAPRQRESVIVEDWRSLRLDIQREQVSTIQDALRHI 713
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRF 476
S P+ ++ TS T ++ A + I+ L IL+LHL RF Y + K+ K + F
Sbjct: 714 SDPQPVQ--ITSPTQPGVIIDATQQALIEALPPILVLHLKRFLYDTSIGDVVKVGKQIAF 771
Query: 477 PLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFN--------DQ 525
+L + D L++PS + KY+L A + HHG S GHYT D + N
Sbjct: 772 TPELDVTPD-LISPSRKATHPVKYQLFAVLYHHGLSASGGHYTLDVLHPNRGLSERPRPG 830
Query: 526 WLHFDDASVTAIGTSKVL----HDQ--AYVLFYKQV 555
W+ DD V+ I V H+ AY+LFY++V
Sbjct: 831 WIRIDDELVSDIRNEDVFGGLDHNDRCAYLLFYRRV 866
>gi|407918479|gb|EKG11750.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 878
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 189/370 (51%), Gaps = 35/370 (9%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
+ PRGL+N+GN+C++N+ LQ L+ C PF L ++ R K+ P L A + F+ +F
Sbjct: 414 IEPRGLVNTGNMCYMNSILQTLVFCIPFYNFLDQVGKRAAYSFKSETPLLDAMIMFMREF 473
Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDAQE 309
S++ K+ + G F P V+K +P S R Q+DA+E
Sbjct: 474 PIIDSADSEEQLRLRLKDTELEKYGDAFIPEFVYDVIKR----LPRFSHMRRGHQQDAEE 529
Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDE---WETVGPKNKSAVTRTQ 363
FL FI+ +HDE ++K S S T+ S E D+ W VGPK K +VTR+
Sbjct: 530 FLGFILAGLHDECGHIMKSAPASASTTTEPTS-PSGTEPDQAEGWLEVGPKQKPSVTRSS 588
Query: 364 SFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+ S ++ IFGG +S ++A G K S T +PF L LDI + V+ I DA++ + P
Sbjct: 589 GTVGSETPITKIFGGMFRSEIRAPGEKPSITKEPFQPLQLDIGAPHVNNIVDAMKALTRP 648
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 480
E ++ Y++S N + A K V I TL +LILHL RF Y + G T K+ K V +PL L
Sbjct: 649 EPVD-YKSSRGPN---IMAMKQVFIDTLPSVLILHLKRFQYDNTGGTQKIWKKVGYPLDL 704
Query: 481 VLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 532
L +++ G KY L + HHG+ S GHYT D R + +W+ DD
Sbjct: 705 ELPKEVFPQHKRPGLSVKGGEPKYRLTGVIYHHGKTASGGHYTVDVRRQDGREWIRMDDT 764
Query: 533 SVTAIGTSKV 542
+ I + V
Sbjct: 765 ILRRIRSEDV 774
>gi|328715698|ref|XP_001946389.2| PREDICTED: hypothetical protein LOC100160238 isoform 3
[Acyrthosiphon pisum]
gi|328715700|ref|XP_003245698.1| PREDICTED: hypothetical protein LOC100160238 isoform 2
[Acyrthosiphon pisum]
Length = 922
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 199/385 (51%), Gaps = 43/385 (11%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-------TRDIPKAGYPTLTAFVG 251
L PRGL N C++NATLQAL++C PF L++ ++ R K+ P L + V
Sbjct: 537 LQPRGLTNRNTRCYINATLQALLTCPPFFNLMRSVQFKLKNRNNRGPQKSQTPILESMVQ 596
Query: 252 FVSDFDTPS---GGSSKKKNIS-------VLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 301
F+ +F S G +++++ + D G F PS +L F G
Sbjct: 597 FIGEFQQLSIKNGRTTQQQRQATSVATQETPDTGPAFEPSYVYKILPAFE-------EG- 648
Query: 302 PRQEDAQEFLSFIMDQMHDELLKL--QGESTSINGANTALV-SLAEEDEWETVGPKNKSA 358
RQEDA+EF+S++++ ++DE+++L +S NG A V ++ +EW+ V K+K
Sbjct: 649 -RQEDAEEFMSYLLNGINDEMIELIKMSKSNISNGETQAEVDAIDNNNEWKEVNGKHK-M 706
Query: 359 VTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
VTR + LS+IF GQL++ VK N+ + ++PF L LDI E ++ +AL +
Sbjct: 707 VTRRTVMEKTPLSEIFRGQLRTRTVKNGENEPTENIEPFFTLKLDI--EKAKSVREALDM 764
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
+ LEG T + A + V I L +L+LHL F Y Q TK+ K+V F
Sbjct: 765 LVNKDTLEGLTCPKTNRE--LDAYQQVTIDELPYVLLLHLKCFEYKQQKLTKIVKNVEFS 822
Query: 478 LQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
+ L + L+ S + R+Y+L A V H G++ +KGHY AD Y +WL FDDAS
Sbjct: 823 VDLKIEPRLISKNSKINMKTRQYKLFAVVYHDGKEANKGHYFADVFYVALGRWLRFDDAS 882
Query: 534 VTAIGTSKVLHDQ----AYVLFYKQ 554
V + +V + Y+L+Y++
Sbjct: 883 VRFVTDKEVCQPKPPCMPYLLYYRR 907
>gi|19113320|ref|NP_596528.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe
972h-]
gi|24638294|sp|O94269.1|UBP3_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 3;
AltName: Full=Deubiquitinating enzyme 3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|3810845|emb|CAA21806.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe]
Length = 512
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 216/455 (47%), Gaps = 84/455 (18%)
Query: 151 SPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNL 210
SP+ K H + + + NSS+ E +++ P + + PRG IN+GN+
Sbjct: 89 SPVKKSHSVP---VPSDRSEKKSFNSSLGELIETYSPSLDAP----RPIQPRGFINTGNI 141
Query: 211 CFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
CF+N+ LQALM C PF LL+++ R +P + P + + DF
Sbjct: 142 CFMNSILQALMYCVPFYNLLKQI-NRMVPYNFERTTPLIESLTMLSRDF----------- 189
Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPR--------QEDAQEFLSFIMDQM 318
R +S F+ + P+V S + G PR QEDA+EFL+ +D++
Sbjct: 190 --------REYS-EKFDLQGDSILPEVVYSATKGNPRFEMLQTGEQEDAEEFLNLFLDEL 240
Query: 319 HDELLK------LQGESTSI-------NGANTALVSL-----AEEDEWETVGPKNKSAVT 360
H+E ++ L+ + + NG + L S E W VG K +
Sbjct: 241 HEEFVRERRHYLLKNDERNPKSDIKISNGIKSGLDSFDDQSSVEASGWTEVGKNKKPVIA 300
Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
R+ + S +S IFGGQL+S ++ + S ++PF L LDI +E +H++ DAL +A
Sbjct: 301 RSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTA 360
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQ 479
PE L + SS GN VTA K + I++L +LILHL RF Y + G T K +K + +P +
Sbjct: 361 PEILPEWH-SSKGN---VTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPAR 416
Query: 480 LVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVT 535
L + +++ +PS G +Y+L A V HHG S GHYT D + + W DD +
Sbjct: 417 LSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIH 475
Query: 536 AIGTSKVLHDQ----------------AYVLFYKQ 554
+ V + + AY+LFY +
Sbjct: 476 RVPIHDVENSELSADPSLSKLGHGDRVAYLLFYTR 510
>gi|336367502|gb|EGN95847.1| hypothetical protein SERLA73DRAFT_162553 [Serpula lacrymans var.
lacrymans S7.3]
Length = 676
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 197/402 (49%), Gaps = 55/402 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL------RTRDIPKAGYPTLTAFVGF 252
+ PRGLIN+GN+CF NA LQ L+ C PF +L EL K P + A V F
Sbjct: 277 IRPRGLINNGNMCFANAVLQVLVYCPPFWRLFTELGRFLGENGTQEEKTKIPLVDATVQF 336
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR-------- 303
+ +F + K K + D G + E +F P V +++ + +
Sbjct: 337 LKEFQPKASVQGKGKGVE-RDYG--YREDQEEDGFDSFLPTHVYDAMKEKKQFDHMRGGH 393
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE--------WETVGPKN 355
QEDA+EF F +D + +ELL + + A + E +E W VG +N
Sbjct: 394 QEDAEEFFGFYLDTLEEELLSIVSSISPATSKPNAHAHVEEREEAAPPPESGWLEVGRRN 453
Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
K+ VTRT S ++ IFGG+ +S ++A K S V+ + L LDI E ++TI+DAL
Sbjct: 454 KTVVTRTIKTAESPITRIFGGKFRSTLRAPQQKDSVIVEDWRSLRLDIQREQIYTIKDAL 513
Query: 416 RLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHK 472
SAP++++ +S GVV A + V+I+ L IL+LH+ RF Y + G K+ K
Sbjct: 514 AYISAPQSVQ---VTSPARPGVVIDASQLVQIEALPPILVLHMKRFLYDMNAGGVAKVGK 570
Query: 473 SVRFPLQLVLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFN---- 523
V F +L +G D++ A GRK Y+L + HHG S GHYT D + N
Sbjct: 571 QVSFGPELEIGPDIM----APGRKVQPTRYKLFGVLYHHGLSASGGHYTLDVLHPNRDMS 626
Query: 524 ----DQWLHFDDASVTAIGTSKVL-----HDQ-AYVLFYKQV 555
+ W+ DD V+ + V D+ AY+LFY+++
Sbjct: 627 TKPREAWIRIDDELVSDVRAEDVFGGLERDDRCAYLLFYRRL 668
>gi|302913332|ref|XP_003050898.1| hypothetical protein NECHADRAFT_41715 [Nectria haematococca mpVI
77-13-4]
gi|256731836|gb|EEU45185.1| hypothetical protein NECHADRAFT_41715 [Nectria haematococca mpVI
77-13-4]
Length = 920
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 191/369 (51%), Gaps = 51/369 (13%)
Query: 199 LLPRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
L PRGLIN+GN+C++N+ + +A+ S K+ P + A + F+ +F
Sbjct: 491 LEPRGLINTGNMCYMNSISKRAVHSF----------------KSETPLIDAMIMFMHEFK 534
Query: 258 TPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
SS + KN + G PF+P ++EA+ + +P S R Q+DA+E
Sbjct: 535 IIKSASSVEPLRRSLKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEE 589
Query: 310 FLSFIMDQMHDELLKLQGEST---SINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SF 365
FL F++ + DE + ST AN A + D+W VG K K+AVTR+ S
Sbjct: 590 FLGFLLQSLDDECTSVMNSSTLAEQSEKANAAEGAAGTSDDWLEVGRKQKAAVTRSAGSN 649
Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
S +S IFGG L+S + G K S T +P+ L LDI S V + DALR + PE ++
Sbjct: 650 SSSPISKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERIQ 709
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 483
G S G VTA K V I++L +LILHL RF + ++ G+ K+ K + +PL+L +
Sbjct: 710 GDFNSPRGKD--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 767
Query: 484 RDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
RD+L S + R KY+L++ V HHG++ S GHYT D R +W+ DD
Sbjct: 768 RDVL---SRQKRQTYTDGAMPKYKLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTV 824
Query: 534 VTAIGTSKV 542
+ + + V
Sbjct: 825 IRRVRSEDV 833
>gi|302830983|ref|XP_002947057.1| hypothetical protein VOLCADRAFT_120420 [Volvox carteri f.
nagariensis]
gi|300267464|gb|EFJ51647.1| hypothetical protein VOLCADRAFT_120420 [Volvox carteri f.
nagariensis]
Length = 2032
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 175/330 (53%), Gaps = 40/330 (12%)
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-------------RQE 305
PS G S VL G+P PSM + F P + SI+ + Q+
Sbjct: 1700 PSSGPSASGKEVVLG-GQPLVPSMLSGIAAAFNPRI--SIAEKQTMAKVLSKSVVEQEQQ 1756
Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA----EEDEWETVGPKNKSAVTR 361
DAQEF F+++++H+E+L L+ A S A + +EW VG KNK+ VTR
Sbjct: 1757 DAQEFFQFLVNRVHEEVLGLRKAHGLAAAPAAASASAAGGSDDGEEWSQVGRKNKATVTR 1816
Query: 362 TQSFLP-------SALSDIFGGQLKSVVKAQ----GNKASATVQPFLLLHLDIYSEAVHT 410
Q P S ++ IF G +KS ++ Q K SAT++ F +LHLDI +E V+T
Sbjct: 1817 -QVGTPADDASSRSPVTAIFSGLVKSTIRFQQPHANYKPSATIEVFNMLHLDIAAEGVNT 1875
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--- 467
+EDALR S PEN+E Y+ G + ++ AKK V++ L ++L+LHL RF+Y + G
Sbjct: 1876 LEDALRHHSVPENIE-YKPE--GASEMLPAKKDVRLYRLPEVLVLHLKRFTYTAAGGGHY 1932
Query: 468 TKLHKSVRFPLQLVLGRDLLV--TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
TKL KSV F L L +L P +Y L AT+ HHGR + GHY AD + +
Sbjct: 1933 TKLQKSVAFNCLLRLEGKVLAEDCPDRANAEYRLFATINHHGRSIAGGHYIADVQQPDGC 1992
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
WL F+D V + VL ++ Y+LFY++V
Sbjct: 1993 WLRFNDEHVLLVSEGDVLRERPYLLFYQRV 2022
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL 233
+LPRGL N+GN CF+NAT+QAL++C+PF +L L
Sbjct: 1576 ILPRGLKNTGNTCFINATMQALLACAPFASVLSRL 1610
>gi|388855962|emb|CCF50537.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Ustilago
hordei]
Length = 901
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 202/447 (45%), Gaps = 108/447 (24%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF- 256
PRGL+N GN CF NA LQ L+ C+PF L L R +P P + A + F+ +F
Sbjct: 363 PRGLVNKGNFCFANAILQTLVYCAPFYNLFN-LIARQVPADFGNATPLMEAVIHFLREFL 421
Query: 257 --------DTP---SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
D+P GGS+ + +L +++A+ N D R QE
Sbjct: 422 PADAANAIDSPFPGHGGSAAAASEPILP------EYVYDAMRLNKRFDQMR----RGHQE 471
Query: 306 DAQEFLSFIMDQMHDELL----------------------KLQGESTSING--------- 334
DA+EFL F +D +H+EL+ K+ E +NG
Sbjct: 472 DAEEFLGFFLDTLHEELIAAQRKSAIKLAQSAGGPNGLLAKMSEEEKKLNGVSDDDLRRL 531
Query: 335 ---------ANTAL---------------------VSLAEEDEWETVGPKNKSAVTRTQS 364
A AL VS +EE W VG K K+A TRT S
Sbjct: 532 GVRVGKQGAAGDALGLDLEAVLDENEIIEREVMRPVSPSEEG-WMEVGQKGKTAYTRTTS 590
Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
S ++ IFGG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE +
Sbjct: 591 TSESPITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALFHLNEPETI 650
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLG 483
G + S G V A K V I++L +L+LHL RF Y G K K + + L +
Sbjct: 651 PGVWSPSRG--AEVDATKQVFIESLPPVLVLHLKRFIYDEIGGVQKSQKPLSYGTTLEIA 708
Query: 484 RDLLVTPS--AEGR-KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGT 539
++L +P+ A+GR +Y L V HHGR S GHYT D R WLH DD + T
Sbjct: 709 PEVL-SPAMRAQGRPRYRLFGIVYHHGRYASGGHYTVDVLRQDGHSWLHIDDTLYHTVPT 767
Query: 540 SKVL-----------HDQ-AYVLFYKQ 554
V+ HD AY+LFY++
Sbjct: 768 EHVVRNAASPVKDYGHDGLAYLLFYRR 794
>gi|343424851|emb|CBQ68389.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Sporisorium
reilianum SRZ2]
Length = 919
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 191/441 (43%), Gaps = 99/441 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDFD 257
PRGL+N GN CF NA LQAL+ C+PF L L R++P P + A + F+ +F
Sbjct: 378 PRGLVNKGNFCFANAILQALVYCAPFYNLF-SLVGREVPADFGNATPLMEAVIHFLREFH 436
Query: 258 TPSGGSSKKKNISVL--DIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
GSS + L D PF P +++A+ N D R QEDAQEFL F
Sbjct: 437 PVHTGSSHALDSPQLAHDASEPFVPEFVYDAMRLNKRFDQ----MRRGHQEDAQEFLGFF 492
Query: 315 MD-----------------------------QMHDELLKLQG---------------EST 330
+D M DE KL G + +
Sbjct: 493 LDTLHEELISAQRRSAIKLAHSAGGPNGLLANMSDEDKKLNGVSDDDLRRLGVRVGKQDS 552
Query: 331 SINGANTALVSLAEEDE----------------WETVGPKNKSAVTRTQSFLPSALSDIF 374
+ + L S + DE W VG K K+A TRT S S ++ IF
Sbjct: 553 AADAIGLGLDSAFDPDEIVEREVLRPVSPSEEGWMEVGQKGKTAYTRTTSTSESPITRIF 612
Query: 375 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
GG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE + G + S
Sbjct: 613 GGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPEIIPGVWSPS--R 670
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP---- 490
A V A K V +++L +L+LHL RF Y G + + P L G L + P
Sbjct: 671 AAEVDATKQVFVESLPPVLVLHLKRFIYDEIGGVQ-----KSPKPLSYGTTLEIAPEVLS 725
Query: 491 ----SAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVL-- 543
S +Y L V HHGR S GHYT D R WLH DD I T V+
Sbjct: 726 PTMRSQPRPRYRLFGIVYHHGRYASGGHYTVDVLRQDGHSWLHIDDTMFHTIPTEHVVRN 785
Query: 544 ---------HDQ-AYVLFYKQ 554
HD AY+LFY++
Sbjct: 786 AASPSRDYGHDGLAYLLFYRR 806
>gi|384248322|gb|EIE21806.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 282
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 160/259 (61%), Gaps = 16/259 (6%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--EEDEWETVGPKNKSAVT 360
+QEDAQEFL F++D H+ELL+L+ + G N A S A +++EW G K
Sbjct: 29 QQEDAQEFLGFLLDSAHEELLRLRLLHAASLG-NPAEGSEAGGDDEEWLMAGRSKKKKAG 87
Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
T + S +FGG L+S VKA G ASAT++P ++HLDI +AV ++ DAL F++
Sbjct: 88 GT-----TLASAVFGGALRSEVKAAGAPASATLEPCFVVHLDIQPDAVRSVSDALHAFTS 142
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
PE + GY+ N+ VTA+K V++ L +IL+LHL RFSYG G+ K+HK+V + +L
Sbjct: 143 PETISGYKVRD--NSEGVTARKVVQLYALPRILVLHLKRFSYGLTGTGKIHKTVHYGDRL 200
Query: 481 VLGRDLLV--TPSAE---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
+ + P A G Y+L+A V HHGR P+ GHYTAD R + +WL FDDA +
Sbjct: 201 RVQPSWMAEGCPDARHRGGADYDLIAVVHHHGRTPAAGHYTADVRQPDGKWLRFDDADLM 260
Query: 536 AIGTSKVLHD-QAYVLFYK 553
++ ++V+ D +AY+LFY+
Sbjct: 261 SVPLARVVDDNKAYLLFYQ 279
>gi|440795054|gb|ELR16195.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 649
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 179/361 (49%), Gaps = 61/361 (16%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
RGL N GN CFLNAT+Q L++C PF+ L+ LR R +P V F F+
Sbjct: 330 RGLHNEGNTCFLNATVQCLLACPPFIGFLRSLRGRGLP----------VRFAEAFEL--- 376
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMHD 320
KK N ++ + + + F AV+K ++G P RQEDA EFLS ++D +H+
Sbjct: 377 --EKKANTQLVPLA---AKAHFAAVIKK--------LAGTPGRQEDAHEFLSLLLDTVHE 423
Query: 321 ELLKLQGES-----TSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
EL ++ + +GA+ + E +EW VG KNK++ RT F +A++ IFG
Sbjct: 424 ELRAGSAKARAGGGSGESGAHHKTAAHNETNEWNEVGRKNKTSKLRTAEFEDTAVTRIFG 483
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
+L+S +K++G K S T + F L LD+ + +++DAL F + E+L+
Sbjct: 484 CKLRSCLKSRGAKQSITQELFNALPLDVSVHQIRSLDDALLGFMSAESLDWE-------- 535
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
V A K K + + +L++HL RF++ + G K+ K + E R
Sbjct: 536 --VRASKEYKFERMPGVLVVHLKRFAFSAAGGDKIAKHI---------------DEKERR 578
Query: 496 KYELVATVTHHGRDPSKGHYTA----DARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y+L V HHG GHYTA D ++ H DD ++ VL QAY+LF
Sbjct: 579 SYDLFGVVEHHGHTLQSGHYTASIKRDQHWYYYYPYHVDDTTINPTTIQTVLRRQAYLLF 638
Query: 552 Y 552
Y
Sbjct: 639 Y 639
>gi|196004276|ref|XP_002112005.1| hypothetical protein TRIADDRAFT_55609 [Trichoplax adhaerens]
gi|190585904|gb|EDV25972.1| hypothetical protein TRIADDRAFT_55609 [Trichoplax adhaerens]
Length = 624
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 180/367 (49%), Gaps = 29/367 (7%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT-----RDIPKAGYPTLTAFVGFVSD 255
PRGL N + CF+N+TLQ+L+ CSP + L+++ + + I P + FV+
Sbjct: 230 PRGLTNKASFCFINSTLQSLLVCSPIHRALRKIGSFPTLQQTIGDCRTPAINGMAAFVNQ 289
Query: 256 FDTPSGGSSKKKNISVLDIGR------PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
FD +K +L G+ PF P +L P S++ RQEDA+E
Sbjct: 290 FDLLERQEYEKTFGKLLKAGKEVRFDNPFEPQCIYEMLAILRP----SMAKGERQEDAEE 345
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSL----AEEDEWETVGPKNKSAVTRTQSF 365
FL ++D +H+E++ + E +S + + + + + EW+ K KSA++RT +
Sbjct: 346 FLGCMLDNLHEEIVSISPEKSSASDQASCENDIDNINSGDGEWQQALSKKKSAISRTIAQ 405
Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
S +S+ FGG+++S +K K S T QPF L LDI+ + I+DA++ E +E
Sbjct: 406 NHSLISETFGGEIRSSIKYTNEKQSNTSQPFFTLQLDIHDSEISHIKDAIKKSMGSEQVE 465
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
Y + + G V A K + + L KILILHL RF + KL K V + LQL + ++
Sbjct: 466 HYISGNDGKKTKVEATKKMSFERLPKILILHLKRFIFDHGICQKLTKDVNYDLQLEIDKE 525
Query: 486 LLVTPSAE----GRKYELVATVT-----HHGRDPSKGHYTADARYFN-DQWLHFDDASVT 535
LL + G +L HHG + GHYT DA + + +W+ DD
Sbjct: 526 LLSRECKQSLNVGELKKLTIVTIVVVVFHHGLRAAGGHYTCDAYHASFKRWIRHDDTMAK 585
Query: 536 AIGTSKV 542
I ++
Sbjct: 586 TISDKEL 592
>gi|429849220|gb|ELA24624.1| ubiquitin c-terminal hydrolase [Colletotrichum gloeosporioides Nara
gc5]
Length = 906
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 190/374 (50%), Gaps = 40/374 (10%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFV 253
V+ + PRGLIN+GN+C++N+ LQ L+ C PF L ++ R + K+ P + A + F+
Sbjct: 455 VQFIEPRGLINTGNMCYMNSVLQVLLFCIPFYDFLDQVSKRAVHKFKSDTPVIDAMIMFM 514
Query: 254 SDF------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
+F D+ K KN + G F P E V K P + R Q+DA
Sbjct: 515 REFRVIDSTDSVEKLRKKLKNEQLEQYGDSFIP---EFVYKAIQPLPAFASMRRGHQQDA 571
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGA-----NTALVSLAEE----DEWETVGPKNKSA 358
QEFL I++ + +E ++ T+ NGA ++ S+AE D W VG + ++
Sbjct: 572 QEFLGLILNAIDEECAQVMSSGTA-NGAPEVRPTSSAASVAESQDGVDGWFEVGSRQRAV 630
Query: 359 VTRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
TR+ + ++ +F GQ +S ++ G K S T +PF L LDI + ++ + DA++
Sbjct: 631 ETRSSGGSQTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPYINNVVDAIKG 690
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
+ PE L+ G+A +T K I+TL ILILHL RF + ++G+TK+ K V +
Sbjct: 691 LTLPERLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKIGKKVGYA 741
Query: 478 LQLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLH 528
L L L R+ LV A KY L V HHG+ + GHYT D R ++ +W+
Sbjct: 742 LDLQLPAEVLSKRRRNALVAEGAGMPKYRLTGVVYHHGKQANGGHYTVDVRRQDENEWIR 801
Query: 529 FDDASVTAIGTSKV 542
DD + + + V
Sbjct: 802 LDDTVIRRVRSEDV 815
>gi|405119403|gb|AFR94176.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1109
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 217/486 (44%), Gaps = 113/486 (23%)
Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD---------------LLPRGLINSGNLCFLNA 215
AAA SS+ E +K ++E V S++ ++PRGLIN+GN+CF N
Sbjct: 635 AAAAMSSVPSPHEELIKLLSEGVSSLRGTGATVGLSVKEKEALMVPRGLINTGNMCFANT 694
Query: 216 TLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF-----------DTPSG 261
LQ L+ C PF +L +E R D+ + P L A + F+ +F TP G
Sbjct: 695 ILQVLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIVFLREFVSSPEPSTSTTSTPKG 753
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
K + I ++++A+ +N D R QEDA+E+L F ++ +H+E
Sbjct: 754 KGKDKDSRKEAFIPE----NVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEE 805
Query: 322 LLKL----------------------QGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
++ L + E GA + W VG K K+ V
Sbjct: 806 IIYLLSRTSTTSSSIPNGQPSDSSSREVERPVSPGAAGINGNADSSSGWLEVGKKQKTHV 865
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
R SA+S +FGG+L+S++ G K S T++P+ L LDI + A+ +I DALR S
Sbjct: 866 VRATESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITAPAILSITDALRAIS 925
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
PE + G +++ G G V A K+V ++T K+LI HL RF Y ++ G K K+V +
Sbjct: 926 TPEIIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYG 983
Query: 478 LQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTAD-AR------------- 520
+ L + + +++P+ KY L V HHG S GHYT AR
Sbjct: 984 VDLAIPNE-IISPARRTSTPIKYALFGVVYHHGSSASGGHYTVSVARPSSSSSSSTPSTS 1042
Query: 521 --------------YFNDQWLHFDDASVTAIGTSKVL--HDQ---------------AYV 549
+WLHFDD +V + V+ DQ AY+
Sbjct: 1043 VQSPVGASSPSSISSATSRWLHFDDENVREVREDDVVVSMDQAKGGESGSVGGREKCAYL 1102
Query: 550 LFYKQV 555
LFYK+V
Sbjct: 1103 LFYKRV 1108
>gi|213405707|ref|XP_002173625.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212001672|gb|EEB07332.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 524
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 190/384 (49%), Gaps = 42/384 (10%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLTAFVGFVS 254
++ PRG +N+ N+CF+N+ QAL+ C PF L++ L + +P+ L + +
Sbjct: 156 NIQPRGFVNTSNMCFMNSIFQALLYCVPFYVLMRNL-GKKLPRLFRDKGSLLGSVITLTQ 214
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+F ++ G + P + V+KN P +G QEDA+EFL+
Sbjct: 215 EFRENWQPGEEE--------GDAYIPEVVYRVMKN-NPRFDLVQTGE--QEDAEEFLNLF 263
Query: 315 MDQMHDELLK---LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+D+MH+E ++ L+ S+ A EE+ W VG K K +TR+ + S ++
Sbjct: 264 LDEMHEEFVRTGNLEKASSPNADAVDKDKEDKEEEGWLEVGKKQKPVITRSATVSHSPIT 323
Query: 372 DIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
+IFGGQL+SV+K + S ++P+ L LDI + +H++ DA+ + PE L+G+R+
Sbjct: 324 EIFGGQLRSVLKVPNARDSVLLEPYQPLPLDIQPDHIHSVLDAMDHLTTPETLKGWRSP- 382
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLV- 488
VTA K V I+ L +LILHL RF Y Q G+ K K + +PL+L + ++
Sbjct: 383 --KGHTVTATKQVFIEKLPAVLILHLKRFLYDDQAGGTLKNTKLISYPLRLEIPTRVISP 440
Query: 489 --TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLHD 545
P R Y+L A V HHG GHYT D + W+ DD ++ I S V
Sbjct: 441 GKRPLGPAR-YQLTAVVYHHGLSAQGGHYTVDVHQHDGSSWIRIDDTTIRTISESDVEVT 499
Query: 546 Q--------------AYVLFYKQV 555
+ AY+LFY +
Sbjct: 500 ENEATVNSSASSDRCAYLLFYTRC 523
>gi|170109677|ref|XP_001886045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638975|gb|EDR03249.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 949
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 196/406 (48%), Gaps = 58/406 (14%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPKAG--------YPTLTAFVGF 252
RGL+NSGN+CF N+ LQ L+ C+PF QL EL R P G P + A V F
Sbjct: 550 RGLVNSGNMCFANSVLQILVYCAPFYQLFGELGRVMPEPVVGKESQSQKEQPLVAATVAF 609
Query: 253 VSDF---DTPSGGSSKKKNI----------SVLDI--GRPFSPS-MFEAVLKNFTPDVPN 296
+ +F D G ++ ++ LD G F PS +++A+ + D N
Sbjct: 610 LKEFKGKDVVGAGGARNGSVGRKGKEREEREQLDDWDGDSFLPSYVYDAMKEKKRFD--N 667
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE------EDEWE 349
G QEDA+EFL F +D + +ELL L S S A A V E +D W
Sbjct: 668 MRGGH--QEDAEEFLGFYLDTLEEELLSILHSVSPSRQKAAPAPVEEKEEAAPPEQDGWL 725
Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
VG +N++ VTRT S ++ IFGG+ +S ++A K S V+ + L LDI E +H
Sbjct: 726 EVGKRNRTVVTRTIKATESPITRIFGGKFRSTLRAPRQKDSVIVEDWRSLRLDIQREQIH 785
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GS 467
TI+DAL S P+ ++ S G + A + V I L ILILH+ RF Y + G
Sbjct: 786 TIQDALSYISHPQPVQVTHPSQPGI--TIDATQQVLIDALPPILILHIKRFCYDTTVGGV 843
Query: 468 TKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-- 523
K+ K V F +L +G DL+ T + KY+L + HHG S GHYT D + N
Sbjct: 844 VKVGKQVLFGPELEIGPDLMSTTVRKSHPTKYKLFGALYHHGHSASGGHYTLDVLHPNRY 903
Query: 524 -------DQWLHFDDASVTAIGTSKVL-------HDQAYVLFYKQV 555
+ W+ DD V+ + V AY+LFY+++
Sbjct: 904 PGATKSREGWVRIDDELVSDVRYEDVFGVSERDDSRCAYLLFYRRI 949
>gi|164657422|ref|XP_001729837.1| hypothetical protein MGL_2823 [Malassezia globosa CBS 7966]
gi|159103731|gb|EDP42623.1| hypothetical protein MGL_2823 [Malassezia globosa CBS 7966]
Length = 540
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 191/430 (44%), Gaps = 99/430 (23%)
Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF 256
+P GL+N GN CF +A LQ L+ C P L +LR +P+ P L A F S+
Sbjct: 132 VPVGLVNQGNSCFASAVLQMLVFCRPLYMFLTQLRMM-VPQDLSNSTPLLEAIFRFYSEI 190
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR------------Q 304
S ++ V K+ P +P+ I R Q
Sbjct: 191 PV-------------------VSKQLYGLVEKSVDPILPDYIYDAMRLHKRFDLFQLGHQ 231
Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--------------------- 343
EDA+EFLS I+ +H+E++ + + ++ +L A
Sbjct: 232 EDAEEFLSLILSTLHEEVVLVFARAMQRKKSSASLQQRAPKKSVAMGDPYAAYPPPMESD 291
Query: 344 -------------------EEDEWETVGPKNKSAVTRT--QSFLPSALSDIFGGQLKSVV 382
E+DEW VG K ++++TRT + S ++ +F G+L+S +
Sbjct: 292 NSSDEEDILAMEVQRPPSPEQDEWLEVGQKGRTSLTRTSGNTDTHSPVTRMFDGKLRSTL 351
Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 442
G K S V+P+ L LDI S VHTIEDALR + PE + G S V A K
Sbjct: 352 SCPGAKTSVMVEPYRSLPLDIQSSHVHTIEDALRHITEPELISG--VWSPQRNAYVDATK 409
Query: 443 SVKIQTLSKILILHLMRFS----YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG---R 495
V+I+ L +L+LHL RF YG Q ST K + F + L + D+L TP
Sbjct: 410 QVRIEALPPVLVLHLKRFVFDEFYGVQKST---KPIHFGMSLEISPDILSTPCRRACSLT 466
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVL--------HD- 545
KY L V HHGR S GHYT R +D W+H DD + I +V+ H+
Sbjct: 467 KYALFGVVYHHGRLASGGHYTVAVRRQDDSGWIHIDDTYASQISAEEVMFTGHRSSTHNG 526
Query: 546 QAYVLFYKQV 555
QAY+LFY++V
Sbjct: 527 QAYLLFYQKV 536
>gi|395333867|gb|EJF66244.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 925
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 199/401 (49%), Gaps = 57/401 (14%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR----------TRDIPKAGYPTLTA 248
+ PRGL+N+GN+CF NA LQ L+ C PF + +L+ R+ KA P + A
Sbjct: 529 IRPRGLVNTGNMCFANAVLQILVYCPPFHRFFSDLKKHLAGPVVGSQREGSKAT-PLVDA 587
Query: 249 FVGFVSDF--DTPS-----------GGSSKKKNISVLDIGRPFSPS-MFEAVL--KNFTP 292
+ F+ +F D P+ G + N LD F PS +++A+ K F
Sbjct: 588 TIQFLKEFVPDPPANANVNANMKSKGKEREDDNFDELDS---FIPSYVYDAMKEKKRFA- 643
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVG 352
N I G QEDA+EFL F +D + +ELL + +S A TA A +D W VG
Sbjct: 644 ---NMIGGH--QEDAEEFLGFYLDTLEEELLSI-SQSLQPQDAPTAPEEEAHDDGWLEVG 697
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
KNK+ TRT S ++ IFGG+ +S ++A + S T++ + L LDI E V T+
Sbjct: 698 KKNKAVATRTAKSTESPITRIFGGKFRSALRAPHQRESVTIEDWRSLQLDIQPENVKTLR 757
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKL 470
DAL S P+ ++ + G ++ A++ V I+ L +LILH+ RF Y ++ K+
Sbjct: 758 DALLHISQPQQVQISIPTRPG--ALLDAQQQVLIEALPPVLILHMKRFLYDTKVGDVVKV 815
Query: 471 HKSVRFPLQLVLGRDLL--VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ--- 525
K V F +L + +++ V + + KY+L + HHG S GHYT D + N +
Sbjct: 816 GKQVSFASELDVPPEIISQVKRTTQPVKYQLFGVLYHHGMTASGGHYTLDVLHPNRELSE 875
Query: 526 -----WLHFDDASVTAIGTSKVL------HDQAYVLFYKQV 555
W+ DD V+ + V Q Y+LFY+++
Sbjct: 876 RPRAAWIRIDDELVSDVRPDDVFGGQEREDRQPYLLFYRRM 916
>gi|198427145|ref|XP_002120858.1| PREDICTED: similar to ubiquitin specific peptidase 10 [Ciona
intestinalis]
Length = 714
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 193/392 (49%), Gaps = 50/392 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT----RDIPKAGYPTLTAFVGFVS 254
+PRGL N+ N C++NATLQAL+ C PF Q L+ + T P + +F+ S
Sbjct: 335 FIPRGLTNTSNWCYINATLQALLVCPPFYQFLKSISTFTPLSQKTVTCSPIIDSFLQLAS 394
Query: 255 DF---DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
+F T G +K+ + G PF P +L + +S+S + RQEDA+EF
Sbjct: 395 EFRPLSTKRGFVTKE-----VRHGPPFEPRYIYDMLTL----IKSSLSEKGRQEDAEEFQ 445
Query: 312 SFIMDQMHDELLKL-------------QGESTSINGANTA---LVSLAEEDEWETV--GP 353
S +++ +H+E+ +L + S + ++T+ + AE++EWE V
Sbjct: 446 SCVLNGLHEEMTQLFTYLNDSANSQSPESHSEQDDSSSTSEELMNGDAEKEEWEEVMATK 505
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
KNKSAVTR + +SD+F G+L + V G K S + +PF L L + ++ ++D
Sbjct: 506 KNKSAVTRRADDTRTPISDMFRGELCTSVFRPGQKVSVSYEPFFSLPLSVPADHACNVDD 565
Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHK 472
AL + E+ G A + +++L I ILHL RF Y S G K+ K
Sbjct: 566 ALMSLTDKESFLA------DGEGQSDASRQQTLESLPPIFILHLKRFVYDKSGGLKKIDK 619
Query: 473 SVRFPLQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
V + +V+G+++L S R Y+L A V HHG + GHYT D + WL
Sbjct: 620 KVEYKTDMVIGKEMLSKSARKLSINQRTYKLFAVVYHHGEKATGGHYTTDVFHIGLSSWL 679
Query: 528 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 555
DD ++ + ++V AY+L+Y+++
Sbjct: 680 RIDDQNIKTVHHTEVTRHNPSRTAYLLYYRRI 711
>gi|260949681|ref|XP_002619137.1| hypothetical protein CLUG_00296 [Clavispora lusitaniae ATCC 42720]
gi|238846709|gb|EEQ36173.1| hypothetical protein CLUG_00296 [Clavispora lusitaniae ATCC 42720]
Length = 933
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 206/442 (46%), Gaps = 96/442 (21%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG----YPTLTAFVGFV 253
++ PRGL NSGN+C++NA LQ L+ C PF +LL+ ++ + I G P L A + F+
Sbjct: 504 EVKPRGLTNSGNICYMNAVLQCLVMCEPFNKLLRHVQEKSIGTLGKTSPTPLLDATISFI 563
Query: 254 SDF-DTPSGGSSKKKNISVLD-----IGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQED 306
DF + PS S K N+S L+ +G+P SP S++ +++N P + G+ QED
Sbjct: 564 EDFINIPS---SSKPNVSSLNSEGIVVGKPLSPESLYMKLIEN--PKFKHLKWGQ--QED 616
Query: 307 AQEFLSFIMDQMHDEL--------------------------------LKLQGESTSING 334
A+EFL +++D +H+E LK++ + +
Sbjct: 617 AEEFLGYLLDGLHEEFVKAEASVSPEMLEMLYNKYSQSLDPHLAEQLKLKMKSGARLVRS 676
Query: 335 ANTALVSLAEEDE-----WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA 389
+ V +EE E W VG K R PS +++IFGG +SV+ K
Sbjct: 677 TESKEVEDSEESEGDHSGWSEVGSGKKVNKKRVMEVEPSPITEIFGGSFRSVLTVPKAKV 736
Query: 390 SA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQ 447
S T+ P+ + +DI + + TIEDAL + E + Y+ + V A+K I+
Sbjct: 737 SQSITIDPYRSIQVDISHKEIETIEDALLRITEVEKI-PYKIEA---GKEVIARKQSFIE 792
Query: 448 TLSKILILHLMRFSY------------GSQGST-----------KLHKSVRFPLQLVLGR 484
L ++LIL L RFS+ G Q S K+ K++++ L L +
Sbjct: 793 KLPQVLILQLKRFSFEHQQPQIATSENGEQDSKSISTHHIGTIEKVMKNIKYGLDLTVPL 852
Query: 485 DLL---VTPSAEGRKYELVATVTHHGRDPSKGHYTADA--RYFNDQWLHFDDASVTAIGT 539
+ L V P+ E R Y L+ V HHGR+ GHYT D +WL DD +V I
Sbjct: 853 ECLSSGVRPT-EKRDYRLIGVVYHHGRNAEGGHYTCDVLRNKREKKWLRIDDTAVETITA 911
Query: 540 SKVL------HDQAYVLFYKQV 555
V+ AY+L Y++V
Sbjct: 912 DMVVDVPDARDKSAYILMYQRV 933
>gi|116197711|ref|XP_001224667.1| hypothetical protein CHGG_07011 [Chaetomium globosum CBS 148.51]
gi|88178290|gb|EAQ85758.1| hypothetical protein CHGG_07011 [Chaetomium globosum CBS 148.51]
Length = 915
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 36/343 (10%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C PF L ++ + K+ P + A V F+ +F
Sbjct: 482 LEPRGLVNTGNMCYMNSVLQVLIFCVPFFDFLDQVSKKATHSFKSDTPLVDAMVMFMREF 541
Query: 257 ---DTPSGGSSKKKNISVLDI---GRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
D+ + KK + + G PF+P+ ++N +P S R QEDAQE
Sbjct: 542 KSIDSAASADQLKKRLKSEEYEKYGEPFTPAFVYEAIRN----LPRFASMRRGHQEDAQE 597
Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE-----DEWETVGPKNKSAVTR 361
FL F+++ +HDE +++ ST+ + S A E D+W VGP+ +SAVTR
Sbjct: 598 FLGFLLEGLHDECAQVMRAAPNSTASTAPPSPTSSRANESVEGTDDWLEVGPRQRSAVTR 657
Query: 362 T--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
+ S S ++ IFGG L+S + G K S T++P+ L LDI S V I DAL+ +
Sbjct: 658 SSGHSHTLSPINKIFGGHLRSEFRVPGKKNSVTLEPYQPLQLDIGSPEVRNIIDALKGLT 717
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHKSVRF 476
E L G S G V A K V I+++ +L+LHL RF + G G+ K+ K + +
Sbjct: 718 RSEVLHGDFNSPHGKD--VRATKQVFIESVPPVLVLHLKRFQFDAEGYGGTVKIWKKIGY 775
Query: 477 PLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPS 511
PL+ R++L + ++ +Y L++ + HHG++ S
Sbjct: 776 PLEFEFPREVLSRQTRNNILAGNSGAPRYRLISVIYHHGKNAS 818
>gi|443682890|gb|ELT87325.1| hypothetical protein CAPTEDRAFT_168563 [Capitella teleta]
Length = 383
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTAFVGFVS 254
+PRGL N GN C++NATLQAL++C PF L++ L D P + P + V FV+
Sbjct: 1 MPRGLHNKGNWCYVNATLQALLACPPFYHLMKSLP--DFPALARGPSSTPVIDCLVEFVN 58
Query: 255 DFDTPSGGSSKKKNISV-------LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
F T +K ++ + G PF P+ +L D RQEDA
Sbjct: 59 AFSTMQYKPLEKSALNAKGTVRQDIQTGIPFEPTYVYKMLHVIKNDTGFQ---HGRQEDA 115
Query: 308 QEFLSFIMDQMHDELLK----LQGESTS---------INGANTALVSLAEEDEWETVGPK 354
+EFLS +++ +HDE+L LQ S +NG E VGPK
Sbjct: 116 EEFLSCLLNALHDEMLASLQTLQPPSEELPPSDPVPEVNGDGEEQEEGWE-----QVGPK 170
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
NKS +TR F S +S + GQL+SV+ G + SAT++PF L LDI + + ++EDA
Sbjct: 171 NKSVLTREAKFKTSPVSAMMRGQLRSVLHKTGARESATLEPFFSLQLDIQGKDIRSVEDA 230
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH-KS 473
L ++ E L G+ S T V A + + ++ L +LILHL FSY G + + K
Sbjct: 231 LGGLTSRETLHGFTCSKTKQE--VDATQRLLLEELPPVLILHLKWFSYDKSGGIQKNVKQ 288
Query: 474 VRFPLQLVLGRDLLVTP-----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
V F L + +DLL ++ RKY+L A V H G GHY D + + W+
Sbjct: 289 VDFAADLEINKDLLSANAKSRLTSAQRKYKLFAVVNHLGGRAIGGHYITDVFHPGINSWV 348
Query: 528 HFDDASVTAIGTSKVLH----DQAYVLFYKQV 555
DD+ V ++ SKVL Y+L+Y+++
Sbjct: 349 RCDDSHVYSLPLSKVLKYVSPKVPYLLYYRRL 380
>gi|321264227|ref|XP_003196831.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317463308|gb|ADV25044.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1089
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 220/474 (46%), Gaps = 97/474 (20%)
Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD------------LLPRGLINSGNLCFLNATLQ 218
AAA SS+ E ++ ++E V S++ ++PRGLIN+GN+CF N LQ
Sbjct: 623 AAAAMSSVPSPHEDLVRLLSEGVSSIRGPVGLTAKEKEALMVPRGLINTGNMCFANTILQ 682
Query: 219 ALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF------DTPSGGSSKKKNI 269
L+ C PF +L +E R D+ + P L A + F+ +F T + + K K
Sbjct: 683 VLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIIFLREFVSSPESSTSTTSTPKGKGK 741
Query: 270 SVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL--- 325
F P ++++A+ +N D R QEDA+E+L F ++ +H+E++ L
Sbjct: 742 DKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEEIIYLLSR 797
Query: 326 ---------QGEST---------SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
G+S+ I+ A + W VG K K+ V R
Sbjct: 798 TSTTSSSIPNGQSSDPSSRKIERPISPGAGANGNADSSSGWLEVGKKQKTHVVRATESRE 857
Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
S++S +FGG+L+S++ G K S T++P+ L LDI + +I DALR S PE + G
Sbjct: 858 SSVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGATILSITDALRAISTPEIIHGV 917
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRD 485
+++ G G V A K+V ++T K+LI HL RF Y ++ G K K+V + + L++ +
Sbjct: 918 YSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYGVDLMIPNE 975
Query: 486 LLVTPSAEGR---KYELVATVTHHGRDPSKGHYTAD-AR--------------------- 520
+ ++P+ KY L V HHG S GHYT AR
Sbjct: 976 I-ISPARRTSSPIKYALFGVVYHHGSSASGGHYTVSVARPSLSSSASSTPAGTSISTSSS 1034
Query: 521 --YFNDQWLHFDDASVTAIGTSKVL--HDQ---------------AYVLFYKQV 555
+WLHFDD +V + V+ DQ AY+LFY++V
Sbjct: 1035 STTMATRWLHFDDENVREVREEDVVVSLDQAKGGESGLVGGRERCAYLLFYRRV 1088
>gi|443896840|dbj|GAC74183.1| ubiquitin-specific protease [Pseudozyma antarctica T-34]
Length = 854
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 194/445 (43%), Gaps = 102/445 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF- 256
PRGL+N GN CF NA LQ L+ C+PF L L ++P P + A + F+ +F
Sbjct: 335 PRGLVNKGNFCFANAILQTLVYCAPFYNLFT-LVGNEVPADFGNATPLMEAVIHFLREFL 393
Query: 257 ---------DTPSGGSSKKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQED 306
D P G + PF P +++A+ N D R QED
Sbjct: 394 PADASHALNDGPLPGQDASTAAAA---SEPFLPEFVYDAMRLNKRFDQ----MRRGHQED 446
Query: 307 AQEFLSFIMDQMHDELL----------------------KLQGESTSINGAN-------- 336
A+EFL F +D +H+EL+ K+ E +NG +
Sbjct: 447 AEEFLGFFLDTLHEELISAQRRSALKLAQSASGPNGLLAKMSEEEKKLNGVSDDDLRRLG 506
Query: 337 --------------TALVSLAEEDE----------------WETVGPKNKSAVTRTQSFL 366
L + ++DE W VG K K+A TRT S
Sbjct: 507 VRINKDGSSADAVGLGLEAALDDDEIVEREVMRPVSPSEQGWMEVGQKGKTAYTRTTSTS 566
Query: 367 PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
S ++ IFGG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE + G
Sbjct: 567 ESPITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPEIIPG 626
Query: 427 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRD 485
S A V A K V +++L +L+LHL RF Y G K K + + L + +
Sbjct: 627 --VWSPARAAQVDATKQVFVESLPPVLVLHLKRFIYDEIGGVQKSQKPLAYGTTLDIAPE 684
Query: 486 LLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSK 541
+L +P+ + +Y L V HHGR S GHYT D R WLH DD I T
Sbjct: 685 VL-SPAMRAQPRPRYRLFGIVYHHGRHASGGHYTVDVLRQDGHSWLHIDDTLFHPIPTEH 743
Query: 542 VL-----------HDQ-AYVLFYKQ 554
V+ HD AY+LFY++
Sbjct: 744 VVRNAASANKDHGHDGLAYLLFYRR 768
>gi|342319815|gb|EGU11761.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 974
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 189/407 (46%), Gaps = 69/407 (16%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDI----------PKAGYPTLT 247
PRGLIN+GNLCF NATLQAL+ C F + L++ +D+ K+ +
Sbjct: 530 PRGLINNGNLCFANATLQALVYCGAFWNLLGLIERGTKKDLREAMAGKTEKDKSERSAVE 589
Query: 248 AFVGFVSDFDT----------PSGGSSKKKNISVLDIG------RPFSPSMFEAVLK--- 288
A + F+++F T P+ +S N PF+ ++ +
Sbjct: 590 AMIAFLAEFRTSVSSTSPAFDPAQNTSSSANADASTSSGTSTPKPPFNNNVHPPISSASS 649
Query: 289 --------------NFTPDVPNSISGRPR--------QEDAQEFLSFIMDQMHDELLKLQ 326
+ TP + +S+ PR QEDA+EFL F ++ +H+E++K+
Sbjct: 650 VASSSSATSQPAPLSPTP-IHDSLRHNPRFDAMRRGTQEDAEEFLGFFLETLHEEVVKIM 708
Query: 327 --GESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK 383
E +S A DE WE VG K + A TRT S ++ IFGG+L+SV++
Sbjct: 709 ELEEKKEQGKGKGKAISQAGGDEGWEEVGSKGRVATTRTTETKESPITRIFGGKLRSVLR 768
Query: 384 AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKS 443
G K S T++PF L LDI + V +IEDAL +APE+L Y TS + A K
Sbjct: 769 CPGQKDSVTIEPFQRLQLDIQPDHVLSIEDALVQLTAPESLPDYVTS---RGRTLDATKQ 825
Query: 444 VKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTP-----SAEGRKY 497
V + L +LILHL RF Y G K K V + +L + ++ P G KY
Sbjct: 826 VFLDALPPVLILHLKRFLYDEVGGVQKSTKKVAYGTELAIDERVMSAPLKAQVGRAGAKY 885
Query: 498 ELVATVTHHGRDPSKGHYTADAR--YFNDQWLHFDDASVTAIGTSKV 542
EL V HHG S GHYT R Y + WL DD + + +V
Sbjct: 886 ELFGVVYHHGLHASGGHYTVAVRRGYHSPTWLELDDTYMRTLDAKEV 932
>gi|290986388|ref|XP_002675906.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
gi|284089505|gb|EFC43162.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
Length = 719
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 188/396 (47%), Gaps = 63/396 (15%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
+ PRG+ N N C++NA LQ L+S F +++ L + YP FV V+++ T
Sbjct: 274 IQPRGMTNINNSCYMNAVLQTLVSLPQFYHVMKRLGKISLDNEEYPLTNKFVRLVNEYQT 333
Query: 259 ------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-------QE 305
SG +KK+ + F + E ++ ++ D S Q
Sbjct: 334 MKTHRPQSGKEGEKKD------RKYFINASTEHLVPSYIVDYIQQSSTNLEDAFLLGTQH 387
Query: 306 DAQEFLSFIMDQMHDELLKLQG------------------ESTSINGANTALVSLAEEDE 347
DA EFL+ I+ ++H+EL K + E+TS + + +EE
Sbjct: 388 DAHEFLNHILQRLHEELKKTEATLGRKSPSASKKKSNKKQEATSEQAEQPSTETTSEE-- 445
Query: 348 WETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYS 405
W+ VG KNK+ R S+ ++ F G++KS V+ QG +K S+ V+PF LHL I
Sbjct: 446 WKEVGKKNKANPMREHEMGDSSVIARTFAGKMKSFVQKQGESKGSSVVEPFFSLHLPIKD 505
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS- 464
E + ++ ALR + EN+ S+ I L K+L+LHL RF + S
Sbjct: 506 ENIKGVKFALREMTKEENVSDKNAKSS-------------IYQLPKVLLLHLRRFDFSST 552
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GR---KYELVATVTHHGRDPSKGHYTAD 518
+G K+ K +RF +L + D V P+ + GR KY L + + HHG+D + GHY+
Sbjct: 553 EGVQKISKRIRFDYELNI--DEKVVPNVKAISGRPSLKYRLASVICHHGKDATSGHYSTY 610
Query: 519 ARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
++ +W+H DD VT + VL QAY+L Y Q
Sbjct: 611 IQHGCGKWIHIDDTKVTVVSLQHVLDQQAYILTYVQ 646
>gi|58260736|ref|XP_567778.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229859|gb|AAW46261.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1099
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 219/487 (44%), Gaps = 110/487 (22%)
Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD---------------LLPRGLINSGNLCFLNA 215
AAA SS+ E +K ++E V S++ ++PRGLIN+GN+CF N
Sbjct: 620 AAAAMSSVPSPHEELIKLLSEGVSSLRGSGTTVGLSVKEKEALMVPRGLINTGNMCFANT 679
Query: 216 TLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF------DTPSGGSSKK 266
LQ L+ C PF +L +E R D+ + P L A + F+ +F T + + K
Sbjct: 680 ILQVLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIIFLREFVSSPESSTSTTSTPKG 738
Query: 267 KNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 325
K F P ++++A+ +N D R QEDA+E+L F ++ +H+E++ L
Sbjct: 739 KGKDKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEEIIYL 794
Query: 326 ----------------------QGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 362
Q E A + A+ W VG K K+ V R
Sbjct: 795 LSQTSTTSSSMPNGQPSDSSSRQVERPVSPRAGAGINGNADSSSGWLEVGKKQKTHVVRA 854
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
SA+S +FGG+L+S++ G K S T++P+ L LDI A+ +I DALR S PE
Sbjct: 855 TESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGPAILSITDALRAISTPE 914
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
+ G +++ G G V A K+V ++T K+LI HL RF Y ++ G K K+V + + L
Sbjct: 915 IIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYGVDL 972
Query: 481 VLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTAD-AR---------------- 520
+ + +++P ++ KY L V HHG S GHYT AR
Sbjct: 973 AIPNE-IISPARRTSTSIKYALFGVVYHHGSSASGGHYTVSVARPSSSSSSSTSSTSIQS 1031
Query: 521 ---------------YFNDQWLHFDDASVTAIGTSKVL--HDQ---------------AY 548
+WLHFDD +V + V+ DQ AY
Sbjct: 1032 PAGTSSSLPPPPSSTTIASRWLHFDDENVREVREEDVVVSLDQAKGGETGSVGGRERCAY 1091
Query: 549 VLFYKQV 555
+LFYK+V
Sbjct: 1092 LLFYKRV 1098
>gi|71019387|ref|XP_759924.1| hypothetical protein UM03777.1 [Ustilago maydis 521]
gi|46099579|gb|EAK84812.1| hypothetical protein UM03777.1 [Ustilago maydis 521]
Length = 918
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 195/442 (44%), Gaps = 98/442 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFDT 258
PRGL+N GN CF NA LQ L+ C+PF L + + G P + A + F+ +F
Sbjct: 385 PRGLVNKGNFCFANAILQTLVYCAPFYNLFNLVANQISADFGNATPLMEAVIQFLREF-L 443
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSIS--------GRPRQEDAQE 309
P S+ LD P A + F P+ V +++ R QEDA+E
Sbjct: 444 PVDSSTS------LDARHPGQDGFIAAASEPFVPEFVYDAMRLNKRFDQMRRGHQEDAEE 497
Query: 310 FLSFIMDQMHDELL-----------------------------KLQG------------- 327
FL F +D +H+EL+ KL G
Sbjct: 498 FLGFFLDTLHEELISAQRRSALKLAQSASAPNGLLSKMSDDEKKLNGVSDDDLKRLGVRV 557
Query: 328 --ESTSINGANTALVSLAEEDE----------------WETVGPKNKSAVTRTQSFLPSA 369
++ S + L + +ED+ W VG K K+A TRT S S
Sbjct: 558 GKDAASADAVGLGLDAAFDEDDIVEREVMRPVSPSEQGWMEVGQKGKTAYTRTTSTSESP 617
Query: 370 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
++ IFGG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE + G +
Sbjct: 618 ITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPETIPGVWS 677
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLV 488
S + V A K V I++L +L+LHL RF Y G K K + + L + D+L
Sbjct: 678 PS--RSAQVDATKQVFIESLPPVLVLHLKRFIYDEIGGVQKSQKPLSYGSTLEIAPDVL- 734
Query: 489 TPSAEGR---KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVL- 543
+P+ + +Y L V HHGR S GHYT D R WLH DD + T V+
Sbjct: 735 SPAMRSQPRPRYRLFGIVYHHGRHASGGHYTVDVLRQDGLSWLHIDDTLFYNVATEHVVR 794
Query: 544 ----------HD-QAYVLFYKQ 554
HD AY+LFY++
Sbjct: 795 NAASTSKDHAHDGLAYLLFYRR 816
>gi|134117471|ref|XP_772629.1| hypothetical protein CNBK3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255246|gb|EAL17982.1| hypothetical protein CNBK3330 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1092
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 218/487 (44%), Gaps = 110/487 (22%)
Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD---------------LLPRGLINSGNLCFLNA 215
AAA SS+ E +K ++E V S++ ++PRGLIN+GN+CF N
Sbjct: 613 AAAAMSSVPSPHEELIKLLSEGVSSLRGTGTTVGLSVKEKEALMVPRGLINTGNMCFANT 672
Query: 216 TLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF------DTPSGGSSKK 266
LQ L+ C PF +L +E R D+ + P L A + F+ +F T + + K
Sbjct: 673 ILQVLVYCPPFTELFEEFGKRLKADLARKT-PLLEAMIIFLREFVSSPESSTSTTSTPKG 731
Query: 267 KNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 325
K F P ++++A+ +N D R QEDA+E+L F ++ +H+E++ L
Sbjct: 732 KGKDKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEEIIYL 787
Query: 326 ----------------------QGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 362
Q E A + A+ W VG K K+ V R
Sbjct: 788 LSQTSTTSSSMPNGQPSDSSSRQVERPVSPRAGAGINGNADSSSGWLEVGKKQKTHVVRA 847
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
SA+S +FGG+L+S++ G K S T++P+ L LDI A+ +I DALR S PE
Sbjct: 848 TESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGPAILSITDALRAISTPE 907
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
+ G +++ G G V A K+V ++T K+LI HL RF Y ++ G K K+V + + L
Sbjct: 908 IIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYGVDL 965
Query: 481 VLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTAD-AR---------------- 520
+ + +++P+ KY L V HHG S GHYT AR
Sbjct: 966 AIPNE-IISPARRTSTPIKYALFGVVYHHGSSASGGHYTVSVARPSSSSSSSTSSTSIQS 1024
Query: 521 ---------------YFNDQWLHFDDASVTAIGTSKVL--HDQ---------------AY 548
+WLHFDD +V + V+ DQ AY
Sbjct: 1025 PAGTSSSLPPPSSSTTIASRWLHFDDENVREVREEDVVVSLDQAKGGETGSVGGRERCAY 1084
Query: 549 VLFYKQV 555
+LFYK+V
Sbjct: 1085 LLFYKRV 1091
>gi|328854199|gb|EGG03333.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
Length = 692
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 181/383 (47%), Gaps = 51/383 (13%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TRDIPKAGYPTLTAFVG 251
K V ++PRGLIN+GN+CF NA LQ L+ C PF LL+ L T K+ P L A +G
Sbjct: 291 KHVPFIVPRGLINNGNICFANAILQVLVYCVPFYNLLKHLNLYTSHDFKSQTPLLDAMIG 350
Query: 252 FVSDFDT-PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 303
F+++F++ P K+ ++ R P+ + + + F + V + G R
Sbjct: 351 FINEFESIPLSELEPIKDPKTSNVLRYHLPTHLKKIGEPFIAESVWIATKGNSRFDAMRG 410
Query: 304 --QEDAQEFLSFIMDQMHDELL--------------KLQGESTSINGANTALVSLAEE-- 345
QEDAQEFL F +D +H+ELL +L +T+ + L A E
Sbjct: 411 GQQEDAQEFLCFFLDTLHEELLTAIDRHDGPIRLRQQLADAATNTTNKDNHLKPPANELD 470
Query: 346 ------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
D W VG K + +VTR+ + S L+ IFG +S++ K S T +P +L
Sbjct: 471 QPNSSSDGWMEVGSKGRPSVTRSTDSILSPLTSIFGFNTRSILHKPKQKDSVTFEPNNML 530
Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
L I S + TIE+AL FS PE + N +A K + I++ + ILHL R
Sbjct: 531 QLSIESPNIKTIEEALLNFSTPEIISDMMNK---NGIKSSATKQIFIESFPPVFILHLKR 587
Query: 460 FSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-------KYELVATVTHHGRDPSK 512
F Y K KS++F G L + S G Y+L A V HHG S
Sbjct: 588 FGYFEGEVKKNSKSIKF------GNFLKIPASVRGPAQRNEEVSYKLFAVVYHHGLMASG 641
Query: 513 GHYTADAR-YFNDQWLHFDDASV 534
GHYT + D+W++FDD +
Sbjct: 642 GHYTVSIKQQITDEWIYFDDTII 664
>gi|255727604|ref|XP_002548728.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
gi|240134652|gb|EER34207.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
Length = 534
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 188/403 (46%), Gaps = 72/403 (17%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLTAFVGFVS 254
D+ PRGL NSGN+C++N+ LQ L+ C PF +LL+ + T+ I G P L A + F +
Sbjct: 159 DVKPRGLTNSGNICYMNSILQILLYCEPFNRLLKLIETKSIGSLGVSPTPLLDATITFFN 218
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
F S P SP F + L T S +QEDA+EFL +
Sbjct: 219 QFQEDSKA--------------PVSPEDFYSSL---TKQDKFSHLKWGQQEDAEEFLGYY 261
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEED---------------------------- 346
+D ++DE+L + +S S + + + + ++E
Sbjct: 262 IDGLNDEMLN-EIKSVSTSQVDKLIQTYSQEHDSESSAKFKYNIKSTIRRIKNEEEEEDG 320
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLHLD 402
EW V K S T+ + P+ L+ IFGGQ KSVV ++ + S T+ PF + LD
Sbjct: 321 EWSQVNNKKNSTTTKIE-VDPTPLNMIFGGQFKSVVTIPKQSSSFQRSITLDPFQHVQLD 379
Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
I AV TIEDA + + EN+ S T N + KK I+ L +LI+HL RFSY
Sbjct: 380 I--SAVDTIEDAFKHLNELENI-----SYTNNNKEIQVKKQTFIEKLPNVLIIHLKRFSY 432
Query: 463 GSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA 519
G KL K + + L++ +++L T + KY+L A V HHG GHYT+D
Sbjct: 433 LKDQEIGVEKLRKKIDYSHDLIIPKEVLATEPSTPIKYQLSAVVYHHGSSADAGHYTSDI 492
Query: 520 RYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 555
+ W DD V I +VL+ AY+L Y ++
Sbjct: 493 -HNAGVWWRIDDTFVKQIKNEEVLNAGTEENIKNAYILLYSRI 534
>gi|320590158|gb|EFX02601.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
Length = 926
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 182/376 (48%), Gaps = 74/376 (19%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
SV + PRGLIN+GN+C++N+ LQ L+ C+PF L + D+ + G
Sbjct: 490 SVAFIEPRGLINTGNMCYMNSVLQVLIFCTPFYDFLDQ--NDDLERYG------------ 535
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
D TP K +S + R R Q+DA+EFL F+
Sbjct: 536 DAFTPEFVYEAIKQLSRFESMR------------------------RGHQQDAEEFLGFL 571
Query: 315 MDQMHDELLKL-QGESTSINGANTALVS-----------LAEEDEWETVGPKNKSAVTRT 362
++ +++E K+ Q S + N ++T + + L+ D W VGP+ ++A+TR+
Sbjct: 572 LECLNEECTKVVQDSSRATNPSSTQVTTPTASVTSEIPDLSGGDGWLEVGPRQRAAITRS 631
Query: 363 QSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
S+ ++ IF G+L+S ++ G K S T++P+ L LDI S V I DALR + P
Sbjct: 632 SGHTSSSPVNSIFSGKLRSELRVPGLKDSVTLEPYQSLQLDIDSPQVRNILDALRGLTKP 691
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
E L G S G V+ K V I+TL +LILHL RF + Q G+ K+ K + +PL+
Sbjct: 692 EVLNGDFGSPHGKD--VSVTKQVFIETLPPVLILHLKRFQFDWQGNGTVKIWKKIGYPLE 749
Query: 480 LVLGRDLLVTPSAEGR------------KYELVATVTHHGRDPSKGHYTADA-RYFNDQW 526
L + R++ GR KY L A V HHG+ S GHYT D R +W
Sbjct: 750 LEIPREIF------GRQKRNKLLTERLPKYRLNAVVYHHGKQASGGHYTVDVLREDGREW 803
Query: 527 LHFDDASVTAIGTSKV 542
+ DD + I + V
Sbjct: 804 IRLDDTVIRRIRSEDV 819
>gi|353236272|emb|CCA68270.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Piriformospora
indica DSM 11827]
Length = 814
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 201/435 (46%), Gaps = 103/435 (23%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE-----LRTRDIPKAGYPTLTAFVGFV 253
++PRGL+N+GNLCF NA LQAL+ PF +L + L + +A P + A + F+
Sbjct: 403 IVPRGLVNTGNLCFANAILQALVYTPPFWKLFNDIAATGLTAQRTGRAATPMVDATIAFL 462
Query: 254 SDFDT------------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKN-FTP-DVPNSIS 299
++F P+ ++ + I +P S + +N FT ++ NS+
Sbjct: 463 NEFKPAFTPIPVDLSAFPTAQAAASMSTPKPAINKPTSSRDSNILPRNSFTASELYNSLK 522
Query: 300 GRP--------RQEDAQEFLSFIMDQMHDEL---LKLQGESTS----------INGANTA 338
+P QEDA+EFL F +D +H+EL L G+S I+ A
Sbjct: 523 SKPTFDGMRLGHQEDAEEFLGFFLDALHEELCGLLNALGDSAQADAVKDSDRDIDKLEPA 582
Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
+ + + DEW+ VG +N++ VTRT SA++ IFGG+ +S+++A G SA+V+ +
Sbjct: 583 IDVVQDGDEWQEVGRRNRATVTRTTQGTESAITAIFGGKFRSLLRASGRPDSASVEEWRC 642
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENL-----EGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
L LDI + +IEDAL SA E + +GY + +T K + ++ L IL
Sbjct: 643 LQLDIQPPHIRSIEDALYALSAVETVTIQSHQGYPSEAT---------KQMFVEHLPPIL 693
Query: 454 ILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GRKYELVATVTHHGRDP 510
ILHL RF Y Q G ++L S RKY+L V HHG
Sbjct: 694 ILHLKRFIYDPQ----------------TGIEMLSAASKHRPFSRKYQLYGVVYHHGLAA 737
Query: 511 SKGHYTADARY---------------FNDQWLHFDDASVTAIGTSKVL------------ 543
+ GHYT + + + W+ FDD +V + V
Sbjct: 738 TGGHYTLEVLHPTANAYMPARDHSSNSTEGWMRFDDETVRLLTPDDVFGSQAQPTHHGWA 797
Query: 544 -HDQ--AYVLFYKQV 555
HD+ AY+LFY++V
Sbjct: 798 GHDERVAYILFYRRV 812
>gi|444722234|gb|ELW62932.1| Ubiquitin carboxyl-terminal hydrolase 10 [Tupaia chinensis]
Length = 881
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 182/356 (51%), Gaps = 67/356 (18%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNA------------------TLQALMSCSPFVQLL 230
I++PV L PRGLIN GN C++NA TLQAL++C P L+
Sbjct: 401 IHKPV----SLQPRGLINKGNWCYINAEVPRARFFPLRFLTAHVQTLQALVACPPMYHLM 456
Query: 231 Q--ELRTR-DIPKAGYPTLTAFVGFVSDFD---TPSGGSSKKKNISVLD--IGRPFSPSM 282
+ L ++ P P + +FV +++F P + ++ +++ P P
Sbjct: 457 KFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQGEYHVRLMNEFTNMPVPPKP 516
Query: 283 FEAV----LKNFTPD--------------VPNSISGRPRQEDAQEFLSFIMDQMHDELLK 324
+A+ +++ P + +S+S + RQEDA+E+L FI++ +H+E+L
Sbjct: 517 RQALGDKTVRDIRPGAAFEPTYIYRLLTVIKSSLSEKGRQEDAEEYLGFILNGLHEEMLN 576
Query: 325 LQG---------------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
L+ +S S++ E+EWE VGP+NKS+VTR F+ +
Sbjct: 577 LKKLLSPSNEKLPVSNGPKSHSVSEEEQEEQGAGSEEEWEQVGPRNKSSVTRQAEFVQTP 636
Query: 370 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T
Sbjct: 637 ITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTT 696
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGR 484
+ V + V ++ L +L+LHL RF Y + G KL K++ +P+ L + +
Sbjct: 697 KTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISK 749
>gi|357627999|gb|EHJ77487.1| hypothetical protein KGM_16487 [Danaus plexippus]
Length = 1123
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 202/393 (51%), Gaps = 49/393 (12%)
Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLT 247
N PV L PRGL N N C++NA LQAL++C PF +L+ L +TR K+ P +
Sbjct: 738 NRPV----SLTPRGLTNHSNYCYVNAILQALIACPPFYNMLKALPYQTRRG-KSSTPVID 792
Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE-------AVLKNFTPDVPNSISG 300
+ V F P ++++ G P P+M VL+ P P S G
Sbjct: 793 SMVELCYAFG-PLPSANRRGRGESGASGAPAVPAMSPLDGSAGLRVLRALRP-FPGSQEG 850
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAE-------EDEW 348
RQEDA+EFL +++ ++DE+L+L E +NG +V+ + +DEW
Sbjct: 851 --RQEDAEEFLGCLLNSLNDEMLELIKLVEPEEPKDLNGKPNGIVAQEQPPDEDNDDDEW 908
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEA 407
+ +GP+N+ AV R + + ++DIF G+ + + +A + + VQPF L LDI E
Sbjct: 909 KVMGPRNRGAVERRWAARRTPVADIFRGRTRLRLHRAPNHDVTDAVQPFFTLQLDI--ER 966
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
T++DAL L + + LE GV A + + ++ L +L+LHL F S+G
Sbjct: 967 STTVKDALELLAGKDTLE----------GVSDAWQQLSLEQLPVVLLLHLKCFQLDSEGH 1016
Query: 468 T-KLHKSVRFPLQLVLGRDLLVTP-SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
T K+ K++ FP+ L + ++ + + + R Y+L A V H G + KGHY D +
Sbjct: 1017 TAKIVKNIDFPIDLKIDPKIISSKHTTKQRLYKLFAVVYHEGVEAVKGHYLTDTFHGQVG 1076
Query: 526 WLHFDDASVTAIGTSKVLHDQ----AYVLFYKQ 554
W+ +DD++VT + ++VL + Y+L Y++
Sbjct: 1077 WIRYDDSTVTQVTDAQVLKPKPPRMPYLLMYRR 1109
>gi|330792183|ref|XP_003284169.1| hypothetical protein DICPUDRAFT_52731 [Dictyostelium purpureum]
gi|325085866|gb|EGC39265.1| hypothetical protein DICPUDRAFT_52731 [Dictyostelium purpureum]
Length = 442
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 152/269 (56%), Gaps = 28/269 (10%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGE-------------STSINGANTALVSLAEEDEWET 350
Q+DAQEFL F++D +++E L L + S+S + +++ S D+WE
Sbjct: 180 QQDAQEFLVFLLDLINEEFLTLLKDIDIKDEEKSLLSPSSSSSSSSSKDSSELNSDDWEV 239
Query: 351 VGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAV 408
VG K+AV T +Q LP + +S IF G L+S G K S TV+PF LHLDI E +
Sbjct: 240 VGKNGKTAVFTNSQQELPKTPISQIFSGVLRSSFNRTGQKESITVEPFYCLHLDIRPEEI 299
Query: 409 HTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
+++EDAL+ F PE +E Y + +TA KS ++L +ILI+HL RF++ S S
Sbjct: 300 NSLEDALKFFMKPEIIEDY--TCPNKKTEITASKSWSFESLPRILIIHLKRFAFESDASR 357
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ--- 525
KL K + FP QL + T ++ +KY L++ V+HHGR S+GHYT D F Q
Sbjct: 358 KLDKKISFPTQLP-----ITTANSVHKKYSLLSVVSHHGRGLSQGHYTCDI--FEQQKNI 410
Query: 526 WLHFDDASVTA-IGTSKVLHDQAYVLFYK 553
W+ +DDA + I VL +AY+L Y+
Sbjct: 411 WIRYDDAQIINDIKEKDVLEREAYLLLYQ 439
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
PRGLIN+ N CF+N LQ+L C F+++++ ++ D YPTL +F F +++
Sbjct: 18 PRGLINTSNTCFMNVILQSLTGCQLFLKVIKNIQDLDNLHI-YPTLNSFNQFYAEY 72
>gi|389748481|gb|EIM89658.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 1043
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 220/452 (48%), Gaps = 91/452 (20%)
Query: 177 SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 236
S + K + KA ++P K + PRGL+NSGN+CF NA LQ L+ C PF +L+ EL +
Sbjct: 604 SAAAGKSLAPKAASQPPK----IRPRGLVNSGNMCFANAVLQLLVYCPPFWKLMTEL-GK 658
Query: 237 DIPKAGYPT------------------------LTAFVGFVSDFDT-----------PSG 261
+P++ PT + A + F+ +F P+G
Sbjct: 659 LLPESQGPTPGQASGTATPVNGVKVHEEGDTPLVDATIRFLKEFGPVEPKEKEKERRPNG 718
Query: 262 GSSKKKNISVLDIGR-----PFSPS-MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
K+ D G F P+ +++A+ + D N G QEDA+EF F +
Sbjct: 719 YGKGKERREQEDEGEGDGLDSFMPTYVYDAMKEKKRFD--NMRGGH--QEDAEEFFGFYL 774
Query: 316 DQMHDELLKLQGESTSINGANTA----LVSLAE-------EDEWETVGPKNKSAVTRTQS 364
D + +L ++IN + A V++ E E+ W VG KNKS VTRT
Sbjct: 775 DTL---EEELLSLLSAINPPSKAEKEKPVNIEEKVEEPPQEEGWMEVGKKNKSVVTRTVK 831
Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
S ++ IFGG+ +S ++A G + S V+ + L LDI E+VHTI+DAL S P+++
Sbjct: 832 STESPITRIFGGKFRSTLRAPGQRDSVMVEDWRSLQLDIQPESVHTIKDALARISIPQSV 891
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLVL 482
+ T+ST V A + + I+ L +IL+LHL RF Y ++G KL K V F +L +
Sbjct: 892 Q--VTNSTTRV-PVEASQQILIEALPRILVLHLKRFLYDVDAKGVVKLGKMVEFGPELDI 948
Query: 483 GRDLL-----VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN--------DQWLHF 529
G DL+ V P A +Y+L + HHG S GHYT D + N + W+
Sbjct: 949 GSDLMAPGKKVGPPA---RYQLYGVLYHHGLSASGGHYTLDVLHPNRDGGVKPREGWIRI 1005
Query: 530 DDASVTAIGTSKVLH--DQ----AYVLFYKQV 555
DD V+ + V D+ AY+LFY+++
Sbjct: 1006 DDELVSDVRQEDVFSGLDRDDRCAYLLFYRRL 1037
>gi|410076176|ref|XP_003955670.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
gi|372462253|emb|CCF56535.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
Length = 829
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 205/447 (45%), Gaps = 92/447 (20%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
+K + PRG+IN+ N+CFL++ LQ L+ C PF+ +L L TR+ I + L A +
Sbjct: 386 LKSIFPRGIINTANVCFLSSVLQVLLYCQPFIDVLNVLSTRNVHSRIASSQSKLLDACIT 445
Query: 252 FVSDFDTPSGGSSKKKNISVLD-IGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 303
FD + SKK+ SV D I + +V+ PD +IS P+
Sbjct: 446 IYKQFDRENFLESKKRQQSVEDEIEDNEKTPTYGSVIDAINPDEFYRTISTIPKFKDLQW 505
Query: 304 --QEDAQEFLSFIMDQMHDELL---------KLQGESTSINGA----------------- 335
QEDA+EFL+ ++DQ+H+EL+ ++Q SIN
Sbjct: 506 GQQEDAEEFLTHLLDQLHEELVASINLLSENEIQNILQSINDQELKVFFIRNLSRFKKSE 565
Query: 336 --NTALVSLAE-------------EDEWETVG------PKNKSAVTRTQSFLPSALSDIF 374
N A V L E ED W V KNK+A RT +PS +S +F
Sbjct: 566 FLNNASVQLQELISKYGNASEENEEDGWHEVSSSGKRSKKNKTAAKRTVEVIPSPISKLF 625
Query: 375 GGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
GGQ +SV+ NK S T+ PF + LDI +V +E A + FS E L +RTSS
Sbjct: 626 GGQFRSVLDIPNNKERQSITLDPFQTIQLDISDSSVIDLEGAFKKFSEFE-LIPFRTSSG 684
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GST--------------KLHKSVRFP 477
+ V AKK I L ++L++ L RFS+ S G + K+ K + +
Sbjct: 685 TD---VEAKKQTFIDKLPEVLLIQLKRFSFVSNVGKSNDMTNYNAYNGRIEKIRKKINYG 741
Query: 478 LQLVLGRDLLVT-PSAEGRKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVT 535
+L++ + + + + R+Y L + HHG P GHYTAD + + +W DD ++
Sbjct: 742 HELIIPSESVSSNATMSNREYSLTGVIYHHGLSPDGGHYTADVLHSESKKWYRIDDVNIN 801
Query: 536 AIGTSKVLH--------DQAYVLFYKQ 554
+ VL AY+L Y++
Sbjct: 802 ELEEDDVLKGGEEDNDSRTAYILMYQK 828
>gi|328850830|gb|EGF99990.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
Length = 659
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 190/405 (46%), Gaps = 47/405 (11%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR---TRDIPKAGYPTLTAFV 250
K V ++PRGLIN+GN+CF NA LQ L+ C PF LL+ L T D K+ P L A +
Sbjct: 258 KHVPFIVPRGLINNGNICFANAILQVLVYCVPFYNLLKHLSLYTTHDF-KSQTPLLDAMI 316
Query: 251 GFVSDFDT-PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---VPNSISGR----- 301
GF+++F++ P K+ ++ R P+ + + + F + + ++ R
Sbjct: 317 GFINEFESIPLSELEPIKDPKTSNVLRYHLPTYLKKIGEPFIAESVWIATKVNSRFDAMR 376
Query: 302 -PRQEDAQEFLSFIMDQMHDELL--------------KLQGESTSINGANTALVSLAEE- 345
+QEDAQ+FL F +D +H++LL +L G + + + + A E
Sbjct: 377 GGQQEDAQKFLCFFLDTLHEKLLSAIERHDGLIRLRQQLAGAAPNATNKDNLIKPPANEL 436
Query: 346 -------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
D W VG K + +VTR+ + S L+ IFG +S++ K S T +P +
Sbjct: 437 DQPNPSSDGWMEVGSKGRPSVTRSTDSISSPLTSIFGFNTRSILHKPKQKDSVTFEPNNM 496
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
L L I S + TIE+AL FS PE + T N +A K + I++ + ILH
Sbjct: 497 LQLSIESPNIKTIEEALLNFSTPEIISDMMTK---NGIKSSATKQIFIESFPPVFILHSK 553
Query: 459 RFSYGSQGSTKLHKSVRFPLQLVLGRDLL-VTPSAEGRKYELVATVTHHGRDPSKGHYTA 517
RF Y K KS++F L + + T E Y+L A V HHG S GHYT
Sbjct: 554 RFGYFEGEVKKNSKSIKFGNLLKIPASVRGSTQRTEEVSYKLFAVVYHHGLMASGGHYTV 613
Query: 518 DAR-YFNDQWLHFDDASV----TAIGTSKVLHD--QAYVLFYKQV 555
+ D W++FDD + A D YVLFY +
Sbjct: 614 SIKQQVTDDWIYFDDTMIKDHHQAFPNEDFHQDLKTPYVLFYTRC 658
>gi|169594854|ref|XP_001790851.1| hypothetical protein SNOG_00156 [Phaeosphaeria nodorum SN15]
gi|160700955|gb|EAT91651.2| hypothetical protein SNOG_00156 [Phaeosphaeria nodorum SN15]
Length = 862
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 45/373 (12%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 251
K V L PRGLI LQ L+ C PF L ++ R + K+ P + A +
Sbjct: 411 KKVTFLEPRGLI-----------LQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDALIM 459
Query: 252 FVSDFD-TPSGGSSKKKNISVLD-----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
F+ DF S + +K + + D G P +P V++ P N G+ QE
Sbjct: 460 FMRDFKLIDSAATVEKLRLRLKDKELEQYGDPLTPEYVYDVIRRL-PRFDNMKRGQ--QE 516
Query: 306 DAQEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDE--WETVGPKNKSAVT 360
DA+EFL F++ +HDE ++K ++ NG + +E + W VG K KSA T
Sbjct: 517 DAEEFLGFLLAGLHDEAAHIIKSDKQNQVSNGVTSPSAEQSESVDGGWMEVGAKQKSANT 576
Query: 361 RTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
++ + + ++ IFGG+L+S K G KAS T++P+ L LDI ++ I DAL+
Sbjct: 577 QSSGAIEFETPITKIFGGKLRSEYKKPGEKASVTLEPYQPLQLDIGEPNINNISDALKNL 636
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
+ E L+G G + K V I++L +LILHL RF Y +QG K+ K V +PL
Sbjct: 637 TRLETLDG------AVRGARASTKQVHIESLPPVLILHLKRFHYDAQGPQKIWKKVGYPL 690
Query: 479 QLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 529
+L + +++ +T A R Y L++ V HHG++ S GHYT D R ++W+
Sbjct: 691 ELEIPKEVFPPHKRNSYMTHGAFPR-YRLISVVYHHGKNASGGHYTVDLRRQEGNEWIRM 749
Query: 530 DDASVTAIGTSKV 542
DD ++ I V
Sbjct: 750 DDTTLRRIRAEDV 762
>gi|68491385|ref|XP_710490.1| hypothetical protein CaO19.6319 [Candida albicans SC5314]
gi|46431699|gb|EAK91232.1| hypothetical protein CaO19.6319 [Candida albicans SC5314]
Length = 482
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 187/405 (46%), Gaps = 76/405 (18%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVS 254
D+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + T+ I G P L A + F +
Sbjct: 107 DIKPRGLTNTGNICYMNSILQILIHCEPFNRLLKLIETKSIGSLGPSSTPLLDATIIFFN 166
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
F G+ SP F A L S +QEDA+EFL +
Sbjct: 167 QFQENVKGA--------------ISPESFYASLTKLDK---FSHLKWGQQEDAEEFLGYY 209
Query: 315 MDQMHDELL------------------------------KLQGESTSINGANTALVSLAE 344
+D +++E L K +ST N A A+
Sbjct: 210 LDGLNEEFLGAIKQLNTPQIDSLIQVYAQDHDAEATAKFKFNVKSTIKRIKNDAE---AD 266
Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLH 400
+ EW V K S T+ + P+ L+ IFGG+ KSVV ++ + S T+ PF +
Sbjct: 267 DGEWNQVNKKKNSTTTKIE-IDPTPLNMIFGGEFKSVVTIPKQSSSFQKSITLDPFQHVQ 325
Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
LD+ S TIEDA++ + E++ S T N + KK I+ L +LI+HL RF
Sbjct: 326 LDVSS--ADTIEDAIKHLNESESI-----SYTNNNKEIQVKKQTFIEKLPNVLIIHLKRF 378
Query: 461 SYGSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTA 517
SY G KL K V + L++ ++++ + KY+LV+ V HHG GHYT+
Sbjct: 379 SYLKDQEIGVEKLRKKVDYNHDLIIPKEVMARDTGMPIKYQLVSVVYHHGSSADAGHYTS 438
Query: 518 DARYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 555
D Y QW DD +V I +VL+ AY+L Y+++
Sbjct: 439 DI-YNAGQWWRIDDTAVKQIQNEEVLNAGTEENIKNAYILLYRRI 482
>gi|261193134|ref|XP_002622973.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
gi|239589108|gb|EEQ71751.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
Length = 907
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 193/377 (51%), Gaps = 60/377 (15%)
Query: 199 LLPRGLINSGNLCFLNA------TLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVG 251
+ PRGL+N+GN+C++N+ L L + PF + ++E R D
Sbjct: 446 IEPRGLLNTGNMCYMNSISLPLLLLPLLTAIPPFRIMFMREFRVID-------------- 491
Query: 252 FVSDFDTPSGGSSKKKNISV----LDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
+ S +K + + L++ G F P V+++ P + G Q+D
Sbjct: 492 --------AATSVEKLRLRLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQD 540
Query: 307 AQEFLSFIMDQMHDELLKLQGESTS----INGANTA-LVSLAEE---DEWETVGPKNKSA 358
AQEFL F+++++HDE + ++TS I+ A A VS E + W VG K K A
Sbjct: 541 AQEFLGFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPA 600
Query: 359 VTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
+TR+ + S ++ IFGG+L+S + GNK S T++P+ L LDI S V+ I DAL+
Sbjct: 601 ITRSSGHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALK 660
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSV 474
+ PE ++G SS G VTA K V I++L +LILHL RF Y ++G+ K+ K V
Sbjct: 661 GLTKPETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKV 718
Query: 475 RFPLQLVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQ 525
+PL+L L ++ SA+G KY L + HHG++ S GHYT D R + +
Sbjct: 719 GYPLELELPKEAFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGRE 778
Query: 526 WLHFDDASVTAIGTSKV 542
W+ DD + + + V
Sbjct: 779 WIRLDDTVIRRVRSEDV 795
>gi|239613681|gb|EEQ90668.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ER-3]
Length = 906
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 193/377 (51%), Gaps = 60/377 (15%)
Query: 199 LLPRGLINSGNLCFLNA------TLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVG 251
+ PRGL+N+GN+C++N+ L L + PF + ++E R D
Sbjct: 445 IEPRGLLNTGNMCYMNSISLPLLLLPLLTAIPPFRIMFMREFRVID-------------- 490
Query: 252 FVSDFDTPSGGSSKKKNISV----LDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
+ S +K + + L++ G F P V+++ P + G Q+D
Sbjct: 491 --------AATSVEKLRLRLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQD 539
Query: 307 AQEFLSFIMDQMHDELLKLQGESTS----INGANTA-LVSLAEE---DEWETVGPKNKSA 358
AQEFL F+++++HDE + ++TS I+ A A VS E + W VG K K A
Sbjct: 540 AQEFLGFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPA 599
Query: 359 VTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
+TR+ + S ++ IFGG+L+S + GNK S T++P+ L LDI S V+ I DAL+
Sbjct: 600 ITRSSGHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALK 659
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSV 474
+ PE ++G SS G VTA K V I++L +LILHL RF Y ++G+ K+ K V
Sbjct: 660 GLTKPETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKV 717
Query: 475 RFPLQLVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFN-DQ 525
+PL+L L ++ SA+G KY L + HHG++ S GHYT D R + +
Sbjct: 718 GYPLELELPKEAFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGRE 777
Query: 526 WLHFDDASVTAIGTSKV 542
W+ DD + + + V
Sbjct: 778 WIRLDDTVIRRVRSEDV 794
>gi|403413792|emb|CCM00492.1| predicted protein [Fibroporia radiculosa]
Length = 877
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 197/395 (49%), Gaps = 50/395 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPKAG--------YPTLTAF 249
+ PRGL+N+GN+CF NA LQ L+ C PF +LL EL + P G P + A
Sbjct: 487 IQPRGLVNTGNMCFANAVLQILVYCPPFHRLLTELSKYLSGPVVGPQKEGTRATPLIDAT 546
Query: 250 VGFVSDFDTPSGGSSKKKNISVLD-IGRP--FSPS-MFEAVL--KNFTPDVPNSISGRPR 303
+ F+ +F S K K D P F P+ +++A+ K F + I G
Sbjct: 547 IQFMKEFVPESSLDKKAKGKERDDDFYEPESFIPTYVYDAMKEKKRFA----SMIGGH-- 600
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 362
QEDA+EFL F +D + +ELL L S + ++D+ W VG KN+S VTRT
Sbjct: 601 QEDAEEFLGFYLDTLEEELLSLSSSLLSKTPPKVDEEPVPQQDDGWYEVGKKNRSVVTRT 660
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
S+++ IFGG+ +S ++A K S TV+ + L LDI E VH+I+DAL+ S P+
Sbjct: 661 TKSTESSITRIFGGKFRSTLRAPHQKDSITVEDWRSLRLDIQREQVHSIKDALQHISHPQ 720
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
++ + + G VV A + I+ L +LILHL RF Y + K+ K V + +L
Sbjct: 721 PVQISQPTRPGV--VVEAAQQALIEALPSVLILHLKRFLYDTNVGDVVKIGKQVTYGPEL 778
Query: 481 VLGRDLLVTPSAEGR------KYELVATVTHHGRDPSKGHYTADARYFN--------DQW 526
+ DL+ A R KY+L + HHG S GHYT D + N W
Sbjct: 779 DISPDLM----APTRRTTYPIKYQLFGVLYHHGSSASGGHYTLDVLHPNRDLSDRPRSAW 834
Query: 527 LHFDDASVTAI------GTSKVLHDQAYVLFYKQV 555
+ DD V+ I G+S AY+LFY++V
Sbjct: 835 IRIDDELVSDIRPDDVFGSSDRDDRCAYLLFYRRV 869
>gi|302510725|ref|XP_003017314.1| hypothetical protein ARB_04194 [Arthroderma benhamiae CBS 112371]
gi|291180885|gb|EFE36669.1| hypothetical protein ARB_04194 [Arthroderma benhamiae CBS 112371]
Length = 837
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 184/371 (49%), Gaps = 51/371 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
L PRGL+N+GN+C++N+ + R K+ P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSIGR---------------RAAHSFKSDSPLVDAMIMFLREFRV 416
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
SS + K + + G F P V+++ R ++DAQEFL
Sbjct: 417 IDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHLP-------RFRDMRQDAQEFLG 469
Query: 313 FIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRTQ- 363
F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 470 FLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRSSG 529
Query: 364 -SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 530 DSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 589
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
+ G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL+L
Sbjct: 590 TMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPLEL 647
Query: 481 VLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+ R+ L + KY L+ + HHG+ S GHYT + R + +W+ FDD
Sbjct: 648 EIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRFDD 707
Query: 532 ASVTAIGTSKV 542
+ + + +V
Sbjct: 708 TYIRRVRSEEV 718
>gi|46137553|ref|XP_390468.1| hypothetical protein FG10292.1 [Gibberella zeae PH-1]
Length = 927
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 187/365 (51%), Gaps = 44/365 (12%)
Query: 199 LLPRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
L PRGLIN+GN+C++N+ + +A+ S K+ P + A + F+ +F
Sbjct: 501 LEPRGLINTGNMCYMNSISKRAVHSF----------------KSDTPLIDAMIMFMHEFK 544
Query: 258 TPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
T + + KN + G PF+P ++EA+ + +P S R Q+DA+E
Sbjct: 545 TIKSAAGVEPLRLALKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEE 599
Query: 310 FLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
FL F++ + DE + T + +A D+W VG K KSAV+R+
Sbjct: 600 FLGFLLQSLDDECTTVLKNFTPDEAEHQLSAGSDAGGADDWLEVGRKQKSAVSRSSGSNS 659
Query: 368 SALSD-IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
S+ IFGG L+S + G K S T +P+ L LDI S V + DALR + PE L+G
Sbjct: 660 SSPISRIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQG 719
Query: 427 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 484
S G VTA K V I++L +LILHL RF + ++ G+ K+ K + +PL+L + R
Sbjct: 720 DFNSPRGKE--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIPR 777
Query: 485 DLLV-----TPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAI 537
+ L T EG KY+L++ V HHG++ S GHYT D R +W+ DD S+ +
Sbjct: 778 EALSRQKRQTLGEEGMPKYKLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTSIRRV 837
Query: 538 GTSKV 542
+ V
Sbjct: 838 RSEDV 842
>gi|302656314|ref|XP_003019911.1| hypothetical protein TRV_06012 [Trichophyton verrucosum HKI 0517]
gi|291183687|gb|EFE39287.1| hypothetical protein TRV_06012 [Trichophyton verrucosum HKI 0517]
Length = 837
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 184/371 (49%), Gaps = 51/371 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
L PRGL+N+GN+C++N+ + R K+ P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSIGR---------------RAAHSFKSDSPLVDAMIMFLREFRV 416
Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
SS + K + + G F P V+++ R ++DAQEFL
Sbjct: 417 IDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHLP-------RFRDMRQDAQEFLG 469
Query: 313 FIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRTQ- 363
F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 470 FLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRSSG 529
Query: 364 -SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 530 DSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 589
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
+ G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL+L
Sbjct: 590 TMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPLEL 647
Query: 481 VLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+ R+ L + KY L+ + HHG+ S GHYT + R + +W+ FDD
Sbjct: 648 EIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRFDD 707
Query: 532 ASVTAIGTSKV 542
+ + + +V
Sbjct: 708 TYIRRVRSEEV 718
>gi|241956180|ref|XP_002420810.1| ubiquitin carboxyl-terminal hydrolase, putative; ubiquitin
thioesterase, putative [Candida dubliniensis CD36]
gi|223644153|emb|CAX40960.1| ubiquitin carboxyl-terminal hydrolase, putative [Candida
dubliniensis CD36]
Length = 639
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 189/410 (46%), Gaps = 85/410 (20%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVS 254
D+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + T+ I G P L A + F +
Sbjct: 263 DIKPRGLTNTGNICYMNSILQILIHCDPFSRLLKLIETKSIGSLGPSSTPLLDATIAFFN 322
Query: 255 DF-DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
F DT G S PF + + L F S +QEDA+EFL +
Sbjct: 323 QFQDTSKGAVS----------AEPFYTHLTK--LDKF------SHLKWGQQEDAEEFLGY 364
Query: 314 IMDQMHDELLKLQGESTSINGANT----ALVSLAEED----------------------- 346
+D +++E L +I NT +L+ +D
Sbjct: 365 YLDALNEEFL------AAIKQLNTPQVDSLIQAYAQDHDAEAVATFKFNVKSTIKRIKND 418
Query: 347 -------EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQP 395
EW V K S+ T+ + P+ L+ IFGG+ KSVV ++ + S T+ P
Sbjct: 419 TDQDTDGEWSQVNKKKNSSTTKIE-IDPTPLNMIFGGEFKSVVTIPKQSSSFQKSITLDP 477
Query: 396 FLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILIL 455
F + LDI S V TIEDA + + E + S T N + KK I+ +LI+
Sbjct: 478 FQHVQLDISS--VDTIEDAFKHLNESEII-----SYTNNNKEIQVKKQTFIEKFPNVLII 530
Query: 456 HLMRFSYGSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSK 512
HL RFSY G KL K V + L++ ++++ + +Y+LV+ V HHG
Sbjct: 531 HLKRFSYLKDHEIGVEKLRKKVDYNHDLIIPKEVMAKDTGVPIRYQLVSVVYHHGSSADA 590
Query: 513 GHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 555
GHYT+D Y QW DD +V I +VL+ AY+L Y+++
Sbjct: 591 GHYTSDI-YNVGQWWRIDDTAVKQINNEEVLNAGTEENIKNAYILLYRRI 639
>gi|294654613|ref|XP_456675.2| DEHA2A07942p [Debaryomyces hansenii CBS767]
gi|199429014|emb|CAG84631.2| DEHA2A07942p [Debaryomyces hansenii CBS767]
Length = 876
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 201/467 (43%), Gaps = 125/467 (26%)
Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI----PKAGYPT 245
N P+ VK PRGL N+GN+C++NA LQ L+ C PF + L+ + ++ I K+ P
Sbjct: 434 NCPIFRVK---PRGLTNTGNICYMNAILQVLLYCEPFNKTLKLVESKSIGSLSQKSTTPL 490
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
L + F +F PS +P SP F L T + + + +QE
Sbjct: 491 LDIVIKFWKEFSQPSSM-------------KPISPDNFYMSL--ITHEKFSHLKWG-QQE 534
Query: 306 DAQEFLSFIMDQMHDELL--------------------------KLQGESTSINGANTAL 339
DA+EFL + +D +H+E + +L+ + +N NT
Sbjct: 535 DAEEFLGYFLDGLHEEFVGSIKGLNTPQTDLLIQQFQQQNEDIDQLKLNAFKLNIKNTMK 594
Query: 340 -----------------VSLAEEDEWETVGPKNKS-AVTRTQSFLPSALSDIFGGQLKSV 381
VS E + W VG NK + RT PS ++ IFGGQ +SV
Sbjct: 595 IIKKSKSENQDTTHQEEVSDHESNGWSEVGSNNKKISAKRTVEIEPSPITTIFGGQFRSV 654
Query: 382 VKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
++ NK S T+ PF + LDI ++ T+EDA + + PEN+ Y++SS V
Sbjct: 655 LQIPKNKESQSITLDPFQCIQLDISDSSITTVEDAFKQLNEPENI-PYKSSSNKE---VI 710
Query: 440 AKKSVKIQTLSKILILHLMRFSY------------------GSQGS------TKLHKSVR 475
AKK I L ILI+HL RFSY S GS KL K +
Sbjct: 711 AKKQTFIDQLPNILIIHLKRFSYQQEKEKESTPSNEQSSNTSSNGSRPLGSIEKLRKKIE 770
Query: 476 FPLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADA----------- 519
+ L + ++L +P + Y+L V HHG GHYT+D
Sbjct: 771 YSHHLTIPNEVL-SPLYKHSGNISNHYKLFGVVYHHGVSAEGGHYTSDVLRKSSVFDNEE 829
Query: 520 ----RYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 555
+ ++QW+ DD +T + +VL+ AY+LFY++
Sbjct: 830 ESNDKKVDNQWIRIDDTQITELEKDEVLNGGDEETTKNAYILFYQKT 876
>gi|358388036|gb|EHK25630.1| hypothetical protein TRIVIDRAFT_113185, partial [Trichoderma virens
Gv29-8]
Length = 877
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 183/364 (50%), Gaps = 48/364 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
L PRGLIN+GN+C++N+ + + S F K+ P + A + F+ +++
Sbjct: 445 LEPRGLINTGNMCYMNSVIGKKAAHS-F-------------KSETPLIDALIMFMREYNV 490
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISG--------RPRQEDAQE 309
K + SV + R E + FTP+ V ++I R Q+DA+E
Sbjct: 491 ------LKSSASVDQLNRALKSEDLERYGEPFTPEFVYDAIRQLSRFASMRRGHQQDAEE 544
Query: 310 FLSFIMDQMHDEL------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
FL F++ + DE L + E + A+T S+A D+W VG K ++AV+R
Sbjct: 545 FLGFLLQSLDDECTHVMKDLPVGHEEVPSSDASTG-GSVAASDDWLEVGRKQRAAVSRLS 603
Query: 364 SFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
S ++ IFGG L+S + G K S T + + L LDI S V + DALR + PE
Sbjct: 604 GHNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIGSPDVRNVVDALRGLTRPE 663
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
L+G S G VTA K V I+TL +LILHL RF + ++ G+ K+ K + +PL+L
Sbjct: 664 RLQGDFNSPRGKD--VTATKQVFIETLPPVLILHLKRFQFDAEGHGTVKIWKKIGYPLEL 721
Query: 481 VLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
+ R+ L A +Y+L++ V HHG++ S GHYT D R + +W+ DD
Sbjct: 722 EIPREALSRQKRQNLDDASMPRYKLISVVYHHGKNASGGHYTVDVRRQDGREWIRLDDTV 781
Query: 534 VTAI 537
+ I
Sbjct: 782 IRRI 785
>gi|367008410|ref|XP_003678705.1| hypothetical protein TDEL_0A01620 [Torulaspora delbrueckii]
gi|359746362|emb|CCE89494.1| hypothetical protein TDEL_0A01620 [Torulaspora delbrueckii]
Length = 795
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 201/451 (44%), Gaps = 98/451 (21%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLT---AFV 250
S++++ PRG+IN N+CF+++ +Q L+ C PF+ +L + TR++ +AG P T A V
Sbjct: 351 SIREVAPRGIINRANICFMSSVMQVLLYCKPFINILNVVGTRNLNARAGTPECTLLDACV 410
Query: 251 GFVSDFDTPSGGSSKKKNI---------SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 301
F FD S +K + SV I P F + L P + G
Sbjct: 411 NFYKQFDKERLESERKPQLKSKQQQTVNSVASIADAIKPDDFYSALSKI-PKFKDLKWGH 469
Query: 302 PRQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALV------------ 340
QEDA+EFL+ ++DQ+H+E + ++ SIN ++
Sbjct: 470 --QEDAEEFLTHLLDQLHEEFISFIDCLTDNEISNLLQSINDEELKIILHQKSTKIQECR 527
Query: 341 -----------------SLAEEDE-----WETV------GPKNKSAVTRTQSFLPSALSD 372
S+ ++D W V G KNK+A RT PS +S
Sbjct: 528 IYKNPSASLKELIIKYGSINDDDNEDGNGWHEVSGTSKKGKKNKTAAKRTVEVEPSPMSC 587
Query: 373 IFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
+FGGQ +SV+ NK S T+ PF + LDI +V+ +E A + FS E L S
Sbjct: 588 LFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISERSVNDLETAFKKFSEYELLP--FKS 645
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------KLHKSVR 475
S+GN V AKK I L ++L++ L RF + + K+ K +
Sbjct: 646 SSGND--VEAKKQTFIDKLPQVLLIQLKRFQFINNTDKDNSMINYNAYNGRIEKIRKKIN 703
Query: 476 FPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDD 531
+ +L++ + + + +A E R+Y L + HHG GHYTAD + D+W DD
Sbjct: 704 YEHELMIPIESISSTNALRDEDRQYSLSGVIYHHGLSSDGGHYTADVYHKETDKWYRIDD 763
Query: 532 ASVTAIGTSKVLH--------DQAYVLFYKQ 554
++T + VL AY+L Y++
Sbjct: 764 INITEVQKDSVLKGGEDGVDSRTAYILMYQK 794
>gi|449018518|dbj|BAM81920.1| similar to ubiquitin carboxyl-terminal hydrolase 10
[Cyanidioschyzon merolae strain 10D]
Length = 633
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 186/413 (45%), Gaps = 74/413 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-----RTRDIPKAGYPTLTAFVGFVSDFD 257
G +N+GN C+LNA LQAL++ F L RD+ + L A G++ D
Sbjct: 231 GFVNTGNSCYLNAVLQALLAIDEFRLTWTALGALLPTQRDLLEKCNCHLVA--GWLRLID 288
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP------DVPNSISGRPRQEDAQEFL 311
+ + L GR F A P + S G QEDAQE L
Sbjct: 289 EWQALCQQTR----LQRGR------FGAAAPMLRPTYFWENERLASTVGSGHQEDAQELL 338
Query: 312 SFIMDQMHDELLKLQ---GESTSINGANTALV-SLAEED-----EWETVGPKNKSAVTRT 362
++D +H ELL+L+ GE + + A SL + D EWETV + +SA+ RT
Sbjct: 339 MIMLDGLHSELLELRSLLGEKSKLASLERAASPSLTDSDATSDTEWETVDRRGRSAIVRT 398
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
+ ++ IFGG L+S V+ G K SA +PFL+L LDI + + T++DA R F PE
Sbjct: 399 HQVRKTFITSIFGGALRSEVRKAGAKRSAVREPFLMLSLDIEDQRIRTLDDAFRYFMEPE 458
Query: 423 NLEG-------YRTSSTGNAGVVTAKKSVKIQT-LSKILILHLMRFSYGSQGS---TKLH 471
LE RT + A + +K V + T L + LI+HL RFS S G+ KLH
Sbjct: 459 FLEAPDERDSSARTRTRVAANLDPLRKHVTLDTPLPQALIIHLKRFSVASDGTGQGKKLH 518
Query: 472 KSVRFPLQLVLGRDLL--VTPSAE-----GRKYELVATVTHHGRDPSKGHYTADA----- 519
K + FP Q VL P A+ R+Y LVA +TH G D + GHY AD
Sbjct: 519 KELSFPPQFVLNASWFSAAVPKAQLGEACSRRYRLVAVITHLGTDLANGHYIADVLASGT 578
Query: 520 -----------------RYFNDQ--WLHFDDASVTAIGTSKVLHDQAYVLFYK 553
R + W DD V + S VL AYVL Y+
Sbjct: 579 NSTWSLSKSRNAPRGLTRSVDADAIWWQCDDQDVQMVSASTVLSRAAYVLVYR 631
>gi|393220282|gb|EJD05768.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 1072
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 191/393 (48%), Gaps = 49/393 (12%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG----------YPT 245
V + PRGL+N+GN+CF NA LQ L+ PF +L EL + I G P
Sbjct: 516 VPQIRPRGLVNTGNMCFANAVLQTLVYTPPFFRLFTEL-GKFIDGTGPNATKWAGKDTPL 574
Query: 246 LTAFVGFVSDFDTPSGGSSK--KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR 303
+ A V F+ +F SS+ +++ D F PS +K + N G+
Sbjct: 575 VDATVEFLKEFKPKVKDSSRDSQEDDEDYDAIDSFIPSYVYDAMKEKS-RFDNMGGGQ-- 631
Query: 304 QEDAQEFLSFIMDQMHDELLKLQG---ESTSINGANTALVSLAEEDEWETVGPKNKSAVT 360
QEDA+EF F +D + +ELL + + + I + S +E D+W VG KNK V
Sbjct: 632 QEDAEEFFGFFLDTLEEELLAISKSLTDGSQIKSSGQERNS-SEGDDWLEVGKKNKPVVA 690
Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
R+ + S ++ IFG + +S +K G + S V+ + L LDI E V +IEDALR S
Sbjct: 691 RSTKSVDSPMTRIFGFKFRSTLKVPGQRDSVMVEDWKSLKLDIQREQVESIEDALRYISH 750
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPL 478
P+ ++ +S T +V A + V + TL IL+ HL RF Y + K+HK V +
Sbjct: 751 PQPVQ--MSSVTKGGALVEASQQVLVDTLPPILVCHLKRFLYDTTAKDVIKVHKQVTYGP 808
Query: 479 QLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTADARYFN----------DQ 525
+L + D ++P +A KY+L A + GHYT D + N +
Sbjct: 809 ELEVPSD-AISPARRTAHPVKYKLFAA--------AGGHYTLDVLHPNRNADTNAKPREG 859
Query: 526 WLHFDDASVTAIGTSKVL---HDQAYVLFYKQV 555
W+ DD V+ + T V D AY+LFY+++
Sbjct: 860 WIRIDDELVSDLRTEDVFGTDRDCAYLLFYRRI 892
>gi|238489993|ref|XP_002376234.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
gi|220698622|gb|EED54962.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
Length = 411
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 150/266 (56%), Gaps = 31/266 (11%)
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQGE--STSINGANTALVSLAEE---------DEWE 349
R Q+DAQEFL F++++MH+E + + ST +GA SL+EE D W
Sbjct: 52 RGHQQDAQEFLGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWL 107
Query: 350 TVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
VG K K AVTR+ + S + IFGGQ++S K GNK S T++P+ L LDI S
Sbjct: 108 EVGHKQKPAVTRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPE 167
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--Q 465
++ I DAL+ + PE+++G SS G VTA K + I+ L +LILHL RF Y S +
Sbjct: 168 INNIVDALKGLTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTR 225
Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTA 517
G+ K+ K V +PL L + R++L P+ A+G KY L+ + HHG++ S GHYT
Sbjct: 226 GTQKIWKKVGYPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTV 284
Query: 518 DARYFN-DQWLHFDDASVTAIGTSKV 542
D R + +W+ DD + + + V
Sbjct: 285 DVRRQDGREWIRLDDTVIRRVRSEDV 310
>gi|392595347|gb|EIW84670.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 917
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 186/409 (45%), Gaps = 65/409 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIP--------------KAGYPTLT 247
GL+N+GN+CF N LQ L+ C PF +L EL R D+ + P +
Sbjct: 511 GLVNTGNMCFANVVLQVLVYCPPFWRLFTELGRLVDVDGEKDKHGEKGKQKRETKTPMID 570
Query: 248 AFVGFVSDF--DTPSGGSSK-------KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI 298
A + F+ +F P G K ++ + F P++ LK N
Sbjct: 571 ASIRFLREFMPKKPVEGKGKGVDREYYRQEEDEQEFYSSFVPTVVYDALKEKK-QFDNMR 629
Query: 299 SGRPRQEDAQEFLSFIMDQMHDEL------LKLQGESTSINGANTALVSLAEEDEWETVG 352
G QEDA+EFL F +D + +E L + NG + +++D W VG
Sbjct: 630 GGH--QEDAEEFLGFYLDTLEEEFNIMSSSLAPPAPRPAQNGHVPSGNEASQDDGWLEVG 687
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
K + VTRT S ++ IFGG+ +S ++ K SA V+ + L LDI E + TI+
Sbjct: 688 KKQRPTVTRTVKSTESPITRIFGGKFRSTLRVPHQKDSAVVEDWRSLRLDIQREQIATIK 747
Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKL 470
DAL S P +++ TS T + A + V ++ L +LILHL RF Y + G K+
Sbjct: 748 DALACISHPSSVQ--VTSVTKPGVTLDATQQVHVEALPPVLILHLKRFLYDANAGGVAKV 805
Query: 471 HKSVRFPLQLVLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFN-- 523
K V F +L +G +L+ A G+K Y+L + HHG S GHYT D + N
Sbjct: 806 CKHVSFGPELEIGSELM----APGKKVLTTRYKLFGALYHHGLSASGGHYTLDVLHPNVD 861
Query: 524 ----------DQWLHFDDASVTAIGTSKVL-------HDQAYVLFYKQV 555
+ W+ DD V+ + V H AY+LFY++V
Sbjct: 862 MASGGNTKPREGWIRIDDELVSDVRAEDVFGEQQAPDHRHAYLLFYRRV 910
>gi|406607793|emb|CCH40898.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 869
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 191/428 (44%), Gaps = 92/428 (21%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVGFVS 254
++PRGL+N+GN+CF+++ LQ L+ C PF ++L + R I + P + A + F
Sbjct: 463 IIPRGLVNTGNICFMSSILQLLLYCQPFYKILNVISIRTIHSINGTSSTPLIDALIEFYK 522
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR------PRQEDAQ 308
+F+ KK G P F + S++ R +QEDA+
Sbjct: 523 NFNIKLDNPDKK-------FGDSLVPEEFYKKI---------SLNERFQHLKWGQQEDAE 566
Query: 309 EFLSFIMDQMHDELLK--------------------------------------LQGEST 330
EF +++D +H+E + + +
Sbjct: 567 EFFGYLLDGLHEEFISSVKSIKPTETKTLIDSITTEDVRQSIRQSLKQFSDDDDFKSSNE 626
Query: 331 SINGANTALVSLAEEDEWETVG-PKNKSAVTRTQSFLPSALSDIFGGQLKSV--VKAQGN 387
S G N+ +L +D W VG KNK + RT PS + +FGGQ +S+ + Q
Sbjct: 627 SNGGINSTSNNLTSDDGWHEVGSTKNKISAKRTVEVKPSPIRQLFGGQFRSILDIPKQRE 686
Query: 388 KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQ 447
S T+ PF + LDI ++++T+EDA + S N+E S + V+ AKK I
Sbjct: 687 SQSITLDPFQQIQLDISDDSINTLEDAFKNIS---NIEEIPYKSNDGSEVI-AKKQTFID 742
Query: 448 TLSKILILHLMRFSYGSQGSTKLH-------KSVRFPLQLVLGRDLLVTPSAE-----GR 495
L ++L++HL RFS+ S+ + +L+ K + + +L + + +++PS
Sbjct: 743 KLPEVLVVHLKRFSFISKSNNQLYGHIEKIRKKISYKSELKIPEE-VISPSTRKFNSINL 801
Query: 496 KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLH-------DQA 547
Y+L V HHG GHYT D D+W+ FDD +T + VL A
Sbjct: 802 NYKLTGIVYHHGISSEGGHYTVDVLNQSKDEWIRFDDTIITELSLDDVLSGGDDDGVKTA 861
Query: 548 YVLFYKQV 555
Y+L Y++V
Sbjct: 862 YILMYERV 869
>gi|358390185|gb|EHK39591.1| hypothetical protein TRIATDRAFT_82240 [Trichoderma atroviride IMI
206040]
Length = 862
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 188/362 (51%), Gaps = 52/362 (14%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
L PRGLIN+GN+C++N+ +A S K+ P + A + F+ ++
Sbjct: 439 LEPRGLINTGNMCYMNS--RAAHSF----------------KSETPMIDALIMFMREYRV 480
Query: 259 PSGGSSK---KKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDAQE 309
+S +N+ D+ G PF+P +++A+ L F +S+ R Q+DA+E
Sbjct: 481 LKSSASADQLNRNLKSEDLERYGEPFTPEFVYDAIRQLSRF-----DSMR-RGHQQDAEE 534
Query: 310 FLSFIMDQMHDELLKLQGE----STSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQS 364
FL F++ + DE + + + +NT+ S+A D+W VG K ++AV+R
Sbjct: 535 FLGFLLQSLDDECTHVMKDLSIVPEEVPSSNTSTGGSVAASDDWLEVGRKQRAAVSRLSG 594
Query: 365 FLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
S ++ IFGG L+S + G K S T + + L LDI S V + DALR + PE
Sbjct: 595 HNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIQSPDVRNVVDALRGLTRPER 654
Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLV 481
++G S G V A K V I++L +LILHL RF + ++ G+ K+ K + +PL+L
Sbjct: 655 IQGDFNSPRGKD--VVATKQVFIESLPPVLILHLKRFQFDAEGHGTVKIWKKIGYPLELE 712
Query: 482 LGRDLLVTPSAEGR-----KYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVT 535
+ R+ L S + R +Y+L++ V HHG++ S GHYT D R + +W+ DD +
Sbjct: 713 IPREAL---SRQKRDSSMPRYKLISVVYHHGKNASGGHYTVDVRRQDGREWIRLDDTVIR 769
Query: 536 AI 537
I
Sbjct: 770 RI 771
>gi|343961587|dbj|BAK62383.1| ubiquitin carboxyl-terminal hydrolase 10 [Pan troglodytes]
Length = 252
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 16/237 (6%)
Query: 331 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKAS 390
S+N EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K S
Sbjct: 17 SVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKES 76
Query: 391 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLS 450
AT+QPF L LDI S+ + T++DAL A E+++GY T + V + V ++ L
Sbjct: 77 ATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLP 133
Query: 451 KILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATV 503
+L+LHL RF Y + G KL K++ +P+ L + ++LL +P + R Y L A V
Sbjct: 134 PVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVV 192
Query: 504 THHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
HHG + GHYT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 193 YHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 249
>gi|452822851|gb|EME29867.1| ubiquitin carboxyl-terminal hydrolase 1 [Galdieria sulphuraria]
Length = 594
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 41/288 (14%)
Query: 304 QEDAQEFLSFIMDQMHDEL----------------LKLQGESTSING------ANTALVS 341
QED+QEFL I++++H+E+ L+ G+S +N +
Sbjct: 303 QEDSQEFLIHILNELHEEIRTLRKYLEEHLLSSSELQTDGDSEYPKSGIEHHLSNLSFCR 362
Query: 342 LAEEDE--WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
+ D+ WE VG K KSA+ R F S +S IFGG L+S + G+K+S + +PFL L
Sbjct: 363 DNDSDDGFWEEVGRKGKSAIIRPFQFQSSWISFIFGGILRSELHRIGSKSSVSREPFLFL 422
Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
LDI S VH + DALRL+ PE+L+ + +T V A+K V I+ L ++ IL L R
Sbjct: 423 ELDIQSPHVHNLYDALRLYIEPESLDDVFSETTKQK--VQARKQVTIERLPRVFILQLKR 480
Query: 460 FSY--GSQGSTKLHKSVRFPLQLVLGRDLLVTPSA----EGRKYELVATVTHHGRDPSKG 513
F+ G + KL K + FP+ L L LL + + R Y L A VTH GR+ G
Sbjct: 481 FTLRNGDEVYRKLGKHIDFPVDLCLPSMLLTFSHSYTKPQNRSYSLAAVVTHLGRELVGG 540
Query: 514 HYTADARYF---------NDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
HY D R+ WL+ DD+S++ I VL+ QAY+LFY
Sbjct: 541 HYICDIRWRVPLKSGQREETVWLNCDDSSISCISEKTVLNRQAYLLFY 588
>gi|390597718|gb|EIN07117.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 980
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 193/431 (44%), Gaps = 90/431 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSP----FVQLLQELRTR---DIPKAG------------- 242
GLIN+GN+CF NA LQ L+ C P F +L + L T D P G
Sbjct: 556 GLINTGNMCFANAVLQVLVYCPPFWRLFRELGKYLPTTVAFDGPVVGKEREKEKDEKKSP 615
Query: 243 YPTLTAFVGFVSDFDTPSG---GSSKKKNIS------------------------VLDIG 275
P + A V F+S+F P+ G K K+ +D
Sbjct: 616 VPLVEATVQFLSEF-VPAEDKEGHGKDKDRGREGGKGKKSGKGREVSMDGEDEDWAMDS- 673
Query: 276 RPFSPSMFEAVL---KNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTS 331
F PS V+ K F ++G QEDA+EF F +D + +ELL L +
Sbjct: 674 --FIPSTVYDVVRATKRF-----GGMTGG-HQEDAEEFFGFYLDTLEEELLSILHSIAPE 725
Query: 332 INGANTALV---------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+N A + V S ED W VG KN+S VTRT S ++ +FGG+ +S +
Sbjct: 726 LNAAASPAVPDEPRDVAGSSQHEDGWLEVGKKNRSVVTRTTKSTESPITRLFGGKFRSTL 785
Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 442
+A K S V+ + L LDI E VHTI DAL S P+ ++ + G VV A +
Sbjct: 786 RAPHQKDSVIVEDWRELQLDISREQVHTIADALAHLSHPQPVQIALPTRPGY--VVDATQ 843
Query: 443 SVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG--RKYE 498
V I L IL+LHL RF Y ++ K+ K V +LV+ D++ G +Y+
Sbjct: 844 HVLIDALPPILVLHLKRFLYDTKVGDVVKIGKKVALEPELVIPADIIAPTRRAGPPARYK 903
Query: 499 LVATVTHHGRDPSKGHYTADARYFN--------DQWLHFDDASVTAIGTSKVLHDQ---- 546
L + V HHG S GHYT D + N + W+ DD V+ I V Q
Sbjct: 904 LFSVVYHHGLSASGGHYTLDVLHPNRDLSTKPREAWIRIDDELVSDIRPEDVFGGQERDD 963
Query: 547 --AYVLFYKQV 555
AY+LFY++V
Sbjct: 964 RCAYLLFYRKV 974
>gi|254567223|ref|XP_002490722.1| Ubiquitin-specific protease that interacts with Bre5p [Komagataella
pastoris GS115]
gi|238030518|emb|CAY68442.1| Ubiquitin-specific protease that interacts with Bre5p [Komagataella
pastoris GS115]
gi|328351106|emb|CCA37506.1| ubiquitin carboxyl-terminal hydrolase 10 [Komagataella pastoris CBS
7435]
Length = 591
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 187/440 (42%), Gaps = 96/440 (21%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVGFVS 254
LLP GLIN GN+C++N+ LQ + C P ++L+ +R + I + P L A +
Sbjct: 163 LLPHGLINRGNICYMNSVLQLFIFCKPLFRVLRCIREKTIAHVSGTSDTPILDALTLLLE 222
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
F S SV D G P S F + + P + G+ QEDA+EF+ ++
Sbjct: 223 RFQHKESHESA----SVDDFGEPLSQESFYTSIISL-PKFSHLRWGQ--QEDAEEFMGYV 275
Query: 315 MDQMHDELLKLQGEST---------SINGANTA-LVSLA--------------------- 343
+D++H+E + + T S+N + +S A
Sbjct: 276 LDELHEEFISQMTKLTDTEKSQLLASVNNVESKKQISEALNLIQKKPGSSPKSKYDTEDK 335
Query: 344 -EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV--VKAQGNKASATVQPFLLLH 400
++D W VG NK + RT PS +++IFGGQ +SV V Q N S T+ PFL +
Sbjct: 336 HDDDGWCEVGSNNKLSAKRTVEVKPSPITEIFGGQFRSVLNVPRQKNGRSITLDPFLHVQ 395
Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
LDI V ++EDA S E + Y++S N +V A K I L ++LI+HL RF
Sbjct: 396 LDISEPNVSSVEDAFTYLSQIEVI-PYKSS---NGNLVQATKQNMIDKLPEVLIIHLKRF 451
Query: 461 SYGSQGST----------------------------------------KLHKSVRFPLQL 480
SY Q S+ K+ K ++F L
Sbjct: 452 SYVRQESSSDVGTPVPQSSSPSPSPSPSGSTQNGFHSKNNDAEMGCIQKIQKIIKFGHAL 511
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT----- 535
+ L + +Y+L + HHG GHYT D + D WL DD ++
Sbjct: 512 TIPEACL-SRGETNNEYQLQGVIYHHGNSTEGGHYTIDVKNDRDSWLRIDDTNIVPLTPQ 570
Query: 536 -AIGTSKVLHDQAYVLFYKQ 554
+G S AY+L Y++
Sbjct: 571 QVVGASTNDGKDAYILVYQK 590
>gi|50290211|ref|XP_447537.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526847|emb|CAG60474.1| unnamed protein product [Candida glabrata]
Length = 816
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 210/462 (45%), Gaps = 101/462 (21%)
Query: 188 AINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPT- 245
A NE +++++PRG+IN+ N+CF+++ LQ L+ C+PFV +L + TR++ K+G +
Sbjct: 360 AKNEDKLPIREIIPRGIINNANICFMSSVLQVLLYCAPFVDILNVVSTRNMNAKSGSSSA 419
Query: 246 --LTAFVGFVSDFDTPSGGSSKKKNISVLDIG-RPFSPSMFEAVLKNFTPD-VPNSISGR 301
L A + FD + K+K G + SP + ++ + PD S+S
Sbjct: 420 KLLDACLTIYKKFDKANYEKEKEKESEKEKPGSKKSSPPAYASITEAVNPDEFYRSLSTI 479
Query: 302 PR--------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED------- 346
P+ QEDA+EFL+ ++DQ+H+EL+ +S S N L S+ +ED
Sbjct: 480 PKFKDLRWGHQEDAEEFLTHLLDQLHEELISAI-DSLSENEILNLLQSIHDEDLKIYIIR 538
Query: 347 --------EW-ETVGPKNKSAVT---------------------------------RTQS 364
E+ + + P+ K + RT
Sbjct: 539 NLSRYKDAEFIKNMSPQLKDQINKYGTISDDSEEGNGWHEVSGSSKKGKKTKTAAKRTVE 598
Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
F+PS +S++FGGQ +SV+ NK S T+ PF + LDI V ++E AL+ FS E
Sbjct: 599 FIPSPISNLFGGQFRSVLDIPQNKESQSITLDPFQTIQLDISDPGVDSLEAALKKFSEYE 658
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-------------- 468
L SS+GN V AKK I L +IL++ L RFS+ S
Sbjct: 659 LLP--FKSSSGND--VEAKKQTFIDKLPQILLIQLKRFSFISNADKDNGMTNYNAYSGRI 714
Query: 469 -KLHKSVRFPLQLVLGRDLLVTPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFND 524
K+ K + + L + + L + + + YEL + HHG P GHYTAD F+
Sbjct: 715 EKIRKKISYGHTLEIPDETLASSALRNNSSKTYELSGVIYHHGMSPDGGHYTADV--FHK 772
Query: 525 Q---WLHFDDASVTAIGTSKVLH--------DQAYVLFYKQV 555
Q W DD ++T + VL AY+L Y+ V
Sbjct: 773 QTKTWYRIDDVNITKLEDDDVLKGGEDNMDSRTAYILMYQNV 814
>gi|448114672|ref|XP_004202635.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
gi|359383503|emb|CCE79419.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
Length = 868
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 196/458 (42%), Gaps = 110/458 (24%)
Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 249
N PV +K RGL N+GN+C++NA LQ L+ C PF ++L+ + T+ + G + T
Sbjct: 427 NTPVYKIKK---RGLTNTGNICYMNAILQILLYCEPFNKMLKLIETKTVGNLGNKSSTPL 483
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR---QED 306
+ V F S + N S + F+ F L + N + QED
Sbjct: 484 LDLVIKFFNEFSSSQRNSNAS----NKAFAVENFYLSL------IANEKFQHLKWGQQED 533
Query: 307 AQEFLSFIMDQMHDELLKLQGESTS--ING------------------------------ 334
A+EFL +++D +H+E + T+ ++G
Sbjct: 534 AEEFLGYLLDGLHEEFVNATKSLTTPQVDGLIQNFQKMHDGNDDYTVHEFKANVKNTMKI 593
Query: 335 -------ANTALVSLAEEDEWETVGPKN-KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG 386
AN + ++ D W VG N K + RT PS +++IFGGQ +SV++
Sbjct: 594 LKKYAEPANEREDAESDNDGWAEVGSNNRKVSAKRTVEIEPSPITNIFGGQFRSVLQIPK 653
Query: 387 NKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 444
+K S T+ P+ + LDI A+ TIE+A + + PE + Y++++ V AKK
Sbjct: 654 SKESESITLDPYQCIQLDISDPAIGTIEEAFKHMNEPEKIP-YKSANKE----VIAKKQT 708
Query: 445 KIQTLSKILILHLMRFSY---------------------GSQGSTKLHKSVRFPLQLVLG 483
I L L++HL RFSY G G KL K + + L +
Sbjct: 709 FIDQLPNALVIHLKRFSYQQGTRDGSDAGDDSAQPRSNGGIGGIEKLRKKITYSHTLTIP 768
Query: 484 RDLLV----TPSAEGRKYELVATVTHHGRDPSKGHYTADA---------------RYFND 524
++L SA G Y+L V HHG GHYT D + ++
Sbjct: 769 NEVLSPITQKQSANGYHYKLFGVVYHHGIGAEGGHYTCDVLRKSSLHDSQEESNDKKIDN 828
Query: 525 QWLHFDDASVTAIGTSKVLHD-------QAYVLFYKQV 555
+W+ DD V +I ++VL AY+LFY+++
Sbjct: 829 EWIRIDDTQVESIDKNEVLDSGSEESSKNAYILFYQKI 866
>gi|302422160|ref|XP_003008910.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
gi|261352056|gb|EEY14484.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
Length = 879
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 174/363 (47%), Gaps = 62/363 (17%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 253
+ VK + PRGL+N GN+C++N+ PF
Sbjct: 478 EKVKYVEPRGLVNIGNMCYMNS------RKGPF--------------------------- 504
Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+F P+ + + G F+P E + + PD R Q+DA+EF
Sbjct: 505 -EFQEPNTHPGR-------NYGTSFTP---EFIYQAIEPDKRFENMRRGHQQDAEEFFGL 553
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSL---AEEDEWETVGPKNKSAVTRTQSFLPSA- 369
++ + DE K+ G + S N + A S A D W VG K ++AVTR+ S
Sbjct: 554 LLQSLDDECAKVMGVA-SGNAPHPAPASANADATADGWLEVGAKQRAAVTRSSGASSSTP 612
Query: 370 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE--GY 427
++ IFGG L+S ++ G + S T +P+ L LDI + V + DAL+ +A E LE G+
Sbjct: 613 ITQIFGGLLRSELRVTGKQDSITTEPYQALQLDIGANDVRNVVDALKRLTAHEKLEGSGF 672
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL-----V 481
+ NA VV K I TL +LILHL RF + ++ G+TK+ K V +PL+L
Sbjct: 673 NSPHGKNATVV---KQTLIDTLPPVLILHLKRFHFDAEGGTTKIWKKVGYPLELEIPVQA 729
Query: 482 LGRDLLVT-PSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGT 539
L R + EG KY+L+A V HHG+ + GHYTAD R ++ +W+ DD + + +
Sbjct: 730 LARQWRASNKGGEGPKYKLIAVVYHHGKHANGGHYTADVRRQDEHEWIRLDDTVIRRVRS 789
Query: 540 SKV 542
V
Sbjct: 790 EDV 792
>gi|50552594|ref|XP_503707.1| YALI0E08844p [Yarrowia lipolytica]
gi|49649576|emb|CAG79296.1| YALI0E08844p [Yarrowia lipolytica CLIB122]
Length = 749
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 187/389 (48%), Gaps = 55/389 (14%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA---GYPTLTAFVGFVSDF- 256
PRG++N+GN+CF+N+ LQ L+ C PF +L+ +R + +P++ P A V F+ D+
Sbjct: 382 PRGIVNNGNVCFMNSILQILVHCLPFSRLIDLIREK-VPRSLDGDSPLTEAVVDFLDDYK 440
Query: 257 ----DTPSGGS----SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDA 307
+ +GGS SK +I++ S +++++ VP S R +QEDA
Sbjct: 441 RGAVNGVNGGSTPATSKLPDITI--------DSFYKSIVS-----VPRFSHFQRGKQEDA 487
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
+EFL +++D +H+E + + G AE W VG K K++ TR+ F
Sbjct: 488 EEFLGYLLDGLHEEFVAVIGAREEAAAKEEGATGSAE---WTQVGAK-KNSTTRSPQFPW 543
Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
S +SDIFGG+ +S + S ++PF ++HLD+ + + ++E + SA E +E
Sbjct: 544 SPVSDIFGGKFESNLDVPRQSVSKVLEPFHVIHLDVENPNITSVESGFKALSAKEQVE-- 601
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-----STKLHKSVRFPLQLVL 482
T G + A K ++ L +IL++ L RF+Y K++K + + L +
Sbjct: 602 -TFGEGGRPITGASKQTLLEELPRILVVQLKRFTYCGDDLMDLQVRKINKKISYGADLSV 660
Query: 483 GRDLLVTPSAE--------GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
+ L + + +Y LV V HHG + GHYT + +W DD +
Sbjct: 661 PMESLSLKAKQQFRASGGKSNQYNLVGVVFHHGTSTTTGHYTVNVLVGGTKWYRIDDVKI 720
Query: 535 TAIGTSKVLHDQ--------AYVLFYKQV 555
AI + AY+L Y++V
Sbjct: 721 EAIRNENWYAKEEDGKDDKTAYLLIYQRV 749
>gi|344299919|gb|EGW30259.1| hypothetical protein SPAPADRAFT_57083 [Spathaspora passalidarum
NRRL Y-27907]
Length = 511
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 187/415 (45%), Gaps = 92/415 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSDFD 257
PRGL N+GN+C++N+ LQ L+ C PF +LL+ + + I G P L A + + F
Sbjct: 129 PRGLANTGNICYMNSILQILLYCEPFNRLLKLIHDKSIGNLGASPTPMLDATIKLFNQFK 188
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--------QEDAQE 309
+ P SP F NS++ +P+ QEDA+E
Sbjct: 189 PDEESKT------------PISPDEFY-----------NSLTAQPKFSHLKWGQQEDAEE 225
Query: 310 FLSFIMDQMHDELL------------------KLQGESTSIN----GANTALVSLAEEDE 347
FL + +D +++E L L+ ++N T + + E +
Sbjct: 226 FLGYYLDGLNEEFLGVLKKLNTPMIDSLIQHYSLENGVETVNKFKYNVKTTMKKVRNESK 285
Query: 348 WE--------------TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN----KA 389
E VGPK K V RT P+ L+ IFGGQ KSV+ + +
Sbjct: 286 EENDESEDDDDEGEWNEVGPKKKIHVKRTVEVEPTPLNMIFGGQFKSVLTIPKSTNSFQK 345
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 449
S T PF + LDI SEA TIE AL + E + Y++S+ + KK + L
Sbjct: 346 SITFDPFQHVQLDI-SEA-STIEGALEHLNKVEAI-SYKSSNKE----IQIKKQTFLDKL 398
Query: 450 SKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHG 507
+LI+HL RFSY +Q KL K + + L++ +D+L T SAE KY L + V HHG
Sbjct: 399 PPVLIIHLKRFSYSNQDVAIEKLKKKIDYNHDLIIPKDVLST-SAE-IKYRLTSVVYHHG 456
Query: 508 RDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLH------DQAYVLFYKQV 555
GHYT D +D QW DDA+ I T V + AY+L YK+V
Sbjct: 457 SSADAGHYTTDVFKSDDSQWWRIDDANFKEISTDDVQNHGGDDIKNAYILLYKKV 511
>gi|320583155|gb|EFW97371.1| Ubiquitin-specific protease [Ogataea parapolymorpha DL-1]
Length = 493
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 185/436 (42%), Gaps = 106/436 (24%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSDF 256
L P GL+N+GN+C++NA LQAL +C PF Q+L +R + + + P + A V F
Sbjct: 81 LAPHGLVNNGNICYMNAILQALFACRPFSQMLFAVRHLSLGRLESHTPIMDALVALHDAF 140
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ K + VL +P+ F + P + G RQEDA+EFL +++D
Sbjct: 141 N--------KSSPEVL------TPTGFYGSIARL-PRFSHLKWG--RQEDAEEFLGYLLD 183
Query: 317 QMHDEL---LKLQGES------------TSINGANTALVSL----------AEEDEWETV 351
+H+E +K ES ++ N+AL + E++ W V
Sbjct: 184 GLHEEFVDSIKRLAESDIADLRASIKDPQTLKTLNSALEMIKTGQINGSTEKEDNGWMEV 243
Query: 352 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHT 410
G K AV R PS + +FGG +SV++ NK S+ T+ PF+ + L+I + ++
Sbjct: 244 GANQKMAVKRQVDVKPSPVVQMFGGHFRSVLQVPNNKKSSITLDPFMHVQLEISDKDINN 303
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-- 468
+ A F+ E + + G TAKK I L +LI+HL RFS+ + +
Sbjct: 304 LYTAFEKFATVEEI---------SYGDQTAKKQNLIDKLPTVLIIHLKRFSFVANDDSNE 354
Query: 469 ----------------------------------------KLHKSVRFPLQLVLGRDLLV 488
KLHK + +P +L L +
Sbjct: 355 NFNDYEIVSSKQRRNKTSASQTLPPVPTHTKTPETGGRIEKLHKKIEYPHRLTLPASCIS 414
Query: 489 TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD--- 545
E Y L A V HHGR +GHYTAD +D W DD VT I + +
Sbjct: 415 PNVMEEPTYRLTAVVYHHGRSTEEGHYTADVLGADDSWTRVDDTLVTRISAEDAVENGHG 474
Query: 546 -------QAYVLFYKQ 554
AY+L Y++
Sbjct: 475 GGATNGKSAYILMYEK 490
>gi|448112101|ref|XP_004202009.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
gi|359464998|emb|CCE88703.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
Length = 868
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 196/458 (42%), Gaps = 110/458 (24%)
Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 249
N PV +K RGL N+GN+C++NA LQ L+ C PF ++L+ + T+ + G + T
Sbjct: 427 NTPVYKIKK---RGLTNTGNICYMNAILQILLYCEPFNKMLKLVETKTVGNLGNKSSTPL 483
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR---QED 306
+ V F S + N ++ +PF+ F L + N + QED
Sbjct: 484 LDLVIKFFNEFSSSQRNSNGTI----KPFAVENFYLSL------IANEKFQHLKWGQQED 533
Query: 307 AQEFLSFIMDQMHDELLKLQGESTS--------------------------INGANTALV 340
A+EFL +++D +H+E + T+ N NT +
Sbjct: 534 AEEFLGYLLDGLHEEFVNATKSLTTPQIDGLIQDFQKMHDGSDDYTVREFKANVKNTMKI 593
Query: 341 -------------SLAEEDEWETVGPKN-KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG 386
+ ++ D W VG + K + RT PS ++ IFGGQ +SV++
Sbjct: 594 LKKYTEPASEREDTESDNDGWAEVGSNHRKVSAKRTVEIEPSPITSIFGGQFRSVLQIPK 653
Query: 387 NKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 444
+K S T+ P+ + LDI ++ TIE+A + + PE + Y+ ++ V AKK
Sbjct: 654 SKESESITLDPYQCIQLDISDPSIGTIEEAFKHMNEPEKIP-YKAANKE----VIAKKQT 708
Query: 445 KIQTLSKILILHLMRFSY---------------------GSQGSTKLHKSVRFPLQLVLG 483
I L +L++HL RFSY G G KL K + + L +
Sbjct: 709 FIDQLPNVLVIHLKRFSYQQGARDGSDAGDDSTQPRSNGGLGGIEKLRKKITYSHTLTIP 768
Query: 484 RDLLV----TPSAEGRKYELVATVTHHGRDPSKGHYTADA---------------RYFND 524
++L SA G Y+L V HHG GHYT D + ++
Sbjct: 769 NEVLSPITQKQSANGYHYKLFGVVYHHGIGAEGGHYTCDVLRKSSLHDSQEESNDKKIDN 828
Query: 525 QWLHFDDASVTAIGTSKVLHD-------QAYVLFYKQV 555
+W+ DD V +I ++VL AY+LFY+++
Sbjct: 829 EWIRIDDTQVESIDKNEVLDSGSEESSKNAYILFYQKI 866
>gi|363753770|ref|XP_003647101.1| hypothetical protein Ecym_5544 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890737|gb|AET40284.1| hypothetical protein Ecym_5544 [Eremothecium cymbalariae
DBVPG#7215]
Length = 834
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 207/464 (44%), Gaps = 106/464 (22%)
Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLT 247
E K++ ++PRG++N GN+CF+++ LQ L+ C PF+ +L + TR K+ P L
Sbjct: 378 ETTKAINTIVPRGILNKGNICFMSSVLQVLLFCKPFISMLNAVCTRTGTKSSCSLPPLLD 437
Query: 248 AFVGFVSDFD------------TPSGGSSK-KKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
A + F +FD + SG + K K ++ L + P F + + +
Sbjct: 438 ACLDFYKEFDKGNFEKERGEKQSISGNNGKASKGVTRLPLADVIDPESFYKSISKLS--M 495
Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELL---------------------KLQGE----- 328
+ QEDA+EFL+ +DQ+H+E + +L+ E
Sbjct: 496 FRELQW-GHQEDAEEFLTHFLDQLHEEFVSAINTLSSNEIMNLLQSISDDELKTEFIRSL 554
Query: 329 -----STSINGANTALVSLAE---------------ED--EWETV---GPKNKSAVTRTQ 363
S + + L +L E ED EW V G + K+AV RT
Sbjct: 555 PKYKSSDFVRKMSAELKTLIENYGSNPESESNSNGDEDICEWHEVSKKGKRAKNAVKRTM 614
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
PS + IFGG+ +SV+ NK S T+ PF LHL I V+ +E A + FS
Sbjct: 615 EVEPSPIMSIFGGEYRSVLDIPQNKESQSITLDPFYTLHLHISDPEVNDLESAFKKFSDF 674
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 468
E L Y+ S GN V AKK I L ++L++ L RF + + S
Sbjct: 675 EYLP-YKADS-GND--VEAKKQAFIDRLPQVLLIQLKRFEFVNNNSERRELVNYNAYNGR 730
Query: 469 --KLHKSVRFPLQLVLGRDLLVTPSAE------GRKYELVATVTHHGRDPSKGHYTADAR 520
K+ K +++ L + ++ L + +A+ Y+L V HHG S GHYTAD
Sbjct: 731 IEKICKWIKYDHDLTIPKEALSSINAKFLFSDNDTSYKLTGVVYHHGLSSSGGHYTADVL 790
Query: 521 YFNDQ-WLHFDDASVTAIGTSKVL-------HDQ-AYVLFYKQV 555
+ +++ W DD +VT I +V+ H + AY+L Y++
Sbjct: 791 HQDEEKWYRIDDTTVTEINKEEVVTGGEEGSHSRTAYILIYQRA 834
>gi|50307989|ref|XP_453994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643129|emb|CAG99081.1| KLLA0E01013p [Kluyveromyces lactis]
Length = 774
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 198/457 (43%), Gaps = 109/457 (23%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--PTLTAFVG 251
K + +L+PRG+ N G++CF+++ LQ L+ C FV LL + T + + P L A +
Sbjct: 329 KLITELVPRGIYNKGSICFISSVLQLLIHCRSFVNLLNVIHTTTVSRTNSVSPLLNACMD 388
Query: 252 FVSDFD----------------TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVP 295
FD T S S+ +NI +D PF S+ + P
Sbjct: 389 VFKRFDRETIVNELNETRENSKTKSKSSNLNENIISID-PEPFYKSI------STLPKFK 441
Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDEL----------------------------LKLQG 327
+ GR QEDA+EFL+ ++DQ+H+E LK
Sbjct: 442 DLTWGR--QEDAEEFLTHMLDQLHEEFIGSINTLNSNDILNIFQSLQEDDQKVFFLKYIS 499
Query: 328 ESTSINGANTALVSLA--------------EED-EWETV---GPKNKSAVTRTQSFLPSA 369
+ S + A SL EED EW+ V G K+K+A R S
Sbjct: 500 KYKSASFAEKPEQSLKALFEKYKQTNDLSDEEDKEWKEVSKKGKKSKNASKRITEVESSP 559
Query: 370 LSDIFGGQLKSVVKAQGNKASATV--QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
+S IFGGQ +SV+ NK S ++ PF + LDI S V +E A + FS E++E
Sbjct: 560 ISTIFGGQFRSVLDTPQNKESQSITYDPFQTIQLDISSPDVIDLESAFKKFSEQESIE-- 617
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST--------------KLHKS 473
SS+GN V AKK I L + L++ RFS+ SQ S K+ K
Sbjct: 618 LKSSSGND--VEAKKHTCIDKLPQALLIQFKRFSFVSQSSKNDLSNYNSFNGRIEKIRKM 675
Query: 474 VRFPLQLVLGRDLL------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQW 526
V++ +L + ++ + + S E KY L + HHG PS GHYT D + D+W
Sbjct: 676 VKYNHELTIPKESISPNLVSTSNSEESFKYYLSGVIYHHGVSPSGGHYTCDVYDKDLDKW 735
Query: 527 LHFDDASVTAI---------GTSKVLHDQAYVLFYKQ 554
DD +V I G S AY+L Y++
Sbjct: 736 YRIDDVNVDEIKNKEDILRSGDSASDSRTAYILLYEK 772
>gi|448534206|ref|XP_003870774.1| Ubp3 protein [Candida orthopsilosis Co 90-125]
gi|380355129|emb|CCG24646.1| Ubp3 protein [Candida orthopsilosis]
Length = 706
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 192/402 (47%), Gaps = 70/402 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGF 252
V D+ P+GL N+GN+CF+N+ LQ+L+ C PF +LL+ + T+ D+ + P + +
Sbjct: 333 VFDIKPKGLTNTGNICFMNSILQSLLYCKPFNKLLKLIETKSIGDLVISSQPLIDTTIKL 392
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
++F S K +S+ PF ++ + KNF +QEDA+EFL
Sbjct: 393 FNEF----KPSDNKLPVSI----EPFYSALSKH--KNF------QHLKWGQQEDAEEFLG 436
Query: 313 FIMDQMHDELLKLQGESTSIN---------------------GANTALVSLA------EE 345
+ +D +++E++ G +N T + + EE
Sbjct: 437 YYLDALNEEMI---GALKKLNTPQVDQLIQSYTQDDVAKFKYNVKTCIKRIKKDEQEDEE 493
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK----AQGNKASATVQPFLLLHL 401
EW VG +K +T+ + P+ L+ IFGG+ KSV+ + + S T+ PF + L
Sbjct: 494 SEWNEVG--SKKNITKIE-VDPTPLNMIFGGEFKSVITIPKVSSTFQKSITLDPFQHVQL 550
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
DI + ++IE+A + E + Y+ N V KK I+ L ++LI+HL RFS
Sbjct: 551 DISNS--NSIEEAFIHLNELETI-SYKG---NNNKEVEVKKQTFIEKLPQVLIIHLKRFS 604
Query: 462 YGSQGST---KLHKSVRFPLQLVLGRDLLVTPS-AEGRKYELVATVTHHGRDPSKGHYTA 517
Y KL K++ + L + ++L P +Y+L++ V HHG GHYT+
Sbjct: 605 YSKDQENAIEKLAKNISYDHTLTIPNEILSQPQGVTSNQYQLISVVYHHGSSADAGHYTS 664
Query: 518 DARYF-NDQWLHFDDASVTAIGTSKVLH---DQAYVLFYKQV 555
D F N+QW DD V I +VL + AY+L Y ++
Sbjct: 665 DTFDFENNQWWEIDDTIVKPIKDDEVLSSGINNAYILLYSKI 706
>gi|226290446|gb|EEH45930.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 897
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 30/264 (11%)
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVG 352
R Q+DAQEFL F+++++H+E + ++TS +T S A E + W VG
Sbjct: 541 RGHQQDAQEFLGFLLEELHEECTQAVKQATSTGPDIPTPVDTDSASAASEPSVEGWLEVG 600
Query: 353 PKNKSAVTRTQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
K K ++TR+ + S ++ IFGG+L+S + GNK S T++P+ L LDI S V
Sbjct: 601 HKQKPSITRSSGHVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVTN 660
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGST 468
I DAL+ + PE ++G SS G VTA K V I+TL +LILHL RF Y S +G+
Sbjct: 661 IIDALKGLTKPETMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTKGTQ 718
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGR--------------KYELVATVTHHGRDPSKGH 514
K+ K V +PL+L + R++ P KY L + HHG++ S GH
Sbjct: 719 KIWKRVGYPLELEVPREVF-PPHRRNNLLAAQGSGGGSGLPKYRLTGVIYHHGKNASGGH 777
Query: 515 YTADARYFN-DQWLHFDDASVTAI 537
YT D R + +W+ DD + +
Sbjct: 778 YTVDVRRQDGREWVRLDDTVIRRV 801
>gi|302309414|ref|NP_986805.2| AGR139Cp [Ashbya gossypii ATCC 10895]
gi|299788348|gb|AAS54629.2| AGR139Cp [Ashbya gossypii ATCC 10895]
gi|374110054|gb|AEY98959.1| FAGR139Cp [Ashbya gossypii FDAG1]
Length = 813
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 199/465 (42%), Gaps = 114/465 (24%)
Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLT 247
E K++K +PRG++N GN+CF+++ LQ L+ C PF+++L + R K+ P L
Sbjct: 362 ESAKAIKLGIPRGIMNKGNICFMSSVLQVLLFCEPFIEMLNVVHARTGVKSWTLLPPLLG 421
Query: 248 AFVGFVSDF----------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
+ + F +F D S G+ K + P F + P +
Sbjct: 422 SCLEFYKEFEKLHADKDKNDKQSNGNGKSAKANRSSQPDAIDPEHFYKCISKL-PMFKDL 480
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA-----LVSLAEED------ 346
G QEDA+EFL+ +DQ+H+E + +SIN + + L SL+++D
Sbjct: 481 QWGH--QEDAEEFLTHFLDQLHEEFV------SSINSLSCSDMIHLLQSLSDDDLKAEFV 532
Query: 347 ------------------------------------------EWETV---GPKNKSAVTR 361
EW V G K ++ V R
Sbjct: 533 RSLSKYKRAEFIKNMSSELKALIDKYGSALEYDTSEGSENSSEWHEVSKKGKKTRNTVKR 592
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKAS--ATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T PS + IFGG+ +SV+ NK S T+ PF LHL I V+ +E A + FS
Sbjct: 593 TTELEPSPIMSIFGGEYRSVLDIPQNKESHSITLDPFYTLHLHISDPEVNDLESAFKKFS 652
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST----------- 468
E L Y+ S GN V AKK + L ++L++ L RF + + S
Sbjct: 653 DFEYL-SYKADS-GND--VEAKKQAFLDRLPRVLLIQLKRFEFVNNSSERRELINYNAYN 708
Query: 469 ----KLHKSVRFPLQLVLGRDLLVTPSAE----GRK--YELVATVTHHGRDPSKGHYTAD 518
K+ K +R+ +L + ++ L + +A+ G+ Y L V HHG PS GHYTAD
Sbjct: 709 GRIEKIRKWIRYDQELTIPKEALSSVNAKFYLSGKDTTYRLTGVVYHHGLSPSGGHYTAD 768
Query: 519 ARY-FNDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+ D+W DD +VT I V AY+L Y++
Sbjct: 769 VLHQTQDKWYRIDDNNVTEIRQEDVFKRGDEASDSKTAYILIYQR 813
>gi|159485266|ref|XP_001700667.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272099|gb|EDO97905.1| predicted protein [Chlamydomonas reinhardtii]
Length = 634
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 176/357 (49%), Gaps = 70/357 (19%)
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV---------------------PNSIS-- 299
SSK +++L G+P PSM ++ F P + P+
Sbjct: 280 SSKDAVMALLLGGKPLVPSMLNGIVAAFNPRISIASASSTSSAGAGAGGGGGKPSMAQLL 339
Query: 300 --GRPRQEDA-----------QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-- 344
G R A QEF+ F++D+ H+E++ L+ ++ ++ A A S ++
Sbjct: 340 SKGGGRSAGAVLVEQQEQQDAQEFVHFLVDRAHEEMVALR-KAHGLDEAQHAQGSASDGG 398
Query: 345 ------EDEWETVG-PKNKSAVTRTQSFLP-------SALSDIFGGQLKSVVKAQ----G 386
DEW VG KNK+ VTR Q P SA+S IFGG LKS ++ Q
Sbjct: 399 AQNGDDADEWAQVGRKKNKATVTR-QVGAPAGDASSRSAVSAIFGGLLKSTIRFQPPHGH 457
Query: 387 NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKI 446
K S T+Q F +LHLDI + ++EDALR S PE++E Y+ G + ++ KK V++
Sbjct: 458 YKPSTTIQSFNMLHLDIAGNEISSLEDALRHHSVPESIE-YKPD--GASEMLPVKKDVRL 514
Query: 447 QTLSKILILHLMRFSYGSQ------GSTKLHKSVRFPLQLVLGRDLLV--TPSAEGRKYE 498
L + L+LHL RF+Y + G +KLHK V F L L +L P +Y
Sbjct: 515 YRLPECLVLHLKRFTYSATAGGHGGGYSKLHKMVAFGNSLRLDSKVLADDCPDRSQPEYR 574
Query: 499 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L ATV HHGR + GHYTAD + WL F+DA V + + VL ++ Y+LFY++
Sbjct: 575 LFATVIHHGRSIAGGHYTADVLQPDGVTWLRFNDAVVDVVPEAAVLGERPYLLFYQR 631
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TRDIPKAGYPTLT 247
E +S L PRGL+N+GN CF+NATLQAL++C PF +L L + A PTL
Sbjct: 119 GEQAESQSLLQPRGLVNTGNTCFINATLQALIACRPFASVLSRLPGVVPLLEPAKCPTLY 178
Query: 248 AFVGFVSDF 256
F S+
Sbjct: 179 GLAQFASEM 187
>gi|295659066|ref|XP_002790092.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281994|gb|EEH37560.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 914
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 145/266 (54%), Gaps = 28/266 (10%)
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWE 349
++ R Q+DAQEFL F+++++H+E + ++TS +T S A E + W
Sbjct: 506 MNSRGHQQDAQEFLGFLLEELHEECTQAVKQATSTGPDIPTHVDTDSASAASEPSVEGWL 565
Query: 350 TVGPKNKSAVTRTQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
VG K K ++TR+ + S ++ IFGG+L+S + GNK S T++P+ L LDI S
Sbjct: 566 EVGHKQKPSITRSSGHVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQ 625
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--Q 465
V I DAL+ + PE ++G SS G VTA K V I+TL +LILHL RF Y S +
Sbjct: 626 VTNIIDALKGLTKPETMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTK 683
Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTP------SAEGR-------KYELVATVTHHGRDPSK 512
G+ K+ K V +PL+L + R++ SA+G KY L + HHG++ S
Sbjct: 684 GTQKIWKRVGYPLELEVPREVFPPHRRNNLLSAQGSGGGSGLPKYRLTGVIYHHGKNASG 743
Query: 513 GHYTADA-RYFNDQWLHFDDASVTAI 537
GHYT D R +W+ DD + +
Sbjct: 744 GHYTVDVLRQDGREWVRLDDTVIRRV 769
>gi|361129295|gb|EHL01207.1| putative ubiquitin carboxyl-terminal hydrolase 3 [Glarea lozoyensis
74030]
Length = 608
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 174/375 (46%), Gaps = 61/375 (16%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF L ++ R K+ P + A + F+ ++
Sbjct: 178 LKPRGLVNTGNMCYMNSVLQVLVSCVPFYSFLDQVGKRAAHSFKSDTPLIDAMIMFMREY 237
Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S + K + D G F P V K+ T
Sbjct: 238 PVIDSAVSVEKLRMRLKQGELEDYGEAFIPEFVYDVTKHLT------------------- 278
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTAL-----------VSLAEEDEWETVGPKNKSAV 359
F ++H+E ++ STS + + A A E+ W VG K K++
Sbjct: 279 -RFSAMRLHEECERIMRASTSNSASAIATPKNNPASPTEDAPSANENGWLEVGRKQKAST 337
Query: 360 TRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
T++ +PS +++IFGG+L++ V+ G S T+ F L LDI + V+ I +AL+
Sbjct: 338 TQSSGIIAIPSPITNIFGGKLRTEVRRPGQTDSVTITHFETLQLDIGAPNVNNIVEALKG 397
Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
S E LE +S G K + +L +LILHL RF Y + ++K+ K V
Sbjct: 398 LSRSEILE----TSAGRGA-----KQDFLDSLPSVLILHLKRFQYDEKTNATSKIWKKVG 448
Query: 476 FPLQLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 527
+PL L + +++ T G +Y L A V HHG++ S GHYT D R + +W+
Sbjct: 449 YPLDLEIPKEVF-TRQKRGVYSHGGLPRYRLTAVVYHHGKNASGGHYTVDVRRQDGREWI 507
Query: 528 HFDDASVTAIGTSKV 542
DD V + + V
Sbjct: 508 RIDDTLVRRVRSEDV 522
>gi|367001536|ref|XP_003685503.1| hypothetical protein TPHA_0D04350 [Tetrapisispora phaffii CBS 4417]
gi|357523801|emb|CCE63069.1| hypothetical protein TPHA_0D04350 [Tetrapisispora phaffii CBS 4417]
Length = 854
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 198/454 (43%), Gaps = 106/454 (23%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR-DIPKAGY---PTLTAFVG 251
+K+++PRG+INS N+CF+++ LQ L+SC+PF+ +L + +I K G L A +
Sbjct: 413 IKNIVPRGIINSANICFMSSVLQVLLSCAPFINILNVVSINSNIMKPGVNQTKLLDACIK 472
Query: 252 FVSDFDTPSGGSSKKKN-----------ISVLDIGRPFSPSMFEAVLKNFTP--DVPNSI 298
S FD S + K+K SP F VL + D+
Sbjct: 473 LYSRFDKESFEAEKEKEKDNESSSKKQSSQYNAKATAISPEEFYKVLSTISKFKDL---- 528
Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------- 345
QEDA+EFL+ ++DQ+H+E + + ES + N + S+++E
Sbjct: 529 -KWGHQEDAEEFLTHLLDQLHEEFISV-IESLTNNEVMNLINSISDEELKIFVIKNIAQY 586
Query: 346 ----------------------------DEWETVGPKNKSAVT------RTQSFLPSALS 371
D W V +K RT PS +S
Sbjct: 587 TKAGFNKTPSPQLKALLNKYSSSIESEGDGWHEVSGSSKKGKKTKTAAKRTVEVEPSPIS 646
Query: 372 DIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
++FGGQ +SV+ NK S T+ PF + LDI + TIE A + FS E L ++
Sbjct: 647 NLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDKETDTIESAFKKFSEYE-LLPFKA 705
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------KLHKSV 474
SS GN V AKK I L ++L++ L RFS+ + K+ K +
Sbjct: 706 SS-GND--VEAKKQTFIDRLPQVLLVQLKRFSFVNNEDKDNNMMNYNSINGRIEKIRKKI 762
Query: 475 RFPLQLVLGRDLLV--TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN---DQWLHF 529
+ +LV+ + L + S RKY+L + HHG GHYTAD FN D+W
Sbjct: 763 SYGHELVIPEESLSPHSWSQTNRKYQLTGVIYHHGLSSDGGHYTADV--FNKTADKWYRI 820
Query: 530 DDASVTAIGTSKVLH--------DQAYVLFYKQV 555
DD ++T + VL AY+L Y+++
Sbjct: 821 DDINITELKKDDVLKGGEDGTDTRTAYILMYQKL 854
>gi|348669889|gb|EGZ09711.1| hypothetical protein PHYSODRAFT_564244 [Phytophthora sojae]
Length = 625
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 201/452 (44%), Gaps = 94/452 (20%)
Query: 181 SKEVPMK-AINEPVKSV------KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL 233
+K +P + AI E +K + K++ RGL+N GN CF N +Q++++C PF+ LL E+
Sbjct: 97 AKPLPFEEAIQETLKGLDVSAPAKEMKKRGLVNQGNTCFQNVIMQSVLACPPFLNLLAEI 156
Query: 234 RTRDIPK----AGYPTLTAF---VGFVSDFDTPS------GGSSKKKNISVLDIGRPFSP 280
P A T A+ V F +F+ P+ +S ++N + + P +
Sbjct: 157 SAATAPTSEMMASTSTFKAWRHMVAFAREFEEPTLAQLHLQAASGERNPNDMHGKVPQAI 216
Query: 281 SM---FEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK----------LQG 327
+ F VL F R QEDA EFL F ++ +H E K Q
Sbjct: 217 RISGYFMDVLSAFQ-------KMRGEQEDALEFLEFFLEYLHSEYEKSGLELPASCEEQT 269
Query: 328 ESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSF--LPSALSDIFGGQLK 379
+ ++ N A+V + A +D W VG K KS+V R + S ++ +F G L+
Sbjct: 270 KRSAAKKQNGAVVDADLENAQAFDDGWAEVGKKGKSSVLRQNPVDTIRSPINWLFKGALR 329
Query: 380 SVVKAQGNKASA-TVQPFLLLHLDIYSEAVH------------------TIEDALRLFSA 420
S +K G + S+ TV+PF LHL++ EA TIE+ +R
Sbjct: 330 SELKQNGKRQSSITVEPFHCLHLNLDYEAQDPSFVTGANGLAKPLSTPITIEEMIRKSFD 389
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQ 479
E +E V T KK +++L +L L + RF+Y QG KL + V++P
Sbjct: 390 VEVIEDVNQ-------VPTMKKFTTVESLPVVLTLSVKRFTYHPEQGPVKLQQFVKYPPS 442
Query: 480 LVL-------------GRDLLVTPSAEGR------KYELVATVTHHGRDPSKGHYTADAR 520
L G D+ S G YEL A V+H G+ GHYT R
Sbjct: 443 LEFPTQFMSTTCRAENGMDIPGVASISGAGFSTPPMYELFAVVSHLGKFVVGGHYTCVCR 502
Query: 521 YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
DQW +DD VT+I + L + AY+LFY
Sbjct: 503 DNKDQWFRYDDEHVTSISEATALSETAYLLFY 534
>gi|409081963|gb|EKM82321.1| hypothetical protein AGABI1DRAFT_124803 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 753
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 33/283 (11%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQ-------GESTSINGANTALVSLAEE------DEWE 349
+QEDA+EFL F +D + +ELL +Q +++ V EE D W
Sbjct: 472 QQEDAEEFLGFYLDTLEEELLSIQHSLAPPPQKTSKQQQHQPHPVEEKEELEPPVGDGWL 531
Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
VG KN+ +TRT S ++ +FGG+ KS +KA G K S V+ + L LD+ +++H
Sbjct: 532 EVGKKNRMIITRTIKAAESPITRMFGGKFKSTLKAPGQKDSVLVEDWRSLRLDVQPDSIH 591
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GS 467
TI++AL + P++++ S G + A + V ++ L +L+LH+ RF Y G
Sbjct: 592 TIQEALTQITHPQSIQMTHPSQPGI--TIDANQKVLVEALPPVLVLHVKRFWYDVTVGGV 649
Query: 468 TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA----RY-- 521
K+ K VRF +L +G D++V P KY L + HHG S GHYT D RY
Sbjct: 650 VKVMKQVRFEPELEIGSDMMV-PGKRSTKYRLFGAIYHHGHSASGGHYTLDILHQNRYPG 708
Query: 522 --FNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 555
+ W+ DD V+ + + V + AY+LFY+++
Sbjct: 709 AKLREGWIRIDDELVSDVRSEDVFNAWDKDEMRNAYLLFYRRI 751
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL 233
RGLINSGN+CF NA LQ L+ C+PF +L EL
Sbjct: 288 RGLINSGNMCFANAVLQVLVYCAPFRRLFIEL 319
>gi|256272053|gb|EEU07065.1| Ubp3p [Saccharomyces cerevisiae JAY291]
Length = 912
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 201/465 (43%), Gaps = 112/465 (24%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFV 250
+V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 453 AVHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACL 512
Query: 251 GFVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSI 298
FD + +KK + D + S F+ A PD ++
Sbjct: 513 TMYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTL 569
Query: 299 SGRPR--------QEDAQEFLSFIMDQMHDEL---------------------------- 322
S P+ QEDA+EFL+ ++DQ+H+EL
Sbjct: 570 STIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFF 629
Query: 323 ---LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRT 362
L G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 630 IRNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRT 689
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS
Sbjct: 690 VEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSE 749
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------ 468
E L SS+GN V AKK I L ++L++ RFS+ + +
Sbjct: 750 YELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNG 805
Query: 469 ---KLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTAD 518
K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD
Sbjct: 806 RIEKIRKKIKYDHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTAD 865
Query: 519 ARYF-NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+ +++W DD ++T + VL AY+L Y++
Sbjct: 866 VYHREHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|150865443|ref|XP_001384663.2| hypothetical protein PICST_59800 [Scheffersomyces stipitis CBS
6054]
gi|149386699|gb|ABN66634.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 489
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 190/410 (46%), Gaps = 74/410 (18%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI----PKAGYPTLTAFVGFVSDF 256
PRGL N+GN+C++N+ LQ L+ C PF +LL+ + + I + P L A + F +DF
Sbjct: 96 PRGLTNTGNICYMNSILQMLLYCVPFNRLLKLIEDKSIGTLNRASPTPLLDATIKFFNDF 155
Query: 257 -DTPSGGSSKKKNISVLDIGRPFSPSMFEAVL---KNFTPDVPNSISGRPRQEDAQEFLS 312
D SG SS+ ++ S SP F L + F S +QEDA+EFL
Sbjct: 156 SDKTSGLSSEVEDAS----ESAISPETFYMTLISHEKF------SHLKWGQQEDAEEFLG 205
Query: 313 FIMDQMHDELL----KLQGEST-------SINGANTALVSLAEEDEWET----------- 350
+ +D +H+E L KL S S N VS+ + + T
Sbjct: 206 YYLDGLHEEFLSEIRKLNTPSVDSLIQTFSNENENVEKVSMFKFNIKNTVKLIKNENKNN 265
Query: 351 ------VGPKNKS-AVTRTQSFLPSALSDIFGGQLKSV-VKAQGN-----KASATVQPFL 397
VG NK +V RT PS ++ IFGG KSV + + N + S T+ PF
Sbjct: 266 DNEWNEVGSNNKKISVKRTVEIEPSPINMIFGGSFKSVLIVPKANNPNQFQKSITLDPFQ 325
Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
L LDI SEA TIEDA F LE + S N V KK I L ++LI+HL
Sbjct: 326 NLQLDI-SEA-DTIEDA---FLNMNKLE--KISYKNNDKEVQLKKQTFIDRLPEVLIIHL 378
Query: 458 MRFSY---GSQGSTKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPS 511
RFSY G KL K V + L + ++L S ++L+ V HHG
Sbjct: 379 KRFSYLKDKEVGIEKLRKKVDYAHDLHVPSEVLSNKNIISNAATSFKLIGVVYHHGSSAE 438
Query: 512 KGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQ 554
GHYT+D+ ND WL DD ++ I +VL+ AY+L Y++
Sbjct: 439 GGHYTSDSNVAND-WLRIDDTTLKPISVDEVLNGGTEESIKNAYILLYER 487
>gi|398364935|ref|NP_011078.3| Ubp3p [Saccharomyces cerevisiae S288c]
gi|401244|sp|Q01477.1|UBP3_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|173130|gb|AAA35191.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae]
gi|603391|gb|AAB64678.1| Ubp3p: ubiquitin-specific protease [Saccharomyces cerevisiae]
gi|285811784|tpg|DAA07812.1| TPA: Ubp3p [Saccharomyces cerevisiae S288c]
Length = 912
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 200/464 (43%), Gaps = 112/464 (24%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
FD + +KK + D + S F+ A PD ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570
Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
P+ QEDA+EFL+ ++DQ+H+EL
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630
Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
L G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 468
E L SS+GN V AKK I L ++L++ RFS+ + +
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGR 806
Query: 469 --KLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADA 519
K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD
Sbjct: 807 IEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADV 866
Query: 520 RYF-NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+ +++W DD ++T + VL AY+L Y++
Sbjct: 867 YHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|151944869|gb|EDN63128.1| ubiquitin-specific protease [Saccharomyces cerevisiae YJM789]
gi|190405710|gb|EDV08977.1| ubiquitin carboxyl-terminal hydrolase 3 [Saccharomyces cerevisiae
RM11-1a]
Length = 912
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 200/464 (43%), Gaps = 112/464 (24%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
FD + +KK + D + S F+ A PD ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570
Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
P+ QEDA+EFL+ ++DQ+H+EL
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630
Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
L G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 468
E L SS+GN V AKK I L ++L++ RFS+ + +
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGR 806
Query: 469 --KLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADA 519
K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD
Sbjct: 807 IEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADV 866
Query: 520 RYF-NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+ +++W DD ++T + VL AY+L Y++
Sbjct: 867 YHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|349577813|dbj|GAA22981.1| K7_Ubp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 912
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 198/461 (42%), Gaps = 106/461 (22%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 252 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 302
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 303 R--------QEDAQEFLSFIMDQMHDEL-------------------------------L 323
+ QEDA+EFL+ ++DQ+H+EL L
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 324 KLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 366
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 634 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 693
Query: 367 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 469
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 PF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 470 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 522
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYDHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 523 -NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|149235975|ref|XP_001523865.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452241|gb|EDK46497.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 942
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 191/412 (46%), Gaps = 78/412 (18%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVS 254
D+ P+GL N+GN+CF+N+ LQ L+ C PF +LL+ + T+ I + + P L A + +
Sbjct: 555 DVKPKGLTNTGNICFMNSILQILLYCQPFNRLLKLIETKSISELVNSSLPLLDATIKLFN 614
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
DF P S +I+ P P + A+ K+ S +QEDA+EFL +
Sbjct: 615 DFK-PVHSDSSNGSINNGKAAVPIEP-FYHALSKH----SKFSHLRWGQQEDAEEFLGYY 668
Query: 315 MDQMHDELLKLQGESTSINGANTALVSL-------------------------------- 342
+D +++E L T++ NT+ V
Sbjct: 669 LDALNEEFL------TALRRLNTSQVDTLIQSYSQEDSHELTKFKYNVKTCIRRIKKEND 722
Query: 343 -AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV---KAQGNKASATVQPFLL 398
+EDEW VG K VT+ + P+ L+ IFGG+ KS++ K + S T+ PF
Sbjct: 723 GEDEDEWNQVGAKKN--VTKVE-VEPTPLNMIFGGEFKSIITIPKGSSFQKSITIDPFQQ 779
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
L LDI +I+DA + E++ + + N + KK + L ++LI+HL
Sbjct: 780 LQLDI--SQSDSIDDAFLHLNEVESI----SYMSNNNSELQVKKQTFVSKLPEVLIIHLK 833
Query: 459 RFSYGSQGST---KLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATVTHHGRDPS 511
RFSY KL K V + +L + +L SAE + Y+L + V HHG +
Sbjct: 834 RFSYLKDQEVAIEKLKKLVAYNHKLSVPSQIL---SAEAQASVSTYQLSSVVYHHGANAD 890
Query: 512 KGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHD-------QAYVLFYKQV 555
GHYT+D Y QW DD V +I ++VL+ AY+L Y+++
Sbjct: 891 TGHYTSDIYDYELKQWWRIDDTIVNSIKANEVLNSGNDENSKNAYILVYEKI 942
>gi|326472284|gb|EGD96293.1| ubiquitin C-terminal hydrolase [Trichophyton tonsurans CBS 112818]
Length = 879
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 143/263 (54%), Gaps = 23/263 (8%)
Query: 301 RPRQEDAQEFLSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVG 352
R Q+DAQEFL F+++++HDE L + +S ++ S+A++ D W VG
Sbjct: 500 RGHQQDAQEFLGFLLEELHDECLLATKNAMADKSDVSTSSDMDAHSIADDSTGDGWLEVG 559
Query: 353 PKNKSAVTRTQ--SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
K K++VTR+ S S ++ IF G+++S + GNK S T++P+ L LDI S V+
Sbjct: 560 HKQKASVTRSSGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNN 619
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGST 468
I DAL+ + PE + G SS G V A K V I+ L +LILHL RF Y + G+
Sbjct: 620 IIDALKGLTKPETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQ 677
Query: 469 KLHKSVRFPLQLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR 520
K+ K + +PL+L + R+ L + KY L+ + HHG+ S GHYT + R
Sbjct: 678 KIWKKIGYPLELEIPKEVFPPHRRNALSVQNGSLPKYRLIGVIYHHGKSASGGHYTVEVR 737
Query: 521 YFN-DQWLHFDDASVTAIGTSKV 542
+ +W+ FDD + + + +V
Sbjct: 738 RQDGREWVRFDDTYIRRVRSEEV 760
>gi|444315796|ref|XP_004178555.1| hypothetical protein TBLA_0B01930 [Tetrapisispora blattae CBS 6284]
gi|387511595|emb|CCH59036.1| hypothetical protein TBLA_0B01930 [Tetrapisispora blattae CBS 6284]
Length = 1019
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 197/466 (42%), Gaps = 115/466 (24%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVG 251
+K ++PRG+IN+ N+CF+++ LQ L+ C PF+ +L + R+ + + + A V
Sbjct: 563 IKSIVPRGIINNANICFMSSVLQVLLYCKPFIDILNVISLRNTNSKSNASSFKLIDACVE 622
Query: 252 FVSDFDTPS----------------GGSSKKKNISVLDIGR------PFSPSMFEAVLKN 289
F FD + GS+ K+ + P +P F + L
Sbjct: 623 FYKQFDEETVAKEKLDAINKTTLQDAGSNNKQKAHSASVNNNNGNPSPLNPEQFYSALST 682
Query: 290 FTP--DVPNSISGRPRQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTA 338
D+ G QEDA+EFL+ ++DQ+H+E + ++Q S+N +
Sbjct: 683 IYKFKDL-----GWGHQEDAEEFLTHMLDQLHEEFIAGIYFLTDNEIQNLLQSVNDPDLK 737
Query: 339 LV-----------------------------SLAEEDE-----WETVGPK------NKSA 358
+ S+ + +E W V +SA
Sbjct: 738 IYFIRCLSQYKKAEFMKNISSSLKELISKYGSINDTNEDGSNGWHEVSSSSKKGKKTRSA 797
Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALR 416
RT S +S +FGGQ +SV+ NK S T+ PF + LDI AV+ ++ A +
Sbjct: 798 AKRTFEIESSPISCLFGGQFRSVLDVPSNKESQSITLDPFQTIQLDISDPAVNDLDSAFK 857
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-------- 468
FS E + +++SS + V AKK I L +L++HL RFS+ +
Sbjct: 858 KFSEFEFIP-FKSSSGAD---VEAKKQTFIDKLPTVLLIHLKRFSFINNTDKDNSMANYN 913
Query: 469 -------KLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTAD 518
K+ K + + +LV+ + + + E R YEL V HHG GHYTAD
Sbjct: 914 AYHGRIEKIRKKISYNHELVIPAETITNGKQLAPENRTYELTGVVYHHGLSSDGGHYTAD 973
Query: 519 ARYFN-DQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQV 555
+ D+W DD +VT + VL AY+L Y+++
Sbjct: 974 IYHKEVDKWYRIDDVTVTELEKDDVLKGGENSTDSRTAYILMYQKL 1019
>gi|207345812|gb|EDZ72512.1| YER151Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 912
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 199/464 (42%), Gaps = 112/464 (24%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
FD +KK + D + S F+ A PD ++S
Sbjct: 514 MYKQFDKEI---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570
Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
P+ QEDA+EFL+ ++DQ+H+EL
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630
Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
L G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 468
E L SS+GN V AKK I L ++L++ RFS+ + +
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGR 806
Query: 469 --KLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADA 519
K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD
Sbjct: 807 IEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADV 866
Query: 520 RYF-NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+ +++W DD ++T + VL AY+L Y++
Sbjct: 867 YHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|146420045|ref|XP_001485981.1| hypothetical protein PGUG_01652 [Meyerozyma guilliermondii ATCC
6260]
Length = 726
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 182/409 (44%), Gaps = 83/409 (20%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDT 258
+GL N+GN+C++NA LQ L+ C PF ++L+ + T+ + K+ P L A + F D
Sbjct: 343 KGLTNTGNICYMNAVLQVLLYCEPFNRMLKAIETKTAASLGKSDTPLLDATIKFFEDMSE 402
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P + + SP F ++ D + + +QEDA+EFL+ +D +
Sbjct: 403 P--------------LKKALSPDDF--YMRLIAHDKFSHLKWG-QQEDAEEFLNLFLDGL 445
Query: 319 HDE---------------LLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKSA 358
+E +L+ G+ T A+ + ++ + W V K++
Sbjct: 446 REEFIAVVRGLTPEQVNRVLEHGGDETYRQNVKAAVNMIQKKKDDNDEGWNEVAGTKKAS 505
Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQGNK--ASATVQPFLLLHLDIYSEAVHTIEDALR 416
RT PS +S IFGGQ +SV++ +K S T+ PFL + LDI +++ TIEDA
Sbjct: 506 AKRTVQVEPSPISMIFGGQFRSVLQVPKSKEAQSITLDPFLCVPLDISDDSITTIEDAFV 565
Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY----GSQGSTKLHK 472
F E L ++ V AKK I L IL++ L RF Y + G KL K
Sbjct: 566 RFGETEEL-AFKE--------VVAKKQTFIDQLPPILLIQLKRFLYQLGENAGGIEKLKK 616
Query: 473 SVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADA------- 519
V + L L + L +P+ A + Y L+A V HHG GHYT D
Sbjct: 617 KVAYSHTLTLPNECL-SPALRKHAGAGSKTYRLLAVVYHHGVGAEGGHYTCDVLRKLSLY 675
Query: 520 --------RYFNDQWLHFDDASVTAIGTSKVLH------DQAYVLFYKQ 554
+ + +W+ DD + + +VL AY+L Y++
Sbjct: 676 DHEHESEGKMVDAEWIRIDDTHIEVVERDEVLEGSEDSTKNAYILMYQR 724
>gi|190345632|gb|EDK37554.2| hypothetical protein PGUG_01652 [Meyerozyma guilliermondii ATCC
6260]
Length = 726
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 181/410 (44%), Gaps = 85/410 (20%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDT 258
+GL N+GN+C++NA LQ L+ C PF ++L+ + T+ + K+ P L A + F D
Sbjct: 343 KGLTNTGNICYMNAVLQVLLYCEPFNRMLKAIETKTAASLGKSDTPLLDATIKFFEDMSE 402
Query: 259 PSGGSSKKKNISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
PS KK +S D R + F + +QEDA+EFL+ +D
Sbjct: 403 PS-----KKALSPDDFYMRLIAHDKFSHLKWG-------------QQEDAEEFLNLFLDG 444
Query: 318 MHDE---------------LLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKS 357
+ +E +L+ G+ T A+ + ++ + W V K+
Sbjct: 445 LREEFIAVVRGLTPEQVNRVLEHGGDETYRQNVKAAVNMIQKKKDDNDEGWNEVAGTKKA 504
Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDAL 415
+ RT PS +S IFGGQ +SV++ +K S T+ PF + LDI +++ TIEDA
Sbjct: 505 SAKRTVQVEPSPISMIFGGQFRSVLQVPKSKEAQSITLDPFSCVPLDISDDSITTIEDAF 564
Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY----GSQGSTKLH 471
F E L ++ V AKK I L IL++ L RFSY + G KL
Sbjct: 565 VRFGETEEL-AFKE--------VVAKKQTFIDQLPPILLIQLKRFSYQLGENAGGIEKLK 615
Query: 472 KSVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADA------ 519
K V + L L + L +P+ A + Y L A V HHG GHYT D
Sbjct: 616 KKVAYSHTLTLPNECL-SPALRKHAGAGSKTYRLSAVVYHHGVGAEGGHYTCDVLRKSSL 674
Query: 520 ---------RYFNDQWLHFDDASVTAIGTSKVLH------DQAYVLFYKQ 554
+ + +W+ DD + + +VL AY+L Y++
Sbjct: 675 YDHEHESEGKMVDAEWIRIDDTHIEVVERDEVLEGSEDSTKNAYILMYQR 724
>gi|344230727|gb|EGV62612.1| hypothetical protein CANTEDRAFT_115137 [Candida tenuis ATCC 10573]
Length = 428
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 181/421 (42%), Gaps = 102/421 (24%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
RGL NSGN+C++N+ LQ L+ C PF ++L++ T + ++ P + A + DF T
Sbjct: 43 RGLTNSGNICYMNSILQVLIYCEPFNKLFRILEQKSTGSLNESKTPLIDAIISIFRDFST 102
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--------QEDAQEF 310
SG S SP F L SG + QEDA+EF
Sbjct: 103 -SGTKS-------------LSPEGFYMKL-----------SGHRKFQHLKWGQQEDAEEF 137
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------------------- 345
L +++D +H+EL+ SI N +SL E
Sbjct: 138 LGYLLDGLHEELVH------SIREVNNEQISLLLETVADNETKLQIKNAIKIIKKLNNSS 191
Query: 346 ---------------DEWETVGPKNKSAVT-RTQSFLPSALSDIFGGQLKSVVKAQGNK- 388
+ W +G +K + RT PS + IFGGQ +SV++ K
Sbjct: 192 NGGNDNDNSNDDDDNEGWNEIGGGHKKVSSKRTVEIEPSPIKTIFGGQFRSVLQIPNKKD 251
Query: 389 ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQT 448
S T+ PF + LDI ++ ++ IEDA + + PE + + V AKK I +
Sbjct: 252 QSITLDPFQCIQLDIKADQINNIEDAFKQLNEPEQI----PFKLNDNKEVLAKKQTFIDS 307
Query: 449 LSKILILHLMRFSYGSQGS---TKLHKSVRFPLQLVLGRDLLVT-PSAEGRKYELVATVT 504
L +L++HL RFS+ + + KL K + + +L + +L + R Y+L V
Sbjct: 308 LPDVLVIHLKRFSFENVNNGNIEKLRKKIEYTHKLSIPLELFSNWRKSVNRDYKLTGVVY 367
Query: 505 HHGRDPSKGHYTADARY-----FNDQWLHFDDASVTAIGTSKVLHD-----QAYVLFYKQ 554
HHG GHYT D + +W+ DD S+ I VL + AY+LFY++
Sbjct: 368 HHGIIAEGGHYTCDVLRPMTVSDSSRWIRIDDTSINNIDEDDVLSNDDDTKNAYLLFYQK 427
Query: 555 V 555
+
Sbjct: 428 L 428
>gi|320168898|gb|EFW45797.1| hypothetical protein CAOG_03781 [Capsaspora owczarzaki ATCC 30864]
Length = 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 171/334 (51%), Gaps = 37/334 (11%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRDIPKAGYPTLTAFVGFVS 254
++ PRGL+N GN C++N LQ L++ P LL ELR+ + + Y A
Sbjct: 95 REFQPRGLVNKGNACYINTVLQVLLATPPVHALLHHAELRSFLLQQNAYDEYLA-----R 149
Query: 255 DFDTPSGGSSKKKNISVLDIGR-----------------PFSPSMFEAVLKNFTPDVPNS 297
+P+ + + + + + R PF + + + + +S
Sbjct: 150 TMRSPAAVTDRVSRLLLFSLARLSHEFKILTPQAALKEGPFGQPLLPGYVHDAVVHLRSS 209
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELL----KLQGESTSINGANTALVSLAEEDEWETVGP 353
S + RQEDA+EFL F++D++H+EL+ K S+S + + A+ S A E EWE VG
Sbjct: 210 DSFQFRQEDAEEFLGFVLDRLHNELVGEMRKSAHFSSSYDVSAAAITSGAAE-EWEEVGK 268
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
KNK+AVTR S +S IF G L+S VK +G KAS T+QPF L L+I +V+++ D
Sbjct: 269 KNKTAVTRRLDQEASPISQIFRGFLRSSVKQRGVKASDTLQPFYTLPLEITHHSVNSVVD 328
Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHK 472
ALR+ PE++ G+ + + +A A K + ++ L IL+L L RF Y G K K
Sbjct: 329 ALRVHVLPESISGF--ARSKDALDNEASKQLLLEELPPILVLQLKRFVYDLYGGVQKSLK 386
Query: 473 SVRFPLQLVLGRDLLVTPS-----AEGRKYELVA 501
V +P L L +L P+ + R+Y L+A
Sbjct: 387 FVEYPATLDLSTELFSLPARSKYGPKQRQYRLLA 420
>gi|301113318|ref|XP_002998429.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262111730|gb|EEY69782.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 620
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 188/430 (43%), Gaps = 76/430 (17%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA------- 241
++ P K +K RGL+N GN CF N +Q++++C PF+ LL E+ + P A
Sbjct: 119 VSSPAKEMKK---RGLVNQGNTCFQNVIMQSVLACPPFLNLLAEISSTSPPTAEMLASTS 175
Query: 242 GYPTLTAFVGFVSDFDTPS------GGSSKKKNISVLDIGRPFSPSM---FEAVLKNFTP 292
+ V F +F+ P+ ++ ++N++ + P + + F VL F
Sbjct: 176 TFKAWRHMVAFTREFEEPTLAQLQLQAANGERNLNDMHGKTPQAIRISGYFMDVLSAFQ- 234
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLK----------LQGESTSINGANTALVSL 342
R QEDA EFL F ++ +H E K Q + A A +
Sbjct: 235 ------KMRGEQEDALEFLEFFLEYLHTEYEKSGLELPSSCEKQTKRRPSTAAKPAEADV 288
Query: 343 AEE------DEWETVGPKNKSAVTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASA-TV 393
A E D W VG K KS+V R + S ++ +F G L+S +K G + S+ TV
Sbjct: 289 AFENAQAFDDGWAEVGKKGKSSVLRQNPVDTIRSPINWLFKGALRSELKQNGKRQSSITV 348
Query: 394 QPFLLLHLDIYSEA-----VHTIEDALRLFSAPENLE-----GYRTSSTGNAGVV-TAKK 442
+PF LHL++ E V + + SAP ++ + +A + T KK
Sbjct: 349 EPFHCLHLNLDYETQDPSFVTGVYGLAKPLSAPITIQDMIRKSFDVEVIEDANQIPTMKK 408
Query: 443 SVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDLLVT----------PS 491
+++L +L L + RF+Y QG KL + V++P L + T P
Sbjct: 409 FTTVESLPVVLTLSVKRFTYHPEQGPVKLQQFVKYPPFLEFPTQFMSTTCRAENGMDVPG 468
Query: 492 AEG---------RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
A YEL A V+H G+ GHYT R DQW +DD VT+I +
Sbjct: 469 AAAISGAGFSTPPMYELFAVVSHLGKFVIGGHYTCVCRDNKDQWFRYDDEHVTSISEATA 528
Query: 543 LHDQAYVLFY 552
L + AY+L Y
Sbjct: 529 LSETAYLLLY 538
>gi|296810276|ref|XP_002845476.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
gi|238842864|gb|EEQ32526.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
Length = 863
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 181/361 (50%), Gaps = 47/361 (13%)
Query: 205 INSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSS 264
++ GN+C++N+ LQ L+ C PF + L ++ R A F SD S
Sbjct: 412 LSRGNMCYMNSILQVLIFCVPFYEFLDQIGRR-----------AAHSFKSD--------S 452
Query: 265 KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK 324
+ V+D S E + + R Q+DAQEFL F+++++H+E L
Sbjct: 453 PLVDAMVIDAA-----SSVEKLRLRLKQNELEEDMRRGHQQDAQEFLGFLLEELHEECLH 507
Query: 325 -----LQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRTQS--FLPSALSDIF 374
+ +S + ++ S+ +E D W VG K K++VTR+ S ++ IF
Sbjct: 508 ATKNAIADKSDASTSSDVDAHSIGDESTGDGWLEVGHKQKASVTRSSGDGSGESPITRIF 567
Query: 375 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
G+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE + G SS G
Sbjct: 568 SGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPETMHGDFQSSRGP 627
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLLV---- 488
V A K V I+ L +L+LHL RF Y + G+ K+ K + +PL+L + +++
Sbjct: 628 K--VNATKQVFIEHLPPVLVLHLKRFQYDNVTNGTQKIWKKIGYPLELEIPKEVFPPHRR 685
Query: 489 -TPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL 543
T SA+ KY L+ + HHG+ S GHYT + R + +W+ FDD + + + +V
Sbjct: 686 NTLSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRFDDTYIRRVRSEEVA 745
Query: 544 H 544
+
Sbjct: 746 Y 746
>gi|427794549|gb|JAA62726.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
[Rhipicephalus pulchellus]
Length = 741
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 165/338 (48%), Gaps = 33/338 (9%)
Query: 114 IKNSTNGPALSNG---VNHLKADGIDFSSFHQNAGGHANPS-PISKFHVLCDGNIDGRDQ 169
++ S P + NG AD S G P P S+ DG D
Sbjct: 363 VEESAAAPPVVNGSGSATRCWADLFKKGSSEAEGGNKRQPVVPFSR-----DGVTSDCDD 417
Query: 170 NAAACNSSISGSKEVPM-KAINE-PVKSVKDLL-PRGLINSGNLCFLNATLQALMSCSPF 226
C S+ S + + +A+++ V L+ PRGL N N C++NA LQAL++C F
Sbjct: 418 EVRPCRPSVPESVDTRLGRALHKFTVNHTPPLIQPRGLENGKNWCYINANLQALLACPAF 477
Query: 227 VQLLQELR-TRDIPKA-GYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE 284
LL L +P + P + + F+ + P + KK+ L + + + P F
Sbjct: 478 YNLLYSLPLVPGLPGSNATPFMECLIYFLQTYAVPMVRETGKKD--ELVVAKAYDPEHFR 535
Query: 285 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSING--------- 334
+L PD + +QEDA+EFLSF+++ +HDE++ ++ S +NG
Sbjct: 536 DLLMKIKPDC-----KKGKQEDAEEFLSFMLNGLHDEMVSSMRSVSNGLNGQCNGEAQPP 590
Query: 335 ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQ 394
A +E W+TV +N+ VTR+ +LPS L DIFGG+++S V A G + SA++Q
Sbjct: 591 VEHADDDDDDEGAWKTVIHRNRHQVTRSAEYLPSPLMDIFGGEMRSSVTADG-ETSASLQ 649
Query: 395 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
PF L LDI + V T+EDAL +A E ++ Y +S +
Sbjct: 650 PFFTLQLDI-QDGVKTVEDALLHLAAEEKVQNYHSSKS 686
>gi|385302493|gb|EIF46622.1| ubiquitin-specific protease [Dekkera bruxellensis AWRI1499]
Length = 714
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 179/443 (40%), Gaps = 101/443 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSDFD 257
P GLIN+ ++C++N+ LQ L C PF Q+L +R + G P + A + + D
Sbjct: 285 PHGLINTSSICYMNSVLQMLFECEPFSQVLNIIRBSTMGSIGESKMPLVDALL-MLQDLF 343
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+K +V+ P F +K N G RQEDA+EFL +++D
Sbjct: 344 KKKRIPAKSITSTVIPRRXSIDPMPFYTAIKKLD-RFSNLEWG--RQEDAEEFLGYLLDG 400
Query: 318 MHDELL-------------------------KLQGESTSI-----NGANTALVSLAEEDE 347
+H+E + K++ TSI G T + E
Sbjct: 401 LHEEFITSIEDMPLSAAQXFENGLTDPVAVEKVRYAVTSIKNSKGKGCGTEERQEPDGHE 460
Query: 348 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDIYSE 406
W V K +V R+ F PS ++ +FGGQ +SV++ + K+S T+ PF+ + LDI
Sbjct: 461 WNEVSANRKISVKRSFEFKPSPIALLFGGQFRSVLQPSNTKKSSVTLDPFMHIQLDISDA 520
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---- 462
T+E A FS E + + GN +A+K I L ILI+HL RFS+
Sbjct: 521 TTSTLEGAFEKFSEIEEI------TFGNQ---SARKQNLIDKLPMILIIHLKRFSFVKRD 571
Query: 463 -------------------------------------GSQGST-KLHKSVRFPLQLVLGR 484
S+G K+ K + + +L L
Sbjct: 572 QSENEADAYEIVSSKQKKRKHXKQTKEQELMLSDFKGASEGHIEKISKPIAYKAKLTLPS 631
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 544
+ T Y+LV + HHGR GHYT D W+H DD +T I VL
Sbjct: 632 SCISTSIEGNXTYKLVGVIYHHGRSAEGGHYTVDVLEPTGGWIHIDDTLITHITEGDVLE 691
Query: 545 D------------QAYVLFYKQV 555
+ AY+L Y+++
Sbjct: 692 NGIKGGDLTNNSKSAYLLMYQRL 714
>gi|393245707|gb|EJD53217.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 826
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 196/419 (46%), Gaps = 78/419 (18%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-----------------------RT 235
+ PRGLIN GNLCF NA LQAL+ C+PF +L EL R
Sbjct: 415 IRPRGLINGGNLCFANAILQALVYCTPFHRLFVELGRLSAAAAAAPATQSKLRGAVGARL 474
Query: 236 RDIPKAGYPTLTAFVGFVSDF-DTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLK---N 289
P P + A + F+ +F P+ +S++++ + G F P+ LK
Sbjct: 475 GATPT---PLVDATINFLDEFAPVPAQTASEERDRARSPSGDSDAFIPTYIYDALKEKKR 531
Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI------NGANTALVSLA 343
F +S+ R QEDA+EFL F +D + +ELL L + + G A +
Sbjct: 532 F-----DSMR-RGHQEDAEEFLGFYLDTLEEELLALLADLSPAASGSKQPGPVAAKSEVV 585
Query: 344 EE---------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN-KASATV 393
EE + W VG +N++ V S +S +FGG+ +SV++ G + S V
Sbjct: 586 EESGSELGVNEEGWTEVGRRNRAVVVTNIKTTESPISRVFGGKFRSVLRTPGTGRDSVMV 645
Query: 394 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
Q + L LDI V++I DALR SAPE ++ +S+ A K V++ L +L
Sbjct: 646 QDWNRLQLDIQPPHVNSITDALRNLSAPELVQVGPSST-------EATKQVQLDVLPAVL 698
Query: 454 ILHLMRFSY----GSQGSTKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHG 507
+LHL RF+Y G G K K + F +L G D++ SA +Y+L A V HHG
Sbjct: 699 VLHLKRFAYDPTLGGGGVVKNGKRIAFEPELEFGNDVMAPARRSARPPRYKLYAVVYHHG 758
Query: 508 RDPSKGHYTADAR-----YFNDQWLHFDDASVTAIGTSKVL-HD-----QAYVLFYKQV 555
+ + GHYT D + W+ DD ++ + T V HD AY+LFY+ V
Sbjct: 759 QSATGGHYTLDVLHPAPGHVGTPWVRLDDDIISRVRTEDVFGHDGADDKSAYLLFYRPV 817
>gi|354543189|emb|CCE39907.1| hypothetical protein CPAR2_603260 [Candida parapsilosis]
Length = 907
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 196/408 (48%), Gaps = 74/408 (18%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGF 252
V D+ P+GL N+GN+CF+N+ LQ+L+ C PF +LL+ + T+ D+ ++ P + A +
Sbjct: 525 VFDIKPKGLTNTGNICFMNSILQSLLYCKPFNKLLKLIETKSIGDLVESSQPLIDATIKL 584
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
++F S K +S+ PF ++ + K F + G +QEDA+EFL
Sbjct: 585 FNEF----KPSDNKLPVSI----EPFYSAL--SKHKKFQ----HLKWG--QQEDAEEFLG 628
Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEED-------------------------- 346
+ +D +++E++ L + + + + S ++D
Sbjct: 629 YYLDALNEEMI-LALKKLNTPQVDQLIQSYTQDDVAKFKYNVKTCIRKIKKDDDQEDEEN 687
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV---KAQGN-KASATVQPFLLLHLD 402
EW VGPK +T+ + P+ L+ IF G+ KSV+ K N + S T+ PF + LD
Sbjct: 688 EWNEVGPKKN--ITKIE-VDPTPLNMIFSGEFKSVITIPKPSSNFQKSITLDPFQHVQLD 744
Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
I + ++IE+A + E + Y+ N V KK I+ L ++LI+HL RFSY
Sbjct: 745 ISNS--NSIEEAFLHLNELETI-SYK---GNNNKEVEVKKQTFIERLPQVLIIHLKRFSY 798
Query: 463 GSQGST---KLHKSVRFPLQLVLGRDLL-------VTPSA-EGRKYELVATVTHHGRDPS 511
KL K++ + L + ++L P+ KY+L + V HHG
Sbjct: 799 SKDQENAIEKLAKNISYDHTLTIPNEILSQQQQQQQQPAPLTSFKYQLTSVVYHHGSSAD 858
Query: 512 KGHYTADARYF-NDQWLHFDDASVTAIGTSKVLH---DQAYVLFYKQV 555
GHYT+D F N+QW DD V I +VL + AY+L Y ++
Sbjct: 859 AGHYTSDTFDFENNQWWEIDDTIVKPIKDDEVLSSGINNAYILLYSKI 906
>gi|254578874|ref|XP_002495423.1| ZYRO0B11044p [Zygosaccharomyces rouxii]
gi|238938313|emb|CAR26490.1| ZYRO0B11044p [Zygosaccharomyces rouxii]
Length = 826
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 193/462 (41%), Gaps = 110/462 (23%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----LTAFVG 251
VK + PRG++N N+CF+++ LQ L+ C PF+ +L + R++ P L A +
Sbjct: 373 VKSVAPRGIVNRANVCFMSSVLQVLLYCRPFINILNVVSVRNVVARAGPIQSKLLDACLN 432
Query: 252 FVSDFDTPS--------------------GGSSKKKNISVLDIGRPFSPSMFEAVLKNFT 291
FD + GS ++ N+ V I P F L
Sbjct: 433 IYKQFDKDTVELEKKNAAKNGSGNNSNVGSGSIRQSNV-VSSISEAIKPDEFYEALSTI- 490
Query: 292 PDVPNSISGRPRQEDAQEFLSFIMDQMHDELL---------KLQGESTSIN--------- 333
P + G QEDA+EFL+ ++DQ+H+E + ++ SIN
Sbjct: 491 PKFKDLKWGH--QEDAEEFLTHLLDQLHEEFISSICSLGDNEILNLLQSINDEELRIFFV 548
Query: 334 ----------------GANTALVSL---------AEEDEWETVGPKNKSAVT------RT 362
G L+S E D W V +K RT
Sbjct: 549 RNLPRYKKAEFLKSSPGQLKDLISTYGTVSEDNDEEGDGWHEVSGSSKKGKKTKTAAKRT 608
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
PS +S +FGGQ +SV+ NK S T+ PF + LDI ++V+ +E A + FS
Sbjct: 609 VEMEPSPMSCLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDKSVNDLETAFKKFSE 668
Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------ 468
E L +++SS + V AKK I L ++L++ L RF + +
Sbjct: 669 YE-LLPFKSSSGYD---VEAKKQTFIDRLPQVLLIQLKRFQFINNTDKDNSMVNYNAYNG 724
Query: 469 ---KLHKSVRFPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYF 522
K+ K + + +L++ + + + +A E R+Y L + HHG GHYTAD +
Sbjct: 725 RIEKIRKKINYEHELIIPIESISSANAYKDENRRYHLTGVIYHHGVSSDGGHYTADVYHR 784
Query: 523 -NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQV 555
+D+W DD S+ + VL AY+L Y+++
Sbjct: 785 ESDKWYRIDDVSIIELEKEDVLKGGEESGDSRTAYILMYQKI 826
>gi|392299855|gb|EIW10947.1| Ubp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 912
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 195/461 (42%), Gaps = 106/461 (22%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 252 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 302
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 303 R--------QEDAQEFLSFIMDQMHDEL-------------------------------L 323
+ QEDA+EFL+ ++DQ+H+EL L
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 324 KLQGESTSINGANTALVSL-----------AEEDEWETVGPKNKSAVT------RTQSFL 366
G++ I A+ L L EE+ W V +K RT +
Sbjct: 634 SRYGKAEFIKNASPGLKELIEKYGVINDDSTEENGWHEVSGSSKKGKKTKTAAKRTVEIV 693
Query: 367 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 469
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 PF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 470 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 522
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 523 -NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|325186573|emb|CCA21120.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 565
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 88/438 (20%)
Query: 187 KAINEPVKSVKDLLP------RGLINSGNLCFLNATLQALMSCSPFVQLL-----QELRT 235
+A+ E + S+ P RGL+N GN CF N +Q+LM+CSPF+ L Q
Sbjct: 96 EALQEALASLNITAPGVEVKKRGLVNQGNTCFQNVIMQSLMACSPFLNLFISISRQVASN 155
Query: 236 RDIPKAG--YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD 293
+++ + + V F +F+ PS + + S LD S ++ ++ + +
Sbjct: 156 KELLSSSNTFRAWKYMVAFTREFEEPSLMQLRAIS-SYLDNDERTSKAI---RIRGYFME 211
Query: 294 VPNSIS-GRPRQEDAQEFLSFIMDQMHDEL----LKLQGESTS---INGANTALVSLAEE 345
V +++ R +EDA EFL F +D +H E L+L T + + ++ +
Sbjct: 212 VLSALQKSRGDEEDALEFLEFFLDYLHSEYVTSGLRLPAVCTRNVGMQAKENEVSTIESD 271
Query: 346 DEWETVGPKNKSAVTRTQSFLPSA--LSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLD 402
D W +G K K++ R SF S ++ +F G L+S ++ G K S ++ F LHL+
Sbjct: 272 DGWAEIGKKGKTSTIRQTSFDSSVSPINWLFRGSLRSELQQAGKKQNSINIEAFHCLHLN 331
Query: 403 I----------------------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
+ E+V E L FS E + + G+
Sbjct: 332 LDHQEGAQMAIPGNQHGVGPGASKKESVKLEEMILETFS-----EEFLDDDSNPGGM--- 383
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQLVLGRDLL------------ 487
K+ ++++L +L L++ RF+Y + G KL + V++P + L+
Sbjct: 384 KRLTRMESLPIVLTLNIKRFTYDPKLGPVKLQQFVKYPAKFEFPLHLMSKACRAEHVASI 443
Query: 488 -------------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
+ P YEL A VTHHG+ + GHYT R DQW H+DD V
Sbjct: 444 RGAIDQSTSDYGSIAPPV----YELCAVVTHHGKYVAGGHYTCVCRDNKDQWFHYDDERV 499
Query: 535 TAIGTSKVLHDQAYVLFY 552
+ + + L + AY+LFY
Sbjct: 500 SLVTEACALQENAYLLFY 517
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+++QAL + P + +L ++I L++ V F
Sbjct: 69 GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHIKEINPEN--PLSSQGNIVKSFAQLIR 126
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+K + D + P+ F + + N+ P I QEDA EF++F++D +H++
Sbjct: 127 LLWQKVDQYQYDDMKVLKPTQFISTVGNYNP-----IFAEGTQEDAHEFIAFLLDMIHED 181
Query: 322 LLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L +++ + T + + D EW+ +N+S + D+F GQ+
Sbjct: 182 LNRIKKKPYVEQAKFTKFPTNEDADAEWKKYLSRNQSIIV-----------DLFQGQMLD 230
Query: 381 VVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
+ K+S +PF+ L + + + +++ + F E L+G + N
Sbjct: 231 TLSCLTCKSSRYCFEPFMYLSVPVLNRECE-LQECIEEFLKKETLKGDEGWNCTNCNQRR 289
Query: 440 -AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
+ K + + ++ ILI+HL RF + SQ K+ V++PLQ + +L+ T E Y+
Sbjct: 290 DSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVKYPLQNLSFENLVCTKQVEKPTYD 349
Query: 499 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G S GHYTA + +D W HF+D+ VT + + L+D AY+LFY
Sbjct: 350 LYAVINHSGTLTS-GHYTAYGKNRDDLHWYHFNDSLVTPVQQPESLND-AYLLFY 402
>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
Length = 927
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 167/367 (45%), Gaps = 57/367 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ +Q+L S +P V+ L + DI K + G V++
Sbjct: 586 GLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNF---LGHKGLVAE------ 636
Query: 262 GSSKKKNISVLDIG------RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
+ +V+ G + F P MF+ L + P I G +Q+DAQE L F++
Sbjct: 637 ------HFAVVAKGLWHGGFKNFQPRMFKEALASCNP-----IFGNYKQQDAQELLIFLL 685
Query: 316 DQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
D +H++L K++ E +G LV+ ++ WE NKS +
Sbjct: 686 DGLHEDLNKVKDRRYIEEKDADGRPDQLVA---DESWENHTRLNKSIIV----------- 731
Query: 372 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RT 429
D+F GQ K+ +K K S F+ L L I + T+E L LF E L G R
Sbjct: 732 DLFQGQFKATIKCLSCKFTSVKFDAFMFLSLPIPTSGKATLESCLNLFQQTEKLTGDDRW 791
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVT 489
+ A++++++ + +LI+HL RF + +K+ ++ +P G DL
Sbjct: 792 TCPKCKRARDAERTLRLWRMPTLLIIHLKRFKSDGRWKSKVSTNISYP---TTGFDL--K 846
Query: 490 PSAEGRK----YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
P G+K Y L+A H G GHY A R W+ DDA VTAI SK +
Sbjct: 847 PQTLGKKKQPPYNLIAVTHHIGASTDSGHYVASCRRAKG-WVKADDAEVTAISESKAISP 905
Query: 546 QAYVLFY 552
AY+LFY
Sbjct: 906 TAYILFY 912
>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
Length = 655
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 166/362 (45%), Gaps = 36/362 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPT---LTAFVGFVSDFDT 258
GL N GN CF+N+ +Q L + P ++ + E D+ K+ TA+ +++
Sbjct: 320 GLNNLGNTCFMNSIIQCLSNTHPLLEYCISERYVNDLNKSSTMRGNLFTAYASLMNELWD 379
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S SP F+ ++ F P Q+D+QEFL ++++ +
Sbjct: 380 PEMFESST------------SPMQFKTQIQRFAPRFVGY-----SQQDSQEFLRYVLEGL 422
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + A LA+ D K R S SA+ D+F GQL
Sbjct: 423 HNEVNRVTKRPHPVTPDYAAEDKLADRD-------KADLYWKRYLSMDNSAIVDLFVGQL 475
Query: 379 KSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
S ++ A+ S T PF L L I +A I D LRLF++ E+L+G+ G V
Sbjct: 476 MSTLECAECGFKSTTFDPFWDLSLPIPKKANVNIMDCLRLFTSKEDLDGHERPMCGRCKV 535
Query: 438 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 495
K +Q +IL+LHL RFS G + +K+ V +PL L +PS + R
Sbjct: 536 RRRCTKHFSLQKFPRILVLHLKRFS-GERFRSKMSVLVDYPLN-DLNLSEFASPSCQQRY 593
Query: 496 -KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
+Y L A H G GHYTA R+ + + W ++D+ V T V+ + YVLFY+
Sbjct: 594 ARYNLYAVSNHSG-SVYAGHYTAICRHHYRNSWYDYNDSRVRPTSTQSVVSAEGYVLFYE 652
Query: 554 QV 555
+
Sbjct: 653 LI 654
>gi|351694798|gb|EHA97716.1| Ubiquitin carboxyl-terminal hydrolase 10 [Heterocephalus glaber]
Length = 668
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 177/407 (43%), Gaps = 57/407 (14%)
Query: 164 IDGRDQNAA--ACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALM 221
++ D NAA C + S + IN+P KS L +S + T +L
Sbjct: 301 VESTDSNAAKLECMPPPANSALLAPIPINQPPKSWASLFHDAKPSSSSPVVYVETKCSLP 360
Query: 222 SCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD--------TPSGGSSKKKNISVLD 273
+ SP V Q +P + P + + PS + K + +
Sbjct: 361 ASSPLVSEKQVEVKGLVPVSEDPVPMQIAELLENITLAHKPVSWQPSCQALGDKIMRAIH 420
Query: 274 IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSIN 333
G F P+ +L + +S+S + RQEDA+E+L I++ +H+E+L L+ S N
Sbjct: 421 PGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLDLILNGLHEEMLSLK-RSPLTN 475
Query: 334 GANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV 393
E+EWE VGP+NK +VT F+ ++ IFGG ++SVV Q +K SAT+
Sbjct: 476 NEEQQEQGEGHEEEWEQVGPRNKMSVTHQADFIQIPITSIFGGHIRSVVYQQSSKESATL 535
Query: 394 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
QPF +L LDI S+ + T+EDAL A E+++GY T + V + V ++ L +
Sbjct: 536 QPFFMLQLDIKSDKICTMEDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVF 592
Query: 454 ILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKG 513
+LHL F Y L+A V HH + G
Sbjct: 593 VLHLKCF----------------------------------MTYRLIAVVYHHCNSATGG 618
Query: 514 HYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 555
HYT + + WL ++ V I KVL Y+L+Y+++
Sbjct: 619 HYTTNVFQIGLNSWLCINNQMVKVIQQYKVLKPTDERTTYLLYYRRM 665
>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
magnipapillata]
Length = 995
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 41/363 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++N+ +Q L +C+ +P Y T + ++ +T +
Sbjct: 656 GLKNLGNTCYMNSVIQCL-ACT-------------LPLGKYFTTGMYEKHLNLCNTNAHP 701
Query: 263 SSKKKNISVLDI------GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ ++ L I R SP F+ L F PD SG +Q+DA E L F MD
Sbjct: 702 GELARELAFLIIVISAGEYRSVSPIDFKIALGKFAPD----FSGF-KQQDAHELLMFFMD 756
Query: 317 QMHDELLKL-QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
+H+++ K+ + E + + +A + W+ N S + D+F
Sbjct: 757 GLHEDVNKIVKKEIIKVKETDNLSDEIAADIAWKDYKLNNDSVIV-----------DLFQ 805
Query: 376 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
GQ +S V NK S T F L L + S T+E+ ++ F+ E + G + N
Sbjct: 806 GQFRSTVTCLSCNKRSKTFDAFNCLQLPLPSNQSTTLENCIQTFTKAEKIGGNDSWKCSN 865
Query: 435 AGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
A K+++I L +LI+ L RF + + K+ +V FP+Q +V P +
Sbjct: 866 CKRYREASKTIEIWKLPPVLIIQLKRFHFDGRWHNKIQTTVNFPMQNFNMSKYIVAPQSI 925
Query: 494 GRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY L A + H+G S GHYTA+ + ++W +FDD+ V I + + + AY+LFY
Sbjct: 926 HTKYHLYAVINHYGSFES-GHYTANCVNPYYEKWYNFDDSIVKEIDVNSIKTNTAYLLFY 984
Query: 553 KQV 555
V
Sbjct: 985 TAV 987
>gi|255719840|ref|XP_002556200.1| KLTH0H07370p [Lachancea thermotolerans]
gi|238942166|emb|CAR30338.1| KLTH0H07370p [Lachancea thermotolerans CBS 6340]
Length = 781
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 199/452 (44%), Gaps = 101/452 (22%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVG 251
+++ ++PRG++N+GN+CF+++ LQ L+ C PFV L+ + + K G+ L A +
Sbjct: 340 ALQSVIPRGIVNTGNICFMSSILQVLLFCEPFVNLMNLISVKTSAKMGSTGFLLLDACLE 399
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-------- 303
FD + +++ S G S ++ +A+ + D ++S P+
Sbjct: 400 LYRKFDK---QAFEREKASRSSSGVNISSALADAIKPD---DFYKTLSKLPKFKDLRWGH 453
Query: 304 QEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALV-------------- 340
QEDA+EFL+ ++DQ+H+E + ++ SIN +T V
Sbjct: 454 QEDAEEFLTHLLDQLHEEFVNSIDSLSDSEVISLINSINDEDTKTVFIRNLAKYKDAKFI 513
Query: 341 --------SLAEE-------------DEWETVGPKNKSAVT------RTQSFLPSALSDI 373
S+ E+ + W+ V +K RT PS +S I
Sbjct: 514 KDSSNEIKSMLEKYDADVDDADDTSGNGWQEVSSTSKKGKKTKTAAKRTVVVEPSPISVI 573
Query: 374 FGGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
FGGQ +SV+ NK S T+ PF + LDI V+ ++ A FS E+L ++TSS
Sbjct: 574 FGGQFRSVLDVPQNKEPQSITLDPFQTIQLDISDPDVNDLDSAFLKFSEMEHLP-FKTSS 632
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSY--------------GSQGSTKLHKSVRFP 477
N V AKK I L ++ ++ L RFS+ S K+ K + +
Sbjct: 633 GNN---VEAKKQTFIDKLPEVFLIQLKRFSFINNTDKSKIVNYNAYSGHVEKIRKKIHYG 689
Query: 478 LQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 531
+L + + + + G Y+L+ V HHG PS GHYT D ++W DD
Sbjct: 690 HELAIPDATISSVHSSFYKEAGTNYKLIGVVYHHGVSPSGGHYTCDVYQETLNKWYRIDD 749
Query: 532 ASVTAIGTSKVLH--------DQAYVLFYKQV 555
+V I +VL AY+L Y+++
Sbjct: 750 TNVQEIEKDEVLKGGEEGNDSRTAYILIYQKL 781
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 182/389 (46%), Gaps = 63/389 (16%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQG 466
++ D LR F+ E L+ T +KS K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELD--ETELYMCHKCRKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL 420
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFN 523
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A++
Sbjct: 421 RNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYAKH-E 479
Query: 524 DQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+W HF+D++VT V+ +AY+LFY
Sbjct: 480 GRWFHFNDSTVTLADEDTVVKAKAYILFY 508
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 211
Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRP 302
V V +F +K + L G P FSP S+F V K +PN G
Sbjct: 212 GDNNVSLVEEF---------RKTLCALWQGSPTAFSPESLFYVVWK----IMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAFATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT VL +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVLKAKAYILFY 508
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 179/387 (46%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ P NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSPSNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 122 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 175
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 176 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 226
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + +++ E T+ NK +
Sbjct: 227 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVIL----QENATLSASNKCCINGA 276
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 277 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMC 332
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
T+ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 333 TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 392
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 393 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 451
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 452 WFHFNDSTVTLTDEETVVKAKAYILFY 478
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 169/360 (46%), Gaps = 36/360 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+++QAL + P + +L ++I L++ V F
Sbjct: 50 GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHVKEINPDN--PLSSQGNIVQSFAQLIR 107
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+K + L+ + P+ F + + N+ P I QEDA EF++F++D +H++
Sbjct: 108 LLWQKVDQYTLEEIQALKPTQFISTIGNYNP-----IFAEGTQEDAHEFIAFLLDMIHED 162
Query: 322 LLKLQGESTSINGANTALVSLAEED----EWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
L +++ + T L D EW +N+S + D+F G
Sbjct: 163 LNRIKKKPYV---EQTKFTKLPTNDDAHQEWTKYLSRNQSIIV-----------DLFQGH 208
Query: 378 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTG 433
+ + K+S +PF+ L + + S +E + F E L EG+ + T
Sbjct: 209 MLDTLSCLTCKSSRYCFEPFMYLSVPVLSRECDLLE-CIEEFLKTETLTGDEGW--NCTK 265
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ + K + + ++ ILI+HL RF + SQ K+ VR+PLQ + +L+ T E
Sbjct: 266 CSQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVRYPLQNLSFENLVCTKQIE 325
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y+L A + H G S GHYTA A+ +D QW H++D+ V+ + + D AY+LFY
Sbjct: 326 KPTYDLYAVINHSGTLTS-GHYTAYAKNRDDLQWYHYNDSLVSPVSQPENQSD-AYLLFY 383
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLFASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVVKAKAYILFY 508
>gi|156847299|ref|XP_001646534.1| hypothetical protein Kpol_1055p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156117212|gb|EDO18676.1| hypothetical protein Kpol_1055p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 822
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 193/461 (41%), Gaps = 102/461 (22%)
Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPT 245
NE + + ++PRG++N N+CF+++ LQ L+ C PF+ +L TR+ +
Sbjct: 365 NESILPIGSIIPRGIVNRANICFMSSVLQVLLYCRPFISVLNIASTRNSYSKVNSNSSKL 424
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP--------DVPNS 297
L A V FD + K+ + + ++ E + NF P D
Sbjct: 425 LDACVTIYKQFDKQTYQKEKENDKNKDKKSN--GKAVEEKPMNNFAPASDAINPDDFYKI 482
Query: 298 ISGRPR--------QEDAQEFLSFIMDQMHDEL--------------------------- 322
+S P+ QEDA+EFL+ ++DQ+H+E
Sbjct: 483 LSTLPKFKDLQWGHQEDAEEFLTHLLDQLHEEFICSINSLTDNEILNIVQSISDEELKVF 542
Query: 323 ----LKLQGESTSINGANTALVSLA--------EEDE---WETVGPKNKSAVT------R 361
L ++ + A+ L SL ++DE W V +K R
Sbjct: 543 FVRNLPQYKKADFMKNASYQLKSLISKYGPMSDDDDETNGWHEVSSTSKKGKKTKTAAKR 602
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFS 419
T S +S++FGGQ +SV+ NK S T+ PF + LDI ++ +E A + FS
Sbjct: 603 TVEIEQSPISNLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDSSIDDLETAFKKFS 662
Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST----------- 468
E L +++SS + V AKK I L ++L++ L RFS+ +
Sbjct: 663 EYE-LLPFKSSSGSD---VEAKKQTFIDKLPQVLLVQLKRFSFINNTDKDNNMTNYNAYN 718
Query: 469 ----KLHKSVRFPLQLVLGRDLLVTPS--AEGRKYELVATVTHHGRDPSKGHYTADARYF 522
K+ K +++ +L + + L S + R YEL + HHG GHYTAD +
Sbjct: 719 GRIEKIRKKIKYDHELTIPLESLSPASIDTKNRAYELTGVIYHHGLSSDGGHYTADVYHK 778
Query: 523 N-DQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
D+W DD ++ + VL AY+L Y++
Sbjct: 779 ELDKWYRIDDVNIIELEKDDVLKGGEDGNDTRTAYILIYRK 819
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 124 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 177
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 178 ----YHTRSQG---ENNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 228
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + S+ +E+ T+ NK +
Sbjct: 229 QQQDAHEFMRYLLDHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGA 278
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+
Sbjct: 279 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTC 334
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 335 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 394
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 395 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 453
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT VL +AY+LFY
Sbjct: 454 WFHFNDSTVTLTDEDTVLKAKAYILFY 480
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 262
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 262
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 122 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 175
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 176 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 226
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 227 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 276
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 277 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 332
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 333 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 392
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 393 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 451
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 452 WFHFNDSTVTLTDEETVVKAKAYILFY 478
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 262
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 318
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEDTVVKAKAYILFY 464
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 123 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 176
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 177 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 227
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 228 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 277
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 278 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 333
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 334 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 393
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 394 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 452
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 453 WFHFNDSTVTLTDEETVVKAKAYILFY 479
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKS-VKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L+ IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHRCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 175/379 (46%), Gaps = 59/379 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTP 259
GL N GN CF+NA LQ+L + F +EL R+ AG T + T
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTR 209
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEF 310
S G S N+S+++ R ++++ F+P+ +PN G +Q+DA EF
Sbjct: 210 SQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEF 264
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+ +++D +H L+LQG NG + + S+ +E+ T+ NK + + +
Sbjct: 265 MRYLLDHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGAST----VV 310
Query: 371 SDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRL 417
+ IFGG L++ V S PFL L LDI S+ ++ D LR
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRS 370
Query: 418 FSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
F+ E L E + K IQ L K+L LHL RF + + K+ V F
Sbjct: 371 FTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEF 430
Query: 477 PLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 533
PL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++
Sbjct: 431 PLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDST 489
Query: 534 VTAIGTSKVLHDQAYVLFY 552
VT V+ +AY+LFY
Sbjct: 490 VTLTDEDTVVKAKAYILFY 508
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 175/379 (46%), Gaps = 59/379 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTP 259
GL N GN CF+NA LQ+L + F +EL R+ AG T + T
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTR 165
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEF 310
S G S N+S+++ R ++++ F+P+ +PN G +Q+DA EF
Sbjct: 166 SQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEF 220
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+ +++D +H L+LQG NG + + S+ +E+ T+ NK + + +
Sbjct: 221 MRYLLDHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGAST----VV 266
Query: 371 SDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRL 417
+ IFGG L++ V S PFL L LDI S+ ++ D LR
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRS 326
Query: 418 FSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
F+ E L E + K IQ L K+L LHL RF + + K+ V F
Sbjct: 327 FTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEF 386
Query: 477 PLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 533
PL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++
Sbjct: 387 PLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDST 445
Query: 534 VTAIGTSKVLHDQAYVLFY 552
VT V+ +AY+LFY
Sbjct: 446 VTLTDEDTVVKAKAYILFY 464
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 284
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 284
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 284
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 284
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 67 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 121 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 171
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 221
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 277
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 338 KVDTYVEFPLRGLDMKCYLLEPENSGLESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 396
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 397 WFHFNDSTVTLTDEETVVKAKAYILFY 423
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 176/383 (45%), Gaps = 59/383 (15%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSD 255
L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 276 LCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT---------- 325
Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQED 306
+ T S G + N+S+++ R ++++ F+P+ +PN G +Q+D
Sbjct: 326 YHTRSQGDN---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY-QQQD 380
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EF+ +++D +H L+LQG NG + +++ L E ++ NK +
Sbjct: 381 AHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGA---- 426
Query: 367 PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIED 413
+ ++ IFGG L++ V S PFL L LDI S+ + T+ D
Sbjct: 427 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRD 486
Query: 414 ALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 487 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 546
Query: 473 SVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHF 529
V FPL+ + + L+ P G + Y+LVA V HHG GHYTA A + +W HF
Sbjct: 547 YVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAH-EGRWFHF 605
Query: 530 DDASVTAIGTSKVLHDQAYVLFY 552
+D++VT V +AY+LFY
Sbjct: 606 NDSTVTLTDEETVGKAKAYILFY 628
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGFLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDIYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 63 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 116
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 117 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 167
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 168 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 217
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 218 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 273
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 274 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 333
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 334 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 392
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 393 WFHFNDSTVTLTDEETVVKAKAYILFY 419
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 63 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 116
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 117 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 167
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 168 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 217
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 218 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 273
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 274 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 333
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 334 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 392
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 393 WFHFNDSTVTLTDEETVVKAKAYILFY 419
>gi|347441714|emb|CCD34635.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
Length = 617
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 133/255 (52%), Gaps = 33/255 (12%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P + A + F+ +F
Sbjct: 357 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSQTPLIDAMIMFMREF 416
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 307
S ++ L G E +FTPD + R PR Q+DA
Sbjct: 417 SVIDSAKSVEQLKMRLKDGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 470
Query: 308 QEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE-------------EDEWETVGP 353
+EFL F+++ +HDE + ++ +S N A+T +++ +D W+ VGP
Sbjct: 471 EEFLGFLLEGLHDECVHVMKSSESSKNSADTTPMNVPSSPISDTASRRGSVDDVWQQVGP 530
Query: 354 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
K K+A+TR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI S +H I
Sbjct: 531 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPDIHNI 590
Query: 412 EDALRLFSAPENLEG 426
DALR + E L G
Sbjct: 591 VDALRGLTHSEVLHG 605
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + +++ L E ++ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 172/387 (44%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 154 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 213
Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRP 302
V V +F +K + L G FSP S+F V K +PN G
Sbjct: 214 GDVNVSLVEEF---------RKTLCALWQGNQTAFSPESLFYVVWK----IMPN-FRGY- 258
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQGE +G++ +++S A NK +
Sbjct: 259 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SACNKCCINGA 308
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ + S +FGG L++ V S PFL L LDI S+
Sbjct: 309 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 364
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
T+ D LR F+ E L E + + K IQ L K+L LHL RF + +
Sbjct: 365 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 424
Query: 469 KLHKSVRFPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P E Y+L A V HHG GHYTA A + +
Sbjct: 425 KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-KGR 483
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 484 WFHFNDSTVTLTEEETVAKAKAYILFY 510
>gi|326433796|gb|EGD79366.1| hypothetical protein PTSG_09776 [Salpingoeca sp. ATCC 50818]
Length = 612
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 174/374 (46%), Gaps = 37/374 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT-AFVGFVSDFDTPSG 261
G++N GN C++NA LQ L S P V+ + L +P + TLT A F+ +F + S
Sbjct: 240 GILNEGNTCYMNAPLQLLFSL-PHVRRV--LLGASVPPS---TLTYALQSFLREFISTSR 293
Query: 262 GS--SKKKNI-SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
++++ +L + +P S + AV P+ Q DA+E L+F++ +
Sbjct: 294 LDVLDPRQDVDRILRVAKPLSAA---AVYAGIGSRNPSLFDFSNMQHDAEEVLTFLLSTV 350
Query: 319 HDELLK--------LQGESTSINGAN------TALVSLAEEDEWETVGPKNKSAVTRTQS 364
HDELLK GE + GA A +D WE VGPK SA
Sbjct: 351 HDELLKHCPTFTGLAPGERDASGGARNADDADADAGDDAGDDGWEEVGPKKTSARLNEVK 410
Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
SA+S + G +S + + + S +QPF +L +DI E +E+A+ +PE +
Sbjct: 411 AKLSAVSRVLQGTFRSTIAYKSGQRSIVLQPFFVLQVDIKPE-TKRLEEAIDATFSPETI 469
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
EG + S G VTA+K + ++ +L++ L R+ + Q TKL V F L L +
Sbjct: 470 EGVQRS--GAPAAVTARKQLHLERAPPVLLIQLKRYHFDGQQITKLTNHVDFTETLTLKQ 527
Query: 485 DLL-VTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
L V AE +Y L V H G +GHYT R + WL F+D + I V
Sbjct: 528 SWLSVKAQAEQECEYHLHGVVFHIGSLAVQGHYTCSVRS-SCGWLDFNDKKIKRIDPMFV 586
Query: 543 L----HDQAYVLFY 552
+QAY+L Y
Sbjct: 587 YRPAEREQAYMLAY 600
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 177/389 (45%), Gaps = 59/389 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 81 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 134
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 135 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 185
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 186 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSCSPI-LQENS---TLSASNKCCINGA 235
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 236 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 291
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 292 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 351
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 352 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 410
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
W HF+D++VT V+ +AY+LFY +
Sbjct: 411 WFHFNDSTVTLTEEDTVVKAKAYILFYAE 439
>gi|123479953|ref|XP_001323132.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121905991|gb|EAY10909.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 393
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 177/415 (42%), Gaps = 60/415 (14%)
Query: 162 GNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLL------PRGLINSGNLCFLNA 215
GN++ ++ A+A + + K+ K +++ K + PRGL+N G +CF NA
Sbjct: 15 GNVEFPEEIASAYKTILQDGKDSIEKDFATNLQTGKYFVTPMVVQPRGLMNRGLMCFANA 74
Query: 216 TLQALMSCSPFVQLLQELRTR-----DIPKAGYPTLTAFVGFVSDFDTPSGGSS-----K 265
++Q L + PFV ++T D + P+ TA F+++F SS
Sbjct: 75 SIQLLFASPPFVSFANFMKTYYPLFSDKQREVIPSWTALYKFLNNFKFSDSASSDGVYTS 134
Query: 266 KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 325
K++ ++D + + V F N+ QEDA EFLS+ ++++HDEL L
Sbjct: 135 LKSLDLIDKASATNTDILNEVFGPF-----NAKRKPKTQEDASEFLSYFLNKLHDELCSL 189
Query: 326 QG-----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
ES+ N T +G K + V TQ L S LS IF ++S
Sbjct: 190 IELYPVPESSDPNNRRTV------------IGGKIQQIVD-TQGKL-SPLSKIFATFVRS 235
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
S + L+L L IY + ++ A+R + E + T
Sbjct: 236 ETLDHHKVRSVNAEVTLVLQLPIYE--IKSLGQAIRRYLEVEQITD------------TI 281
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELV 500
K + L LI+ RF + G KL V +P L L D E Y+L
Sbjct: 282 SKRNHLTALPMSLIIGFTRFGFNDYGPMKLTGIVEYPEILRLEAD------DEKFSYQLS 335
Query: 501 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A V H G P GHY AR F+ QWL FDD V+ +G L QAY+L Y ++
Sbjct: 336 AVVEHIGTRPDAGHYVCYARRFDGQWLKFDDDKVSELGDEGHLGLQAYMLLYNRI 390
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 99 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 152
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G N+S+++ R ++++ F+P+ +PN G
Sbjct: 153 ----YHTRSQGDV---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY- 203
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQGE +G++ +++S A NK +
Sbjct: 204 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SASNKCCINGA 253
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ + S +FGG L++ V S PFL L LDI S+
Sbjct: 254 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 309
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
T+ D LR F+ E L E + + K IQ L K+L LHL RF + +
Sbjct: 310 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 369
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 370 KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-KGR 428
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 429 WFHFNDSTVTLTEEETVAKAKAYILFY 455
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 134 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 187
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 188 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 238
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + S+ +E+ T+ NK +
Sbjct: 239 QQQDAHEFMRYLLDHLH---LELQG---GFNGVPRS--SILQEN--STLSANNKCCINGA 288
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 289 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVC 344
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 345 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 404
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 405 KVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 463
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 464 WFHFNDSTVTVTDEETVGKAKAYILFY 490
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 262
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHY A A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYIAYATH-EGR 437
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 173/384 (45%), Gaps = 53/384 (13%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
S L GL N GN CF+NA LQ+L + F +EL P + G +
Sbjct: 343 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKEL----------PAVELRNGKTA 392
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQE 305
T S N+S+++ R ++++ F+P+ +PN G +Q+
Sbjct: 393 GRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQ 450
Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
DA EF+ +++D +H L+LQG NG + +++ L E ++ NK +
Sbjct: 451 DAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGAS-- 498
Query: 366 LPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIE 412
+ ++ IFGG L++ V S PFL L LDI S+ + ++
Sbjct: 499 --TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLCSLR 556
Query: 413 DALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 471
D LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 557 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 616
Query: 472 KSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLH 528
V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +W H
Sbjct: 617 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFH 675
Query: 529 FDDASVTAIGTSKVLHDQAYVLFY 552
F+D++VT V+ +AY+LFY
Sbjct: 676 FNDSTVTLTDEETVVKAKAYILFY 699
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + +++ L E ++ +K +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLTASSKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
T+ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H EL NG + + ++ +E+ T+ NK + +
Sbjct: 213 QQQDAHEFMRYLLDHLHLEL------QDGFNGVSHS--AILQENS--TLSTSNKCCINGS 262
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 67 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 121 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 171
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + S+ +E+ T+ NK +
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVPRS--SILQEN--STLSANNKCCINGA 221
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVC 277
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 338 KVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 396
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 397 WFHFNDSTVTVTDEETVGKAKAYILFY 423
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 173/387 (44%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 154 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 213
Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRP 302
V V +F +K + L G FSP S+F V K +PN G
Sbjct: 214 GDVNVSLVEEF---------RKTLCALWQGNQTAFSPESLFYVVWK----IMPN-FRGY- 258
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQGE +G++ +++S A NK +
Sbjct: 259 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SVSNKCCINGA 308
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ + S +FGG L++ V S PFL L LDI S+
Sbjct: 309 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 364
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
T+ D LR F+ E L E + + K IQ L K+L LHL RF + +
Sbjct: 365 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 424
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 425 KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLEAVVVHHGSGVGSGHYTAYATH-EGR 483
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 484 WFHFNDSTVTLTEEETVAKAKAYILFY 510
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
RQ+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 RQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSANNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 S----TVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V+FPL+ + + L+ P G Y+L A HHG GHYTA A + +
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVFVHHGSGVGSGHYTAYAVH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVGKAKAYILFY 508
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H EL NG + + ++ +E+ T+ NK + +
Sbjct: 257 QQQDAHEFMRYLLDHLHLEL------QDGFNGVSHS--AILQENS--TLSTSNKCCINGS 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 104 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 157
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 158 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 208
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ + NK +
Sbjct: 209 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--ALSASNKCCINGA 258
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 259 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 314
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 315 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 374
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 375 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 433
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 434 WFHFNDSTVTLTDEDTVVKAKAYILFY 460
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 126 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 179
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 180 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 230
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + +++ L E + NK +
Sbjct: 231 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---GLSASNKCCINGA 280
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 281 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPMC 336
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 337 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 396
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 397 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 455
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 456 WFHFNDSTVTLTDEETVVKAKAYILFY 482
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 175/382 (45%), Gaps = 61/382 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTP 259
GL N GN CF+NA LQ+L + F +EL P++ G + + T
Sbjct: 164 GLRNLGNTCFMNAILQSLSNIQVFSCYFKEL----------PSVALRSGKTAGRRMYHTR 213
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFL 311
S G S ++S+++ R S+++ F+PD + S G +Q+DA EFL
Sbjct: 214 SQGDS---SVSLVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGY-QQQDAHEFL 269
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+++D +H E+ QG NG+ + V+ E + ++K + T + + S
Sbjct: 270 RYLLDHLHREM---QGNK---NGSPSPPVTSDEPNH----ASESKCFINGTSTIVTS--- 316
Query: 372 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLF 418
+FGG L++ V S PFL L LDI ++ T+ D LR F
Sbjct: 317 -VFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSF 375
Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
+ E L+ T +KS K IQ L K+L LHL RF + + K+ V
Sbjct: 376 TDLEELD--ETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVE 433
Query: 476 FPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA 532
FP+ + + L+ P E Y+L A V HHG GHYTA R+ QW HF+D+
Sbjct: 434 FPMCGLDMKSYLLEPENSLPERCLYDLAAVVVHHGSGIGSGHYTAYGRH-EGQWYHFNDS 492
Query: 533 SVTAIGTSKVLHDQAYVLFYKQ 554
+VT + VL +AY+LFY +
Sbjct: 493 TVTLVSEEAVLKAKAYILFYTE 514
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 174/388 (44%), Gaps = 61/388 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSK-------KKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGR 301
+ T S G S +K + L G FSP S+F V K +PN G
Sbjct: 206 ----YHTRSQGDSSVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWK----IMPN-FRGY 256
Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
+Q+DA EF+ +++D +H L+LQG ++G TA++ E ++ NK +
Sbjct: 257 -QQQDAHEFMRYLLDHLH---LELQGGFNGVSG--TAIL-----QENSSLAASNKCCING 305
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AV 408
+ ++ +FGG L++ V S PFL L LDI S+ V
Sbjct: 306 AS----TVVTAVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPV 361
Query: 409 HTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 362 CSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLR 421
Query: 468 TKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFND 524
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A +
Sbjct: 422 NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVH-EG 480
Query: 525 QWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+W HF+D++VT V +AY+LFY
Sbjct: 481 RWFHFNDSTVTLTDEDTVGKAKAYILFY 508
>gi|403334902|gb|EJY66621.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 716
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 168/382 (43%), Gaps = 56/382 (14%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPT--LTAFVGFVS 254
D L +GL N+ N CF+N LQ+L+S F +L + +++ K P L FV ++S
Sbjct: 366 DKLNKGLTNTTNCCFMNVILQSLLSIPAFFNMLVAISDNQEVMKELGPDSLLRKFV-YLS 424
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPS------MFEAVLKNFTPDVPNSISGRPRQEDAQ 308
+ P + +D PF+ + +F + +NF P +D
Sbjct: 425 MYFNP---------MLQMDRKSPFAANPVDAEKIFAELNQNFNP--------HQEHQDCH 467
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV--TRTQSFL 366
EFL+ ++D +HDEL KL + + DEW+ VG KN Q
Sbjct: 468 EFLAMLLDLLHDEL-KLIYVPPDVKDKEAVV------DEWQEVGNKNSKCKFNNDQQQIS 520
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
S ++DIFGG +++ + + S T +PF L+L++ ++E+ L F + +
Sbjct: 521 QSLINDIFGGIVRNEFQIDRSTNVSVTFEPFFFLNLEV--NRSESLEECLNNFFRSKIIN 578
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
Y+ +V A +I+ L ILIL L RF Y G K+ + + FP L + +
Sbjct: 579 DYKLE----GKIVRATHQQQIEKLPNILILQLKRFVY-RDGPVKIGEFIEFPEVLRIEDN 633
Query: 486 LLVT-----------PSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
L T GR Y L + H G S+GHY ++ W+ +DD +
Sbjct: 634 CLSTHLKLGTFNKEERDKNGRSYRLTSIGIHKGTQLSRGHYICYVLDASNNWIQYDDNKI 693
Query: 535 TA-IGTSKVLHDQAYVLFYKQV 555
I T V QAY+LFY+ +
Sbjct: 694 KKMIDTDTVFDSQAYLLFYELI 715
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V+FPL+ + + L+ P G Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGR 481
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVGKAKAYILFY 508
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 208/490 (42%), Gaps = 81/490 (16%)
Query: 111 NGHIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCD--------- 161
NGH K + GV+ K+D D +H + + S S F CD
Sbjct: 54 NGHAKKHFE-ETQAVGVSQRKSDKQDKEKYHHSVC--MDCSSYSVFCYRCDDFVVNDTKL 110
Query: 162 GNIDG-RDQNAAACNSSISGSKEVPMK---AINEPVKSVKD-----LLPRGLINSGNLCF 212
G + R+ + N ++ G ++ K +++ K +KD + GL N GN CF
Sbjct: 111 GQVQKVREHLQSLENFALMGDRQRKRKFQESLSADSKLMKDNDGIAVGATGLRNLGNTCF 170
Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTPSGGSSKKKNI 269
+NA LQ+L + F +EL P ++ G + + T S G S ++
Sbjct: 171 MNAILQSLSNIEQFSCYFKEL----------PAVSLRSGKTAGRRMYHTRSQGDS---SV 217
Query: 270 SVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFIMDQMHDE 321
S+++ R S+++ F+PD + S G +Q+DA EF+ +++D +H E
Sbjct: 218 SLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-QQQDAHEFMRYLLDHLHRE 276
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L G N A + + +D K + T S + S IFGG L++
Sbjct: 277 LQY---------GRNGASHAASPQDGVRLSAADGKCCINGTASVVTS----IFGGILQNE 323
Query: 382 VKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENLEGYR 428
V S PFL L LDI S+ T+ D LR F+ E L+
Sbjct: 324 VNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELD--E 381
Query: 429 TSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
T +KS K +Q L K+L LHL RF + + K+ V FPL+ + R
Sbjct: 382 TELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRG 441
Query: 486 LLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
L+ P E Y+LVA V HHG GHYTA + W HF+D++VT V
Sbjct: 442 YLLEPENSLPESCVYDLVAVVVHHGSGVGSGHYTAYGSH-EGCWYHFNDSTVTLTNEDAV 500
Query: 543 LHDQAYVLFY 552
+AY+LFY
Sbjct: 501 RKAKAYILFY 510
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ + NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--TILQENS--ALSASNKCCINGA 284
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 167/383 (43%), Gaps = 58/383 (15%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF------ 249
L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 157 LCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNG 216
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRPRQED 306
V V +F +K + L G FSP S+F V K +PN G +Q+D
Sbjct: 217 VSLVEEF---------RKTLCALWQGSQAAFSPESLFYVVWK----IMPN-FRGY-QQQD 261
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EF+ +++D +H EL QG NG + + V L E G + +
Sbjct: 262 AHEFMRYLLDHLHREL---QG---GFNGVSRSSVLLQENSGLSAGGRCCINGAS------ 309
Query: 367 PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIED 413
+ ++ IFGG L++ V S PFL L LDI S+ T+ D
Sbjct: 310 -TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCTLRD 368
Query: 414 ALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 369 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 428
Query: 473 SVRFPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHF 529
V FPL+ + + L+ P E Y+L A V HHG GHYTA A + +W HF
Sbjct: 429 YVEFPLRGLDMKCFLLEPENSRPENCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGRWFHF 487
Query: 530 DDASVTAIGTSKVLHDQAYVLFY 552
+D++VT VL +AY+LFY
Sbjct: 488 NDSTVTLTDEETVLRAKAYILFY 510
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 135 STTGICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 188
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 189 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 239
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ + NK +
Sbjct: 240 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--ALSGSNKCCINGA 289
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 290 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 345
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 346 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 405
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 406 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 464
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 465 WFHFNDSTVTLTDEDTVVKAKAYILFY 491
>gi|40555741|gb|AAH64516.1| USP10 protein, partial [Homo sapiens]
Length = 194
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 16/195 (8%)
Query: 373 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 1 IFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTK 60
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
V + V ++ L +L+LHL RF Y + G KL K++ +P+ L + ++LL +P
Sbjct: 61 QE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPG 116
Query: 492 AEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL- 543
+ R Y L A V HHG + GHYT D + WL DD +V I +V+
Sbjct: 117 VKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVK 176
Query: 544 ---HDQAYVLFYKQV 555
AY+L+Y++V
Sbjct: 177 PTAERTAYLLYYRRV 191
>gi|299470394|emb|CBN80155.1| Ubiquitin-specific protease 16 [Ectocarpus siliculosus]
Length = 1055
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 155/371 (41%), Gaps = 57/371 (15%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 253
K V + P GL N GN CFLNATLQ L P Q L + P+ G
Sbjct: 62 KQVHRMGP-GLRNLGNTCFLNATLQCLSYLPPLAQHLLKGFYGQGPQ----------GIA 110
Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN------SISGRP----R 303
S P GG + + +L + + + P + GR R
Sbjct: 111 SRGPRPMGGFREFTKVEILAAMEQHTKQVHQGQFTGLGAISPKVLVQNLRMIGRQFRQGR 170
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
QEDA EFL ++D+M D LK +G +S A R
Sbjct: 171 QEDAHEFLRHLLDKMVDCYLKRRGVKSS--------------------------APNRLA 204
Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
P ++ IFGG L+S +K + S T PF+ L +D+ S V +I+ ALR F A E
Sbjct: 205 ETTP--INRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDL-SRGVRSIDVALRRFVATE 261
Query: 423 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
L G G V A+KS+ + L+L L RF + ++ ++K+ ++F L
Sbjct: 262 RLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVF-TRKASKIKDHIQFADVL- 319
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
+L V+ Y+L V H G S GHY A R W DD SV+ +
Sbjct: 320 ---NLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWSRMDDCSVSKVKRET 376
Query: 542 VLHDQAYVLFY 552
VL DQAYVLFY
Sbjct: 377 VLRDQAYVLFY 387
>gi|170038530|ref|XP_001847102.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882245|gb|EDS45628.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1984
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 31/229 (13%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 253
+ PRGLIN N C++NA LQAL++C PF L++ +R+ +P A P + A V
Sbjct: 1389 IQPRGLINRSNYCYINAILQALVACPPFYHLMRAIRS--LPAARNSKHPKPFIDAMTALV 1446
Query: 254 SDFDT-P-----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
++F T P + +KK + P P + +L D+ + GR QEDA
Sbjct: 1447 AEFSTLPLRSKVARDKTKKDETPDITTDTPLEPVVIHKILALLRSDI-FQVEGR--QEDA 1503
Query: 308 QEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDE---------WETV-GPK 354
+EFL ++++++DE+L KL + +NG++ S AEE W+ + G +
Sbjct: 1504 EEFLGCVLNRLNDEMLELMKLSKNESEVNGSSGN--SSAEESGDGHGDDQDDWKVIRGNR 1561
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDI 403
NK +TRT F S +SDIFGG+L+S V +G+ + +QPF L LDI
Sbjct: 1562 NKGTITRTTDFGRSPMSDIFGGKLRSRVHREGDHPTDNIQPFFTLQLDI 1610
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 88/155 (56%), Gaps = 11/155 (7%)
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 469
+++DAL L + LEG S T + A + V ++ L ++ILHL F Y G TK
Sbjct: 1758 SVKDALDLLVGKDQLEGMTCSKTKQE--IQAWQQVTLEELPIVMILHLKCFDYKMDGCTK 1815
Query: 470 LHKSVRFPLQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-D 524
+ K++ FP++L + L+ + +A+ ++Y+L A V H G++ SKGHY D +
Sbjct: 1816 ILKTLEFPIELKIDSKLMSSKGKAYTAKQKQYKLFAVVYHDGKEASKGHYITDVFHAGYG 1875
Query: 525 QWLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 555
W+ +DD++V A+ VLH +A Y+L+Y+++
Sbjct: 1876 TWIRYDDSTVRAVPEFNVLHPKAPRVPYLLYYRRL 1910
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 175/413 (42%), Gaps = 62/413 (15%)
Query: 175 NSSISGSKEVPMKAINEPV---KSVKD-----LLPRGLINSGNLCFLNATLQALMSCSPF 226
NS++ G ++ K + P K +KD L GL N GN CF+NA LQ+L + F
Sbjct: 125 NSALMGERQRKRKLQDSPAGDGKLLKDSDGVALGATGLRNLGNTCFMNAILQSLSNIEQF 184
Query: 227 VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAV 286
+EL P + G + S ++S+++ R S+++
Sbjct: 185 SCYFKEL----------PAVALRSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSLWQGN 234
Query: 287 LKNFTPD--------VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA 338
F+PD + S G +Q+DA EF+ +++D +H EL S NGA+
Sbjct: 235 QTAFSPDSLFYAIWKIMPSFRGY-QQQDAHEFMRYLLDHLHREL------QYSRNGASHP 287
Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFL 397
L + +D K T S + S IFGG L++ V S PFL
Sbjct: 288 L---SPQDGVRLSSTDGKCCTNGTASVVTS----IFGGILQNEVNCLICGTESRKFDPFL 340
Query: 398 LLHLDIYSE------------AVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKK 442
L LDI S+ T+ D L F+ E L E Y T K
Sbjct: 341 DLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELDDTELYYCHKCKKRQKST--K 398
Query: 443 SVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GRKYEL 499
IQ L K+L LHL RF + + K+ V FPL+ + R L+ P Y+L
Sbjct: 399 KFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMRGYLLEPEKSLPGSCLYDL 458
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
VA V HHG GHYTA + +W HF+D++VT V +AY+LFY
Sbjct: 459 VAVVVHHGSGVGSGHYTAYGSH-EGRWYHFNDSTVTLTNEDTVRKAKAYILFY 510
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
GL N GN CF+N+ LQ L + LQ RD+ + P ++ F + T
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTPLMSEFAKLIQLLWT 106
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
S N SV SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 107 SS------PNDSV-------SPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 148
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 149 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 198
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 199 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 256
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 257 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 315
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + + Q W F+D+ VT + +S V AY+LF
Sbjct: 316 NHAVYNLYAVANHSGTT-MGGHYTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLF 374
Query: 552 YK 553
Y+
Sbjct: 375 YE 376
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 211
Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRPR 303
V V +F +K + L G FSP V+ P+ +
Sbjct: 212 GDTSVSLVEEF---------RKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGY-----Q 257
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
Q+DA EF+ +++D +H L+LQG NG + + V L E T+ +K V
Sbjct: 258 QQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAV-LQENS---TLSASSKCCVNGAS 307
Query: 364 SFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHT 410
+ ++ IFGG L++ V S PFL L LDI S+ V +
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 411 IEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 469
+ D LR F+ E L E + K IQ L K+L LHL RF + + K
Sbjct: 364 LRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNK 423
Query: 470 LHKSVRFPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQW 526
+ V FPL+ + + L+ P E Y+L A V HHG GHYTA A + +W
Sbjct: 424 VDTYVEFPLRGLDMKCYLLEPENSDPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRW 482
Query: 527 LHFDDASVTAIGTSKVLHDQAYVLFY 552
HF+D++VT V +AY+LFY
Sbjct: 483 FHFNDSTVTLTDEETVGKAKAYILFY 508
>gi|326427127|gb|EGD72697.1| hypothetical protein PTSG_04426 [Salpingoeca sp. ATCC 50818]
Length = 1574
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 37/358 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++NA LQ L + R R+ + S F
Sbjct: 1241 GLKNLGNTCYMNAVLQCLAHTKQLATYFVQKRYRN-----------HLNRRSKFGCKGEV 1289
Query: 263 SSKKKNISVLDIGRPF---SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ + + + R + SPSMF+ V ++ P Q+D QEF S ++D++H
Sbjct: 1290 AEELAELLTVLTSRQYRHLSPSMFKEVFASYCPQFAGY-----DQQDCQEFASMLLDKLH 1344
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L ++ + + + + + ++ A + W K + R S + +D+F GQ
Sbjct: 1345 EDLNRVVAKPPAKDLDLSGMDAVRAGNEAW-------KQCIARDNSII----TDLFQGQF 1393
Query: 379 KSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
+SV + + SAT PF L L + +++ +RLFS EN+ G
Sbjct: 1394 RSVTRCNTCRYESATYSPFTSLSLPVPPHGRYSLHHCIRLFSRQENMTGNNQWKCPKCKA 1453
Query: 438 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
A K + I L + L++HL RF + K++ + FP L LG+D +++ S ++
Sbjct: 1454 YRDAIKFMGIWRLPRCLLIHLKRFYFNGPFRDKINTMIDFPQNLQLGKDDVMSFSRPEQR 1513
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A H+G + GHY A A++ +W +DD+ V+ + +V+ AYVLFY
Sbjct: 1514 ENYSLYAVANHYG-TLTGGHYIAFAKHAG-RWEKYDDSVVSPMAPQQVVTPAAYVLFY 1569
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 157/365 (43%), Gaps = 63/365 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 379 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 438
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 439 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 478
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L + G SL E + + +F
Sbjct: 479 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 510
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 511 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 569
Query: 434 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 570 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 623
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 624 AGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGA 683
Query: 548 YVLFY 552
Y+LFY
Sbjct: 684 YMLFY 688
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 158/365 (43%), Gaps = 63/365 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 268 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 327
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 328 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 367
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L + G SL E + + +F
Sbjct: 368 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 399
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 400 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 458
Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+ V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 459 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 512
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 513 AGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGA 572
Query: 548 YVLFY 552
Y+LFY
Sbjct: 573 YMLFY 577
>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
[Equus caballus]
Length = 394
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 54 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 107
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 108 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 157
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 158 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 206
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 207 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 266
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 267 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 326
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 327 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY 382
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 158/365 (43%), Gaps = 63/365 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 437 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIHLLLRLHSKDCCSKNWCLMCELEQYAS 496
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 497 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 536
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L + G SL E + + +F
Sbjct: 537 VMSMQAACLD------GLGGEKQVEQSLQET----------------------TLIQQMF 568
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG+LKS VK + + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 569 GGRLKSKVKCLRCHHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGDNMYKCG 627
Query: 434 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 628 RCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 681
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 682 AGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSLNQVMSEGA 741
Query: 548 YVLFY 552
Y+LFY
Sbjct: 742 YMLFY 746
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 157/365 (43%), Gaps = 63/365 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 435 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 494
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 495 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 534
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L + G SL E + + +F
Sbjct: 535 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 566
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 567 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 625
Query: 434 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 626 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 679
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 680 AGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGA 739
Query: 548 YVLFY 552
Y+LFY
Sbjct: 740 YMLFY 744
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 157/380 (41%), Gaps = 72/380 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLT-----------AFV 250
GL N GN CFLNATLQ L P Q L + +P P ++
Sbjct: 137 GLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWL 196
Query: 251 GFVSDF------DTPSGGSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPR 303
G V D + +GG + ++ + GR P SP LK N R
Sbjct: 197 GLVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKAL-----NRHFRVGR 251
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
QEDA EFL ++D + L+ R +
Sbjct: 252 QEDAHEFLRHLLDALQSGCLQ----------------------------------AARVK 277
Query: 364 SFLPSALSD------IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
S P L++ IFGG L+S V+ Q S T FL L L+I+ + V +E+AL
Sbjct: 278 SNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGK-VGRLEEALA 336
Query: 417 LFSAPENLE-GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
F+A E L+ R + +V A+K + T + + L RF +GS+ S+KL K+V
Sbjct: 337 RFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSR-SSKLSKNVA 395
Query: 476 FPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
+P L L L P R Y L + H G + GHY + + N W DDA V
Sbjct: 396 YPESLRLS---LSGPEGSAR-YRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVR 451
Query: 536 AIGTSKVLHDQAYVLFYKQV 555
+G VLH AY+LFY +V
Sbjct: 452 QVGLPTVLHQHAYLLFYVKV 471
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 212 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 262
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 263 ----AKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 313
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 314 HSEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 363
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 364 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 421
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 422 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLSTFVNFPLKDLDLRE-FASQSC 480
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 481 NHAVYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLF 539
Query: 552 YK 553
Y+
Sbjct: 540 YE 541
>gi|429240193|ref|NP_595732.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe
972h-]
gi|384872646|sp|O60139.2|UBP4_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 4;
AltName: Full=Deubiquitinating enzyme 4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|347834304|emb|CAA18405.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe]
Length = 593
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 171/395 (43%), Gaps = 77/395 (19%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCS----PFVQ---LLQELRTRDIPKAGYPTLT 247
S ++ P GL N GN C++N LQ L +C P +Q LLQ + T++ G +
Sbjct: 220 SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 279
Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
AF + G R SP F ++++ D SI G Q DA
Sbjct: 280 AFFSLLQSVLLNHG-------------QRSISPRNFLEIVQSLNRDF--SIDG---QCDA 321
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---------------EWETVG 352
QEFL+F +D++H++L + N + + + L E+ EW
Sbjct: 322 QEFLNFFLDKLHEDL--------NSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHL 373
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPF--LLLHLDIYSEAVH 409
NKS V F GQL S + + S T PF L + +D S V
Sbjct: 374 RSNKSIVVNN-----------FVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV- 421
Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++++ L FSAPE L+G+ V +AKK + I L + LI+ + RF G
Sbjct: 422 SLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRK 481
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF 522
K+ + LQ + +LV PS + Y L A + H+G+ GHY +D F
Sbjct: 482 KIDTPLGLSLQ--IPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQ-LENGHYISDV-LF 537
Query: 523 NDQWLHFDDASVTAIGTSKVLHD---QAYVLFYKQ 554
N++W H DD+ V +G L + +Y+LFYK+
Sbjct: 538 NNEWCHIDDSIVRTVGGITDLREDFSSSYILFYKR 572
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 288 GLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 338
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 339 ----AKLIQLLWTSSPNESVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 389
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ A+T + +DE K++ R Q S +SD+F GQL
Sbjct: 390 HSEVNRVLVRPR----ASTDSLDHLPDDE------KSRQMWRRYQEREDSRISDLFVGQL 439
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 440 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 497
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS S+KL V FPL+ + R+ + S
Sbjct: 498 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLDLRE-FASQSC 556
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 557 NHAVYNLYAVSNHSGTT-MGGHYTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLF 615
Query: 552 YK 553
Y+
Sbjct: 616 YE 617
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ F+G + G
Sbjct: 726 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQVDINRSN------FLGHKGEVAEEFG 779
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 780 IIMK-----ALWAGQYRYISPKDFKMTIGK----INDQFAGY-SQQDSQELLLFLMDDLH 829
Query: 320 DELLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L D W N+S + +F GQ
Sbjct: 830 EDLNKADNRKRYKEENNDDLDDPKAADLAWHKHKQLNESIIVA-----------LFQGQF 878
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T+++ RLFS E L + R +
Sbjct: 879 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECFRLFSKEEKLTDNNRFYCSHCKT 938
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + ++
Sbjct: 939 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDVSQYVIGPKSNSKR 998
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A H+G GHYTA + Q W FDD V+ I TS V AY+LFY
Sbjct: 999 YNLFAVSNHYG-GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1054
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 157/364 (43%), Gaps = 45/364 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI----PKAGYPTLTAFVGFVSDFD 257
GL N GN CF+N+++Q L +P V++ L RD+ P L G +
Sbjct: 4 GLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLMKLL 63
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
G S SP F+A L F P G Q+D+QE L+F++D
Sbjct: 64 WQGGVGS-------------VSPKGFKAALARFAPQF-----GGYSQQDSQELLAFLLDG 105
Query: 318 MHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
+H++L +++ E G +V+ + W+ +N S V D
Sbjct: 106 LHEDLNRVRQKPYVEEADAEGRPDKVVA---AEAWDNYRKRNDSVVV-----------DH 151
Query: 374 FGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL-RLFSAPENLEGYRTSS 431
F G KS +V Q + +S PF+ L L + S T+ L F PE L+ +
Sbjct: 152 FQGLYKSTLVCPQCSFSSVKFDPFMYLSLPLPSSKTRTLYITLIYAFLQPEQLDAADSWY 211
Query: 432 TGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
G V A+K + + +L ++L++HL RFSY KL V FPL + L+
Sbjct: 212 CGRCKEHVRAEKKLDLWSLPELLVVHLKRFSYSRHSRDKLDAPVHFPLSALDLSSFLLRE 271
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
Y+L A H G GHYTA R +D W FDD+ V+ S V AY+L
Sbjct: 272 QDVAPVYDLYAVSNHFG-GLGGGHYTAYCRMDDDGWHCFDDSHVSPADESSVQSKAAYLL 330
Query: 551 FYKQ 554
FY++
Sbjct: 331 FYRR 334
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 165/367 (44%), Gaps = 51/367 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFVSDFD 257
GL N GN CF+N+ LQ L + + + + R+ P G + AFV +
Sbjct: 202 GLRNIGNTCFMNSILQCLSNTTILREYCMDETYKGEINRNSPMKG-DLMRAFVEVLVRLW 260
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
P+G S SP+ F++ ++ F+P Q+D QEFL F+++
Sbjct: 261 KPNGIS--------------HSPNNFKSKIQKFSPRFMGY-----EQQDCQEFLRFLLEG 301
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+H+++ +++ +S L L+ E T+ SF+ D+F GQ
Sbjct: 302 LHEDINRVRIKSKE------PLRELSHLSPQEKARATWSWYTTKDDSFI----FDLFVGQ 351
Query: 378 LKSVVKAQGNK-ASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSST 432
L+S ++ Q + S T PF L L I YS V TI D L F+ E L+
Sbjct: 352 LESSLECQECRHTSLTYDPFWDLSLPISKKMYSNEVTTITDCLDNFTREETLDKDEKPIC 411
Query: 433 GNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
V T K + I K+L+LHL RF+ GS+ KL+ V+FP+ + R+ + +
Sbjct: 412 ERCKVRRTMTKKLSIHKFPKVLVLHLKRFNEGSRYRQKLNNLVKFPVTSLNLRN-FASKT 470
Query: 492 AEGR---KYELVATVTHHGRDPSKGHYTADARYFNDQ---WLHFDDASVTAIGTSKVLHD 545
EG Y+L A H G GHYTA +N WL ++D+SV I V
Sbjct: 471 REGNLPPTYDLYAVSNHCG-SCYGGHYTAYC--YNSSSHAWLEYNDSSVNPISDGDVCTK 527
Query: 546 QAYVLFY 552
+AYVLFY
Sbjct: 528 EAYVLFY 534
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
GL N GN CF+N+ LQ L + LQ RD+ + ++ F + T
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 79
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
S S SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 80 SSPNDS-------------VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 171
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 172 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 229
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 230 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 288
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 289 NHAVYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLF 347
Query: 552 YK 553
Y+
Sbjct: 348 YE 349
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 163/361 (45%), Gaps = 40/361 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTA-FVGFVSDFDTPS 260
GL N GN CF+N+ +Q L P ++ L++ T +I A F F + +
Sbjct: 2 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
S+ + IS P F + ++ F P Q+D+QEFL +++ +H+
Sbjct: 62 RSSNGEYAIS---------PQAFRSQIQKFAPRFMGY-----SQQDSQEFLHYLLQGLHE 107
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
++ ++ + E D+ + K A R F S + D F GQLKS
Sbjct: 108 DINRITSRPRHVT---------TEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKS 158
Query: 381 VVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
+K G+K S T PF L L I S++V TI+ L LF+ E L+G + N
Sbjct: 159 TLKCSVCGHK-SVTFDPFWDLSLPIPKSSDSV-TIQQCLSLFTKEEVLDGDEKPTCSNCK 216
Query: 437 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
KS I KIL+LHL RFS G + KL+ V FPL +L + P
Sbjct: 217 TRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPLT-----NLDLCPYMSNS 271
Query: 496 KYEL--VATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y + + V++H GHYTA + + +W +D VT + +S+V +AYVLFY
Sbjct: 272 HYVMYNLYAVSNHSGSTYSGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFY 331
Query: 553 K 553
+
Sbjct: 332 E 332
>gi|213407610|ref|XP_002174576.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212002623|gb|EEB08283.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 473
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 169/397 (42%), Gaps = 65/397 (16%)
Query: 189 INEPVKSVKDLL---PRGLINSGNLCFLNATLQALMSCSPFVQL------LQELRTRDIP 239
+N P K K+ + P GL N GN C++N+ LQ +CSPFV L L+ L +
Sbjct: 108 LNSPAKVGKNTISISPVGLTNLGNSCYMNSILQCCFACSPFVSLFIDGQALRSLNQNNPL 167
Query: 240 KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS 299
G TAF +S + L SP K+F +V + S
Sbjct: 168 GTGGKLTTAF-------------TSLSHQVRALQGQGVCSP-------KDFLANVCSIYS 207
Query: 300 --GRPRQEDAQEFLSFIMDQMHDELLKLQGE------STSINGANTAL-VSLAEEDEWET 350
Q DAQEFL+F +D +H++L G+ +T A L +S EW
Sbjct: 208 EFDTASQHDAQEFLNFFLDSLHEDLNSSAGKAPLPELTTEQQAAKERLPMSHLANIEWNI 267
Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH 409
+N S + +D+F GQL S +K + S T PF L L I
Sbjct: 268 YKRRNSSPI-----------ADLFFGQLASQIKCLTCQRTSTTFAPFSSLALPIKDTTTS 316
Query: 410 -TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
T+E + FS E L+G V AKK++ + L +LI L RF
Sbjct: 317 CTLETCISAFSMQEVLQGNNAWHCPKCDVPRDAKKTMSVSRLPSVLIFQLKRFRMIGTTH 376
Query: 468 TKLHKSVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADARY 521
K+ S+ F ++ G ++V PS E YEL A V H+G D GHYTA +
Sbjct: 377 RKIETSLEFKKRISSG--MIVPPSFQSSIYYEPVDYELFAFVNHYG-DLENGHYTATV-F 432
Query: 522 FNDQWLHFDDASVTAIGTSKVLHDQ---AYVLFYKQV 555
N W + DDA V + K ++ AY+LFY++V
Sbjct: 433 HNYDWYYCDDAIVQPVTDFKRIYQNFSTAYILFYQKV 469
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 172/412 (41%), Gaps = 67/412 (16%)
Query: 157 HVLCDGNIDGRDQNAAACNSSISGSKEVPM-KAINEPVKSVKDLLPR-------GLINSG 208
+VL G++ N N + + +P K+I P + + +LL R GL+N G
Sbjct: 55 YVLLSGSLKRDKMNGVKNNGEVKTIEGIPRPKSILFPPEKL-ELLWRKSGRVGAGLVNLG 113
Query: 209 NLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSGGSSKKK 267
N CFLN+ LQ L P L + R + G + + +GG S
Sbjct: 114 NTCFLNSALQCLTYTPPLANYLMSNQHRAQCRVNGQFCMLCSLQHHQSASFGNGGKSI-- 171
Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG 327
RP + +LKN + GR QEDA EF+ + +D M L
Sbjct: 172 --------RPMN------ILKNLRIIAKHLQFGR--QEDAHEFIRYSVDAMQRSCLFGLP 215
Query: 328 ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN 387
I+ T LV IFGG L+S VK +
Sbjct: 216 SKLDIHTKTTTLVY------------------------------QIFGGYLRSRVKCRQC 245
Query: 388 KA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKS 443
+A S T PFL L LDI + + + L F PE L G Y+ + V A K+
Sbjct: 246 RAVSDTFDPFLDLSLDINKQESNDLRKCLENFVKPELLHGDNLYKCYQCKKS--VPASKT 303
Query: 444 VKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATV 503
I +L + L RFS S K+++ + +P +L LG + EG Y+L A +
Sbjct: 304 FSIHRPPNVLTVQLKRFS--SFMGNKINRDITYPSKLNLG-PYTSSDRNEGPIYDLYAVL 360
Query: 504 THHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
H G + GHY A A+ N QW F+D+SV + + + L+ QAY+LFY +V
Sbjct: 361 VHSGFSCNSGHYYAYAKAANGQWYCFNDSSVNQVSSHQALNQQAYLLFYHRV 412
>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
8 [Papio anubis]
Length = 1109
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 769 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 822
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 823 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 872
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 873 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 921
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 922 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 981
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 982 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1041
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1042 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1097
>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
Length = 1011
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 671 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 724
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 725 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 774
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 775 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 823
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 824 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 883
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 884 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 943
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 944 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY 999
>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
caballus]
Length = 1117
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 777 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 830
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 831 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 880
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 881 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 929
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 930 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 990 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1049
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1050 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY 1105
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 167/364 (45%), Gaps = 44/364 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L + + + ++ F+S + G
Sbjct: 4 GLKNLGNTCFMNSILQCLSNTKALTSFVLD--------------NSYSRFISGKSSMHGK 49
Query: 263 -----SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+S +++ D SP+ F++ ++ F P Q+DAQEFL F++
Sbjct: 50 LMEAYASLMRSMWKSDTKETALSPATFKSQIQRFAPRFVGY-----SQQDAQEFLRFLLA 104
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT--QSFLPSALSDIF 374
+H++LL E I +S E DE + P++K+ +S S ++++F
Sbjct: 105 GLHEDLLHNSREKPKI-------ISTEEYDE---LQPEDKAVYCWKLYKSTDDSKVAELF 154
Query: 375 GGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSS 431
GQLKS ++ K S T PF L L I + T+ D L+LF+ E L G T S
Sbjct: 155 VGQLKSTLECTVCKNQSVTFDPFWDLSLPIPKISTITLLDCLKLFTREETLSGDNMPTCS 214
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
V KK + +Q +IL++H RFS G TKL+ + FP+ + + T S
Sbjct: 215 KCKTKTVCTKK-LSVQKFPQILVIHFKRFS-GIHYRTKLNTLIDFPIDKLDLLNFAGTTS 272
Query: 492 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVL 550
KY L A H G GHYTA + + Q W F+D V + +++V QAYVL
Sbjct: 273 TISCKYNLYAISNHSGSTVG-GHYTAYCKSPHTQTWYMFNDTRVQPVSSNEVKSSQAYVL 331
Query: 551 FYKQ 554
FY+Q
Sbjct: 332 FYEQ 335
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 166/364 (45%), Gaps = 43/364 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVG-FVSDFDTPS 260
GL N GN CF+N+ +Q L + ++ LLQ+ DI T +A G + F
Sbjct: 425 GLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDIN----TTTSAMKGSLIKAF---- 476
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
KK S R + S ++ ++ F P Q+DAQEFL ++++ +H+
Sbjct: 477 -AEVIKKLWSQDASDRVVNTSSLKSQIQRFAPRFIGYA-----QQDAQEFLRYLLEGLHE 530
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
++ +++ + I + E DE T K+ + R S + D F GQLKS
Sbjct: 531 DVNRVKEKPKPI---------ITEIDEKLTDSEKSAESWNRYLRMDNSKIVDYFVGQLKS 581
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHT-IEDALRLFSAPENLEG-YRTSSTGNAGV 437
+K S T PF L L I A + L F+ E L+G + + +
Sbjct: 582 TLKCTHCGHCSVTFDPFWDLSLPIPQRAGQVRLAQCLDSFTREETLDGDEKPTCSKCKER 641
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL------VTPS 491
KS IQ KIL++HL RFS + KL +V FPL+ G D+ +TP
Sbjct: 642 RKCTKSFTIQKFPKILVIHLKRFSLAERFRGKLSVTVDFPLE---GLDMSNYAADNITPC 698
Query: 492 AEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
+Y L A H G S GHYTA R+ + W ++D+ V++I + ++ +AYVL
Sbjct: 699 ----RYNLYAISNHSGTTYS-GHYTAYCRHPYTKAWHEYNDSRVSSISSKAIVSGEAYVL 753
Query: 551 FYKQ 554
FY+Q
Sbjct: 754 FYEQ 757
>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
Length = 1117
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 777 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSN------LLGHKGEVAEEFG 830
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 831 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 880
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 881 EDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA-----------LFQGQF 929
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 930 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 990 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLAQYVIGPKNNLKK 1049
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1050 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1105
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 669 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 722
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 723 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 772
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 773 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 821
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 822 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 881
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 882 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 941
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 942 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 997
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 158/365 (43%), Gaps = 64/365 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D K G + + S
Sbjct: 430 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSKNGC-LMCELEQYAS 488
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 489 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 528
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L + G SL E + + +F
Sbjct: 529 VMSMQAACLD------GLGGEKHVEPSLQET----------------------TLIQQMF 560
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 561 GGRLKSKVKCLRCLHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 619
Query: 434 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 620 RCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPEML----DMVPFVTG 673
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 674 AGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSPNQVMSEGA 733
Query: 548 YVLFY 552
Y+LFY
Sbjct: 734 YMLFY 738
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 746 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 799
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 800 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 849
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 850 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 898
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 899 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 958
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 959 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1018
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1019 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1074
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 745 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 798
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 799 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 848
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 849 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 897
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 898 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 957
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 958 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1017
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1018 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1073
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 164/376 (43%), Gaps = 75/376 (19%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
S + GL N GN CF+NA LQ+L S L++E R TL A
Sbjct: 394 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFRK---------TLCALWQ--- 435
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
GS FSP S+F V K +PN G +Q+DA EF+ +
Sbjct: 436 -------GSQTA-----------FSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRY 471
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D +H L+LQG NG + + + E T+ NK + + ++ I
Sbjct: 472 LLDHLH---LELQG---GFNGVSRSAIL----QENSTLSASNKCCINGAST----VVTAI 517
Query: 374 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSA 420
FGG L++ V S PFL L LDI S+ V ++ D LR F+
Sbjct: 518 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 577
Query: 421 PENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
E L E + K IQ L K+L LHL RF + + K+ V FPL+
Sbjct: 578 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLR 637
Query: 480 LVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
+ + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++VT
Sbjct: 638 GLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTL 696
Query: 537 IGTSKVLHDQAYVLFY 552
V+ +AY+LFY
Sbjct: 697 TDEETVVKAKAYILFY 712
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCNMCAMEAHVTQSLLH 109
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 110 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNT 144
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 145 MHESCLR---------------------------GCKQSETTSKDSSLI----YDIFGGQ 173
Query: 378 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 174 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKVEELQGDNAYYCGRCR 231
Query: 437 -VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 232 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 288
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 289 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 153/361 (42%), Gaps = 74/361 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCNMCAMEAHVTQSLLH 109
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 110 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNT 144
Query: 318 MHDELLK--LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
MH+ L+ Q E+TS + S + DIFG
Sbjct: 145 MHESCLRGCKQSETTSKDS---------------------------------SLIYDIFG 171
Query: 376 GQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
GQ++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 172 GQMRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKVEELQGDNAYYCGR 229
Query: 435 AG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 230 CREKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAG 286
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY
Sbjct: 287 PLPYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYV 346
Query: 554 Q 554
Q
Sbjct: 347 Q 347
>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 152/366 (41%), Gaps = 65/366 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
V DL PRGL+N GN C+ NA LQ L P + LL +R + + + V
Sbjct: 375 VIDLTPRGLVNCGNSCYANAVLQCLTCTKPLIVFLLHRSHSRACCEIDWCLMCELEQHV- 433
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P SPS ++N + G QEDA EFL +
Sbjct: 434 --------------MMLRECGGPLSPSRILLHMRNINHQI-----GDGSQEDAHEFLRLL 474
Query: 315 MDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
+ M L KL GE + V P+ + + +
Sbjct: 475 IASMQSICLEKLGGE--------------------DKVDPRLQET---------TFIQHT 505
Query: 374 FGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
FGG+L+S VK + + S + + L L+I+ V ++EDAL F+ PE L+G
Sbjct: 506 FGGRLRSKVKCLRCHHESERYENIMDLTLEIFG-WVKSLEDALTQFTTPEELDGENMYRC 564
Query: 433 GN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
G A V A+K + I IL + L RF G G K++K + FP L D++ +
Sbjct: 565 GRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYG--KINKCITFPDML----DMIPFMT 618
Query: 492 AEGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 546
G Y L A V H + GHY A + W DD V + S+V+ +
Sbjct: 619 GTGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTEVHPVSMSQVMLEG 678
Query: 547 AYVLFY 552
AY+LFY
Sbjct: 679 AYILFY 684
>gi|365985329|ref|XP_003669497.1| hypothetical protein NDAI_0C05950 [Naumovozyma dairenensis CBS 421]
gi|343768265|emb|CCD24254.1| hypothetical protein NDAI_0C05950 [Naumovozyma dairenensis CBS 421]
Length = 1080
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 151/335 (45%), Gaps = 90/335 (26%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------------ 345
QEDA+EFL+ ++DQ+H+E++ E + N L S+ +E
Sbjct: 750 QEDAEEFLTQLLDQLHEEIISA-IECLTDNEIENLLQSITDEQLKIFIIRNLSRYNKAEF 808
Query: 346 -----------------------------DEWETV------GPKNKSAVTRTQSFLPSAL 370
+EW V G KNK+AV RT PS +
Sbjct: 809 ITKISPKLKELINKYGTMTDDTNDSGDSSNEWHEVSGTSKKGKKNKTAVKRTVDVTPSPI 868
Query: 371 SDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
S+IFGGQ +SV+ NK S T+ PF + LDI ++ +E A + FS E L ++
Sbjct: 869 SNIFGGQFRSVLDIPFNKESQSITLDPFQTIQLDISDPMINDLETAFKKFSEFE-LLPFK 927
Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-----QGST----------KLHKS 473
+SS + V AKK I L ++L++ L RFS+ S G T K+ K
Sbjct: 928 SSSGKD---VEAKKQTFIDKLPQVLLIQLKRFSFVSNIGKDNGMTNYNSYNGRIEKIRKK 984
Query: 474 VRFPLQLVLGRD----LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND--QWL 527
+ + +L++ + ++ + RKY+L A V HHG P GHYTAD Y D +W
Sbjct: 985 INYNHELLVPVESVSSAILKNNESSRKYKLRAVVYHHGSSPDGGHYTADI-YNKDLKKWF 1043
Query: 528 HFDDASVTAIGTSKVLH--------DQAYVLFYKQ 554
DD ++T + + V++ AY+L Y++
Sbjct: 1044 MIDDVNITELEDADVVNGGDNGLDTRTAYILMYEK 1078
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----LTAFVG 251
+K ++ RG++N N+CF+++ LQ L+SC PF+ +L TR++ P+ L A V
Sbjct: 560 IKSIVSRGIVNVANICFMSSILQMLLSCKPFIDVLNVTSTRNLNSRVGPSSTKLLDACVA 619
Query: 252 FVSDFD 257
S+FD
Sbjct: 620 LYSEFD 625
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
GL N GN CF+N+ LQ L + LQ RD+ + ++ F + T
Sbjct: 113 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 172
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
SS +N+S PS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 173 ----SSPNENVS---------PSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 214
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ A+T + +DE K++ R Q S +SD+F GQL
Sbjct: 215 HSEVNRVLVRPR----ASTDTLDHLPDDE------KSRQMWRRYQEREDSRISDLFVGQL 264
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 265 KSSLTCSECGYCSTAFDPFWDLSLPIPKKSYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 322
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS ++KL V F L+ + R+ + S
Sbjct: 323 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRTSKLTTFVNFQLKDLDLRE-FASQSC 381
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 382 NHAVYNLYAVSNHSG-TTMGGHYTAYCKNPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLF 440
Query: 552 YK 553
Y+
Sbjct: 441 YE 442
>gi|313233845|emb|CBY10014.1| unnamed protein product [Oikopleura dioica]
Length = 1046
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 174/391 (44%), Gaps = 57/391 (14%)
Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL------------RTRDIPKAGYP--- 244
+PRGLIN N C++N+ LQ + C P LL +L T++I + G
Sbjct: 678 VPRGLINQANSCWVNSILQTALVCDPLYHLLCKLLKYTSNSNGENQNTKEIARIGAEIKR 737
Query: 245 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 304
L FD I V G + + P + S+ Q
Sbjct: 738 MLPTCAKLAEVFD----------QIVVNKGGMAYEAKDIYGHISTLNPTI--SVG----Q 781
Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT-- 362
+DA+E LS +++ MHDE++ L+ ++ IN + V+ A E W+ G + AV +
Sbjct: 782 QDAEEGLSLLLNAMHDEIVALK-KAAGINTKASQAVTSAGEG-WQVSGRQRAFAVATSAT 839
Query: 363 -QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIY------SEAVHTIEDA 414
+F + +S F G +S +K +++ T +PF L +++ SE +IE+
Sbjct: 840 GSAFDETPISAGFRGISQSSIKLPSHQSPPPTEEPFFTLKVEVPPPPMPGSEKAISIEEC 899
Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG--STKLHK 472
LRL E L+ YR TG + VTA + V + L LILH+ RF + + K+ +
Sbjct: 900 LRLTPKEETLDEYRL-KTGQS--VTATRKVSLAALPPFLILHMKRFQFNPRTLEVKKIDR 956
Query: 473 SV----RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLH 528
V R ++ L L + G YEL V HHG GHYTA+ + +W
Sbjct: 957 KVTVKERITIEPYLQSPALREQTRGGVDYELRGMVLHHGISAEGGHYTAEVKR-GTKWYR 1015
Query: 529 FDDASVTAIGTSKVLHDQA----YVLFYKQV 555
DD V+ + S+VLH + Y+L + ++
Sbjct: 1016 IDDNRVSEMKLSEVLHADSRRTPYLLLWARL 1046
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 63/365 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 431 ARGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSSKNWCLMCELEQYAS 490
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 491 ---------------TLRESGGPLSPSRILSNLRNIGCRL-----GGGTQEDAHEFLRHL 530
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L + G SL E + + +F
Sbjct: 531 VMSMQAACLD------GLGGEKHVEPSLQET----------------------TLIQQMF 562
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 563 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGDNMYKCG 621
Query: 434 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V A+K + + + IL L L RF G G K++K V FP L D++ +
Sbjct: 622 RCSAYVKARKQLSVHEVPNILTLVLKRFQSGKYG--KINKCVTFPDML----DMVPFVTG 675
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + + GHY + + WL DD+ V + ++V+ + A
Sbjct: 676 SGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGA 735
Query: 548 YVLFY 552
Y+LFY
Sbjct: 736 YMLFY 740
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 270 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 320
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 321 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 371
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 372 HNEVNRVTARPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 421
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGY-RTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 422 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGEEKPTCC 479
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 480 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 538
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVTA+ +S+V AY+LF
Sbjct: 539 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPATGEWHTFNDSSVTAMSSSQVRTSDAYLLF 597
Query: 552 YK 553
Y+
Sbjct: 598 YE 599
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 380 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 437
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 438 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNA 472
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 473 MHESCLR---------------------------GCKQSETSSKDSSLI----YDIFGGQ 501
Query: 378 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA- 435
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 502 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKLEELQGDNAYYCGRCR 559
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 560 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 616
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 617 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 675
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 149/361 (41%), Gaps = 71/361 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + + AG+ L A VS
Sbjct: 93 GLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSCHIAGFCALCAIQNHVS------- 145
Query: 262 GSSKKKNISVLDIGRPFSPS----MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
++ GR SP + +NF + RQEDA E++ +++
Sbjct: 146 -------CALQATGRIVSPQDMVGNLRCISRNFR---------KARQEDAHEYMVNLLES 189
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
MH L G + GA F S + IFGG+
Sbjct: 190 MHKCCLP-SGVPSESPGA-----------------------------FEKSLVHKIFGGR 219
Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSST 432
L+S VK Q + +S PFL L L+I +++ AL F+A E L+G Y
Sbjct: 220 LRSQVKCRQCSYSSNKFDPFLDLSLEILK--ADSLQKALANFTAAELLDGGEKQYHCQRC 277
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
V A K + I +L +HL RF Y + K+ K VRF L L V+ S+
Sbjct: 278 KQK--VQAVKQLTIHKAPYVLAIHLKRF-YAHDPNIKIKKKVRFDSALNLKP--FVSGSS 332
Query: 493 EGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
+G KY L + H G GHY R N+ W DD V+ +G +VL+ QAY+LF
Sbjct: 333 DGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRVSHVGEQEVLNQQAYMLF 392
Query: 552 Y 552
Y
Sbjct: 393 Y 393
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 163/371 (43%), Gaps = 50/371 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQ-----ELRTRDIPKAGYPTLTAFVGFVSDF 256
GLIN GN CF+N+ LQ L + P LQ E+ ++ +G + AF V
Sbjct: 168 GLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDNEINIQNPMGSGGVVIKAFANLVRQI 227
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
S SP F V+ F N I RQ+D+QEFL +++D
Sbjct: 228 WNQKEDS--------------VSPDEFLRVISYF-----NKIYSSGRQQDSQEFLLYLLD 268
Query: 317 QMHDELLKLQG-----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
Q+H++L +++ + N + D W +NKS +
Sbjct: 269 QIHEDLNRVEKKPYVEQKEYFKNLNQKELEKLAADSWGDYLKRNKSVIV----------- 317
Query: 372 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEG-Y 427
D+F GQLK+ +K K A +PF+ L + I +A + I+D + F+ E L+G
Sbjct: 318 DLFQGQLKNTLKCLKCKTAKYQFEPFMYLTVPIPQKAENEINIQDCIEQFTEKEILDGDE 377
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDL 486
+ ++K + + L IL++ + RF Y +Q K+ V+FP+Q + +
Sbjct: 378 KWFCPECKDFQKSEKKIDLWKLPPILMICMKRFQYTAQSKKKITTKVQFPVQHFDMSEFI 437
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIG--TSKVL 543
T E Y+L + ++H G + GHY A + D QW F+D+ + I +
Sbjct: 438 PKTLQKEKPIYDLFSVISHKGY-LNFGHYVAYCKNQEDKQWYLFNDSKTSLIQDPEENIP 496
Query: 544 HDQAYVLFYKQ 554
+AYVLFY++
Sbjct: 497 KKEAYVLFYQK 507
>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
Length = 493
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 153/356 (42%), Gaps = 53/356 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL+N+ N CFLNA L L +P Q LL + ++ G+ L A V+ T +
Sbjct: 78 GLVNAFNTCFLNAVLCCLTYTAPLTQYLLTDNHKKNCTIHGFCGLCAMSEHVNKCFTTAK 137
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ IS P+ F + LK + N + GR QEDA EF F++D
Sbjct: 138 SLMRFSAIS---------PNYFTSNLKKISS---NLLLGR--QEDAHEFFMFLLDAFTKS 183
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + T EED + IFGG+L+S
Sbjct: 184 YTPLNSKLTP-----------QEEDA--------------------GLVHTIFGGKLQSQ 212
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
V KA S + FL L + I E +I++AL F + ++GY + V A
Sbjct: 213 VTCNNCKANSNSYDRFLDLSVQINGEK--SIQNALSRFIEADTIDGYNCDACKQK--VRA 268
Query: 441 KKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K + + L++HL RF Y S G K+HKSV+FP L + + + +Y+
Sbjct: 269 YKQMTANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKEKKVQAAEYK 328
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H G GHY A + WL +D +V + ++VL +AY+LFY+Q
Sbjct: 329 LYAVLVHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLSQRAYMLFYEQ 384
>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Gallus
gallus]
Length = 1125
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 785 GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSN------FLGHKGEVAEEFG 838
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 839 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 888
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 889 EDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIV-----------ALFQGQF 937
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 938 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 997
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 998 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1057
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1058 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1113
>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Gallus
gallus]
Length = 1116
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSN------FLGHKGEVAEEFG 829
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 830 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 879
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIV-----------ALFQGQF 928
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 988
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1048
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1104
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 97 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 154
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 155 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNA 189
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 190 MHESCLR---------------------------GCKQSETSSKDSSLI----YDIFGGQ 218
Query: 378 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 219 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKLEELQGDNAYYCGRCR 276
Query: 437 -VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 277 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 333
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 334 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 392
>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
guttata]
Length = 1087
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 160/357 (44%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 747 GLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSN------FLGHKGEVAEEFG 800
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + + + SG Q+D+QE L F+MD +H
Sbjct: 801 VIMK-----ALWAGQYKYISPKDFKITIGK----INDQFSGYS-QQDSQELLLFLMDGLH 850
Query: 320 DELLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L S A E W N+S + +F GQ
Sbjct: 851 EDLNKADNRKRYKEENNDHLDDSSAAEIAWHKHKQLNESIIV-----------ALFQGQF 899
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 900 KSTVQCLTCHKRSRTFEAFMYLSLPLASSSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 959
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 960 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKTSLKR 1019
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1020 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1075
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 163/377 (43%), Gaps = 54/377 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+NA LQ+L + F +EL P + G +
Sbjct: 85 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVALRSGKTAGRRMYHTR 134
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFI 314
S ++S+++ R S+++ F+PD + S G +Q+DA EF+ ++
Sbjct: 135 SQGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGY-QQQDAHEFMRYL 193
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+D +H EL S NGA+ + + +D + K PS ++ IF
Sbjct: 194 LDHLHREL------QYSRNGASHPV---SPQDGVRLSSAEGKCCTNGA----PSVVTSIF 240
Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAP 421
GG L++ V S PFL L LDI S+ T+ D L F+
Sbjct: 241 GGLLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDL 300
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
E L+ T +KS K I L K+L LHL RF + + K+ V FPL
Sbjct: 301 EELD--ETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYVEFPL 358
Query: 479 QLVLGRDLLVTP--SAEGRK-YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
+ + R L+ P S G Y+LVA V HHG GHYTA + W HF+D++VT
Sbjct: 359 KGLDMRGYLLEPENSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSH-EACWYHFNDSTVT 417
Query: 536 AIGTSKVLHDQAYVLFY 552
V +AY+LFY
Sbjct: 418 LTNEDTVRKAKAYILFY 434
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 149/362 (41%), Gaps = 62/362 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL+N GN CFLNA LQ L Q LL + TR G L V + S
Sbjct: 203 GLVNMGNTCFLNAVLQCLTYTPALAQFLLSDDCTRMSRNKGPDALHNLATHVRRALSSSA 262
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
G S V S + K F RQEDA EF+ F+++ +
Sbjct: 263 GPSITPQAIV---------SKLRTIYKRFRLG---------RQEDAHEFMRFLIEALQ-- 302
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+A+ ++ + DE +S T S + IFGG L+S
Sbjct: 303 --------------KSAVSTVGQLDE--------RSKTT-------SVIHGIFGGYLRSQ 333
Query: 382 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGV 437
V+ K S T PFL L L+I T++ ALR F +PE L YR G
Sbjct: 334 VRCLSCKYESNTYDPFLDLSLEIGK--CQTLDKALRHFFSPEKLLRENQYRCD--GCRKY 389
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA----E 493
V A K L +L + L RFS+ S +K+ + V++P L + + T A
Sbjct: 390 VDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYPEILDMAPYVNKTQQASMTDR 449
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
G +Y L A + H G GHY R N+ W DDA V+ +V+ QAY+LFY
Sbjct: 450 GTRYRLYAVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTASQQEVMRQQAYILFYT 509
Query: 554 QV 555
++
Sbjct: 510 RI 511
>gi|402218406|gb|EJT98483.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 865
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 182/415 (43%), Gaps = 71/415 (17%)
Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFD 257
+P GL N+GNLCF N LQ L+ C PF +L+ E+ R G P L A V F+
Sbjct: 462 VPMGLWNTGNLCFANCILQTLVYCGPFYELVTEIGQRIGGAVGGRTPFLDAMVLFLRQIP 521
Query: 258 TPSGGSSKKKNISVLD---IGRPFSPSMFEAVLKN-----FTPD-VPNSISGRPR----- 303
+ K + +D +G P S + V+K PD V N +S P+
Sbjct: 522 ITTSPDPWKARLDEVDFPGLGGPASEAAKMEVIKQKESQGMVPDYVYNGLSDYPKSKQIL 581
Query: 304 ---QEDAQEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSL--------------- 342
QED EF F++D + +E +LK+ + + A++ S
Sbjct: 582 KGGQEDVDEFFCFLLDVLEEELLTVLKIFSANPTPASASSTQASFGGKKLTPGKPDDEFE 641
Query: 343 -------------AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA 389
AE+ EW VG +NK V+R+ +A++ +F + ++V + G K
Sbjct: 642 VRRPVSPGTAARGAEDGEWTEVGKRNKKVVSRSILAAETAITKLFCLKTRTVDRRPGAKD 701
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 449
+ ++P L L + E + IE AL F++ E +EG S + V + TL
Sbjct: 702 AVLIEPQQRLSLSVIDEKITNIEQALHAFASVETMEGTNLS-----------RQVMLDTL 750
Query: 450 SKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTH 505
+L+L L R+ G K K + L + + L +P SA KY L A + H
Sbjct: 751 PPVLVLQLQRWGPRRNGRWEKTEKEIAITQILEIPNEAL-SPARRSAILPKYRLFAVLYH 809
Query: 506 HGRDPSKGHYTADA-RYFNDQWLHFDDASV---TAIGTSKVLHDQ-AYVLFYKQV 555
G +GHYT D R +W+H+D+ + + G K+ + AY+L+Y ++
Sbjct: 810 DGLSAQQGHYTLDVLRQDCSEWIHYDNEQISLASPPGEEKLRDGRVAYMLYYLRI 864
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 163/364 (44%), Gaps = 47/364 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----SAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 161 HNEVNRVTVRPKS----NPENLDRLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + + S PF L L I Y E T+ D +RLF+ + L+G +
Sbjct: 211 KSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 434 NAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
G K+ +K IQ KIL+LHL RFS ++KL V FPL+ + R+ +
Sbjct: 269 RCGA--RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVSFPLRDLDLRE-FASE 325
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYV 549
+ Y L A H G GHYTA R +W F+D+SVT + +S+V AY+
Sbjct: 326 NTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYL 384
Query: 550 LFYK 553
LFY+
Sbjct: 385 LFYE 388
>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
gallopavo]
Length = 1124
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 784 GLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRSN------FLGHKGEVAEEFG 837
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 838 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 887
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 888 EDLNKADNRKRYKEENNDHLDDLRAAELAWQKHKQLNESIIV-----------ALFQGQF 936
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 937 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 996
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 997 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1056
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1057 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1112
>gi|167518329|ref|XP_001743505.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778604|gb|EDQ92219.1| predicted protein [Monosiga brevicollis MX1]
Length = 328
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 24/281 (8%)
Query: 276 RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGA 335
R +P F+A L +F P + +Q+DAQEF SF +D +H++L +++ + N
Sbjct: 56 RYLAPKFFKATLASFAPQFEGT-----QQQDAQEFASFFLDGLHEDLNRVRKKVCDCN-L 109
Query: 336 NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQ 394
+ LA + W ++ S + D+F GQ +S ++ S
Sbjct: 110 DGMPDHLAADKAWNEYLTRHNSIIV-----------DLFQGQYRSAMRCLTCGHESLNFS 158
Query: 395 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILI 454
PF+ L L I + I L+ F E + G+R A A K++ I L +L+
Sbjct: 159 PFMFLTLPIPANPSVDIRACLQEFVRAERVNGWRCPKCKCAR--DASKTLSIWRLPPLLM 216
Query: 455 LHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSK 512
+HL RF++ KL V FPL + +D + P + R Y+L H+G + S
Sbjct: 217 IHLKRFTFSGPFRDKLSTRVDFPLTNLKIQDGVANPKLQEQKRDYKLFGVSNHYG-NMSG 275
Query: 513 GHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 552
GHY A R F +W FDD++V+ + S+V + AY+LFY
Sbjct: 276 GHYIAFCRDFQSRRWYKFDDSAVSPMPESQVCSNAAYLLFY 316
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 120/254 (47%), Gaps = 40/254 (15%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
RQED+ EFL ++D MH+ LK ++ P +A T
Sbjct: 33 RQEDSHEFLRCLLDAMHEACLK----------------------RFKPKPPPELAATT-- 68
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+ IFGG+L+S ++ +G + S T PFL L L+I ++E AL F+AP
Sbjct: 69 ------FVYRIFGGRLRSQIECEGVDYVSRTYDPFLDLSLEI--NRAQSLERALSAFTAP 120
Query: 422 ENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
E L+G YR N +V A K + ++ +L +H RF YG G+ K++K V F
Sbjct: 121 EVLDGPNKYRCPK--NNKLVRAVKRISVEEAPNVLTVHFKRFEYGGFGA-KINKKVDFGT 177
Query: 479 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 538
QL L R + + YEL + HHG + GHY + N W DD VTA+G
Sbjct: 178 QLDL-RPYMSNVKGPQQLYELYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTAVG 236
Query: 539 TSKVLHDQAYVLFY 552
VL +AY+LFY
Sbjct: 237 ERTVLDQRAYILFY 250
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 160/369 (43%), Gaps = 40/369 (10%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGF 252
K+V+ L GL N GN CF+N+ LQ L + LQ RD+ + F
Sbjct: 321 KTVQGLT--GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEF 378
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
K I L P SPS F+ ++ + P Q+DAQE
Sbjct: 379 A-------------KLIQALWTSSPNESVSPSEFKTQIQRYAPRFVGY-----NQQDAQE 420
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H E+ ++ G++ +L L +E+ K + R + S
Sbjct: 421 FLRFLLDGLHSEVNRILVRPK--GGSSDSLDHLPDEE-------KGRQMWMRYLAREDSR 471
Query: 370 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIE--DALRLFSAPENLEG 426
+ D+F GQLKS + S PF L L I ++ + D LRLF+ + L+G
Sbjct: 472 IGDLFVGQLKSSLTCSVCGHCSTAFDPFWDLSLPIAKKSYGEVNLADCLRLFTKEDILDG 531
Query: 427 YRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
+ + T K IQ KIL+LHL RFS S+KL V FPL+ + R+
Sbjct: 532 DEKPTCCHCKARTKCTKKFSIQRFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLDLRE 591
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLH 544
+ S Y L A H G GHYTA + + +W F+D+ VT + S V
Sbjct: 592 -FASQSCNHAVYNLYAVSNHSGTT-MGGHYTAYCKNPVSGEWHAFNDSRVTPLSASHVRS 649
Query: 545 DQAYVLFYK 553
AY+LFY+
Sbjct: 650 SDAYLLFYE 658
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 161/359 (44%), Gaps = 37/359 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + + A + +F
Sbjct: 262 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSH----AHTALMEEF----- 312
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + I SPS F+ ++ F P Q+DAQEFL F++D +H+E
Sbjct: 313 -AKLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGY-----NQQDAQEFLRFLLDGLHNE 366
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ ++ S N N L L +E+ K + + S + D+F GQLKS
Sbjct: 367 VNRVTVRPKS-NPEN--LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQLKSS 416
Query: 382 VKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
+ + S PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 417 LTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 474
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 475 ARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHA 533
Query: 496 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LFY+
Sbjct: 534 VYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYE 591
>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 146/356 (41%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + ++ AG+ L A VS
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSR------ 155
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ GR +P + L+ + + N+ RQEDA E++ +++ MH
Sbjct: 156 --------ALQSSGRILAPKDLVSNLRCISRNFRNA-----RQEDAHEYMVNLLESMHKC 202
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L L S S + +LV IFGG+L+S
Sbjct: 203 CLPLGLPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 232
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSSTGNAGVV 438
VK Q + S PFL L LDI +I A + F+ PE L+G + V
Sbjct: 233 VKCMQCSXCSNKFDPFLDLSLDIV--KADSIYKAFKNFTTPELLDGGXRQYQCQQCKQKV 290
Query: 439 TAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-K 496
A K + +L +HL RF SY + K+HK + F L L V+ S +G K
Sbjct: 291 KALKQFTVHKAPYVLTIHLKRFQSYNLE--EKIHKKIHFGPTLDLAP--FVSGSYDGDLK 346
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + HHG GHY R + W DD V+ +G V QAY+LFY
Sbjct: 347 YTLYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFY 402
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 326
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 377
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 378 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 427
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 428 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 485
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 486 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 544
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 545 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 603
Query: 552 YK 553
Y+
Sbjct: 604 YE 605
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 161/359 (44%), Gaps = 37/359 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + + A + +F
Sbjct: 263 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSH----AHTALMEEF----- 313
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + I SPS F+ ++ F P Q+DAQEFL F++D +H+E
Sbjct: 314 -AKLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGY-----NQQDAQEFLRFLLDGLHNE 367
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ ++ S N N L L +E+ K + + S + D+F GQLKS
Sbjct: 368 VNRVTVRPKS-NPEN--LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQLKSS 417
Query: 382 VKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
+ + S PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 418 LTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 475
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 476 ARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHA 534
Query: 496 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LFY+
Sbjct: 535 VYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYE 592
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 158/361 (43%), Gaps = 43/361 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 128 GLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 178
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 179 ----AKLIQLLWTSSPNHSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 229
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD+F QL
Sbjct: 230 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVAQL 279
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 280 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 337
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 338 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 396
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 397 NHAVYNLYAVSNHSGATMG-GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVPTSDAYLLF 455
Query: 552 Y 552
Y
Sbjct: 456 Y 456
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 65/386 (16%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
K L GL N GN CF+NA LQ+L + F +Q+L P+L + S
Sbjct: 147 KRLRRSGLRNLGNTCFMNAVLQSLSNIQTFCGYIQQL----------PSLEQKM---SKK 193
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR--PR-----QEDAQE 309
+ ++ ++ V++ R ++++ +P+ S+ + PR Q+DA E
Sbjct: 194 KITTRSCTEGNDVFVVEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHE 253
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
F+ +++D++H EL+ L + ++ N+ V P KS+V
Sbjct: 254 FMRYLLDRLHTELMTLIPYNATVR-PNSPYVG----------SPLGKSSV---------- 292
Query: 370 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS------------EAVHTIEDALR 416
++ IFGG L+S V S PFL + LDI S E V + D L
Sbjct: 293 VTAIFGGILQSEVNCLICGMESKKHDPFLDISLDIPSKFTCKTPNPKNGEIVCDLSDCLS 352
Query: 417 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
F+ E LE N + K I+ L +L LHL RF + + K+ +
Sbjct: 353 SFTDVEELEDTELYMCANCKCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRVKVDTHIN 412
Query: 476 FPLQLVLGRDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFNDQW 526
FPL+ + ++ E R KY+L A V HHG GHYT+ A + W
Sbjct: 413 FPLRGLEMNHFMLDNLHETRNSSASGSQSKYDLAAVVVHHGSGAGSGHYTSYAVH-EGGW 471
Query: 527 LHFDDASVTAIGTSKVLHDQAYVLFY 552
HF+D+SVT V +AY+LFY
Sbjct: 472 YHFNDSSVTQCDEETVAKCKAYILFY 497
>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
Length = 629
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 155/362 (42%), Gaps = 34/362 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+NA LQ L S P R T ++D
Sbjct: 282 GLRNLGNTCFMNAVLQCLSSTKPLRDYCLRREFRQEQPCTLRTQQELTEALADV------ 335
Query: 263 SSKKKNISVL---DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
I+ L D +PS F++V + + P S +G Q+DAQEFL F+MD++H
Sbjct: 336 ------IATLWHPDTSEAANPSRFKSVFQKYVP----SFTGY-SQQDAQEFLKFLMDRLH 384
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
E+ + +G + ++ S+ E+ E + + R S + D+F GQLK
Sbjct: 385 VEINR-KGRKSPCILSDAKWPSVLEDSETLSDDEQANQMWKRYLEREDSKIVDLFVGQLK 443
Query: 380 SVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
S +K Q S T + F L L I ++ ++ D LF+ E L+
Sbjct: 444 SCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLLDCFNLFTKEEELDSENAPVCDK 503
Query: 435 AGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
T + K + IQ +IL+LHL RFS K V FPLQ L + A
Sbjct: 504 CRQRTRSTKKLTIQRFPRILVLHLNRFSTTRYSIKKCSVYVDFPLQ-QLNLKEFASEKAG 562
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQ--WLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA + DQ W F+D+ V+ I +++ + YVLF
Sbjct: 563 TPVYNLYALCNHSG-SVHYGHYTA---FCKDQSGWRVFNDSRVSPISENQIPSSEGYVLF 618
Query: 552 YK 553
Y+
Sbjct: 619 YE 620
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 282 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 332
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 333 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 383
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 384 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 433
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 434 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 491
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 492 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 550
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 551 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 609
Query: 552 YK 553
Y+
Sbjct: 610 YE 611
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 550 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 608
Query: 552 YK 553
Y+
Sbjct: 609 YE 610
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 550 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 608
Query: 552 YK 553
Y+
Sbjct: 609 YE 610
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A V +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSS----NAHTALVEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVAPRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ +A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGS----SAHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVAPRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ T + G + +F
Sbjct: 274 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH----TSSVHTGLMEEF----- 324
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 325 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 375
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S ++ L L +++ K + + S + D+F GQL
Sbjct: 376 HNEVNRVAVRPKS---SHENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 425
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 426 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 483
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 484 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLRE-FASENT 542
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 543 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 601
Query: 552 YK 553
Y+
Sbjct: 602 YE 603
>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1003
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 160/384 (41%), Gaps = 67/384 (17%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLL-----QELRTRDIPKAGYPTLTAFV--GFV 253
P+G +N GN CFLN+T+Q L PF Q L E + + K F+
Sbjct: 242 PKGFVNLGNTCFLNSTVQCLAYLPPFCQSLLSILSHESKHGEKRKTSQGRKVTFILRSLF 301
Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRP-RQEDAQEFL 311
S GG++ G +P ++ +AV + RP RQEDA EFL
Sbjct: 302 SQVHGIDGGTTHS--------GSSLAPRAIVQAVPTLGSCGSRKGYKFRPGRQEDAHEFL 353
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
++D M+D LK G + + +G W P + T + +
Sbjct: 354 VHLLDAMNDGELKEAGINQNASG-------------WRDRLPIPRLDET-------TFIH 393
Query: 372 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RT 429
IFGG +S V+ N S T P L L L++ +A +++ AL F+ E L+ +
Sbjct: 394 RIFGGYFRSQVRCTSCNNRSNTYDPLLNLSLEVSRKACNSVAQALHEFTRKETLDSQNQW 453
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--------------GSTKLHKSVR 475
+G V A K + + L + L RF+Y + G K+ KS+
Sbjct: 454 KCSGCKKYVCATKQLTVFRPPLSLCIQLKRFTYSGRLKFSVGFGSFGNGGGGQKISKSIE 513
Query: 476 FPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARY----FNDQWLHF 529
FP QL L P ++GR Y L V H G S GHYTA R QW H
Sbjct: 514 FPAQLKL-------PLSDGRSCGYSLTGIVIHVGGSASSGHYTAYVRKPGGGSKSQWFHM 566
Query: 530 DDASVTAIGTSKVLHDQ-AYVLFY 552
DD+ V A+ VL + AY+LFY
Sbjct: 567 DDSFVEAVSEQTVLRQRDAYLLFY 590
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|323305299|gb|EGA59046.1| Ubp3p [Saccharomyces cerevisiae FostersB]
Length = 497
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 172/407 (42%), Gaps = 103/407 (25%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 83 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 142
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
FD + +KK + D + S F+ A PD ++S
Sbjct: 143 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 199
Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
P+ QEDA+EFL+ ++DQ+H+EL
Sbjct: 200 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 259
Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
L G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 260 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 319
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS
Sbjct: 320 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 379
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 468
E L SS+GN V AKK I L ++L++ RFS+ + +
Sbjct: 380 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGR 435
Query: 469 --KLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHH 506
K+ K +++ +L++ + + T + R+Y+L + H
Sbjct: 436 IEKIRKKIKYXHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHQ 482
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 152/365 (41%), Gaps = 65/365 (17%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGF 252
K+V ++ GL N GN CFLN+ +Q P V+ LL + + G+ + AF
Sbjct: 146 KAVPLMIGAGLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCHSPNDGHNGFCVICAF--- 202
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+ S+ GR SP +F LK F+ D R +QEDA EF+
Sbjct: 203 -----------RYQMKQSLESTGRVISPVVFVDNLKQFSSDF-----RRHQQEDAHEFMQ 246
Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
+D++ S EED +
Sbjct: 247 CALDKLE------------------TCFSNFEED---------------------NIAKK 267
Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
+FGG L S ++ +++S T + + L L+I E V +I AL F+ EN++
Sbjct: 268 VFGGSLVSKLRCCNCSRSSITNEQLIDLSLEI--ENVDSISSALESFTMVENIDAKLKCE 325
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
N V K+ + QT S I HL RF + G+ K+ K + FPL+L L ++
Sbjct: 326 GCNEEVSVEKQLMLDQTPS-IAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPYTILNE 384
Query: 491 SAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
S KY+L A V H+G GHY R D W DD+ VT + VL +AY+
Sbjct: 385 SDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTVLSQEAYI 444
Query: 550 LFYKQ 554
LFY +
Sbjct: 445 LFYAR 449
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 160/364 (43%), Gaps = 71/364 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDT 258
GL N GN C++N+ +Q+L+ P F L Q+L G P + AF V + F
Sbjct: 201 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNV-AFDAVAAMQTFAK 259
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP----RQEDAQEFLSFI 314
S SK N +P F LK F RP RQEDA E+L F+
Sbjct: 260 GSLMGSKPTN----------APRDFNRNLKAF---------ARPLRQGRQEDAHEYLRFL 300
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
++ + L + A SL +D R SF+ IF
Sbjct: 301 LEALQQGCL------------SRASKSLKPDDP------------IRATSFV----QKIF 332
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S V + S T PF+ L LD+ + ++++ DA R F A + L G Y+
Sbjct: 333 GGKLRSRVTCHKCGHNSDTFDPFMDLSLDV-RKGINSLTDAFRAFVAKDQLTGSEKYKCD 391
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVT 489
V A K I+T L +HL RFS +G K+ + V F +L + L V
Sbjct: 392 KCKRK--VDATKQFTIETAPPALTVHLKRFSPFGG----KISRQVAFDEKLNIAPYLSVN 445
Query: 490 PSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-AY 548
+Y+L A V H+G P+ GHY A R +W DD+ V+ +G+S L DQ AY
Sbjct: 446 HGPV--RYKLYAVVHHYGSGPNSGHYVASVRSPFGKWTRMDDSHVSEMGSSGPLGDQSAY 503
Query: 549 VLFY 552
+LFY
Sbjct: 504 ILFY 507
>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
Length = 1110
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 159/357 (44%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + L DI ++ F+G + G
Sbjct: 770 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSN------FLGHKGEVAEEFG 823
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 824 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 873
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W N+S + +F GQ
Sbjct: 874 EDLNKADNRKRYKEENNDHLDDLRAAELAWHKHKQLNESIIV-----------ALFQGQF 922
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 923 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 982
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 983 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1042
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1043 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1098
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 41 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 91
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 92 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 142
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 143 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 192
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 193 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 250
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 251 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 309
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 310 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 368
Query: 552 YK 553
Y+
Sbjct: 369 YE 370
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 149/355 (41%), Gaps = 62/355 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P +L ++ + G+ + ++ + SG
Sbjct: 112 GLQNLGNTCFLNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQSHITQALSNSG 171
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
K + + D+ R + K+F QEDA EFL + +D M
Sbjct: 172 NVIKPMPV-INDLRR---------IAKHFRFG---------NQEDAHEFLRYTVDAMQKA 212
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L NG+N T+ +F+ IFGG L+S
Sbjct: 213 CL---------NGSNKL------------------DRHTQATTFI----HQIFGGYLRSR 241
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
VK K S T P+L + L+I S +I AL F PE L+G Y+ S +
Sbjct: 242 VKCMNCKGVSDTFDPYLDITLEIKS--AQSINKALEQFVKPEQLDGENAYKCSKCKK--M 297
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
V A K + S +L L L RF+ S G K+ K V++P L + R + P+ E Y
Sbjct: 298 VPASKRFTVHRASNVLTLSLKRFANFSGG--KITKEVKYPEYLDI-RPYMSQPNGEPIIY 354
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G GHY + N QW +D++V+ VL+ QAYVLFY
Sbjct: 355 ALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFY 409
>gi|296086860|emb|CBI33027.3| unnamed protein product [Vitis vinifera]
Length = 894
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 155/370 (41%), Gaps = 73/370 (19%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
V ++ PRGL+N GN C+ NA LQ L P + LLQ +R + +
Sbjct: 402 VFNISPRGLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTCCVTNWCLMCEL----- 456
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+K + + + G P SPS + +++ + G QEDA EFL +
Sbjct: 457 ----------EKHVMMLRESGGPLSPSRILSHMRSINCQI-----GDGSQEDAHEFLRLL 501
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G G + A + +F+ F
Sbjct: 502 VTSMQSICLEKLG------------------------GEREVDARLQETTFI----QHTF 533
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+I+ V ++EDAL F+ PE+L+G YR
Sbjct: 534 GGRLRSKVKCLRCHLESERYENIMDLTLEIFG-WVESLEDALTQFTTPEDLDGENMYRCR 592
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL-VT 489
V A+K + I IL + L RF G G K++K + FP D+L +
Sbjct: 593 RC--TTYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFP-------DMLDMI 641
Query: 490 PSAEGRK-----YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKV 542
P G Y L A V H + GHY A + W DDA V + T++V
Sbjct: 642 PFMTGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQV 701
Query: 543 LHDQAYVLFY 552
+ + AY+LFY
Sbjct: 702 MSEGAYILFY 711
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 74 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 124
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 125 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 175
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 176 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 225
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 226 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 283
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 284 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 342
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 343 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 401
Query: 552 YK 553
Y+
Sbjct: 402 YE 403
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 164/376 (43%), Gaps = 75/376 (19%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
S + GL N GN CF+NA LQ+L S L++E R TL A
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFR---------KTLCALWQ--- 193
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
GS FSP S+F V K +PN G +Q+DA EF+ +
Sbjct: 194 -------GSQT-----------AFSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRY 229
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D +H L+LQG NG + + + L E+ T+ NK + + ++ I
Sbjct: 230 LLDHLH---LELQG---GFNGVSRSAI-LQEKS---TLSASNKCCINGAST----VVTAI 275
Query: 374 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSA 420
FGG L++ V S PFL L LDI S+ V ++ D LR F+
Sbjct: 276 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 335
Query: 421 PENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
E L E + K IQ L K L LHL RF + + K+ V+FPL+
Sbjct: 336 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLR 395
Query: 480 LVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
+ + L+ P G Y+L A V HHG GHYTA A + +W HF+D++VT
Sbjct: 396 GLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGRWFHFNDSTVTV 454
Query: 537 IGTSKVLHDQAYVLFY 552
V +AY+LFY
Sbjct: 455 TDEETVGKAKAYILFY 470
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 164/366 (44%), Gaps = 44/366 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFV--GFVSDFDTPS 260
GL N GN CF+N+ +Q L + +LL++ RD K T+ + ++ F
Sbjct: 72 GLRNLGNTCFMNSVIQCLSN----TRLLRDYCRRDEHKDEVNKTTSNMKGALINAFANLM 127
Query: 261 GGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
K G P SP+ F++ + F Q+DAQEFL ++++
Sbjct: 128 HSIWK---------GAPDTHVSPNDFKSQIARFAKRFVGY-----NQQDAQEFLMYLLEG 173
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+H+++ +++ + + + +ED+ +TV + + Q+ S + DIF GQ
Sbjct: 174 LHEDVNRVKEKRKN---------RIYDEDDSKTVSAQEMWKMYLHQN--DSKIVDIFVGQ 222
Query: 378 LKSVVKAQG-NKASATVQPFLLLHLDI-----YSEAVHTIEDALRLFSAPENLEG-YRTS 430
LKS + G S T PF L L I Y V ++E LF++ E L+G +
Sbjct: 223 LKSSLTCTGCGHVSDTFDPFWDLSLPIKKGHGYGNDV-SLESCFELFTSEEVLDGDEKPM 281
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
+ KS IQ K+LI+HL RF+ S +KL V FPLQ +
Sbjct: 282 CSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRSKLSTMVNFPLQSLELNQFAAEK 341
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYV 549
+ Y L A H G P GHYTA ++ W HF D V+ I S+V +AYV
Sbjct: 342 NGAPAMYNLFAVSNHSG-TPFGGHYTAYTKHPETSTWHHFSDTRVSQISESQVQSSEAYV 400
Query: 550 LFYKQV 555
LFY+ V
Sbjct: 401 LFYELV 406
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 172/365 (47%), Gaps = 46/365 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L S QL A Y ++ + D ++ G
Sbjct: 7 GLRNLGNTCFMNSILQCL---SHTKQL-----------ADYCMNENYIFDLKDSNSSMKG 52
Query: 263 SSKKKNISVL-DIGR----PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ K +++ + R SPS F+A ++ F P Q+D+QEFL F+++
Sbjct: 53 ALMKAFANLIRQMWRGSSDAVSPSAFKAQIQKFAPRFVGY-----NQQDSQEFLRFLLEG 107
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP--SALSDIFG 375
+HD++ K+Q + S ++++E E + + K+ + L S ++D+F
Sbjct: 108 LHDDINKVQVKPKP---------SYSDDEEIEKLSDERKARHAWNKYLLRDNSQITDLFV 158
Query: 376 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR--TSST 432
GQLKSV++ S T PF L L I ++ + D LR F E L+G T S
Sbjct: 159 GQLKSVLQCTHCQHCSVTFDPFWDLSLPIPKKSSIDVRDCLRDFVEEEILDGDEKPTCSK 218
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
A K+ +Q L KIL+LHL RFS G + KL +V FPL L P +
Sbjct: 219 CKARRKCTKRFF-LQRLPKILVLHLKRFS-GMRYRQKLSTTVNFPLA-KLNLQEFTCPES 275
Query: 493 EGR---KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAY 548
G Y+L A H G GHYTA +Y W F+D+ V++I S V+ +AY
Sbjct: 276 RGSAPATYDLYAVSNHSG-TTFGGHYTAYCKYPTTGDWHCFNDSRVSSISASSVISSEAY 334
Query: 549 VLFYK 553
VLFY+
Sbjct: 335 VLFYE 339
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 151/356 (42%), Gaps = 66/356 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 260
GL N GN C++NATLQ L P +L + ++ +G+ L A F+ +P
Sbjct: 57 GLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQTCRPSGFCMLCAVETHFLWALHSPG 116
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P +A+ F R RQEDA EFL F +D
Sbjct: 117 ------------DVIQPC-----QALAAAFH---------RNRQEDAHEFLVFTVDA--- 147
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
LK G +N VGPK +++ IFGG KS
Sbjct: 148 --LKAAGLPGLMN----------------VVGPKEDKSLSH----------QIFGGYWKS 179
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
+K Q S T+ P+L + LDI + +++ AL PE L+G G T
Sbjct: 180 QIKCLQCQGVSDTLDPYLDIALDI--KTADSVQQALEQLVKPEELDGENAYECGICLKKT 237
Query: 440 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K++ +Q+ +LI L RFS + K+ + V++P L + R + S +Y
Sbjct: 238 AASKTLVLQSSGNVLIFVLKRFSDFT--GEKIARQVQYPECLDM-RPYMSQQSGRPLEYV 294
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H G KGHY + N W DDA VTA + VL+ AYVLFY Q
Sbjct: 295 LYAALVHVGLRCQKGHYFCYVKAGNGHWYKMDDAKVTACDITSVLNQSAYVLFYVQ 350
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 16 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 66
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 67 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 117
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 118 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 167
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 168 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 225
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 226 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 284
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 285 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 343
Query: 552 YK 553
Y+
Sbjct: 344 YE 345
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 169/384 (44%), Gaps = 68/384 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN F+N+ LQ L + +P L++ +I + D P G
Sbjct: 10 GLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINR----------------DNPLG 53
Query: 262 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + I + GR +P MF+ + F P SG +Q+D+QE L+F+
Sbjct: 54 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFL 108
Query: 315 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+D +H++L +++ E NG A+V+ ++ WE +N S +
Sbjct: 109 LDGLHEDLNRVKKKPYLELKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 155
Query: 371 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIE----------------- 412
D F G KS +V + K S T PF L L + + +E
Sbjct: 156 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEGPMLQPQKKKKTTVALR 214
Query: 413 DALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 471
D + LF+ E L + N A K + +L KIL++HL RFSY KL
Sbjct: 215 DCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLD 274
Query: 472 KSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFD 530
V FP++ + + + SA Y+L+A H+G GHYTA A+ N +W +FD
Sbjct: 275 TVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGA-MGVGHYTAYAKNKLNGKWYYFD 333
Query: 531 DASVTAIGTSKVLHDQAYVLFYKQ 554
D++V+ +++ AYVLFY++
Sbjct: 334 DSNVSLASEDQIVTKAAYVLFYQR 357
>gi|255083302|ref|XP_002504637.1| predicted protein [Micromonas sp. RCC299]
gi|226519905|gb|ACO65895.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 172/406 (42%), Gaps = 77/406 (18%)
Query: 181 SKEVPMKAINEPVK---SVKDLLP---RGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
+++ + A+ EPV +V D +P RGL N GN CFLN+ LQAL +P +L R
Sbjct: 5 TRDTALAAL-EPVDLRWTVGDDVPPVGRGLRNLGNSCFLNSILQALTHTAPLAKLCLARR 63
Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPD 293
TA ++ ++ + I R +P E V N
Sbjct: 64 H-----------TANCAL----------TNAREPCAFCIIERHAIAP---EEVFGNLRLL 99
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGP 353
+ + GR QEDA E L ++ M D L G ++ G + S+ + E
Sbjct: 100 ARHFVRGR--QEDAHELLRLSLEAMDDSCLANCGRPSARRGGHRGQSSVVFDPE------ 151
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDI--------- 403
T + P+A+ IF G+ +++V+ A+ S T PFL + L++
Sbjct: 152 ------TGARLAPPTAVERIFQGKFRNLVRCARCGHESKTYDPFLDVSLELPGREDRSSH 205
Query: 404 -----------YSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTL 449
A ++E AL+ F+ E LEG YR + + A K + I
Sbjct: 206 GGGYGPGYLRGSGSARGSVESALKNFTEEERLEGENAYRCERCKD--LCPATKRLTIHEA 263
Query: 450 SKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGR 508
IL++HL RF YG K++ V F +L LG + G Y L A VTH G
Sbjct: 264 PAILVVHLKRFDHYGG----KINSPVDFTERLTLGGHMSEDAEEAGPAYRLYAMVTHSGN 319
Query: 509 DPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
D Y A +D+W DD+SV + + V +QAYVLFY++
Sbjct: 320 DAIASFYGAATNASDDEWYLCDDSSVRRVNRADVFDEQAYVLFYER 365
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+ F
Sbjct: 550 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFF 608
Query: 552 YK 553
Y+
Sbjct: 609 YE 610
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 164/361 (45%), Gaps = 40/361 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRT-RDIPKAGYPT---LTAFVGFVSDFDT 258
GL N GN CF+N+ LQ L + +P + E R +DI K+ ++ + +
Sbjct: 161 GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRYLKDINKSSSMNGMLFRSYADLMKEIWD 220
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P +S SPS F++ ++ F P Q+D+QEFL ++++ +
Sbjct: 221 PDMANSST------------SPSRFKSQIQRFAPRFMGY-----SQQDSQEFLRYVLEGL 263
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
H E+ ++Q + + E E P N+ A + +L S + D+F
Sbjct: 264 HMEVNRVQKRP----------IPTKPDYEAEDRLPDNEKANLYWRRYLSMDNSEIVDLFV 313
Query: 376 GQLKSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTG 433
GQL S ++ A + S T PF L L I + I D L LF++ E L+G R +
Sbjct: 314 GQLMSTLECADCSFKSTTFDPFWDLSLPIPKKPNVNILDCLNLFTSKEELDGDERAICSR 373
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSA 492
KS IQ +IL+LHL RFS G + +K+ V +PL+ L L + +
Sbjct: 374 CKTRRRCTKSFSIQKFPQILVLHLKRFS-GERFRSKMSVMVDYPLRNLDLIEFATSSCTQ 432
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
+ +Y+L A V++H GHYTA + W F+D+ V I + + + YVLF
Sbjct: 433 KSAQYKLYA-VSNHSGSVYTGHYTASCLNPYTGDWHSFNDSHVHLISENSAISSEGYVLF 491
Query: 552 Y 552
Y
Sbjct: 492 Y 492
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ T + G + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH----TSSVHTGLMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S ++ L L +++ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAVRPKS---SHENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLRE-FASENT 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 167/389 (42%), Gaps = 92/389 (23%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD----- 257
GL N GN C+LNA LQ+L + PF + + R+ ++D D
Sbjct: 142 GLKNLGNTCYLNAILQSLSNIDPFCRYFKTFRS-----------------LTDSDPRKEK 184
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-----PR-----QEDA 307
++ N+ ++D R + E + + + PNS PR Q+DA
Sbjct: 185 HAHNTRAQGDNVCIVDELRKVLDGLGE--ISSSSYYSPNSFLTAICKLIPRFRGYHQQDA 242
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
EF+ +++D++H EL +++ G K S T F
Sbjct: 243 HEFMRYLLDRLHTELGRMRAP---------------------YYGNKQVSNTIVTTLFRG 281
Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE--------------AVHTIED 413
S L+++ + + N S FL L LDI SE ++ + D
Sbjct: 282 SLLNEV------NCLVCDIN--SRKTDSFLDLSLDIPSEFISRRNKSIGDNDISICKLTD 333
Query: 414 ALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
L F+ E LE Y SS + T K ++I+TL ++L LHL RF + S KL
Sbjct: 334 CLSSFTELEKLEDSELYYCSSCTKKQLST--KQLRIKTLPRVLCLHLKRFRWSSCIRKKL 391
Query: 471 HKSVRFPLQLVLGRD----LLVTPSAEGRK-YELVATVTHHGRDPSKGHYTADARYFNDQ 525
V FP+ +G D L + ++ GR Y+L+A V HHG GHYTA A + D
Sbjct: 392 DIYVEFPM---IGLDMKPYLTLKQTSNGRSMYDLIAVVEHHGSGYGSGHYTAYA--YKDG 446
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
W HF+D++V+ V+ +AY+LFY Q
Sbjct: 447 WYHFNDSTVSVAMEEHVIKCKAYILFYVQ 475
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 56 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 106
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 107 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 157
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 158 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 207
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 208 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 265
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 266 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 324
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 325 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 383
Query: 552 YK 553
Y+
Sbjct: 384 YE 385
>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
Length = 419
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 79 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 132
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 133 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 182
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 183 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 231
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 232 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 291
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 292 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 351
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 352 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 407
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 145/354 (40%), Gaps = 62/354 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C+ NA LQ L +P + L L R P +
Sbjct: 45 GLRNLGNTCYANAALQCLTYTAPLARCL--LSRRHAEACQRPASCVLCAMRAHV------ 96
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
++ + G P+ ++ F R +QEDA EFL F +D M
Sbjct: 97 -ARARRCR----GEVIQPAT--GLIAGFH---------RHKQEDAHEFLMFTVDAMQQAC 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ E E G + + + + IFGG +S V
Sbjct: 141 LR----------------------EPERRGRRCGDS---------TPIRRIFGGYWRSQV 169
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTA 440
K + + S T+ P+L + LDI +A ++ AL L PE L+G + G V A
Sbjct: 170 KCLRCHGVSDTLDPYLDITLDI--QAAQSVTQALELLVKPEKLDGDNSYHCGVCLEKVPA 227
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELV 500
K++ + S++LIL L RFS + +KL K V++P L + R L A +YEL
Sbjct: 228 SKTLTLHAPSEVLILVLKRFSDFT--GSKLAKEVQYPEHLDM-RQYLSQQDAGPLEYELY 284
Query: 501 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G GHY + N QW DDA VTA S L AYVLFY Q
Sbjct: 285 AVLVHAGGTCRSGHYFCYIKAGNGQWFKMDDAKVTACDVSSALSQDAYVLFYIQ 338
>gi|25152734|ref|NP_510570.2| Protein USP-33 [Caenorhabditis elegans]
gi|22265887|emb|CAB01885.2| Protein USP-33 [Caenorhabditis elegans]
Length = 716
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 163/420 (38%), Gaps = 92/420 (21%)
Query: 189 INEPVKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQEL--------RTRD 237
+ + + ++ L RGL+ N GN C++NA LQ L CSPF Q L EL + D
Sbjct: 166 VEQETRKMEPLAFRGLLGYLNFGNTCYMNAVLQLLGHCSPFTQYLIELIPPGGWSNCSHD 225
Query: 238 IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
IPK SDF P SP ++N P
Sbjct: 226 IPKTAIQMALDLRNMYSDFPLPY-----------------LSPWKIITCVRNEMPGFECF 268
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 357
+Q+DA EF+ ++D + D LK E N L+ + P+
Sbjct: 269 -----QQQDASEFMRNLLDIL-DRDLKTCSEYHRTN----TLIEMG--------NPEMDY 310
Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSE---------- 406
A+ +A+S IF G L++ ++ S T++ FL L + I E
Sbjct: 311 AIAMNAPHTKTAISAIFQGVLENQIQCHSCGFRSRTIENFLDLSIPIVGENEFEEMYASK 370
Query: 407 ----------------------AVH-------TIEDALRLFSAPENLEGYRTSSTGNAGV 437
VH ++E L F L+ S V
Sbjct: 371 KLDTPKAPCTSSNIEDGQDPGFLVHQGAFNKTSLESCLDRFFQNSTLQDDNQYSCSKCEV 430
Query: 438 -VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV-LGRDLLVTPSAEGR 495
V A KS K L +++I+ L RF + GS K+ K V FPL+ GR T S E
Sbjct: 431 LVDATKSTKAHRLPEVIIIQLKRFRHTMFGSCKVGKVVEFPLRSQDFGR---WTTSGEPA 487
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y+LV V H GR GHY + R+ D QW FDD VT ++V Q Y+L Y++
Sbjct: 488 LYDLVGFVVHEGRSLEFGHYVSYCRHEQDNQWYKFDDMVVTRCDATQVAKSQPYILMYRK 547
>gi|359494410|ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
vinifera]
Length = 906
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 155/370 (41%), Gaps = 73/370 (19%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
V ++ PRGL+N GN C+ NA LQ L P + LLQ +R + +
Sbjct: 373 VFNISPRGLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTCCVTNWCLMCEL----- 427
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+K + + + G P SPS + +++ + G QEDA EFL +
Sbjct: 428 ----------EKHVMMLRESGGPLSPSRILSHMRSINCQI-----GDGSQEDAHEFLRLL 472
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G G + A + +F+ F
Sbjct: 473 VTSMQSICLEKLG------------------------GEREVDARLQETTFI----QHTF 504
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+I+ V ++EDAL F+ PE+L+G YR
Sbjct: 505 GGRLRSKVKCLRCHLESERYENIMDLTLEIFG-WVESLEDALTQFTTPEDLDGENMYRCR 563
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL-VT 489
V A+K + I IL + L RF G G K++K + FP D+L +
Sbjct: 564 RC--TTYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFP-------DMLDMI 612
Query: 490 PSAEGRK-----YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKV 542
P G Y L A V H + GHY A + W DDA V + T++V
Sbjct: 613 PFMTGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQV 672
Query: 543 LHDQAYVLFY 552
+ + AY+LFY
Sbjct: 673 MSEGAYILFY 682
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 76 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 293
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 294 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 352
Query: 552 YK 553
Y+
Sbjct: 353 YE 354
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 148/371 (39%), Gaps = 64/371 (17%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGF 252
K V + P GL+N GN CF NA LQ L P L + + ++ I + G A
Sbjct: 30 KHVNKIGP-GLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHSKRITRDGQGKFDALKEV 88
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS---ISGR---PRQED 306
T S + + VLK ++ NS I R RQED
Sbjct: 89 ERHIITSSRCT--------------------QGVLK--PSNIVNSFRKIGARLRLGRQED 126
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EF +M+ MH A+ A E P +++A T
Sbjct: 127 AHEFTRLLMEAMHL--------------ADLAACRFTE-------SPYSRAAQT------ 159
Query: 367 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ IFGG L+S V+ + + S T FL L L+I + I DALRLF+ PE L+
Sbjct: 160 -GLVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLSLEI--KKADNITDALRLFTKPEILD 216
Query: 426 GYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLG 483
G + G T A K + +L LHL RF G S KL K V F L L
Sbjct: 217 GNNKYKCSHCGCKTRATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMFEQTLQLD 276
Query: 484 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 543
+ G +Y L V H G GHY A + N W DD SV + S V
Sbjct: 277 -PYMSEGEKAGSRYNLYGVVVHSGHSMKSGHYYAFVKNSNGVWYEMDDDSVRQVSYSAVA 335
Query: 544 HDQAYVLFYKQ 554
QAY+LFY Q
Sbjct: 336 RQQAYMLFYVQ 346
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 169/381 (44%), Gaps = 47/381 (12%)
Query: 184 VPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAG 242
VP ++N KS + L GL N GN CF+N+ LQ L + LQ L RD+
Sbjct: 15 VPRGSMNS--KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS 70
Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSIS 299
A V +F K I + P SPS F+ ++ + P
Sbjct: 71 ----NAHTALVEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-- 115
Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
Q+DAQEFL F++D +H+E+ ++ S N + +DE K +
Sbjct: 116 ---NQQDAQEFLRFLLDGLHNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMW 162
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDA 414
+ S + D+F GQLKS + +TV PF L L I Y E T+ D
Sbjct: 163 RKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDC 220
Query: 415 LRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
+RLF+ + L+G + + G K IQ KIL+LHL RFS ++KL
Sbjct: 221 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 280
Query: 474 VRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDA 532
V FPL+ + R+ + + Y L A H G GHYTA R +W F+D+
Sbjct: 281 VNFPLRDLDLRE-FASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDS 338
Query: 533 SVTAIGTSKVLHDQAYVLFYK 553
SVT + +S+V AY+LFY+
Sbjct: 339 SVTPMSSSQVRTSDAYLLFYE 359
>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
rubripes]
Length = 1082
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 155/375 (41%), Gaps = 71/375 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG---FVSDFDTP 259
GL N GN C++N+ LQ L + P LT + ++ D +
Sbjct: 751 GLRNLGNTCYMNSVLQCLCNA--------------------PALTEYFNNNYYMDDINRS 790
Query: 260 SGGSSKKKNISVLDIGRPFS---PSMFEAVLKNFTP--------DVPNSISGRPRQEDAQ 308
+ K D+ F +++ + K +P + SG Q+D+Q
Sbjct: 791 NILGHKG------DVAEEFGVIMKALWSGLYKCISPRDFKITIGKINEQFSGY-EQQDSQ 843
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLP 367
E L F+MD +H++L K N L D W N+S +
Sbjct: 844 ELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADVAWRKHKLLNESIIVA------ 897
Query: 368 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
+F GQ KS V+ ++ S T + F+ L L + S + +++D LRLFS E L
Sbjct: 898 -----LFQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKL-- 950
Query: 427 YRTSSTGNAGVVT--------AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
T N V + K ++I + IL++HL RFSY + KL SV FPL
Sbjct: 951 -----TDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPL 1005
Query: 479 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAI 537
+ ++ P ++Y L A H+G GHYTA + +W FDD V+ I
Sbjct: 1006 DSLDLAQYVIGPKQSLKRYSLYAVSNHYG-GLDGGHYTAYCKSALKQRWYKFDDHEVSDI 1064
Query: 538 GTSKVLHDQAYVLFY 552
TS V AY+LFY
Sbjct: 1065 STSSVKSSAAYILFY 1079
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSS----NAHTALMEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|348561662|ref|XP_003466631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Cavia
porcellus]
Length = 566
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 163/371 (43%), Gaps = 47/371 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 214 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 272
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 273 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 314
Query: 319 HDELLKLQGESTSI--NGANTALV----SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I NG +L +L EE E N K + R S
Sbjct: 315 HLEINRRGRRAPPILANGPVPSLPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 370
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 371 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 430
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
E T + K + +Q +IL+LHL RFS K V FPLQ L L
Sbjct: 431 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 490
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
G + A Y+L A H G GHYTA R W ++D+ V+ + ++V
Sbjct: 491 GD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQV 546
Query: 543 LHDQAYVLFYK 553
+ YVLFY+
Sbjct: 547 ASSEGYVLFYQ 557
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 76 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 293
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 294 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 352
Query: 552 YK 553
Y+
Sbjct: 353 YE 354
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSS----NAHTALMEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 879
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 150/357 (42%), Gaps = 63/357 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR-DIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + + AG+ L A VS
Sbjct: 96 GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCHVAGFCALCAIQNHVSR------ 149
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ GR SP L+ + + N+ RQEDA E++ +++ MH
Sbjct: 150 --------ALQSTGRILSPEDLVGNLRCISRNFRNA-----RQEDAHEYMVNLLECMHKC 196
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + + S E+ G KS V + IFGG+L+S
Sbjct: 197 CLP------------SGIPS-------ESPGAYEKSFVHK-----------IFGGRLRSQ 226
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L L+I+ +++ AL F+A E L+G Y
Sbjct: 227 VKCHQCSYCSNKFDPFLDLSLEIFK--ADSLQKALSNFTAAEWLDGGEKEYHCQRCKQK- 283
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 495
V A K + I +L +HL RF G K+ K ++F L L V+ S +G
Sbjct: 284 -VRALKQLTIHKAPYVLTIHLKRFHAHDPGQ-KIKKKIQFGCALDL--KPFVSGSYDGDV 339
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY L + H G GHY R N+ W DD V+ + +VL+ QAY+LFY
Sbjct: 340 KYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFY 396
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 155/364 (42%), Gaps = 74/364 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD------IPKAGYPTLTAFVGFVSDF 256
GL N GN CFLNATLQ + P L +LR+ D K G+ + A V +
Sbjct: 45 GLSNMGNTCFLNATLQCITHTVP---LFLKLRSTDHSTPCSYNKDGFCSFCALKEHVDE- 100
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
S+ G +P+ F L+ + D +QEDA EFL ++D
Sbjct: 101 -------------SIQRSGSVIAPAKFRDNLRKLSSDF-----WPGQQEDAHEFLRCLLD 142
Query: 317 QMH----DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
+H D + K +G S EE S +++
Sbjct: 143 NLHKCTLDPMSKGKGSS------------FDEE----------------------SIVNE 168
Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYR 428
IFGGQLKS + + +S T +PFL L L+I + V + DAL+ F+ E + E
Sbjct: 169 IFGGQLKSHLSCCECGHSSETFEPFLDLSLEI--DQVDHLVDALQSFTKVEQIGDSENKL 226
Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLV 488
T + NA V + K + + ++ HL RF+ K+ K V +PL++ L
Sbjct: 227 TCESCNAQV-SKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPLEVDLKPFHSN 285
Query: 489 TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAY 548
+ G KY+L V H G P+ GHYT R W +D+ V + S L+ +AY
Sbjct: 286 PDTVGGLKYDLYGVVEHSGL-PNYGHYTCTIRSSPSTWYFMNDSKVDSCTDSSALNQEAY 344
Query: 549 VLFY 552
+LFY
Sbjct: 345 ILFY 348
>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 903
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 150/357 (42%), Gaps = 63/357 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR-DIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + + AG+ L A VS
Sbjct: 99 GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCHVAGFCALCAIQNHVSR------ 152
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ GR +P L+ + + N+ RQEDA E++ +++ MH
Sbjct: 153 --------ALQSTGRILAPEDLVGNLRCISRNFRNA-----RQEDAHEYMVNLLECMHKC 199
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + + S E+ G KS V + IFGG+L+S
Sbjct: 200 CLP------------SGIPS-------ESPGAYEKSFVHK-----------IFGGRLRSQ 229
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L L+I+ +++ AL F+A E L+G Y
Sbjct: 230 VKCHQCSYCSNKFDPFLDLSLEIFK--ADSLQKALSNFTAAEWLDGGEKEYHCQRCKQK- 286
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 495
V A K + I +L +HL RF G K+ K V+F L L V+ S +G
Sbjct: 287 -VKALKQLTIHKAPYVLTIHLKRFHAHDTGQ-KIKKKVQFGCALDL--KPFVSGSNDGDV 342
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY L + H G GHY R N+ W DD V+ + +VL+ QAY+LFY
Sbjct: 343 KYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFY 399
>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
Length = 933
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 144/355 (40%), Gaps = 58/355 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + ++ AG+ L A VS
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSR------ 155
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ GR +P + L+ + + N+ RQEDA E++ +++ MH
Sbjct: 156 --------ALQSSGRILAPKDLVSNLRCISRNFRNA-----RQEDAHEYMVNLLESMHKC 202
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L L S S + +LV IFGG+L+S
Sbjct: 203 CLPLGLPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 232
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSSTGNAGVV 438
VK Q + S PFL L LDI +I A + F+ PE L+G + V
Sbjct: 233 VKCMQCSFCSNKFDPFLDLSLDIV--KADSIYKAFKNFTTPELLDGGERQYQCQQCKQKV 290
Query: 439 TAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
A K + +L +HL RF SY + K+HK + F L L + + + KY
Sbjct: 291 KALKQFTVHKAPYVLTIHLKRFQSYNLE--EKIHKKIHFGPTLDLAPFVSGSYADGDLKY 348
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L + HHG GHY R + W DD V+ +G V QAY+LFY
Sbjct: 349 TLYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFY 403
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 11 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 61
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 62 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 112
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 113 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 162
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 163 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 220
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 221 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 279
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 280 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 338
Query: 552 YK 553
Y+
Sbjct: 339 YE 340
>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 744
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 155/367 (42%), Gaps = 77/367 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDI--------PKAGYPTLTAFVGF 252
GL N GN C++N+ +QAL+ P F L QEL D+ P A + +TA F
Sbjct: 196 GLSNYGNTCYMNSVMQALVHTPPLAFALLTQEL---DVLHGEWGGKPNAAFDAVTAMHSF 252
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPF-SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
L RP +P F LK F + RQEDA E+L
Sbjct: 253 AK---------------RSLQGTRPTNAPQEFNRNLKAFAKPLRQG-----RQEDAHEYL 292
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
F+++ + L A SL +D R +F+
Sbjct: 293 RFLLEALQQSCLA------------RAPKSLKPDDP------------ARRTTFV----H 324
Query: 372 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---Y 427
FGG+L+S V S T PF+ L LD+ + ++++ DALR F A ++L G Y
Sbjct: 325 KTFGGKLRSRVMCHSCGHNSDTFDPFMDLSLDV-RKGINSLTDALRAFVAKDHLTGAEKY 383
Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDL 486
+ V A K I L +HL RF+ +G K+ + + F L + L
Sbjct: 384 KCDKCKRK--VDATKQFTIDAAPPALTVHLKRFTVFGG----KVSRQIAFDDMLNIAPYL 437
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 546
V +Y L ATV H+G P+ GHY A R + +W+ DD+ V +G S +DQ
Sbjct: 438 SVNNGPA--RYRLYATVHHYGSGPNSGHYVASVRSPSGKWMRMDDSHVAEMGRSGPTNDQ 495
Query: 547 -AYVLFY 552
AY+LFY
Sbjct: 496 SAYILFY 502
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 163/389 (41%), Gaps = 80/389 (20%)
Query: 201 PR--GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
PR GL N GN CF+NA LQ+L + F +++L P+L V V T
Sbjct: 117 PRSSGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQL----------PSLEEKVTKVKKIQT 166
Query: 259 PSGGSSKKKNISVLDIGRPF-----------SPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
+ ++ + V ++ + SP AV+ P +Q+DA
Sbjct: 167 RKSKTPEEDVLLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGY-----QQQDA 221
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
EF+ +++D++H ELL L+ D +GPK KS +
Sbjct: 222 HEFMRYLLDRLHTELL--------------TLLPYPNSDS-PFIGPKGKSTI-------- 258
Query: 368 SALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAV-------------HTIED 413
++ IFGG L++ V S PFL L LDI + T+ D
Sbjct: 259 --VTAIFGGLLQNEVTCLVCGVESKKHDPFLDLSLDIPQQFCTRGVKAKDGEQLRCTLSD 316
Query: 414 ALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
L+ F+ E LE Y S+ T K I+ L +L LH+ RF + S KL
Sbjct: 317 CLQSFTELEELEESELYMCSTCKKKQRST--KKFWIRRLPNVLCLHIKRFRWQSFFRVKL 374
Query: 471 HKSVRFPLQLVLGRDLLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADARYFN 523
V FPL+ + ++ E R +Y+L A V HHG GHYT+ AR+
Sbjct: 375 ETFVEFPLEGLNMHKYILDNLHETRGSGSGSNEYDLAAVVVHHGSGAGSGHYTSYARH-E 433
Query: 524 DQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
QW HF+D++VT V +AY+LFY
Sbjct: 434 GQWFHFNDSTVTPCEPETVAKCKAYILFY 462
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLTDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
Length = 673
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 333 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 386
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 387 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 436
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 437 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 485
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 486 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 545
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 546 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 605
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 606 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 661
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 173/399 (43%), Gaps = 46/399 (11%)
Query: 167 RDQNAAACNS-SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
RD + C + S+ +P + KS + L GL N GN CF+N+ LQ L +
Sbjct: 23 RDLGPSCCLAPSLCLQPHLPCVLCLQNSKSAQGLA--GLRNLGNTCFMNSILQCLSNTRE 80
Query: 226 FVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP---FSPS 281
LQ L RD+ + + +F K I + P SPS
Sbjct: 81 LRDYCLQRLYMRDLSHSS----NVHTALMEEF---------AKLIQTIWTSSPNDVVSPS 127
Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
F+ ++ + P Q+DAQEFL F++D +H+E+ ++ S N +
Sbjct: 128 EFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEVNRVTVRPKS----NPENLD 178
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLH 400
+DE K + + S + D+F GQLKS + +TV PF L
Sbjct: 179 HLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLS 232
Query: 401 LDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILIL 455
L I Y E T+ D +RLF+ + L+G + + K IQ KIL+L
Sbjct: 233 LPIAKRGYPEV--TLTDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVL 290
Query: 456 HLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHY 515
HL RFS ++KL V FPL+ + R+ + + Y L A H G GHY
Sbjct: 291 HLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHAVYNLYAVSNHSGTT-MGGHY 348
Query: 516 TADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
TA R +W F+D+SVT + +S+V AY+LFY+
Sbjct: 349 TAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 387
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 147/365 (40%), Gaps = 77/365 (21%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P + L+ + + + K+ G+ + A G V + G
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVKNALQSWG 62
Query: 262 G------SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
+ N S I R F P RQEDA EFL ++M
Sbjct: 63 KVIAPNHMISRVNYSNAGISRAFQPW---------------------RQEDAHEFLRYLM 101
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
+ + + L + T + S +E + L IFG
Sbjct: 102 EALQKDCLP----------SKTPMNSPEQE---------------------KTLLYKIFG 130
Query: 376 GQLKSVVKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
G+L+S VK + S TV PFL L LDI ++ AL F+A E L+G Y
Sbjct: 131 GRLRSQVKCSNCLERSETVDPFLDLSLDI--TRADSLGKALAWFTANEILDGDNKYHCEK 188
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP- 490
V A K I+T +L + RFS K+ K V F GR L +TP
Sbjct: 189 CKKK--VRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHF------GRKLDITPF 240
Query: 491 ---SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
+ +G Y+L + H G GHY R +D W DD+ V + VL+ +A
Sbjct: 241 MSNARDGAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKA 300
Query: 548 YVLFY 552
Y+LFY
Sbjct: 301 YILFY 305
>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Felis catus]
gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Felis catus]
gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Felis catus]
Length = 566
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 165/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 214 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 272
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 273 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 314
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I + A +L EE E N K + R S
Sbjct: 315 HLEINRRGRRAAPILASGAAASQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 370
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 371 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 430
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 431 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 489
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 490 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 545
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 546 VASSEGYVLFYQ 557
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGS----SVHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSPSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 147/365 (40%), Gaps = 77/365 (21%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P + L+ + + + K+ G+ + A G V + G
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVRNALQSWG 62
Query: 262 G------SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
+ N S I R F P RQEDA EFL ++M
Sbjct: 63 KVIAPNHMISRVNYSNAGISRAFQPW---------------------RQEDAHEFLRYLM 101
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
+ + + L + T + S +E + L IFG
Sbjct: 102 EALQKDCLP----------SKTPMNSPEQE---------------------KTLLYKIFG 130
Query: 376 GQLKSVVKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
G+L+S VK + S TV PFL L LDI ++ AL F+A E L+G Y
Sbjct: 131 GRLRSQVKCSNCLERSETVDPFLDLSLDI--TRADSLGKALAWFTANEILDGDNKYHCEK 188
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP- 490
V A K I+T +L + RFS K+ K V F GR L +TP
Sbjct: 189 CKKK--VRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHF------GRKLDITPF 240
Query: 491 ---SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
+ +G Y+L + H G GHY R +D W DD+ V + VL+ +A
Sbjct: 241 MSNARDGAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKA 300
Query: 548 YVLFY 552
Y+LFY
Sbjct: 301 YILFY 305
>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
Length = 926
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 158/367 (43%), Gaps = 67/367 (18%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 436 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 494
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 495 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 535
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G T ++ P+ + + + +F
Sbjct: 536 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 567
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 568 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 626
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
AG V A+K + I IL + L RF G G K++K + FP L D++
Sbjct: 627 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML----DMIPFM 678
Query: 491 SAEGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
+ G Y L A + H + GHY + + W DD+ + + ++V+ +
Sbjct: 679 TRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHRVPMTQVMSE 738
Query: 546 QAYVLFY 552
AY+LFY
Sbjct: 739 GAYMLFY 745
>gi|345797847|ref|XP_536136.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Canis lupus
familiaris]
Length = 565
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPAQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
griseus]
Length = 1079
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 155/360 (43%), Gaps = 35/360 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 739 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 792
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 793 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 842
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 843 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 891
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 892 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 951
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + +K
Sbjct: 952 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1011
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY V
Sbjct: 1012 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYTSV 1070
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 165/377 (43%), Gaps = 60/377 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334
Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394
Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ--- 479
L N G + K I L +L LH+ RF + + +K+ V FP++
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLD 454
Query: 480 ----LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
V G + ++ Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 455 MSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSVR 513
Query: 536 AIGTSKVLHDQAYVLFY 552
T V + Y+LFY
Sbjct: 514 PATTDAVAKCKPYILFY 530
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 158/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 37 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 87
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 88 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 138
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 139 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 188
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + +TV PF L L I Y E T+ D +RLF+ + L+G +
Sbjct: 189 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDAAPTCC 246
Query: 434 NAGVVTAK-KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 247 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 305
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 306 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 364
Query: 552 YK 553
Y+
Sbjct: 365 YE 366
>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
Length = 1075
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 155/360 (43%), Gaps = 35/360 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 735 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 788
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 789 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 838
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 839 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 887
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 888 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 947
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + +K
Sbjct: 948 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1007
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY V
Sbjct: 1008 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYTSV 1066
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 165/377 (43%), Gaps = 60/377 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 247
Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 302
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 303 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 335
Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 336 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 395
Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ--- 479
L N G + K I L +L LH+ RF + + +K+ V FP++
Sbjct: 396 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLD 455
Query: 480 ----LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
V G + ++ Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 456 MSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSVR 514
Query: 536 AIGTSKVLHDQAYVLFY 552
T V + Y+LFY
Sbjct: 515 PATTDAVAKCKPYILFY 531
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 163/378 (43%), Gaps = 62/378 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334
Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394
Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
L N G + K I L +L LH+ RF + + +K+ V FP++ L
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK-SL 453
Query: 483 GRDLLVTPSAEGRK--------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
G K Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 454 DMSAFTVRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSV 512
Query: 535 TAIGTSKVLHDQAYVLFY 552
T V + Y+LFY
Sbjct: 513 RPATTDAVAKCKPYILFY 530
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 163/378 (43%), Gaps = 62/378 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334
Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394
Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
L N G + K I L +L LH+ RF + + +K+ V FP++ L
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK-SL 453
Query: 483 GRDLLVTPSAEGRK--------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
G K Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 454 DMSAFTVRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSV 512
Query: 535 TAIGTSKVLHDQAYVLFY 552
T V + Y+LFY
Sbjct: 513 RPATTDAVAKCKPYILFY 530
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 161 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|297787764|pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
gi|297787766|pdb|3MTN|C Chain C, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
Length = 373
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 170/383 (44%), Gaps = 57/383 (14%)
Query: 199 LLPRG------LINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-A 248
L+PRG L N GN CFLNA LQ L S P L ++ R +++P G LT A
Sbjct: 14 LVPRGSSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEA 72
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
F + P D +P+ F AV + + P S SG Q+DAQ
Sbjct: 73 FADVIGALWHP-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQ 114
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSA 358
EFL +M+++H E+ + +G AN + S L EE E N K
Sbjct: 115 EFLKLLMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRY 173
Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIED 413
+ R S + D+F GQLKS +K Q S T + F L L I ++ ++ D
Sbjct: 174 LERED----SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRD 229
Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
LF+ E LE T + K + +Q +IL+LHL RFS S+GS K
Sbjct: 230 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSS 288
Query: 473 -SVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 530
V FPLQ L LG + A Y+L A H G GHYTA R W ++
Sbjct: 289 VGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYN 344
Query: 531 DASVTAIGTSKVLHDQAYVLFYK 553
D+ V+ + ++V + YVLFY+
Sbjct: 345 DSRVSPVSENQVASSEGYVLFYQ 367
>gi|254575047|pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575048|pdb|3I3T|C Chain C, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575049|pdb|3I3T|E Chain E, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575050|pdb|3I3T|G Chain G, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
Length = 355
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 5 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 63
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 64 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 105
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 106 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 160
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 161 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 220
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 221 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 279
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 280 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 335
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 336 QVASSEGYVLFYQ 348
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 162/394 (41%), Gaps = 83/394 (21%)
Query: 176 SSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT 235
+S S S E+P + PRGL N GN CF+NA LQAL F + + L
Sbjct: 208 ASSSSSTEIPYR-------------PRGLRNLGNTCFMNAVLQALACIKDFREYILNL-- 252
Query: 236 RDIPKAGYPTLTAFV----------GFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEA 285
P+L +V F++D S +N P SP+ F
Sbjct: 253 --------PSLEDYVEDEKIAQNGNCFLTDEYQKLLASMSARNFR-----DPTSPNEFRE 299
Query: 286 VLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE 345
+ P RQ D+ EFL +++DQMH E+ K + +L E
Sbjct: 300 AFVSACPRFRGF-----RQHDSHEFLRYLLDQMHTEMRKCR--------------NLPE- 339
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDI- 403
P +K+ + +S F G L+S V Q + S + F+ L LD+
Sbjct: 340 ------MPDDKT----------TPISKSFEGTLQSSVICQTCRNVSNKMDDFMDLSLDVP 383
Query: 404 -YSEAVHTIEDALRLFSAPENLE-GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
S+A + + D L LF E LE G + + T K + I+ L ++L LH+ RF
Sbjct: 384 RVSKARYRLSDCLDLFFQRELLEKGEKPECSKCKSKQTCSKQMFIKKLPEVLCLHIKRF- 442
Query: 462 YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-YELVATVTHHGRDPSKGHYTADAR 520
K+ + FPL + D L S E YEL + + H G S GHY A R
Sbjct: 443 --RDNGGKIDTLIEFPLTGLSVDDFLTEDSDEPPCVYELHSIIVHIGYGCSSGHYIAFGR 500
Query: 521 YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
+W FDD V A+ TS + +AYVL Y +
Sbjct: 501 R-GAKWYQFDDTVVKAMETSNITKQRAYVLMYTK 533
>gi|340375672|ref|XP_003386358.1| PREDICTED: hypothetical protein LOC100638851 [Amphimedon
queenslandica]
Length = 1002
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 158/364 (43%), Gaps = 44/364 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL NS N C+LNA LQ + + + P + A+ F+ D P
Sbjct: 663 GLKNSKNSCYLNAVLQCVSHTTKLTDYFLSGEAKKEPGYSSKIIGAYNSFLKDMWMP--- 719
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
K+ +VL P A L TP + I QEDAQEFL +++ +HD +
Sbjct: 720 --KENTKAVL-------PRRIRAAL---TPSI--DILQENGQEDAQEFLQYLLPCLHDHI 765
Query: 323 LK--LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
K L T N L+S+ V + F+ S S++F GQ KS
Sbjct: 766 NKPPLDSPRTKALKRNNGLISITP-------------PVPISSEFMKSCFSELFMGQTKS 812
Query: 381 VVKA-QGNKASATVQPFLLLHLDI-----YSEAVH-TIEDALRLFSAPENLEGYRTSSTG 433
+ + ++ S++V+ F L L + +S+ V T+ D RLF+A E L
Sbjct: 813 SLTCHKCSRTSSSVESFWNLSLPLPTKGLFSKYVSFTLSDCFRLFAAEEKLIKENRPRCS 872
Query: 434 NAGVVTA-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G + K +++Q + ILHL RFS+ KL +V+ P L + SA
Sbjct: 873 KCGTLQNFSKKLEVQKFPESFILHLKRFSFQDGHLVKLTSAVKVPTTLSVKEIAADKESA 932
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL--HDQAYVL 550
+ YEL V HH GHY AD ++ N +W +F+D V+ T+++ Y+L
Sbjct: 933 KSFYYELYG-VIHHSGYLDGGHYQADCKH-NGKWYNFNDDIVSKKSTAEITVPSSSPYLL 990
Query: 551 FYKQ 554
FY++
Sbjct: 991 FYEK 994
>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
Specific Inhibitor
Length = 396
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 64 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 117
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 118 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 167
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 168 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 216
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 217 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 276
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 277 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 336
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 337 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 392
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 161/370 (43%), Gaps = 59/370 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T A + +F
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 326
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 377
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
H+E+ N V E P ++ + +L S + D+F
Sbjct: 378 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 424
Query: 376 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG---- 426
GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 425 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 482
Query: 427 --YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
YR + K +Q KIL+LHL RFS ++KL V FPL+ + R
Sbjct: 483 TCYRCRARKRC-----IKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLR 537
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVL 543
+ + + Y L A H G GHYTA R +W F+D+SVT + +S+V
Sbjct: 538 E-FASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVR 595
Query: 544 HDQAYVLFYK 553
AY+LFY+
Sbjct: 596 TSDAYLLFYE 605
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + + +V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSRQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|374073975|pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073977|pdb|2Y5B|E Chain E, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 370
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 18 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 76
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 77 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 118
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 119 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 173
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 174 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 233
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 234 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 292
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 293 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 348
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 349 QVASSEGYVLFYQ 361
>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 924
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 157/368 (42%), Gaps = 69/368 (18%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 432 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 490
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 491 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 531
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G T ++ P+ + + + +F
Sbjct: 532 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 563
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 564 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 622
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 486
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 623 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 678
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLH 544
V P Y L A + H + GHY + + W DD+ + + ++V+
Sbjct: 679 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS 733
Query: 545 DQAYVLFY 552
+ AY+LFY
Sbjct: 734 EGAYMLFY 741
>gi|301786749|ref|XP_002928787.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Ailuropoda melanoleuca]
gi|281352153|gb|EFB27737.1| hypothetical protein PANDA_018837 [Ailuropoda melanoleuca]
Length = 565
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE + N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSAAPCQPRRGGALLEEPDLSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
Length = 1081
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 154/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 741 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 794
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 795 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 844
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 845 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 893
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 894 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 953
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + +K
Sbjct: 954 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1013
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1014 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1069
>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 928
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 157/368 (42%), Gaps = 69/368 (18%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 436 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 494
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 495 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 535
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G T ++ P+ + + + +F
Sbjct: 536 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 567
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 568 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 626
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 486
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 627 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 682
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLH 544
V P Y L A + H + GHY + + W DD+ + + ++V+
Sbjct: 683 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS 737
Query: 545 DQAYVLFY 552
+ AY+LFY
Sbjct: 738 EGAYMLFY 745
>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 225 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 278
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 279 IIMK-----ALWTGQYRYISPKDFKITVGK----INDQFAGYS-QQDSQELLLFLMDGLH 328
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 329 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 377
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 378 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 437
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 438 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 497
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 498 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 553
>gi|355727944|gb|AES09362.1| ubiquitin specific peptidase 21 [Mustela putorius furo]
Length = 592
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 240 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 298
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 299 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 340
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 341 HLEINRRGRRAPPILASSPAPSQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 396
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 397 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 456
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 457 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 515
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 516 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 571
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 572 VASSEGYVLFYQ 583
>gi|60552608|gb|AAH90946.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|48257066|gb|AAH03130.2| USP21 protein, partial [Homo sapiens]
Length = 477
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 125 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 183
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 184 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 225
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 226 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 280
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 281 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 340
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 341 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 399
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 400 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 455
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 456 QVASSEGYVLFYQ 468
>gi|350583234|ref|XP_003481465.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sus scrofa]
Length = 610
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 258 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 316
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 317 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 358
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 359 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 414
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 415 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 474
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 475 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 533
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 534 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 589
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 590 VASSEGYVLFYQ 601
>gi|62243586|ref|NP_001014443.1| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|74027267|ref|NP_036607.3| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|10720334|sp|Q9UK80.1|UBP21_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853113|gb|AAD54321.1|AF177758_1 ubiquitin specific protease 16 [Homo sapiens]
gi|119573029|gb|EAW52644.1| ubiquitin specific peptidase 21, isoform CRA_c [Homo sapiens]
gi|158258070|dbj|BAF85008.1| unnamed protein product [Homo sapiens]
gi|223460370|gb|AAI36292.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|355558658|gb|EHH15438.1| hypothetical protein EGK_01528 [Macaca mulatta]
gi|355745834|gb|EHH50459.1| hypothetical protein EGM_01292 [Macaca fascicularis]
gi|380811730|gb|AFE77740.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|383417519|gb|AFH31973.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|384946444|gb|AFI36827.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|410219870|gb|JAA07154.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410219872|gb|JAA07155.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410302294|gb|JAA29747.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410351841|gb|JAA42524.1| ubiquitin specific peptidase 21 [Pan troglodytes]
Length = 565
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|297280506|ref|XP_001117779.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 6
[Macaca mulatta]
Length = 595
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 243 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 301
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 302 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 343
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 344 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 398
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 399 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 458
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 459 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 517
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 518 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 573
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 574 QVASSEGYVLFYQ 586
>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 63/367 (17%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
V +L PRGL+N GN C+ NA LQ L P + LL+ +R + + V
Sbjct: 345 VINLTPRGLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSRACCGKDWCLMCELEQHV- 403
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P SPS ++ + G QEDA EFL +
Sbjct: 404 --------------MMLRECGGPLSPSRILLHMRKINCQI-----GDGSQEDAHEFLRLL 444
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M + L L ED+ V P+ + + + F
Sbjct: 445 IASMQ----------------SICLERLGGEDK---VDPRLQET---------TFIQHTF 476
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG L+S VK + + S + + L L+I+ V ++EDAL F+ PE L+G G
Sbjct: 477 GGLLRSKVKCLRCHHESERYENIMDLTLEIFG-WVESLEDALTQFTTPEELDGENMYRCG 535
Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
A V A+K + I IL + L RF G G K++K + FP L D++ +
Sbjct: 536 RCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYG--KINKCITFPDML----DMIPFMTG 589
Query: 493 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y L A V H + GHY A + W DD V + S+V+ + A
Sbjct: 590 MGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVSMSQVMLEGA 649
Query: 548 YVLFYKQ 554
Y+LFYK+
Sbjct: 650 YILFYKR 656
>gi|194036892|ref|XP_001927817.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Sus
scrofa]
Length = 565
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 151/357 (42%), Gaps = 66/357 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+TLQ L P + L T+ G+ + ++ S
Sbjct: 108 GLQNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSN 167
Query: 262 GSSKKKNI--SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ K ++ + IG+ F F + QEDA EFL F +D +
Sbjct: 168 NAIKPTSVINGLKRIGKHF---HFGS------------------QEDAHEFLCFTVDALQ 206
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L ST ++ ++ A + + IFGG L+
Sbjct: 207 KACL---NGSTKLDRSSQATTLIYQ----------------------------IFGGYLR 235
Query: 380 SVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
S VK KA S T +PFL + LDI +AV ++ AL F PE L+G Y+ S
Sbjct: 236 SRVKCLNCKAVSDTYEPFLDVTLDI--KAVTSVTRALEQFVKPEQLDGENSYKCSKCKK- 292
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
+V A K I S +L + L RF+ + G K++K V++P L L R + E
Sbjct: 293 -MVPASKRYTIHRSSNVLTISLKRFANFTGG--KINKDVKYPEYLDL-RAYMSQSIGEPL 348
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + + GHY + N W +DASV VL+ QAYVLFY
Sbjct: 349 IYALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFY 405
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 168/369 (45%), Gaps = 59/369 (15%)
Query: 213 LNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNI 269
+NA LQ+L + F +EL R+ AG T + T S G + N+
Sbjct: 1 MNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTRSQGDN---NV 47
Query: 270 SVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEFLSFIMDQMHD 320
S+++ R ++++ F+P+ +PN G +Q+DA EF+ +++D +H
Sbjct: 48 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEFMRYLLDHLH- 104
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+LQG NG + + ++ +E+ T+ NK + + ++ IFGG L++
Sbjct: 105 --LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA----STVVTAIFGGILQN 151
Query: 381 VVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENL-EG 426
V S PFL L LDI S+ V + D LR F+ E L E
Sbjct: 152 EVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCWVRDCLRSFTDLEELDET 211
Query: 427 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
+ K IQ L K+L LHL RF + + K+ V FPL+ + +
Sbjct: 212 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 271
Query: 487 LVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 543
L+ P G + Y+L A V HHG GHYTA A + +W HF+D++VT V+
Sbjct: 272 LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVV 330
Query: 544 HDQAYVLFY 552
+AY+LFY
Sbjct: 331 KAKAYILFY 339
>gi|328698286|ref|XP_001952840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Acyrthosiphon pisum]
Length = 385
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 166/369 (44%), Gaps = 47/369 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + E + R+ K TL + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFRDKVLEYKARN--KRNKETLLTCLA-----DLFHSI 77
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + + +P F L+ + N + Q+DA EFL+F+++ + +E+
Sbjct: 78 ATQKKKVGSI------APKKFINRLRKEKEEFNNYM-----QQDAHEFLNFLINHI-NEI 125
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + T+ NG + ++ + E T + S+ + P+ + +IF G L S
Sbjct: 126 ILSERNQTNCNGKSKSITPNIVDGESTTSSITSSSSHNQD----PTWVHEIFQGILTSET 181
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVTA 440
+ + S+ + F L +DI +I LR FS E L N A
Sbjct: 182 RCLNCEEVSSKDEDFFDLQVDIDQNT--SITHCLRCFSNTEMLCSDNKFKCDNCCSYQEA 239
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 240 QKCMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RM 296
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y LVA V H G P++GHY + + +D WL FDD V I S +
Sbjct: 297 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDMVDKIDQSAIEDFYGLTSDLQKSS 355
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 356 ETGYILFYQ 364
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 155/379 (40%), Gaps = 66/379 (17%)
Query: 183 EVPMKAINEPVK-----SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTR 236
E+P K + P + + + GL N GN CFLN+ LQ L +PF +L ++
Sbjct: 59 EIPQKVLFPPERIYLKWTQVHRIGAGLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSK 118
Query: 237 DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
+ G+ + + SG K I VL+ + + K+F
Sbjct: 119 TCHEPGFCMMCTMQNHIIQVFANSGNVIKP--IGVLN--------ELKRIAKHFRYGS-- 166
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
QEDA EFL + +D M L P K
Sbjct: 167 -------QEDAHEFLRYTVDAMQKSCL-----------------------------PGTK 190
Query: 357 -SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDA 414
T+ +F+ +FGG L+S VK KA S T PFL + L+I + ++ A
Sbjct: 191 LDRQTQATTFI----HQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEI--KTAPSVSKA 244
Query: 415 LRLFSAPENLEGYRT-SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
L F PE L+G T +VTA K I + +L L L RF+ S G K+ K
Sbjct: 245 LEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGG--KITKD 302
Query: 474 VRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 533
V++P L L R + E + Y L A + H G GHY + N QW +D+S
Sbjct: 303 VKYPEYLDL-RPFMSQSQGEPQVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSS 361
Query: 534 VTAIGTSKVLHDQAYVLFY 552
V+ VL+ QAYVLFY
Sbjct: 362 VSISDIRSVLNQQAYVLFY 380
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+ F
Sbjct: 328 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
Length = 891
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 158/367 (43%), Gaps = 67/367 (18%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 399 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 457
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 458 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 498
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G T ++ P+ + + + +F
Sbjct: 499 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 530
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 531 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 589
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
AG V A+K + I IL + L RF G G K++K + FP L D++
Sbjct: 590 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML----DMIPFM 641
Query: 491 SAEGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
+ G Y L A + H + GHY + + W DD+ + + ++V+ +
Sbjct: 642 TRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSE 701
Query: 546 QAYVLFY 552
AY+LFY
Sbjct: 702 GAYMLFY 708
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 265 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 315
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + I + SPS F+ ++ + P Q+DAQEFL F++D +H
Sbjct: 316 -AKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLH-- 367
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQL 378
N N V E P ++ + +L S + D+F GQL
Sbjct: 368 -----------NAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQL 416
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 417 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 474
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 475 RCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASETT 533
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT++ +S+V AY+LF
Sbjct: 534 NHAVYNLYAVSNHSGTT-VGGHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLF 592
Query: 552 YK 553
Y+
Sbjct: 593 YE 594
>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
Length = 487
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 147 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 200
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 201 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 250
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 251 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 299
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 300 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 359
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 360 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 419
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 420 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 475
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 154/359 (42%), Gaps = 70/359 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG D+ +P +N T S + +QEDA EFL F ++ MH
Sbjct: 112 SG-----------DVMKPS---------QNLT-----SAFHKRKQEDAHEFLMFTLETMH 146
Query: 320 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ L++ Q E TS ED S + DIFGG
Sbjct: 147 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 173
Query: 378 LKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
+S +K + S + PFL + LDI S V +++ AL+ E L G + G
Sbjct: 174 WRSQIKCHHCQGTSYSYDPFLDIPLDISS--VQSVKQALQDTEKAEELCGENSYYCGRCR 231
Query: 437 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
A K++K+ + K+L+L L RFS GS G KL + V +P L L + L P+
Sbjct: 232 QKKPASKTLKLYSAPKVLMLVLKRFS-GSMGK-KLDRKVSYPEFLDL-KPYLSQPTGGPL 288
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G GHY + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 289 PYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|296489875|tpg|DAA31988.1| TPA: ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|440893879|gb|ELR46495.1| Ubiquitin carboxyl-terminal hydrolase 21 [Bos grunniens mutus]
Length = 565
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|74218724|dbj|BAE25218.1| unnamed protein product [Mus musculus]
Length = 988
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 648 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 701
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 702 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 751
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 752 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 800
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 801 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 860
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 861 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 920
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 921 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 976
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 163/377 (43%), Gaps = 60/377 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMN 247
Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 302
Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 303 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 335
Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 336 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLSRFFKVEE 395
Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ--- 479
L N G + K I L +L LH+ RF + + +K+ V FP++
Sbjct: 396 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLD 455
Query: 480 ----LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
V G ++ Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 456 MSAFTVRGMTGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSVR 514
Query: 536 AIGTSKVLHDQAYVLFY 552
T V + Y+LFY
Sbjct: 515 PATTDAVAKCKPYILFY 531
>gi|366987127|ref|XP_003673330.1| hypothetical protein NCAS_0A03840 [Naumovozyma castellii CBS 4309]
gi|342299193|emb|CCC66942.1| hypothetical protein NCAS_0A03840 [Naumovozyma castellii CBS 4309]
Length = 917
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 146/329 (44%), Gaps = 81/329 (24%)
Query: 303 RQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALVSL----------- 342
RQEDA+EFL+ ++DQ+H+EL+ ++Q SIN + + +
Sbjct: 591 RQEDAEEFLTHLLDQLHEELVSSIDCLTDNEIQNLLQSINDESLKIFIVRNLPRYKKADF 650
Query: 343 ----------------------AEEDEWETVGPKNK------SAVTRTQSFLPSALSDIF 374
+ ++EW V +K +A RT +PS +S++F
Sbjct: 651 ITNISPKLKELINKYGAANDDTSSDNEWFEVSGSSKKGKKNKTAAKRTVEVIPSPISNLF 710
Query: 375 GGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
GGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L +RTS
Sbjct: 711 GGQFRSVLDIPNNKESQSITLDPFQTIQLDISDPKVNDLESAFKQFSEYE-LLPFRTS-- 767
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS---------VRFPLQLVLG 483
N V AKK I L ++L++ L RF++ + + + S + +++ G
Sbjct: 768 -NGTDVEAKKQTFIDKLPRVLLIQLKRFAFVTNSNKDSNMSNYNAYSGRIEKIRKKIIYG 826
Query: 484 RDLLVTPSA---------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 533
DL + + R+Y+L + HHG P GHYTAD + ++W DD +
Sbjct: 827 HDLTIPIESVSSTSLRDDANREYKLTGVIYHHGSSPDGGHYTADVFHQQTNKWYRIDDVN 886
Query: 534 VTAIGTSKVLH--------DQAYVLFYKQ 554
++ + VL AY+L Y++
Sbjct: 887 ISELKNDHVLDADDNDMGTRTAYILIYEK 915
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPT---LTAFVG 251
+K ++PRG++N N+CF+++ LQ L+ C PF+ +L + TR++ + G + L A V
Sbjct: 424 IKSIIPRGIVNMANICFMSSVLQVLLYCKPFIDILNVISTRNMYSRVGVSSSRLLDACVN 483
Query: 252 FVSDFD 257
FD
Sbjct: 484 LYKQFD 489
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 149/360 (41%), Gaps = 73/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+TLQ L +P +L ++ + G+ + + SG
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 262 GSSKKKNISVLD----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
K ISVL+ IG+ F F + QEDA EFL + +D
Sbjct: 144 NVIKP--ISVLNELKRIGKHF---RFGS------------------QEDAHEFLRYTVDA 180
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGG 376
M L P NK T+ +F+ IFGG
Sbjct: 181 MQKSCL-----------------------------PGNKLDRQTQATTFV----HQIFGG 207
Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
L+S VK KA S T P+L + L+I + T+ A F PE L+G Y+ S
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTLSKAFEQFVKPEQLDGDNAYKCSKC 265
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+VTA K + S +L + L RF+ + G K+ K VR+ L L R +
Sbjct: 266 --KKMVTASKRFTVHRSSNVLTISLKRFTNFNGG--KITKDVRYAEHLDL-RPFMSQSHG 320
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
E + Y L A + H G GHY + N QW +D+SV+ VL+ QAY+LFY
Sbjct: 321 EPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFY 380
>gi|313231914|emb|CBY09026.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 171/382 (44%), Gaps = 75/382 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GLIN GN C+ N+ LQAL C PF + + E R K T + + ++D
Sbjct: 28 GLINFGNTCYCNSVLQALYFCEPFRERVLEYR-----KQSKKTDGSLIWCLADLFNQLAA 82
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM----DQM 318
K++ P P+ F +LK N + Q DAQEFL+F++ D +
Sbjct: 83 KKKRQ---------PIKPTKFVHMLKKENDAFDNVL-----QHDAQEFLNFLLNHIGDTL 128
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
DE+++ Q VS + D + P + + + + ++F G +
Sbjct: 129 RDEIVRNQK------------VSQTQSDTHQHNSPCD---------YQETWVHELFEGVM 167
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAG 436
+V + + + + FL L +DI E +I L+ FSA E L+G ++
Sbjct: 168 TNVTRCLRCESVNQKDERFLDLSVDI--EPNTSINHCLKSFSATETLKGEHKYYCEVCCS 225
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
A KS++I++ K+L LHL RF + + + H + + ++V R L + PS++ K
Sbjct: 226 KQEAHKSLEIRSFPKVLALHLKRFRF--EDGVRSHMT-KLSYRVVFSRQLRI-PSSKYSK 281
Query: 497 -------YELVATVTHHGRDPSKGHYTADARYF--NDQWLHFDDASVTAIGTSKVLH--- 544
YEL A V H G++ ++GHY R +DQWL FDD V + +++
Sbjct: 282 DDGSTILYELNAVVVHCGKEINRGHYITLVRAHPSHDQWLVFDDEEVDFLPQAELEAFFG 341
Query: 545 -----------DQAYVLFYKQV 555
+ AY+LFY++V
Sbjct: 342 LTESSAGRGNLESAYILFYERV 363
>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
Length = 1091
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 751 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 804
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 805 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 854
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 855 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 903
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 904 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 963
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 964 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1023
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1024 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1079
>gi|149759807|ref|XP_001503883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Equus caballus]
gi|149759809|ref|XP_001503880.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Equus caballus]
Length = 565
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN+ S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSIGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
Length = 1119
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 779 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 832
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 833 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 882
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 883 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 931
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 932 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 991
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 992 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1051
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1052 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1107
>gi|74137217|dbj|BAE21996.1| unnamed protein product [Mus musculus]
Length = 1080
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 892
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|126277553|ref|XP_001370028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Monodelphis
domestica]
Length = 1102
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 762 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 815
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + SG Q+D+QE L F+MD +H
Sbjct: 816 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 865
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 866 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 914
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 915 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 974
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 975 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDLSQYVIGPKNNLKR 1034
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1035 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1090
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 149/360 (41%), Gaps = 73/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+TLQ L +P +L ++ + G+ + + SG
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 262 GSSKKKNISVLD----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
K ISVL+ IG+ F F + QEDA EFL + +D
Sbjct: 144 NVIKP--ISVLNELKRIGKHF---RFGS------------------QEDAHEFLRYTVDA 180
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGG 376
M L P NK T+ +F+ IFGG
Sbjct: 181 MQKSCL-----------------------------PGNKLDRQTQATTFV----HQIFGG 207
Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
L+S VK KA S T P+L + L+I + T+ A F PE L+G Y+ S
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTLSKAFEQFVKPEQLDGDNAYKCSKC 265
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+VTA K + S +L + L RF+ + G K+ K VR+ L L R +
Sbjct: 266 --KKMVTASKRFTVHRSSNVLTISLKRFTNFNGG--KITKDVRYAEHLDL-RPFMSQSHG 320
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
E + Y L A + H G GHY + N QW +D+SV+ VL+ QAY+LFY
Sbjct: 321 EPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFY 380
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 152/359 (42%), Gaps = 38/359 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI--PKAGYPTLTAFVGFVSDFDTP 259
GL N GN CF+N+ LQ L + LQ RD+ K + F + T
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKKCNTAIMEEFARLLQAIWTS 106
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
S SPS F+ ++ + P Q+DAQEFL F++D +H
Sbjct: 107 SANEV-------------VSPSEFKTQIQKYAPRFMGY-----NQQDAQEFLRFLLDGLH 148
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+E +N +++ + K K R S + ++F GQLK
Sbjct: 149 NE----------VNRVTVKPRPSSQDLDHMPDSEKGKHMWKRYLEREDSRIVELFVGQLK 198
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE--DALRLFSAPENLEG-YRTSSTGNA 435
S + + S PF L L I ++ + D +RLF+ + L+G + +
Sbjct: 199 SSLTCTECGYCSTVFDPFWDLSLPIAKKSASEVSLVDCMRLFTKEDVLDGDEKPTCCRCK 258
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
K IQ KIL+LHL RFS G S KL V FPL+ + R+ + S
Sbjct: 259 ARRRCTKKFTIQKFPKILVLHLKRFSEGRIRSGKLSTFVNFPLKDLDLRE-FSSESNPHA 317
Query: 496 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H G GHYTA + N +W F+D+ VTA+ +++V AYVLFY+
Sbjct: 318 TYNLYAVSNHSG-TTMGGHYTAYCKNPSNGEWYTFNDSRVTAMSSNQVRSSDAYVLFYE 375
>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 169/390 (43%), Gaps = 69/390 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++NAT+Q L + PF + E R R A V ++ T
Sbjct: 1049 GLRNLGNTCYMNATMQCLSATVPFARFFTEGRWR-----------AAVNMMNKMGTKGAI 1097
Query: 263 SSKKKNISVLDIGRP----FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+ +I + +I + FSP F + ++ S Q D+QEFLS+++D +
Sbjct: 1098 AQAFAHI-LHEIWQGEMSFFSPISFRRSICSYASQFAGS-----EQHDSQEFLSWLLDAL 1151
Query: 319 HDELLKLQGEST-SINGANTALVS-----LAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H++L ++ +ST + A + +A E EW +N S V D
Sbjct: 1152 HEDLNRVISKSTYEVTPEREAELEKLPQQIASEQEWRIYRMRNDSIVV-----------D 1200
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYS--EAVHTIEDALRLFSAPENLEGYRT 429
F GQ ++ ++ +K S T F+ L L + + T+++ L F E +E
Sbjct: 1201 FFQGQFRNRMECMTCHKTSTTYNSFMNLSLPVPTSKHGKITLQNCLDAFVKEEVMEKSDA 1260
Query: 430 SSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLV 488
+ N V+ A K + + L +L++ RFS+ + K+ K V FPL+ + + +
Sbjct: 1261 WNCPNCKVLRKATKQLSLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPLKGLELTNYMP 1320
Query: 489 TPSAEG---------------------RKYELVATVTHHGRDPSKGHYTADARYFND--Q 525
P G KY+L A H G S GHYTA + N Q
Sbjct: 1321 PPLPPGVDRGQAAVQYGNDDPRQQTPPYKYDLYAVTNHFGSL-SSGHYTA---FINSRGQ 1376
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
WL+ DD+ +T +V+ AYVL+YK+V
Sbjct: 1377 WLYCDDSRITPSDAKEVVGKPAYVLYYKRV 1406
>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
Length = 1108
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 768 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 821
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 822 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 871
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 872 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 920
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 921 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 980
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 981 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1040
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1041 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1096
>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
Length = 1080
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 892
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + I + SPS F+ ++ + P Q+DAQEFL F++D +H
Sbjct: 110 -AKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLH-- 161
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQL 378
N N V E P ++ + +L S + D+F GQL
Sbjct: 162 -----------NAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASETT 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT++ +S+V AY+LF
Sbjct: 328 NHAVYNLYAVSNHSGTTVG-GHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
Length = 1108
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 768 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 821
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 822 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 871
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 872 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 920
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 921 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 980
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 981 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1040
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1041 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1096
>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Sarcophilus harrisii]
Length = 1069
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 729 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 782
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + SG Q+D+QE L F+MD +H
Sbjct: 783 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 832
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 833 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 881
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 882 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 941
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 942 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKR 1001
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1002 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1057
>gi|114052120|ref|NP_001039841.1| ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|122136171|sp|Q2KJ72.1|UBP21_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|86821766|gb|AAI05489.1| Ubiquitin specific peptidase 21 [Bos taurus]
Length = 565
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
Length = 1080
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 892
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|341875422|gb|EGT31357.1| hypothetical protein CAEBREN_29462 [Caenorhabditis brenneri]
Length = 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 151/362 (41%), Gaps = 58/362 (16%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
PRG+ N GN CF+NA LQAL S + FV + L P L ++ S +
Sbjct: 231 PRGMRNLGNTCFMNAVLQALGSITEFVDYIMTL----------PPLEDYMEEASGKNGNC 280
Query: 261 GGSSKKKNI----SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ + + + SV + P +P F + V G RQ DA EF+ +++D
Sbjct: 281 YLTDEYRKLLHTMSVRNFREPCNPGPFREAFVS----VCTRFRGF-RQHDAHEFMKYLLD 335
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
QMH EL K + L + E+DE T LS F G
Sbjct: 336 QMHTELKKCKN-----------LPEMPEDDEKVT------------------PLSRHFEG 366
Query: 377 QLKSVVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLE-GYRTSS 431
L+S V Q GN S + F L LDI S+ + D L F E LE G +
Sbjct: 367 MLQSSVVCQVCGN-CSNKLDEFWDLSLDIPRISKPRIRLSDCLSDFFKKEILEKGDKPMC 425
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
+ T K + I+ L ++L L + RF G K+ + FP+Q + + L S
Sbjct: 426 SKCNTKQTCSKQLFIKKLPEVLCLQIKRFK---DGGGKIDTLIEFPMQSLSVDEFLTEDS 482
Query: 492 AEG-RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
E YEL + + H G GHY A R +W HFDD VT S + +AY+L
Sbjct: 483 DEPPCTYELQSIIVHVGYGCQSGHYVAFGRRGGAKWYHFDDTKVTTAEPSLISKQKAYLL 542
Query: 551 FY 552
Y
Sbjct: 543 LY 544
>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
garnettii]
Length = 1087
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 747 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 800
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 801 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 850
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 851 EDLNKADNRKRHKEENNDHLDDFKAAEQAWQKHKQLNESIIVA-----------LFQGQF 899
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 900 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 959
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 960 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1019
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1020 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSEISVSSVKSSAAYILFY 1075
>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 343
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 156/375 (41%), Gaps = 54/375 (14%)
Query: 188 AINEPVKSVKDLLP--RGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYP 244
+ E ++ L P GL N N C++NA LQ L S +P VQ L D+ +
Sbjct: 8 SFKEQLEDTSSLHPGLTGLQNLENTCYMNAVLQCLCSLTPLVQYFLSGKWNTDLHQEIGE 67
Query: 245 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRP 302
+ TAF VSD + +G+ SP F +V P R
Sbjct: 68 SATAFGCLVSD----------------MWLGKFDYVSPEAFHSVFGKRYPAF-----SRR 106
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
Q DAQEFL ++D +H+ +++ + +E + G +S+
Sbjct: 107 TQHDAQEFLICVLDDLHEAFKEVRAQ--------------LQERQSPAAGASTRSSSG-- 150
Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
S ++ +F GQL ++ K S + F +L L I S V +++D L F P
Sbjct: 151 ----TSIITHLFEGQLSYGIRCLTCKTLSDRPESFTILSLPIPSTRVCSLQDCLECFFQP 206
Query: 422 ENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
+ L R G+ T K S I +I+I HL RF++ + KL +V +P
Sbjct: 207 DTLTWNNQIRCHRCGSNQDATVKAS--ITKAPQIIIFHLKRFAWQDKHRRKLSTTVCYPF 264
Query: 479 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAI 537
+ + T +Y L A V H G D GHYTA ++ W FDD VT I
Sbjct: 265 SHLDLSPYISTSCHNTTEYSLCAVVNHAG-DLDYGHYTAFCKHSITKHWYSFDDDQVTKI 323
Query: 538 GTSKVLHDQAYVLFY 552
S V D AY+LFY
Sbjct: 324 PDSAVQADTAYLLFY 338
>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
Length = 899
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 559 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 612
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 613 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 662
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 663 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 711
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 712 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 771
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 772 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 831
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 832 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 887
>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Sarcophilus harrisii]
Length = 1100
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 760 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 813
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + SG Q+D+QE L F+MD +H
Sbjct: 814 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 863
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 864 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 912
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 913 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 972
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 973 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKR 1032
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1033 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1088
>gi|167999895|ref|XP_001752652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696183|gb|EDQ82523.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 162/369 (43%), Gaps = 41/369 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C+ N+ LQAL C PF + L E + P A + + +S+ T
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYCGQKKPVA--ESEENLLTCLSELFTQINS 81
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
KK + +P F ++ N + +DA EFL+F+++++ D L
Sbjct: 82 QKKKTGV--------IAPKRFVQRVRK-----QNELFRSYMHQDAHEFLNFLLNELVDIL 128
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+K + S +G++T+ + G N A + + + + IF G L +
Sbjct: 129 VKEAQAANSNSGSHTSPEKVVGN------GATNGLANGNHKEPVVTWVHKIFQGTLTNET 182
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTA 440
+ + +A + FL L LDI E +I LR FS+ E L + + A
Sbjct: 183 RCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEA 240
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
+K +KI++ +IL LHL RF Y Q KL V FPL+L L P +E +Y
Sbjct: 241 QKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEA-EYS 299
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL------------HDQ 546
L A V H G P+ GHY + + N WL FDD +V I S V D
Sbjct: 300 LFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDH 358
Query: 547 AYVLFYKQV 555
Y+LFY+ +
Sbjct: 359 GYILFYESL 367
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 152/359 (42%), Gaps = 70/359 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 51 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 110
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG D+ +P + S + +QEDA EFL F ++ MH
Sbjct: 111 SG-----------DVMKP--------------SQILTSAFHKRKQEDAHEFLMFTLETMH 145
Query: 320 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ L++ Q E TS ED S + DIFGG
Sbjct: 146 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 172
Query: 378 LKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
+S +K + S + PFL + LDI S V +++ AL+ E L G + G
Sbjct: 173 WRSQIKCHHCQGTSYSYDPFLDIPLDISS--VQSVKQALQDTEKAEELCGENSYYCGRCR 230
Query: 437 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
A K++K+ + K+L+L L RFS GS G KL + V +P L L + L P+
Sbjct: 231 QKKPASKTLKLYSAPKVLMLVLKRFS-GSMGK-KLDRKVSYPEFLDL-KPYLSQPTGGPL 287
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G GHY + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 288 PYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 346
>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
Length = 1088
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 748 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 801
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 802 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 851
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 852 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 900
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 901 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 960
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 961 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDLSQYVIGPKNNLKK 1020
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1021 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1076
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 154/359 (42%), Gaps = 71/359 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG D+ +P S ++ A K R+EDA EFL F ++ MH
Sbjct: 112 SG-----------DVMKP-SQNLTSAFHK--------------RKEDAHEFLMFTLETMH 145
Query: 320 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ L++ Q E TS ED S + DIFGG
Sbjct: 146 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 172
Query: 378 LKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
+S +K + S + PFL + LDI S V +++ AL+ E L G + G
Sbjct: 173 WRSQIKCHHCQGTSYSYDPFLDIPLDISS--VQSVKQALQDTEKAEELCGENSYYCGRCR 230
Query: 437 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
A K++K+ + K+L+L L RFS GS G KL + V +P L L + L P+
Sbjct: 231 QKKPASKTLKLYSAPKVLMLVLKRFS-GSMGK-KLDRKVSYPEFLDL-KPYLSQPTGGPL 287
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G GHY + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 288 PYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 346
>gi|344230726|gb|EGV62611.1| cysteine proteinase [Candida tenuis ATCC 10573]
Length = 314
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 136/309 (44%), Gaps = 66/309 (21%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE----------------- 345
+QEDA+EFL +++D +H+EL+ SI N +SL E
Sbjct: 16 QQEDAEEFLGYLLDGLHEELVH------SIREVNNEQISLLLETVADNETKLQIKNAIKI 69
Query: 346 -----------------------DEWETVGPKNKSAVT-RTQSFLPSALSDIFGGQLKSV 381
+ W +G +K + RT PS + IFGGQ +SV
Sbjct: 70 IKKLNNSSNGGNDNDNSNDDDDNEGWNEIGGGHKKVSSKRTVEIEPSPIKTIFGGQFRSV 129
Query: 382 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
++ K S T+ PF + LDI ++ ++ IEDA + + PE + + V A
Sbjct: 130 LQIPNKKDQSITLDPFQCIQLDIKADQINNIEDAFKQLNEPEQI----PFKLNDNKEVLA 185
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS---TKLHKSVRFPLQLVLGRDLLVT-PSAEGRK 496
KK I +L +L++HL RFS+ + + KL K + + +L + +L + R
Sbjct: 186 KKQTFIDSLPDVLVIHLKRFSFENVNNGNIEKLRKKIEYTHKLSIPLELFSNWRKSVNRD 245
Query: 497 YELVATVTHHGRDPSKGHYTADARY-----FNDQWLHFDDASVTAIGTSKVLHD-----Q 546
Y+L V HHG GHYT D + +W+ DD S+ I VL +
Sbjct: 246 YKLTGVVYHHGIIAEGGHYTCDVLRPMTVSDSSRWIRIDDTSINNIDEDDVLSNDDDTKN 305
Query: 547 AYVLFYKQV 555
AY+LFY+++
Sbjct: 306 AYLLFYQKL 314
>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
abelii]
gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
abelii]
gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
Length = 1118
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Nomascus leucogenys]
gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Nomascus leucogenys]
gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Nomascus leucogenys]
Length = 1117
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 777 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 830
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 831 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 880
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 881 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 929
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 930 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 990 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1049
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1050 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1105
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 161/370 (43%), Gaps = 59/370 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
H+E+ N V E P ++ + +L S + D+F
Sbjct: 161 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 207
Query: 376 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG---- 426
GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 208 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 265
Query: 427 --YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
YR + K +Q KIL+LHL RFS ++KL V FPL+ + R
Sbjct: 266 TCYRCRARKRC-----IKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLR 320
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVL 543
+ + + Y L A H G GHYTA R +W F+D+SVT + +S+V
Sbjct: 321 E-FASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVR 378
Query: 544 HDQAYVLFYK 553
AY+LFY+
Sbjct: 379 TSDAYLLFYE 388
>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 348
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 167/371 (45%), Gaps = 45/371 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
GL N GN CFLN++LQ L + P E+ ++ G TA+ + +
Sbjct: 4 GLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELMKEL 63
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ S IS R P+ F++ L++F P + Q DAQE LSF++D
Sbjct: 64 WLQAAPVSGYTKIS----ARVVKPTRFKSSLESFAPQFLGT-----SQHDAQELLSFLLD 114
Query: 317 QMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
+H++L ++ E +G + ++ + W+ ++KS V D
Sbjct: 115 GIHEDLNRIPKKPYIEDRDCDGTHDERDAI---EAWKNYLRRDKSLVV-----------D 160
Query: 373 IFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL--EGYRT 429
IF GQL++ + + + +PF+ L L + ++ HT++D LRL+ A E L E
Sbjct: 161 IFQGQLRNTLTCLTCRHVNVRFEPFMYLSLPLNDDS-HTLDDCLRLYLAEERLVRENQWY 219
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRD-L 486
S KK+ + + ILI+HL RF + G +K + +R+P+ +
Sbjct: 220 CSVCQTHRDATKKT-DLWIVPAILIVHLKRFKFNEYGQLGSKNNACIRYPVGDSWDLSGV 278
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHD 545
+ + +E Y+L A H G D GHYTA + F+D W F+D + I + +
Sbjct: 279 VCSRGSEEPLYDLYAVSNHVG-DLGGGHYTAYSLNRFDDHWYEFNDTTCRKIDDRTLQGN 337
Query: 546 --QAYVLFYKQ 554
AY+LFY +
Sbjct: 338 SSSAYLLFYNR 348
>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
leucogenys]
Length = 1011
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 671 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 724
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 725 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 774
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 775 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 823
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 824 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 883
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 884 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 943
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 944 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 999
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 156/363 (42%), Gaps = 47/363 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G +F G
Sbjct: 743 GLRNLGNTCYMNSILQCLCNTPAMAEYFNSNYYLEDINRSN------ILGHKGEFAEEFG 796
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 797 VIMK-----ALWAGLYKCISPRDFKITIGKIN----DQFAGY-DQQDSQELLLFLMDGLH 846
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
++L K + N L D A ++ + S + +F GQ K
Sbjct: 847 EDLNKADNKKRYKEEENDHLDDQTAAD----------LAWSKHKLLNESIIVALFQGQFK 896
Query: 380 SVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
S V+ + ++ S T + F+ L L + S + +++D LRLFS E L T N V
Sbjct: 897 STVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKL-------TDNNKVF 949
Query: 439 T--------AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
+ K ++I + IL++HL RFSY + KL +V FPL + ++ P
Sbjct: 950 CRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTTVDFPLDNLDLTQYVIGP 1009
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYV 549
++Y L H+G GHYTA + Q W FDD V+ I TS V AY+
Sbjct: 1010 KQTLKRYYLYGVSNHYG-GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYI 1068
Query: 550 LFY 552
LFY
Sbjct: 1069 LFY 1071
>gi|417411771|gb|JAA52312.1| Putative ubiquitin carboxyl-terminal hydrolase 21, partial
[Desmodus rotundus]
Length = 583
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 162/372 (43%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 231 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 289
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 290 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 331
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN+ S L EE + N K + R S
Sbjct: 332 HLEINR-RGRRAPAILANSPAPSAPRRGGALLEEPDLSDDDRANLMWKRYLERED----S 386
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 387 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 446
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
LE T + K + +Q +IL+LHL RFS K V FPLQ L
Sbjct: 447 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLS 506
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 507 LGD--FASDKAGSPTYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 562
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 563 VASSEGYVLFYQ 574
>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
Length = 1120
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 780 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 833
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 834 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 883
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 884 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 932
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 933 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 992
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 993 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1052
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1053 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1108
>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1118
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|390337799|ref|XP_783431.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Strongylocentrotus purpuratus]
Length = 370
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 162/369 (43%), Gaps = 55/369 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + +T PK LT + +T
Sbjct: 35 GLVNFGNTCYCNSVLQALYFCKPFRDRVLAYKT--APKKKETLLTCLSDLFNSINT---- 88
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + V+ +P F A LK N + Q+DA EFL ++++ + D L
Sbjct: 89 --QKKKVGVV------APKKFVARLKK-----ENEVFDNYMQQDAHEFLIYLLNTIAD-L 134
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + ++ I G + +T+ P+ + +IF G L +
Sbjct: 135 LQAERKADKIAGKGKPGTP--------NGIINGNNNDMKTE---PTWIHEIFQGTLTNET 183
Query: 383 KAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ + S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLCCEGVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCHEYKYYCETCCSKQEA 241
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEG--RK 496
+K ++++ L ++L LHL RF Y Q TKL V FPL+L R + + AE +
Sbjct: 242 QKRMQVKKLPQLLALHLKRFKYMEQSHRYTKLSYRVVFPLEL---RLMNTSDDAEAPDKL 298
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LV+ V H G P++GHY + F WL FDD V I S +
Sbjct: 299 YDLVSVVVHCGSGPNRGHYITIVKSFG-FWLLFDDDMVEKIEISSIEEFYGLATEVQKNS 357
Query: 545 DQAYVLFYK 553
D Y+LFY+
Sbjct: 358 DSGYILFYQ 366
>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|7363366|gb|AAF61308.1|AF233442_1 NEDD8-specific protease [Homo sapiens]
Length = 381
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 164/378 (43%), Gaps = 61/378 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CFLNA LQ L S P LR RD + + P GG
Sbjct: 29 GLRNLGNTCFLNAVLQCLSSTRPLRDFC--LR-RDFRQ----------------EVPGGG 69
Query: 263 SSKKKNISV---------LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+++ + LD +P+ F AV + + P S SG Q+DAQEFL
Sbjct: 70 RAQELTEAFADVIGALWHLDSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKL 124
Query: 314 IMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQ 363
+M+++H E+ + +G AN + S L EE E N K + R
Sbjct: 125 LMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED 183
Query: 364 SFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLF 418
S + D+F GQLKS +K Q S T + F L L I ++ + D LF
Sbjct: 184 ----SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVFLRDCFNLF 239
Query: 419 SAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRF 476
+ E LE T + K + +Q +IL+LHL RFS S+GS K V F
Sbjct: 240 TKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDF 298
Query: 477 PLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
PLQ L LG + A Y+L A H G GHYTA R W ++D+ V+
Sbjct: 299 PLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVS 354
Query: 536 AIGTSKVLHDQAYVLFYK 553
+ ++V + YVLFY+
Sbjct: 355 PVSENQVASSEGYVLFYQ 372
>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1012
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|167534112|ref|XP_001748734.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772696|gb|EDQ86344.1| predicted protein [Monosiga brevicollis MX1]
Length = 356
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 36/273 (13%)
Query: 304 QEDAQEFLSFIMDQMHDEL---------LKLQGESTSINGANTALVSLAEEDEWETVGPK 354
Q+DA+E LSF++D++H E+ L +G+ ++ G + A E W K
Sbjct: 92 QQDAEELLSFLLDKLHLEVAAYLEKHPELMEEGDLSAGAGNDDA------EGGWHEASSK 145
Query: 355 ----NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
+ + V + + +S F +++S + +G + S T+QP+ L LDI E V +
Sbjct: 146 GVGVSVNTVETHDRQVETPISSAFTVRMRSTLDMKGQRRSVTIQPYHCLPLDIEPEHVRS 205
Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
+ DA+R E L ++ V+ K + ++TL IL+L L RFSYG G KL
Sbjct: 206 LHDAMR-----ETLRNEPLYASSQDEVI-GHKQLLLETLPPILLLSLKRFSYGPYGPIKL 259
Query: 471 HKSVRFPLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
K V+F +L + + + +P+A YEL A + HHG + +GHYT R ++
Sbjct: 260 QKHVKFEAELCIDPEFM-SPTARQIHGSDTVYELAAVLFHHGSESHQGHYTC-CRSTSEG 317
Query: 526 WLHFDDASVTAIGTSKVLHDQ----AYVLFYKQ 554
W+ +D V+ I + V + AYVL Y++
Sbjct: 318 WIELNDTRVSPIALTAVCAPRSGADAYVLCYRK 350
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 16 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 66
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 67 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 117
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 118 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 167
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 168 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 225
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 226 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 284
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+ F
Sbjct: 285 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHF 343
Query: 552 YK 553
Y+
Sbjct: 344 YE 345
>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
Length = 1118
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|426216989|ref|XP_004002736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2 [Ovis
aries]
Length = 592
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 165/375 (44%), Gaps = 55/375 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 240 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 298
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 299 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 340
Query: 319 HDELLKLQGESTSI------------NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
H E+ + + I GA L+++D + K + R
Sbjct: 341 HLEINRRGRRAPPILASSPAPPPPRLGGALLEEPELSDDDRANLMW---KRYLERED--- 394
Query: 367 PSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAP 421
S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+
Sbjct: 395 -SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKE 453
Query: 422 ENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ 479
E LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ
Sbjct: 454 EELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQ 512
Query: 480 -LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 538
L LG + A Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 513 RLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVS 568
Query: 539 TSKVLHDQAYVLFYK 553
++V + YVLFY+
Sbjct: 569 ENQVASSEGYVLFYQ 583
>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
Length = 1012
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Callithrix jacchus]
Length = 1118
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
Length = 1118
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
gorilla]
Length = 1118
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 165/385 (42%), Gaps = 54/385 (14%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C+PF + L E +++I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCAPFREQLLEYYANSKNIGDAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T + SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+F+++++ D L+ E+ ++ + E GPK+ A ++ L
Sbjct: 113 AHEFLNFLLNELVD---ILEKEAQAVKSETET----SSPPEKTANGPKHAQANGVSKEPL 165
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + F G L + + Q +A + F L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 339 QTFFGSAQEYSSNTDHGYILFYESI 363
>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Callithrix jacchus]
Length = 1012
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
troglodytes]
gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
troglodytes]
gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
troglodytes]
gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
Length = 1118
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
Length = 366
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 162/369 (43%), Gaps = 57/369 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + E + ++ + LT S
Sbjct: 32 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN-KRTKETLLTCLADLFH-----SIA 85
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ + + +
Sbjct: 86 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHISEII 133
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + ++++ N + +N +A T + P+ + +IF G L S
Sbjct: 134 LAERQQNSTTNNIKSKATG------------ENGTAHTTPE---PTWVHEIFQGILTSET 178
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-A 440
+ S+ + F L +DI E +I LR FS E L N A
Sbjct: 179 RCLNCENVSSKDEDFFDLQVDI--EQNTSITHCLRCFSNTETLCSDNKFKCDNCSSYQEA 236
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 237 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 293
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 294 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDQVDKIDASTIEDFYGLTSDTQKSS 352
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 353 ETGYILFYQ 361
>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
troglodytes]
Length = 1012
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|426216987|ref|XP_004002735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Ovis
aries]
Length = 565
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 165/375 (44%), Gaps = 55/375 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSI------------NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
H E+ + + I GA L+++D + K + R
Sbjct: 314 HLEINRRGRRAPPILASSPAPPPPRLGGALLEEPELSDDDRANLMW---KRYLERED--- 367
Query: 367 PSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAP 421
S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+
Sbjct: 368 -SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKE 426
Query: 422 ENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ 479
E LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ
Sbjct: 427 EELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQ 485
Query: 480 -LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 538
L LG + A Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 486 RLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVS 541
Query: 539 TSKVLHDQAYVLFYK 553
++V + YVLFY+
Sbjct: 542 ENQVASSEGYVLFYQ 556
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L +D+ T + + +F
Sbjct: 275 GLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDLSH----TSSTHTALMEEF----- 325
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 326 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 376
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ T +N ++ +DE K + + S + D+F GQL
Sbjct: 377 HNEVNRV----TVRPKSNPENLNHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 426
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 427 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRSYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 484
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ IL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 485 CCRARKRCIKKFSIQRFPTILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 543
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 544 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 602
Query: 552 YK 553
Y+
Sbjct: 603 YE 604
>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
max]
Length = 369
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 164/385 (42%), Gaps = 54/385 (14%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF + L E + I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSIADAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+F+++++ D +L+ + +S N T+ S E GPKN A + L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQSAK-NDQETSPPS-----EKAANGPKNGLANGAKKEPL 165
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + F G L + + + +A + F L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SD----TAENSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 339 QTFFGSSQEYSSNTDHGYILFYESI 363
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 160/366 (43%), Gaps = 40/366 (10%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTA-FVGFVSD 255
D P GL N GN CF+N+ +Q L P ++ L++ T +I A F F +
Sbjct: 30 DKAPLGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATL 89
Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
+ S+ + IS P F + ++ F P Q+D+QEFL +++
Sbjct: 90 MKSIWRSSNGEYAIS---------PQAFRSQIQKFAPRFMGY-----SQQDSQEFLHYLL 135
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
+H+++ ++ + E D+ + K A R F S + D F
Sbjct: 136 QGLHEDINRITSRPRHVT---------TEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFV 186
Query: 376 GQLKSVVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTSS 431
+K G+K S T PF L L I S++V TI+ L LF+ E L+G +
Sbjct: 187 XXXXXTLKCSVCGHK-SVTFDPFWDLSLPIPKSSDSV-TIQQCLSLFTKEEVLDGDEKPT 244
Query: 432 TGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
N KS I KIL+LHL RFS G + KL+ V FPL +L + P
Sbjct: 245 CSNCETRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPLT-----NLDLCP 299
Query: 491 SAEGRKYEL--VATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQA 547
Y + + V++H GHYTA + + +W +D VT + +S+V +A
Sbjct: 300 YMSNSHYVMYNLYAVSNHSGSTYSGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEA 359
Query: 548 YVLFYK 553
YVLFY+
Sbjct: 360 YVLFYE 365
>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
catus]
Length = 1010
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 670 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 723
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 724 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 773
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 774 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 822
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 823 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 882
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 883 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 942
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 943 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 998
>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Oreochromis niloticus]
gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 372
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 178/419 (42%), Gaps = 74/419 (17%)
Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
+SKF C NA+A I GS++ P +NE GL+N GN C+
Sbjct: 7 VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49
Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
N+ LQAL C PF + + L R P+ LT D +++K+ + V+
Sbjct: 50 CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101
Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
P F L+ N + Q+DA EFL+++++ + D LL+ + +
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQEKT 149
Query: 333 NG--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
NG AN L S N S T P+ + +IF G L + +
Sbjct: 150 NGRLANGTLDS-----------QNNNSNATPA----PTWVHEIFQGTLTNETRCLTCETI 194
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQT 448
S+ + FL L +D+ E +I LR FS E L Y+ A K ++++
Sbjct: 195 SSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKK 252
Query: 449 LSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHH 506
L IL LHL RF Y Q TKL V FPL+L L + E R Y+LVA V H
Sbjct: 253 LPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLYDLVAVVVHC 311
Query: 507 GRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
G P++GHY A + +D WL FDD V I + + Y+LFY+
Sbjct: 312 GSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQ 369
>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 178/419 (42%), Gaps = 74/419 (17%)
Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
+SKF C NA+A I GS++ P +NE GL+N GN C+
Sbjct: 7 VSKFTSFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49
Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
N+ LQAL C PF + + L R P+ LT D +++K+ + V+
Sbjct: 50 CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101
Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
P F L+ N + Q+DA EFL+++++ + D LL+ + +
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQEKT 149
Query: 333 NG--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
NG AN L S N S T P+ + +IF G L + +
Sbjct: 150 NGRLANGTLDS-----------QNNNSNATPA----PTWVHEIFQGTLTNETRCLTCETI 194
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQT 448
S+ + FL L +D+ E +I LR FS E L Y+ A K ++++
Sbjct: 195 SSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKK 252
Query: 449 LSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHH 506
L IL LHL RF Y Q TKL V FPL+L L + E R Y+LVA V H
Sbjct: 253 LPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLYDLVAVVVHC 311
Query: 507 GRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
G P++GHY A + +D WL FDD V I + + Y+LFY+
Sbjct: 312 GSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQ 369
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 167/408 (40%), Gaps = 68/408 (16%)
Query: 169 QNAAACNSSI---SGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
+++ A NSS+ S K +P+ KS KD GL N GN CF+NA LQ+L +
Sbjct: 193 EDSFAENSSVPTKSRQKGLPLNG-----KSQKDKKIVGLKNLGNTCFMNAVLQSLNNIQE 247
Query: 226 FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIG-----RPFSP 280
F +L + ++ G + + +K + L+ G SP
Sbjct: 248 FSYYFSQLPSLEMKTNGRKVYHSRSYTRQEMHDVVMAEELRKVLINLNTGGCGSKAAISP 307
Query: 281 SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALV 340
V+ P +Q+DA EFL +++D++H EL +L
Sbjct: 308 ECLFLVIWKVVPRFRGY-----QQQDAHEFLRYMLDRLHTELQQLV-------------- 348
Query: 341 SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLL 399
P V S + + +FGG L+S V+ S PFL L
Sbjct: 349 ------------PDRPEGVKAPASIVTA----VFGGTLQSEVRCLACGTESKKFDPFLDL 392
Query: 400 HLDIYSEAVH----TIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKI 452
L++ H ++ D L F E L E Y SS T K I+ L +
Sbjct: 393 SLELPESGRHDAPVSLTDCLASFVQIEELADTERYFCSSCKCKQKST--KQFWIRRLPNV 450
Query: 453 LILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA-----EGRK---YELVATVT 504
L LHL RF + + TK+ S+ FPL L L V P+ GR Y+L A +
Sbjct: 451 LCLHLKRFRWHNYFRTKVDTSISFPL-LSLDMSGFVLPNVPDTRRSGRGSLLYDLAAVIV 509
Query: 505 HHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
HHG GHYTA A +QW HF+D +V A ++ V + Y+LFY
Sbjct: 510 HHGSGAGSGHYTAFA-INEEQWFHFNDQTVRATDSAAVASCKPYILFY 556
>gi|344287000|ref|XP_003415244.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Loxodonta
africana]
Length = 565
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 164/372 (44%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I N A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILANNPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKRGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL+L L RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|354489521|ref|XP_003506910.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Cricetulus griseus]
Length = 565
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 160/371 (43%), Gaps = 47/371 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
E T + K + +Q +IL+LHL RFS K V FPLQ L L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 489
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
G + A Y+L A H G GHYTA R W ++D+ V+ + ++V
Sbjct: 490 GD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQV 545
Query: 543 LHDQAYVLFYK 553
+ YVLFY+
Sbjct: 546 ASSEGYVLFYQ 556
>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
catus]
Length = 1087
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 747 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 800
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 801 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 850
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 851 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 899
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 900 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 959
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 960 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1019
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1020 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1075
>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 166/373 (44%), Gaps = 49/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTLTAFVGFVSDFDTPS 260
GL N GN C+ N+ LQAL C PF QLL+ +++ + +A LT S +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLLTCLSELFSQIN--- 80
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
S+KK V+ +P F +K N + +DA EFL+F+++++ D
Sbjct: 81 ---SQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQDAHEFLNFLLNELVD 126
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQSFLPSALSDIFGGQL 378
L + + S +G T+ + VG + S + + + + + IF G L
Sbjct: 127 ILEREAKAAKSNSGCETS--------PGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGIL 178
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAG 436
+ + + +A + FL L LDI E +I LR FS+ E L +
Sbjct: 179 TNETRCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTETLNAEDKFFCDKCCS 236
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ A+K +KI++ +IL LHL RF Y Q KL V FPL+L L P +E
Sbjct: 237 LQEAQKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEA 296
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL----------- 543
+Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 297 -EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEIIDESIVQTFFGSTQEYSN 354
Query: 544 -HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 355 NTDHGYILFYESL 367
>gi|146161769|ref|XP_001033384.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|146142812|gb|EAR85721.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 686
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 57/376 (15%)
Query: 190 NEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSP-----FVQLLQELRTRDIPKAG 242
N+P K +K LL P L N+ N C++NA LQ+++S F ++ E + + I K
Sbjct: 358 NDPSK-LKKLLFRPYRLENNSNYCYMNACLQSILSIGELNTYFFDKMYLEYKDQ-ITKKP 415
Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAV-LKNFTPDVPNSISGR 301
+ A+ ++ F + + SPS+F+ +NF P+
Sbjct: 416 HKFTIAYSDLLTRFQKSNSN-------------QIISPSLFKKYSQQNFDPN-------- 454
Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
Q DAQE+L F++ ++ DEL + N + + K
Sbjct: 455 -EQHDAQEYLRFVLGEIQDEL--------NFPLPNKRPAEFKDSQQASKFYFK------- 498
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
+ S + +F GQL S V+ Q K S+T PFL L L I S+++ + + LF
Sbjct: 499 ---YHTSIVDRLFCGQLISKVQCQKCKYISSTFDPFLDLSLPIESKSLKDLNSCMDLFFK 555
Query: 421 PENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
PE ++G Y+ A KS ++ + K L++HL RF TK+ + + +P
Sbjct: 556 PEEIDGEYKCEKC--TKTSRAIKSCQLGNIPKYLVIHLKRFKMFPY-KTKIKQQISYPST 612
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L + + E KY L + H G GHY + + +++W + DD S+
Sbjct: 613 LDISK-YYANSGNESTKYSLNGVIIHQG-SADIGHYVSFNKRNDNKWFYCDDESIQECSN 670
Query: 540 SKVLHDQAYVLFYKQV 555
L +AY+LFY+++
Sbjct: 671 KDALDQEAYLLFYEKI 686
>gi|10720332|sp|Q9QZL6.1|UBP21_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853115|gb|AAD54322.1|AF177759_1 ubiquitin specific protease 16 [Mus musculus]
gi|18257320|gb|AAH21903.1| Ubiquitin specific peptidase 21 [Mus musculus]
Length = 566
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 160/372 (43%), Gaps = 48/372 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
LE T + K + +Q +IL+LHL RFS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLS 489
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 490 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 545
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 546 VASSEGYVLFYQ 557
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 142/353 (40%), Gaps = 59/353 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P +L ++ + G+ + + SG
Sbjct: 114 GLQNMGNTCFLNSALQCLTYTPPLANHMLSREHSKTCQEPGFCMMCTMQNHIIQVFANSG 173
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 174 NVIKP--IGVLN--------ELKRIAKHFRYGS---------QEDAHEFLRYTVDAMQKS 214
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L T ++ A + + +FGG L+S
Sbjct: 215 CL----PGTKLDRQTQATTFIHQ----------------------------VFGGYLRSR 242
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVVT 439
VK KA S T PFL + L+I + ++ AL F PE L+G T +VT
Sbjct: 243 VKCLSCKAVSDTFDPFLDITLEI--KMAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT 300
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I +L L L RF+ + G K+ K V++P L L R + E + Y L
Sbjct: 301 ASKRFTIHRSPNVLTLSLKRFANFTGG--KITKDVKYPESLDL-RPFMSQSQGEPQNYGL 357
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A + H G GHY + N QW +D+SV+ VL+ QAYVLFY
Sbjct: 358 YAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFY 410
>gi|291397578|ref|XP_002715234.1| PREDICTED: ubiquitin-specific protease 21 [Oryctolagus cuniculus]
Length = 565
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 160/371 (43%), Gaps = 47/371 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDEL---------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
H E+ + G + S AL+ E + + K + R S
Sbjct: 314 HLEINRRGRRAPPILANGPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
E T + K + +Q +IL+LHL RFS K V FPLQ L L
Sbjct: 430 ELENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 489
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
G + A Y+L A H G GHYTA R W ++D+ V+ + ++V
Sbjct: 490 GD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSENQV 545
Query: 543 LHDQAYVLFYK 553
+ YVLFY+
Sbjct: 546 ASSEGYVLFYQ 556
>gi|224809307|ref|NP_038947.2| ubiquitin carboxyl-terminal hydrolase 21 [Mus musculus]
Length = 566
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 160/372 (43%), Gaps = 48/372 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
LE T + K + +Q +IL+LHL RFS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLS 489
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 490 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 545
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 546 VASSEGYVLFYQ 557
>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus rotundus]
Length = 1116
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKTTIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 879
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 988
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1048
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 171/387 (44%), Gaps = 54/387 (13%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF QLL+ +++ + +A L
Sbjct: 12 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLL 71
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T S + S+KK V+ +P F +K N + +D
Sbjct: 72 TCLSELFSQIN------SQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQD 114
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQS 364
A EFL+F+++++ D L + + S +G T+ + VG + S + +
Sbjct: 115 AHEFLNFLLNELVDILEREAKAAKSNSGCETS--------PGKVVGNGSVSGLANGTHKE 166
Query: 365 FLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ + + IF G L + + + +A + FL L LDI E +I LR FS+ E
Sbjct: 167 AVVTWVHKIFQGILTNETRCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTET 224
Query: 424 LEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
L + + A+K +KI++ +IL LHL RF Y Q KL V FPL+L
Sbjct: 225 LNAEDKFFCDKCCSLQEAQKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLEL 284
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
L P +E +Y L A V H G P+ GHY + + N WL FDD +V I S
Sbjct: 285 KLCNTTDDAPGSEA-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEIIDES 342
Query: 541 KVL------------HDQAYVLFYKQV 555
V D Y+LFY+ +
Sbjct: 343 IVQTFFGSTQEYSNNTDHGYILFYESL 369
>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
Length = 1106
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 766 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQDDINRSN------LLGHKGEVAEEFG 819
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 820 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 869
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 870 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 918
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ ++ S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 919 KSTVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 978
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 979 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKHSLKK 1038
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1039 YSLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1094
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 K-SVVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
K S+ S PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KGSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+L L RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLRLKRFSESRIRTSKLTTFVNFPLRDLDLREF-ASENT 536
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 552 YK 553
Y+
Sbjct: 596 YE 597
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 160/382 (41%), Gaps = 80/382 (20%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
S + GL N GN CF+NA LQ+L S L++E R TL A
Sbjct: 200 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFRK---------TLCALWQ--- 241
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
GS FSP V+ P+ +Q+DA EF+ ++
Sbjct: 242 -------GSQT-----------AFSPESLFYVVWKIMPNFRGY-----QQQDAHEFMRYL 278
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+D +H L+LQG NG + + ++ +E+ ++ NK + + ++ IF
Sbjct: 279 LDHLH---LELQG---GFNGVSRS--AMLQENS--SLSASNKCCINGAST----VVTAIF 324
Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE-------------------AVHTIEDA 414
GG L++ V S PFL L LDI S+ + + D
Sbjct: 325 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRAQITLVSDC 384
Query: 415 LRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 385 LRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTY 444
Query: 474 VRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 530
V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+
Sbjct: 445 VEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGRWFHFN 503
Query: 531 DASVTAIGTSKVLHDQAYVLFY 552
D++VT V +AY+LFY
Sbjct: 504 DSTVTLTDEETVGKAKAYILFY 525
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 155/377 (41%), Gaps = 71/377 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N C+ NATLQ L+ P +++ LT G S
Sbjct: 148 GLHNPSMACYANATLQVLLHTPPVLRI---------------ALTHDEGSCSQI------ 186
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 316
KKKN +L + + + K + P + S+S + RQED EF F+ D
Sbjct: 187 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRSLSQIKKGFSKNRQEDTHEFFRFVTD 244
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-------LPSA 369
+ NTAL L + V P N T S S
Sbjct: 245 ALQ----------------NTALAKLPK-----CVLPYNHRKFAHTTSRDTPEKIKHTSW 283
Query: 370 LSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 426
+ I+GG+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG
Sbjct: 284 VYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDRLEGDN 343
Query: 427 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQ 479
Y A KS KI IL LHL RFS G + K ++ ++F
Sbjct: 344 KYHCERCKRKA--NATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQT 401
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L + +V P++ G KY L H G + GHYT+ R + QW H DD V+ +
Sbjct: 402 LDIA-PYMVDPASPGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQL 460
Query: 540 SKVLHDQ-AYVLFYKQV 555
+VL+D+ AY+L Y +V
Sbjct: 461 EQVLNDKTAYLLSYIRV 477
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 145/354 (40%), Gaps = 61/354 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L +PF +L ++ + G+ + + +G
Sbjct: 30 GLQNMGNTCFLNSALQCLTYTAPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANTG 89
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 90 NVIKP--IGVLN--------ELKRIAKHFR---------YGSQEDAHEFLRYTVDAMQKS 130
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGGQLKS 380
L P K T+ +F+ +FGG L+S
Sbjct: 131 CL-----------------------------PGTKLDRQTQATTFI----HQVFGGYLRS 157
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVV 438
VK KA S T PFL + L+I + ++ AL F PE L+G T +V
Sbjct: 158 RVKCLNCKAVSDTFDPFLDIPLEI--KTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMV 215
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
TA K I + +L L L RF+ S G K+ K V++P L L R + E + Y
Sbjct: 216 TASKRFTIHRSANVLTLALKRFANFSGG--KITKDVKYPEYLDL-RPFMSQSQGEPQVYG 272
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G GHY + N QW +D+SV+ VL QAYVLFY
Sbjct: 273 LYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLSQQAYVLFY 326
>gi|343427156|emb|CBQ70684.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Sporisorium
reilianum SRZ2]
Length = 761
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 172/404 (42%), Gaps = 80/404 (19%)
Query: 177 SISGSKEVPMKAINEPVKSVK----DLLP---------------RGLINSGNLCFLNATL 217
+++G+ +P +A + P K+ K DL P GL N GN C++N+ +
Sbjct: 154 TLNGNGALPTEAPSSPTKNGKAKSRDLYPYKVSLRFPGKVRGVATGLANYGNTCYMNSVM 213
Query: 218 QALMSCSP--FVQLLQELRTRDIPKAGYPTLT-AFVGFVSDFDTPSGGSSKKKNISVLDI 274
Q+L+ P F L Q+L G P T V + F S SK N
Sbjct: 214 QSLIHTPPLAFALLTQDLDALHGELGGKPNATFDAVTAMHAFTRASLMGSKPTN------ 267
Query: 275 GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING 334
+P F LK F + RQEDA E+L F+++ + L
Sbjct: 268 ----APKEFNRNLKAFAKPLRQG-----RQEDAHEYLRFLLEALQQSCLA---------- 308
Query: 335 ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATV 393
A SL +D + RT + + +FGG+L+S V S T
Sbjct: 309 --RASKSLKPDDP-----------IRRT-----TFVQKMFGGKLRSRVTCHSCGHNSDTF 350
Query: 394 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLS 450
PF+ L L++ + + ++ DA R F A ++L G Y+ V A K I+
Sbjct: 351 DPFMDLSLEV-RKGITSLTDAFRAFVAKDHLTGSEKYKCDKCKRK--VDATKQFTIEAAP 407
Query: 451 KILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRD 509
L +HL RF+ +G K+ + + F L + L V +Y+L A V H+G
Sbjct: 408 PALTVHLKRFTAFGG----KVSRQINFDESLNIAPYLSVNRGPA--RYKLYAVVHHYGSG 461
Query: 510 PSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-AYVLFY 552
P+ GHY A R + +W DD+ V+ +G S L+DQ AY+LFY
Sbjct: 462 PNSGHYVASVRSPSGKWTRMDDSLVSEMGRSGPLNDQSAYILFY 505
>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
familiaris]
Length = 1010
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 670 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 723
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 724 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 773
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 774 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 822
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 823 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 882
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 883 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 942
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 943 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 998
>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
lupus familiaris]
Length = 1116
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 879
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 988
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1048
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|193787209|dbj|BAG52415.1| unnamed protein product [Homo sapiens]
Length = 285
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 33 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 91
Query: 363 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 92 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 141
Query: 422 ENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
E L + R + + K ++I L +L++HL RFSY + KL SV FPL+
Sbjct: 142 EKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLEN 201
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGT 539
+ ++ P +KY L + H+G +GHYTA + Q W FDD V+ I
Sbjct: 202 LDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDRGHYTAYCKNAARQRWFKFDDHEVSDISV 260
Query: 540 SKVLHDQAYVLFY 552
S V AY+LFY
Sbjct: 261 SSVKSSAAYILFY 273
>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
melanoleuca]
gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
Length = 1116
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 879
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 988
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1048
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 179/396 (45%), Gaps = 50/396 (12%)
Query: 169 QNAAACNSSISGSKEVPMKA-INEPVKSVKDLLPRGLI---NSGNLCFLNATLQALMSCS 224
+N+ C + S P++A ++ PV S GL+ N GN CF+N+ LQ L + +
Sbjct: 128 KNSVRC---LDSSLTSPLRATVSLPVNSHHSYHRGGLVGLNNLGNTCFMNSILQCLSNTA 184
Query: 225 PFVQLLQELR-TRDIPKAGYPT---LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSP 280
P + E R +DI K+ ++ + + P +S SP
Sbjct: 185 PLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIWDPDMANSST------------SP 232
Query: 281 SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALV 340
S F++ ++ F P Q+D+QEFL ++++ +H E+ ++Q I
Sbjct: 233 SRFKSQIQRFAPRFMGY-----SQQDSQEFLRYVLEGLHMEVNRVQKRPNPI-------- 279
Query: 341 SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLL 399
+ E E K R S S + D+F GQL S ++ + + S T PF L
Sbjct: 280 --KPDYEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKSTTFDPFWDL 337
Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
L I ++ +I D L LF++ E L+G R + KS IQ +IL+LHL
Sbjct: 338 SLPIPKKSNVSILDCLNLFTSKEELDGNERPICSRCKTRRRCAKSFSIQKFPQILVLHLK 397
Query: 459 RFSYGSQGSTKLHKSVRFPLQLVLGRDLL--VTPSAEGR--KYELVATVTHHGRDPSKGH 514
RFS G + +K+ V +PL+ + DL+ T S + +Y+L A V++H GH
Sbjct: 398 RFS-GERFRSKMSVMVDYPLRNL---DLIGFATSSCTQKSAQYKLYA-VSNHSGSVYTGH 452
Query: 515 YTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
YTA + W F+D+ V AI + V+ + YV
Sbjct: 453 YTASCLNPYTGDWHSFNDSHVHAISENSVVSAEGYV 488
>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
[Glycine max]
Length = 369
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 162/385 (42%), Gaps = 54/385 (14%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF + L E + I L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+F+++++ D +L+ + ++ + + E GPKN A + L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNGPKNGQANGVHKEPL 165
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + F G L + + Q +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKL 283
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 339 QTFFGSSQEYSSNTDHGYILFYESI 363
>gi|291234105|ref|XP_002736998.1| PREDICTED: deubiquitinating enzyme 1-like [Saccoglossus
kowalevskii]
Length = 349
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 157/369 (42%), Gaps = 67/369 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + L R PK LT ++
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCKPFRD--KVLAYRAQPKKKETLLTCLADLFNNI------ 76
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+S+KK + V+ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 77 ASQKKKVGVI------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 125
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ E G K K+ P+ + DIF G L +
Sbjct: 126 ------------------------QAEKQGGKPKNGNDNQIKPEPTWVHDIFQGTLTNET 161
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ + +I LR FS+ E L Y+ A
Sbjct: 162 RCLCCEAVSSKDEDFLDLSVDV--DQNTSITHCLRGFSSTETLCSEYKYYCENCCSKQEA 219
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR--DLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q TKL V FPL+L L D P +
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLMNTSDDAFNPD---KL 276
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV------------LH 544
Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 277 YDLVAVVIHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDLQKTS 335
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 336 ESGYILFYQ 344
>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 369
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 166/383 (43%), Gaps = 50/383 (13%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
K++ D P G L N GN C+ N+ LQAL C PF + L E + K+G
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANN--KSGGDAEEN 67
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
+ ++D T SS+KK V+ +P F LK N + +DA
Sbjct: 68 LLTCLADLFTQI--SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 114
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
EFL+F+++++ D L K + S +++ + GPKN A ++ L +
Sbjct: 115 EFLNFLLNELVDILEKEAQAAKSDPETSSSPEKIPN-------GPKNGQANGVSKEPLVT 167
Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
+ F G L + + Q +A + F L LDI E +I L+ FS+ E L
Sbjct: 168 WVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAE 225
Query: 428 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGR 484
+ + A+K +KI+ IL++HL RF Y Q S KL V FPL+L L
Sbjct: 226 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLSRYKKLSYRVVFPLELKLSN 285
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 543
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 286 ----TVEDSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQT 340
Query: 544 -----------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 341 FFGSSQEYSSNTDHGYILFYESL 363
>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
porcellus]
Length = 1077
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 737 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 790
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 791 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 840
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 841 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 889
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ ++ S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 890 KSTVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 949
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 950 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1009
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1010 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1065
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 155/377 (41%), Gaps = 71/377 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N C+ NATLQ L+ P +++ LT G S
Sbjct: 65 GLHNPSMACYANATLQVLLHTPPVLRI---------------ALTHDEGSCSQI------ 103
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 316
KKKN +L + + + K + P + S+S + RQED EF F+ D
Sbjct: 104 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRSLSQIKKGFSKNRQEDTHEFFRFVTD 161
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-------LPSA 369
+ NTAL L + V P N T S S
Sbjct: 162 ALQ----------------NTALAKLPK-----CVLPYNHRKFAHTTSRDTPEKIKHTSW 200
Query: 370 LSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 426
+ I+GG+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG
Sbjct: 201 VYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDRLEGDN 260
Query: 427 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQ 479
Y A KS KI IL LHL RFS G + K ++ ++F
Sbjct: 261 KYHCERCKRKA--NATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQT 318
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L + +V P++ G KY L H G + GHYT+ R + QW H DD V+ +
Sbjct: 319 LDIA-PYMVDPASPGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQL 377
Query: 540 SKVLHDQ-AYVLFYKQV 555
+VL+D+ AY+L Y +V
Sbjct: 378 EQVLNDKTAYLLSYIRV 394
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
GL N GN CF+NA LQ L P +L ++ + G+ + ++ + P
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNP- 170
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
G+ K + D+ R + K+F QEDA EFL + +D M
Sbjct: 171 -GNVIKPMPVINDLRR---------IAKHFRFG---------NQEDAHEFLRYTVDAMQK 211
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L N S S + + IFGG L+S
Sbjct: 212 ACL-------------------------------NGSTKLDRHSQATTLVCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCMNCKGVSDTFDPYLDIPLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKC--KK 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ S G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFSGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G GHY + N QW +D+ V+ VL+ QAYVLFY
Sbjct: 354 YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFY 409
>gi|357143206|ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831961 [Brachypodium
distachyon]
Length = 712
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 154/359 (42%), Gaps = 65/359 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CFLNATLQ + P L ++LR+ D P F F +
Sbjct: 171 GLRNMGNTCFLNATLQCITHTVP---LFKKLRSTDHPTPCSYDEDGFCSFCA-------- 219
Query: 263 SSKKKNI--SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMH 319
K++I S+ G P+ F+ L++ + RP +QEDA EFL ++D +H
Sbjct: 220 --LKEHIEESIRRSGSVLMPARFKDNLRSI-------LYFRPGQQEDAHEFLRCLLDNLH 270
Query: 320 DELL--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
L K +G+ +S + +S V R +FGGQ
Sbjct: 271 KCTLDPKSKGKPSSFD---------------------EESIVKR-----------VFGGQ 298
Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTG 433
LKS + + S T +PFL L L+I + V + AL F+ E + E T +
Sbjct: 299 LKSQLTCRECGHCSETSEPFLDLSLEI--DQVDDLVAALESFTKVEEIGDAENKLTCESC 356
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
N V K+ + +T ++ L RF+ K+ K V +P +L L S E
Sbjct: 357 NVQVCKGKRLLLDKT-PDVIAFQLKRFTTLDHSIEKIDKHVAYPSELDLKPFHSNPVSEE 415
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY+L V H G P+ GHY R W +D+ V +I + LH +AY+LFY
Sbjct: 416 ELKYDLYGVVEHSGL-PNYGHYVCAIRSSPSTWHLMNDSQVDSITETSALHQEAYILFY 473
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
GL N GN CF+NA LQ L P +L ++ + G+ + ++ + P
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNP- 170
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
G+ K + D+ R + K+F QEDA EFL + +D M
Sbjct: 171 -GNVIKPMPVINDLRR---------IAKHFR---------FGNQEDAHEFLRYTVDAMQK 211
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L N S S + + IFGG L+S
Sbjct: 212 ACL-------------------------------NGSTKLDRHSQATTLVCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCMNCKGVSDTFDPYLDIPLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKC--KK 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ S G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFSGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G GHY + N QW +D+ V+ VL+ QAYVLFY
Sbjct: 354 YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFY 409
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + P ++ LL E DI A + S
Sbjct: 649 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIH--- 705
Query: 262 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 706 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 752
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 753 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 803
Query: 380 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 804 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 863
Query: 438 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 494
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 864 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLT---GLDLSAFAAPRVPG 920
Query: 495 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L H G S GHYTA ++ ++ +W ++D+ V+A+ V+ ++AYVLFY+
Sbjct: 921 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYE 979
Query: 554 Q 554
Q
Sbjct: 980 Q 980
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 167/387 (43%), Gaps = 61/387 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
GL N GN CFLN +Q L S P + L T + G + + D
Sbjct: 224 GLYNMGNTCFLNTAVQCLSSVQPLTDFFIGNLHKKLLNTTNPMGTGGDVTLRYANLIKDI 283
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
G +K P+ F LK + P+ + G+ Q+DAQEFL++I+D
Sbjct: 284 ---WQGKEEK-----------IYPAQF---LKTLSKHAPHLVCGQ--QQDAQEFLAYILD 324
Query: 317 QMHDELLK--------------LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+H++L + L +S+ ++ L L + D E + + A
Sbjct: 325 SLHEDLNRADKLTNMKQKREKELSKKSSKNEDEDSLLDKLLDTDPSEEL--QEHQAYESW 382
Query: 363 QSFL---PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVH--TIEDALR 416
+ L S + D+F GQLKS +K N S F+ L + I + + +E+ +
Sbjct: 383 KDHLLNNRSIIVDLFQGQLKSTLKCLVCNHMSIKFDSFMYLTIPIPQKMMSDPKLEECVE 442
Query: 417 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
F+ E L+G A K + I L +LI++L RF + + K++ V
Sbjct: 443 EFTKEEILDGQNKWKCPKCDKFQRATKKIDIWKLPSVLIINLKRFEFNQKKKAKINDLVE 502
Query: 476 FPLQLVLGRDLLVTP-----SAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 529
FPL ++L +TP E Y+L A H G + GHY + +++ N+ QW +F
Sbjct: 503 FPL-----KNLDLTPYVSKLQREKPIYDLFAVANHEGY-LTGGHYYSYSKHRNNQQWYYF 556
Query: 530 DDASVTAI-GTSKVLHDQAYVLFYKQV 555
DD V I KV+ +AY+LFY ++
Sbjct: 557 DDEVVKKIKNEEKVVSKEAYILFYSKM 583
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + P ++ LL E DI A + S
Sbjct: 717 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIH--- 773
Query: 262 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 774 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 820
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 821 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 871
Query: 380 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 872 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 931
Query: 438 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 494
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 932 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLT---GLDLSAFAAPRVPG 988
Query: 495 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L H G S GHYTA ++ ++ +W ++D+ V+A+ V+ ++AYVLFY+
Sbjct: 989 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYE 1047
Query: 554 Q 554
Q
Sbjct: 1048 Q 1048
>gi|356529718|ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max]
Length = 730
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 149/364 (40%), Gaps = 68/364 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP----KAGYPTLTAFVGFVSDFDT 258
GL+N GN CFLNA LQ P VQ L+ T IP K G+ + A V
Sbjct: 125 GLLNLGNTCFLNAILQCFTHTVPLVQGLRS-STHLIPCSGHKDGFCVICALRIHVERSLV 183
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
GG+ SP F L F+ D R +QEDA EF+ +D++
Sbjct: 184 APGGT--------------LSPLKFVNNLNYFSSDF-----RRYQQEDAHEFMQCALDKL 224
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
L L+ +++N + LV +FGG+
Sbjct: 225 ERCFLDLK--KSNLNFEDDNLVE------------------------------KVFGGRF 252
Query: 379 KSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
S ++ S T +P + + L+I + V ++ AL F+ EN+ E +R +
Sbjct: 253 ISKLQCSTCGHTSNTFEPLIDMSLEI--DNVDSLPSALESFTKVENIDENFRCDNCKEE- 309
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG------RDLLVTP 490
V+ +K + + + LHL RF K+ K + FPL+L L + LV
Sbjct: 310 -VSMEKQLMLDQTPSVAALHLKRFKTNGILVEKIDKHIDFPLELDLQPYTIKVMEDLVAE 368
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
+ KY+L A V H G + GHY R D W DD+ VT + VL +AY+L
Sbjct: 369 NDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVTKVSVDSVLSQEAYIL 428
Query: 551 FYKQ 554
FY +
Sbjct: 429 FYAR 432
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 157/361 (43%), Gaps = 38/361 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + P ++ LL E DI A + S
Sbjct: 485 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQV----- 539
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + D + S ++ ++ F P Q+DAQEFL ++++ +H++
Sbjct: 540 ----IQELWENDGDHVVNTSSLKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLHED 590
Query: 322 L----LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ +K Q T I + + + AE W+ S + D+F GQ
Sbjct: 591 VNRVTVKPQPIHTDIPDSYSDSMKAAE--SWKRYLRSEDSTIV-----------DVFVGQ 637
Query: 378 LKSVVKAQ-GNKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNA 435
L+S ++ + S T+ PF L L I S + + L F+ E L+G +
Sbjct: 638 LRSSLRCTVCDHVSVTLDPFWDLSLPIPSRSGTVRLNQCLEHFTREEVLDGDEKPTCSKC 697
Query: 436 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ KS IQ KIL++HL RFS + KL V FPL L P +G
Sbjct: 698 QMRRKCTKSFAIQKFPKILVIHLKRFSPMERFRGKLSVLVDFPL-TGLELSAFAAPRVQG 756
Query: 495 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L H G S GHYTA ++ ++ +W ++D+ VT + V+ +AYVLFY+
Sbjct: 757 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFYE 815
Query: 554 Q 554
Q
Sbjct: 816 Q 816
>gi|348504876|ref|XP_003439987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Oreochromis niloticus]
Length = 369
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 161/374 (43%), Gaps = 66/374 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135
Query: 323 LKLQGESTSINGA---NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L+ + + NG N +V+ E E NK+ P+ + DIF G L
Sbjct: 136 LQEEKKQEKQNGRLKNNGTVVTTEAETE-------NKTE--------PTWVHDIFQGTLT 180
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 293
Query: 495 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 352
Query: 545 -----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 353 ISKNSESGYILFYQ 366
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 161/362 (44%), Gaps = 67/362 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
GL N GN C++N+ +Q+L+ P F L Q+L T G P + +FD
Sbjct: 203 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLETLHGEWGGKPNV--------NFDAVI 254
Query: 261 GGSSKKKNISVLDIGRPF-SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ K L RP +P F LK F + RQEDA E+L F+++ +
Sbjct: 255 AMQNFAKR--SLQGTRPTNAPQEFNRNLKAFAKPLRQG-----RQEDAHEYLRFLLEALQ 307
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L + A SL +D + RT + + +FGG+L+
Sbjct: 308 QACL------------SRAPKSLKPDD-----------PIRRT-----TFVQKMFGGKLR 339
Query: 380 SVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
S V + S T PF+ L LD+ + ++++ DA R F A ++L G Y+
Sbjct: 340 SRVTCHNCSHNSDTFDPFMDLSLDV-RKGINSLTDAFRAFVAKDHLTGSEKYKCDKCKRK 398
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
V A K I++ L +HL RF+ +G K+ + + F L + L +E
Sbjct: 399 --VDATKQFTIESCPPALTVHLKRFTAFGG----KISRQISFDESLNIAPYL-----SEN 447
Query: 495 R---KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-AYVL 550
R +Y+L A V H+G P+ GHY A + +W DD+ V+ IG ++DQ AY+L
Sbjct: 448 RGPVRYKLYAAVHHYGSGPNSGHYVASVKAPCGKWTRMDDSHVSEIGRGGPVNDQSAYIL 507
Query: 551 FY 552
FY
Sbjct: 508 FY 509
>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
max]
Length = 369
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 162/385 (42%), Gaps = 54/385 (14%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF + L E + I L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+F+++++ D +L+ + ++ + + E GPKN A + L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNGPKNGQANGVHKEPL 165
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + F G L + + Q +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKL 283
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 339 QTFFGSSQEYSSNTDHGYILFYESL 363
>gi|189083712|ref|NP_001121110.1| ubiquitin carboxyl-terminal hydrolase 21 [Rattus norvegicus]
gi|226751948|sp|B2GUX4.1|UBP21_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|183986536|gb|AAI66443.1| Usp21 protein [Rattus norvegicus]
Length = 565
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 162/374 (43%), Gaps = 53/374 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
E T + K + +Q +IL+LHL RFS K V FPLQ L L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 489
Query: 483 G---RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
G D + +P Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 490 GDFASDKVGSPV-----YQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSE 542
Query: 540 SKVLHDQAYVLFYK 553
++V + YVLFY+
Sbjct: 543 NQVASSEGYVLFYQ 556
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 166/376 (44%), Gaps = 55/376 (14%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT----AF 249
KS++ L+ GL N GN CF+N+ LQ L + ELR + L +
Sbjct: 53 KSLQGLV--GLRNLGNTCFMNSILQCLSN-------TLELRDYCLRNCHITDLNNNCRSN 103
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F + N P SPS F ++ P Q+DAQE
Sbjct: 104 TALIEEFAKLTQSLWTSAN------NEPISPSEFRNQVQRCAPKFVGC-----NQQDAQE 152
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQSF 365
FL F++D +H+E+ ++ + + LA++++ W + S V
Sbjct: 153 FLRFLLDGLHNEVNRV---TVRPKVSVLDFDHLADDEKGRRMWNMYLAREDSKVV----- 204
Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSEAVH--TIEDALRLFSAPE 422
D+F GQLKS + +TV PF L + I + T++D LRLF+ +
Sbjct: 205 ------DLFVGQLKSSLTCTACGFRSTVFDPFWDLSIPIAQKISGEVTLKDCLRLFTKED 258
Query: 423 NLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
L+G R + T K IQ +IL+LHL RFS + ++KL V FPL+ +
Sbjct: 259 VLDGEERPTCTKCKARRKCTKRFSIQKFPQILVLHLKRFSDSNVRASKLSTYVNFPLKDL 318
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND----QWLHFDDASVTAI 537
R+ PS E Y L A H G + GHYTA Y + +W ++D+ V+ +
Sbjct: 319 DLREFASEPS-ERPVYNLYAVSNHSG-NALGGHYTA---YCKNPALGEWYSYNDSRVSPM 373
Query: 538 GTSKVLHDQAYVLFYK 553
+S+V AYVLFY+
Sbjct: 374 SSSQVRSSNAYVLFYE 389
>gi|126310809|ref|XP_001371948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Monodelphis
domestica]
Length = 564
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 162/385 (42%), Gaps = 74/385 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CFLNA LQ L S P LR RD + PSGG
Sbjct: 211 GLRNLGNTCFLNAVLQCLSSTRPLRDFC--LR-RDF----------------RLEVPSGG 251
Query: 263 SSKKKNISVL----------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
++++ D +P+ F V + + P S SG Q+DAQEFL
Sbjct: 252 RTQQELTEAFADVLGALWHPDSCEAVNPTRFRTVFQKYVP----SFSGY-SQQDAQEFLK 306
Query: 313 FIMDQMHDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNK 356
+M+++H E+ + + I GA L+++D+ W+ +
Sbjct: 307 LLMERLHLEINRRGRRAPPILTDTPAPSLPRRGGALLEEPELSDDDQANLMWKRYLDRED 366
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTI 411
S + D+F GQLKS +K Q S T + F L L I ++ ++
Sbjct: 367 SKIV-----------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSL 415
Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
D LF+ E LE T + K + +Q +IL+LHL RFS S+GS K
Sbjct: 416 RDCFSLFTKEEELESENAPVCDRCRQRTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKK 474
Query: 471 HK-SVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLH 528
V FPLQ L LG + A Y+L A H G GHYTA R W
Sbjct: 475 SSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRG-QTGWHV 530
Query: 529 FDDASVTAIGTSKVLHDQAYVLFYK 553
++D+ V+ + ++V + YVLFY+
Sbjct: 531 YNDSRVSPVSENQVASSEGYVLFYQ 555
>gi|442753601|gb|JAA68960.1| Putative ubiquitin-specific protease [Ixodes ricinus]
Length = 400
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 174/394 (44%), Gaps = 64/394 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK ++ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 79 NQKKKTGTI-------APKKFIARLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 126
Query: 323 L---KLQGESTSINGANTALVSLAEED--------EWETVGPKNKSAV-----TRTQSF- 365
+ QG+S + ++ S +++ T+G N++ T+ QS
Sbjct: 127 QAEKQTQGQSNAKGNKCSSATSASDQQGSHTPQQQTTTTLGAPNQATATAAAGTQPQSNP 186
Query: 366 -----LPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
P+ + DIF G L + + S+ + FL L +D+ +I LR FS
Sbjct: 187 QPHKPEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFS 244
Query: 420 APENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRF 476
E L ++ A+K ++++ L IL LHL RF Y Q + TKL V F
Sbjct: 245 NTETLCSEHKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVF 304
Query: 477 PLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDD 531
PL+L L L + +++ R Y+LVA V H G P++GHY + + + WL FDD
Sbjct: 305 PLELRLFNKLRLFNTSDDAFNPDRMYDLVAVVIHCGSGPNRGHYISIVKS-HGLWLLFDD 363
Query: 532 ASVTAIGTSKV------------LHDQAYVLFYK 553
V I + + + Y+LFY+
Sbjct: 364 DIVDKIDAAAIEDFYGLTSDTPKTSESGYILFYQ 397
>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
Length = 666
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 160/379 (42%), Gaps = 68/379 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + ++ + LT S
Sbjct: 323 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN-KRTKETLLTCLADLFY-----SIA 376
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 377 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 424
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL----------PSALSD 372
L E GA T+ G KN + L P+ + +
Sbjct: 425 L---AERNQAKGAGTS-------------GSKNAGTIGGGGGSLNGDNPGQPQEPTWVHE 468
Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 469 IFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFK 526
Query: 432 TGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDL 486
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 527 CDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDD 586
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-- 544
V P R Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 587 AVNPD---RLYDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDFY 642
Query: 545 ----------DQAYVLFYK 553
+ Y+LFY+
Sbjct: 643 GLTSDIQKSSETGYILFYQ 661
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN F+N+ LQ L + LQ L RD+ A V +F
Sbjct: 11 GLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 61
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 62 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 112
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 113 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 162
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 163 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 220
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 221 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 279
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 280 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 338
Query: 552 YK 553
Y+
Sbjct: 339 YE 340
>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42-like [Cavia porcellus]
Length = 1224
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 139/354 (39%), Gaps = 60/354 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L +P +L + G+ + ++ G
Sbjct: 108 GLQNLGNTCFANAALQCLTYTAPLANYMLSHEHSETCHAEGFCMMCIMQDHITQALNNPG 167
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + + +F QEDA EFL +D M +
Sbjct: 168 -----------DVIKPMFVINEMQRIASHFQIG---------EQEDAHEFLQHTVDAMQE 207
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L E A T + +FGG L+S
Sbjct: 208 ACLSGSNELDRHTQATTLIC-------------------------------QVFGGYLRS 236
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-V 438
V+ K S T P+L + L+I + TI +AL F PE L+G + V
Sbjct: 237 RVQCLNCKGVSDTFDPYLDITLEI--KGARTINEALAQFVKPEQLDGENCYQCSKCKIMV 294
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K+ I S +LIL L RFS + G K+ K V++P L + R + P+ E Y
Sbjct: 295 PASKNFTIHQSSNVLILSLKRFSNSTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIVYT 351
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G + GHY + N W +D+ V+ T VL QAYVLFY
Sbjct: 352 LYAVLIHAGYNCRVGHYLCHVKASNGLWYQMNDSKVSPSDTESVLSQQAYVLFY 405
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 164/364 (45%), Gaps = 47/364 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S NT + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVTARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + +TV PF L L I Y E T+ D +RLF+ + L+G +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 434 NAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
+ K+ +K IQ KIL+LHL RFS ++KL V FPL+ + R+ +
Sbjct: 479 HCRA--RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLRE-FASE 535
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYV 549
+ Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+
Sbjct: 536 NTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYL 594
Query: 550 LFYK 553
LFY+
Sbjct: 595 LFYE 598
>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
Length = 1118
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRAFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|115640606|ref|XP_784858.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8
[Strongylocentrotus purpuratus]
Length = 1187
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 159/366 (43%), Gaps = 53/366 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + +P + + + +DI +A +G G
Sbjct: 851 GLRNLGNTCFMNSVVQCLSNTTPLAKYFITDDYLQDINRANP------LG--------RG 896
Query: 262 GSSKKKNISVLDIG-----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
G ++ V+ R +P + + P+ + D+QEFL F++D
Sbjct: 897 GEVAEEFAVVVRANWSGQYRSIAPRDLRDTVTKYVPEFRKHVG---HHHDSQEFLLFLLD 953
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEED-------EWETVGPKNKSAVTRTQSFLPSA 369
+H++L +++ + EED E + +N + R S
Sbjct: 954 GLHEDLNEVKKRQY-----------IKEEDFSKYPDHEAAGLSWRNHEKLNR------SI 996
Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
+ +F GQ KS V+ N S + F+ L L I S++ ++ + L+ FS PE L G
Sbjct: 997 IVSLFQGQFKSTVRCLSCNNKSVKFEAFMYLSLPIASKSKCSLHECLQQFSKPEELTGDN 1056
Query: 429 -TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 487
T T G ++K++ I L IL++HL RF Y KL +V FP L + R
Sbjct: 1057 ATHCTHCKGNRKSEKTILIWKLPHILLIHLKRFYYEGMWRQKLQTNVDFPNDLTMDR--Y 1114
Query: 488 VTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQ 546
V A+ Y+L V++H GHYTA R N +W +DD V S +
Sbjct: 1115 VIGPAQRNIYQLYG-VSNHSGTLDGGHYTACCRNAVNKRWYKYDDHEVYDASKSSIKSSA 1173
Query: 547 AYVLFY 552
AY+LFY
Sbjct: 1174 AYILFY 1179
>gi|67972114|dbj|BAE02399.1| unnamed protein product [Macaca fascicularis]
Length = 331
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 16/253 (6%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 79 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA- 137
Query: 363 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 138 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 187
Query: 422 ENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
E L + R + + K ++I L +L++HL RFSY + KL SV FPL+
Sbjct: 188 EKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDDRWKQKLQTSVDFPLEN 247
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGT 539
+ ++ P +KY L + H+G GHYTA + Q W FDD V+ I
Sbjct: 248 LDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISV 306
Query: 540 SKVLHDQAYVLFY 552
S V AY+LFY
Sbjct: 307 SSVKSSAAYILFY 319
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 151/366 (41%), Gaps = 61/366 (16%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
KD P GL+N GN CF N LQ L P L E R+ + F +F
Sbjct: 183 KDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRN------ECVRDDWCFFCEF 236
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
T +S+ +PFSP+ L N ++ G RQEDA EF+ F +D
Sbjct: 237 QTHVERASQN--------AQPFSPNNIILRLPNIGGNL-----GYGRQEDAHEFMRFAID 283
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+M LA DE+ G K A +R + + IFGG
Sbjct: 284 RMQ----------------------LACLDEFG--GEKAVCAHSRETTIIQH----IFGG 315
Query: 377 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
QL+S V+ N S + + L ++I+ +A ++E+ L F+ E L G + G
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAA-SLEECLDQFTKIEWLHGDNKYKCDGC 374
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
V A K + I+ IL + L RF G G KL+K V FP L DL S G
Sbjct: 375 NDYVKASKRLTIKQAPNILTIALKRFQSGRFG--KLNKKVAFPETL----DLSPYMSEAG 428
Query: 495 RK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
+ Y L A V H + GHY + F+ W DD V + +VL AY+
Sbjct: 429 DRKDVYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYM 488
Query: 550 LFYKQV 555
+ Y +V
Sbjct: 489 ILYSRV 494
>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Sus scrofa]
Length = 517
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 160/415 (38%), Gaps = 95/415 (22%)
Query: 146 GHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLI 205
G PSP S+ LC+ D + ++ VP K P+ ++ GL
Sbjct: 38 GPEKPSPSSQ--ALCNQQADA---------APVAAVGPVPTKG---PLSWRPSVVGAGLQ 83
Query: 206 NSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSS 264
N GN C++NA LQ L P + LL R K + L A V+
Sbjct: 84 NLGNTCYVNAVLQCLTHTPPLAISLLNGQHQRACQKQPFCMLCAVRAHVTR--------- 134
Query: 265 KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK 324
++L G P + ++ +F R RQEDA EFL F +D M +
Sbjct: 135 -----ALLHPGDVIQPR--KDLVASFH---------RHRQEDAHEFLMFALDAMQ----R 174
Query: 325 LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA 384
E T I IFGG +S ++
Sbjct: 175 CPSEDTLIQ--------------------------------------QIFGGCWRSQIQC 196
Query: 385 -QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK-- 441
+ S T P+L + LDI A ++E ALR E L+G + + GV K
Sbjct: 197 LRCLGVSDTFDPYLDVTLDI--TAAQSVEQALRELVKAEKLDG---ENAYHCGVCLRKGP 251
Query: 442 --KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
K + + SK+LIL L RF+ K+ K VR+P L L + L A YEL
Sbjct: 252 ATKRLTLHRASKVLILVLKRFT--DVTGDKMDKKVRYPEHLDL-QPYLSVQKAGALDYEL 308
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G +GHY R N W DD+ VTA T+ L AYVLFY Q
Sbjct: 309 FAVLVHSGWTCHQGHYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFYIQ 363
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 162/363 (44%), Gaps = 54/363 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L + +ELR + + +V D S
Sbjct: 269 GLRNLGNTCFMNSILQCLSNT-------RELRDYCLHRL----------YVRDLHHGSNA 311
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ + S ++ SPS F+ ++ + P Q+DAQEFL F++D +H+E+
Sbjct: 312 HTALREASPNEV---VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEV 363
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
++ S N + +DE K + + S + D+F GQLKS +
Sbjct: 364 NRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSL 413
Query: 383 KAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAG 436
+TV PF L L I Y E T+ D +RLF+ + L+G + + G
Sbjct: 414 TCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCRG 471
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 472 RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHAV 530
Query: 497 YELVATVTHHGRDPSKGHYTADARYFN------DQWLHFDDASVTAIGTSKVLHDQAYVL 550
Y L A H G GHYTA Y N +W F+D+SVT + +S+V AY+L
Sbjct: 531 YNLYAVSNHSGTT-MGGHYTA---YSNCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLL 586
Query: 551 FYK 553
FY+
Sbjct: 587 FYE 589
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 153/365 (41%), Gaps = 67/365 (18%)
Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
+P GLIN GN C+ N LQ L S P LL + + G+ + V
Sbjct: 112 VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACQREGWCFMCELEDHVQ---- 167
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+ PFSP + L++ + NS+ G RQEDA EF+ +D M
Sbjct: 168 -----------KAFNNQMPFSPIKILSRLRS----IGNSL-GYGRQEDAHEFMRLAVDCM 211
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
L G T+++ RTQ + + IFGG L
Sbjct: 212 QKICLDEAGGETTLDA--------------------------RTQE--TTLIQHIFGGYL 243
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 434
+S VV Q + S + L L + I V ++EDAL+ F++PE L+G YR
Sbjct: 244 QSQVVCCQCQQRSNLYENMLDLSVGIQGN-VESLEDALKQFTSPEWLDGDNKYRCDRCN- 301
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL---LVTPS 491
V AKK + + IL + L RF G G K++K V FP +L + + + TP
Sbjct: 302 -AYVRAKKRLSVHEAPNILTIALKRFQGGKFG--KINKKVTFPEELDMVPYMSGTVDTPP 358
Query: 492 AEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
A Y+L A V H + GHY R N W DD+ V + +V+ +AY+
Sbjct: 359 A----YKLYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVKEVDQIRVMSQKAYM 414
Query: 550 LFYKQ 554
L Y++
Sbjct: 415 LLYRR 419
>gi|426259087|ref|XP_004023133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ovis aries]
Length = 533
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 164/448 (36%), Gaps = 118/448 (26%)
Query: 145 GGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGS--------KEVPMKAINEPVKSV 196
GG A P+P F+VL G C +S +G+ E P A+ P +
Sbjct: 19 GGGACPAP---FNVLAGGQ---------GCRASAAGADAPRGPSVPEGPSPAVGRPQRG- 65
Query: 197 KDLLP----------------------RGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
DL P GL N GN C++NA LQ L P L +
Sbjct: 66 -DLAPGSAGLAPGQKVALSWRGPWGVGAGLQNLGNTCYVNAALQCLSHTPPLASWLVSRQ 124
Query: 235 TRDI-PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD 293
+ P G TL A V+ ++L G P +L F
Sbjct: 125 HATLCPAGGSCTLCAMRAHVTR--------------ALLHAGEVIRP--HRDLLAGFH-- 166
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGP 353
R +QEDA EFL F + M L S A ED
Sbjct: 167 -------RHQQEDAHEFLMFTLSGMQQGCLSASQPSGH-----------ASEDT------ 202
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE 412
S + IFGG +S ++ S T P+L + LDI A ++E
Sbjct: 203 --------------SVVRQIFGGTWRSQIQCLHCLGVSDTFDPYLDISLDI--TAAQSVE 246
Query: 413 DALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 471
ALR PE LE G V A K + + + S++L+L L RF+ S K
Sbjct: 247 QALRELVKPEKLEAENAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTQLS--GAKRA 304
Query: 472 KSVRFPLQLVLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFNDQW 526
+ VR+P + L V P RK Y L A + H G +GHY R N QW
Sbjct: 305 QEVRYP------QCLDVQPYTSERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQW 358
Query: 527 LHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
DDA VTA + L AY+LFY +
Sbjct: 359 YKMDDAKVTACDETAALSQSAYILFYAR 386
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 151/366 (41%), Gaps = 61/366 (16%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
KD P GL+N GN CF N LQ L P L E R+ + F +F
Sbjct: 183 KDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRN------ECVRDDWCFFCEF 236
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
T +S+ +PFSP+ L N ++ G RQEDA EF+ F +D
Sbjct: 237 QTHVERASQN--------AQPFSPNNIILRLPNIGGNL-----GYGRQEDAHEFMRFAID 283
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+M LA DE+ G K A +R + + IFGG
Sbjct: 284 RMQ----------------------LACLDEFG--GEKAVCAHSRETTIIQH----IFGG 315
Query: 377 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
QL+S V+ N S + + L ++I+ +A ++E+ L F+ E L G + G
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAA-SLEECLDQFTKIEWLHGDNKYKCDGC 374
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
V A K + I+ IL + L RF G G KL+K V FP L DL S G
Sbjct: 375 NDYVKASKRLTIKQAPNILTIALKRFQSGRFG--KLNKKVAFPETL----DLSPYMSEAG 428
Query: 495 RK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
+ Y L A V H + GHY + F+ W DD V + +VL AY+
Sbjct: 429 DRKDVYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYM 488
Query: 550 LFYKQV 555
+ Y +V
Sbjct: 489 ILYSRV 494
>gi|443718172|gb|ELU08917.1| hypothetical protein CAPTEDRAFT_127326, partial [Capitella teleta]
Length = 363
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 163/370 (44%), Gaps = 53/370 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
GL+N GN C+ N+ LQAL C PF + L + R+ K T A D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREQVLSYKQHMRNSKKETLLTCLA--------DLFH 76
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
+++KK + + +P F L+ N + Q+DA EFL+++++ + D
Sbjct: 77 NIATQKKKVGTI------APKKFIQRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD 125
Query: 321 ELLKLQGESTSINGANTA-LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
LQGE+ + G A V+ A +KS P+ + +IF G L
Sbjct: 126 ---LLQGENKQLKGGGKANAVNGATNHHQGNFHDNSKSD--------PTWVHNIFQGTLT 174
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
+ + S+ + FL L +D+ E +I LR FS+ E L Y+
Sbjct: 175 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSSTETLCSEYKYYCEVCCSK 232
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
A+K ++++ L IL LHL RF Y Q + TKL V FPL+L L + S R
Sbjct: 233 QEAQKRMRVKKLPHILALHLKRFKYMEQLNRYTKLSYRVVFPLELRLF-NTSDDASNPDR 291
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH----------- 544
Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 292 LYDLIAVVIHCGTGPNRGHYISIVKS-HGLWLLFDDDIVDKIEVSAIEEFYGMTSDLQKS 350
Query: 545 -DQAYVLFYK 553
+ Y+LFY+
Sbjct: 351 SESGYILFYQ 360
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 165/404 (40%), Gaps = 91/404 (22%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 253
KS K+ GL N GN CF+N LQ+ + S F + L ++ P L
Sbjct: 236 KSTKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQM----------PCLEGIA--- 282
Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-----GR------- 301
FD +G + + I + GR SM +A+L V +S G+
Sbjct: 283 --FDESTGPPTHRGRI--VTPGRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECL 338
Query: 302 --------PR-----QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
PR Q+DA EFL++++D++H ELL+L L L
Sbjct: 339 FLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQL-------------LPRLGH---- 381
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---- 403
E +G + K ++ ++ +FGG L SVV + S T +PF L LDI
Sbjct: 382 EPLGLRGKQSI----------VTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRL 431
Query: 404 ------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILH 456
E V ++ +L F E L N G + K I L +L LH
Sbjct: 432 QRSRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLH 491
Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--------YELVATVTHHGR 508
+ RF + + +K+ V FP++ L G + Y+L A + HHG
Sbjct: 492 IKRFRWCNSYRSKVDTQVDFPME-SLDMSAFTVRGVTGTRLGAQNSHLYDLAAVIVHHGS 550
Query: 509 DPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
GHYTA A + + QW HF+D+SV T V + Y+LFY
Sbjct: 551 GAGTGHYTAFAVH-DGQWFHFNDSSVRPATTDAVAKCKPYILFY 593
>gi|47219352|emb|CAG10981.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 160/374 (42%), Gaps = 66/374 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 320
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 321 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
E K + ++ + TA+ + AE D NK+ T + DIF G L
Sbjct: 137 QEEKKQEKQNGRLKNNGTAVATEAETD--------NKAEST--------WVHDIFQGTLT 180
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 293
Query: 495 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 352
Query: 545 -----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 353 ISKNSESGYILFYQ 366
>gi|145340661|ref|XP_001415439.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575662|gb|ABO93731.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
Q+DA EF+ F++D++ EL + + NG L + + P+ K +
Sbjct: 49 QQDAHEFMRFLLDRLRKELSSGKHAGSQTNGLKGGLSPTSPKT------PQGK--CEQDD 100
Query: 364 SFLPSALSDIFGG-QLKSVVKAQGNKASATVQPFLLLHLDI----------------YSE 406
+ +IFGG + +V + ++S +PF+ L L I E
Sbjct: 101 GVTGDKIMEIFGGVAVTTVTCMKCERSSERREPFMDLSLPIPPVVGKNGSIEEGEGPNGE 160
Query: 407 AVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
A T++ L F E L G+ R G V +A KS +I L +L LHL RF++ G
Sbjct: 161 A--TLQQCLAAFVRNETLSGHGRYFCDGCGKVQSATKSTRIAKLPPVLCLHLKRFTWKGH 218
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARY 521
TKL V FPL DL + P E Y+LVA VTHHG + GHYTA AR
Sbjct: 219 AMRTKLTHDVDFPLD-----DLDLAPYCETNGEAMYDLVAVVTHHGLNAGSGHYTACARE 273
Query: 522 F----NDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
F N W HF+D V ++ +V Q Y+ Y +
Sbjct: 274 FTAEGNSDWQHFNDDDVNSLTAEEVRTGQGYIFLYAR 310
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 153/364 (42%), Gaps = 67/364 (18%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
+ PRGL+N GN C+ NA LQ L S P V LL ++ + +
Sbjct: 466 IYPRGLLNCGNSCYANAVLQCLTSTKPLVIYLLYRSHSKACCAKDWCLMCEL-------- 517
Query: 258 TPSGGSSKKKNISVL-DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+++I +L + G P SPS +++ N G QEDA EFL ++
Sbjct: 518 --------EQHIMILRENGAPLSPSRILWHMRSI-----NCHMGEGSQEDAHEFLRLLIA 564
Query: 317 QMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
M L+ L GE + V P+ + + + FG
Sbjct: 565 SMQSICLEGLGGE--------------------KKVDPRIQET---------TFIQHTFG 595
Query: 376 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
G+L+S VK N S + + L L+I V ++EDAL F++PE+L+G G
Sbjct: 596 GRLQSKVKCLNCNHESERYENIMDLTLEILG-WVESLEDALTQFTSPEDLDGENMYRCGR 654
Query: 435 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
V A+K + I IL + L RF G G K++K + FP L D++ +
Sbjct: 655 CTSYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEML----DMIPFMTGT 708
Query: 494 GR---KYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAY 548
G Y L A V H + GHY + + W DDA V + ++V+ + AY
Sbjct: 709 GDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPVLINQVMSEGAY 768
Query: 549 VLFY 552
+LFY
Sbjct: 769 ILFY 772
>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 775
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 167/407 (41%), Gaps = 93/407 (22%)
Query: 173 ACNSSISGSKEVPMKAINEPVKSVKDLLPR--------------GLINSGNLCFLNATLQ 218
A N S + +K P K +K + L R GL N GN CFLN+ LQ
Sbjct: 136 ALNESQTAAKSTPTKKYQSELKVQQSLYTRSIDLSWPAGIVHGSGLFNQGNTCFLNSALQ 195
Query: 219 ALMSCSPFVQLLQ-----ELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLD 273
L+ P +++L E R K+G+ A SD S KK
Sbjct: 196 CLLHTPPLLRILMAHTKAECRV----KSGFCMSCAMQEVSSD-------SFKK------- 237
Query: 274 IGRPFSPSMFEAVLKNFTPDVPNSISG---RPRQEDAQEFLSFIMDQMHDELLKLQGEST 330
GR F+P + +N NSI+ + RQEDA EFL + +D + + +
Sbjct: 238 -GRAFTPL---PITRNL-----NSIAKHLRKGRQEDAHEFLRYAIDSL---------QKS 279
Query: 331 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKA 389
+ G + E W + IFGGQL+S V Q
Sbjct: 280 CLAGYPPKIDHKLAETTW---------------------VHKIFGGQLRSRVTCQQCGYN 318
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKI 446
S T L L +DIY+ + +++AL+ F+A + L+G Y+ V A+K I
Sbjct: 319 SDTFDSILDLSIDIYN--ISGLKEALKKFTAKDYLKGADKYKCEKCKRP--VNAEKQFTI 374
Query: 447 QTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHH 506
+L +HL RF+ + KL +R+ VL ++ G Y+L ++H
Sbjct: 375 HEAPAVLTVHLKRFTPMGR---KLQHPIRY--DEVLSLQPAMSEGQHGPTYKLYGVISHM 429
Query: 507 GRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-DQAYVLFY 552
G P+ GHY A R + QW +D SV + + L+ AY+LFY
Sbjct: 430 GGGPNSGHYFAHVRGGDGQWYEMNDDSVERVHKPEPLNMKNAYMLFY 476
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 39/293 (13%)
Query: 278 FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGAN 336
FSP S+F V K +PN G +Q+DA EF+ +++D +H L+LQG NG +
Sbjct: 218 FSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRYLLDHLH---LELQG---GFNGVS 265
Query: 337 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQP 395
+ ++ +E+ T+ NK + + ++ IFGG L++ V S P
Sbjct: 266 RS--AILQENS--TLSASNKCCINGA----STVVTAIFGGILQNEVNCLICGTESRKFDP 317
Query: 396 FLLLHLDIYSE------------AVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKK 442
FL L LDI S+ V ++ D LR F+ E L E + K
Sbjct: 318 FLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 377
Query: 443 SVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YEL 499
IQ L K+L LHL RF + + K+ V FPL+ + + L+ P G + Y+L
Sbjct: 378 KFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDL 437
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A V HHG GHYTA A + +W HF+D++VT V+ +AY+LFY
Sbjct: 438 AAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVVKAKAYILFY 489
>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
Length = 363
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 169/382 (44%), Gaps = 65/382 (17%)
Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
DL P GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A +
Sbjct: 15 DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
+ S + KKK S+ +P F L+ + N + Q+DA EFL
Sbjct: 75 Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115
Query: 312 SFIMDQMHDELL--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
+F+++ +++ +L + G ST A A+ GP ++ T+ P+
Sbjct: 116 NFLINHINEIILAERNTGSSTGKTAAGGAI-----------PGPNAQTNGANTE---PTW 161
Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
+ +IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 162 VHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDN 219
Query: 429 TSSTGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--G 483
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L
Sbjct: 220 KFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNT 279
Query: 484 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV- 542
D V P R Y+L A V H G P++GHY + + + WL FDD V I S +
Sbjct: 280 SDDAVNPD---RLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIE 335
Query: 543 --------LH---DQAYVLFYK 553
+H + Y+LFY+
Sbjct: 336 DFYGLTSDIHKSSETGYILFYQ 357
>gi|302795107|ref|XP_002979317.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
gi|302813882|ref|XP_002988626.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300143733|gb|EFJ10422.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300153085|gb|EFJ19725.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
Length = 369
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 165/381 (43%), Gaps = 49/381 (12%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
K++ D P G L N GN C+ N+ LQAL C PF L E +R +G P
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYSR-TKSSGEPEENL 68
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
F S +S+KK V+ +P F +K N + +DA
Sbjct: 69 LTCLADLF---SQINSQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQDAH 114
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
EFL+F+++++ + L K + +G + AE+ E G N +A + +
Sbjct: 115 EFLNFLLNELVETLEKEAKSGRTASGN----LKPAEKKE---NGVANGTAADQDHPL--T 165
Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
+ IF G L + + + +A + FL L LDI E +I LR FS+ E L
Sbjct: 166 WVHKIFQGFLTNETRCLRCETITARDEKFLDLSLDI--EQNSSITSCLRNFSSTETLNAE 223
Query: 428 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 484
+ + A+K +KI+T +IL LHL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKTPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCN 283
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 543
P +E +Y L A V H G P+ GHY + + + WL FDD +V I + V
Sbjct: 284 TTDDAPGSES-EYSLFAVVVHVGSGPNHGHYVSLVKS-HSHWLFFDDENVEIIDETYVQT 341
Query: 544 -----------HDQAYVLFYK 553
D Y+LFY+
Sbjct: 342 FFGSTQEYSNNTDHGYILFYE 362
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 157/371 (42%), Gaps = 59/371 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N C+ NATLQ L+ P +++ LT G S
Sbjct: 112 GLHNPSMACYANATLQVLLHTPPVLRI---------------ALTHDEGSCSQI------ 150
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 316
KKKN +L + + + K + P + S+S + RQED EF F+ D
Sbjct: 151 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRSLSQIKKGFSKNRQEDTHEFFRFVTD 208
Query: 317 QMHD-ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
+ + L KL + N A + D E + K+ S V R I+G
Sbjct: 209 ALQNTALAKLPKSVLHYHQQNFAHKT--SRDIPEKI--KHTSWVYR-----------IWG 253
Query: 376 GQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
G+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG Y
Sbjct: 254 GRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCER 313
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQLVLGRD 485
A KS KI IL LHL RFS G + K ++ ++F L +
Sbjct: 314 CKRKA--NATKSFKIDQAPPILTLHLKRFSVNYNHYSGRARAEKFNQPIKFEQTLDIA-P 370
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
+V P + G KY L H G + GHYT+ R + QW H DD V+ + +VL+D
Sbjct: 371 YMVNPGSSGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDDVSPVQLVQVLND 430
Query: 546 Q-AYVLFYKQV 555
+ AY+L Y +V
Sbjct: 431 KTAYLLSYIRV 441
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 160/392 (40%), Gaps = 77/392 (19%)
Query: 188 AINEPVKSVKDLL------------------PRGLINSGNLCFLNATLQALMSCSPFVQ- 228
AI+ P+K KD+L P GL+N GN CF N LQ L P V
Sbjct: 151 AISRPIKQAKDVLFSYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAY 210
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LL++ R+ + L F V ++ +S + FSP + L
Sbjct: 211 LLEKGHRRECSCNDWCFLCEFENHV-----------ERTRLS----SQAFSPMNILSRL- 254
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
P++ ++ G RQEDA EF+ F +D M L G ++
Sbjct: 255 ---PNIGGTL-GYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAV---------------- 294
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEA 407
P N T Q IFGG+L+S V+ + NK S + + L ++I+ +A
Sbjct: 295 ----PPNLQETTLIQH--------IFGGRLQSEVICTKCNKISNQYENMMDLTVEIHGDA 342
Query: 408 VHTIEDALRLFSAPENLEGYRT-SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
++E+ L F+A E L+G G V A K + ++ IL + L RF G G
Sbjct: 343 A-SLEECLDQFTARERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRFQSGRFG 401
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK-YELVATVTHHGRDPSK--GHYTADARYFN 523
KL+K + FP L L ++ + +G Y+L V H + GHY + F
Sbjct: 402 --KLNKRISFPETLNLSP--YMSEAGDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFQ 457
Query: 524 DQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
W DD V + +VL AY+L Y +
Sbjct: 458 GNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRC 489
>gi|357614773|gb|EHJ69266.1| hypothetical protein KGM_20368 [Danaus plexippus]
Length = 377
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 162/369 (43%), Gaps = 54/369 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + E + ++ + LT S
Sbjct: 39 GLVNFGNTCYSNSVLQALYFCRPFRDRVLEYKAKN-KRTKETLLTCLADLFY-----SIA 92
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 93 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + +ST + L + D + N S T+ P+ + +IF G L S
Sbjct: 141 LAERNQST---------LKLQKTDGVKENVTCNGSIPQNTE---PTWVHEIFQGTLTSET 188
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-A 440
+ S+ + F L +D+ +I L+ FS E L N A
Sbjct: 189 RCLNCETVSSKDEHFFDLQVDVDQNT--SITHCLKCFSDTETLCNDNKFKCDNCSSYQEA 246
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 247 QKRMRVKKLPLILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 303
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 304 YDLVAVVVHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSS 362
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 363 ETGYILFYQ 371
>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
Carboxyl-terminal Hydrolase 8
Length = 396
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C+ N+ LQ L + + DI ++ +G + G
Sbjct: 64 GLRNLGNTCYXNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 117
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+ D +H
Sbjct: 118 IIXK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLXDGLH 167
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 168 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 216
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F L L + S + T++D LRLFS E L + R +
Sbjct: 217 KSTVQCLTCHKKSRTFEAFXYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 276
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 277 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 336
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 337 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 392
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + P ++ LL E DI + A + S
Sbjct: 641 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIH--- 697
Query: 262 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 698 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 744
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 745 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 795
Query: 380 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 796 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 855
Query: 438 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 494
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 856 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLT---GLDLSAFAAPRVPG 912
Query: 495 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L H G S GHYTA ++ ++ +W ++D+ V+ + V+ ++AYVLFY+
Sbjct: 913 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYE 971
Query: 554 Q 554
Q
Sbjct: 972 Q 972
>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
Length = 306
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 56/344 (16%)
Query: 211 CFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS 270
CFLN LQ ++ P L+ +LR D P P A +GF + N S
Sbjct: 2 CFLNCILQCMVHTVP---LVLKLRKTDHPD---PCPRASIGFCC-----YCSLKQHVNES 50
Query: 271 VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGEST 330
+ G F P +F LK+ + D + + Q+DAQEFL ++D++ DE
Sbjct: 51 IRLSGSSFYPEIFINRLKSISSDFKSGV-----QQDAQEFLRCLLDKL-DE--------- 95
Query: 331 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
+++ P++ + T+ S + +IF G LKS ++ + ++
Sbjct: 96 ------------------DSIAPRSSEESSTTKE--GSVVKEIFRGCLKSQLRCPECDRC 135
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 449
S +PFL L LD+ V T+ DAL+ F+ E ++ + G V+ +K KI+
Sbjct: 136 SDKSEPFLDLSLDL--NMVETLMDALQSFTNTELIKDFMCD--GCKSRVSMEKHFKIEQA 191
Query: 450 SKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-KYELVATVTHHGR 508
++L++HL RF + +K+ V++PL+L + + + KY+L V H G
Sbjct: 192 PEVLVIHLKRF---TNSESKIWDKVKYPLELDINSFMSSSDDVSCSFKYDLYGVVEHLGA 248
Query: 509 DPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
S GHY R W F+D V L + AY+LFY
Sbjct: 249 YGS-GHYVCYIRSSEADWYKFNDDKVYQCSVDSALENAAYLLFY 291
>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
Length = 349
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 160/367 (43%), Gaps = 63/367 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + + PK LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKVLQYKAQ--PKKKETLLTCLS------DLFHSI 76
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 77 ATQKKKVGVI------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTVADLL 125
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ ++ ING + KS P+ + DIF G L +
Sbjct: 126 QAEKQQAKGINGTDN----------------NTKSD--------PTWVHDIFQGTLTNET 161
Query: 383 KAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ + S+ + FL L +D+ + +I LR FS E L Y+ A
Sbjct: 162 RCLCCETVSSKDEDFLDLSVDV--DQNTSITHCLRGFSNTETLCSEYKYYCEMCCSKQEA 219
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
+K ++++ L IL LHL RF Y Q TKL V FPL+L L +A+ + Y+
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSDDAVNAD-KIYD 278
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV------------LHDQ 546
LVA V H G P++GHY + + WL FDD V I + +
Sbjct: 279 LVAVVIHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAHAIEDFYGLTSDIQKTSES 337
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 338 GYILFYQ 344
>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
Length = 369
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 161/385 (41%), Gaps = 54/385 (14%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF + L E T +++ A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKNLADAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFMQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+F+++++ D L K S S ++ A GPK A + L
Sbjct: 113 AHEFLNFLLNELVDILEKEASASKSDPETSSPPEKTAN-------GPKTAQANGVQKEPL 165
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + F G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADSEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESSV 338
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 339 QTFFGSAQEYSSNTDHGYILFYESL 363
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + P ++ LL E DI + A + S
Sbjct: 639 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIH--- 695
Query: 262 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 696 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 742
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 743 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 793
Query: 380 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 794 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 853
Query: 438 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 494
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 854 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPL---TGLDLSAFAAPRVPG 910
Query: 495 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L H G S GHYTA ++ ++ +W ++D+ V+ + V+ ++AYVLFY+
Sbjct: 911 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYE 969
Query: 554 Q 554
Q
Sbjct: 970 Q 970
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N T+ +F+ IFGG L+S
Sbjct: 210 -------QKACLNGSNKL------------------DRHTQATTFV----CQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A T+ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQTVNKALEQFVKPEQLDGENAYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+VTA K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVTASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 154/363 (42%), Gaps = 58/363 (15%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
++ P GLIN GN C+ NA LQ L P +Q L +++ + F +F
Sbjct: 519 EMRPCGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKECVNKEW-------CFTCEF 571
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
++ + + K+ P SP + L+N + G R+EDA EFL + +D
Sbjct: 572 ESLMLKAKEGKS--------PLSPIGILSQLQNIASQL-----GTGREEDAHEFLRYAID 618
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK G +N AL S EE + + FGG
Sbjct: 619 TMQSVCLKEAG----VN----ALGSFEEE---------------------TTLIGLTFGG 649
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
L+S +K + + S + + L ++I + + +EDALR F+ E L+G G
Sbjct: 650 YLRSKIKCMKCHYKSERHERMMDLTVEIEGD-IEKLEDALRRFTGTEILDGDNKYQCGRC 708
Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
AKK + I +L + L RF G G KL+KS+RFP L L + T S +
Sbjct: 709 KSYEKAKKKLTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLAPYMSGT-SDKS 765
Query: 495 RKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L V H GHY + ++W DD++VTA+ +VL AY+L Y
Sbjct: 766 PIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTAVELERVLTKGAYMLLY 825
Query: 553 KQV 555
+
Sbjct: 826 ARC 828
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 158/358 (44%), Gaps = 36/358 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT-LTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + L++ R+ + A + +F
Sbjct: 63 GLRNLGNTCFMNSILQCLSN----THDLRDYCLRNTHRTDLNNNCRAKAALMDEF----- 113
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + I SPS F+ ++ + P Q+DAQEFL F++D +H+E
Sbjct: 114 -AKLTQTIWTSASNEAISPSDFKMQIQKYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 167
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ ++ +S A + EDE K K + S + D+F GQLKS
Sbjct: 168 VNRVTVKSR----APVEDLDHLSEDE------KGKRMWNKYLESEDSKVVDLFVGQLKSS 217
Query: 382 VKAQGNKASATV-QPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
+ +TV PF L L I + ++ D LRLF+ + L+G + T
Sbjct: 218 LTCSECGFCSTVFDPFWDLSLPIAKTSGEVSLNDCLRLFTKEDVLDGNERPTCHRCK--T 275
Query: 440 AKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+K K IQ KIL+LHL RFS ++KL V FPL+ + R+ S
Sbjct: 276 RRKCTKKFTIQKFPKILVLHLKRFSECRVRTSKLSTFVNFPLKELDLREFASDNSVNA-V 334
Query: 497 YELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H G GHYTA R +W ++D+ V+ + +S+V AYVLFY+
Sbjct: 335 YNLYAVSNHTGTSLG-GHYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYE 391
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S NT + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVIARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLRE-FASENT 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 366
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 163/379 (43%), Gaps = 65/379 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTLTAFVGFVSDFDTPS 260
GL N GN C+ N+ LQAL C PF QLLQ + ++I A LT S
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKNITDAEENLLTCLAELFSQI---- 79
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
SS+K+ V+ +P F LK N + +DA EFL+++++++ D
Sbjct: 80 --SSQKRKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAHEFLNYLLNELVD 126
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETV--------GPKNKSAVTRTQSFLPSALSD 372
+L+ + AE+D+ T+ GPK+ A ++ L + +
Sbjct: 127 -ILEREAH--------------AEKDDQGTLLPSEKIANGPKSGLANGAKKAPLATWVHK 171
Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTS 430
F G L + + Q +A + F L LDI E +I L+ FS+ E L +
Sbjct: 172 NFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFF 229
Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLV 488
+ A+K +KI+ ++L++HL RF Y Q KL V FPL+L L
Sbjct: 230 CDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSD---- 285
Query: 489 TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL----- 543
T +Y L A V H G P+ GHY + N WL FDD +V + + V
Sbjct: 286 TDEEADIEYSLFAVVVHVGSGPNHGHYVCLVKNHN-HWLCFDDETVEVVDEASVQTFFGS 344
Query: 544 -------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 345 TQDFNNNTDHGYILFYESI 363
>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 160/412 (38%), Gaps = 77/412 (18%)
Query: 155 KFHVLCDGNIDGRDQNAAACNSSISGSKEV--PMKAINEPVKSVKDLLPRGLINSGNLCF 212
K ++L +G +D D SI K V P+ IN V+ + P GL N GN CF
Sbjct: 51 KSNLLTNGKVDASD--------SIPSPKFVLYPIDKINTQWTRVRRMGP-GLSNLGNTCF 101
Query: 213 LNATLQALMSCSPFVQLL--QELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS 270
LN+ +Q L +P V L QE TR+ G+ +
Sbjct: 102 LNSVVQVLTYTAPLVNYLATQE-HTRECQMVGFCMMCELQR------------------- 141
Query: 271 VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR---QEDAQEFLSFIMDQMHDELLKLQG 327
I R F+ E++ SI+ R QEDA EFL +++D M L Q
Sbjct: 142 --HILRTFNHQQNESIKPLCIIQRLRSIAKHLRFGHQEDAHEFLRYVIDGMQKSCLAGQP 199
Query: 328 ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QG 386
E T +V IFGG +S V+ +
Sbjct: 200 EKMDRYSKETTIVH------------------------------GIFGGYYRSQVQCLKC 229
Query: 387 NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKS 443
+ S T P + + +DI ++ A++ E L+G Y+ V A K
Sbjct: 230 HNTSNTFDPLMEIMVDIKHSP--SVVRAIQRMCKAELLDGDNLYQCPRCKKK--VPAHKQ 285
Query: 444 VKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATV 503
V I IL + L RF Y K+ K + + L L R + P KY+L +
Sbjct: 286 VLIHRPPNILTIQLKRFDYHHMFGGKVSKEITYTEHLDL-RPFMTNPKGPPLKYKLYGVL 344
Query: 504 THHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
H G + GHY R ND W + +D+ V +G + VL QAY+LFY +V
Sbjct: 345 VHSGYSCNSGHYYCYVRGSNDCWYNMNDSMVRQVGLNTVLAQQAYLLFYSRV 396
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 152/367 (41%), Gaps = 70/367 (19%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
P GL N GN C+LN+ LQ L P L+ + D+ +
Sbjct: 27 PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSL-----------------CDSVA 69
Query: 261 GGSSKKKN-ISVLD--IGRPFS-------PSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
G K+ +L+ I R S P+ ++ LK F RQEDA EF
Sbjct: 70 NGDRKRDCPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFRCG-----RQEDAHEF 124
Query: 311 LSFIMDQMHDELLKLQG-ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
L +++D H+ L+L+ I VS+ +E
Sbjct: 125 LRYVIDACHNTCLRLKKLRRKGIENGGGGGVSVVKE------------------------ 160
Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 426
IFGG L+S VK N S V + + LD+ + +++ DA++ F PE L+G
Sbjct: 161 ---IFGGALQSQVKCLCCNYESNKVDEIMDISLDVLNS--YSVRDAMQKFFQPEVLDGNN 215
Query: 427 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
Y+ +V A+K + I +L++ L RF G G+ K+ K++ F LVL
Sbjct: 216 KYKCEKCQK--LVAARKQMSILQAPNVLVIQLKRFE-GIFGA-KIDKAIAFEEVLVLSSF 271
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
+ T +Y L T+ H G P GHY A + +W +D+ VT +VL +
Sbjct: 272 MSKTSQDPQPEYNLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLSE 331
Query: 546 QAYVLFY 552
+ YVLF+
Sbjct: 332 KVYVLFF 338
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 142/353 (40%), Gaps = 59/353 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P +L ++ + G+ + V SG
Sbjct: 85 GLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSKTCHEPGFCMMCTMQNHVIQVFANSG 144
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 145 NVIKP--IGVLN--------ELKRIAKHFRYGS---------QEDAHEFLRYTVDAMQKS 185
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L T L T+ SF+ +FGG L+S
Sbjct: 186 CL-----------PGTKL-----------------DRQTQATSFI----HQVFGGYLRSR 213
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVVT 439
VK KA S T PFL + L+I + + AL F PE L+G T +VT
Sbjct: 214 VKCLNCKAVSDTFDPFLDITLEI--KTAPNVSKALEQFVKPEQLDGENAYKCTKCKKMVT 271
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I + +L L L RF+ S G K+ K V++ L L R + E + Y L
Sbjct: 272 ASKRFTIHRSANVLTLSLKRFANFSGG--KITKDVKYLEHLDL-RPFMSQSQGEPQLYGL 328
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A + H G GHY + N QW +D+SV+ VL+ QAYVLFY
Sbjct: 329 YAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLFY 381
>gi|340377167|ref|XP_003387101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Amphimedon queenslandica]
Length = 636
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 172/381 (45%), Gaps = 67/381 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL----------QELRTRDIPKAGYPTLT-AFVG 251
GL NSGN C++N+ LQ L + + RT KA +L A+
Sbjct: 293 GLYNSGNTCYMNSVLQCLSHTRQMTEFFLSGDAKAEAAEATRT----KARRSSLVNAYTE 348
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
F+ P + +P+ + + + P V S Q+DAQEFL
Sbjct: 349 FLEQMWKPKDD-------------KAVTPNHLRSAMSSLIPMVRTS-----EQQDAQEFL 390
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
F++ +H+E K + S +++ ++ +E +S+ R+ S+ S LS
Sbjct: 391 QFLLCCLHEETNKPKKRLESSESSSSTNLTPSELA---------RSSWKRSLSYDNSYLS 441
Query: 372 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVH-------TIEDALRLFSAPEN 423
D+F GQ++S + + S + + F L L + S++ TI D +L+SA E
Sbjct: 442 DLFMGQVRSTLTCTTCRNTSLSFESFWSLSLPLPSKSKSHSSSLFITISDCFQLYSAEER 501
Query: 424 LEGYRTSSTGNAGVVTAKKS-------VKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
L+ + N V T KS + IQ KILILHL RF+ ++ TKL +V+
Sbjct: 502 LD------SDNQPVCTKCKSSQPSTKKLDIQIFPKILILHLKRFTVRNRYCTKLPSNVKV 555
Query: 477 PLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
P + + + S + KYEL + H G S GHY A+ ++ + +W F+D VT+
Sbjct: 556 PTTVTVEEIAVDKESVKSFKYELYGIINHSG-TISFGHYKAECKH-SGKWYTFNDRVVTS 613
Query: 537 IGTSKVLHDQA--YVLFYKQV 555
+ + + A YVLFY+++
Sbjct: 614 SSEAMITNPSASPYVLFYEKI 634
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 167/402 (41%), Gaps = 87/402 (21%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 253
KS K+ GL N GN CF+N LQ+ + S F + L ++ P L
Sbjct: 182 KSTKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQM----------PCLEGIAFDE 231
Query: 254 SDFDTPSG-------GSSKKKNIS-----------VLDI------GRPFSP-SMFEAVLK 288
+ + P+ G +K+ ++S +L + G+ SP +F A+ K
Sbjct: 232 ASLEPPTHRGRIVTPGRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWK 291
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
V G +Q+DA EFL++++D++H ELL+L L L E
Sbjct: 292 -----VVPRFRGY-QQQDAHEFLTYMLDRLHTELLQL-------------LPRLGHEPP- 331
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---- 403
G + K ++ ++ +FGG L SVV + S T +PF L LDI
Sbjct: 332 ---GLRGKQSI----------VTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRL 378
Query: 404 -----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHL 457
E V ++ +L F E L N G + K I L +L LH+
Sbjct: 379 QRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHI 438
Query: 458 MRFSYGSQGSTKLHKSVRFPLQ-------LVLGRDLLVTPSAEGRKYELVATVTHHGRDP 510
RF + + +K+ V FP++ V G + Y+L A + HHG
Sbjct: 439 KRFRWCNSYRSKVDTQVDFPMESLDMSAFTVRGMTGTRLGAQNSHLYDLAAVIVHHGSGA 498
Query: 511 SKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
GHYTA A + + QW HF+D+SV T V + Y+LFY
Sbjct: 499 GTGHYTAFAVH-DGQWFHFNDSSVRPASTESVAKCKPYILFY 539
>gi|427783739|gb|JAA57321.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 387
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 161/384 (41%), Gaps = 57/384 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK ++ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 79 NQKKKTGTI-------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 126
Query: 323 L--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL-------------P 367
K Q + S A S + + G SA Q P
Sbjct: 127 QAEKQQQQQNSQTNAKGNKCSSSGDTAHNAAGGPMASAGATAQCMQNQVGGTAQPPKPEP 186
Query: 368 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-E 425
+ + DIF G L + + S+ + FL L +D+ +I LR FS E L
Sbjct: 187 TWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFSNTETLCS 244
Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL- 482
++ A+K ++++ L IL LHL RF Y Q + TKL V FPL+L L
Sbjct: 245 EHKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRLF 304
Query: 483 -GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
D P R Y+LVA V H G P++GHY + + + WL FDD V I S
Sbjct: 305 NTSDDAYNPD---RMYDLVAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDIVDKIDASA 360
Query: 542 V------------LHDQAYVLFYK 553
+ + Y+LFY+
Sbjct: 361 IEDFYGLTSDTPKTSESGYILFYQ 384
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 150/363 (41%), Gaps = 47/363 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQE-LRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI + +G + G
Sbjct: 751 GLRNLGNTCYMNSILQCLCNTPALAEYFNNNCYLEDINRHN------ILGHKGEVAEEFG 804
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + N Q+D+QE L F+MD +H
Sbjct: 805 VIMK-----ALWAGLYKCISPRDFKITIGKI-----NEQFAGYDQQDSQELLLFLMDGLH 854
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
++L K N L D A ++ + S + +F GQ K
Sbjct: 855 EDLNKADNRKRYKEEENDHLDDQTGAD----------LAWSKHKLLNESIIVALFQGQFK 904
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
S V+ ++ S T + F+ L L + S + +++D LRLFS E L T N V
Sbjct: 905 STVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKL-------TDNNKVF 957
Query: 439 T--------AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
+ K ++I + IL++HL RFSY + KL SV FPL + ++ P
Sbjct: 958 CRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDNLDLAQYVIGP 1017
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYV 549
++Y L H+G GHYTA + Q W FDD V+ I TS V AY+
Sbjct: 1018 KQSLKRYNLYGVSNHYG-GLDGGHYTAYCKNAAKQRWYKFDDHEVSDISTSSVKSSAAYI 1076
Query: 550 LFY 552
LFY
Sbjct: 1077 LFY 1079
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 34/356 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + + DI ++ +G + G
Sbjct: 724 GLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSN------LLGHKGEVAEEFG 777
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G + SP F+ + +G Q D+QE L F+MD +H
Sbjct: 778 CIMK-----ALWTGQYKCISPKDFKITIGKIN----EQFAGYSHQ-DSQELLLFLMDGLH 827
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
++L K N L D SA + + S + +F GQ K
Sbjct: 828 EDLNKADNRKRQKEENNDHLSDSQAAD----------SAWYKHKQLNESIIVSLFQGQFK 877
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
S V+ K S T + F+ L L + S + +++D ++ F+ E L + R +
Sbjct: 878 STVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLKDCIKAFAKEEKLTDSNRFDCSNCKTQ 937
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
A K ++I L IL++HL RFS+ + KL V FPL+ + ++ P + +KY
Sbjct: 938 RVATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQAYVDFPLESLDLSPYVIGPKS-SKKY 996
Query: 498 ELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L H+G GHYTA + +W FDD V+ I S V AY+LFY
Sbjct: 997 NLFGVSNHYG-GLDGGHYTAYCKNALKQRWFKFDDHDVSDISVSSVKTSAAYMLFY 1051
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 151/362 (41%), Gaps = 40/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ +Q+L + +P A Y ++ ++ + G
Sbjct: 810 GLKNLGNTCFMNSIIQSLANSTPL--------------ATYFIEGSYKYHINRENKLGRG 855
Query: 263 SSKKKNISVLDIG------RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ +V+ R SP F+ + F P Q+D+QEFL F++D
Sbjct: 856 GKVAEEFAVVINAIWSGHYRSISPRDFKLTVSKFVPQFAGY-----EQQDSQEFLLFLLD 910
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+H++L +++ NT L +D+ + N + S + ++F G
Sbjct: 911 GLHEDLNRVKHRKYIEEKDNTHLT----DDQAAQLAWNNHKRLNE------SIMVELFQG 960
Query: 377 QLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
Q KS ++ K S T F+ L L + S ++ D ++ F+ E + G
Sbjct: 961 QFKSTLQCLFCQKKSVTYDAFMYLSLPLLSNNRCSLYDCVKNFTKLEKVGGADKWFCPKC 1020
Query: 436 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
V A K ++I L IL++HL RFSY KL V FP+ + ++ P
Sbjct: 1021 KVHREANKRIEIWKLPHILLIHLKRFSYEGVWRHKLQTDVDFPINNLDMSSHVIGPKKRS 1080
Query: 495 RKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H+G GHYTA + +W FDD V + T V AY+LFY
Sbjct: 1081 -SYNLYAVSNHYG-TMDGGHYTAFCKNAIRQKWYKFDDTEVYEMPTRNVKSSAAYILFYT 1138
Query: 554 QV 555
+
Sbjct: 1139 SI 1140
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 144/356 (40%), Gaps = 65/356 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++NATLQ L P + L+ G T
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYM---------------LSQQHGTTCRRQTSCML 125
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ + +++ + +L F R +QEDA E+L FI+D M
Sbjct: 126 CTLQAHLTRVLCHPGRVLRPLPLLLAAF---------HRHKQEDAHEYLMFILDAMQQ-- 174
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L E+ + P++ + + + +FGG +S +
Sbjct: 175 -----------------ACLPEDKLSDPECPQDSTLIQQ-----------LFGGYWRSQI 206
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 438
+ S+T++P+L + LDI A H++ AL PE LEG Y S V
Sbjct: 207 QCLHCQGISSTLEPYLDISLDI--GAAHSVSQALEQLVKPELLEGENAYHCSKCLEK--V 262
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K + + T K+LIL L RFS K+ K VR+P +L + + L A Y
Sbjct: 263 PASKVLTLHTSPKVLILVLRRFS--DLTGNKMTKEVRYPERLDM-QHCLSEQRAGLLVYV 319
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H GR GHY + N QW DDA V+A + LH AY+LFY Q
Sbjct: 320 LYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALHQPAYILFYMQ 375
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 161/377 (42%), Gaps = 61/377 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+NA LQ+L + F +EL P ++ G +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVSLRSGKTAGRRMYHTR 209
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFI 314
S + ++S+++ R S+++ F+PD + S G +Q+DA EF+ ++
Sbjct: 210 SQGESSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-QQQDAHEFMRYL 268
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+D +H EL N N A + + +D K + T S + S IF
Sbjct: 269 LDHLHRELQ---------NSRNGASHTASPQDGVRLTAADGKCCINGTASVVTS----IF 315
Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAP 421
GG L++ V S PFL L LDI S+ T+ D LR F+
Sbjct: 316 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDL 375
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
E L+ T +KS K +Q L K+L LHL RF + + K+ V FPL
Sbjct: 376 EELDD--TELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPL 433
Query: 479 QLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
+ + R L+ P E Y+LVA V D + G + D+W HF+D++VT
Sbjct: 434 KGLDMRGYLLEPENSLPESCVYDLVA-VASPSMDLAYGSH-------EDRWYHFNDSTVT 485
Query: 536 AIGTSKVLHDQAYVLFY 552
V +AY+LFY
Sbjct: 486 LTSEDAVRKAKAYILFY 502
>gi|332253964|ref|XP_003276102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Nomascus
leucogenys]
Length = 565
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 162/382 (42%), Gaps = 65/382 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF--DTPS 260
GL N GN CFLNA LQ L S P RD DF + P
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPL---------RDF------------CLRRDFWQEVPG 251
Query: 261 GGSSKKKNISVLDI---------GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
GG +++ + D+ +P+ F AV + + P S SG Q+DAQEFL
Sbjct: 252 GGRAQELTEAFADVTGALWHPDSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFL 306
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTR 361
+M+++H E+ + +G AN + S L EE E+ N K + R
Sbjct: 307 KLLMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPEFSDDDRANLMWKRYLER 365
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALR 416
S D+F GQLKS +K Q S T + F L L I ++ ++ D
Sbjct: 366 ED----SKTVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFN 421
Query: 417 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SV 474
LF E LE T + K + +Q +IL+LHL RFS S+GS K V
Sbjct: 422 LFPKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGV 480
Query: 475 RFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 533
PLQ L LG + A Y+L A H G GHYTA R W ++D+
Sbjct: 481 DLPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SAHYGHYTALCR-CQTGWHVYNDSR 536
Query: 534 VTAIGTSKVLHDQAYVLFYKQV 555
V+ + ++V + YV FY+ +
Sbjct: 537 VSPVSENQVASSEGYVPFYQPM 558
>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 177/418 (42%), Gaps = 72/418 (17%)
Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
+SKF C NA+A I GS++ P +NE GL+N GN C+
Sbjct: 7 VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49
Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
N+ LQAL C PF + + L R P+ LT D +++K+ + V+
Sbjct: 50 CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101
Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
P F L+ N + Q+DA EFL+++++ + D LL+ + +
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQDKT 149
Query: 333 NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKA-QGNKAS 390
NG A SL ++ P PS + +IF G L + + S
Sbjct: 150 NG-RLANGSLDSQNHNSNAPP-------------PSTWVHEIFQGTLTNETRCLTCETIS 195
Query: 391 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTL 449
+ + FL L +D+ E +I LR FS E L Y+ A K ++++ L
Sbjct: 196 SKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKL 253
Query: 450 SKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHG 507
IL LHL RF Y Q TKL V FPL+L L + E R Y+LVA V H G
Sbjct: 254 PMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLYDLVAVVVHCG 312
Query: 508 RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
P++GHY A + +D WL FDD V I + + Y+LFY+
Sbjct: 313 SGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQ 369
>gi|397481302|ref|XP_003811887.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pan paniscus]
Length = 594
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 242 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 300
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 301 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 342
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 343 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 397
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 398 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 457
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 458 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 516
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 517 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 572
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 573 QVASSEGYVLFYQ 585
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 164/405 (40%), Gaps = 94/405 (23%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLS-----------------FIMDQMHDE-LLKLQGESTSINGANTALVSLAE 344
+Q+DA EF + F Q LL LQ INGA+T + +
Sbjct: 257 QQQDAHEFNALPFGPPTLGNFRAVSTVFPAQQFCRRILLCLQVNKCCINGASTVVTA--- 313
Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI 403
IFGG L++ V S PFL L LDI
Sbjct: 314 ----------------------------IFGGILQNEVNCLICGTESRKFDPFLDLSLDI 345
Query: 404 YSE------------AVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLS 450
S+ V ++ D LR F+ E L E + K IQ L
Sbjct: 346 PSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLP 405
Query: 451 KILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHG 507
K+L LHL RF + + K+ V FPL+ + + L+ P G + Y+L A V HHG
Sbjct: 406 KVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKWYLLEPENSGPESCLYDLAAVVVHHG 465
Query: 508 RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
GHYTA A + +W HF+D++VT V+ +AY+LFY
Sbjct: 466 SGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVVKAKAYILFY 509
>gi|410920842|ref|XP_003973892.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Takifugu
rubripes]
Length = 369
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 159/374 (42%), Gaps = 66/374 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 320
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 321 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
E K + ++ + TA + AE D NK+ T + DIF G L
Sbjct: 137 QEEKKQEKQNGRLKNNGTAGATEAETD--------NKTEST--------WVHDIFQGTLT 180
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 293
Query: 495 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 352
Query: 545 -----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 353 ISKNSESGYILFYQ 366
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 32/267 (11%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 8 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 57
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 58 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 113
Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 114 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 173
Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 525
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 174 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 232
Query: 526 WLHFDDASVTAIGTSKVLHDQAYVLFY 552
W HF+D++VT V+ +AY+LFY
Sbjct: 233 WFHFNDSTVTLTDEETVVKAKAYILFY 259
>gi|119573030|gb|EAW52645.1| ubiquitin specific peptidase 21, isoform CRA_d [Homo sapiens]
Length = 565
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|109017739|ref|XP_001117768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Macaca mulatta]
gi|410034003|ref|XP_524939.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 9 [Pan
troglodytes]
gi|426332415|ref|XP_004027801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Gorilla
gorilla gorilla]
Length = 565
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFR---------FGNQEDAHEFLQYTVDAMQK 211
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 181/392 (46%), Gaps = 46/392 (11%)
Query: 176 SSISGSKEVPMKAINEPVKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQ--LL 230
+S+S SK V + + K+ P GL+ N GN CF+N LQ L S +P ++ L
Sbjct: 22 TSVSRSKLVST-VMGLIINQAKNKRPHGLVGLRNLGNTCFMNTILQCL-SNTPDLRDYCL 79
Query: 231 QELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNF 290
+ D+ TA + +F + +++ + SPS ++ +
Sbjct: 80 TNVHRLDLGD----NCTANTTLMEEF------AKLIQSLCLSGSNEAISPSDVWKQIQQY 129
Query: 291 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWET 350
P Q+DAQEFL F++D +H++ +N A+ +++
Sbjct: 130 GPKFVGC-----NQQDAQEFLRFLLDGLHND----------VNRASVLPKVSGHDNDHLG 174
Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YS 405
K+K S + D+F GQLKS V ++TV PF L + I S
Sbjct: 175 DDEKSKRMWNLYLEREDSKVVDLFVGQLKSSVTCTFCGFTSTVFDPFWDLSIPIPAQKSS 234
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSY 462
E V T++D LRLF+ + L+G S + +K K IQ +IL+LHL RFS
Sbjct: 235 EEV-TLKDCLRLFTKEDVLDG--DESPMCCRCKSRRKCTKRFSIQRFPQILVLHLKRFSD 291
Query: 463 GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 522
S ++KL V FPL+ + R+ T E Y+L A V++H + GHYTA R+
Sbjct: 292 SSVRTSKLSTYVNFPLKELEMRE-FATTGGERVTYDLYA-VSNHSGNAMGGHYTAYCRHP 349
Query: 523 N-DQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
+ +W ++D+ V+ + T+ + AY+LFY+
Sbjct: 350 SLGEWYSYNDSRVSPVSTANIRSSNAYLLFYE 381
>gi|395729514|ref|XP_002809941.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pongo abelii]
Length = 594
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 242 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 300
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 301 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 342
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 343 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 397
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 398 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 457
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 458 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 516
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 517 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 572
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 573 QVASSEGYVLFYQ 585
>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 177/418 (42%), Gaps = 72/418 (17%)
Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
+SKF C NA+A I GS++ P +NE GL+N GN C+
Sbjct: 7 VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49
Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
N+ LQAL C PF + + L R P+ LT D +++K+ + V+
Sbjct: 50 CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101
Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
P F L+ N + Q+DA EFL+++++ + D LL+ + +
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQDKT 149
Query: 333 NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKA-QGNKAS 390
NG A SL ++ P PS + +IF G L + + S
Sbjct: 150 NG-RLANGSLDSQNNNSNAPP-------------PSTWVHEIFQGTLTNETRCLTCETIS 195
Query: 391 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTL 449
+ + FL L +D+ E +I LR FS E L Y+ A K ++++ L
Sbjct: 196 SKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKL 253
Query: 450 SKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHG 507
IL LHL RF Y Q TKL V FPL+L L + E R Y+LVA V H G
Sbjct: 254 PMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLYDLVAVVVHCG 312
Query: 508 RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
P++GHY A + +D WL FDD V I + + Y+LFY+
Sbjct: 313 SGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQ 369
>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 161/385 (41%), Gaps = 54/385 (14%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF + L E + I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKSIGDAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T + SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+F+++++ D L K S ++ +A GPK+ A ++ L
Sbjct: 113 AHEFLNFLLNELVDILEKEAQAVKSDPETSSPPEKIAN-------GPKHAQANGVSKEPL 165
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + F G L + + Q +A + F L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 339 QTFFGSAQEYSSNTDHGYILFYESI 363
>gi|432853252|ref|XP_004067615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Oryzias
latipes]
Length = 369
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 60/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG L T P+ ++ + P+ + DIF G L +
Sbjct: 136 LQEEKKQEKQNG------RLKNNGTPVTSEPEMENKIE------PTWVHDIFQGTLTNET 183
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEA 241
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVNLD 296
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 297 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 355
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 356 NSESGYILFYQ 366
>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
Length = 369
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 163/388 (42%), Gaps = 60/388 (15%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF + L + + + I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKSIGDAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T + SS+KK V+ +P F LK N I +D
Sbjct: 70 TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNEIFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---EWETVGPKNKSAVTRTQ 363
A EFL+F+++++ D L K A+ S AE E + GPK A +
Sbjct: 113 AHEFLNFLLNELVDILEK----------EAHAIKSDAESSSPPEKISNGPKTGQANGAQK 162
Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
L + + F G L + + + +A + FL L LDI E +I L+ FS+ E
Sbjct: 163 EPLVTWVHKNFQGLLTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTE 220
Query: 423 NLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
L + + A+K +KI+ IL++HL RF Y Q KL V FPL+
Sbjct: 221 TLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLE 280
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L L T +Y L A V H G P+ GHY + + N WL FDD +V I
Sbjct: 281 LKLSN----TMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDE 335
Query: 540 SKVL------------HDQAYVLFYKQV 555
S V D Y+LFY+ +
Sbjct: 336 SVVQTFFGSAQEYSSNTDHGYILFYESI 363
>gi|324515005|gb|ADY46059.1| Ubiquitin carboxyl-terminal hydrolase 46 [Ascaris suum]
Length = 392
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 171/381 (44%), Gaps = 63/381 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
GL+N GN C+ N+ +QAL C PF +Q Q+L+ K T A D
Sbjct: 26 GLVNFGNTCYCNSVIQALYFCQPFREKILQYKQQLKKSGTQKENLLTCLA--------DL 77
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+++K+ + + +P F LK N I Q+DA EFL+++++ +
Sbjct: 78 FHNIATQKRRVGTI------APKRFITKLKK-----ENEIFDNYMQQDAHEFLNYLLNTI 126
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-------LS 371
E L + S + AN +A++ + P N + +R+Q PS +
Sbjct: 127 -SETLSEEKRSEKASKAN----GMAKKGS-SVINPSN-THDSRSQC-QPSGSKGESTWIH 178
Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
+IF G L + + S+ + FL L +D+ A +I LR+FS E L+ +
Sbjct: 179 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSNMETLQADQKY 236
Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLL 487
N A+K ++++ L ++L LHL RF Y Q S TKL V FPL+L R
Sbjct: 237 YCENCCSKQEAQKRMRVKKLPQLLALHLKRFKYVEQLSRYTKLSYRVLFPLEL---RLFN 293
Query: 488 VTPSA--EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI-------- 537
V+ A R Y+L A V H G P++GHY + + WL FDD V I
Sbjct: 294 VSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITVVKS-HAFWLLFDDDIVDKIDPVTIEDF 352
Query: 538 -GTSKV----LHDQAYVLFYK 553
G S+ + AY+LFY+
Sbjct: 353 FGLSECGVQKNSESAYILFYQ 373
>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 842
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 141/356 (39%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 3 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 54
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 55 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 103
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG+L+S
Sbjct: 104 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 133
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI ++ AL+ F+A E L+G Y+
Sbjct: 134 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 190
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK I +L +HL RFS K+ K V F L L + + K
Sbjct: 191 -VVAKKKFTIDKAPYVLTIHLKRFS-PFNPREKIDKKVDFQPMLDL-KPFISDSKVSNLK 247
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 248 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 303
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 38/256 (14%)
Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
P ED+ EFL ++D MH+ L+ + P + A T
Sbjct: 39 PSCEDSHEFLRCLLDAMHEACLR----------------------RFRPAKPPPELAAT- 75
Query: 362 TQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
+ + IFGG+LKS ++ G + S T PFL L L+I A ++E AL F+A
Sbjct: 76 ------TFVYRIFGGRLKSQIECDGVDYVSRTFDPFLDLSLEINRAA--SLERALAAFTA 127
Query: 421 PENLEGYRTSSTGNAG----VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
E L TS G V A K + I+ +L +HL RF YG G+ K++K V F
Sbjct: 128 AEVLTAPTTSHGRRCGSCASWVRATKRISIEDAPNVLTVHLKRFEYGGFGA-KINKHVAF 186
Query: 477 PLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
+L L R + Y+L + HHG + GHY + N W DD V A
Sbjct: 187 GTELNL-RPYMSATKGPALMYDLYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVAA 245
Query: 537 IGTSKVLHDQAYVLFY 552
+G VL +AY+LFY
Sbjct: 246 VGERTVLDQRAYILFY 261
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 172/430 (40%), Gaps = 70/430 (16%)
Query: 130 LKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGSKEV--PMK 187
LKA I +S ++ H + H + N +G ++ S+ K V P
Sbjct: 33 LKAKYIPLNSIKKSGSDH-------ELHFEANMNTNGNSVTESSSGESLPSPKTVLYPED 85
Query: 188 AINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTL 246
I K + + GL+N GN CFLN+TLQ L +P V + + G+ +
Sbjct: 86 KIKLQWKKIYKI-GSGLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQTCKQPGFCMM 144
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
+ SG + K +A+L+ + GR QED
Sbjct: 145 CELQRHIKRCYENSGSNIKP-----------------QAILQKLKMIAKHMHWGR--QED 185
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL +++D M +L NG + L ++E
Sbjct: 186 AHEFLRYVVDSMQKSIL---------NG-HAKLDKFSKE--------------------- 214
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ ++ IFGG L+S V+ + + S T PFL + LDI + V ++E A + PE L+
Sbjct: 215 TTVVNQIFGGYLRSQVQCLRCKEKSNTYDPFLDISLDI--KTVPSLEKAFEKYVLPEKLD 272
Query: 426 ---GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
Y + V A K + +L + L RF Y K+ + V FP +L L
Sbjct: 273 CDNAYMCNRCKQK--VPALKRFSVHKPPNVLTVSLKRFDYSKMVQGKIGRHVHFPEKLNL 330
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
R + E + L A + H G + GHY + + W +D++V + ++V
Sbjct: 331 -RPYMSNRGGEPILFHLNAVLVHSGYTANSGHYYCYVKASSGSWYCMNDSNVQQVSVNRV 389
Query: 543 LHDQAYVLFY 552
L +AYVLFY
Sbjct: 390 LGAEAYVLFY 399
>gi|357619275|gb|EHJ71919.1| hypothetical protein KGM_06054 [Danaus plexippus]
Length = 880
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 154/358 (43%), Gaps = 61/358 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF--DTPS 260
G+ N GN C+LN+TLQAL F L T K G + S
Sbjct: 125 GMQNVGNTCYLNSTLQALFHVPAFANWLVSDCTH-AEKCNQEEACVICGMRATLMATQKS 183
Query: 261 GGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
GG++ K P+ S + K+ TP RQEDA EFL ++++ M
Sbjct: 184 GGAAIK----------PWQVYSKLRLICKHLTPG---------RQEDAHEFLRYLVEAME 224
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L + L++ + D++ S + L+ I GG L+
Sbjct: 225 KCYL-------------SRLINADKLDQY---------------SKETTPLNQILGGYLR 256
Query: 380 SVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE--GYRTSSTGNAG 436
S V+ + S T Q F L LDI + T+++AL F + E LE GY+ +
Sbjct: 257 STVRCLACHHLSTTYQHFQDLLLDIRKHS--TLDEALDSFFSRERLEDLGYKCEACNKK- 313
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V+A K I+ +L + L RFS KL K V+F ++ L + + +
Sbjct: 314 -VSATKQFFIERAPMVLCIALKRFSLAG---GKLSKHVQFRKKINLNKYIYNKNNPHQLS 369
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y+LV+ VTH G + GHYTA + N + FDD+ V I S VL AY++F+++
Sbjct: 370 YKLVSLVTHLGPSQNSGHYTAIGQAPNSNYYQFDDSCVRPIPLSAVLGTNAYIMFFEK 427
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 152/361 (42%), Gaps = 65/361 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-----RTRDIPKAG-YPTLTAFVGFVS-D 255
G N+GN CFLNATLQAL+ L + + D+ +A + L V+
Sbjct: 181 GFYNTGNTCFLNATLQALVHTPALAIGLMDRDEHSPESCDLARAKKFCALCRMYRLVNMC 240
Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
FD S GS PS L F P + RQEDA EFL ++
Sbjct: 241 FDKASYGSHA------------IEPSPINRALSKFAPTMRGG-----RQEDAHEFLRLLV 283
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
+ M NGA A++ + E+ + + +FG
Sbjct: 284 EAMQ-------------NGALQGRAEKAKQKQKES-----------------TFVHRMFG 313
Query: 376 GQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
G+L+S VV N S T FL L LDI +++ AL+ + + L G
Sbjct: 314 GKLRSRVVCEHCNTPSDTFDNFLDLSLDI--SQANSVSSALKAYHKFDRLRGANQYKCDK 371
Query: 435 AGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ AKKS+ + + IL LHL RF++ + K++K V F L L +
Sbjct: 372 CKCLRDAKKSMSVFSAPPILTLHLKRFNFRGR---KINKRVNFEDSLDLKPAMSNESDIT 428
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL--HDQAYVLF 551
G Y+L A V H G+ GHY A + N +W DD++V +I S+ + ++ AY+LF
Sbjct: 429 G--YKLYAVVCHRGQSNKSGHYYAHVKASNGKWYVADDSTVESISDSRTVLANEHAYILF 486
Query: 552 Y 552
Y
Sbjct: 487 Y 487
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 148/379 (39%), Gaps = 69/379 (18%)
Query: 184 VPMKAINEPVKSV-----KDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRD 237
PM A P K + ++ GL N GN C++NA LQ L P +L + +
Sbjct: 57 APMSAGLAPTKKLVSWKRPSVVGAGLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQT 116
Query: 238 IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
K + L A ++ G D+ RP P + A +
Sbjct: 117 CGKQTFCMLCALQAHMTRALCHPG-----------DVIRPL-PRLLAAFHTH-------- 156
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 357
+QEDA EFL F + M L P++K
Sbjct: 157 -----QQEDAHEFLMFTLGAMQQACL-----------------------------PEDKP 182
Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
+ QS + + IFGG +S + S+T+ P+L + LDI EA ++ AL
Sbjct: 183 --SDPQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDI--EAAQSVSQALE 238
Query: 417 LFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
PE L+G G V A K + + T SK+LIL L RFS + K+ K V
Sbjct: 239 QLVKPEKLDGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFT--GNKMAKDVH 296
Query: 476 FPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
+P L + + L A Y L A + H G GHY + N QW DD+ VT
Sbjct: 297 YPEHLDM-QPYLCEQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVT 355
Query: 536 AIGTSKVLHDQAYVLFYKQ 554
A + L AYVLFY Q
Sbjct: 356 ARDATCALSQHAYVLFYIQ 374
>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
Full=Deubiquitinating enzyme 12A; AltName:
Full=Ubiquitin thioesterase 12A; AltName:
Full=Ubiquitin-specific-processing protease 12A
gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
Length = 371
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 177/419 (42%), Gaps = 75/419 (17%)
Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
+SKF C NA+A I GS++ P +NE GL+N GN C+
Sbjct: 7 VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49
Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
N+ LQAL C PF + + L R P+ LT D +++K+ + V+
Sbjct: 50 CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101
Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
P F L+ N + Q+DA EFL+++++ + D LL+ + +
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQDKQ 149
Query: 333 NG--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
NG AN L S N S T + + +IF G L + +
Sbjct: 150 NGKLANGTLDS-----------QNNNSTPPST-----TWVHEIFQGTLTNETRCLTCETI 193
Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQT 448
S+ + FL L +D+ E +I LR FS E L Y+ A K ++++
Sbjct: 194 SSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKK 251
Query: 449 LSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHH 506
L IL LHL RF Y Q TKL V FPL+L L + E R Y+LVA V H
Sbjct: 252 LPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLYDLVAVVVHC 310
Query: 507 GRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
G P++GHY A + +D WL FDD V I + + Y+LFY+
Sbjct: 311 GSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYILFYQ 368
>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
Length = 440
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 169/404 (41%), Gaps = 67/404 (16%)
Query: 166 GRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
GR NA+A I G ++ P +NE GL+N GN C+ N+ LQAL C P
Sbjct: 85 GRGANASALEKEI-GPEQFP---VNEHY--------FGLVNFGNTCYCNSVLQALYFCRP 132
Query: 226 FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEA 285
F + + L + P+ LT T +KK + V+ P F
Sbjct: 133 FRE--KVLAYKSQPRKKENLLTCLADLFHSIAT------QKKKVGVI------PPKKFIT 178
Query: 286 VLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE 345
L+ N + Q+DA EFL+++++ + D +L+ + + NG +
Sbjct: 179 RLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-ILQEERKQEKQNGR----LPNGNI 228
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIY 404
D P + P+ + +IF G L + + S+ + FL L +D+
Sbjct: 229 DSENNSSPPD-----------PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV- 276
Query: 405 SEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG 463
E +I LR FS E L Y+ A K +K++ L IL LHL RF Y
Sbjct: 277 -EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYM 335
Query: 464 SQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY 521
Q TKL V FPL+L L + + R Y+LVA V H G P++GHY A +
Sbjct: 336 DQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKS 394
Query: 522 FNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
+D WL FDD V I + + Y+LFY+
Sbjct: 395 -HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 437
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 146/355 (41%), Gaps = 62/355 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L +R G+ + ++ + G
Sbjct: 95 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSRTCHVKGFCMMCTMQAHITQALSHPG 154
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
D+ +P S + N DV QEDA EFL +I+D M
Sbjct: 155 -----------DVLKPMS-------IINEMEDVATHFHFG-SQEDAHEFLQYIVDGM--- 192
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ +NG+N L + T+ + IFGG L+S
Sbjct: 193 ------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRSR 224
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
VK K S T +PFL + L+I +A ++ AL F PE L+G Y+ S +
Sbjct: 225 VKCLNCKGVSDTFEPFLDITLEI--KASPSVNKALEQFVKPEQLDGENAYKCSKCKK--M 280
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
V A K I S +L L L RF+ + G K+ K V++P L + R + + E Y
Sbjct: 281 VPASKRFTIHRSSNVLTLSLKRFANTTGG--KIAKDVKYPEYLDI-RPYMSQQNGEPIIY 337
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 338 VLYAVLVHAGFNCHSGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 392
>gi|302785516|ref|XP_002974529.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
gi|300157424|gb|EFJ24049.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
Length = 364
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 165/386 (42%), Gaps = 65/386 (16%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF QLL R + + +A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T + + S+KK V+ +P F +K + + +D
Sbjct: 70 TCLADLFTQIN------SQKKKTGVI------APKRFVQRVKK-----QHELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA---VTRTQ 363
A EFL+F+++Q+ + AL A+ D P+ KS+ T +
Sbjct: 113 AHEFLNFLLNQLVE-----------------ALEKEAKSDPTAPASPEKKSSDNGATGEE 155
Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
L + + IF G L + + + +A + FL L LDI E ++ LR FS+ E
Sbjct: 156 HPL-TWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDI--EQNSSVTSCLRNFSSTE 212
Query: 423 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
L + + A+K +KI+T +IL LHL RF Y Q KL V FPL+
Sbjct: 213 TLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLE 272
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L L P +E +Y L A V H G P+ GHY + + N WL FDD +V I
Sbjct: 273 LKLCNTAEDAPGSES-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDE 330
Query: 540 SKVL------------HDQAYVLFYK 553
S V D Y+LFY+
Sbjct: 331 SYVQTFFGSTQEYSNNTDHGYILFYE 356
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 148/378 (39%), Gaps = 69/378 (18%)
Query: 185 PMKAINEPVKSV-----KDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI 238
PM A P K + ++ GL N GN C++NA LQ L P +L + +
Sbjct: 58 PMSAGLAPTKKLVSWKRPSVVGAGLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTC 117
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI 298
K + L A ++ G D+ RP P + A +
Sbjct: 118 GKQTFCMLCALQAHMTRALCHPG-----------DVIRPL-PRLLAAFHTH--------- 156
Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA 358
+QEDA EFL F + M L P++K
Sbjct: 157 ----QQEDAHEFLMFTLGAMQQACL-----------------------------PEDKP- 182
Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
+ QS + + IFGG +S + S+T+ P+L + LDI EA ++ AL
Sbjct: 183 -SDPQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDI--EAAQSVSQALEQ 239
Query: 418 FSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
PE L+G G V A K + + T SK+LIL L RFS + K+ K V +
Sbjct: 240 LVKPEKLDGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFT--GNKMAKDVHY 297
Query: 477 PLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
P L + + L A Y L A + H G GHY + N QW DD+ VTA
Sbjct: 298 PEHLDM-QPYLCEQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTA 356
Query: 537 IGTSKVLHDQAYVLFYKQ 554
+ L AYVLFY Q
Sbjct: 357 RDATCALSQHAYVLFYIQ 374
>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
Length = 470
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 61/369 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 140 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 193
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++
Sbjct: 194 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE-- 239
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ LAE + + G K + P+ + +IF G L S
Sbjct: 240 -----------------IILAERTQSKPTGGKCGAGDAAGSPPEPTWVHEIFQGILTSET 282
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 283 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 340
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 341 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 397
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 398 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 456
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 457 ETGYILFYQ 465
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 165/371 (44%), Gaps = 40/371 (10%)
Query: 193 VKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 249
+ K+ P+GL+ N GN CF+N+ LQ L + S L++ R++ + T
Sbjct: 47 INQAKNKSPQGLVGLRNLGNTCFMNSILQCLSNTSE----LRDYCLRNVHRLDVNNRTN- 101
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F + NI + SPS F + ++ P Q+DAQE
Sbjct: 102 AALMEEFAKLTQSLWTSVNIEAI------SPSDFRSEIQRVAPKFVGC-----NQQDAQE 150
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL ++D +H+E +N S E+ + + K+K + S
Sbjct: 151 FLRSLLDGLHNE----------VNRVTVRPRSSVEDFDHYSDEEKSKRMWNLYLAREDSK 200
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSE--AVHTIEDALRLFSAPENLEG 426
+ D+F GQLKS + +T+ PF L + I E T++D LRLF+ + L+G
Sbjct: 201 VVDLFVGQLKSSLTCTVCGFRSTMFDPFWDLSIPIAQERPGEVTLKDCLRLFTKEDVLDG 260
Query: 427 YRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
+ K IQ +IL++HL RFS + S+KL V FPL+ + R+
Sbjct: 261 EEKPTCNKCKARRKCTKRFSIQKFPQILVIHLKRFSDSNSRSSKLSTFVNFPLKELDLRE 320
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND---QWLHFDDASVTAIGTSKV 542
++E Y L A H G + GHYTA R N +W ++D+ V+ I + +V
Sbjct: 321 -FSADNSEHPVYNLYAVSNHTG-NTLGGHYTAYCR--NPALGEWYSYNDSRVSPISSGQV 376
Query: 543 LHDQAYVLFYK 553
AYVLFY+
Sbjct: 377 RTSNAYVLFYE 387
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 150/359 (41%), Gaps = 55/359 (15%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSP---FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
P GL N GN C+LN+ LQ L P F LQ D + P
Sbjct: 23 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCDSSGSSCPFCILEKQIARSLR 82
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
LD+ +PS ++ ++ F + RQEDA EFL +++D
Sbjct: 83 --------------LDLTHD-APSKIQSCIRIFAENFRCG-----RQEDAHEFLRYVIDA 122
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
H+ L+L+ AN +E TV + +IFGG
Sbjct: 123 CHNTCLRLKKLRRKGAEANGG----GDEAGGSTV------------------VKEIFGGA 160
Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 433
L+S VK S V + + LD++ ++++D+++ F PE L+G Y+ S
Sbjct: 161 LQSQVKCLCCGYESNKVDEIMDISLDVFHS--NSLKDSMQKFFQPEVLDGNNKYKCDSCK 218
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+V AKK + I IL++ L RF G G K+ K+V F LVL +
Sbjct: 219 K--LVAAKKQMSILQAPNILVIQLKRFE-GILGG-KIDKAVAFEEVLVLSSFMCKASQDP 274
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+Y+L T+ H G P GHY A + +W DD+ VT +VL ++ Y+LF+
Sbjct: 275 QPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFF 333
>gi|198435016|ref|XP_002126339.1| PREDICTED: similar to ubiquitin specific peptidase 8 [Ciona
intestinalis]
Length = 1094
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 163/363 (44%), Gaps = 50/363 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ + + + + +L + T+D+ +A +G
Sbjct: 760 GLRNLGNSCYMNSVLQCMFNMTQLAEYILTDSYTKDLNRANK------IGH--------- 804
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVL----KNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
G ++ SVL R S +E ++ K+ + +S +G QED+QEFL ++D
Sbjct: 805 GGRVAESFSVL--LRAVWSSKYEYIVPSDFKSIIGTINSSFAGY-TQEDSQEFLMLLLDG 861
Query: 318 MHDELLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+H++L K N AL A + W+ +N+S + ++ G
Sbjct: 862 LHEDLNKAPQSEYKEEPDNDALDDEEAAQMAWKYHKKRNESIIV-----------ELLKG 910
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
Q K+ VK KAS PF+ L L + +++ +I D L+ F E + G N
Sbjct: 911 QFKATVKCLHCGKASRKFDPFMYLSLPLPNKSA-SIYDILKSFQRVEQMTGSDRWHCPNC 969
Query: 436 GVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ A +S++I L +LI+H RF + + K+H ++ +P+ L +TP G
Sbjct: 970 KTLRDAVRSIEIWKLPPVLIIHFKRFVHTGRWRDKIHTNISYPMT-----QLDLTPFISG 1024
Query: 495 R----KYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
+ KY L A H G GHYTA + ++ W FDD V + TS A +
Sbjct: 1025 KQRRPKYNLFAVSHHQGAGLDSGHYTASCKSVLDNNWYKFDDTEV--MRTSAPQGPTASI 1082
Query: 550 LFY 552
LFY
Sbjct: 1083 LFY 1085
>gi|390476931|ref|XP_002760234.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Callithrix jacchus]
Length = 565
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 163/372 (43%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I + A +L EE + N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPAPSPPCRGGALLEEPDLSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 152/368 (41%), Gaps = 69/368 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N C+ NATLQ L+ P +++ LT G
Sbjct: 148 GLHNPSMACYANATLQILLHTPPVLRI---------------ALTHDEGNCLQI------ 186
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 316
KKKN +L + + + K + P + +S + RQED EF F+ D
Sbjct: 187 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRHLSQIKKGFSKNRQEDTHEFFRFVTD 244
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+ NTAL L + D E + K+ S V R ++GG
Sbjct: 245 ALQ----------------NTALAKLPK-DTPEKI--KHTSWVYR-----------VWGG 274
Query: 377 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG
Sbjct: 275 RVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCEKC 334
Query: 436 GV-VTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQLVLGRDLLV 488
A KS K+ +L LHL RFS G + K ++ ++F L + +V
Sbjct: 335 KCKANATKSFKVDQAPPVLTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQNLDMA-PYMV 393
Query: 489 TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-A 547
P + G KY L H G + GHYT+ R + QW H DD V+ + +VL+D+ A
Sbjct: 394 DPKSPGSKYRLFGVTCHRGTELRFGHYTSYVRSPSGQWFHADDDDVSPVQLEQVLNDKTA 453
Query: 548 YVLFYKQV 555
Y+L Y +V
Sbjct: 454 YLLSYIRV 461
>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
Length = 870
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 138/353 (39%), Gaps = 55/353 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL+N GN C+LN+ LQ L P L E +D K G+ L + +G
Sbjct: 106 GLVNLGNTCYLNSVLQCLCYTPPLANYALAEQHKKDCRKIGFCVLCELQSLMVRCLKSNG 165
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
S K P LKN + RQEDA EFL +++D +
Sbjct: 166 SSVK--------------PWPIVNKLKNIASHIQFG-----RQEDAHEFLRYLVDGIQSS 206
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L PKN ++ + + IFGG L+S+
Sbjct: 207 CL--------------------------AAYPKNLDQYSKDTTMI----YRIFGGYLRSL 236
Query: 382 VK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
V+ AQ S P L L LDI ++T+ LR F PE L G + V V
Sbjct: 237 VQCAQCKYKSIKYDPMLDLSLDIAD--LNTLSAMLRKFIEPEILSGRDMYTCSKCKVKVK 294
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I +L + + RF+ S K + ++F L L R + + + Y L
Sbjct: 295 AMKKFTIHRAPVVLTIPIKRFNKFSLFGGKNSRKIKFTETLDL-RPYMTSKTGSPLLYNL 353
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+ H G + GHY + N+QW +D+ VT + VL +AY+LFY
Sbjct: 354 YGVLVHSGGSCNSGHYYCYVKSSNNQWYCMNDSHVTKSNINAVLLQEAYILFY 406
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 163/395 (41%), Gaps = 73/395 (18%)
Query: 203 GLINSGNLCFLNATLQALMSC---SPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD- 255
GL N GN CF+N+ LQ+L + S + + L + KA + T FV +
Sbjct: 233 GLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKHKQKAYHSRSMKETMDDVFVVEE 292
Query: 256 -----FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
+ GG K IS P V+ P RQ DA EF
Sbjct: 293 LRKVLLNLSQGGDGSKSAIS---------PECLFLVIWKVVPQFRGH-----RQHDAHEF 338
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-LPSA 369
L +++D++H EL ++ + V L E P N S ++ Q+ S
Sbjct: 339 LRYMLDRLHTELQQV-----------SFPVELGGPKSGEHKNPYNVSGLSHLQAKGRNSI 387
Query: 370 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSEA----------------- 407
++++FGG L+S V+ S PFL L LDI YS+
Sbjct: 388 VTNVFGGVLQSEVRCLICGMESKKHDPFLDLSLDIPEKYYSKEHGADGTNGADGGGGAAP 447
Query: 408 VHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
V I D L F+ E L E Y +S T K I+ L +L LH+ RF + +
Sbjct: 448 VCHISDCLSSFTEVEELAETELYYCNSCKCKQKST--KRFWIRRLPNVLCLHIKRFRWNN 505
Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-------YELVATVTHHGRDPSKGHYTA 517
TK+ + FP+ + ++ E R+ Y+L A + HHG S GHYT+
Sbjct: 506 FYRTKIDLRIAFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTS 565
Query: 518 DARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A N W+HF+D +V + ++ V + Y+LFY
Sbjct: 566 FA-INNGVWMHFNDHTVKEVSSTAVAECKPYILFY 599
>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
Length = 355
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 61/369 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE-- 124
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ LAE + + G K + P+ + +IF G L S
Sbjct: 125 -----------------IILAERTQSKPTGGKCGAGDAAGSPPEPTWVHEIFQGILTSET 167
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 168 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 225
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 226 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 282
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 283 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 341
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 342 ETGYILFYQ 350
>gi|195113703|ref|XP_002001407.1| GI21992 [Drosophila mojavensis]
gi|193918001|gb|EDW16868.1| GI21992 [Drosophila mojavensis]
Length = 361
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 58/370 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A + + S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ KKK S+ +P F L+ + N + Q+DA EFL+F+++ +++
Sbjct: 78 ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINEI 125
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+L + + ++A T P ++ T+ P+ + +IF G L S
Sbjct: 126 ILAERNSGKTPAAGSSA-----------TTTPIGQTNGANTE---PTWVHEIFQGILTSE 171
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVT 439
+ S+ + F L +D+ +I LR FS E L N
Sbjct: 172 TRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCCSYQE 229
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGR 495
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 230 AQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD---R 286
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV---------LH-- 544
Y+L A V H G P++GHY + + + WL FDD V I S + +H
Sbjct: 287 LYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKS 345
Query: 545 -DQAYVLFYK 553
+ Y+LFY+
Sbjct: 346 SETGYILFYQ 355
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 157/363 (43%), Gaps = 63/363 (17%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
P GL+N GN CF N LQ L P + LL++ R+ + F+ +F+T
Sbjct: 177 PCGLLNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHRECCHNDW-------CFLCEFET- 228
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+K +S + FSP + L N + + G RQEDA EF+ F +D M
Sbjct: 229 ---HVEKVRLS----SQAFSPMNILSRLPNISGTL-----GYGRQEDAHEFMRFSIDAMQ 276
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
V L E + V P+N+ + + IFGG L+
Sbjct: 277 S-------------------VCLDEFGGEKVVPPRNQET---------TLIQHIFGGHLQ 308
Query: 380 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
S V+ + K S + + L ++I+ +A ++E+ L F+A E L G Y+ G
Sbjct: 309 SEVICTECEKNSNQYENMMDLTVEIHGDAA-SLEECLDQFTAKEWLHGDNMYKCD--GCK 365
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
G V A K + ++ IL + L RF G G KL+K V FP L L ++ +G
Sbjct: 366 GYVKAWKRLTVKQAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSP--YMSEVGDGS 421
Query: 496 K-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y+L A V H + GHY + F W DD V+++ +VL AY+L Y
Sbjct: 422 DIYKLYAVVVHIDMLNASFFGHYICYIKDFCGNWYRIDDWKVSSVELEEVLSQGAYMLLY 481
Query: 553 KQV 555
+V
Sbjct: 482 SRV 484
>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
terrestris]
Length = 354
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + +S G A + P P+ + +IF G L S
Sbjct: 127 LAERSQSKPTGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 281
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 282 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 340
Query: 545 DQAYVLFYKQV 555
+ Y+LFY+ +
Sbjct: 341 ETGYILFYQSI 351
>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
guttata]
Length = 358
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 160/373 (42%), Gaps = 68/373 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRD--KVLAYKSQPRKKENLLTCLA------DLFHSI 80
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N ++ S E+ P + P+ + +IF G L +
Sbjct: 129 LQEERKQEKQNGRLPNGSVDS-------ESSSPPD-----------PTWVHEIFQGTLTN 170
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 171 ETRCLTCETVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 228
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 229 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATN 283
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 284 PDRMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDI 342
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 343 SKNSESGYILFYQ 355
>gi|149408831|ref|XP_001507996.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Ornithorhynchus anatinus]
Length = 1116
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQEDINRSN------LLGHKGEVAEEFG 829
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + SG Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFSGY-SQQDSQELLLFLMDGLH 879
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDCRAAELAWHKHKQLNESIIV-----------ALFQGQF 928
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ +K S T + F+ L L + S + +++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKRSRTFEAFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNRFYCSHCKT 988
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ + ++
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYEGRWKQKLQTSVDFPLESLDLSQYVIGSKSSLKR 1048
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
Length = 370
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 160/374 (42%), Gaps = 65/374 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 320
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 321 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
E K + ++ + TA+ + +T +NK P+ + +IF G L
Sbjct: 137 QEERKQEKQNGRLKNNGTAIAT-------DTEPEQNKID--------PTWVHEIFQGTLT 181
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 182 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCEMCCSK 239
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 240 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 294
Query: 495 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 295 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 353
Query: 545 -----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 354 ISKNSESGYILFYQ 367
>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
rotundata]
Length = 354
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + +S G A + P P+ + +IF G L S
Sbjct: 127 LAERNQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 281
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 282 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 340
Query: 545 DQAYVLFYKQV 555
+ Y+LFY+ +
Sbjct: 341 ETGYILFYQSI 351
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 142/356 (39%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 152
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 153 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 201
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG+L+S
Sbjct: 202 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 231
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI ++ AL+ F+A E L+G Y+
Sbjct: 232 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 288
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 289 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 345
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 346 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 401
>gi|154418012|ref|XP_001582025.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121916257|gb|EAY21039.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 363
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 153/364 (42%), Gaps = 65/364 (17%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLL----QELRTRDIPK-AGYPTLTAFVGFV 253
L P GL+N G +CF NA+LQ L S FV + +R I + A PT +A F
Sbjct: 58 LPPNGLLNKGLMCFANASLQLLFSSKEFVSFILFMKNNMRFFSIAQLASAPTWSALCKFA 117
Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
+ T +K IS + F P F + T EDA EF F
Sbjct: 118 RSYAT------EKNIISTESMDEFFGP--FTSKRHPLT------------MEDAAEFTMF 157
Query: 314 IMDQMHDELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+++++HDEL +L G+ G W+ G K+ + S ++
Sbjct: 158 LLNKLHDELQELIKLGDIKQDAGG------------WQAKGIKSGRITVSDECVKRSPIT 205
Query: 372 DIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
IFG +++ + G+ S +P+L+L LD+ +IE+ L+ +
Sbjct: 206 HIFGTIVRADTLSNGHSRSVGHEPYLVLPLDLSPTLEESIENFLKFSDVDDG-------- 257
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
T+KK+ + S I+I L RF++ G K +++P +L L +
Sbjct: 258 -------TSKKNSFLSLPSSIVI-ALKRFAFDGTGVIKRDDIIKYPSKLRLLKT------ 303
Query: 492 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
+EL A V H G P+ GHY ++ + W +DD+ V I + QAY+L
Sbjct: 304 ----DFELAAIVIHIGSSPASGHYICISKRTDGHWREYDDSDVYGIRDGTEMEQQAYLLL 359
Query: 552 YKQV 555
Y +V
Sbjct: 360 YNRV 363
>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
Length = 355
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 76
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 125
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 126 ----QEERKQEKQNGRLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 169
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 282
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 283 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 341
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 342 NSESGYILFYQ 352
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 142/356 (39%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 111
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 112 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 160
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG+L+S
Sbjct: 161 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 190
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI ++ AL+ F+A E L+G Y+
Sbjct: 191 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 247
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 248 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 304
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 305 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
mellifera]
gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
florea]
Length = 354
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + +S G A + P P+ + +IF G L S
Sbjct: 127 LAERSQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 281
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 282 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 340
Query: 545 DQAYVLFYKQV 555
+ Y+LFY+ +
Sbjct: 341 ETGYILFYQSI 351
>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
impatiens]
Length = 369
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 160/371 (43%), Gaps = 62/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 40 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 93
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 94 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 141
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + +S G A + P P+ + +IF G L S
Sbjct: 142 LAERSQSKPTGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 181
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ + +I LR FS E L + + A
Sbjct: 182 RCLNCETVSSKDEDFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 239
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 240 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 296
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 297 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 355
Query: 545 DQAYVLFYKQV 555
+ Y+LFY+ +
Sbjct: 356 ETGYILFYQSI 366
>gi|351710726|gb|EHB13645.1| Ubiquitin carboxyl-terminal hydrolase 21 [Heterocephalus glaber]
Length = 565
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 160/372 (43%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE + N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANAPVPSPPRRGGALLEEPDLSDDDRANVMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
LE T + K + +Q +IL L L RFS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILDLDLNRFSTSRGSIKKSSVGVDFPLQRLS 488
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|403294063|ref|XP_003938024.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Saimiri
boliviensis boliviensis]
Length = 596
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 163/372 (43%), Gaps = 49/372 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 244 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 302
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 303 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 344
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I + A +L EE + N K + R S
Sbjct: 345 HLEINRRGRRAPPILASGPAPSPPRRGGALLEEPDLSDDDRANLMWKRYLERED----SK 400
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 401 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 460
Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
E T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 461 ESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 519
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 520 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 575
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 576 VASSEGYVLFYQ 587
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 110 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 169
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + + ++F QEDA EFL + +D M
Sbjct: 170 -----------DVIKPMFVINEMQRIARHFRFG---------NQEDAHEFLQYTVDAM-- 207
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 208 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 238
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 239 RVKCLNCKGVSDTFDPYLDITLEI--KAAPSVNKALEQFVKPEQLDGENSYKCSKCKK-- 294
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 295 MVPASKRFTIHRSSNVLTLSLKRFANSTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 351
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 352 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 407
>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
Length = 371
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 167/385 (43%), Gaps = 50/385 (12%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
K++ D P G N GN C+ N+ LQAL C PF + L E T + + A +
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T D S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+++++++ D L+ E+ + + S + E + + V + +
Sbjct: 113 AHEFLNYLLNEVVD---ILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIV 169
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + +IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 170 -TWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
V P A+ +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 287 SNT--VEPYADV-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIEESAV 342
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 343 QTFFGSSQEYSSNTDHGYILFYESL 367
>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 167/385 (43%), Gaps = 50/385 (12%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
K++ D P G N GN C+ N+ LQAL C PF + L E T + + A +
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T D S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
A EFL+++++++ D L+ E+ + + S + E + + V + +
Sbjct: 113 AHEFLNYLLNEVVD---ILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIV 169
Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
+ + +IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 170 -TWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226
Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
V P A+ +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 287 SNT--VEPYADV-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIEESAV 342
Query: 543 L------------HDQAYVLFYKQV 555
D Y+LFY+ +
Sbjct: 343 QTFFGSSQEYSSNTDHGYILFYESL 367
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 163/359 (45%), Gaps = 36/359 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVG-FVSDFDTPS 260
GL N GN CF+N+ LQ L + P ++ L+ + DI TL+ G + F
Sbjct: 580 GLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYNSDINT----TLSCMKGALIKAF---- 631
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
S K+ D + + ++ ++ F P Q+DAQEFL ++++ +H+
Sbjct: 632 -ASVIKELWRSGDRDCVVNTTALKSQVQRFAPRFMGY-----SQQDAQEFLRYLLEGLHE 685
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
++ ++ + I L E D+ + K A +R S + DIF GQLKS
Sbjct: 686 DVNRVTVKPKPI---------LTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKS 736
Query: 381 VVKAQGN-KASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVV 438
++ S T PF L L I S + ++ L+ F E L+G + GV
Sbjct: 737 TLRCTHCLHDSVTFDPFWDLSLPIPSRTGNLKLQQCLQHFVREEELDGDEKPTCSKCGV- 795
Query: 439 TAKKSVKIQTLSK---ILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
+K +K T+ K +L+LHL RFS + KL V FPL + +P+
Sbjct: 796 -RRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGKLSVVVEFPLSGLDMSPFAASPTHAT- 853
Query: 496 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H G S GHYTA ++ + W ++D+ VT I + ++ +AYVLFY+
Sbjct: 854 -YNLYAVSNHSGTTYS-GHYTAYCKHPYTGDWHEYNDSRVTPIRSRDIVSAEAYVLFYE 910
>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
Length = 355
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 159/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 76
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 125 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 169
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 282
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 283 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 341
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 342 NSESGYILFYQ 352
>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 621
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 152/361 (42%), Gaps = 45/361 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA--FVGFVSDFDTPS 260
GL N GN CF+NA LQ L +PFV+ L+ D+P T+T F F+ D+
Sbjct: 70 GLANLGNTCFINAILQCLTHTAPFVEGLRSA-NHDMPCNSKITVTTNTFSLFLGSNDSVV 128
Query: 261 GGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ +N S E + D +S R +QEDA EF+ +D+
Sbjct: 129 DEELRICIHRNFVFASKKLHLDLSKSEIKITTLALDF-SSFFWRYQQEDAHEFMQCFLDK 187
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ ++ + S +E+D+ ++ +FGG+
Sbjct: 188 LERCMVSEGKDRVS-----------SEDDD---------------------LVNKVFGGR 215
Query: 378 LKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS--STGN 434
L S + S T +P + L L+I E V ++ AL F+ E + T
Sbjct: 216 LISNLCCCNCGHCSETHEPLVDLSLEI--ENVDSLSSALESFTKVERIGDPETKFKCENC 273
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
V +K +K++ + + HL RF S K+ K + FPL+L L L AE
Sbjct: 274 KEEVWVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEV 333
Query: 495 R-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
KYEL A V H G + GHY + R D W DD+ VT++ VL +AY+L YK
Sbjct: 334 ELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYK 393
Query: 554 Q 554
+
Sbjct: 394 R 394
>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 676
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 152/361 (42%), Gaps = 45/361 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA--FVGFVSDFDTPS 260
GL N GN CF+NA LQ L +PFV+ L+ D+P T+T F F+ D+
Sbjct: 125 GLANLGNTCFINAILQCLTHTAPFVEGLRSA-NHDMPCNSKITVTTNTFSLFLGSNDSVV 183
Query: 261 GGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ +N S E + D +S R +QEDA EF+ +D+
Sbjct: 184 DEELRICIHRNFVFASKKLHLDLSKSEIKITTLALDF-SSFFWRYQQEDAHEFMQCFLDK 242
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ ++ + S +E+D+ ++ +FGG+
Sbjct: 243 LERCMVSEGKDRVS-----------SEDDD---------------------LVNKVFGGR 270
Query: 378 LKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS--STGN 434
L S + S T +P + L L+I E V ++ AL F+ E + T
Sbjct: 271 LISNLCCCNCGHCSETHEPLVDLSLEI--ENVDSLSSALESFTKVERIGDPETKFKCENC 328
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
V +K +K++ + + HL RF S K+ K + FPL+L L L AE
Sbjct: 329 KEEVWVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEV 388
Query: 495 R-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
KYEL A V H G + GHY + R D W DD+ VT++ VL +AY+L YK
Sbjct: 389 ELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYK 448
Query: 554 Q 554
+
Sbjct: 449 R 449
>gi|332219294|ref|XP_003258791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Nomascus
leucogenys]
Length = 565
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 163/373 (43%), Gaps = 51/373 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN SL E+ E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANVQFPLTRRKRGSLREQMEASDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 543
Query: 541 KVLHDQAYVLFYK 553
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 143/356 (40%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 111
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 112 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 160
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG+L+S
Sbjct: 161 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 190
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI +A + AL+ F+A E L+G Y+
Sbjct: 191 VKCTQCSHCSNKFDPFLDLSLDI-GKATSLVR-ALQNFTAEELLDGGEKQYQCQRCRKK- 247
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 248 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 304
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 305 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
>gi|302759609|ref|XP_002963227.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
gi|300168495|gb|EFJ35098.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
Length = 364
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 165/386 (42%), Gaps = 65/386 (16%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 246
K++ D P G L N GN C+ N+ LQAL C PF QLL R + + +A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLL 69
Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
T + + S+KK V+ +P F +K + + +D
Sbjct: 70 TCLADLFTQIN------SQKKKTGVI------APKRFVQRVKK-----QHELFRSYMHQD 112
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA---VTRTQ 363
A EFL+F+++Q+ + L K A+ D P+ KS+ T +
Sbjct: 113 AHEFLNFLLNQLVETLEK-----------------EAKSDPTAPASPEKKSSDNGATGEE 155
Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
L + + IF G L + + + +A + FL L LDI E ++ LR FS+ E
Sbjct: 156 HPL-TWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDI--EQNSSVTSCLRNFSSTE 212
Query: 423 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
L + + A+K +KI+T +IL LHL RF Y Q KL V FPL+
Sbjct: 213 TLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLE 272
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L L P +E +Y L A V H G P+ GHY + + N WL FDD +V I
Sbjct: 273 LKLCNTAEDAPGSES-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDE 330
Query: 540 SKVL------------HDQAYVLFYK 553
S V D Y+LFY+
Sbjct: 331 SYVQTFFGSTQEYSNNTDHGYILFYE 356
>gi|353230425|emb|CCD76596.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 654
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 25/356 (7%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++N+ +Q+L V + G+ A V + G
Sbjct: 302 GLRNLGNTCYINSVVQSLSHTRALVHYFLD---------GFHERQAVVS-----NRLGYG 347
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS--GRPRQEDAQEFLSFIMDQMHD 320
K+ +L P+ +A L F V S Q+D+ EFL F++D +H+
Sbjct: 348 GEIVKHFEMLLSALYNQPNQ-DAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHE 406
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+L + + E N +T L E+ + + ++A + + F S + F G L+S
Sbjct: 407 DLNEARSEK---NNNSTKLKHNESMIEYTSSNEQAEAAWIQHKDFNNSIIVSSFQGLLRS 463
Query: 381 VVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVV 438
VK + S T F++L L I + D L+LF E + G R
Sbjct: 464 TVKCNSCHVTSTTFDVFMVLSLPIEQNKCQ-LTDCLKLFLEKEEMVGQCRWHCPSCNTRR 522
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K +++ L LI+HL RF Y K +V FP++ + +V P +Y
Sbjct: 523 DASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVDFPIECLDMSSFIVGPKLHSSEYA 582
Query: 499 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
L + + H G S GHYT R D +W +DD +V+ + +++ +D AY+LFY+
Sbjct: 583 LYSVLNHRGTMES-GHYTTFCRNIRDGRWYEYDDENVSLLDKNEIQNDNAYILFYE 637
>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
africana]
Length = 368
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 157/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 38 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 89
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 90 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 137
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 138 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 182
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 183 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 241 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 295
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 296 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 354
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 355 NSESGYILFYQ 365
>gi|321475285|gb|EFX86248.1| hypothetical protein DAPPUDRAFT_308438 [Daphnia pulex]
Length = 376
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 62/380 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + ++ ++ LT + T
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKMKN-KRSKETLLTCLADLFHNITT---- 79
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + + +P F A LK + N + Q+DA EFL+F+++ + E+
Sbjct: 80 --QKKKVGTI------APKKFIARLKKEKEEFDNYM-----QQDAHEFLNFLINHI-SEI 125
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA----------VTRTQSFLPSALSD 372
+ + T+ + T + + P N SA +T T + + + +
Sbjct: 126 ITAERHQTNNSATPTTNGKVQNSKD-----PCNGSASLKFDGSNGSMTSTGNHESTWVHE 180
Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
IF G L S + S + F L +D+ +I LR FS+ E L T +
Sbjct: 181 IFQGILTSETRCLNCETVSNKEEDFFDLQVDVDQNT--SITHCLRTFSSTETL---CTDN 235
Query: 432 TGNAGVVT----AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRD 485
V + A+K ++++ L IL LHL RF Y Q + K+ V FPL+L R
Sbjct: 236 KFKCDVCSSYQEAQKCMRVKKLPLILALHLKRFKYVEQYNRHIKVSHRVVFPLEL---RL 292
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV--- 542
+ R Y+LVA V H G P++GHY + + +D WL FDD V I S +
Sbjct: 293 FNTSEECPDRLYDLVAVVVHCGSGPNRGHYISIVKS-HDFWLLFDDDIVDKIDPSALEDF 351
Query: 543 ---------LHDQAYVLFYK 553
+ Y+LFY+
Sbjct: 352 YGLTSDVQKASETGYILFYQ 371
>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ailuropoda melanoleuca]
Length = 354
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 157/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 75
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 124 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 168
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 169 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 281
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 282 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 340
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 341 NSESGYILFYQ 351
>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
Length = 370
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 141 ----QEERKQEKQNGRLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
Length = 403
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 151/360 (41%), Gaps = 41/360 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
GL N GN C++N+ LQ L + LQ RD + ++ F + F T
Sbjct: 20 GLRNLGNTCYMNSILQCLSNTKELRDYCLQNQYLRDFNNNSRMRTAFMSEFAKLIQLFWT 79
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
S S SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 80 SSPNDS-------------VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHFPDDE------KSRQMWRRYQEREDSPVSDFFLGQL 171
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
KS + ++ S PF L L I Y E T+ L LF+ + L+G +
Sbjct: 172 KSSLTSSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMHCLPLFTKEDLLDGDEKPTCC 229
Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 230 RCKARTRCTKKFSIQKFPKILLLHLKRFSEARIRASKLTTFVDFPLKDLDLRE-FASQSC 288
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y+L H G ++ R +W F+D+ VT + ++ V AY+LFY
Sbjct: 289 NHAVYKLYGVSNHSGTTMGGHYHCLLKRPSPAEWHSFNDSRVTPMSSTHVRSSDAYLLFY 348
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 210
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFY 408
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 140/363 (38%), Gaps = 72/363 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P L + + +A G+ + A V SG
Sbjct: 1 GLSNLGNTCFLNSVLQCLTYTPPLAGYLDSGQHKATCRAAGFCAMCALQEHVRQALASSG 60
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
G+ SPS L+ + RQEDA E+L +++ +H+
Sbjct: 61 GA--------------VSPSTLVKNLRCISKSFR-----MWRQEDAHEYLRCLIEGLHNC 101
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L G K+ SAV++ +S + IFGG+L+S
Sbjct: 102 CLP--------------------------PGVKSNSAVSQERSLI----HKIFGGRLRSQ 131
Query: 382 VKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
VK S T P L L L+I ++ AL F+A E LEG Y S
Sbjct: 132 VKCTVCLTCSNTYDPLLDLSLEIVR--ADSLTKALNRFTAVEALEGDNKYHCSHCNKK-- 187
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP------- 490
V A K I IL + RFS K+ K + F GR L + P
Sbjct: 188 VRALKQFTIDKPPNILTIQFKRFSSTGSSGGKIDKKIEF------GRTLDLKPYISNPQV 241
Query: 491 -SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
SA KY L A + H G GHY R D W DD+ V + VL +AY+
Sbjct: 242 CSATDAKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKSVLDQKAYI 301
Query: 550 LFY 552
LFY
Sbjct: 302 LFY 304
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 161/391 (41%), Gaps = 63/391 (16%)
Query: 176 SSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELR 234
S+++ K +P++ + P +S++ GL N GN C+ NA +QAL+ P V + L +
Sbjct: 110 SALAPVKGLPLEWL--PQQSLRSF---GLRNLGNTCYANAVIQALLHTPPLVLKALSDGC 164
Query: 235 TRDIPKAGY-PTLTAFVGFVSDFDT--PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFT 291
P G+ + AFV PSG ++ +P+ +++N
Sbjct: 165 ASATPHTGFFDAMAAFVRLCRQLLVVRPSGTNA-------------VAPT---EIIRNLP 208
Query: 292 PDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETV 351
GR QEDA EFL F+++ + S S G DE
Sbjct: 209 AICRRYRVGR--QEDAHEFLRFLLESI--------ARSCSRRGERRLPSQQVSSDELVAS 258
Query: 352 GPKNKSA-VTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVH 409
+ + +TR IFGG L+S V+ S + FL L LD A
Sbjct: 259 DCNHGTGWITR-----------IFGGLLRSRVICRTCQHKSYRTERFLDLSLDFRQSA-- 305
Query: 410 TIEDALRLFSAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
+I L F+A E L G R G A+K ++I+ +L LHL RF
Sbjct: 306 SISKCLEHFAATELLAGRNRYDCAACHGYSDAEKQIRIRQAPVVLTLHLKRF----HALR 361
Query: 469 KLHKSVRFP----LQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND 524
KL VRF L+ + + + P Y L A + H G S GHY A R +
Sbjct: 362 KLSGVVRFSEWLDLRPYMAEEFVAGPVM----YRLFAVIVHEGHSLSSGHYYAFVRSASG 417
Query: 525 QWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
WL DD ++ +G V QAY+LFY +V
Sbjct: 418 AWLRCDDEHLSRVGIGSVFAQQAYLLFYLRV 448
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 142/356 (39%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 152
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 153 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 201
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG+L+S
Sbjct: 202 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 231
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI ++ AL+ F+A E L+G Y+
Sbjct: 232 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 288
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 289 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 345
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 346 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 401
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 174/392 (44%), Gaps = 45/392 (11%)
Query: 175 NSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQEL 233
N +SG+ N V S + GL N GN CF+N+ LQ L + P ++ LL E
Sbjct: 95 NLGLSGNSPRSSAGKNRNVSSTEKGGLNGLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEE 154
Query: 234 RTRD----IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKN 289
D I + AF + + P +++ K I+ + F++ ++
Sbjct: 155 YMTDINFTISAMKGSLIKAFSNVIQELWAP---NAEDKIINTTN---------FKSQIQK 202
Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWE 349
F P Q+DAQEFL ++++ +H+++ ++ + I L + D+
Sbjct: 203 FAPRFMGYA-----QQDAQEFLRYLLEGLHEDVNRVTVKPQQI---------LTDIDDSL 248
Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAV 408
+ K A R S + DIF GQLKS ++ S T PF L L + S
Sbjct: 249 SDNQKATEAWKRYLRMDDSKVVDIFVGQLKSTLQCTVCGHCSVTFDPFWDLSLPVPSRTG 308
Query: 409 H-TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQG 466
++ L F+ E L+G + KS IQ KIL+LHL RFS +
Sbjct: 309 QPKLQSCLDAFTKEEVLDGEEKPTCSKCETRRKCTKSFSIQKFPKILVLHLKRFSPTERY 368
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSA----EGRKYELVATVTHHGRDPSKGHYTADARY- 521
KL +V FPL +L ++P A +G Y L A H G GHYTA ++
Sbjct: 369 RGKLSITVDFPLT-----NLDLSPYAANKGQGCTYNLYAISNHSG-TAYGGHYTAYCKHP 422
Query: 522 FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
++ W ++D+ V+++ + V+ +AYVLFY+
Sbjct: 423 YSGNWHEYNDSRVSSLSSRSVVSGEAYVLFYE 454
>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
domestica]
Length = 376
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 46 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 97
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 98 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 145
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 146 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 190
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 191 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 307
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 308 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 366
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 367 GYILFYQ 373
>gi|12847085|dbj|BAB27431.1| unnamed protein product [Mus musculus]
Length = 569
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 203 GLINSGNL---CFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSD 255
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTLPQCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGA 271
Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
P D +P+ F AV + + P S SG Q+DAQEFL +M
Sbjct: 272 LWHP-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLM 313
Query: 316 DQMHDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSF 365
+++H E+ + + I + +L EE E N K + R
Sbjct: 314 ERLHLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED-- 371
Query: 366 LPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSA 420
S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+
Sbjct: 372 --SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTK 429
Query: 421 PENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
E LE T + K + +Q +IL+LHL RFS K V FPLQ
Sbjct: 430 EEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQ 489
Query: 480 -LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 538
L LG + A Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 490 RLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVS 545
Query: 539 TSKVLHDQAYVLFYK 553
++V + YVLFY+
Sbjct: 546 ENQVASSEGYVLFYQ 560
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 160/392 (40%), Gaps = 77/392 (19%)
Query: 188 AINEPVKSVKDLL------------------PRGLINSGNLCFLNATLQALMSCSPFVQ- 228
AI+ P+K KD+L P GL+N GN CF N LQ L P V
Sbjct: 152 AISRPIKQAKDVLFPYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAY 211
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LL++ R+ + L F V ++ +S + FSP + L
Sbjct: 212 LLEKGHRRECSCNDWCFLCEFENHV-----------ERTRLS----SQAFSPMNILSRL- 255
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
P++ ++ G +QEDA EF+ F +D M L G ++
Sbjct: 256 ---PNIGGTL-GYGKQEDAHEFMRFSIDTMQSVCLDEFGGEKAV---------------- 295
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEA 407
P N T Q IFGG+L+S V+ + +K S + + L ++I+ +A
Sbjct: 296 ----PPNLQETTLIQH--------IFGGRLQSEVICTKCDKISNQYENMMDLTVEIHGDA 343
Query: 408 VHTIEDALRLFSAPENLEGYRT-SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
++E+ L F+A E L+G G V A K + ++ IL + L RF G G
Sbjct: 344 A-SLEECLDQFTAKERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRFQSGRFG 402
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK-YELVATVTHHGRDPSK--GHYTADARYFN 523
KL+K + FP L L ++ + +G Y+L V H + GHY + F
Sbjct: 403 --KLNKRIAFPETLNLSP--YMSEAGDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFQ 458
Query: 524 DQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
W DD V + +VL AY+L Y +
Sbjct: 459 GNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRC 490
>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 370
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 161/373 (43%), Gaps = 67/373 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD-I 139
Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N + S +N +++ P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGRLPNGCIDS------------ENNNSLPD-----PTWVHEIFQGTLTN 182
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 183 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 240
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 241 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATN 295
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 296 PDRMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDI 354
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 355 SKNSESGYILFYQ 367
>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
[Oryctolagus cuniculus]
Length = 475
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 145 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 196
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 197 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 244
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 245 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 289
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 290 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 347
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 348 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 406
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 407 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 465
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 466 GYILFYQ 472
>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Cricetulus griseus]
Length = 450
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 160/367 (43%), Gaps = 55/367 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 120 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 171
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 172 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 219
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG L D V ++ ++ P+ + +IF G L +
Sbjct: 220 LQEERKQEKQNG------RLRNGD----VDTEDNNSTPD-----PTWVHEIFQGTLTNET 264
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 265 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 322
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 323 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 381
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 382 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 440
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 441 GYILFYQ 447
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 165/410 (40%), Gaps = 86/410 (20%)
Query: 181 SKEVPMKAINE-PVKSVK---DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--- 233
SKE PMK +N P K K ++ GL N GN CF+NA LQ+L + F +EL
Sbjct: 124 SKESPMKKLNRSPSKENKAGNNVRTVGLRNLGNTCFMNAILQSLSNLKYFSGYFKELPAI 183
Query: 234 ----RTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAV 286
+ D Y T + + SD D +K ++ G SP S+F V
Sbjct: 184 ELNVKNMDEQTKKYYTRS----YQSD-DISLVEELRKVLCALWQQGSNTAISPESLFTVV 238
Query: 287 LKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED 346
K V G +Q DA EF+ ++D++H+ELL NG +T +
Sbjct: 239 WK-----VVPRFRGY-QQHDAHEFMHCLLDRVHNELL---TSKRFTNGCDTII------- 282
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDI-- 403
S IFGGQL+S V S + + L LDI
Sbjct: 283 ------------------------SGIFGGQLQSDVTCLTCGTISKKQEAYRDLSLDIPF 318
Query: 404 -----------YSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTL 449
+ + + D L+ F E L E Y T K I L
Sbjct: 319 KPKLKTSPGKKKTPSACQLIDCLQSFVEMETLDESEWYMCEKCNKKQPST--KKFWILRL 376
Query: 450 SKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRK------YELVAT 502
+L LHL RF Y TK+ VRFP+ +L + +L T R Y+L A
Sbjct: 377 PNVLCLHLKRFRYSPLARTKVDTFVRFPIKELNMDPFILKTNQKTNRMSIKAHLYDLAAC 436
Query: 503 VTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
V HHG GHYT AR+ W +F+D+SV+ + H +AY+LFY
Sbjct: 437 VVHHGSGAGSGHYTTYARH-EGSWYNFNDSSVSLTNEESIQHCKAYILFY 485
>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
Length = 353
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 157/371 (42%), Gaps = 64/371 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFRD--KVLAYKSQPRKKENLLTCLA------DLFHSI 75
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + +NKS P+ + +IF G L +
Sbjct: 124 LQEERKQEKQNGRLPN----------GNIDNENKSPPD------PTWVHEIFQGTLTNET 167
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 168 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 280
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 281 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 339
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 340 NSESGYILFYQ 350
>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
caballus]
Length = 414
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 157/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 84 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 135
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 136 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 183
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 184 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 228
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 229 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 286
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 287 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 341
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 342 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 400
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 401 NSESGYILFYQ 411
>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
mutus]
Length = 353
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 155/371 (41%), Gaps = 64/371 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 75
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG P + P+ + +IF G L +
Sbjct: 124 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 167
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 168 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 280
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 281 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 339
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 340 NSESGYILFYQ 350
>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
[Desmodus rotundus]
Length = 374
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 44 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 95
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 96 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 144
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + + + E P P+ + +IF G L +
Sbjct: 145 ----QEERKQEKQNGRLPNGSVDSENNHSTPD------------PTWVHEIFQGTLTNET 188
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 189 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 246
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 247 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 301
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 302 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 360
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 361 NSESGYILFYQ 371
>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
garnettii]
gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
caballus]
Length = 370
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 157/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|393907557|gb|EFO20320.2| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 406
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 164/376 (43%), Gaps = 47/376 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
GL+N GN C+ N+ +QAL C PF +Q Q+L+ ++G F
Sbjct: 32 GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLKKSYDKESGREKENLLTCLADLFHN 91
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+++KK + + +P F LK N I Q+DA EFL+++++ +
Sbjct: 92 I---ATQKKRVGTI------APKRFITKLKK-----ENGIFDNFSQQDAHEFLNYLLNTI 137
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA--LSDIFGG 376
+ L + + T + + + P A + S A + +IF G
Sbjct: 138 SETLAEEKKIEKMEKILRTN--GMTRKGASVILPPCESLAFCQPSSSKSDATWIQEIFQG 195
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
L + + S+ + FL L +D+ A +I LR+FS E L+G + N
Sbjct: 196 TLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSDMETLQGEQKYYCENC 253
Query: 436 GVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSA 492
A+K ++I+ L ++L LHL RF Y Q + TKL V FPL+L L V+ A
Sbjct: 254 CSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRLFN---VSDDA 310
Query: 493 --EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI---------GTSK 541
R Y+L A V H G P++GHY + N WL FDD V I G S+
Sbjct: 311 VNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHN-FWLLFDDDIVDKIDPMAIEDFFGLSE 369
Query: 542 V----LHDQAYVLFYK 553
+ AY+LFY+
Sbjct: 370 CGVQKNSESAYILFYE 385
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 269 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 322
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 323 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 368
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 369 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 413
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 414 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 471
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 472 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 530
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 531 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 589
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 590 GYILFYQ 596
>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
Length = 369
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 155/371 (41%), Gaps = 64/371 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG P + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 183
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 296
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 297 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 355
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 356 NSESGYILFYQ 366
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 138/356 (38%), Gaps = 61/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LL R + + + SG
Sbjct: 123 GLSNLGNTCFLNSALQCLTYTPPLTNYLLSREHGRTCAHGSFCMMCTMQNHMIQTFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K P S ++++ N GR QEDA EFL + +D M
Sbjct: 183 NAIK-----------PLS------IIRDLKKISHNLRFGR--QEDAHEFLRYTIDAMQKA 223
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L NG L + + T+ + IFGG L+S
Sbjct: 224 CL---------NG----YTKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
VK + S T P+L + L++ E I AL LF PE L G YR S
Sbjct: 253 VKCLECKTVSDTYDPYLDVTLEV--ERAANIVRALELFVKPEQLGGDNAYRCSMCRKK-- 308
Query: 438 VTAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V A K I S +L + L RF S S G K+ K V +P L + R + P +
Sbjct: 309 VLASKRFTIHRASNVLTISLKRFGSCSSSGGRKITKDVGYPEFLDI-RPFMSEPKGDPIT 367
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N QW +D V VL+ QAYVLFY
Sbjct: 368 YGLYAVLVHSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSNIKVVLNQQAYVLFY 423
>gi|224143963|ref|XP_002325138.1| predicted protein [Populus trichocarpa]
gi|222866572|gb|EEF03703.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 143/357 (40%), Gaps = 63/357 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ +Q L P LQ + ++ AG+ L A VS SG
Sbjct: 110 GLENLGNTCFLNSVVQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSRALQSSG 169
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
S K++ S + +NF RQEDA E++ +++ MH
Sbjct: 170 RSLVPKDLV----------SNLRCISRNFR---------NARQEDAHEYMVNLLESMHKC 210
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S +LV IFGG L+S
Sbjct: 211 CLPSGVPSESPAAYEKSLVH------------------------------KIFGGHLRSQ 240
Query: 382 VKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
V+ Q + S PFL L L+I T+ ALR F+A E L+G Y+
Sbjct: 241 VECQQCSYCSNKFDPFLDLSLEI--AKADTLPVALRNFTAAEVLDGGEKQYQCQRCKQK- 297
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 495
V AKK + + +L +HL RF G K+ K V F L + V+ S EG
Sbjct: 298 -VRAKKRLTVHKAPHVLTIHLKRFHAHDPGR-KVDKKVIFDRSLDI--KPFVSGSYEGEL 353
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY L + H+G + GHY R ++ W +D V + VL +AY+LFY
Sbjct: 354 KYSLYGVLVHYGHNTHSGHYVCFVRTSSNMWHLLNDNQVRQVSEKTVLEQKAYMLFY 410
>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Danio rerio]
Length = 383
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 157/371 (42%), Gaps = 50/371 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKIQ--PRRKESLLTCLA------DLFNSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + + NG +TQ + + +IF G L +
Sbjct: 141 QEEKSQERQQNGKVVQNGGSGSGGGGSGSSTGEGETEEKTQQ---TWVHEIFQGTLTNET 197
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 198 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 255
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 256 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 310
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 311 RLYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 369
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 370 NSESGYILFYQ 380
>gi|158300486|ref|XP_320388.3| AGAP012139-PA [Anopheles gambiae str. PEST]
gi|157013182|gb|EAA00200.3| AGAP012139-PA [Anopheles gambiae str. PEST]
Length = 367
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 49/369 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + ++ + TL + + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--RRTKETLLSCLA-----DLFYSI 77
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + + +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 78 ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + ++ + AN D + N + + + + P+ + +IF G L S
Sbjct: 127 LAERNQAKAGGAANGP-------DLNGGLNGGNGGSSSNSGNTEPTWVHEIFQGILTSET 179
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVTA 440
+ S+ + F L +D+ + +I LR FS E L N A
Sbjct: 180 RCLNCETVSSKDENFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEA 237
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 238 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 294
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 295 YDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSS 353
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 354 ETGYILFYQ 362
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|268573334|ref|XP_002641644.1| Hypothetical protein CBG09971 [Caenorhabditis briggsae]
Length = 415
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 162/363 (44%), Gaps = 54/363 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ +QAL C PF + + R + + K+G T F + +
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKMLNYR-QTLKKSGTSKETLMTCLADLFHSIAN- 85
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+K+ + + +P F LK N + Q+DA EF +++++ + + L
Sbjct: 86 --QKRRVGTI------APKRFITKLKKENESFDNYV-----QQDAHEFFNYLLNSISEAL 132
Query: 323 L---KLQGESTSINGA------------NTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
+ K + E +S +G TA +S E + T G ++ T
Sbjct: 133 ITDKKAEREKSSRHGTIKKGNVTVNMSPATAGISKDERERNGTEGSDSRPEST------- 185
Query: 368 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
+ +IF G L + K + S + FL L +D+ E +I LR+FS E L G
Sbjct: 186 -WIHEIFEGILTNETKCLSCDTKSCKDENFLDLSIDV--EQNTSITHCLRVFSETETLCG 242
Query: 427 ---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLV 481
Y + + A+K ++I+ ++L LHL RF Y TKL V FPL+L
Sbjct: 243 DQKYYCETCSSKQ--EAQKRMRIKKPPQLLALHLKRFKYVDSLNRHTKLSYRVVFPLELR 300
Query: 482 LGRDLLVTPSAE--GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
L V+ AE + Y+LVATV H G P++GHY + N WL FDD V +
Sbjct: 301 L---FNVSDDAEEADQIYDLVATVVHCGATPNRGHYITLVKS-NSFWLVFDDDIVEKLDV 356
Query: 540 SKV 542
S +
Sbjct: 357 SSM 359
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 142/356 (39%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + TR+ + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGFCMLCVMQNHMIQAFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K P F LK QEDA EFL +I+D M
Sbjct: 183 NAIK--------------PVSFIRDLKKIARHFRFG-----NQEDAHEFLRYIIDAM--- 220
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ +NG L + + T+ + IFGG L+S
Sbjct: 221 ------QKACLNG----YTKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 310
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + + + Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSNGDPIMYGL 367
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 423
>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
Length = 361
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 31 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 82
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 83 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 131
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 132 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 175
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 176 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 233
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 234 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 288
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 289 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 347
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 348 NSESGYILFYQ 358
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|224121556|ref|XP_002330730.1| predicted protein [Populus trichocarpa]
gi|222872506|gb|EEF09637.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 147/363 (40%), Gaps = 64/363 (17%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
P GL N GN C+LN+ LQ L P L+ + + S
Sbjct: 16 PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCNS----------------LAS 59
Query: 261 GGSSKKKNISVLD--IGRPFS-------PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
G + +L+ I R S PS + LK F RQEDA EFL
Sbjct: 60 GDRKRDCPFCILEKQIVRSLSSDLAHDVPSKIRSCLKIFAEHFRCG-----RQEDAHEFL 114
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+++D H+ L+L+ S W+ + +V +
Sbjct: 115 RYVIDACHNTCLRLKKLS------------------WKGIENGGDGSVVKK--------- 147
Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
IFGG L+S VK N S V + + LD+ + +++ DA++ F PE L+G
Sbjct: 148 -IFGGALQSQVKCLCCNCESNKVDEIMDISLDVLNS--NSVRDAMQKFFQPEVLDGNNKY 204
Query: 431 STGNAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVT 489
N +V A+K + + +L++ L RF G G K+ K++ F LVL + T
Sbjct: 205 KCENCKKLVAARKQMSVLQAPNVLVIQLKRFE-GIFGG-KIDKAIAFEEVLVLSSFMSKT 262
Query: 490 PSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
KY L + H G GHY A + QW +D+ VT +V+ ++AY+
Sbjct: 263 SQDPQPKYNLFGIIVHSGYSLEAGHYYAYIKDAIGQWYCCNDSYVTLSTLQEVMSEKAYI 322
Query: 550 LFY 552
LF+
Sbjct: 323 LFF 325
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 211
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
Length = 364
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 153/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 34 GLVNFGNTCYCNSVLQALYFCRPFRD--KVLAYKSQPRKKESLLTCLA------DLFHSI 85
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 86 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 134
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + + E P P+ + +IF G L +
Sbjct: 135 ----QEERKQEKQNGRLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 178
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 179 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 236
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 237 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 291
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 292 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 350
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 351 NSESGYILFYQ 361
>gi|356556930|ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 652
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 151/360 (41%), Gaps = 56/360 (15%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSP---FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
P GL N GN C+LN+ LQ L P F LQ D + P
Sbjct: 23 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCDSSASSCPFCIL--------- 73
Query: 258 TPSGGSSKKKNISVLDIGRPF-SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+K+ L + + +PS ++ ++ F N GR QEDA EFL +++D
Sbjct: 74 -------EKQIARSLRLDLTYDAPSKIQSCIRIFAE---NFRCGR--QEDAHEFLRYVID 121
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
H+ L+L+ AN + + +IFGG
Sbjct: 122 ACHNTCLRLKKLRRKGAEANGGGGGDTGGG---------------------TVVKEIFGG 160
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
L+S VK S V + + LD++ ++++D+++ F PE L+G Y+ S
Sbjct: 161 ALQSQVKCLCCGYESNKVDEIMDISLDVFHS--NSLKDSMQKFFQPEVLDGNNKYKCDSC 218
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+V AKK + I IL++ L RF G G K+ K+V F LVL +
Sbjct: 219 KK--LVAAKKQMSILQAPNILVIQLKRFE-GILGG-KIDKAVAFEEVLVLSSFMCKASQD 274
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+Y+L T+ H G P GHY A + +W DD+ VT +VL ++ Y+LF+
Sbjct: 275 PQPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFF 334
>gi|148707161|gb|EDL39108.1| ubiquitin specific peptidase 21, isoform CRA_b [Mus musculus]
Length = 566
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 158/372 (42%), Gaps = 48/372 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
LE T + K + +Q +IL L L RFS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSTSRGSIKKSSVGVDFPLQRLS 489
Query: 482 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 541
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 490 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 545
Query: 542 VLHDQAYVLFYK 553
V + YVLFY+
Sbjct: 546 VASSEGYVLFYQ 557
>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Loxodonta africana]
Length = 367
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 152/378 (40%), Gaps = 65/378 (17%)
Query: 192 PVKSVKDLLPR-----GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPT 245
PV V + P GL N GN C++NA LQ L S SP V+ L + K+
Sbjct: 29 PVNEVDEDQPHFQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKSCGEV 88
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
TAF ++D G SP +F + L N P + Q+
Sbjct: 89 ATAFAYLMTDMWLGDSGC--------------VSPEIFRSALGNLYPAF-----MKKTQQ 129
Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
DAQEFL ++++ +H+ L K S + V T+S
Sbjct: 130 DAQEFLIYVLNDLHEALKKYHRRSYEKGSTR-----------------RCCRKVIATES- 171
Query: 366 LPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
S ++ +F GQL V+ + S + F +L L I SE +++D L+ F + L
Sbjct: 172 --SIITRLFEGQLNYDVICLKCENCSYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTL 229
Query: 425 EGYRTSSTGNAGVVTAKKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
++ + K+ ++ KI+I HL RF KL + +PL
Sbjct: 230 TW---NNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDVQGTMKRKLRTHIHYPLT- 285
Query: 481 VLGRDLLVTPSA-----EGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASV 534
+L +TP + KY L A V H G D GHYTA R Q W FDD V
Sbjct: 286 ----NLDLTPYICPIFRKHPKYSLCAVVNHFG-DLDGGHYTAFCRNSVTQAWYSFDDTRV 340
Query: 535 TAIGTSKVLHDQAYVLFY 552
+ I + V AY+LFY
Sbjct: 341 SEIPNTSVQTATAYLLFY 358
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 148/359 (41%), Gaps = 73/359 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P +L + ++ + TL A ++ G
Sbjct: 82 GLQNMGNTCYVNAALQCLTYTPPLASYMLSQQHSKTCQNQRFCTLCAMQVHITRALYHPG 141
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQEFLSFIMDQMH 319
D+ +P +P ++G R RQEDA EFL F +D M
Sbjct: 142 -----------DVIQP----------------LPELVTGFHRRRQEDAHEFLMFTLDAMQ 174
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L E++ V + + + R IFGG +
Sbjct: 175 QACL----------------------SEYKQVDGHSDNTLVR----------QIFGGYWR 202
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
S ++ + S T P+L + LDI +A ++ AL PE L+G Y S
Sbjct: 203 SQIQCLHCHGVSDTFDPYLDVTLDI--KAALSVNQALEQLVKPEKLDGENSYHCSMCLKK 260
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
V A K++ + T SK+L+L L RFS + +K+ K V++P L + + + ++
Sbjct: 261 --VPASKTLTLHTSSKVLMLLLKRFSNFT--GSKMPKDVQYPEYLDM-QQYMSQQNSGPL 315
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G GHY + N QW DDA VTA + L AYVLFY Q
Sbjct: 316 LYVLYAVLVHAGWSCHNGHYFCYIKAGNGQWYKMDDAKVTACDVTSALSQCAYVLFYIQ 374
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + +A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S + L L +++ K + + S + D+F GQL
Sbjct: 371 HNEVNRVTVRPKS---SPEGLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENI 537
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 596
Query: 552 YK 553
Y+
Sbjct: 597 YE 598
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 147/356 (41%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + TR+ + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGFCMLCVMQNHMIQAFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL +I+D M
Sbjct: 183 NAIKPVSF-IRDLKK---------IARHFRFG---------NQEDAHEFLRYIIDAM--- 220
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ +NG L + + T+ + IFGG L+S
Sbjct: 221 ------QKACLNG----YTKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 310
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + + + Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSNGDPVMYGL 367
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 423
>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
Length = 486
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 152/367 (41%), Gaps = 56/367 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + L + P+ LT T
Sbjct: 157 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 210
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 211 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 256
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG P + P+ + +IF G L +
Sbjct: 257 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 300
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 301 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 358
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 359 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 417
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 418 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 476
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 477 GYILFYQ 483
>gi|441624164|ref|XP_003270353.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Nomascus
leucogenys]
gi|3220154|gb|AAC23551.1| ubiquitin hydrolyzing enzyme I [Homo sapiens]
Length = 355
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 76
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 125
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 126 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 169
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 228 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 282
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 283 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 341
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 342 NSESGYILFYQ 352
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 145
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG DI +P + S + +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DIMKP--------------SQILTSAFHKYQQEDAHEFLMFTLETMH 180
Query: 320 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ L++ Q E TS ED S + DIFGG
Sbjct: 181 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 207
Query: 378 LKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
+S +K QG S T PFL + LDI S ++ AL E L G G
Sbjct: 208 WRSQIKCLLCQGT--SDTYDPFLDVPLDISS--AQSVNQALWDTEKSEELHGENAYYCGR 263
Query: 435 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+A
Sbjct: 264 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSQPTAG 320
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A + H G GHY + + +W DD VT + VL++ AYVLFY
Sbjct: 321 PLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYV 380
Query: 554 Q 554
Q
Sbjct: 381 Q 381
>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
Length = 379
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 160/370 (43%), Gaps = 59/370 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL+ + CF+N+ LQ L + LQ L RD+ G+ T A + +F
Sbjct: 42 GLLLNKAKCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 92
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 93 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 143
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
H+E+ N V E P ++ + +L S + D+F
Sbjct: 144 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 190
Query: 376 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG---- 426
GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 191 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 248
Query: 427 --YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
YR + K +Q KIL+LHL RFS ++KL V FPL+ + R
Sbjct: 249 TCYRCRARKRC-----IKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLR 303
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVL 543
+ + + Y L A H G GHYTA R +W F+D+SVT + +S+V
Sbjct: 304 E-FASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVR 361
Query: 544 HDQAYVLFYK 553
AY+LFY+
Sbjct: 362 TSDAYLLFYE 371
>gi|303272151|ref|XP_003055437.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463411|gb|EEH60689.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 364
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 160/400 (40%), Gaps = 96/400 (24%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
RGL N GN CFLN+ +Q L PF F+S+ P+
Sbjct: 9 RGLQNLGNTCFLNSCVQCLAHAPPFSDY----------------------FLSE---PAY 43
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR------PR------------ 303
+KK I +P+M EAV+K P+ S R PR
Sbjct: 44 PRRRKKTI--------LAPAM-EAVVKAIHDANPSVASARRVAAHNPRGLLRAMDDVPPL 94
Query: 304 -------QEDAQEFLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPK 354
Q D+QEFL +++ ++DEL ++ + T ++ + W +
Sbjct: 95 DLFTDRDQHDSQEFLRMLLENLNDELNVVEKPPPYREEKDDFTEPENVKADRLWAQYVAR 154
Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE- 412
S +TRT F GQL+S V+ + S + PF L L + + ++
Sbjct: 155 CDSVMTRT-----------FAGQLRSSVECHKCGTCSTSYDPFWDLSLPLRASKKGSVGG 203
Query: 413 -----------DALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRF 460
D LR F+ E LEG T + V +A K ++++ ++L++HL RF
Sbjct: 204 GGGGAGPIGVIDCLRAFTEDETLEGSDTRTCPKCKVKGSATKRLRVKRWPRVLVIHLKRF 263
Query: 461 SYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSK 512
++G G K+ +V P L LG D L + EG KY+L A H G
Sbjct: 264 TWGKSGRPGKKMDAAVDVPYDLSLG-DFLADDALEGGRGLHPPKYKLFAVTNHMG-SLGG 321
Query: 513 GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
GHYTA +W F+D + + + AYVLFY
Sbjct: 322 GHYTASCEVGGGKWFTFNDENCSGEDGPPRVSKHAYVLFY 361
>gi|345319054|ref|XP_001519444.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12
[Ornithorhynchus anatinus]
Length = 368
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 38 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 89
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 90 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD-I 137
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + D P + P+ + +IF G L +
Sbjct: 138 LQEERKQEKQNGR----LPNGNLDSENNNSPPD-----------PTWVHEIFQGTLTNET 182
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 183 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 241 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGGATNPDRMYD 299
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 300 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 358
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 359 GYILFYQ 365
>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
vinifera]
Length = 942
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 147/367 (40%), Gaps = 70/367 (19%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
+L P GL+N GN C+ NA LQ L P LLQ L ++ PK + + F +
Sbjct: 393 ELSPFGLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKACPKEDWCFICEFECLI--L 450
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ G S P SP + ++ + G R+EDA EFL + +D
Sbjct: 451 EAREGKS-------------PLSPMGILSQIQRIGSHL-----GHGREEDAHEFLRYAVD 492
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK G + +T LV L FGG
Sbjct: 493 TMQSVCLKDTGVVGPL-AEDTTLVGLT------------------------------FGG 521
Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
L S +K + S + + L ++I + + T+E+AL F+A E L+G G
Sbjct: 522 YLLSKIKCMKCQGKSERCERMMDLTVEIDGD-IGTLEEALAQFTATEILDGENKYQCGRC 580
Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
AKK + + IL + L RF + G KL+KSVRFP L L TP G
Sbjct: 581 RSYEKAKKKLMVLEAPNILTIVLKRFQSSNFG--KLNKSVRFPETLNL------TPYMSG 632
Query: 495 RK-----YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
Y L A V H GHY + F W DD++VT + +VL + A
Sbjct: 633 TDDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGA 692
Query: 548 YVLFYKQ 554
Y+L Y +
Sbjct: 693 YMLLYAR 699
>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 359
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 170/410 (41%), Gaps = 76/410 (18%)
Query: 164 IDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSC 223
++G NA+A I G ++ P +NE GL+N GN C+ N+ LQAL C
Sbjct: 3 VEGEGANASALEKEI-GPEQFP---VNEHY--------FGLVNFGNTCYCNSVLQALYFC 50
Query: 224 SPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMF 283
PF + L + P+ LT D +++KK + V+ P F
Sbjct: 51 RPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSIATQKKKVGVI------PPKKF 96
Query: 284 EAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA 343
L+ N + Q+DA EFL+++++ + D +L+ + + NG +
Sbjct: 97 ITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-ILQEERKQEKQNGR----LPNG 146
Query: 344 EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLD 402
D P P+ + +IF G L + + S+ + FL L +D
Sbjct: 147 NIDNENNSPPD------------PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVD 194
Query: 403 IYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
+ E +I LR FS E L Y+ A K +K++ L IL LHL RF
Sbjct: 195 V--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFK 252
Query: 462 YGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG----RKYELVATVTHHGRDPSKGHY 515
Y Q TKL V FPL+L L S + R Y+LVA V H G P++GHY
Sbjct: 253 YMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHY 307
Query: 516 TADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
A + +D WL FDD V I + + Y+LFY+
Sbjct: 308 IAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 356
>gi|312083170|ref|XP_003143749.1| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 389
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 162/381 (42%), Gaps = 74/381 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
GL+N GN C+ N+ +QAL C PF +Q Q+L+ ++G F
Sbjct: 32 GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLKKSYDKESGREKENLLTCLADLFHN 91
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+ ++KK + + D NF+ Q+DA EFL+++++ +
Sbjct: 92 IA---TQKKRVGIFD---------------NFS------------QQDAHEFLNYLLNTI 121
Query: 319 HDELLKLQGESTSINGANT-------ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+ L + + T A V L + P +KS T Q
Sbjct: 122 SETLAEEKKIEKMEKILRTNGMTRKGASVILPPCESLAFCQPSSKSDATWIQ-------- 173
Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
+IF G L + + S+ + FL L +D+ A +I LR+FS E L+G +
Sbjct: 174 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSDMETLQGEQKY 231
Query: 431 STGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLL 487
N A+K ++I+ L ++L LHL RF Y Q + TKL V FPL+L L
Sbjct: 232 YCENCCSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRLFN--- 288
Query: 488 VTPSA--EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI-------- 537
V+ A R Y+L A V H G P++GHY + N WL FDD V I
Sbjct: 289 VSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHN-FWLLFDDDIVDKIDPMAIEDF 347
Query: 538 -GTSKV----LHDQAYVLFYK 553
G S+ + AY+LFY+
Sbjct: 348 FGLSECGVQKNSESAYILFYE 368
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 211
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 145/354 (40%), Gaps = 61/354 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CFLN+ LQ L P V L K VGF +
Sbjct: 127 GLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEHAHTCKQ--------VGFCMVCELQRHF 178
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+N G+ P A+L+ + GR QEDA EFL +++D M
Sbjct: 179 RRCYENG-----GQAIKP---HAILQKIKLIAKHMHWGR--QEDAHEFLRYVIDAM---- 224
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + +NG NT L +++E + ++ IFGG L+S V
Sbjct: 225 -----QKSCLNG-NTKLDRISKET---------------------TVINQIFGGFLRSQV 257
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE---GYRTSSTGNAGVV 438
KA S T PFL + +D+ + V I+ A F PE L+ Y + V
Sbjct: 258 VCLKCKAKSNTYDPFLDISVDV--KNVPNIQKAFEKFVQPEQLDLDNAYNCTKCKQK--V 313
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A+K I S +L + L R YG G K+ + + FP +L + R + Y+
Sbjct: 314 AAQKRFTIHKPSNVLTIQLKR--YGVMGG-KVTRHISFPEKLNI-RPYMSVSQGAAITYQ 369
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G + GHY R N W +D+ V +VL+ +AY+LFY
Sbjct: 370 LYAVLVHMGHSTNSGHYYCYVRSSNQAWYCMNDSMVQQTSQGRVLNSEAYMLFY 423
>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
Length = 370
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 153/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRD--KVLAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + + E P P+ + +IF G L +
Sbjct: 141 ----QEERKQEKQNGRLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
boliviensis boliviensis]
Length = 413
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 83 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 134
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 135 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 183
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 184 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 227
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 228 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 285
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 286 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 340
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 341 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 399
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 400 NSESGYILFYQ 410
>gi|395737001|ref|XP_003776847.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Pongo abelii]
Length = 997
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 112/251 (44%), Gaps = 13/251 (5%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
Q+D+QEFL F+MD +H++L K T N L + A + +
Sbjct: 735 QQDSQEFLLFLMDGLHEDLNKTDNRKTYKEENNDHLNYFKAAEH----------AXQKHK 784
Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
S + +F GQ KS V+ +K S T + F+ L L I S + T+ D LRLFS E
Sbjct: 785 RLNESIIVVLFQGQFKSTVQCLTRHKKSRTFEAFMYLSLLIASTSNCTLXDCLRLFSKEE 844
Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
L + +I L +L++HL FSY + KL SV FPL+ +
Sbjct: 845 KLIDNNRFYCNHCRAQWDSXKEEIWKLPPVLLVHLKHFSYNGRWKQKLQTSVDFPLENLA 904
Query: 483 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSK 541
++ P +KY L + H G GHYTA + Q W FDD ++ I S
Sbjct: 905 LSQYVIGPKNNLKKYNLFSVSDHCG-GLDGGHYTAYCKNAAKQRWFKFDDHEISDISVSS 963
Query: 542 VLHDQAYVLFY 552
V AY+LFY
Sbjct: 964 VKSSAAYILFY 974
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 149/367 (40%), Gaps = 67/367 (18%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
+ P GL N GN CF N LQ L P V LL+ R+ + + L F +
Sbjct: 1 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 57
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ N S PFSP + L N ++ G RQEDA E + F +D
Sbjct: 58 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 100
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIFG 375
M L DE+ E V P T Q IFG
Sbjct: 101 MQSVCL----------------------DEFGGEKVVPPRAQETTLIQY--------IFG 130
Query: 376 GQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
G L+S V+ + S + + L ++I+ +AV ++E+ L F+A E L+G Y+
Sbjct: 131 GLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDR 189
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
+ V A K + I+ IL + L RF G G KL+K + FP LG ++
Sbjct: 190 CDD--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGP--YMSGG 243
Query: 492 AEGRK-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAY 548
EG Y+L A + H + GHY + F W DD+ V + VL +AY
Sbjct: 244 GEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAY 303
Query: 549 VLFYKQV 555
+L Y +V
Sbjct: 304 MLLYSRV 310
>gi|19913514|gb|AAH26072.1| Ubiquitin specific peptidase 12 [Homo sapiens]
gi|123994797|gb|ABM85000.1| ubiquitin specific peptidase 12 [synthetic construct]
Length = 370
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 141 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVDEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 56/375 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CFLN+++Q L + P R + + G ++
Sbjct: 108 GLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRS--EINHDNFLGSKGALA-------- 157
Query: 263 SSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SS + + L +G+ +SP F++ L F P S +Q DAQE L++++D MH
Sbjct: 158 SSYAEVVKHLWLGQGAQHYSPGRFKSSLAKFAPQFDGS-----QQHDAQELLAYLLDGMH 212
Query: 320 DELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
++L +++ E +G+N + ++A W +++S V D+F
Sbjct: 213 EDLNRVKSKPYIEDDDCDGSNDDVDAIA---AWSNYLRRDQSIVV-----------DLFQ 258
Query: 376 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
GQL+S + K S F+ L L + ++ T++D L LF E L G
Sbjct: 259 GQLRSRMTCSVCGKVSVKFDSFMYLSLPVTADC-RTLDDCLGLFCEEEYLSGDDAWYCPR 317
Query: 435 AGV-VTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLGRDLLVTPSA 492
V A K + + L ILI+HL RF + G +K+ + + +PL DL +
Sbjct: 318 CKCHVDAAKKMDLFMLPPILIVHLKRFEFSESGRRSKIERDISYPLSEW---DLSSSKKG 374
Query: 493 EGR---KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAI-----GTSKVL 543
EG Y+L A HH GHYTA A F+ +W F+D+S ++ G V
Sbjct: 375 EGGLRPVYDLYAAC-HHSGTAGGGHYTATAVNRFDGRWYRFNDSSCRSVDVDVDGDGMVR 433
Query: 544 HD---QAYVLFYKQV 555
+ AY LFY +V
Sbjct: 434 GEGRRTAYCLFYNRV 448
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 85 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 144
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG DI +P + S + +QEDA EFL F ++ MH
Sbjct: 145 SG-----------DIMKP--------------SQILTSAFHKYQQEDAHEFLMFTLETMH 179
Query: 320 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ L++ Q E TS ED S + DIFGG
Sbjct: 180 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 206
Query: 378 LKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
+S +K QG S T PFL + LDI S ++ AL E L G G
Sbjct: 207 WRSQIKCLLCQGT--SDTYDPFLDVPLDISS--AQSVNQALWDTEKSEELHGENAYYCGR 262
Query: 435 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+A
Sbjct: 263 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSQPTAG 319
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A + H G GHY + + +W DD VT + VL++ AYVLFY
Sbjct: 320 PLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYV 379
Query: 554 Q 554
Q
Sbjct: 380 Q 380
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|395745204|ref|XP_003780559.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12 [Pongo abelii]
Length = 362
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 154/370 (41%), Gaps = 60/370 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 31 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 82
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 83 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 131
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 132 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 175
Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAK 441
+ + ++ + + + L + + +I LR FS E L Y+ A
Sbjct: 176 RCLTCETISSTKMKIFIDLSVDVQQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 235
Query: 442 KSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG----R 495
K +K++ L IL LHL RF Y Q TKL V FPL+L L S + R
Sbjct: 236 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPDR 290
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH----------- 544
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 291 MYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKN 349
Query: 545 -DQAYVLFYK 553
+ Y+LFY+
Sbjct: 350 SESGYILFYQ 359
>gi|296486535|tpg|DAA28648.1| TPA: ubiquitin specific peptidase 46-like [Bos taurus]
Length = 382
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 176/414 (42%), Gaps = 83/414 (20%)
Query: 164 IDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSC 223
IDG NA+A I G ++ P INE GL+N GN C+ N+ LQAL C
Sbjct: 25 IDGEGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYFC 72
Query: 224 SPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMF 283
PF + + + + K T A D +++KK + V+ P F
Sbjct: 73 RPFRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVI------PPKKF 118
Query: 284 EAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING--ANTALVS 341
+ L+ N + Q+DA EFL+++++ + D +L+ + + NG N +
Sbjct: 119 ISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-ILQEEKKQEKQNGKLKNGNMNE 172
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLH 400
AE NK +T + +IF G L + + S+ + FL L
Sbjct: 173 PAE---------NNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLS 215
Query: 401 LDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
+D+ E +I LR FS E L + Y + + A+K ++++ L IL LHL
Sbjct: 216 VDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ--EAQKRMRVKKLPMILALHL 271
Query: 458 MRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG----RKYELVATVTHHGRDPS 511
RF Y Q TKL V FPL+L L S++ R Y+LVA V H G P+
Sbjct: 272 KRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDAVNLDRMYDLVAVVVHCGSGPN 326
Query: 512 KGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
+GHY + + WL FDD V I + + Y+LFY+
Sbjct: 327 RGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 379
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 145/355 (40%), Gaps = 55/355 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN CF+N+ LQ + P VQ L + + L V+ P+ G
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQHVAR-AYPNKG 184
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMHDE 321
+ + F PS +++LK + RP RQEDA EF+ +++D
Sbjct: 185 TKR---------ASAFKPSGIQSMLKVISSHF------RPYRQEDAHEFMRYLVDAWQKS 229
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS- 380
L+ KN +R S + IFGG L+
Sbjct: 230 CLQ---------------------------NHKNLDHPSRETS----VVHRIFGGYLRQQ 258
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG-VVT 439
++ + K S T Q L L +D ++ D+L+ F E L N +V
Sbjct: 259 ILCSVCKKPSNTYQALLDLSVDAKGS---SLADSLKHFVHAEKLTKQNKYRCENCKQLVD 315
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K + I IL +H RF++ S+K+ K + +P LG + P+ YEL
Sbjct: 316 ASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLG-PYMSDPNCSCW-YEL 373
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
+ + H G GHY + + N WL FDD V+ +VL+ QAY+L YK+
Sbjct: 374 IGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKR 428
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG DI +P + S + +QEDA EFL F ++ MH
Sbjct: 112 SG-----------DIMKP--------------SQILTSAFHKYQQEDAHEFLMFTLETMH 146
Query: 320 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+ L++ Q E TS ED S + DIFGG
Sbjct: 147 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 173
Query: 378 LKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
+S +K QG S T PFL + LDI S ++ AL E L G G
Sbjct: 174 WRSQIKCLLCQGT--SDTYDPFLDVPLDISS--AQSVNQALWDTEKSEELHGENAYYCGR 229
Query: 435 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+A
Sbjct: 230 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSQPTAG 286
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A + H G GHY + + +W DD VT + VL++ AYVLFY
Sbjct: 287 PLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYV 346
Query: 554 Q 554
Q
Sbjct: 347 Q 347
>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
isoform 2 [Sarcophilus harrisii]
Length = 371
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 145/357 (40%), Gaps = 49/357 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S +P V+ L + K TAF ++D
Sbjct: 43 GLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITALQKDSGEAATAFAYLMTDM----- 97
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F A + P + Q+DAQEFL ++++++H+
Sbjct: 98 ---------WLGDSDCVSPEVFRAAIGKIYPAFL-----KRTQQDAQEFLIYVLNELHEA 143
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
L K + + T NG +T + V S +TR +F GQL
Sbjct: 144 LKKYRRKKTQENGLSTKC--------YRKVASSESSIITR-----------LFEGQLNYD 184
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
+V + + + F +L L I SE ++++ L F + L ++ + +
Sbjct: 185 IVCLKCENCTYKNEVFTVLSLPIPSECECSLQECLGCFFQQDTLTW---NNQIHCAFCES 241
Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
K+ ++ K +I HL RF + KL + +PL + + + K
Sbjct: 242 KQDAAVRASIAKAPKTVIFHLKRFDCQGRVKRKLRTDIHYPLNNLDLSPYIYPLFRKHPK 301
Query: 497 YELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L V H G D GHYTA + N W FDD V I S V AY+LFY
Sbjct: 302 YSLCGVVNHFG-DLDGGHYTAFCKNTVNQTWYSFDDTRVCEIPDSAVQTAAAYLLFY 357
>gi|324503928|gb|ADY41696.1| Ubiquitin carboxyl-terminal hydrolase 8 [Ascaris suum]
Length = 939
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 161/365 (44%), Gaps = 42/365 (11%)
Query: 203 GLINSGNLCFLNATLQAL-----MSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
GL N GN CF+N+TLQAL + C + EL + + ++A F + D
Sbjct: 601 GLYNLGNTCFMNSTLQALFNTHSLRCVFTRRRFAELVNQRNKMGTFGVISA--AFSALMD 658
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
G+ P F L+ F +V S++ R RQ DAQEF +++D
Sbjct: 659 AVWSGAYSA-----------IRPLQF---LETFASEVNASLADR-RQHDAQEFQIYLLDA 703
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+H+++ ++ S T + E ++E +++ F S ++DIFG Q
Sbjct: 704 LHEDMNRVH-RPVSFEQNYTGMNLFEEGADYEA----------KSKMFSSSPVNDIFGCQ 752
Query: 378 LKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
S ++ +A S T + L +++ + TI D ++ P L+G +
Sbjct: 753 TVSQLQCGTCQAQSVTFEEVTQLSVELPTRGASTIIDCIKAHFKPVVLDGSCKWHCPKCK 812
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF---PLQLVLGRDLLVTPSA 492
+ A + +I L K+L++HL RFS+ G K + F PL + L+ A
Sbjct: 813 ALRVATRVTRIWKLPKVLVVHLKRFSFVVDGWEKNDALIHFDCLPLDVSSVVHPLIREKA 872
Query: 493 EGRK--YELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLHDQAYV 549
R + L A H GR S GHYT+ + +WL +DD SVT I + AY+
Sbjct: 873 SPRSECFNLYAVTNHSGRLNS-GHYTSVMHNEDTKEWLFYDDESVTPINADSICSKNAYI 931
Query: 550 LFYKQ 554
L++K+
Sbjct: 932 LYFKK 936
>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 156/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 50 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 101
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 102 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 149
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + P+ + +IF G L +
Sbjct: 150 LQEERKQEKQNGR---------------IPNGNIDNENNNSTPDPTWVHEIFQGTLTNET 194
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 195 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 252
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 253 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 307
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 308 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 366
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 367 NSESGYILFYQ 377
>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
Length = 374
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 160/371 (43%), Gaps = 59/371 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 138
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
LQ E + N LV + G K TQ + + +IF G L +
Sbjct: 139 -LLQEEKSQERQQNGKLVQNGGGGVGGSDGGKE------TQQ---TWVHEIFQGTLTNET 188
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 189 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 246
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 247 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 301
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 302 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 360
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 361 NSESGYILFYQ 371
>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
Length = 366
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + P+ + +IF G L +
Sbjct: 136 LQEERKQEKQNGR---------------LPNGNIDTENNHSTPDPTWVHEIFQGTLTNET 180
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 181 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 238
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 293
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P +GHY A + +D WL FDD V I +
Sbjct: 294 RMYDLVAVVVHCGSGPHRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 352
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 353 NSESGYILFYQ 363
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 143/358 (39%), Gaps = 59/358 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDTPS 260
G N GN CFLN+ LQ L+ +P V L + F V + D
Sbjct: 176 GFNNVGNTCFLNSALQVLVHTAPLVSALTGTHWHSERTCYLTGRSQFCLVCVMQDLINRC 235
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
G S+ P +P F LK RQED+ E L F++D M
Sbjct: 236 FGQSRS----------PLTPRGFTDNLKRIAKHFRLG-----RQEDSHELLRFVIDGM-- 278
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
++ E V P A T + + IFGG+L+S
Sbjct: 279 -----------------------QQHELAGVPPDALKARRDT-----TMIHRIFGGKLRS 310
Query: 381 -VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
V+ + AS T + FL L LDI + + + DALR F P++L G Y+ +
Sbjct: 311 RVLCNKCGHASDTFESFLDLSLDI--QGLDHLRDALRRFFQPDDLRGQNKYKCEACTR-- 366
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K IQ+ ++L LHL RF+ + K+ +S+ F L LGR +G +
Sbjct: 367 MVEATKQYTIQSPPQVLTLHLKRFTPLGK---KIGRSIGFDEDLNLGRHT-SEDHGKGLR 422
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L V H G P GHY A R W DD+ V+ AYVLFY +
Sbjct: 423 YRLYGIVHHAGGGPQSGHYIAHVRDSVGSWNRMDDSHVSPSERMPRQSSTAYVLFYAR 480
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 143/356 (40%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + TR + + L + SG
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 183 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 223
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + L + + T+ + IFGG L+S
Sbjct: 224 CL-------------SGCAKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSMCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKRKVP 310
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVMYGL 367
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+SV A VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHASNIKVVLNQQAYVLFYLRI 423
>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
jacchus]
gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
troglodytes]
gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
Length = 370
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 155/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 141 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|402591575|gb|EJW85504.1| ubiquitin carboxyl-terminal hydrolase [Wuchereria bancrofti]
Length = 430
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 170/396 (42%), Gaps = 69/396 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
GL+N GN C+ N+ +QAL C PF +Q Q+L+ + K LT + T
Sbjct: 38 GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLK-KSYDKESENLLTCLADLFHNIAT 96
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLS 312
+KK + + +P F LK + N+I Q+DA EFL+
Sbjct: 97 ------QKKRVGTI------APKRFITKLKKENGETINNIYIILGIFDNFSQQDAHEFLN 144
Query: 313 FIMDQMHDEL----------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
++++ + + L ++ + G+N V L + P NK +
Sbjct: 145 YLLNTISETLAEEKKAEKMEKMIRTNGMTKKGSN---VILPPYEPLTLCQPSNKIKLIWL 201
Query: 363 QSFLPSALSD------IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
L + SD IF G L + + S+ + FL L +D+ A +I L
Sbjct: 202 N--LSGSKSDATWIQEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCL 257
Query: 416 RLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHK 472
R+FS E L+G + N A+K ++I+ L ++L LHL RF Y Q + TKL
Sbjct: 258 RVFSDMETLQGEQKYYCENCCSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSY 317
Query: 473 SVRFPLQLVLGRDLLVTPSA--EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 530
V FPL+L L V+ A R Y+L A V H G P++GHY + N WL FD
Sbjct: 318 RVLFPLELRLFN---VSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHN-FWLLFD 373
Query: 531 DASVTAI---------GTSKV----LHDQAYVLFYK 553
D V I G S+ + AY+LFY+
Sbjct: 374 DDIVDKIDPMAIEDFFGLSECGVQKNSESAYILFYE 409
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 40 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 93
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 94 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 134
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 135 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 163
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 164 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 221
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 222 ATKRLTLHSTSQVLVLVLKRFTLVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 273
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 274 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 333
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 126 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 181
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+S+ + PF+P + L N ++ G RQEDA EF+ F +D+
Sbjct: 182 CHIQRASESMH--------PFAPKNILSHLPNIGGNL-----GFGRQEDAHEFMRFAIDK 228
Query: 318 MHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M L + GE + V P + + + IFGG
Sbjct: 229 MQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHIFGG 259
Query: 377 QLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G + G
Sbjct: 260 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKCDGC 318
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ V A+K + + IL + L RF G G KL+K V FP++L L + T ++
Sbjct: 319 SDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDGSD- 375
Query: 495 RKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+Y+L A V H + GHY + + +W DD V A+ +V AY+L Y
Sbjct: 376 -QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLY 434
Query: 553 KQ 554
+
Sbjct: 435 SR 436
>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
mulatta]
Length = 626
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 153/367 (41%), Gaps = 55/367 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 296 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLADLFHSIAT---- 349
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 350 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 396
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 397 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 440
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 441 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 498
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 499 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 557
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 546
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 558 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 616
Query: 547 AYVLFYK 553
Y+LFY+
Sbjct: 617 GYILFYQ 623
>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 142/356 (39%), Gaps = 62/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + AG+ L A V
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVR------- 160
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++++ N GR +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 161 -TARQAN------GRILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------KIFGGSLRSQ 238
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDNGAKVYQCERCKQK- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKAKKQLTVSKAPYVLTVHLKRFE--AHRSEKIDRKVDFTSAIDM-KPFVSGPHEGNLK 351
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407
>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
boliviensis boliviensis]
Length = 1319
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|297791015|ref|XP_002863392.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
gi|297309227|gb|EFH39651.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 135/352 (38%), Gaps = 51/352 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL NSGN CF+ + LQ P ++ L+ ++ G +
Sbjct: 143 GLYNSGNTCFIASVLQCFTHTVPLIESLRSYMYQNPCNCGNEKFCVMQALRDHIELALRS 202
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
S NI F L +F+ D + QEDA EFL +D++
Sbjct: 203 SGHGINID-----------RFRDNLTHFSSDFMIN-----HQEDAHEFLQSFLDKLERCC 246
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 381
L + E SI + +V ++FGG L S +
Sbjct: 247 LDPKNEPGSILSQDMNIVD------------------------------NVFGGGLMSTL 276
Query: 382 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 441
N S T +P L L+I E V + AL F+ E LE T V T +
Sbjct: 277 CCCNCNSVSNTFEPSLGWSLEI--EDVDNLWSALESFTRVEKLEDQLTCDNCKEKV-TKE 333
Query: 442 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 500
K +K L + HL RF K+ + V FPL+L L + + E KY L
Sbjct: 334 KQLKFDQLPPVATFHLKRFKNDGVTMEKIFEHVEFPLELDLLPFMSSNQNPEVSTKYHLY 393
Query: 501 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A V H G + GHY+ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 394 AFVEHIGIGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVLSRPAYILFY 445
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 200 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 255
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+S+ + PF+P + L N ++ G RQEDA EF+ F +D+
Sbjct: 256 CHIQRASESMH--------PFAPKNILSHLPNIGGNL-----GFGRQEDAHEFMRFAIDK 302
Query: 318 MHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M L + GE + V P + + + IFGG
Sbjct: 303 MQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHIFGG 333
Query: 377 QLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G + G
Sbjct: 334 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKCDGC 392
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ V A+K + + IL + L RF G G KL+K V FP++L L + T ++
Sbjct: 393 SDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDGSD- 449
Query: 495 RKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+Y+L A V H + GHY + + +W DD V A+ +V AY+L Y
Sbjct: 450 -QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLY 508
Query: 553 KQ 554
+
Sbjct: 509 SR 510
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 155/365 (42%), Gaps = 62/365 (16%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 210 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 265
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFI 314
+S+ + PF+P KN +PN I G RQEDA EF+ F
Sbjct: 266 CHIQRASESMH--------PFAP-------KNILSHLPN-IGGNLGFGRQEDAHEFMRFA 309
Query: 315 MDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
+D+M L + GE + V P + + + I
Sbjct: 310 IDKMQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHI 340
Query: 374 FGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSS 431
FGG+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G +
Sbjct: 341 FGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKC 399
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
G + V A+K + + IL + L RF G G KL+K V FP++L L + T
Sbjct: 400 DGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDG 457
Query: 492 AEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 549
++ +Y+L A V H + GHY + + +W DD V A+ +V AY+
Sbjct: 458 SD--QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYM 515
Query: 550 LFYKQ 554
L Y +
Sbjct: 516 LLYSR 520
>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 142/356 (39%), Gaps = 62/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + AG+ L A V
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVR------- 160
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++++ N GR +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 161 -TARQAN------GRILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------KIFGGSLRSQ 238
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDNGAKVYQCERCKQK- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V AKK + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKAKKQLTVSKAPYVLTVHLKRFE--AHRSEKIDRKVDFTSAIDM-KPFVSGPHEGNLK 351
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407
>gi|256084798|ref|XP_002578613.1| ubiquitin-specific peptidase 22 (C19 family) [Schistosoma mansoni]
Length = 489
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 72/368 (19%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
RGLIN GN CFLN +QAL +P +L++ D+ + PT
Sbjct: 172 RGLINMGNTCFLNVVIQALTH-TP---VLRDYLLADLHRCSSPT---------------- 211
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI-----------SGRPRQEDAQEF 310
+ +N ++ R + +++ V+ TP VPN++ +G Q DA EF
Sbjct: 212 ---RSRNCLACEMVR-ITQELYKPVV---TPFVPNNLLYAIWLHASHLAGY-EQRDAHEF 263
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
L ++ +H L+ GE E+ + S+ + +
Sbjct: 264 LITLLTLIHGHLV---GE--------------------ESPHDHDVSSSRESSDSCDCIV 300
Query: 371 SDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
+F G L+SV+ +G + S+TV PFL L LD+ +++ L + PE ++G
Sbjct: 301 HQVFFGDLESVISYEGCEHRSSTVDPFLDLSLDVIQRGSTSLQACLGSYFRPELIDGLIW 360
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG---RDL 486
S N G A K + L +L +L R TK++ S+ FP++L + +
Sbjct: 361 CSQCNIGR-PAVKQFSLLHLPNVLCFYLKR----CHHDTKINTSITFPVELDMAPYLHQI 415
Query: 487 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 546
+ SA KY L A + H G+ S GHYTA R W DD V ++ + VLH
Sbjct: 416 VGDQSAWYDKYSLYAVLNHSGQTNS-GHYTAYIRVGPTSWCLCDDQKVVSVNLNDVLHTD 474
Query: 547 AYVLFYKQ 554
AYVL Y +
Sbjct: 475 AYVLLYHK 482
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 161/374 (43%), Gaps = 65/374 (17%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
K+ P GL N GN C+LN+ LQ L P L+ +
Sbjct: 19 KNRPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSL-----------------C 61
Query: 257 DTPSGGSSKKKN-ISVLD--IGRPFS-------PSMFEAVLKNFTPDVPNSISGRPRQED 306
D+ S G K++ +L+ I R S P+ ++ LK F +QED
Sbjct: 62 DSVSNGERKRECPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFKGG-----QQED 116
Query: 307 AQEFLSFIMDQMHD---ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
A EFL +++D H+ L+KL+ + + N N + T +
Sbjct: 117 AHEFLRYVIDACHNTCLRLMKLRRKGINSNNKNY------------------DNDTTTST 158
Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
S S + +IFGG L+S VK + S V + + LD+ +++ +A++ F PE
Sbjct: 159 STSTSVVKEIFGGTLQSQVKCLSCHSESNKVDEIMDISLDVLHS--NSLREAMQKFFQPE 216
Query: 423 NLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
L+G YR S +V A+K + I IL++ L RF G G K+ K++ F
Sbjct: 217 ILDGNNKYRCESCKK--LVAARKQMSILQAPNILVIQLKRFE-GIFGG-KIDKAIAFEEV 272
Query: 480 LVLGRDLLVTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 538
LVL + S + R +Y L T+ H G P GHY A + +W +D+ VT
Sbjct: 273 LVLS-SFMCKGSQDPRPEYNLFGTIVHSGYSPESGHYYAYIKDATGRWYCCNDSYVTLST 331
Query: 539 TSKVLHDQAYVLFY 552
VL ++ Y+LF+
Sbjct: 332 MQDVLSEKVYILFF 345
>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
chinensis]
Length = 373
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 149/358 (41%), Gaps = 51/358 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCSEVATAFAYLMTDM----- 99
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P+ + Q+DAQEFL ++++++H E
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPEF-----MKKTQQDAQEFLIYVLNELH-E 144
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
LK S +T K + T S ++ +F GQL+
Sbjct: 145 ALKTYHRKRSYEKRSTQQCC-------------RKVIASET-----SIITQLFEGQLRYD 186
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL--EGYRTSSTGNAGVV 438
+V + + + + F +L L I S+ +++D L+ F + L S +
Sbjct: 187 IVCLKCDNCAHKNEVFSILSLPIPSDYECSLQDCLQCFFQQDTLTWNNQMHCSLCDTMQE 246
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEGR- 495
TA ++ I K++I HL RF KL + +PL DL + P A
Sbjct: 247 TAVRA-SISKAPKVVIFHLKRFDIQGMTKRKLRTDIHYPLT---NLDLTPYICPVARKHP 302
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY L A V H G D GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 303 KYSLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDSSVQTATAYLLFY 359
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 149/363 (41%), Gaps = 58/363 (15%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
++ P GLIN GN C+ NA LQ L P +Q L ++ K F +F
Sbjct: 554 EMRPCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACVKKER-------CFSCEF 606
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ K + + P SP + L+N + G R+EDA EFL + +D
Sbjct: 607 E--------KVILKAKEGKSPLSPIGILSQLQNIGSQL-----GNGREEDAHEFLRYAID 653
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK +N ++ E+E +G FGG
Sbjct: 654 AMQSVCLK----EARVNAVDSF------EEEATLIGL-------------------TFGG 684
Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
L+S +K + Q ++ L ++I + + +EDALR F+ E L+G G
Sbjct: 685 YLRSKIKCMKCHYKSEWQERMMDLTVEIEGD-IGKLEDALRRFTGTEILDGDNKYQCGRC 743
Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
AKK + I +L + L RF G G KL+KS+RFP L L + T S +
Sbjct: 744 RSYEKAKKKLTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLAPYMSGT-SDKS 800
Query: 495 RKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H GHY + ++W DD++VTA+ +VL AY+L Y
Sbjct: 801 PIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKGAYMLLY 860
Query: 553 KQV 555
+
Sbjct: 861 ARC 863
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 75 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 130
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+S+ + PF+P + L N ++ G RQEDA EF+ F +D+
Sbjct: 131 CHIQRASESMH--------PFAPKNILSHLPNIGGNL-----GFGRQEDAHEFMRFAIDK 177
Query: 318 MHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M L + GE + V P + + + IFGG
Sbjct: 178 MQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHIFGG 208
Query: 377 QLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G + G
Sbjct: 209 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKCDGC 267
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ V A+K + + IL + L RF G G KL+K V FP++L L + T ++
Sbjct: 268 SDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDGSD- 324
Query: 495 RKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+Y+L A V H + GHY + + +W DD V A+ +V AY+L Y
Sbjct: 325 -QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLY 383
Query: 553 KQ 554
+
Sbjct: 384 SR 385
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 211
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
leucogenys]
Length = 1315
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|256081222|ref|XP_002576871.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 1027
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 27/356 (7%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++N+ +Q+L V + G+ A V + G
Sbjct: 677 GLRNLGNTCYINSVVQSLSHTRALVHYFLD---------GFHERQAVVS-----NRLGYG 722
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS--GRPRQEDAQEFLSFIMDQMHD 320
K+ +L P+ +A L F V S Q+D+ EFL F++D +H+
Sbjct: 723 GEIVKHFEMLLSALYNQPNQ-DAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHE 781
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+L +++ N +T L E+ + + ++A + + F S + F G L+S
Sbjct: 782 DLNEVKK-----NNNSTKLKHNESMIEYTSSNEQAEAAWIQHKDFNNSIIVSSFQGLLRS 836
Query: 381 VVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVV 438
VK + S T F++L L I + D L+LF E + G R
Sbjct: 837 TVKCNSCHVTSTTFDVFMVLSLPIEQNKCQ-LTDCLKLFLEKEEMVGQCRWHCPSCNTRR 895
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K +++ L LI+HL RF Y K +V FP++ + +V P +Y
Sbjct: 896 DASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVDFPIECLDMSSFIVGPKLHSSEYA 955
Query: 499 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
L + + H G S GHYT R D +W +DD +V+ + +++ +D AY+LFY+
Sbjct: 956 LYSVLNHRGTMES-GHYTTFCRNIRDGRWYEYDDENVSLLDKNEIQNDNAYILFYE 1010
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 146/354 (41%), Gaps = 62/354 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++NA+LQ L P + + + PT G + T
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYM-------LSREHSPTCHRHKGCM--LCTMQAH 131
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
++ +I GR PS +A+ +F R +QEDA EFL F +D M
Sbjct: 132 ITRALHIP----GRVIQPS--QALAADF---------HRGKQEDAHEFLMFTVDAMKKAC 176
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L P +K ++ + + IFGG +S +
Sbjct: 177 L-----------------------------PGHKQVDHHSKD--TTLIHQIFGGYWRSQI 205
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTA 440
K + S T P+L + LDI +A +++ AL PE L G G A
Sbjct: 206 KCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPA 263
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELV 500
K++ + T +K+LIL L RFS +KL K+V +P L + + + + Y L
Sbjct: 264 SKTLTLHTSAKVLILVLKRFS--DVTGSKLAKNVHYPECLDM-QPYMSQQNTGPLVYVLY 320
Query: 501 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 321 AVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
Length = 364
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 164/380 (43%), Gaps = 59/380 (15%)
Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
DL P GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A +
Sbjct: 15 DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
+ S + KKK S+ +P F L+ + N + Q+DA EFL
Sbjct: 75 Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+F+++ +++ +L + S NG A G T + P+ +
Sbjct: 116 NFLINHINEIILAERNAGPS-NGNPKAT---------NQGGSTRNGTGTNGANSEPTWVH 165
Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
+IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 166 EIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKF 223
Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRD 485
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 224 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSD 283
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV--- 542
V P R Y+L A V H G P++GHY + + + WL FDD V I S +
Sbjct: 284 DAVNPD---RLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDF 339
Query: 543 ------LH---DQAYVLFYK 553
+H + Y+LFY+
Sbjct: 340 YGLTSDIHKSSETGYILFYQ 359
>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1350
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 161/371 (43%), Gaps = 64/371 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLA------DLFNSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG A E E KS +T + +IF G L +
Sbjct: 141 LEERKQEKQ-NGKLQNGTLEAPEPE--------KSDLT--------WVHEIFQGTLTNET 183
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 241
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 296
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 297 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 355
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 356 NSESGYILFYQ 366
>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
[Rattus norvegicus]
gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
norvegicus]
gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
norvegicus]
Length = 363
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 151/348 (43%), Gaps = 51/348 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + +++ P+ LT D
Sbjct: 36 GLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQ--PRKKESLLTCLA------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG L + + E P P+ + +IF G L +
Sbjct: 136 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 180
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 181 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 238
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 293
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 542
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 294 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAI 340
>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
Length = 1325
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 149/367 (40%), Gaps = 67/367 (18%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
+ P GL N GN CF N LQ L P V LL+ R+ + + L F +
Sbjct: 171 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 227
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ N S PFSP + L N ++ G RQEDA E + F +D
Sbjct: 228 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 270
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIFG 375
M L DE+ E V P T Q IFG
Sbjct: 271 MQSVCL----------------------DEFGGEKVVPPRAQETTLIQY--------IFG 300
Query: 376 GQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
G L+S V+ + S + + L ++I+ +AV ++E+ L F+A E L+G Y+
Sbjct: 301 GLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDR 359
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
+ V A K + I+ IL + L RF G G KL+K + FP LG ++
Sbjct: 360 CDD--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGP--YMSGG 413
Query: 492 AEGRK-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAY 548
EG Y+L A + H + GHY + F W DD+ V + VL +AY
Sbjct: 414 GEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAY 473
Query: 549 VLFYKQV 555
+L Y +V
Sbjct: 474 MLLYSRV 480
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 162/392 (41%), Gaps = 76/392 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 256
GL N GN C++N+T+Q L + PF + + R + P T AF + D
Sbjct: 845 GLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPMGTKGVLALAFANILRDM 904
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
GG+ SP F + + P S Q D+QEFLSF++D
Sbjct: 905 WQGEGGT--------------LSPVTFRRSICSHAPQFSGS-----EQHDSQEFLSFLLD 945
Query: 317 QMHDELLKL----QGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+H++L ++ EST A + +A E EW+ ++ S +
Sbjct: 946 GLHEDLNRILQKRNIESTPEREAELEKLPTQIASEQEWQIYRMRDDSLIV---------- 995
Query: 371 SDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEGY 427
D F GQ ++ ++ +K S T F+ L L I + T++ + F E +E
Sbjct: 996 -DFFQGQYRNRMECLTCHKTSTTYNTFMYLTLPIPTGRASKVTLQHCIDAFVKEEVMEKS 1054
Query: 428 RTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
+ + + A K + + L +L++HL RFS + K+ V FPL+ G DL
Sbjct: 1055 DAWNCPHCKALRKATKQLSLSRLPPVLLIHLKRFSAKGPFTDKIETFVEFPLK---GLDL 1111
Query: 487 L------VTPSAEG---------------RKYELVATVTHHGRDPSKGHYTADARYFNDQ 525
+ P A G +Y+L A H G S GHYTA + +
Sbjct: 1112 TNYMPPPLPPGAIGVPPLSPDDPRCQLPPYRYDLYAVTNHFGTL-STGHYTA---FIASR 1167
Query: 526 --WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
WL+ DD+ VT V+ AY+LFYK+
Sbjct: 1168 GGWLYCDDSRVTPADAKDVVGKPAYILFYKRT 1199
>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1333
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
Length = 1325
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 143/356 (40%), Gaps = 65/356 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++NATLQ L P + L+ G T
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYM---------------LSQQHGTTCRRQTSCML 125
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ + +++ + +L F R +QEDA E+L FI+D M
Sbjct: 126 CTLQAHLTRVLCHPGRVLRPLPLLLAAFH---------RHKQEDAHEYLMFILDAMQQ-- 174
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L E+ + P++ + + + +FGG +S +
Sbjct: 175 -----------------ACLPEDKLSDPECPQDSTLIQQ-----------LFGGYWRSQI 206
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 438
+ S+T++P+L + LDI A H+I AL PE LEG Y S V
Sbjct: 207 QCLHCQGISSTLEPYLDISLDI--GAAHSISQALEQLMKPELLEGENAYHCSKCLEK--V 262
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K + + T K+LIL L RFS K+ K V++P +L + + L A Y
Sbjct: 263 PASKVLTLHTSPKVLILVLRRFS--DLTGNKMTKEVQYPERLDM-QHYLSEQRAGPLVYV 319
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H GR GHY + N QW DDA V+A + L AYVLFY Q
Sbjct: 320 LYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 64/357 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N+GN CF+N+ LQ L P ++LL ++D K+ +T + + + S
Sbjct: 17 GLFNTGNTCFMNSALQCLFHTPPLLRLLSA-HSKDTCKSSGFCMTCCMKYTAMRSQSSNK 75
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
S+ F+P LK F + RQED+ EFL ++ +
Sbjct: 76 SA-------------FNPDGITRNLKAFAKSLRYG-----RQEDSHEFLRHAIEGLQRSC 117
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L Q + A T+ V +FGGQL+S V
Sbjct: 118 LAGQPQKVDPKLAETSWVH------------------------------QLFGGQLRSRV 147
Query: 383 KAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 438
+G S T L L LDI+ + +++DAL+ F AP+ L+G Y+ V
Sbjct: 148 HCKGCGHNSDTYDSILDLSLDIHRTS--SLKDALKSFVAPDYLKGSDKYKCDHCKK--YV 203
Query: 439 TAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
A+K I +L +HL RFS +GS+ + LH L+ + + + G +Y
Sbjct: 204 NAEKRFTINKAPLVLTIHLKRFSPFGSKLTNLLHYDEHITLKPYM------SEGSFGPRY 257
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L + H G P+ GHY + + +W +D SVT + AY+L Y Q
Sbjct: 258 SLYGVICHSGSGPNSGHYFSFVKSKQGRWYEMNDESVTPCSKPYPMLKTAYMLMYIQ 314
>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
Full=Deubiquitinating enzyme 12-B; AltName:
Full=Ubiquitin thioesterase 12-B; AltName:
Full=Ubiquitin-specific-processing protease 12-B
Length = 370
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 156/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLS------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 152/363 (41%), Gaps = 65/363 (17%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDT 258
P GL+N GN CF N LQ L P V L E G+ T F+ +F +
Sbjct: 180 PCGLLNCGNSCFANVVLQCLTYTRPLVAYLLE--------KGHQTECKHNDWCFLCEFQS 231
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+S+ PFSP + L+N ++ G RQEDA EF+ F +D M
Sbjct: 232 HVERASQS--------ALPFSPMNILSRLRNIGGNL-----GYGRQEDAHEFMRFAIDTM 278
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
V L E + V P ++ + + IFGG+L
Sbjct: 279 QS-------------------VCLDEFGGEKAVEPASQET---------TIIQHIFGGRL 310
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST-GNAG 436
+S V+ + NK S + + L ++I+ +A ++E+ L F+ E L G G
Sbjct: 311 QSQVICTKCNKISNQFENMMDLTVEIHGDA-ESLEECLNQFTDKEWLHGENMYKCDGCND 369
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V A K + IQ +L + L RF G G KL+K V FP L DL S +G
Sbjct: 370 YVKAWKRLTIQRAPNVLTIALKRFQSGRFG--KLNKRVTFPETL----DLSPYMSEKGDG 423
Query: 497 ---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y+L A V H + GHY + F+ W DD+ V+++ +VL AY+L
Sbjct: 424 ADVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDSKVSSVELDEVLSQGAYMLL 483
Query: 552 YKQ 554
Y +
Sbjct: 484 YSR 486
>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
Length = 1202
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
Length = 354
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 156/371 (42%), Gaps = 64/371 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + +++ P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQ--PRKKENLLTCLA------DLFHSI 76
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + D P P+ + +IF G L +
Sbjct: 125 LQEERKQEKQNGR----LPNGNIDNENNSPPD------------PTWVHEIFQGTLTNET 168
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 169 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 281
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 282 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 340
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 341 NSESGYILFYQ 351
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
mulatta]
Length = 1317
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
mutus]
Length = 1304
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
Length = 376
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 156/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 46 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLS------DLFHSI 97
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 98 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 145
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + P+ + +IF G L +
Sbjct: 146 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 190
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 191 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 303
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 304 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 362
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 363 NSESGYILFYQ 373
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 142/356 (39%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + R+ + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSQEHARNCHQGGFCMLCVMQNHIIQAFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 183 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 223
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L N A Q+ + + IFGG L+S
Sbjct: 224 CL-------------------------------NGCAKLDRQTQATTLVHQIFGGYLRSR 252
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSLCKSVSDTYDPYLDIALEIRQAA--NIVRALELFVKPDVLSGENAYLCAKCKKKVP 310
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 311 ASKRFSIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVTYGL 367
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1324
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
Length = 1234
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
africana]
Length = 1431
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQHTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1324
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
familiaris]
Length = 370
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 157/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + ++ WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HEFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
troglodytes]
gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|156370210|ref|XP_001628364.1| predicted protein [Nematostella vectensis]
gi|156215339|gb|EDO36301.1| predicted protein [Nematostella vectensis]
Length = 409
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 152/361 (42%), Gaps = 60/361 (16%)
Query: 206 NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSK 265
N GN C++N+ LQ L + +P RD P T+ G DF +
Sbjct: 84 NLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDDINKENPLGTS--GMYLDFYFITS---- 137
Query: 266 KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK- 324
N S P + FE V Q+D QEFL+ +MD++H+++ +
Sbjct: 138 -INFSFYLTSSPEFFTTFEGVC----------------QQDFQEFLALMMDKLHEDVCQI 180
Query: 325 -----LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L+ +I+ A A ++ W+ +N+S + ++F G K
Sbjct: 181 RHKPYLKAPDDNIDPAEAANIT------WDNHRKRNESLML-----------NLFDGMFK 223
Query: 380 SVVKAQ-GNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEG---YRTSSTGN 434
S V+ K S T + F L L + + H ++ D ++LF+ E + G +
Sbjct: 224 STVRCLVCAKDSVTYETFSNLTLPLPGNSNHCSLRDCIKLFTRAERMSGDDMWYCPRCKQ 283
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSA 492
V A K ++I L ILI+HL RF Y KL +V FP+ G D+ +T
Sbjct: 284 HRV--ASKQLQIWRLPPILIVHLKRFQYDGMWRQKLQTAVSFPVD---GLDMSGYITGPT 338
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
+ Y L H+G GHYTA + N +W FDD VT + + ++ AY+LF
Sbjct: 339 KRPAYHLYGVSNHYGTM-HGGHYTAFCKNAHNQRWFKFDDQVVTEMSANDIVSSAAYLLF 397
Query: 552 Y 552
Y
Sbjct: 398 Y 398
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTALMEEF----- 109
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S + L L +++ K + + S + D+F GQL
Sbjct: 161 HNEVNRVTVRPKS---SPEGLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENI 327
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 328 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 386
Query: 552 YK 553
Y+
Sbjct: 387 YE 388
>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
Full=Deubiquitinating enzyme 12-A; AltName:
Full=Ubiquitin thioesterase 12-A; AltName:
Full=Ubiquitin-specific-processing protease 12-A
gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
Length = 370
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 156/371 (42%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLS------DLFHSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG + N + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNSAPDPTWVHEIFQGTLTNET 184
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 297
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 357 NSESGYILFYQ 367
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 210
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFY 408
>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 1129
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 164/399 (41%), Gaps = 69/399 (17%)
Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKDLLPR---GLINSGNLCFLNATLQALMSCSPFV 227
AA I + P KA++ + V + R GL N GN C++N+T+Q
Sbjct: 775 AAKPQPRIDQPQPKPRKAVHRELNPVYGNVGRALTGLRNLGNTCYMNSTIQE-------S 827
Query: 228 QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIG--RPFSPSMFEA 285
QL GY + DF I L G + +P F+
Sbjct: 828 QL------------GY-----YGEIADDFSV---------IIRALWSGQYKCITPRDFKY 861
Query: 286 VLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTAL-VSLAE 344
V+ PD + Q+D+ +FL+F+MD +H+ L +++ N + S A
Sbjct: 862 VVGKHNPDFAGTT-----QQDSHDFLTFLMDGLHEGLNRVKKRPEIPEQDNDKMGDSQAA 916
Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDI 403
E W+ N+S + ++F GQLKS + K S Q F+ L L I
Sbjct: 917 ELAWKHHQLCNESIIV-----------ELFQGQLKSTLMCLHCQKMSVNFQAFMFLTLPI 965
Query: 404 YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSY 462
+ ++ + L+LF E L G V A K + I L +IL++ L RF Y
Sbjct: 966 PPSSRCSLGECLKLFLKEERLTGSSRWRCPRCKVDRDAVKKIDIWRLPRILLIGLNRFVY 1025
Query: 463 GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTA 517
Q K++ V FP R+L + P EG K Y L AT H G GHYTA
Sbjct: 1026 KGQWREKINSFVDFP-----TRNLDLNPYLEGPKSIKSSYRLYATSNHSG-TLDGGHYTA 1079
Query: 518 DARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
R ++W +DD V+ + S V AYVL+Y V
Sbjct: 1080 YCRNPCTEKWFKYDDDHVSEMKESDVRSSLAYVLYYTSV 1118
>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
Length = 1316
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
Length = 1324
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 208
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 209 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFY 408
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 32/262 (12%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
Q+DAQEFL F++D +H+E+ ++ S G L +E++ + + K V R
Sbjct: 419 QQDAQEFLRFLLDGLHNEVNRV---SVRPRGTAEDFDHLQDEEKGKKMWSK---YVERED 472
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLF 418
S + D+F GQLKS + +TV PF L L I Y E ++ D +RLF
Sbjct: 473 S----KIVDLFVGQLKSSLTCSHCGFCSTVFDPFWDLSLPISKKSYGEV--SLMDCMRLF 526
Query: 419 SAPENLEG------YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
+ + L+G YR + K +IQ KIL+LHL RFS + S KL
Sbjct: 527 TKEDVLDGDEKPTCYRCKARRRC-----TKKFRIQKFPKILVLHLKRFSEARRTS-KLST 580
Query: 473 SVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 531
V FPL+ + R+ + ++ Y L A H G GHYTA R N +W F+D
Sbjct: 581 FVNFPLKDLDLREF-ASGNSTNAMYNLYAVSNHSG-TTMGGHYTAYCRNPNSGEWYTFND 638
Query: 532 ASVTAIGTSKVLHDQAYVLFYK 553
+ VT + +S+V AYVLFY+
Sbjct: 639 SRVTPMSSSQVRSSDAYVLFYE 660
>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 153/356 (42%), Gaps = 33/356 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L +MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLSLMDGLH 843
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
++L N A+ E +E ++ + + + S + +F GQ K
Sbjct: 844 EDL----------NKADNRKRHKEENNEHLDEPAGGRARLQKHKQLNESIIRLLFQGQFK 893
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
+ V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 894 ATVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRAR 953
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY
Sbjct: 954 RDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKY 1013
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1014 NLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
Length = 1067
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
GL N GN C++N+ LQ L + + DI +A + G V++ F
Sbjct: 736 GLRNLGNTCYMNSILQCLCNTVAMADYFNRNYYQDDINRAN---ILGHKGEVAEEFSV-- 790
Query: 261 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
+ L +G + SP F+ + NS +D+QE L F+MD +
Sbjct: 791 -------VMKALWLGQYKMISPLDFKGTICKI-----NSRFSSYEHQDSQELLLFLMDGL 838
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H++L N A+ EE E A ++ + S + +F GQ
Sbjct: 839 HEDL----------NKADKRRGYKEEEIEHLDDVSAADLAWSKHKQLNESIIVALFQGQF 888
Query: 379 KSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
KS V+ + S T + F+ L L++ + + +++D L+LF E L +G R
Sbjct: 889 KSTVQCMSCQHKSRTFETFMYLTLEMTASSKCSLQDCLKLFHKEERLTDGNRFYCRHCKT 948
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
A K ++I L IL++HL RF Y + KL V FPL + ++ P +K
Sbjct: 949 HRDAIKRMQIWKLPPILLVHLKRFKYEGRWREKLQTLVDFPLDNLDLSQYVIGPKNNLKK 1008
Query: 497 YELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A H+G GHYTA + +W FDD V+ I +S V AY+ FY
Sbjct: 1009 YNLYAVSNHYG-GMDGGHYTAYCKNPMKQRWFKFDDHEVSEISSSTVRSPAAYIFFY 1064
>gi|387019611|gb|AFJ51923.1| Ubiquitin carboxyl-terminal hydrolase 46-like [Crotalus adamanteus]
Length = 366
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + + V+ AEE+ + + + + +IF G L +
Sbjct: 137 QEEKKQEKQNGKLKNGNVNEAEENSKQEL----------------TWVHEIFQGTLTNET 180
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S E
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGEAIN 291
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 350
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 351 SKNSESGYILFYQ 363
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 179/427 (41%), Gaps = 96/427 (22%)
Query: 167 RDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPR---------GLINSGNLCFLNATL 217
R + A ++S +G+ + A +P+ + + ++PR GL N GN C++N+ +
Sbjct: 83 RTNDNADASASTAGTSLRTVSAPTQPLYTPR-IIPRFPRAHMRAAGLHNRGNTCYMNSVM 141
Query: 218 QALMSCSPFVQLLQE------LRTRDIPKAGYPTLTAFVGF-----VSDF--DTPSGGSS 264
Q+L+ P L L +P+ + A F + DF SG S+
Sbjct: 142 QSLLHTPPLATALLTQSAPTLLGRYGVPRTQKQAVKAANSFNALTEMKDFFAHAYSGASA 201
Query: 265 KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMHDELL 323
SP+ F + L+ F + RP RQEDA E+L +++
Sbjct: 202 -------------VSPTAFVSNLRKFARPL------RPGRQEDAHEYLRLLLE------- 235
Query: 324 KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK 383
LQ T G + + P + T + + IFGG+L+S V
Sbjct: 236 ALQQACTCFAGKD--------------IKPNDPILST-------TLIQRIFGGRLRSRVT 274
Query: 384 AQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAK 441
+ S T P L L LD+ + +HT++ AL F+A E L + Y+ V A
Sbjct: 275 CYSCRHNSDTYDPMLDLSLDV-RKGIHTVKQALDAFTAAEALADKYQCDHCQRR--VEAT 331
Query: 442 KSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGR-----------DLLVT 489
K I +L +HL RF +G+ K++K + + +L LGR D+
Sbjct: 332 KRFSIDQAPMVLTVHLKRFGIFGN----KINKPISYSDRLHLGRYMSERDKGLGADVEDE 387
Query: 490 PS----AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
P ++Y L A V H+G P+ GHY A R + QWL DD+ V+ + +
Sbjct: 388 PDLGTLGAAQQYRLFAIVHHYGSGPNVGHYVASVRSADGQWLRMDDSFVSKLPQCPLDDP 447
Query: 546 QAYVLFY 552
AY+LFY
Sbjct: 448 SAYLLFY 454
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 118 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 171
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 172 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 212
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 213 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 241
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 242 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 299
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 300 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 351
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 352 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 411
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 149/357 (41%), Gaps = 65/357 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAFVGFVSDFDTPS 260
GL N GN CFLN+ LQ L+ P + + RD P G+ +F D
Sbjct: 109 GLYNQGNTCFLNSALQCLLHTPPLLHAVLN-HPRDCPAQDDGFCITCSFRRVAQD----- 162
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
S K K G FSPS +L N + S+ R RQEDA EFL F++D M
Sbjct: 163 --SFKVK-------GNAFSPS---PILHNLH-KIAKSLR-RGRQEDAHEFLRFLIDAMQK 208
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L G+ ++ A E W +S +FGG+L+S
Sbjct: 209 ACL--HGQPKKVDPA-------VAEATW---------------------VSRVFGGKLRS 238
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
V+ N S T L L LDI + + ++ AL+ F A ++L G Y+
Sbjct: 239 RVRCCSCNHPSDTFDSILDLSLDIQNAS--SVHQALKHFVAIDHLRGADKYKCEKCKKP- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
V A+K I + L +HL RF+ +G KL V++ L L + +
Sbjct: 296 -VNAEKQFTIDSAPLALTVHLKRFTPFGR----KLAHVVQYKEHLSLAGAMSKDAKEQSP 350
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+Y+L + H G P+ GHY A + N +W +D +V+ + AY+LFY
Sbjct: 351 QYKLYGVICHAGSGPNSGHYYAFTKGPNGRWYEMNDDAVSLQTRPPLDLKSAYMLFY 407
>gi|71654677|ref|XP_815953.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70881048|gb|EAN94102.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 438
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 172/379 (45%), Gaps = 48/379 (12%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
RG++N+ N CF+NAT QAL+ PF QL + + PTL ++ +
Sbjct: 80 RGILNNSNYCFMNATAQALVFLPPFAQLAI---SAVVEAELCPTLATLGKWMLSY----- 131
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFIMDQM 318
++ N V + P +AV S G+ QEDA EF+ +++ +
Sbjct: 132 -WARAPNQLVPPLSLP------KAVRGQTASSAAPSNWGKMDGSSQEDATEFMHHLLEVI 184
Query: 319 HDELLKLQGESTS-----INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD- 372
EL L+G + I NT+L +E+ W V + + +V S L D
Sbjct: 185 QTELCALEGSYSESPTGRIRDPNTSLEGNSEKKGWTFVKGRERLSVREHCDKSRSVLLDA 244
Query: 373 IFGGQLKSVVKAQG---NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
+FGG +++ +K + + AS V+ F LL +D+ A ++E AL +L+ R
Sbjct: 245 VFGGAVENHLKGKSKLKDHASVLVEGFFLLQVDVGFSAECSLEMALE-----RSLQRERV 299
Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLV 488
+ A + K++K++ L +L+L L R++ ++G KL VRF LVL +
Sbjct: 300 YDSARAKDLL--KTMKLRRLPTVLLLQLQRWAVTAEGELVKLDNLVRFSKTLVLPKSTCS 357
Query: 489 --TPSAEGRKYELVATVTHHGRDPSKGHYTAD---------ARYFNDQWLHF-DDASVTA 536
T S R YELVA + H G+ +GHY A A D L F +DA V
Sbjct: 358 DNTVSNAARTYELVAFIAHRGKATERGHYVAYLANASLPTLATSQGDAALTFCNDAKVHT 417
Query: 537 IGTSKVLHDQA-YVLFYKQ 554
+ + + +A Y+L Y++
Sbjct: 418 VTMREAIEGEAVYLLVYQR 436
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 28 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 81
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 82 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 122
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 123 CLSASQPSGH-----------ASEDT--------------------TIIRQIFGGTWRSQ 151
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 152 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 209
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 210 ATKRLALHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 261
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 262 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 321
>gi|357485235|ref|XP_003612905.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514240|gb|AES95863.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 739
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 152/389 (39%), Gaps = 89/389 (22%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGF 252
K+V ++ GL N GN CFLN+ +Q P V+ LL + + G+ + AF
Sbjct: 146 KAVPLMIGAGLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCHSPNDGHNGFCVICAF--- 202
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+ S+ GR SP +F LK F+ D R +QEDA EF+
Sbjct: 203 -----------RYQMKQSLESTGRVISPVVFVDNLKQFSSDF-----RRHQQEDAHEFMQ 246
Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
+D++ S EED +
Sbjct: 247 CALDKLE------------------TCFSNFEED---------------------NIAKK 267
Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
+FGG L S ++ +++S T + + L L+I E V +I AL F+ EN++
Sbjct: 268 VFGGSLVSKLRCCNCSRSSITNEQLIDLSLEI--ENVDSISSALESFTMVENIDAKLKCE 325
Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
N V K+ + QT S I HL RF + G+ K+ K + FPL+L L ++
Sbjct: 326 GCNEEVSVEKQLMLDQTPS-IAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPYTILNE 384
Query: 491 SAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA----------------- 532
S KY+L A V H+G GHY R D W DD+
Sbjct: 385 SDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVASAILVPLGRDLIVL 444
Query: 533 -------SVTAIGTSKVLHDQAYVLFYKQ 554
VT + VL +AY+LFY +
Sbjct: 445 QITCLMIKVTKVSEGTVLSQEAYILFYAR 473
>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
Length = 364
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 167/380 (43%), Gaps = 59/380 (15%)
Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
DL P GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A +
Sbjct: 15 DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
+ S + KKK S+ +P F L+ + N + Q+DA EFL
Sbjct: 75 Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+F+++ +++ +L + S ++ + + T G ++ P+ +
Sbjct: 116 NFLINHINEIILAERNAGPSNGNPKSSSQGGSTRNGTGTNGANSE----------PTWVH 165
Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
+IF G L S + S+ + F L +D+ + +I LR FS E L
Sbjct: 166 EIFQGILTSETRCLNCETVSSKDENFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKF 223
Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRD 485
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 224 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSD 283
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV--- 542
V P R Y+L A V H G P++GHY + + + WL FDD V I S +
Sbjct: 284 DAVNPD---RLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDF 339
Query: 543 ------LH---DQAYVLFYK 553
+H + Y+LFY+
Sbjct: 340 YGLTSDIHKSSETGYILFYQ 359
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 170
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 208
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ +NG+N L + T+ + IFGG L+S
Sbjct: 209 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 239
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 408
>gi|194209163|ref|XP_001917117.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Equus
caballus]
Length = 360
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 175/411 (42%), Gaps = 79/411 (19%)
Query: 165 DGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCS 224
D R NA+A I G ++ P INE GL+N GN C+ N+ LQAL C
Sbjct: 4 DKRGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYFCR 51
Query: 225 PFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE 284
PF + + + + K T A D +++KK + V+ P F
Sbjct: 52 PFRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVI------PPKKFI 97
Query: 285 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE 344
+ L+ N + Q+DA EFL+++++ + D +L+ + + NG L
Sbjct: 98 SRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-ILQEEKKQEKQNG------KLKN 145
Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDI 403
+ ET NK +T + +IF G L + + S+ + FL L +D+
Sbjct: 146 GNMNET-AENNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV 196
Query: 404 YSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
E +I LR FS E L + Y + + A+K ++++ L IL LHL RF
Sbjct: 197 --EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ--EAQKRMRVKKLPMILALHLKRF 252
Query: 461 SYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG----RKYELVATVTHHGRDPSKGH 514
Y Q TKL V FPL+L L S++ R Y+LVA V H G P++GH
Sbjct: 253 KYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGH 307
Query: 515 YTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 553
Y + + WL FDD V I + + Y+LFY+
Sbjct: 308 YITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 357
>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
guttata]
Length = 366
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 159/373 (42%), Gaps = 67/373 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 136
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + + ++ AEE+ NK +T + +IF G L +
Sbjct: 137 QEEKKQEKQNGKLKNGNMNEAEEN--------NKQELT--------WVHEIFQGTLTNET 180
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVN 291
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 350
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 351 SKNSESGYILFYQ 363
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P E +L F R ++EDA EFL F ++ +
Sbjct: 147 --------ALLHAGEVIRPR--EDLLAGFH---------RHQKEDAHEFLMFTLNAVQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLSVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTLVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 162/377 (42%), Gaps = 68/377 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+NA LQ+L + + F ++L P + G + +
Sbjct: 146 GLRNLGNTCFMNAVLQSLSNINQFCGYFKDL----------PAVELRSGKTAGKRIYNTR 195
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR--PR-----QEDAQEFLSFIM 315
+ K ++S+++ R ++++ +PD ++ + PR Q+DA EF+ +++
Sbjct: 196 NMKHDDVSLVEEIRKTLCALWQGDQTAISPDSLFTVMWKIFPRFRGYQQQDAHEFMRYLL 255
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D++H E LQG + W T PK ++ T +S IFG
Sbjct: 256 DRLHTE---LQGST------------------WPTT-PKKQTNGHAT------IVSVIFG 287
Query: 376 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE-----------AVHTIEDALRLFSAPEN 423
G L S V + + PFL + LDI V ++D ++ F A E
Sbjct: 288 GLLLSEVTCRPCGSLYKKIDPFLDVSLDIPERFRPRSKNKDGSQVCRLQDCMQSFIAVEE 347
Query: 424 L---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
L E Y T K +K + +L +HL RF++ TK+ V+FP++
Sbjct: 348 LEETEQYMCPKCQQRQPSTKKFWLK--AIPNVLCIHLKRFTWSGFLRTKIDTYVQFPMKG 405
Query: 481 VLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 535
+ + ++ P + Y+L A + H G GHY A A N QW F+D++VT
Sbjct: 406 LDIQPFMLGPECQDENVSTTVYDLAAVIVHQGSGAGAGHYIAFA-VNNGQWYCFNDSTVT 464
Query: 536 AIGTSKVLHDQAYVLFY 552
+ + +AY+LFY
Sbjct: 465 PVEEKVITRCKAYILFY 481
>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
Length = 369
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 164/373 (43%), Gaps = 68/373 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T + D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQARKKETLLTCLS--------DLFNSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKRFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N ++ E DE E K+ +T + +IF G L +
Sbjct: 140 LQEEKKQEKQNGKLQNGSI----ESDEGE------KAELT--------WVHEIFQGALTN 181
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
+ +A S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 182 ETRCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQ 239
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 240 EAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATN 294
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 295 PDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 353
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 354 SKNSESGYILFYQ 366
>gi|312376797|gb|EFR23784.1| hypothetical protein AND_12248 [Anopheles darlingi]
Length = 379
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 171/374 (45%), Gaps = 47/374 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + ++ + TL + + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--RRTKETLLSCLA-----DLFYSI 77
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + + +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 78 ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWE--TVG---PKNKSAVTRTQSFLPSALSDIFGGQ 377
L + ++ + G ++ S + ++G P++ S + P+ + +IF G
Sbjct: 127 LAERNQAKAAGGKGSSSSSSGNGTAGQNGSLGPGTPQDGSGGVAGNNTEPTWVHEIFQGI 186
Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-A 435
L S + S+ + F L +D+ + +I LR FS E L N
Sbjct: 187 LTSETRCLNCETVSSKDENFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDNCC 244
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPS 491
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P
Sbjct: 245 SYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD 304
Query: 492 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 544
R Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 305 ---RLYDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDFYGLTSD 360
Query: 545 -----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 361 IQKSSETGYILFYQ 374
>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Cricetulus griseus]
Length = 1285
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQTHITQALSNPG 170
Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 210
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L NG+N L + T+ + IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFY 408
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 141/355 (39%), Gaps = 68/355 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+NA LQ L P +L T+ G+ + + + G
Sbjct: 98 GLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTCHAGGFCVMCIMQAHIIQALSHPG 157
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K I+V+ F QEDA EFL + +D M
Sbjct: 158 DAIKP--IAVITSHFRFG-----------------------NQEDAHEFLQYTLDAMQKA 192
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L+ E A T + IFGG L+S
Sbjct: 193 CLQGSYELDRHTQATTLIY-------------------------------QIFGGYLRSR 221
Query: 382 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
VK + S T +L + L+I + V ++ +AL F PE LEG Y+ S + +
Sbjct: 222 VKCLNCRGVSDTFDLYLDVTLEI--QDVRSVNEALAQFVKPEQLEGENCYKCSKCNS--M 277
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
V A KS+ I S +L L L FS GS K+ K V++P L + R + PS E +Y
Sbjct: 278 VPASKSLSIHRPSNVLTLTLKGFS-NCTGS-KIAKIVKYPEHLNI-RAYMSQPSGEAMQY 334
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G GHY + + N W +D V+ S VL QAY+LFY
Sbjct: 335 SLYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSVLSQQAYILFY 389
>gi|449680173|ref|XP_002165294.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12A-like [Hydra
magnipapillata]
Length = 396
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + + K LT D +
Sbjct: 47 GLVNFGNTCYCNSVLQALYFCQPFRE--KVLSYKPLNKRKENLLTCLS------DLFNSI 98
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++K+ V+ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 99 ATQKRKTGVI------APKRFVARLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 146
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + +L S++ + + S T + P+ + D+F G L +
Sbjct: 147 LQGEKLKEKEKEKLGSLSSVSSKASGSSGYSTTTSQFTLKEPPEPTWVHDLFEGTLTNET 206
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
+ + S+ + FL + +D+ E +I L+ FS E L + Y G+
Sbjct: 207 RCLCCETLSSKDESFLDISVDV--EQNTSISYCLKNFSFTETLCSEQKYFCEVCGSKQ-- 262
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
A+K + ++ L +IL LHL RF Y Q TKL V FPLQL L + L + R
Sbjct: 263 EAQKRMMVKKLPQILALHLKRFKYVEQQQRFTKLSHRVTFPLQLRLF-NTLENATHRDRL 321
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+L A V H G P++GHY A + N WL FDD V I T +
Sbjct: 322 YDLSAIVVHCGTGPNRGHYIAIVKSHNI-WLLFDDDIVDKIETRSIEDFFGLTTDVQKNS 380
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 381 ECGYILFYE 389
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 152/362 (41%), Gaps = 58/362 (16%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDF 256
++ P GLIN GN C+ NA LQ L P +Q L ++ L F +F
Sbjct: 17 EMRPCGLINCGNSCYANAVLQCLAFTPPLTSFFVQGLHSKS-------CLNRECCFSCEF 69
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
++ + + K+ P SP + L+N + N R+EDA EFL + +D
Sbjct: 70 ESIILKAKEGKS--------PLSPLGILSQLQNIGSQLGNG-----REEDAHEFLRYAID 116
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK G +N A+ S AEE + + FGG
Sbjct: 117 AMQSVCLKEAG----VN----AMDSFAEE---------------------TTLIGLTFGG 147
Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
L S +K + Q ++ L ++I + +EDALR F++ E L+G G
Sbjct: 148 YLHSKIKCMKCHYKSERQERMMDLTVEIEGN-IGKLEDALRRFTSAEILDGDNKYQCGRC 206
Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
AKK + I +L + L RF G G KL+KS+RFP L L + T S +
Sbjct: 207 KSYEKAKKKMTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLAPYMSGT-SDKS 263
Query: 495 RKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H GHY + ++W DD++VTA+ +VL AY+L Y
Sbjct: 264 PIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKGAYMLLY 323
Query: 553 KQ 554
+
Sbjct: 324 AR 325
>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 763
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 142/363 (39%), Gaps = 80/363 (22%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV--- 437
++ + S T P+L + LDI A ++E ALR PE L+ + + GV
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLD---ADNAYDCGVCLR 271
Query: 438 -VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERK 323
Query: 497 -----YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A + H G +GHY R N QW DDA VTA + L AYVLF
Sbjct: 324 AGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLF 383
Query: 552 YKQ 554
Y +
Sbjct: 384 YAR 386
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 141/356 (39%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL R P+ + L + SG
Sbjct: 71 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCPQGSFCMLCVMQNHLVQAFANSG 130
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 131 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 171
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + L + + T+ + IFGG L+S
Sbjct: 172 CL-------------SGYAKLDRQTQATTL------------------VHQIFGGCLRSR 200
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 201 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDALSGENAYMCARCKKKVP 258
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 259 ASKRFTIHRASNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVVYGL 315
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 316 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 371
>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 434
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 165/393 (41%), Gaps = 72/393 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 256
GL N GN C++NA LQ L + PF + E R + P T AF V +
Sbjct: 72 GLKNLGNTCYMNAPLQCLSATVPFARFFLENRWQRAVNTVNPLGTRGQLAGAFAKMVQEM 131
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
+ N + LD P+ F + ++ P S +G Q DAQEF+SF++D
Sbjct: 132 --------WQANFTYLD------PTNFRRSVCHYAP----SFAGG-DQHDAQEFISFLLD 172
Query: 317 QMHDELLKL-----QGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
+H++L ++ + T + A + +A E EW+ ++ S V
Sbjct: 173 GLHEDLNRILQKPANDDPTPEHEAELERLPQQIAGEQEWQRYQRRDDSLVV--------- 223
Query: 370 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS---EAVHTIEDALRLFSAPENLE 425
D F GQ ++ ++ +K S T F+ L L I + + T++ + F E +E
Sbjct: 224 --DYFQGQFRNKLECMTCHKTSTTYNAFMYLSLPIPTGRGMSKVTLQQCMDAFVKEEIME 281
Query: 426 -GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
G + A K + I L +L++HL RFSY KL V FPL+ +
Sbjct: 282 KGDAWKCPHCMALRKATKQLSISRLPPVLLIHLKRFSYKGPFVDKLETLVDFPLKDLDLT 341
Query: 485 DLLVTPSAEG----------------------RKYELVATVTHHGRDPSKGHYTADARYF 522
+ + +P G +YEL A H G S GHYTA
Sbjct: 342 NYMPSPLPPGVDKGFSQSSPIKLDDPRSQIPPYRYELYAVTNHFGSLTS-GHYTAFIAS- 399
Query: 523 NDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
W++ DD+ ++ +++ AY+LFYK+V
Sbjct: 400 KGSWVYCDDSRLSNAEGREIVAKPAYILFYKRV 432
>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
Length = 364
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 168/389 (43%), Gaps = 77/389 (19%)
Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
DL P GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A +
Sbjct: 15 DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
+ S + KKK S+ +P F L+ + N + Q+DA EFL
Sbjct: 75 Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVG-PK--NKSAVTRT------ 362
+F+++ +++ + LAE + + G PK N+ TR
Sbjct: 116 NFLINHINE-------------------IILAERNAGPSNGNPKASNQGGSTRNGTGSNG 156
Query: 363 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+ P+ + +IF G L S + S+ + F L +D+ +I LR FS
Sbjct: 157 ANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNT 214
Query: 422 ENLEGYRTSSTGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPL 478
E L N A+K ++++ L IL LHL RF Y Q + K+ V FPL
Sbjct: 215 ETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPL 274
Query: 479 QLVL--GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 536
+L L D V P R Y+L A V H G P++GHY + + + WL FDD V
Sbjct: 275 ELRLFNTSDDAVNPD---RLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDK 330
Query: 537 IGTSKV---------LH---DQAYVLFYK 553
I S + +H + Y+LFY+
Sbjct: 331 IEASTIEDFYGLTSDIHKSSETGYILFYQ 359
>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
[Oreochromis niloticus]
Length = 371
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 161/371 (43%), Gaps = 62/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + + NG L + E G K TQ + + +IF G L +
Sbjct: 141 QEEKSQERQQNG------KLVQNGGGEGEGGKE------TQQ---TWVHEIFQGTLTNET 185
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 186 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 243
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 244 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 298
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 299 RLYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 357
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 358 NSESGYILFYQ 368
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 62/365 (16%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
+L P GL+N GN C+ NA LQ L P LQ L ++ K + F +
Sbjct: 657 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 714
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
G S P SP + ++N + G ++EDA EFL + +D
Sbjct: 715 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 756
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK G +N + SL EE S + FGG
Sbjct: 757 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 787
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
L+S +K + + S + + L ++I + + T+E+AL F++ E L+G Y+ S
Sbjct: 788 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 846
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+ AKK + + IL + L RF G G KL+KS+RFP L L + S
Sbjct: 847 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA-PFMSGTSD 901
Query: 493 EGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
+ Y L A V H GHY + ++W DD++V + +VL AY+L
Sbjct: 902 KSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYML 961
Query: 551 FYKQV 555
Y +
Sbjct: 962 LYARC 966
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 160/359 (44%), Gaps = 37/359 (10%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + T TA + +
Sbjct: 58 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS-STHTALMEEFAKLIQAIW 116
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
SS +S PS F+ ++ + P Q+DAQEFL F++D +H+E
Sbjct: 117 TSSPNDVVS---------PSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 162
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ ++ + L L +++ K + R S + D+F GQLKS
Sbjct: 163 VNRVTARP---KPSPENLDHLPDDE-------KGRQMWRRYLEREDSRIGDLFVGQLKSS 212
Query: 382 VKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
+ +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 213 LTCTDCGFCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 270
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 271 ARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHA 329
Query: 496 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LFY+
Sbjct: 330 VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 387
>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 159/393 (40%), Gaps = 60/393 (15%)
Query: 203 GLINSGNLCFLNATLQALMSC---SPFVQLLQELRTRDIPKAGYPTLTAFVG----FVSD 255
GL N GN CF+N+ LQ+L + S + + L T + Y + + FV +
Sbjct: 247 GLRNLGNTCFMNSVLQSLSNIQEFSCYFNAMPSLETGKHKQKAYHSRSMKENLDDVFVVE 306
Query: 256 ------FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ GG K IS P V+ P RQ DA E
Sbjct: 307 ELRKVLLNLSQGGDGSKGAIS---------PECLFLVIWKVVPQFRGH-----RQHDAHE 352
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-LPS 368
FL +++D++H EL ++ + P N A++ + S
Sbjct: 353 FLRYMLDRLHTELQQVSFPVDGSGSGLAGGGGGGHKPGEGKPNPYNVPALSHLHTKGRNS 412
Query: 369 ALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSEA--------------VH 409
++++FGG L+S V+ S PFL L LDI Y++ V
Sbjct: 413 IVTNVFGGILQSEVRCLICGMESKKHDPFLDLSLDIPEKFYTKESAVDGGGDKDKDAPVC 472
Query: 410 TIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
I D L F+ E L E Y +S T K I+ L +L LH+ RF + +
Sbjct: 473 HISDCLSSFTEVEELAETELYYCNSCKCKQKST--KRFWIRRLPNVLCLHIKRFRWNNFY 530
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK-------YELVATVTHHGRDPSKGHYTADA 519
TK+ + FP+ + ++ E R+ Y+L A + HHG S GHYT+ A
Sbjct: 531 RTKIDLRISFPINALDMSQFVLNNGPETRRSNSSCNVYDLAAVIVHHGNGSSCGHYTSFA 590
Query: 520 RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
N W+HF+D +V + ++ V + Y+LFY
Sbjct: 591 -INNGVWMHFNDHTVKEVSSAAVADCKPYILFY 622
>gi|440799459|gb|ELR20504.1| ubiquitin specific protease 44 isoform 2, putative [Acanthamoeba
castellanii str. Neff]
Length = 549
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 68/300 (22%)
Query: 277 PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGAN 336
PF+ + +A+ K F P N +Q+DAQEFL +++D++HDEL TS+NG
Sbjct: 107 PFA--LLDALWK-FVPRFRNY-----QQQDAQEFLVYLLDKLHDEL-------TSLNGGR 151
Query: 337 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV--KAQGNKASATVQ 394
+ S + G K + S +S F G+L S V A GN S+ +
Sbjct: 152 EVVASPS--------GQKRQGE---------SIISKTFNGELLSQVTCSACGN-VSSRRE 193
Query: 395 PFLLLHLDIYSEAV----------------HTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
P+L L LDI + ++ D L F+ PE L GY +
Sbjct: 194 PYLDLLLDIPIQHAGGSRSTRGNRKTNVPSCSLYDCLDSFTWPEKLTGYYCEKCKSNQ-- 251
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEGRK 496
A K + IQTL RF + + K+ V FPL +G DL + E
Sbjct: 252 DASKRLAIQTLPD-------RFCWTTTSRAKVDTKVLFPL---IGLDLSAFCSEERENAI 301
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ--WLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
++L + V HHG PS GHYTA Y +Q WLHF+D V+ + QAY+LFY++
Sbjct: 302 FDLSSVVIHHGSGPSAGHYTAFC-YHTEQGTWLHFNDCRVSVSSPQEAASAQAYMLFYQR 360
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 163/373 (43%), Gaps = 65/373 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT + T
Sbjct: 147 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLSDLFNSIAT---- 200
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 201 --QKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 246
Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N +L S + DE E K +T + +IF G L +
Sbjct: 247 LQEEKKQEKQNGKLQNGSLES-SGGDEGE------KGDLT--------WVHEIFQGTLTN 291
Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
+ +A S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 292 ETRCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQ 349
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 350 EAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATN 404
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 405 PDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 463
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 464 SKNSESGYILFYQ 476
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 162/371 (43%), Gaps = 64/371 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 85 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLS------DLFNSI 136
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 137 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 184
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG +EE + K+ +T + +IF G L +
Sbjct: 185 LQEEKKQEKQNGKLQNGSIESEEGD--------KTDLT--------WVHEIFQGTLTNET 228
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 229 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 286
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 287 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 341
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 342 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 400
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 401 NSESGYILFYQ 411
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 162/393 (41%), Gaps = 67/393 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDIPKAGYPTLTAFVG----FVSD 255
GL N GN CF+N+ LQ+L + F + L T Y + + FV +
Sbjct: 230 GLRNLGNTCFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSRSMKENLDDVFVVE 289
Query: 256 ------FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ GG K IS P V+ P RQ DA E
Sbjct: 290 ELRKVLLNLSQGGDGSKGAIS---------PECLFLVIWKVVPQFRGH-----RQHDAHE 335
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-LPS 368
FL +++D++H EL Q S + ++ + +E P N A++ QS S
Sbjct: 336 FLRYMLDRLHTEL---QQVSFPVEISSPSAQKASETKS----NPYNIPALSHLQSKGRNS 388
Query: 369 ALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSE--------------AVH 409
++++FGG L+S V+ S PFL L LDI Y++ V
Sbjct: 389 IVTNVFGGILQSEVRCLICGMESKKHDPFLDLSLDIPEKFYNKDPPESGEKDKEGNPPVC 448
Query: 410 TIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
I D L F+ E L Y SS T K I+ L +L LH+ RF + +
Sbjct: 449 NISDCLASFTEVEELTETELYYCSSCKCKQKST--KRFWIRRLPNVLCLHIKRFRWNNFY 506
Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK-------YELVATVTHHGRDPSKGHYTADA 519
TK+ + FP+ + ++ E R+ Y+L A + HHG S GHYT+ A
Sbjct: 507 RTKIDLRISFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTSYA 566
Query: 520 RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
N W+HF+D SV + +S V + Y+LFY
Sbjct: 567 -INNGVWMHFNDHSVKEVSSSAVAECKPYILFY 598
>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFYYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 142/355 (40%), Gaps = 64/355 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKCCMLCTMQAHITR------ 134
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHRPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMRKA 175
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + V P +K + + IFGG +S
Sbjct: 176 CLPGHKQ----------------------VDPHSKDT---------TLIHQIFGGYWRSQ 204
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCQGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQKAP 262
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K++ + T +K+LIL L RFS KL K+V++P L + + + + Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVL 319
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G GHY + + QW DDA VTA G + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQ 374
>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 139/356 (39%), Gaps = 62/356 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+ LQ L P LQ + AG+ L A V +G
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQATG 167
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
R +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 168 --------------RILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S S + +LV +IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------NIFGGSLRSQ 238
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDDGSKVYQCERCKQK- 295
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V A+K + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKARKQLTVSKAPYVLTIHLKRFE--AHRSEKIDRKVDFASAIDM-KPFVSGPHEGNLK 351
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVLQVSEKTVFNQKAYMLFY 407
>gi|18422708|ref|NP_568667.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
gi|75262521|sp|Q9FIQ1.1|UBP21_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; Short=AtUBP21; AltName:
Full=Ubiquitin thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|9758510|dbj|BAB08918.1| unnamed protein product [Arabidopsis thaliana]
gi|332008037|gb|AED95420.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
Length = 732
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 136/352 (38%), Gaps = 51/352 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL NSGN CF+ + LQ P + L+ + G +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
S NI F L F+ D + QEDA EFL +D++
Sbjct: 224 SGYGINID-----------RFRDNLTYFSSDFMIN-----HQEDAHEFLQSFLDKL---- 263
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 381
E + PKN+ +Q + + ++FGG L S +
Sbjct: 264 ------------------------ERCCLDPKNQLGSVSSQDL--NIVDNVFGGGLMSTL 297
Query: 382 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 441
N S T +P L L+I E V+T+ AL F+ E LE T V T +
Sbjct: 298 CCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKE 354
Query: 442 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 500
K ++ L + HL RF+ K+ + FPL+L L + E +Y L
Sbjct: 355 KQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLY 414
Query: 501 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A V H G + GHY++ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 415 AFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 76 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 293
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
Y L A H G GHYTA R +W F+D+ S+V AY+LF
Sbjct: 294 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDS-------SQVRTSDAYLLF 345
Query: 552 YK 553
Y+
Sbjct: 346 YE 347
>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Metaseiulus occidentalis]
Length = 332
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 275 GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL--LKLQGESTSI 332
G SP+ F + ++ + P Q+DAQEFL +++ +H+++ +++Q T +
Sbjct: 53 GSAISPTEFRSQIQKYAPRFMGY-----SQQDAQEFLRYLLQGLHEDVNRVRIQPRGTCL 107
Query: 333 NGANTALVSLAEEDE-WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKAS 390
+ +L + E W + S + D+F GQLKS +K + S
Sbjct: 108 PEIDGSLSDHQKAAESWRRYLRVDDSRIV-----------DLFVGQLKSTLKCSECGHKS 156
Query: 391 ATVQPFLLLHLDIYSE--AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQ 447
T PF L L I T++ L F+ E L+G + K++ I
Sbjct: 157 VTFDPFWDLSLPISDSRCTASTLQQCLEYFTKEEVLDGDEKPTCDQCKKRQRMTKNLSIW 216
Query: 448 TLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATV 503
KIL+LHL RF + +KL +V+FPL+ + D+ S G KY L+
Sbjct: 217 KCPKILVLHLKRFGNSERYRSKLETNVQFPLRNL---DISAFMSNGGDSHFCKYNLIGVS 273
Query: 504 THHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 553
H G S GHYTA N QW +DA V+ +G S+V+ +AYVLFY+
Sbjct: 274 NHSGSTHS-GHYTATCLNPINRQWYSCNDARVSEVGESRVVSSEAYVLFYE 323
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 62/365 (16%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
+L P GL+N GN C+ NA LQ L P LQ L ++ K + F +
Sbjct: 645 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 702
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
G S P SP + ++N + G ++EDA EFL + +D
Sbjct: 703 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 744
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK G +N + SL EE S + FGG
Sbjct: 745 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 775
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
L+S +K + + S + + L ++I + + T+E+AL F++ E L+G Y+ S
Sbjct: 776 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 834
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+ AKK + + IL + L RF G G KL+KS+RFP L L + S
Sbjct: 835 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA-PFMSGTSD 889
Query: 493 EGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
+ Y L A V H GHY + ++W DD++V + +VL AY+L
Sbjct: 890 KSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYML 949
Query: 551 FYKQV 555
Y +
Sbjct: 950 LYARC 954
>gi|149692387|ref|XP_001501949.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Equus caballus]
Length = 373
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 140/354 (39%), Gaps = 43/354 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDM----- 99
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 145
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
L K + G+ A +E S +TR +F GQL S
Sbjct: 146 LKKYHRRRSCEKGSVPRCCRKAIANE--------TSIITR-----------LFEGQLNYS 186
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE-GYRTSSTGNAGVVT 439
V + + F +L L I SEA +++D L+ F + L R +
Sbjct: 187 VTCLTCENCTYKNEVFTVLSLPIPSEAQCSLQDCLQCFFQQDTLTWNNRIHCSFCETKQE 246
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
I K +I HL RF KL ++ +PL + + + KY L
Sbjct: 247 TAVRASISKAPKTVIFHLKRFDILGTMKRKLRTNIHYPLTNLDLTPYICPIFRKHSKYNL 306
Query: 500 VATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A V H G D GHYTA + W FDD V+ I + V AY+LFY
Sbjct: 307 CAVVNHFG-DLDGGHYTAFCKNSVTHAWYSFDDTRVSEIPDTSVQTATAYLLFY 359
>gi|444318954|ref|XP_004180134.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
gi|387513176|emb|CCH60615.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 159/374 (42%), Gaps = 56/374 (14%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
+GL+N G+ C++++ LQ LM FV L + + K P + G
Sbjct: 137 KGLVNMGSTCYMSSILQCLMHNPLFVDLSMKGVHYNYCKIQDPMKCMSCAIDNIISETYG 196
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
N ++DI N + V +++G Q+DA EFL FI++QMH++
Sbjct: 197 NKKTTPNEGLVDI-------------LNCSWRVNKNLAGYT-QQDAHEFLQFILNQMHND 242
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV----TRTQSFLPSAL-SDIFGG 376
L + + ++ E G K+ V ++ L + L IF G
Sbjct: 243 Y---------------KLNEIHDTNKQEMNGTDFKTMVNGNSSKEHLHLCNCLPHTIFQG 287
Query: 377 QLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
LKS++ KA + T+ P++ L LD+ ++ T+ + L F E L + +
Sbjct: 288 FLKSIISCSECKAQSQTTIDPYMDLSLDVKGKS--TLYECLESFHRTERLHDFTYNCKKC 345
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTP--- 490
A + + I L+ I+++ L RF + GS+ K++ V FPL L + + P
Sbjct: 346 NKSQDANRQLSILKLAPIMVIQLKRFEHLITGSSVKINDFVEFPLHLNM-KSFCTAPTPD 404
Query: 491 ------------SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 538
S YEL VTH G ++GHY + + W F+D+ V +
Sbjct: 405 TDPTNLNEKTNKSTPDMIYELTGIVTHRGT-VNEGHYITYTKTADGVWYQFNDSVVMKVP 463
Query: 539 TSKVLHDQAYVLFY 552
++L +QAY+L Y
Sbjct: 464 LEQMLKEQAYLLIY 477
>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 938
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 151/368 (41%), Gaps = 72/368 (19%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
L P GL N GN C+ NA LQ L P L Q ++ K G+ F +
Sbjct: 411 LFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQ--- 467
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
K+ IS P SP + + + GR R+EDA EFL ++D
Sbjct: 468 ------KAKEGIS------PLSPIGILSKIHKIGSHL-----GRGREEDAHEFLRCVVDT 510
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
M LK G S+ LAEE + +S FGG
Sbjct: 511 MQSICLKEVGVSSP----------LAEE---------------------TTLVSYTFGGY 539
Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE-GYRTSSTGNA 435
L+S +K + S + + L ++I + + T+E+AL F+APE L+ + + +
Sbjct: 540 LRSKIKCLRCLGKSERYERMMDLTVEIDGD-IGTLEEALGQFTAPEILDKDNKYNCSRCK 598
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
V A+K + + IL + L RF G+ KL+KSV+FP L + P G
Sbjct: 599 TYVKARKKLTVLEAPNILTIVLKRFQSGN--FEKLNKSVQFPEVLNMA------PYMSGT 650
Query: 496 K-----YELVATVTHHGRD----PSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 546
K Y L A V H D GHY + +W DD+ V + S+VL ++
Sbjct: 651 KDKSPLYSLYAVVVHLDLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSER 710
Query: 547 AYVLFYKQ 554
AY+L Y +
Sbjct: 711 AYMLLYAR 718
>gi|348583073|ref|XP_003477299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cavia
porcellus]
Length = 369
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 154/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 39 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 90
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 91 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 139
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + ++E P P+ + +IF G L +
Sbjct: 140 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 183
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q KL V FPL+L L S +
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYAKLSYRVVFPLEL-----RLFNTSGDATNPD 296
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 297 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 355
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 356 NSESGYILFYQ 366
>gi|449273422|gb|EMC82916.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Columba livia]
Length = 347
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 161/373 (43%), Gaps = 74/373 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 75
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 76 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-- 122
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
++ ++ + N ++ AEE+ NK +T + +IF G L +
Sbjct: 123 --MEKQNGKLKNGN---MNEAEEN--------NKQELT--------WVHEIFQGTLTNET 161
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 162 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 217
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 218 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVN 272
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 273 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 331
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 332 SKNSESGYILFYQ 344
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 151/362 (41%), Gaps = 65/362 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
G+ N GN C+LN+TLQAL V L ++I G LT V F
Sbjct: 122 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDPHHNSKCEQNILDGGGECLTCAVAKTLQF 181
Query: 257 D-TPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
SGG+ K PF + + + + P +QEDA EFL ++
Sbjct: 182 SHQKSGGAIK-----------PFYVYNKLKLICRTMVPG---------QQEDAHEFLRYL 221
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
++ M L K+K+ S + ++ IF
Sbjct: 222 LEGMERAYLT-----------------------------KHKATKLDNYSKETTPINQIF 252
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
GG +++ VK Q S T Q F L +DI +T+++AL + + E L+
Sbjct: 253 GGYIRTEVKCLQCQHVSTTFQHFQDLLVDI--RKANTLDEALNSYFSREQLDNNDYKCEA 310
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
V A K ++ K+L + L RFSY K+ + + F + +G+ L P
Sbjct: 311 CKRRVPATKQFTLERPPKVLCVQLKRFSYLG---GKISRHIGFKQTIDMGQYLWREPGES 367
Query: 494 GRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 551
++ Y+L++ VTH G + GHYTA A+ + Q+ FDD+ V I + VL AY++
Sbjct: 368 PKQLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDSCVRPISLNNVLSTNAYIMI 427
Query: 552 YK 553
++
Sbjct: 428 FE 429
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 161/384 (41%), Gaps = 72/384 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG--FVSDFDTPS 260
GL N GN CF+N++LQ L P +Q AF+G ++ D + +
Sbjct: 4 GLSNLGNTCFMNSSLQCLAHAVPLMQ-------------------AFLGGTYIKDLNRTN 44
Query: 261 -----GGSSKKKNISVLDIGR----PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
G ++ + + + R SP F+A + F P SG Q D+QEFL
Sbjct: 45 PLGMKGELAEAFGMLLQQLWRGGVSSVSPRSFKAKIGRFAP----QFSGYA-QHDSQEFL 99
Query: 312 SFIMDQMHDEL--LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
+F++D +H++ +K + + + LA E W +N S V
Sbjct: 100 AFLLDGLHEDTNRIKTKPYFETKDEPGRPDEELATE-AWSQYRARNNSLVV--------- 149
Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEG 426
D F G LKS + + S PF+ L L + +ED +R+F PE L+
Sbjct: 150 --DHFQGLLKSGLDCPKCAYHSVKFDPFMYLSLPLPESRRRPVALEDCMRVFLQPERLDE 207
Query: 427 YRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGR 484
V A K + + +L ++L++HL RFSY KL V FPL L LG
Sbjct: 208 SDAWYCPRCKEHVCADKKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTRVDFPLHGLDLGS 267
Query: 485 DLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFN------------DQWLHFD 530
+L A+G Y+ A H G GHYTA A+ + W FD
Sbjct: 268 YVL---RAQGVAPLYDCFAVSNHFG-SMGGGHYTAYAKLPGPPPGTAAGADGAEAWYCFD 323
Query: 531 DASVTAIGTSKVLHDQAYVLFYKQ 554
D+ V+A+ V AYVLFY++
Sbjct: 324 DSHVSAVEPEAVRSSAAYVLFYRR 347
>gi|291411127|ref|XP_002721844.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 146/354 (41%), Gaps = 66/354 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 260
GL N+GN C+LNA LQ L P +L ++ ++ ++ L A F+ +P
Sbjct: 83 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDRCILCAVETHFLWALHSPG 142
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P + + F + RQEDA EFL F +D
Sbjct: 143 ------------DVIQPC-----QVLAAGFHTN---------RQEDAHEFLMFALD---- 172
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+LK G +G VGP+ + ++ I GG +S
Sbjct: 173 -VLKAVGLPGLTDG----------------VGPQEDQSPSQ----------QIVGGHWRS 205
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
++ Q S T+ P+L + LDI + ++E AL+ PE L G T
Sbjct: 206 QIQCLQCQGISETLDPYLEIALDI--KTADSVEQALQHLVQPEELAGENAYHCATCLQKT 263
Query: 440 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K++ +Q+ K+L+ L RFS + KL V +P L + R + + Y
Sbjct: 264 AASKTLTLQSAGKVLLFVLKRFSEFT--GEKLGGQVHYPECLDM-RPYMSQQNGRPLDYV 320
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G GHY + N W DDA VTA T+ VL+ AYVLFY
Sbjct: 321 LYAVLVHVGLRCQSGHYFCYVKAGNGHWYKMDDAKVTACDTTCVLNQSAYVLFY 374
>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
[Oryctolagus cuniculus]
Length = 373
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 144/357 (40%), Gaps = 49/357 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLGSISPLVEYFLSGKYITALQKDCSDVATAFAYLMTDM----- 99
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 145
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
L K + G+ A +E S ++ +F GQL
Sbjct: 146 LKKYHRRRSYEKGSTQRCCRKAIANE-------------------TSIITQLFEGQLNYG 186
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
++ + + + F +L L I SE +++D L+ F + L ++ +
Sbjct: 187 IICLKCENCTYRNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCSFCET 243
Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
K+ ++ KI+I HL RF KL + +PL + + + K
Sbjct: 244 KQETAVRASISKAPKIIIFHLKRFDIQGTVKRKLRTDIHYPLTNLDLTPYICPVFRKHPK 303
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 304 YNLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPNTSVQTSTAYLLFY 359
>gi|50548343|ref|XP_501641.1| YALI0C09438p [Yarrowia lipolytica]
gi|49647508|emb|CAG81946.1| YALI0C09438p [Yarrowia lipolytica CLIB122]
Length = 526
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 174/417 (41%), Gaps = 71/417 (17%)
Query: 183 EVPMKAINEP-VKSVKDLLPRGLINSGNLCFLNATLQALM-------------------- 221
P + +P + S + L RGL+N G CF++ +Q L+
Sbjct: 129 HTPPSSFTQPSISSTRGL--RGLVNMGATCFMSVIVQTLIHNPLIRNDFLAQNHSLGLCA 186
Query: 222 ----------SCSPFVQLLQEL------RTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSK 265
+ S F +EL +RD+P L+ + + + +P+
Sbjct: 187 LKRAIADGTITYSDFCDYYEELPETIQRESRDLP------LSTLITWANATLSPN----- 235
Query: 266 KKNISVLDIGRPFSPSMFEAVLKNFTP--------DVPNSISGRPRQEDAQEFLSFIMDQ 317
N + FS A ++ + P ++ ++G Q+DA EF F++++
Sbjct: 236 PNNCIACALDDCFSKFYASATVQGYGPVSLMISSWNINRQLAGY-SQQDAHEFWQFLVNE 294
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
+H L E + ++ + + ++ W+++ + T + + FGG
Sbjct: 295 LHGSSLVRVEEGLDEDRGASSDIPVQFKNTWDSISESGSCSDTSDCTCISHR---TFGGT 351
Query: 378 LKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
L+S G + S T P + L L I + ++ L ++APE +E + + +
Sbjct: 352 LQSTATCNGCSHTSHTYDPLMDLSLQIPLKGQASLSSCLDKYTAPEQMEYFCENCKSHES 411
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GR 495
V K++ ++ +L L RF + S+K+ V FPL L + T S E G
Sbjct: 412 V---SKTLALKKPPVVLSFQLKRFQHTGSSSSKIDTHVEFPLYLDMSP---YTCSQESGL 465
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
YEL A V HHG + GHYT + + W +FDD ++T + +VL +AY+LFY
Sbjct: 466 VYELYAVVCHHG-SLNTGHYTCMVKGRDMHWYNFDDVTITRVDVQQVLAARAYLLFY 521
>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
Length = 892
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 149/370 (40%), Gaps = 77/370 (20%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD-T 258
P GLIN GN CF N LQ L P V LL++ R + + L F V +
Sbjct: 119 PCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCFLCEFQVHVERASHS 178
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P +PFSP + L P + ++ G +QEDA EF+ F +D M
Sbjct: 179 P----------------QPFSPINILSRL----PSIGGNL-GYGKQEDAHEFMRFAIDTM 217
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
V L E ++V P ++ + + IFGG L
Sbjct: 218 QS-------------------VCLDEFGGEKSVHPSSQET---------TLIQHIFGGHL 249
Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAG 436
+S V+ + +K S + + L ++I+ +A ++E+ L F+ E L G G
Sbjct: 250 QSQVICTKCSKISNQYENMMDLTVEIHGDAA-SLEECLDQFTVTEWLHGENMYKCDGCND 308
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL---------VLGRDLL 487
V A K + ++ IL + L RF G G KL+K V FP L V+G D+
Sbjct: 309 YVKASKRLTVRHAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPYMSKAVVGTDV- 365
Query: 488 VTPSAEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 545
Y+L A V H + GHY + F W DD VT + VL
Sbjct: 366 ---------YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQ 416
Query: 546 QAYVLFYKQV 555
AY+L Y +V
Sbjct: 417 GAYMLLYSRV 426
>gi|393213328|gb|EJC98825.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 846
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 165/370 (44%), Gaps = 51/370 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA-FVGFVSDFDTPSG 261
GL N GN C++N+ QAL C PF +L+ + + P +A G P+
Sbjct: 41 GLENFGNTCYVNSVFQALYFCHPFRELIIQAHDKSNPPVTNSNGSAPLTGPPIPIAPPTM 100
Query: 262 GSSKKK---NIS--VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
S+ + +IS LD G +P F LK N + +DA EFL ++++
Sbjct: 101 FSALRALFVHISSNSLDKGV-VAPRAFVEKLKKE-----NELFRSSMHQDAHEFLIYLLN 154
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
++ ++ L+ E+ ++ +++ ++ +T N + V D+F G
Sbjct: 155 KIAED---LEEEARNVRSGSSS------GEDRKTNSSTNSNIV-----------HDLFEG 194
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGN 434
L S + S+ + FL L +DI E ++ LR FSA E L + +
Sbjct: 195 VLTSETRCLTCETVSSRDEAFLDLSIDI--EQNSSVTACLRQFSASEMLCQKNKFFCDSC 252
Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL--GRDLLVTP 490
G+ A+K +KI+ L +L LHL RF Y KL V FPL+L L D V P
Sbjct: 253 CGLQEAEKRMKIKRLPNVLALHLKRFKYQEDVGKYIKLAYRVAFPLELRLFNTADDAVDP 312
Query: 491 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI---GTSKVLHDQ- 546
R YEL A V H G P GHY A + N+ WL FDD SV I SK D
Sbjct: 313 D---RLYELFAIVIHIGNGPYHGHYVAIVKS-NESWLVFDDDSVEKIKESDISKYYGDSN 368
Query: 547 ---AYVLFYK 553
AYVLFY+
Sbjct: 369 SGAAYVLFYQ 378
>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
vinifera]
Length = 940
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 150/369 (40%), Gaps = 75/369 (20%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
P GLIN GN CF N LQ L P V LL++ R + + F+ +F
Sbjct: 195 PCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDW-------CFLCEFQVH 247
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+S +PFSP + L P + ++ G +QEDA EF+ F +D M
Sbjct: 248 VERASHSP--------QPFSPINILSRL----PSIGGNL-GYGKQEDAHEFMRFAIDTMQ 294
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
V L E ++V P ++ + + IFGG L+
Sbjct: 295 S-------------------VCLDEFGGEKSVHPSSQET---------TLIQHIFGGHLQ 326
Query: 380 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGV 437
S V+ + +K S + + L ++I+ +A ++E+ L F+ E L G G
Sbjct: 327 SQVICTKCSKISNQYENMMDLTVEIHGDAA-SLEECLDQFTVTEWLHGENMYKCDGCNDY 385
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL---------VLGRDLLV 488
V A K + ++ IL + L RF G G KL+K V FP L V+G D+
Sbjct: 386 VKASKRLTVRHAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPYMSKAVVGTDV-- 441
Query: 489 TPSAEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 546
Y+L A V H + GHY + F W DD VT + VL
Sbjct: 442 --------YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQG 493
Query: 547 AYVLFYKQV 555
AY+L Y +V
Sbjct: 494 AYMLLYSRV 502
>gi|145524988|ref|XP_001448316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415860|emb|CAK80919.1| unnamed protein product [Paramecium tetraurelia]
Length = 482
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 155/363 (42%), Gaps = 28/363 (7%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDTP 259
GL N GN C+ N + + P V + P +G T AFV +
Sbjct: 65 GLKNLGNTCYFNTAIHCISHTQPLVDYFLSKAYKVNSSCPTSGNIT-KAFVSLMEQIWDD 123
Query: 260 SGGSSKKKNISVLDIG---RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
++ K+ L G +P++ + L N + QED QE LS+++D
Sbjct: 124 ENCFAESKDFKQLVQGQKLKPYNKCINPIKLLNLLQKYSKRFA-LGDQEDCQELLSYLLD 182
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS-AVTRTQSFLPSALSDIFG 375
+H EL + Q S SI T E V PK + + S + D+F
Sbjct: 183 LLHQELNRSQPNSKSITKDYTG----------EYVDPKWAADSWGEHLKINRSIIVDLFQ 232
Query: 376 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
GQLKS + Q S +PFL L+L I + V +I L LF PE L G N
Sbjct: 233 GQLKSTCQCQECGFQSHKFEPFLFLNLPIPKQKV-SIYKCLDLFQEPELLSGSCQWKCPN 291
Query: 435 AGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ KK +++ L LI+HL RF + + KL+ V FPL+L + + + +
Sbjct: 292 CKINRDFKKQIQLWKLPNQLIIHLKRFEFHHRKQVKLNTVVEFPLELDMAQYCVDQAIS- 350
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK--VLHDQAYVLF 551
Y+L A H G GHY A + N+ W ++D V I K V ++ AY+LF
Sbjct: 351 --CYQLYAVAQHDGSSYG-GHYVALCKAQNNNWYMYNDDQVFRIQDVKKMVQNEYAYMLF 407
Query: 552 YKQ 554
Y++
Sbjct: 408 YQR 410
>gi|194680862|ref|XP_001255688.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 575
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P E +L F R ++EDA EFL F ++ +
Sbjct: 147 --------ALLHAGEVIRPR--EDLLAGFH---------RHQKEDAHEFLMFTLNAVQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLSVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
Length = 353
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 155/369 (42%), Gaps = 63/369 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L + +S G E W + +IF G L S
Sbjct: 127 LAERNQSKPAGGKGAGDAGTPPEPTW---------------------VHEIFQGILTSET 165
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I L+ FS E L + + A
Sbjct: 166 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLKCFSNTETLCSDNKFKCDHCSSYQEA 223
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K + ++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 224 QKRMMLKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 280
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I +S +
Sbjct: 281 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDSSTIEDFYGLTSDIQKNS 339
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 340 ETGYILFYQ 348
>gi|11993482|gb|AAG42759.1|AF302669_1 ubiquitin-specific protease 21 [Arabidopsis thaliana]
Length = 737
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 136/352 (38%), Gaps = 51/352 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL NSGN CF+ + LQ P + L+ + G +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
S NI F L F+ D + QEDA EFL +D++
Sbjct: 224 SGYGINID-----------RFRDNLTYFSSDFMIN-----HQEDAHEFLQSFLDKL---- 263
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 381
E + PKN+ +Q + + ++FGG L S +
Sbjct: 264 ------------------------ERCCLDPKNQLGSVSSQDL--NIVDNVFGGGLMSTL 297
Query: 382 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 441
N S T +P L L+I E V+T+ AL F+ E LE T V T +
Sbjct: 298 CCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKE 354
Query: 442 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 500
K ++ L + HL RF+ K+ + FPL+L L + E +Y L
Sbjct: 355 KQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLY 414
Query: 501 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
A V H G + GHY++ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 415 AFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
Length = 899
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 169/400 (42%), Gaps = 86/400 (21%)
Query: 187 KAINEPVKSVKDLLP----------RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 236
KA++ P + V+D P GL N GN C++N+ LQ L
Sbjct: 542 KAVSSPAR-VRDFSPVKGQNVGRGLTGLKNLGNTCYMNSILQCL---------------- 584
Query: 237 DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
+ P LT + +SD S + N V++ ++ K
Sbjct: 585 ----SNTPQLTEYC--ISDKYKSYISRSNRTNGQVIEEVAALIKELWNGQYKCVASRDLR 638
Query: 297 SISGRPR-------QEDAQEFLSFIMDQMHDEL--LKLQGESTSINGANTALVSLAEEDE 347
+ G+ + Q+D+ EFL+ +MD +H +L L + + +I+ + A + + E
Sbjct: 639 YVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVARQRETISASEKAWLEFTKAKE 698
Query: 348 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSE 406
S + +F GQ+KS VK NK SAT + F L L++
Sbjct: 699 --------------------SMILHLFYGQIKSTVKCVACNKESATYECFSNLSLELPPN 738
Query: 407 A-VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 465
+ V + + ++ + E ++G+ + A K + I L +L++HL RF Y
Sbjct: 739 SNVCQLNQCMDMYFSGERIQGWNCPNCNTKR--DAIKKLDISKLPPVLVVHLKRF-YADP 795
Query: 466 GST----KLHKSVRFPLQLVLGRDLLVTP---SAEGR-----KYELVATVTHHGRDPSKG 513
G+T K +RFPL +L +TP AE R Y+L A H+G G
Sbjct: 796 GNTGAYIKKQNYLRFPLD-----NLEMTPYIARAESRAVTPKTYQLYAVSNHYG-TMEGG 849
Query: 514 HYTADARYFN-DQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
HYTA + N +W FDD V+A+ TS V+ AY+LFY
Sbjct: 850 HYTAFCKSANYGRWFKFDDQIVSALDTSNVVSSAAYILFY 889
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 145/355 (40%), Gaps = 64/355 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKD--TTLIHQIFGGYWRSQ 204
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
+K + S T P+L + LDI +A +++ AL + PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLAKPEELNGENAYHCGVCLQRAP 262
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 142/356 (39%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + TR + + L + SG
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 183 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 223
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + L + + T+ + IFGG L+S
Sbjct: 224 CL-------------SGCAKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSMCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 310
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVMYGL 367
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V A VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLRI 423
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 141/356 (39%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL R + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCHQGGFCMLCVMQNHIVQAFANSG 182
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 183 NAIKPVSF-IRDL---------KKIARHFRFG---------NQEDAHEFLRYTIDAMQKA 223
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + L + + T+ + IFGG L+S
Sbjct: 224 CL-------------SGCAKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 310
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 311 ASKRFTIHRTSSVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVVYGL 367
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 423
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 142/356 (39%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + TR + + L + SG
Sbjct: 121 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANSG 180
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 181 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 221
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + L + + T+ + IFGG L+S
Sbjct: 222 CL-------------SGCAKLDRQTQATTL------------------VHQIFGGYLRSR 250
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 251 VKCSMCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 308
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 309 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVMYGL 365
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW +D+ V A VL+ QAYVLFY ++
Sbjct: 366 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLRI 421
>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
Length = 365
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 161/383 (42%), Gaps = 51/383 (13%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
K++ D P G N GN C+ N+ LQAL C+PF + L E + A LT
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
D S SS+KK V+ +P F LK N + +DA
Sbjct: 70 LA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
EFL+++++++ + L K + + N +++ +A + +K + +
Sbjct: 113 EFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIV-------T 165
Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
+ IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 WVHKIFKGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLHAE 223
Query: 428 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 484
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSN 283
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 543
+ E Y L A V H G P+ GHY + + N WL FDD SV I S V
Sbjct: 284 TVDEYVDIE---YSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDESVEIIEKSAVQT 339
Query: 544 -----------HDQAYVLFYKQV 555
D Y+L Y+ +
Sbjct: 340 FFGSSQEYSSNTDHGYILLYESL 362
>gi|119929778|ref|XP_001255627.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 533
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 138/360 (38%), Gaps = 74/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 496
A K + + + S++L+L L RF+ S K + R+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEARYPQCLDL------QPYTSERKAGP 326
Query: 497 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 140/360 (38%), Gaps = 51/360 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+NA +Q L + R PK G +F +
Sbjct: 64 GLANLGNTCFMNAVMQCLTHTPALAAFCLDGEHRRFRPKGGNGGGGSFSAIYEMGEHVCR 123
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ ++ + SPS F L++ + RQEDA EF ++D MH++
Sbjct: 124 ALAGERRV--------VSPSAFVKNLRSISKTFRKG-----RQEDAHEFARCLLDAMHEK 170
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
+ + PKN T F +FGG+L+S
Sbjct: 171 CV----------------------EHARPKPPKNSPRAETTFVF------QVFGGRLRSQ 202
Query: 382 VKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
V + + S T F+ L LDI ++E AL+ + A E L+G Y+ G
Sbjct: 203 VTCKTCGRKSDTFDSFMDLSLDI--AKAKSVEAALKRYVAVEVLDGSNKYKCEMGGGKPH 260
Query: 438 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL-VLGRDLLVTPSAEG- 494
+T A K I +L + L RF Y G KL + V +P L + G P A G
Sbjct: 261 MTRATKQFTIDAAPLVLTVQLKRFEYVPFGRGKLTQFVEYPTSLDITGAMSDANPKARGV 320
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
KY L A + H G GHY + W DD V+A L+ +AY+LFY +
Sbjct: 321 EKYSLFAVLVHAGGSMHSGHYYCYVKAATGVWYEMDDEGVSATSERTALNQKAYLLFYAR 380
>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
Length = 353
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 159/369 (43%), Gaps = 63/369 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + +S G A + P P+ + +IF G L S
Sbjct: 127 LE-RTQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 165
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 166 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 223
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 496
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 224 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 280
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 544
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 281 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 339
Query: 545 DQAYVLFYK 553
+ Y+LFY+
Sbjct: 340 ETGYILFYQ 348
>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Oreochromis niloticus]
Length = 372
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 157/371 (42%), Gaps = 61/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 138
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
LQ E + N L E E ++ V +IF G L +
Sbjct: 139 -LLQEEKSQERQQNGKLGGGGGGGEGEGGKETQQTWV-----------HEIFQGTLTNET 186
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 187 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 244
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 245 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 299
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 300 RLYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 358
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 359 NSESGYILFYQ 369
>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
Length = 479
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 153/371 (41%), Gaps = 63/371 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 149 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLADLFHSIAT---- 202
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+KK + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 203 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 249
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
E N L + + + E P P+ + +IF G L +
Sbjct: 250 ----QEERKQEKQNGRLPNGSIDGEGSGGAPD------------PTWVHEIFQGTLTNET 293
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
+ S+ + FL L +D+ E +I LR FS E L ++ A
Sbjct: 294 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEHKYYCEECRSKQEA 351
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 494
K +K++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 352 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 406
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 544
R Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 407 RMYDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 465
Query: 545 --DQAYVLFYK 553
+ Y+LFY+
Sbjct: 466 NSESGYILFYQ 476
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 142/355 (40%), Gaps = 64/355 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKCCMLCTMQAHITR------ 134
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHRPGDVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMRKA 175
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L + V P +K + + IFGG +S
Sbjct: 176 CLPGHKQ----------------------VDPHSKDT---------TLIHQIFGGYWRSQ 204
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCQGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQKAP 262
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K++ + T +K+LIL L RFS KL K+V++P L + + + + Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVL 319
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G GHY + + QW DDA VTA G + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQ 374
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 146/373 (39%), Gaps = 84/373 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQL-LQEL----------RTRDIPKAGYPTLTAF 249
P GL N GN C+LN+ LQ L P L L R R+ P + L
Sbjct: 17 PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCDSAVDRKRECP---FCILEKR 73
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ D +PS ++ L+ F RQEDA E
Sbjct: 74 IVRSLSMDLTQD-----------------APSKIQSCLRIFAEHFR-----LGRQEDAHE 111
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL +++D H+ L+L+ N N GP S V
Sbjct: 112 FLRYVIDACHNTCLRLKKLRRKGNNDN---------------GPSTTSVV---------- 146
Query: 370 LSDIFGGQLKSVVK-----AQGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPE 422
DIFGG L+S VK A+ NK +DI + +H +++ AL+ F PE
Sbjct: 147 -KDIFGGALQSQVKCLSCGAESNKTDEI--------MDISLDVLHFNSLKQALQNFFQPE 197
Query: 423 NLEGYRTSSTGNAG-VVTAKKSVKIQTLSKILILHLMRFS--YGSQGSTKLHKSVRFPLQ 479
L+G N +V+A+K + I +L++ L RF YG K+ K + F
Sbjct: 198 VLDGNNKYKCDNCKKLVSARKQMSILQAPNVLVIQLKRFEGLYGG----KIDKLIAFEEV 253
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
LVL + +Y L AT+ H G P GHY A + +W +D+ V+
Sbjct: 254 LVLSSYMNKASQDSHPEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTL 313
Query: 540 SKVLHDQAYVLFY 552
VL ++ Y+LF+
Sbjct: 314 QGVLSEKVYILFF 326
>gi|170031964|ref|XP_001843853.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871433|gb|EDS34816.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 169/380 (44%), Gaps = 58/380 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + E + ++ K TL + + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--KRTKETLLSCLA-----DLFYSI 77
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + + +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 78 ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 323 LKLQGES----------TSING-ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
L + ++ TS NG TA SL G ++ + Q P+ +
Sbjct: 127 LAERNQAKGGTAAGGTTTSKNGHVGTATPSLNHLLNGCGTG---ENGTQQPQE--PTWVH 181
Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
+IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 182 EIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKF 239
Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRD 485
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 240 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSD 299
Query: 486 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH- 544
V P R Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 300 DAVNPD---RLYDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDF 355
Query: 545 -----------DQAYVLFYK 553
+ Y+LFY+
Sbjct: 356 YGLTSDIQKSSETGYILFYQ 375
>gi|225465557|ref|XP_002275104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
gi|297745125|emb|CBI38964.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 156/369 (42%), Gaps = 45/369 (12%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C+ N+ LQAL C PF + L E ++ G P F +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYAKN-KNLGDPEENLLTCLADLF---TQI 79
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
SS+KK V+ +P F ++ N + +DA EFL+++++++ D L
Sbjct: 80 SSQKKKTGVI------APKRFVQRVRK-----QNELFRSYMHQDAHEFLNYLLNELVDIL 128
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
K + ++ + A GP+N + L + + F G L +
Sbjct: 129 EKESHVAKTLPDESLPSGQTAN-------GPRNAPTNGVQREPLVTWVHKNFQGLLTNET 181
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTA 440
+ + +A + FL L LDI E +I L+ FS+ E L + + A
Sbjct: 182 RCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEA 239
Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
+K +KI+ IL++HL RF Y Q KL V FPL+L L + S +Y
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYMEQLGRHKKLSYRVVFPLELKLANSMEDVDS----EYT 295
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL------------HDQ 546
L A V H G P+ GHY + + N WL FDD +V I S V D
Sbjct: 296 LFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDH 354
Query: 547 AYVLFYKQV 555
Y+LFY+ +
Sbjct: 355 GYILFYESL 363
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 62/365 (16%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
+L P GL+N GN C+ NA LQ L P LQ L ++ K + F +
Sbjct: 467 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 524
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
G S P SP + ++N + G ++EDA EFL + +D
Sbjct: 525 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 566
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
M LK G +N + SL EE S + FGG
Sbjct: 567 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 597
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
L+S +K + + S + + L ++I + + T+E+AL F++ E L+G Y+ S
Sbjct: 598 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 656
Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
+ AKK + + IL + L RF G G KL+KS+RFP L L + S
Sbjct: 657 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA-PFMSGTSD 711
Query: 493 EGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 550
+ Y L A V H GHY + ++W DD++V + +VL AY+L
Sbjct: 712 KSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYML 771
Query: 551 FYKQV 555
Y +
Sbjct: 772 LYARC 776
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 137/356 (38%), Gaps = 58/356 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL R + + L + SG
Sbjct: 122 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSREHARSCHQGSFCMLCVMQNHIVQAFANSG 181
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 182 NAIKPVSF-IRDLKK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 222
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L N A Q+ + + IFGG L+S
Sbjct: 223 CL-------------------------------NGYAKLDRQTQATTLVHQIFGGYLRSR 251
Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 439
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 252 VKCSVCKSVSDTYDPYLDIALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 309
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 310 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQNSGEPVMYGL 366
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
A + H G GHY + N QW DD+ V VL QAYVLFY ++
Sbjct: 367 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMDDSLVHPSSGKAVLSQQAYVLFYLRI 422
>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 365
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 161/383 (42%), Gaps = 51/383 (13%)
Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
K++ D P G N GN C+ N+ LQAL C+PF + L E + A LT
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
D S SS+KK V+ +P F LK N + +DA
Sbjct: 70 LA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112
Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
EFL+++++++ + L K + + N +++ +A + +K + +
Sbjct: 113 EFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIV-------T 165
Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
+ IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 WVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLHAE 223
Query: 428 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 484
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSN 283
Query: 485 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 543
+ E Y L A V H G P+ GHY + + N WL FDD SV I S V
Sbjct: 284 TVDEYVDIE---YSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDESVEIIEESAVQT 339
Query: 544 -----------HDQAYVLFYKQV 555
D Y+L Y+ +
Sbjct: 340 FFGSSQEYSSNTDHGYILLYESL 362
>gi|395822175|ref|XP_003784399.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Otolemur garnettii]
Length = 375
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 148/360 (41%), Gaps = 55/360 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 47 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCSEVATAFAYLMTDM----- 101
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P + Q+DAQEFL ++++++H+
Sbjct: 102 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 147
Query: 322 LLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
L K E SI +++ S +TR +F GQ
Sbjct: 148 LKKYHRRRSYEKRSIQRCCRKVIA------------NETSIITR-----------LFEGQ 184
Query: 378 LK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
L S+V + + + F +L L I E +++D L+ F + L + A
Sbjct: 185 LNYSIVCLKCENCTYRNEVFTVLSLPIPCEYECSLQDCLQCFFQQDTLTW--NNQIRCAF 242
Query: 437 VVTAKKSVKIQTLS---KILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
T +++ ++S KI++ HL RF KL ++ +PL + + +
Sbjct: 243 CETNQETAVRASISKAPKIIVFHLKRFDIQGMMKRKLRTNIHYPLTNLDLTSYICPIFRK 302
Query: 494 GRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
KY L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 303 HPKYNLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFY 361
>gi|194034732|ref|XP_001927691.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Sus scrofa]
Length = 373
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 49/357 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDM----- 99
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P + + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSECVSPEIFRSALGNLYPAL-----MKKTQQDAQEFLIYVLNELHEA 145
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
L K + N + P+ + ++S S ++ +F GQL S
Sbjct: 146 LKKYHRRRSYENRS----------------IPRCCRKMIASES---SIITRLFEGQLSYS 186
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
++ + + + F +L L I SE +++D L+ F + L ++ +
Sbjct: 187 IICLKCENCTYKNEVFTVLPLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCSFCET 243
Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
K+ ++ KI++ HL RF KL + +PL + + + K
Sbjct: 244 KQETAVRASISKAPKIIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYICPIFRKHPK 303
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 304 YNLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFY 359
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 154/355 (43%), Gaps = 57/355 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L+ P +LL G+ + G V+ F P
Sbjct: 39 GLQNLGNTCFMNSVLQLLVHTPPLAELLLS--------GGFGRV--HNGAVNGF-YPIQL 87
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+ + + S+ R P +P F L+ + RQEDA EFL ++D MH+
Sbjct: 88 ARELVSRSLAQTTRSPLAPMKFAKSLRRISRSFRLG-----RQEDAHEFLIALLDAMHE- 141
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
SI G + PK + +T S + IFGG+++S
Sbjct: 142 --------ASIAG----------------ITPKPSPELAQT-----SFIYRIFGGRMRSQ 172
Query: 382 VK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
VK ++ S T P + L L+I + +++ AL F+ E L+G Y+ A
Sbjct: 173 VKCSECGYESNTYDPCIDLSLEITRAS--SVKRALEHFTKGEVLDGGNKYKCPRQQKA-- 228
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
V A K + + + +L++ L RF + G K+ K + F L+L LG + P Y
Sbjct: 229 VRAVKRMTVDSAPNVLMIQLKRFEFSFSGH-KISKKIDFDLELDLGPFMSEAPLVPA-LY 286
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
+L A + H G GHY A R N W DD V + +V+ +AY+LFY
Sbjct: 287 DLYAVLVHSGHSVHSGHYYAYVRAPNGIWHICDDTHVAQVAERQVMAQKAYILFY 341
>gi|390353834|ref|XP_001179436.2| PREDICTED: uncharacterized protein LOC754104 [Strongylocentrotus
purpuratus]
Length = 1340
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 142/357 (39%), Gaps = 63/357 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
GLIN GN CFLN+TLQ L +P LL + G+ L + F P+
Sbjct: 135 GLINMGNTCFLNSTLQCLTYTAPLANYLLSHQHKEECRSYGFCILCDLYTHIQRAFQHPN 194
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
+ P LK+ + I RQEDA EFL ++++ M
Sbjct: 195 ---------------QAIRPMNMIHKLKSIAKHM--HIG---RQEDAHEFLRYVIEAM-- 232
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ + ++G + L ++E S + IFGG +S
Sbjct: 233 -------QKSCLSGYDNKLDRYSKET---------------------SPVHQIFGGYYRS 264
Query: 381 -VVKAQGNKASATVQPFLLLHLDI-YSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
V+ A S T PFL + LDI ++ +VH AL E L+G Y+
Sbjct: 265 RVICAACQSKSDTFDPFLDISLDIKHAPSVHK---ALNRLIQSEMLDGDNAYQCKRCNRK 321
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
V A+K I IL L L RF + K++K V + L L R +
Sbjct: 322 --VLAQKRFTIHRCPNILTLCLKRFEFNRFSMGKINKEVSYSEYLNL-RPFMSETKGPAV 378
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y+L A + H G + GHY R N W +D+ V+ ++VL+ AYVLFY
Sbjct: 379 GYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWYCMNDSYVSQCSLNRVLNQNAYVLFY 435
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 146/373 (39%), Gaps = 84/373 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQL-LQEL----------RTRDIPKAGYPTLTAF 249
P GL N GN C+LN+ LQ L P L L R R+ P + L
Sbjct: 21 PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCDSAVDRKRECP---FCILEKR 77
Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ D +PS ++ L+ F RQEDA E
Sbjct: 78 IVRSLSMDLTQD-----------------APSKIQSCLRIFAEHFR-----LGRQEDAHE 115
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL +++D H+ L+L+ N N GP S V
Sbjct: 116 FLRYVIDACHNTCLRLKKLRRKGNNDN---------------GPSTTSVV---------- 150
Query: 370 LSDIFGGQLKSVVK-----AQGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPE 422
DIFGG L+S VK A+ NK +DI + +H +++ AL+ F PE
Sbjct: 151 -KDIFGGALQSQVKCLSCGAESNKTDEI--------MDISLDVLHFNSLKQALQNFFQPE 201
Query: 423 NLEGYRTSSTGNAG-VVTAKKSVKIQTLSKILILHLMRFS--YGSQGSTKLHKSVRFPLQ 479
L+G N +V+A+K + I +L++ L RF YG K+ K + F
Sbjct: 202 VLDGNNKYKCDNCKKLVSARKQMSILQAPNVLVIQLKRFEGLYGG----KIDKLIAFEEV 257
Query: 480 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 539
LVL + +Y L AT+ H G P GHY A + +W +D+ V+
Sbjct: 258 LVLSSYMNKASQDSHPEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTL 317
Query: 540 SKVLHDQAYVLFY 552
VL ++ Y+LF+
Sbjct: 318 QGVLSEKVYILFF 330
>gi|395843770|ref|XP_003794646.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Otolemur garnettii]
Length = 366
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 67/373 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L+ + + NG L + ET NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNG------KLKNGNMNET-AENNKPELT--------WVHEIFQGTLTNET 180
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDAVN 291
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 350
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 351 SKNSESGYILFYQ 363
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 141/359 (39%), Gaps = 64/359 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+T+Q L P LL + +R G+ L + SG
Sbjct: 125 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHSRSCAPGGFCMLCVMQNHMIQTFANSG 184
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR---QEDAQEFLSFIMDQM 318
+ K PFS F D+ I+ R QEDA EFL + +D M
Sbjct: 185 NAIK-----------PFS----------FIRDL-KKIARHFRFGSQEDAHEFLRYTIDAM 222
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
L N A Q+ + + IFGG L
Sbjct: 223 QKACL-------------------------------NGHAKLDRQTQATTLVHQIFGGYL 251
Query: 379 KSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
+S VK K+ S T P+L + L+I A I AL LF P+ L G
Sbjct: 252 RSRVKCSLCKSVSDTYDPYLDVALEIRQTA--NIVRALELFVKPDVLSGENAYMCAKCKK 309
Query: 438 -VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 496
V A K I S +L L L RF+ G K+ K V +P L + R + S +
Sbjct: 310 KVPASKRFSIHRASNVLTLSLKRFANFCGG--KITKDVGYPEFLNI-RPYMSQSSGDPVM 366
Query: 497 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 555
Y L A + H G GHY + N QW +D+SV + VL+ QAYVLFY ++
Sbjct: 367 YGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHSSNIKVVLNQQAYVLFYLRI 425
>gi|410074817|ref|XP_003954991.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
gi|372461573|emb|CCF55856.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
Length = 440
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 165/377 (43%), Gaps = 52/377 (13%)
Query: 187 KAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPT 245
+ I+ P + +D L G +N G+ CF+++ LQ L+ +PF VQ K P
Sbjct: 107 RNISFPTVTNRDGL-HGFVNMGSTCFMSSILQVLIH-NPFIVQNSMSQSHYSSCKIRNPN 164
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSM--FEAVLKNFTPDVPNSISGRPR 303
G K N G+P + F ++L N + + ++ +G
Sbjct: 165 NCISCALDEIIAESYGNFVKYNN------GKPINQYHDGFISML-NCSWKINDNFAGYS- 216
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
Q+DA EFL FI++++H + KL T+ + + L+
Sbjct: 217 QQDAHEFLQFILNRLHRDY-KLTSTYTNNTDSCSCLIH---------------------- 253
Query: 364 SFLPSALSDIFGGQLKS-VVKAQGNKASATV-QPFLLLHLDIYSEAVHTIEDALRLFSAP 421
IF G+LKS +V + + S TV P++ L LDI +A T+ L F
Sbjct: 254 --------SIFQGKLKSSIVCPECHDNSKTVTDPYIDLSLDIKDKA--TLYQCLDSFHKK 303
Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQL 480
E L Y + K + I L +L+L L RF + + G + KL+ + FP L
Sbjct: 304 ETLHDYNYHCPNCDTMQDPIKQLTIDKLPPVLVLQLKRFEHLNNGQNVKLNAFIEFPTYL 363
Query: 481 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 540
+ + + YEL ++H G ++GHY A + ++ W F+D+ VT+I
Sbjct: 364 NMKKYCHTEENNSSIIYELNGVISHIGT-VNEGHYIATLKLDSNNWFKFNDSMVTSISEE 422
Query: 541 KVLHDQAYVLFY--KQV 555
+VL DQAY+LFY KQV
Sbjct: 423 EVLKDQAYLLFYSIKQV 439
>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 535
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 142/356 (39%), Gaps = 65/356 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++NATLQ L P + L+ G T
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYM---------------LSQQHGTTCRRQTSCML 125
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ + +++ + +L F R +QEDA E+L FI+D M
Sbjct: 126 CTLQAHLTRVLCHPGRVLRPLPLLLAAF---------HRHKQEDAHEYLMFILDAMQQ-- 174
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
L E+ + P++ + + + +FGG +S +
Sbjct: 175 -----------------ACLPEDKLSDPECPQDSTLIQQ-----------LFGGYWRSQI 206
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 438
+ S+T++P+L + LDI H++ AL PE LEG Y S V
Sbjct: 207 QCLHCQGISSTLEPYLDISLDIGD--AHSVSQALEQLMKPELLEGENAYHCSKCLEK--V 262
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K + + T K+LIL L RFS K+ K V++P +L + + L A Y
Sbjct: 263 PASKVLTLHTSPKVLILVLRRFS--DLTGNKMTKEVQYPERLDM-QHCLSEQRAGPLVYV 319
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H GR GHY + N QW DDA V+A + L AYVLFY Q
Sbjct: 320 LYAVLVHTGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 144/355 (40%), Gaps = 64/355 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKD--TTLIHQIFGGYWRSQ 204
Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 499
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 500 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|291290972|ref|NP_001073699.2| ubiquitin specific peptidase 50 [Bos taurus]
Length = 378
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 154/361 (42%), Gaps = 57/361 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 50 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKDCSEVATAFAYVMTDM----- 104
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P + + Q+DAQEFL ++++++H+
Sbjct: 105 ---------WLGDSDCVSPEIFRSALGNLYP-----VFMKKTQQDAQEFLIYVLNELHEA 150
Query: 322 LLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
L K E SI +++ N+S++ ++ +F GQ
Sbjct: 151 LKKYHRRKAYEKRSIPRCCRKMIA-------------NESSI----------ITRLFEGQ 187
Query: 378 LK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
L S+V + + + F ++ L I SE +++D L+ F + L ++ +
Sbjct: 188 LSYSIVCLKCENCTYKNEVFTIISLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCS 244
Query: 437 VVTAKKSVKIQ-TLSKI---LILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
K+ ++ T+SK+ ++ HL RF KL + +PL + +
Sbjct: 245 FCETKQEAAVRATISKVPKTIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYICPIFR 304
Query: 493 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLF 551
+ KY L A V H G D GHYTA ++ Q W FDD V+ I + V AY+LF
Sbjct: 305 KHPKYNLCAVVNHFG-DLDGGHYTAFSKNSVTQAWYSFDDTRVSEIPDTAVQTAAAYLLF 363
Query: 552 Y 552
Y
Sbjct: 364 Y 364
>gi|299470395|emb|CBN80156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 782
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 151/378 (39%), Gaps = 78/378 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----------------- 245
GL N GN C+LN+ LQ L P L Q L + + T
Sbjct: 135 GLENMGNTCYLNSILQCLSYVPP---LAQHLLNGSYSQGSHATCSESPFSFNGSTDFCED 191
Query: 246 --LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR 303
L A V GS++++ I P F L+ R R
Sbjct: 192 DILGAMQKLVGQIHQTKSGSAEQQAIR---------PRTFSDNLRKIGEKF-----RRGR 237
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
QEDA EFL ++D+M L+ +G V P + + T
Sbjct: 238 QEDAHEFLRHLVDKMAGSYLERRG-----------------------VDPFAPNRLAET- 273
Query: 364 SFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDIY---SEAV----HTIEDAL 415
+ + +FGG L+S +K ++ S T PF+ L +++ S V +++ AL
Sbjct: 274 ----TPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAAL 329
Query: 416 RLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 474
R F+APE L G G +V A+K++ + L+ L RF + + G K+ +
Sbjct: 330 RRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGF-TNGPRKVKDHI 388
Query: 475 RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 534
F +L +L V+ Y+L V H G+ S GHY A R W +D+ V
Sbjct: 389 SFGDKL----NLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVV 444
Query: 535 TAIGTSKVLHDQAYVLFY 552
T + VL D+AYVLFY
Sbjct: 445 TKVTLDTVLRDKAYVLFY 462
>gi|426355440|ref|XP_004045130.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gorilla
gorilla gorilla]
Length = 1237
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 141/354 (39%), Gaps = 75/354 (21%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF NA LQ L P + S
Sbjct: 48 GLQNLGNTCFANAALQCLTYTPPLANYML----------------------------SHE 79
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
SK SVL + + + +NFT + G QEDA EFL + +D M
Sbjct: 80 HSKTCKCSVLCL---LCVMIKPCLYQNFTGIARHFRFGN--QEDAHEFLQYTVDAM---- 130
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ +NG+N L + T+ + IFGG L+S V
Sbjct: 131 -----QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRSRV 163
Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 438
K K S T P+L + L+I +A ++ AL F PE L+G Y+ S +V
Sbjct: 164 KCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK--MV 219
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K I S +L L L RF+ + G K+ K V++P L + R + P+ E Y
Sbjct: 220 PASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIVYV 276
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 277 LYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 330
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 142/356 (39%), Gaps = 66/356 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
GL N GN C++NA+LQ L P +L + ++ + L ++ P
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHKCCMLCTMEAHITRALHCP- 139
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
G PS +A+ F R +QEDA EFL FI+D M
Sbjct: 140 --------------GHVIQPS--QALAAGF---------HRGKQEDAHEFLMFIVDAMKK 174
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L + A+ D +T + + IFGG +S
Sbjct: 175 ACLPGHKQ--------------ADHDSEDT-----------------TLIHQIFGGCWRS 203
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVV 438
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 204 QIKCLHCQGVSDTFDPYLDIALDI--QAAQSVKQALEQVVKPEELNGENAYHCGLCLQKA 261
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K+ + T +K+LIL L RFS KL K+V++P L + + + + Y
Sbjct: 262 PASKTFTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDI-QPYMSQQNTGPLVYV 318
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQ 374
>gi|326919202|ref|XP_003205871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Meleagris
gallopavo]
Length = 578
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 248 GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 299
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 300 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 348
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
+ + + ++ AEE+ NK +T + +IF G L +
Sbjct: 349 QEEKKQEKQNGKLKNGNMNEAEEN--------NKQELT--------WVHEIFQGTLTNET 392
Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
+ S+ + FL L +D+ E +I LR FS E L + Y +
Sbjct: 393 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETC--CSKQ 448
Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 449 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVN 503
Query: 495 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 504 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 562
Query: 545 ----DQAYVLFYK 553
+ Y+LFY+
Sbjct: 563 SKNSESGYILFYQ 575
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 143/357 (40%), Gaps = 66/357 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 145
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG D+ +P + S + +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DVMKP--------------SQILTSAFHKHQQEDAHEFLMFTLETMH 180
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+ L++ +S P++ S + DIFGG +
Sbjct: 181 ESCLQVHRQSDPT--------------------PQDTSPI-----------HDIFGGWWR 209
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 437
S +K S T PFL + LDI S ++ AL E L G G
Sbjct: 210 SQIKCLHCQGTSHTFDPFLDVPLDISS--AQSVNQALWDTGKSEELLGENAYYCGRCRQK 267
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+ Y
Sbjct: 268 MPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPY 324
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H G + GHY + + +W DD VT + VL++ AYVLFY Q
Sbjct: 325 ALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|291411119|ref|XP_002721840.1| PREDICTED: ubiquitin specific peptidase 46 [Oryctolagus cuniculus]
Length = 360
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 162/375 (43%), Gaps = 71/375 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 30 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 81
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 82 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 129
Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N + AE NK+ +T + +IF G L +
Sbjct: 130 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKAELT--------WVHEIFQGTLTN 172
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 173 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 230
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 231 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 283
Query: 495 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 284 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 342
Query: 545 ------DQAYVLFYK 553
+ Y+LFY+
Sbjct: 343 DISKNSESGYILFYQ 357
>gi|125852016|ref|XP_692003.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Danio
rerio]
Length = 404
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 159/367 (43%), Gaps = 50/367 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CFLNA +Q L TR + Y + A+V P
Sbjct: 63 GLRNVGNTCFLNAIVQCLS------------HTRSL--RDYCLMRAYVQDKHSNQEPVLM 108
Query: 263 SSKKKNISVL---DIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K ++ L D G +P F V K P SG Q+DAQEFL F++D++
Sbjct: 109 DEFSKVLAGLWECDAGETTVNPGKFYRVFKESVP----YFSGYS-QQDAQEFLRFLLDRL 163
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
H E+ + + ++ + ++ T ++ A Q L S + D+F
Sbjct: 164 HTEINRRPSKRPAV---------IERKEPAYTRFRISEEAFAMWQRHLDRDDSKIVDLFS 214
Query: 376 GQLKSVVKAQ-GNKASATVQPFLLLHLDI-----YSEAVHTIEDALRLFSAPENLEGYRT 429
GQL+S + + S T F L L I Y AV T+ + L LFS E L+ +
Sbjct: 215 GQLRSSLHCSVCSHYSNTFDVFCDLSLPIPKKSDYGRAV-TLRECLDLFSQEEKLDKENS 273
Query: 430 SSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLL 487
T + K + IQ ++L++HL RF+ +K V FPL L LG L
Sbjct: 274 PMCERCNRRTESTKRLTIQRFPRVLVIHLNRFAMSRFSISKSTVPVSFPLTALDLG---L 330
Query: 488 VTPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 546
P G Y+L A H G + GHYTA R + W ++D+ V AI K+ +Q
Sbjct: 331 FGPVDCGPVLYDLYAVCNHSG-TVNMGHYTAACRE-EEGWCFYNDSCVDAISEEKLQSNQ 388
Query: 547 AYVLFYK 553
AYVLFY+
Sbjct: 389 AYVLFYE 395
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 69/367 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGF--VSDFDTPS 260
GL N GN CFLN+ LQ C L R K Y T +F + + +
Sbjct: 3 GLANLGNTCFLNSVLQ----CLTHTPALANFALRGEHKK-YKTGGSFNALYEIGEHVARA 57
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
SS GR +P+ A++KN GR QEDA E ++D MH
Sbjct: 58 LNSS----------GRTIAPT---ALVKNLRALSKTFRKGR--QEDAHELARCLLDAMHK 102
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+ + E V PK R ++ S + +FGG+L+S
Sbjct: 103 KCV-------------------------EVVKPKISPNSARAET---SFVWKVFGGRLRS 134
Query: 381 VVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRT---SSTG 433
V + + S T PFL L L++ ++ A ++F+ E L+G YR S+
Sbjct: 135 QVNCKTCGRNSETFDPFLDLSLEV--GRAKSVLGAFKMFTHTEVLDGDNKYRCEGKSANS 192
Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
+ + A K + +L L L RF+Y G KL+ V +PL+L D+ S E
Sbjct: 193 KSHLTKASKQFTVNQAPNVLALQLKRFAYVPFGRGKLNHFVEYPLEL----DITPYTSDE 248
Query: 494 GRK------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 547
G Y+L + H G + GHY + W DD +T++ VL QA
Sbjct: 249 GLTSRGKAVYDLYGVLVHAGNSSNSGHYYCFVKVATGTWCLMDDDEITSVSEKVVLKQQA 308
Query: 548 YVLFYKQ 554
Y+LFY +
Sbjct: 309 YLLFYAR 315
>gi|291411123|ref|XP_002721842.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 146/354 (41%), Gaps = 66/354 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 260
GL N+GN C+LNA LQ L P +L ++ ++ ++ L A F+ +P
Sbjct: 83 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDRCILCAVETHFLWALHSPG 142
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P + + F + RQEDA EFL F +D
Sbjct: 143 ------------DVIQPC-----QVLAAGFHTN---------RQEDAHEFLMFALD---- 172
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+LK G +G VGP+ + ++ I GG +S
Sbjct: 173 -VLKAAGLPGLTDG----------------VGPQEDQSPSQ----------QIVGGHWRS 205
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
++ Q S T+ P+L + LDI + ++E AL+ PE L G T
Sbjct: 206 QIQCLQCQGISETLDPYLEIALDI--KTADSVEQALQHLVQPEELAGENAYHCATCRQKT 263
Query: 440 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K++ +Q+ K+L+ L RFS + KL V +P L + R + + Y
Sbjct: 264 AASKTLTLQSAGKVLLFVLKRFSEFT--GEKLGGQVHYPECLDM-RPYMSQQNGRPLDYV 320
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G GHY + + W DDA VTA T+ VL+ AYVLFY
Sbjct: 321 LYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFY 374
>gi|90079713|dbj|BAE89536.1| unnamed protein product [Macaca fascicularis]
Length = 359
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLSHSI 80
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 282
Query: 495 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 283 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 341
Query: 545 ------DQAYVLFYK 553
+ Y+LFY+
Sbjct: 342 DISQNSESGYILFYQ 356
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 146/360 (40%), Gaps = 72/360 (20%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL--QELRTRDIPKAGYPTLTAFVGFVSD--FDT 258
GL N+GN C+LNA LQ L P + QE G + A V+ +
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGC-KMCAMEAHVTQSLLHS 110
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
SG D+ +P + S + +QEDA EFL F ++ M
Sbjct: 111 HSG-----------DVMKP--------------SQILTSAFHKHQQEDAHEFLMFTLETM 145
Query: 319 HDELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
H+ L++ Q E TS ED S + DIFGG
Sbjct: 146 HESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGG 172
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
+S +K S T FL + LDI S ++ AL E L G G
Sbjct: 173 LWRSQIKCLHCQGTSDTYDRFLDVPLDISS--AQSVNQALWDTEKSEELRGENAYYCGRC 230
Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
+ A K++ I + K+L+L L RFS S G+ KL + V +P L L + L P+
Sbjct: 231 RQKMPASKTLHIHSAPKVLLLVLKRFS-ASMGN-KLDRKVSYPEFLDL-KPYLSQPTGGP 287
Query: 495 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
Y L A + H G GHY + + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 288 LPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|426232189|ref|XP_004010116.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Ovis aries]
Length = 384
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 54 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 105
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 106 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 153
Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 154 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 196
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 197 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 254
Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 494
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 255 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 307
Query: 495 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 544
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 308 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 366
Query: 545 ------DQAYVLFYK 553
+ Y+LFY+
Sbjct: 367 DISKNSESGYILFYQ 381
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 143/357 (40%), Gaps = 66/357 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
GL N+GN C+LNA LQ L P +L + ++ + A V+ +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 145
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
SG D+ +P + S + +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DVMKP--------------SQILTSAFHKHQQEDAHEFLMFTLETMH 180
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+ L++ +S P++ S + DIFGG +
Sbjct: 181 ESCLQVHRQSDPT--------------------PQDTSPI-----------HDIFGGWWR 209
Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 437
S +K S T PFL + LDI S ++ AL E L G G
Sbjct: 210 SQIKCLHCQGTSHTFDPFLDVPLDISS--AQSVNQALWDTGKSEELLGENAYYCGRCRQK 267
Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 497
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+ Y
Sbjct: 268 MPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPY 324
Query: 498 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 554
L A + H G + GHY + + +W DD VT + VL++ AYVLFY Q
Sbjct: 325 ALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
Length = 1323
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 145/357 (40%), Gaps = 66/357 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L P + L T+ G+ + ++ +
Sbjct: 107 GLFNLGNTCFINSALQCLTYTPPLANYMLSLEHTQSCNYQGFCMMCTMETHINRVLCCAH 166
Query: 262 GSSKKKNI--SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ K + + IG+ F F A QEDA EFL F +D M
Sbjct: 167 DAIKPAFVVHELKRIGKHF---RFGA------------------QEDAHEFLRFTVDAMQ 205
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L +G T+ ++ A T + IFGG L+
Sbjct: 206 QACL---------HGC--------------TILDRSSQATT--------IIHQIFGGFLR 234
Query: 380 SVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
S VK KA S T + FL + LDI + V ++ AL F PE L+G Y+ S
Sbjct: 235 SRVKCLNCKAVSDTYEAFLDIPLDI--KTVSSVTKALEQFVKPEQLDGENCYKCSKC--K 290
Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 495
+V A K I S +L + L RF+ + G K++K V++P L L R + E
Sbjct: 291 KMVPASKRFTIHRSSNVLTISLKRFANFTGG--KINKEVKYPEYLDL-RAYMSQSIGEPL 347
Query: 496 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
Y L A + H G + GHY + + W +DASV VL QAY+LFY
Sbjct: 348 IYALYAVLVHSGVNSHAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLFY 404
>gi|291411125|ref|XP_002721843.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 500
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 146/354 (41%), Gaps = 66/354 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 260
GL N+GN C+LNA LQ L P +L ++ ++ ++ L A F+ +P
Sbjct: 53 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDRCILCAVETHFLWALHSPG 112
Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
D+ +P + + F + RQEDA EFL F +D
Sbjct: 113 ------------DVIQPC-----QVLAAGFHTN---------RQEDAHEFLMFALD---- 142
Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
+LK G +G VGP+ + ++ I GG +S
Sbjct: 143 -VLKAAGLPGLTDG----------------VGPQEDQSPSQ----------QIVGGHWRS 175
Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
++ Q S T+ P+L + LDI + ++E AL+ PE L G T
Sbjct: 176 QIQCLQCQGISETLDPYLEIALDI--KTADSVEQALQHLVQPEELAGENAYHCATCRQKT 233
Query: 440 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 498
A K++ +Q+ K+L+ L RFS + KL V +P L + R + + Y
Sbjct: 234 AASKTLTLQSAGKVLLFVLKRFSEFT--GEKLGGQVHYPECLDM-RPYMSQQNGRPLDYV 290
Query: 499 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 552
L A + H G GHY + + W DDA VTA T+ VL+ AYVLFY
Sbjct: 291 LYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFY 344
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,684,274,029
Number of Sequences: 23463169
Number of extensions: 367977258
Number of successful extensions: 804218
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2111
Number of HSP's successfully gapped in prelim test: 4455
Number of HSP's that attempted gapping in prelim test: 786598
Number of HSP's gapped (non-prelim): 14242
length of query: 555
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 407
effective length of database: 8,886,646,355
effective search space: 3616865066485
effective search space used: 3616865066485
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)