BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008744
(555 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8KPU9|SYR_SYNE7 Arginine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942)
GN=argS PE=3 SV=2
Length = 584
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/555 (48%), Positives = 365/555 (65%), Gaps = 28/555 (5%)
Query: 14 ELEKVFDLALKATV-PNETDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L F AL A+ P PL+ T KFGDYQ N AM L ++ + P+
Sbjct: 7 QLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLG------QPPRA 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVK 128
+ + +++NL +++ E ++AGPGF+N L +++ +Q++ D GI+ +P RV
Sbjct: 61 IAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGIQPVSPPQRV- 119
Query: 129 KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYL 188
+VDFSSPNIAKEMHVGHLRSTIIGDS+AR+LEF EVLR NHVGDWGTQFGMLI +L
Sbjct: 120 --IVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFL 177
Query: 189 FEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
E++P + + I +L FY+++K RFD DP+F+E A+Q VV LQSGE +AW
Sbjct: 178 QEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATARQAWQL 237
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
+C+ SR+EF K+Y RL + LEE+GESFYNPY+P ++++L + GL+ E QGA+ +F+EG
Sbjct: 238 LCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGAQCVFLEGFQ 297
Query: 308 ------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+PLI+ KSDGG+NYA+TDLAAL YRL +++A+ IIYVTD GQ HF VF A+
Sbjct: 298 NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQ 357
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER- 420
RAGWL A + HV FGLV GEDGK+L+TR + VRL DLLDEA +R++ L R
Sbjct: 358 RAGWLPA----AAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRARTDLTTRI 413
Query: 421 -GKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 479
+++ T E +E A+AVG GA KY DL NR +NY FSFD+ML +GNTA YLLYA+
Sbjct: 414 AAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPYLLYAYV 473
Query: 480 RICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
RI I RK G D +L + VL ER+L +L EV++E +LLPN +C YL+
Sbjct: 474 RIQGIARKGGIDFAQLDPVAA-VLTEPTERSLAKQVLQLGEVLDEVARDLLPNRLCSYLF 532
Query: 540 NLSEYFTRFYSNCQV 554
LS+ F +FY C +
Sbjct: 533 ELSQTFNQFYDRCPI 547
>sp|P37880|SYRC_CRIGR Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus GN=RARS
PE=2 SV=1
Length = 661
Score = 523 bits (1348), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/553 (48%), Positives = 368/553 (66%), Gaps = 14/553 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N N+ L+ VF A+KA P+ D PL+ + KFGDYQCN+AMG+ +K K
Sbjct: 72 KNMININSRLQDVFGCAIKAAYPD-LDNPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKE 130
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E I+ +AGPGF+NV L K+++++ + +LV+GI+ P
Sbjct: 131 QKV-NPRGIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGIQL--P 187
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NHVGDWGTQFG
Sbjct: 188 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFG 247
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L ++FP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQS +P +
Sbjct: 248 MLIAHLQDQFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVSLQSKDPDFI 306
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR EF+K+Y L + L E+GESFY + ++ E +G V+ G +++F
Sbjct: 307 KAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGYVQVDDGRKIVF 366
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G +IPL IVKSDGGF Y ++DLAA+ RL EEKA IIYV D GQ +HF +F+AA+
Sbjct: 367 VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAVHFQTIFAAAQM 426
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK 422
GW D + +HVGFG+VLGED K+ +TR E VRLVDLL E RS L E+ +
Sbjct: 427 IGWY---DPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEGLKRSMDKLKEKER 483
Query: 423 DKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
DK TEEEL ++ YG KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA RI
Sbjct: 484 DKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIR 543
Query: 483 SIIRKSGKDIEELKKTG---SLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
SI R + D E L+K +VLDH E LG +L F E++++ L +L + +C+Y+Y
Sbjct: 544 SIARLANVDEEMLQKAARETKIVLDHEKEWKLGRCILRFPEILQKMLDDLFLHTLCDYIY 603
Query: 540 NLSEYFTRFYSNC 552
L+ FT FY +C
Sbjct: 604 ELATTFTEFYDSC 616
>sp|Q5N643|SYR_SYNP6 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=argS PE=3 SV=1
Length = 584
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/555 (48%), Positives = 364/555 (65%), Gaps = 28/555 (5%)
Query: 14 ELEKVFDLALKATV-PNETDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L F AL A+ P PL+ T KFGDYQ N AM L ++ + P+
Sbjct: 7 QLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLG------QPPRA 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVK 128
+ + +++NL +++ E ++AGPGF+N L +++ +Q++ D GI+ +P RV
Sbjct: 61 IAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGIQPVSPPQRV- 119
Query: 129 KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYL 188
+VDFSSPNIAKEMHVGHLRSTIIGDS+AR+LEF EVLR NHVGDWGTQFGMLI +L
Sbjct: 120 --IVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFL 177
Query: 189 FEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
E++P + + I +L FY+++K RFD DP+F+E A+Q VV LQSGE +AW
Sbjct: 178 QEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATARQAWQL 237
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
+C+ SR+EF K+Y RL + LEE+GESFYNPY+P ++++L + GL+ E QGA+ +F+EG
Sbjct: 238 LCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGAQCVFLEGFQ 297
Query: 308 ------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+PLI+ KSDGG+NYA+TDLAAL YRL +++A+ IIYVTD GQ HF VF A+
Sbjct: 298 NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQ 357
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER- 420
RAGWL A + HV FGLV GEDGK+L+TR + VRL DLLDEA +R++ L R
Sbjct: 358 RAGWLPA----AAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRARTDLTTRI 413
Query: 421 -GKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 479
+++ T E +E A+AVG GA KY DL NR +NY FSFD+ML +GNTA YLLYA+
Sbjct: 414 AAEERSETPEFIEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLALQGNTAPYLLYAYV 473
Query: 480 RICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
RI I RK G D +L + L ER+L +L EV++E +LLPN +C YL+
Sbjct: 474 RIQGIARKGGIDFAQLDPVAA-ELTEPTERSLAKQVLQLGEVLDEVARDLLPNRLCSYLF 532
Query: 540 NLSEYFTRFYSNCQV 554
LS+ F +FY C +
Sbjct: 533 ELSQTFNQFYDRCPI 547
>sp|Q6P1S4|SYRC_XENTR Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=rars
PE=2 SV=1
Length = 660
Score = 521 bits (1341), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/548 (47%), Positives = 362/548 (66%), Gaps = 12/548 (2%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKGTEFK 67
N+ +++++F A+ A P E PL + KFGDYQCN+AM + +K +
Sbjct: 75 NINAQIQEIFGTAIGAAYP-ELQNAPLAVTPSQQPKFGDYQCNSAMAITQMLKAMNQKV- 132
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRV 127
P+ + I+KN+P +E++E +AGPGF+NV L K++ +K I K+LV+G++ R
Sbjct: 133 SPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDFTSKQISKLLVNGVQPPVIWER- 191
Query: 128 KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEY 187
KK VVDFSSPNIAKEMHVGHLRST+IGDS+ R+ EF +VLR NH+GDWGTQFGMLI +
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFVGHDVLRLNHLGDWGTQFGMLIAH 251
Query: 188 LFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
L +KFP+ + IG+LQ FY+ SK RFD D FK+RA Q VV+LQ+ P + +AW
Sbjct: 252 LQDKFPDYLTVS-PPIGDLQSFYKESKKRFDEDEEFKKRAYQCVVQLQNKTPNFIQAWNL 310
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
IC++SRKEF K+Y L + + ++GESFY + GV+ E ++GLV+ +G +V+F G +
Sbjct: 311 ICDVSRKEFQKIYDCLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGRKVVFPPGCS 370
Query: 308 IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLS 367
+PL IVKSDGGF Y ++DLAAL RL EEKA+ IIYV D GQ +H VFSA + GW
Sbjct: 371 VPLTIVKSDGGFTYDTSDLAALKQRLQEEKADMIIYVIDSGQAIHMQNVFSAGRMIGWY- 429
Query: 368 ADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWT 427
D + H GFG+VLGED K+ +TR + VRL+DLLDE RS L ++G+DK T
Sbjct: 430 --DPKVTRIEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLDEGLKRSMEKLKDKGRDKVLT 487
Query: 428 EEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRK 487
EEL +V +G KY DL +NR+ +Y FSFD+ML+D+GNTA YLLYA+ RI SI R
Sbjct: 488 AEELLAAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAYTRIRSIARL 547
Query: 488 ---SGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEY 544
S +D+ + K ++L+H E L +L F E++++ L +LL + +C+YLY L+
Sbjct: 548 ANISDEDLHKAAKETEIILEHEKEWKLSKCILRFPEILQKILDDLLLHTLCDYLYELATT 607
Query: 545 FTRFYSNC 552
FT FY NC
Sbjct: 608 FTEFYDNC 615
>sp|A7YW98|SYRC_BOVIN Arginine--tRNA ligase, cytoplasmic OS=Bos taurus GN=RARS PE=2 SV=1
Length = 660
Score = 521 bits (1341), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/549 (48%), Positives = 365/549 (66%), Gaps = 14/549 (2%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKGTEFK 67
N+ LE+VF A+KA P + PLI + KFGDYQCN+AMG+ +K K +
Sbjct: 75 NINSCLEEVFGCAIKAAYP-VLENPPLIVTPSQQPKFGDYQCNSAMGICQMLKTKEQKV- 132
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL-R 126
P+ + + I+K+LP +E IE +AGPGF+N+ L K ++++ + +LV+G++ P +
Sbjct: 133 NPREIAENIVKHLPDNEYIEKVEIAGPGFINIHLRKGFVSQQLTNLLVNGVKI--PSIGE 190
Query: 127 VKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIE 186
KK +VDFSSPNIAKEMHVGHLRSTIIG+S+ R+ EF+ VLR NHVGDWGTQFGMLI
Sbjct: 191 NKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGDWGTQFGMLIA 250
Query: 187 YLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWA 246
+L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQS P +AW
Sbjct: 251 HLQDKFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIKAWK 309
Query: 247 QICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV 306
IC++SR+EF+K+Y+ L + L E+GESFY + ++ E +G V+ G +++F+ G
Sbjct: 310 LICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKEFEDRGFVQVDDGRKIVFVPGC 369
Query: 307 NIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWL 366
++PL IVKSDGG+ Y ++DLAA+ RL EEKA+ IIYV D GQ LHF VF AA+ GW
Sbjct: 370 SVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSLHFQTVFGAAQMIGWY 429
Query: 367 SADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEW 426
D + SH GFG+VLGED K+ +TR E VRL+DLL+E RS L E+ +DK
Sbjct: 430 ---DPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVL 486
Query: 427 TEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIR 486
T EEL+ +V YG KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA RI SI R
Sbjct: 487 TTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIRSIAR 546
Query: 487 KSGKDIEELKKTG---SLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSE 543
+ D E L+K ++LDH E LG +L F EV+++ L +LL + +C+Y+Y L+
Sbjct: 547 LANIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPEVLQKILDDLLLHTLCDYIYELAT 606
Query: 544 YFTRFYSNC 552
FT FY +C
Sbjct: 607 TFTEFYDSC 615
>sp|B0JLI8|SYR_MICAN Arginine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843)
GN=argS PE=3 SV=1
Length = 585
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/539 (49%), Positives = 362/539 (67%), Gaps = 26/539 (4%)
Query: 29 NETDVRPLI-AACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIE 87
N D PLI AA +FGDYQCN ++ L ++K K P+ V ++KNL ++ +
Sbjct: 23 NFADTDPLIVAASNPRFGDYQCNISLSLAKELKQK------PREVAATLLKNLEIDDLCQ 76
Query: 88 SCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVKKAVVDFSSPNIAKEMH 144
+ +AGPGF+N+ L +++ ++ ++ D G+ T P +K +VDFSSPNIAKEMH
Sbjct: 77 TPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPS---QKIIVDFSSPNIAKEMH 133
Query: 145 VGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAI 203
VGHLRSTIIGD +AR+LEF + +V+R NHVGDWGTQFGMLI YL E +P++ A+ +
Sbjct: 134 VGHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDL 193
Query: 204 GELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRL 263
G+L FY+++K RFD D FKE A+QAVV+LQSG+P+ +AW +C+ SR+EF K+Y L
Sbjct: 194 GDLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDIL 253
Query: 264 RVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDG 317
+ L E+GESFYNPY+ VI EL +QGL+ E GA +F++G +PLI+ KSDG
Sbjct: 254 DIKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDG 313
Query: 318 GFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKAS 377
G+NYA+TDLAA+ YR+ E+KAE IIYVTD GQ HF VF AK+AG+L + +
Sbjct: 314 GYNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFLPDNVAVV---- 369
Query: 378 HVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER--GKDKEWTEEELEQTA 435
HV FGLVLGEDGK+L+TR E V+L +LLD+A S A L +R +++E T + + +TA
Sbjct: 370 HVAFGLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTA 429
Query: 436 EAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEEL 495
E VG A KY DL NR +NY FS+D+MLN +GNTA Y+LYA+AR+ SI R+ G + ++L
Sbjct: 430 ETVGLSAVKYADLSQNRHSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDL 489
Query: 496 KKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
SL+L E L LL EVI +LLPN +C+YLY LS+ + RFY NC V
Sbjct: 490 SANSSLILKDESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFYENCPV 548
>sp|Q9D0I9|SYRC_MOUSE Arginine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Rars PE=2
SV=2
Length = 660
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 367/553 (66%), Gaps = 14/553 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N N+ L++VF A++A P+ + PLI + KFGDYQCN+AMG+ +K K
Sbjct: 71 KNMININSRLQEVFGCAIRAAYPD-LENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP ++ I+ +AGPGF+NV L K+++++ + +LV+G++ P
Sbjct: 130 QKV-SPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQL--P 186
Query: 124 KLRVK-KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L K K +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NHVGDWGTQFG
Sbjct: 187 VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD+D FK+RA Q VV LQS P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIM 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+EF K+Y L + L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G ++PL IVKSDGG+ Y ++DLAA+ RL EEKA IIYV D GQ +HF +F+AA+
Sbjct: 366 VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK 422
GW D +HVGFG+VLGED K+ +TR E VRL+DLL+E RS L E+ +
Sbjct: 426 IGWY---DPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKER 482
Query: 423 DKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
DK TEEEL+ +V YG KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA RI
Sbjct: 483 DKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIR 542
Query: 483 SIIRKSGKDIEELKKTG---SLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
SI R + D L++ ++LDH E LG +L F E++++ L +L + +C+Y+Y
Sbjct: 543 SIARLANIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIY 602
Query: 540 NLSEYFTRFYSNC 552
L+ FT FY +C
Sbjct: 603 ELATTFTEFYDSC 615
>sp|P40329|SYRC_RAT Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Rars
PE=1 SV=2
Length = 660
Score = 513 bits (1322), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/553 (47%), Positives = 368/553 (66%), Gaps = 14/553 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N N+ L+++F A+KA P+ + PL+ + KFGDYQCN+AMG+ +K K
Sbjct: 71 KNMININSRLQELFGCAIKAAYPD-LENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E I+ +AGPGF+NV L K+++++ + +LV+G++ P
Sbjct: 130 QKV-SPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQL--P 186
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L +K +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ VLR NHVGDWGTQFG
Sbjct: 187 VLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA + VV LQS P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIM 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+EF+K+Y L + L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G ++PL IVKSDGG+ Y ++DLAA+ RL EEKA IIYV D GQ HF VF+AA+
Sbjct: 366 VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQATHFQTVFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK 422
GW D + +HVGFG+VLGED K+ +TR E VRL+DLL+E RS L E+ +
Sbjct: 426 IGWY---DPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLRRSMDKLKEKER 482
Query: 423 DKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
DK TEEEL+ +V YG KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA RI
Sbjct: 483 DKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYAFTRIR 542
Query: 483 SIIRKSGKDIEELKKTG---SLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
SI R + D E L++ ++LDH E LG +L F E++++ L +L + +C+Y+Y
Sbjct: 543 SIARLANIDEEMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIY 602
Query: 540 NLSEYFTRFYSNC 552
L+ FT FY +C
Sbjct: 603 ELATTFTEFYDSC 615
>sp|Q5RA20|SYRC_PONAB Arginine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=RARS PE=2
SV=1
Length = 660
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/553 (47%), Positives = 365/553 (66%), Gaps = 14/553 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N NV L++VF A+KA P+ + PL+ + AKFGDYQCN+AMG+ +K K
Sbjct: 71 KNMINVISRLQEVFGHAIKAAYPD-LENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E IE +AGPGF+N+ L K+++++ + +LV+G++ P
Sbjct: 130 QKV-NPREIAENITKHLPDNECIEKVEIAGPGFINIHLRKDFVSEQLTSLLVNGVQL--P 186
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NH+GDWGTQFG
Sbjct: 187 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHIGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQ P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDIT 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+E +K+Y L V L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G +IPL I+KSDGG+ Y ++DLAA+ RL EEKA+ IIYV D GQ +HF +F+AA+
Sbjct: 366 VPGCSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK 422
GW D + H GFG+VLGED K+ +TR E VRL+DLL E RS L E+ +
Sbjct: 426 IGWY---DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKER 482
Query: 423 DKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
DK T EEL ++ YG KY DL +NRL +Y FSFD+ML+DKGNTA YLLYA RI
Sbjct: 483 DKVLTAEELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLDDKGNTAAYLLYAFTRIR 542
Query: 483 SIIRKSGKDIEELKKTG---SLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
SI R + D E L+K ++LDH E LG +L F E++++ L +L + +C+Y+Y
Sbjct: 543 SIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIY 602
Query: 540 NLSEYFTRFYSNC 552
L+ FT FY +C
Sbjct: 603 ELATTFTEFYDSC 615
>sp|P54136|SYRC_HUMAN Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=RARS PE=1
SV=2
Length = 660
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/553 (47%), Positives = 365/553 (66%), Gaps = 14/553 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N N+ L++VF A+KA P+ + PL+ + AKFGDYQCN+AMG+ +K K
Sbjct: 71 KNMINIISRLQEVFGHAIKAAYPD-LENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E IE +AGPGF+NV L K+++++ + +LV+G++ P
Sbjct: 130 QKV-NPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQL--P 186
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NHVGDWGTQFG
Sbjct: 187 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQ P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDIT 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+E +K+Y L V L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G +IPL IVKSDGG+ Y ++DLAA+ RL EEKA+ IIYV D GQ +HF +F+AA+
Sbjct: 366 VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK 422
GW D + H GFG+VLGED K+ +TR E VRL+DLL E RS L E+ +
Sbjct: 426 IGWY---DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKER 482
Query: 423 DKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
DK T EEL +V YG KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA RI
Sbjct: 483 DKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTRIR 542
Query: 483 SIIRKSGKDIEELKKTG---SLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
SI R + D E L+K ++LDH E LG +L F E++++ L +L + +C+Y+Y
Sbjct: 543 SIARLANIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIY 602
Query: 540 NLSEYFTRFYSNC 552
L+ FT FY +C
Sbjct: 603 ELATAFTEFYDSC 615
>sp|Q8DKN4|SYR_THEEB Arginine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=argS PE=3 SV=1
Length = 584
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/543 (47%), Positives = 354/543 (65%), Gaps = 20/543 (3%)
Query: 22 ALKATVPNETDVRPL-IAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
AL+A +P +T +PL + A KFGDYQ N + L ++ K P+ + Q ++ +L
Sbjct: 15 ALQAALPLDTYPQPLLVPASQVKFGDYQSNVCLSLAKQLG------KAPRELAQEVVPHL 68
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIA 140
++ + +AGPGF+N L ++A +Q P ++ VVDFSSPNIA
Sbjct: 69 EVEDLCQPVEIAGPGFLNFRLKPEFLAATLQAARGSDRLGIPPAREPRRVVVDFSSPNIA 128
Query: 141 KEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDAN 199
KEMHVGHLRSTIIGD +AR+LEF VLR NHVGDWGTQFGMLI YL E +P++ AN
Sbjct: 129 KEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGTQFGMLIAYLDEVYPDALTTAN 188
Query: 200 ETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKV 259
+G+L FY+++K RFDSDP F+++A+ VV LQ GE + AW +CE SR+EF K+
Sbjct: 189 ALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGEEQSRRAWQLLCEQSRREFQKI 248
Query: 260 YKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIV 313
Y L + L E+GESFYNP++P VI++L+ GL+ E QGA+V+F+EG PLII
Sbjct: 249 YDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGAKVVFLEGFTNKEGQPQPLIIQ 308
Query: 314 KSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTY 373
KSDGG+NYA+TDLAAL YR+++++A+WIIYVTDVGQ HF VF A+RAGW+ +
Sbjct: 309 KSDGGYNYATTDLAALRYRIDKDQADWIIYVTDVGQSTHFAQVFQVAQRAGWVPP----H 364
Query: 374 PKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTE--EEL 431
+HV FGLVLGEDGKRL+TR E +RL+DLL EA RS+A L +R + TE E +
Sbjct: 365 VTLTHVPFGLVLGEDGKRLKTRSGETIRLIDLLTEAIARSRADLEQRLATEGRTESPEFI 424
Query: 432 EQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKD 491
+ A A+G GA KY DL NR +NY FS+D+ML+ +GNTA YLLYA+ R+ + R+ D
Sbjct: 425 DTVARAIGIGAVKYADLSQNRNSNYVFSYDKMLSLQGNTAPYLLYAYVRVQGLTRRGDID 484
Query: 492 IEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSN 551
L L+L+ E+ L HL+ E ++ T LLPN +C+YL+ LS+ F +FY
Sbjct: 485 WCTLSPDSPLLLEDETEQHLAKHLVQLEETLDLVSTELLPNRLCQYLFELSQLFNQFYDR 544
Query: 552 CQV 554
C +
Sbjct: 545 CPI 547
>sp|Q5ZM11|SYRC_CHICK Arginine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=RARS PE=2
SV=1
Length = 661
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/548 (45%), Positives = 362/548 (66%), Gaps = 11/548 (2%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKGTEFK 67
N+ L+++F A++A P E + PL+ + KFGDYQCN+AMG+ + +
Sbjct: 75 NINSRLQEIFGAAIQAAYP-ELENPPLVVTPSQQPKFGDYQCNSAMGITQILLKTKEQKV 133
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRV 127
P+ + + I K++P +E IE +AGPGF+NV L K++++K + +LV+G++ A R
Sbjct: 134 SPREIAEKITKHIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLLVNGVQPPAIGKR- 192
Query: 128 KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEY 187
KK ++DFSSPNIAKEMHVGHLRSTIIG+S+ R+ EF+ +VLR NH+GDWGTQFGMLI +
Sbjct: 193 KKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIAH 252
Query: 188 LFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
L ++FP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQS +P + +AW
Sbjct: 253 LQDRFPDYLTVS-PPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQSKDPDFIKAWEL 311
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
IC++SRKEF K+Y L V L E+GESFY + ++ E +G V+ G +++F+ G +
Sbjct: 312 ICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQVDDGRKIVFVPGFS 371
Query: 308 IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLS 367
+PL I+KSDGG+ Y ++DLAAL +RL EEK + +IYV D GQ +H VF+A + GW
Sbjct: 372 VPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVDSGQSVHLQTVFAAGQMIGWY- 430
Query: 368 ADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWT 427
D + +H FG+VLGED K+ +TR + VRL+DLL+E R+ L ++ +DK T
Sbjct: 431 --DPKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRAMDKLKDKERDKVLT 488
Query: 428 EEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRK 487
EEL+ +V +G KY DL +NRL +Y FSFD+ML+D+GNTA YLLYA RI +I R
Sbjct: 489 PEELKAAQMSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYAFTRIRAIARL 548
Query: 488 SGKDIEELKKTGS---LVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEY 544
+ D L+K +VLDH E LG +L F E++++ L +LL + +C+YLY L+
Sbjct: 549 ANIDEGMLRKAAREEVIVLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLYELATT 608
Query: 545 FTRFYSNC 552
FT FY NC
Sbjct: 609 FTEFYDNC 616
>sp|Q10XL4|SYR_TRIEI Arginine--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101)
GN=argS PE=3 SV=1
Length = 585
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/552 (48%), Positives = 358/552 (64%), Gaps = 21/552 (3%)
Query: 14 ELEKVFDLALKATVPNE-TDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L+ FD AL + P+I + T KFGDYQCN AM L K+K K P+
Sbjct: 7 QLKSRFDKALITAFGQDLVGTDPMIVSTTNPKFGDYQCNVAMSLAKKLKDK------PKA 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAV 131
+ I+ NL ++ +AGPGF+N+ L ++ ++ ++ D +P ++ V
Sbjct: 61 IATQIINNLNINDYFYPPEIAGPGFINLSLKPEYIENCLETIIKDEKLNISPTKNPQRVV 120
Query: 132 VDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEK 191
+DFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI YL E
Sbjct: 121 IDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGDWGTQFGMLISYLREA 180
Query: 192 FPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICE 250
FP + + A+ IG+L FY++SK RFD D F+E+++Q VV LQ+G AW +C
Sbjct: 181 FPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQTGAEDSRHAWELLCN 240
Query: 251 ISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI------E 304
SR+EF +Y L + L E+GESFYN +PG+++EL++ GL+EES GA+ +F+ E
Sbjct: 241 QSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEESDGAQCVFLSGFTNKE 300
Query: 305 GVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAG 364
G ++PLI+ KSDGG+NYA+TDLAAL +R+ +E A +IYVTD GQ HF V+ AK+AG
Sbjct: 301 GEDVPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTDAGQANHFSQVWQVAKKAG 360
Query: 365 WLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDK 424
W+ + + +V FGLVLGEDGK+L+TR E VRL+DLLDEA N+++ L +R KD+
Sbjct: 361 WIPEN----VEIVNVFFGLVLGEDGKKLKTRSGETVRLIDLLDEAINKARNDLEKRLKDE 416
Query: 425 EWTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARIC 482
+ E E ++ A+ VG A KY DL NR +NY FSFD+ML +GNTA YLLYA+ R+
Sbjct: 417 KRLESEEFIKNVAQVVGLSAVKYADLSQNRKSNYVFSFDKMLALQGNTAPYLLYAYVRVQ 476
Query: 483 SIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLS 542
I RK + E+L+K ++L E LG HLL +EV+ LLPN +CEYLY LS
Sbjct: 477 GISRKGEINFEKLRKDAKIILQDEPELVLGKHLLKLNEVLNIVTIELLPNRLCEYLYELS 536
Query: 543 EYFTRFYSNCQV 554
E F +F+ NC V
Sbjct: 537 EKFNKFFENCPV 548
>sp|B8HSK8|SYR_CYAP4 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=argS PE=3 SV=1
Length = 585
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/531 (48%), Positives = 345/531 (64%), Gaps = 25/531 (4%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L+ A KFGDYQ N + L ++ + P+ + I+ +L E E ++AGPG
Sbjct: 31 LVNASHPKFGDYQSNAPLPLAKQLN------QPPRTIASTIVDHLEVGEAWEPPTIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTI 152
F+N L +++A ++ L D GI LRV VVDFSSPNIAKEMHVGHLRSTI
Sbjct: 85 FINFTLKTSYLASQLELRLTDPRLGISAVKLPLRV---VVDFSSPNIAKEMHVGHLRSTI 141
Query: 153 IGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETA-IGELQEFYR 211
IGD LAR+LEF EVLR NHVGDWGTQFGMLI YL E P + A + +G+L FYR
Sbjct: 142 IGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAFYR 201
Query: 212 RSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKG 271
++K RFDSDP F+ A+Q VVRLQSGEP AW +C SR+EF+K+Y L + L E+G
Sbjct: 202 QAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTERG 261
Query: 272 ESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTD 325
ESFYNP +P VI L + GL+ E QGA+ +F+EG PLI+ KSDGG+ YA+TD
Sbjct: 262 ESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYATTD 321
Query: 326 LAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVL 385
LAAL YR+ +++A+WIIYVTD GQ HF VF A+RAGW+ + HV FGLV
Sbjct: 322 LAALRYRIEQDQADWIIYVTDAGQSTHFAQVFQVAQRAGWIP----NRIRLVHVPFGLVQ 377
Query: 386 GEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER--GKDKEWTEEELEQTAEAVGYGAA 443
GEDGK+L+TR + VRL DLLDEA +R++ L+ R + ++ T E ++ A+ VG GA
Sbjct: 378 GEDGKKLKTRSGDTVRLQDLLDEAIDRARNDLVSRLEAEGRQETPEFIDHVAQVVGIGAV 437
Query: 444 KYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVL 503
KY DL NR +NY FS+D+ML+ +GNTA YL+YA+ R+ I RK D+E+L + +L L
Sbjct: 438 KYADLSQNRTSNYVFSYDKMLSLQGNTAPYLIYAYVRVQGISRKGQIDLEQLTEQPTLSL 497
Query: 504 DHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
+E+ L HLL +V+ + +LLPN +C+YL+ LS+ F +FY C +
Sbjct: 498 QEEEEKLLARHLLQLEDVLAQVTEDLLPNRLCQYLFELSQKFNQFYDRCPI 548
>sp|B1XPX8|SYR_SYNP2 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=argS PE=3 SV=1
Length = 585
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/542 (47%), Positives = 358/542 (66%), Gaps = 20/542 (3%)
Query: 23 LKATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLP 81
+KA + D PL+ A KFGDYQ N A+ L +K K P+ + Q+I++ L
Sbjct: 17 IKAFGEDLKDTDPLVVPASNPKFGDYQSNVALSLTKILK------KNPREIAQSIIEALD 70
Query: 82 PSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAK 141
++ E+ ++AGPGF+N L +++A ++++ P +K +VDFSSPNIAK
Sbjct: 71 IADTCENPTIAGPGFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQKVIVDFSSPNIAK 130
Query: 142 EMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANE 200
EMHVGHLRSTIIGDS+AR+LEF +VLR NHVGDWGTQFGMLI YL E +P++ A+
Sbjct: 131 EMHVGHLRSTIIGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADA 190
Query: 201 TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVY 260
IG+L FY+++K RFD D AFKE ++ VV+LQSG+ + +AW +CE SR+EF K+Y
Sbjct: 191 LDIGDLVAFYKKAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIY 250
Query: 261 KRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVK 314
L + L E+GESFYNPY+ V+ L + GL+EE GA+ +F+EG +PLI+ K
Sbjct: 251 DILDIKLTERGESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQK 310
Query: 315 SDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
SDGGFNYA+TDLAA+ YR+ E++A+ IIYVTD GQ HF VF A+RAG+L D
Sbjct: 311 SDGGFNYATTDLAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQVAERAGFLPDD----V 366
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER--GKDKEWTEEELE 432
+ HV FGLV GEDGK+L+TR + ++L DLLDEA NRS+A L +R +++ T + +E
Sbjct: 367 EVVHVPFGLVQGEDGKKLKTRAGDTIKLKDLLDEAVNRSRADLEKRLAEDERQETADFIE 426
Query: 433 QTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI 492
+ ++ VG GA KY DL NR +NY FSFD+ML +GNTA Y+LYA+ R+ + R+ G D+
Sbjct: 427 KVSQVVGIGAVKYADLSQNRTSNYIFSFDKMLALQGNTAPYMLYAYVRVQGVSRQGGIDL 486
Query: 493 EELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNC 552
L ++L+ A E L HLL SEV+ +L+PN +CEYLY+LS F +FY C
Sbjct: 487 STLPTDTPIILEEAAELTLAKHLLQLSEVLMSVEQDLMPNRLCEYLYDLSRKFNQFYEAC 546
Query: 553 QV 554
+
Sbjct: 547 PI 548
>sp|Q9VXN4|SYRC_DROME Probable arginine--tRNA ligase, cytoplasmic OS=Drosophila
melanogaster GN=Aats-arg PE=2 SV=1
Length = 665
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 363/560 (64%), Gaps = 17/560 (3%)
Query: 2 ATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIA---ACTAKFGDYQCNNAMGLWSK 58
++ + + ++ LE VF A+ + P D +IA + +AKFGDYQCNNAMGL K
Sbjct: 70 VSKPKESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSAKFGDYQCNNAMGLSKK 129
Query: 59 IKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGI 118
+K KG K P+ + + + P S +IE +AG GFVNV LSK++ + + +L +G+
Sbjct: 130 LKEKGIN-KAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGV 188
Query: 119 ETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWG 178
+ P++ K+ +VDFSSPNIAK+MHVGHLRSTIIG+SL R+LEF +V+R NH+GDWG
Sbjct: 189 K--PPEVIKKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWG 246
Query: 179 TQFGMLIEYLFEKFPNSEDANETA-IGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSG 237
TQFGMLI +L ++FPN NE+ I +LQ FY+ SK RFD D FK+RA VV LQ G
Sbjct: 247 TQFGMLIAHLEDRFPNY--LNESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKG 304
Query: 238 EPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQG 297
P +AW IC +SRKEF +Y+RL + ++E+GESFY + V++ L +GL+E +G
Sbjct: 305 VPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVVEYLRGKGLLEVDEG 364
Query: 298 ARVIFIEGVN--IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDM 355
+++ + IPL IVKSDGGF Y ++D+AA+ +RL EE +WIIYV D GQ HF+
Sbjct: 365 REIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNT 424
Query: 356 VFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKA 415
+F AA+R+ L + + HV FG+VLGEDGK+ +TR + V+L DLLDE RS
Sbjct: 425 IFKAAERSAIL---NPLSHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQ 481
Query: 416 VLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLL 475
L RG+DK T +EL+ E++ YG KY DL +NR+++Y FSFD+ML D+GNTAVYLL
Sbjct: 482 QLESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLL 541
Query: 476 YAHARICSIIRKSGKD---IEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPN 532
Y + RICSI R SG+D + E+ K ++VLDH E L LL +++ + L +
Sbjct: 542 YTYTRICSIARNSGEDFTNLPEILKKTNIVLDHEKEWKLAKTLLKLHDILIKCSKELFLH 601
Query: 533 VVCEYLYNLSEYFTRFYSNC 552
+CE+ + + FT FY +C
Sbjct: 602 FLCEFCFEVCTVFTEFYDSC 621
>sp|Q3M769|SYR_ANAVT Arginine--tRNA ligase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=argS PE=3 SV=1
Length = 588
Score = 497 bits (1280), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/527 (49%), Positives = 342/527 (64%), Gaps = 19/527 (3%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L+ A KFGDYQ N A+ L K+ + P+ + AI++ L SE+ E+ +AGPG
Sbjct: 31 LVTASNPKFGDYQANVALSLSKKLG------QPPRAIASAIVEKLDVSEICETPEIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGD 155
F+N+ L ++ + + D ++ +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 156 SLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSK 214
S+AR+LEF +VLR NHVGDWGTQFGMLI YL E P + AN IG+L FYR++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 215 NRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESF 274
RFD+D AF+E A+Q VVRLQ+G AW +CE SR+EF +Y L V L E+GESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 275 YNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAA 328
YNP +P V++ L GL+ E+QGA+ +F++G +PLI+ KSDGG+NYA+TDLAA
Sbjct: 265 YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 329 LWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGED 388
L YR+ +++A+ I+YVTD GQ HF F A++AGW+ D + HV FGLVLGED
Sbjct: 325 LRYRIQKDEAKRIVYVTDAGQANHFAQFFQVARKAGWIPND----VELVHVPFGLVLGED 380
Query: 389 GKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK--DKEWTEEELEQTAEAVGYGAAKYF 446
GK+ +TR + VRL DLLDEA +R+ A L ER K ++E T E +++ AE VG A KY
Sbjct: 381 GKKFKTRSGDTVRLRDLLDEAVSRAHADLEERLKAEEREETPEFIDKVAEVVGISAVKYA 440
Query: 447 DLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHA 506
DL NR +NY FS+D+ML+ KGNTA Y+LYA+ARI I RK G + +L ++L H
Sbjct: 441 DLSQNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGGINFADLGDNAKVILQHD 500
Query: 507 DERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQ 553
E AL +LL EVI +LLPN +CEYLY LS+ F FY Q
Sbjct: 501 TEFALAKYLLQLGEVISTVEADLLPNRLCEYLYELSKKFNTFYDRNQ 547
>sp|B1X0N5|SYR_CYAA5 Arginine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=argS
PE=3 SV=1
Length = 585
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/559 (47%), Positives = 365/559 (65%), Gaps = 27/559 (4%)
Query: 10 NVKRELEKVFDLALKATVPNE-TDVRPLI-AACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ +L + F AL + E DV P + A + GDYQ N A+ L K+ K
Sbjct: 3 SINEQLTQKFQDALVKSFGEEFKDVDPQVNLARDLRHGDYQANIALPLAKKLG------K 56
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPK 124
P+ + Q I+ NL + + E+ ++ GPGF+N+ L +++ ++ + + GIE
Sbjct: 57 NPREIAQIIINNLSLNTICENPTIGGPGFINLKLKSSYLETQLKSLYQNQRLGIEKVH-- 114
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
K +VDFSSPNIAKEMHVGHLRSTIIGD +AR LEF EVLR NHVGDWGTQFGML
Sbjct: 115 -NADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYEVLRLNHVGDWGTQFGML 173
Query: 185 IEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I YL E +P++ A+ IG+L FY+++K RFD DP F+E A++AVV+LQSG+ + +
Sbjct: 174 ITYLKEVYPDALTQADVLEIGDLVNFYKQAKKRFDEDPKFQEAAREAVVKLQSGDEESRK 233
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW +C+ SR+EF K+Y RL V L E+GESFYNPY+ VI L +QG++E+ QGA+ +F+
Sbjct: 234 AWQLLCDQSRREFQKIYDRLDVKLIERGESFYNPYLNDVIKALDEQGILEKDQGAQCVFL 293
Query: 304 EGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
EG +PLI+ KSDGG+NYA+TDLAAL YR+ E+KA+ IIYVTD GQ HF VF
Sbjct: 294 EGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRIQEDKAKRIIYVTDAGQSNHFAQVF 353
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
AK+A +L D+ +HV FGLV GEDGK+L+TR E V+L DLLDEA N ++ L
Sbjct: 354 QVAKKANFLP--DTV--DVTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNYARKDL 409
Query: 418 IER--GKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLL 475
R +D++ +E+ + AE VG A KY DL NR+++Y FS+D+ML +GNTA Y+L
Sbjct: 410 ENRLQAEDRKESEDFINHVAETVGISAVKYADLSQNRISDYIFSYDKMLALQGNTAPYML 469
Query: 476 YAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVC 535
YA+ARI SI R+ D E L + ++L E LG +LL +E I+E +LLPN +C
Sbjct: 470 YAYARIQSISREGNIDYENLGENIQILLKEDTEIELGKYLLQLNETIKEVEKSLLPNRLC 529
Query: 536 EYLYNLSEYFTRFYSNCQV 554
+YLY LS+ F RFY NC V
Sbjct: 530 DYLYELSKKFNRFYENCPV 548
>sp|B2J6I0|SYR_NOSP7 Arginine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=argS PE=3 SV=1
Length = 584
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/534 (48%), Positives = 349/534 (65%), Gaps = 32/534 (5%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L++A KFGDYQ N A+ L K+ K P+ + AI++ L SE+ E +AGPG
Sbjct: 31 LVSASNPKFGDYQANVALSLSKKLG------KQPRAIAGAIVEKLDVSEICEPPEIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVDGIETWAPKLRV------KKAVVDFSSPNIAKEMHVGHLR 149
F+N+ L ++ + + D P+L V K+ VDFSSPNIAKEMHVGHLR
Sbjct: 85 FINLKLKTAYLEAQLNDIQAD------PRLGVPAAKTPKRENVDFSSPNIAKEMHVGHLR 138
Query: 150 STIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQE 208
STIIGDS+AR+LEF +VLR NHVGDWGTQFGMLI YL E +P++ AN IG+L
Sbjct: 139 STIIGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVS 198
Query: 209 FYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLE 268
FYR++K RFD+D AF+E A+Q VVRLQ+G AW +CE SR+EF +Y+ L + L
Sbjct: 199 FYRKAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLT 258
Query: 269 EKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYA 322
E+GESFYNP + G++++L K GL+ E+QGA+ +F+EG +PLI+ KSDGG+NYA
Sbjct: 259 ERGESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYA 318
Query: 323 STDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFG 382
+TDLA+L YR+ +++A+ IIYVTD GQ HF F A++AGW+ D + HV FG
Sbjct: 319 TTDLASLRYRIQQDQAKRIIYVTDAGQGNHFAQFFQVARKAGWIPDD----VELVHVPFG 374
Query: 383 LVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER--GKDKEWTEEELEQTAEAVGY 440
LVLGEDGK+ +TR + VRL DLLDEA + + A L R ++++ TEE + + A VG
Sbjct: 375 LVLGEDGKKFKTRSGDTVRLRDLLDEAVSHAHADLKTRLQKEERQETEEFINEVARVVGI 434
Query: 441 GAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGS 500
A KY DL NR +NY FS+D+ML+ KGNTA Y+LY +ARI I RK + +EL +
Sbjct: 435 SAVKYADLSQNRTSNYIFSYDKMLDLKGNTAPYMLYVYARIHGISRKGDINFKELGNN-A 493
Query: 501 LVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
++L H E AL +LL EVI +LLPN +CEYL+ LS+ F +FY C +
Sbjct: 494 VLLQHETELALAKYLLQLDEVISSVEQDLLPNRLCEYLFELSQKFNQFYDRCSI 547
>sp|Q8YQU9|SYR_NOSS1 Arginine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=argS PE=3 SV=1
Length = 588
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/527 (48%), Positives = 340/527 (64%), Gaps = 19/527 (3%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L++A KFGDYQ N A+ L K+ + P+ + AI++ L SE+ E +AGPG
Sbjct: 31 LVSASNPKFGDYQANVALSLSKKLGQQ------PRAIASAIVEKLDVSEICEKPEIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGD 155
F+N+ L ++ + + D ++ +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNTIQADTRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 156 SLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSK 214
S+AR+LEF +VLR NHVGDWGTQFGMLI YL E P + AN IG+L FYR++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 215 NRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESF 274
RFD+D AF+E A+Q VVRLQ+G AW +CE SR+EF +Y L V L E+GESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 275 YNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAA 328
YNP +P V++ L K GL+ E+QGA+ +F++G +PLI+ KSDGG+NYA+TDLAA
Sbjct: 265 YNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 329 LWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGED 388
L YR+ +++A+ IIY+TD GQ HF F A++AGW+ D + HV FGLVLGED
Sbjct: 325 LRYRIQKDEAKRIIYITDAGQANHFAQFFQVARKAGWIPDD----VELVHVPFGLVLGED 380
Query: 389 GKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGK--DKEWTEEELEQTAEAVGYGAAKYF 446
GK+ +TR + VRL DLLDEA +R+ A + R K ++E T E +++ AE VG A KY
Sbjct: 381 GKKFKTRSGDTVRLRDLLDEAISRAHADVEVRLKAEEREETAEFIDKVAEVVGISAVKYA 440
Query: 447 DLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHA 506
DL NR +NY FS+D+ML+ KGNTA Y+LYA+ARI I RK + +L ++L H
Sbjct: 441 DLSQNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRKGEINFADLGDNAKVILQHE 500
Query: 507 DERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQ 553
E AL +LL EVI +L PN +CEYLY LS+ F FY Q
Sbjct: 501 TEFALAKYLLQLGEVISTVEEDLSPNRLCEYLYELSKRFNAFYDRNQ 547
>sp|B7KCT7|SYR_CYAP7 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=argS
PE=3 SV=1
Length = 585
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/555 (46%), Positives = 362/555 (65%), Gaps = 27/555 (4%)
Query: 14 ELEKVFDLALKATVPNE-TDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L+ F ALK + +D+ L+ T KFGDYQ N A+ L +K + P+
Sbjct: 7 QLKTRFIQALKTAFDQDFSDLEGLVVPATNPKFGDYQSNVALSLAKPLK------QPPRT 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVK 128
+ + I+K L S++ E +AG GF+N+ L N++ + K+ D G+E +P RV
Sbjct: 61 IAEQIIKALDISDLCEPPQIAGAGFINLTLKANFLENLLAKIQKDSRLGVEKASPSARV- 119
Query: 129 KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYL 188
+VDFSSPNIAKEMHVGHLRSTI+GD +AR+LEF +VLR NHVGDWGTQFGMLI YL
Sbjct: 120 --IVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLRLNHVGDWGTQFGMLIAYL 177
Query: 189 FEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
E +P + A+ +G+L FY+++K RFD D FKE A++ VV+LQ+G AW
Sbjct: 178 REVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARKEVVKLQAGAKDTRHAWQL 237
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
+C+ SR+EF +Y L V+L E+GESFYNP +P ++ +L ++GL+ E QGA+ +F+EG
Sbjct: 238 LCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEEGLLTEDQGAKCVFLEGFT 297
Query: 308 ------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+PLI+ KSD G+NYA+TDLAAL YR+ E+KAE IIYVTD GQ HF VF AK
Sbjct: 298 NKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIYVTDAGQANHFAQVFQVAK 357
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER- 420
+AG + + + HV FG+V GEDGK+L+TR + ++L DL+DEA ++ L +R
Sbjct: 358 KAGIIPEN----IEVVHVAFGVVKGEDGKKLKTRSGDTIKLKDLIDEAVAYARRDLEKRL 413
Query: 421 -GKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHA 479
D++ +++ + ++ VG A KY DL NR+++Y FS+D+ML +GNTA Y+LYA+A
Sbjct: 414 AEDDRKESKDFINHVSQVVGISAIKYADLSQNRISDYVFSYDKMLALQGNTAPYMLYAYA 473
Query: 480 RICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLY 539
RI SI R+ D E+L + ++L E ALG +LL F+EVIE+ NLLPN +CEYLY
Sbjct: 474 RIQSISREGNIDFEKLDEKAKVILSEETELALGKYLLQFTEVIEDVEINLLPNRLCEYLY 533
Query: 540 NLSEYFTRFYSNCQV 554
LS+ F +FY NC V
Sbjct: 534 ELSKKFNKFYENCPV 548
>sp|Q55486|SYR_SYNY3 Arginine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=argS PE=3 SV=1
Length = 584
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/559 (47%), Positives = 365/559 (65%), Gaps = 28/559 (5%)
Query: 10 NVKRELEKVFDLALKATVPNETDV-RPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ +L F AL+ P++ + PL+ A KFGD+QCN A+ L ++ +
Sbjct: 3 SILTQLNDHFAQALEGQFPSDVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG------Q 56
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPK 124
P+ + I+ + SE+ E ++AGPGF+N+ L +++ + + K+ + G+ +
Sbjct: 57 PPRAIAMEIVDKVNLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQQLGVSLVKGE 116
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
R+ VVDFSSPNIAKEMHVGHLRSTIIGD LAR+LEF +VLR NHVGDWGTQFGML
Sbjct: 117 ERI---VVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDWGTQFGML 173
Query: 185 IEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I YL E +P + A+ IG+L FY+++K RFD D F+E ++QAVV LQ+G+ K +
Sbjct: 174 ITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQAGDAKSIK 233
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW +CE SR+EF +Y L + +EE+GESFYNP++PGV++ L ++ L+ E GA+ +F+
Sbjct: 234 AWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDNGAQCVFL 293
Query: 304 EGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
+G +PLI+ KSDGG+NYA+TDLAAL YRLN + AE IIYVTD GQ HF F
Sbjct: 294 DGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQANHFAQFF 353
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
A++AG L+ D T + HV FGLV GEDGK+L+TR + +RL DLL EA R++ L
Sbjct: 354 QVAEKAGILT--DPT--QVVHVPFGLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRARQDL 409
Query: 418 IER--GKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLL 475
R +++ TEE + A+ VG GA KY DL NR ++Y FSFD+ML +GNTA Y+L
Sbjct: 410 ETRLTAEERSETEEFKTEVAQRVGIGAVKYADLSQNRTSDYVFSFDKMLALQGNTAPYML 469
Query: 476 YAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVC 535
YA+ARI SI R+ G D ++ +G +VL E L +LL F++VIE +LLPN +C
Sbjct: 470 YAYARIQSISREGGIDFAQM-DSGEIVLTEPTELVLAKNLLQFADVIETVEISLLPNRLC 528
Query: 536 EYLYNLSEYFTRFYSNCQV 554
+YLY LS+ F RFY NC V
Sbjct: 529 DYLYELSKVFNRFYENCPV 547
>sp|Q6MEP4|SYR_PARUW Arginine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25)
GN=argS PE=3 SV=1
Length = 584
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/557 (44%), Positives = 355/557 (63%), Gaps = 30/557 (5%)
Query: 15 LEKVFDLALKATVPN----ETDVRPLIAACTA-KFGDYQCNNAMGLWSKIKGKGTEFKGP 69
L +F A P+ + + +P I T KFG YQ N+AM L +K K P
Sbjct: 8 LANLFQQATANAFPDLSVLDPNFQPEITPSTQEKFGHYQFNSAMKLAKLLK------KNP 61
Query: 70 QPVGQAIMK----NLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL 125
+ V +AI+ +LPP IE +AGPGF+N+ S ++++KN+ +L D
Sbjct: 62 RQVAEAIVNQLTDSLPPLSKIE---IAGPGFINMTFSTDFLSKNLDILLRDAHFGIPFPE 118
Query: 126 RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLI 185
+ +K ++DFSSPN+AKEMHVGHLRST+IGDSLAR+ EF V+R NH+GDWGT FGMLI
Sbjct: 119 KPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDWGTAFGMLI 178
Query: 186 EYLFEKFPNSEDANE-TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEA 244
Y+ E+ PN + T + L +YR SK +FD +P FK RAQ VV LQ GE K EA
Sbjct: 179 AYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQGEQKAREA 238
Query: 245 WAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIE 304
W ICEIS+K + ++Y+ L V + ++GESFYNP++P ++ +L K+GLV+ S GA+ IF+E
Sbjct: 239 WQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISDGAKCIFLE 298
Query: 305 GV------NIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFS 358
G N+PL+I KSDGG+NY +TD+AA+++R+ EK + +IY+TD GQ HF M+F
Sbjct: 299 GFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITDAGQATHFQMIFK 358
Query: 359 AAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLI 418
AA++A +L D+T + HV FGLVLG DGK+ RTR E +L+DLL A N + +L
Sbjct: 359 AAEKAKYL---DTTQIRVDHVPFGLVLGTDGKKFRTRSGETEKLIDLLRTAINCADKILS 415
Query: 419 ERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAH 478
E K+ E E E A+++G GA KY DL NR+ +YTFS+D+ML +GNTA +L+YA+
Sbjct: 416 E--KNPEMEESERRHLAKSLGIGAIKYADLSCNRVGDYTFSYDRMLRFEGNTAAFLMYAY 473
Query: 479 ARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYL 538
RI I R+ ++ + + + L+H+ E LGLH+L F E + +LLPN + +YL
Sbjct: 474 VRIAGIKRRLKANLPAVLENTHINLEHSTEIELGLHILRFHETLNLMANDLLPNRLTDYL 533
Query: 539 YNLSEYFTRFYSNCQVQ 555
Y L+E F F+ +C+V+
Sbjct: 534 YTLAEKFNAFFRDCRVE 550
>sp|B7JVP5|SYR_CYAP8 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=argS
PE=3 SV=1
Length = 585
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/559 (45%), Positives = 356/559 (63%), Gaps = 27/559 (4%)
Query: 10 NVKRELEKVFDLAL-KATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ +L F AL KA +D+ P++ A KFGDYQ N A+ L K+ +
Sbjct: 3 SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNPKFGDYQANIALSLAKKLGEQ----- 57
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNI---QKMLVDGIETWAPK 124
P+ + Q I+ NL ++ E ++AGPGF+N+ + ++A + Q G+ P
Sbjct: 58 -PRAIAQKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSSSLGVTKADP- 115
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
++K +VDFSSPNIAKEMHVGHLRSTIIGD +AR+LE +VLR NHVGDWGTQFGML
Sbjct: 116 --IEKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLNHVGDWGTQFGML 173
Query: 185 IEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I YL E +P++ A+ IG+L FY+++K RFD D F+E A+ VV+LQ+G+ +
Sbjct: 174 IAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQVVKLQAGDSQTRH 233
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW +CE SR+EF +Y L +++ E+GESFYNP + +I EL QGL+++ GA+ +F+
Sbjct: 234 AWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGLLKKDAGAQCVFL 293
Query: 304 EGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
+G +PLI+ KSDGG+NYA+TDLAAL YR+ +++AE IIYVTD GQ HF VF
Sbjct: 294 DGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVTDAGQANHFAQVF 353
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
AK+A + + + HV FGLV GEDGK+L+TR ++L DLLDEA ++ L
Sbjct: 354 QVAKKAHIIPKN----VEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDEAVIYARQDL 409
Query: 418 IERGKD--KEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLL 475
+R + ++ +E+ + ++ VG A KY DL NR ++Y FS+D+ML +GNTA Y+L
Sbjct: 410 EKRLAEEGRQESEDFIANVSQVVGISAVKYADLSQNRTSDYIFSYDKMLALQGNTAPYML 469
Query: 476 YAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVC 535
YA+ARI SI R+ D E L++ ++L E LG +LL SEVIEE LLPN +C
Sbjct: 470 YAYARIQSISREGNIDFESLQQEAKIILQEETEIELGKYLLQLSEVIEEVEKTLLPNRLC 529
Query: 536 EYLYNLSEYFTRFYSNCQV 554
+YLY LS+ F RFY NC V
Sbjct: 530 DYLYELSKKFNRFYENCPV 548
>sp|Q7VE03|SYR_PROMA Arginine--tRNA ligase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=argS PE=3 SV=1
Length = 603
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 261/570 (45%), Positives = 348/570 (61%), Gaps = 41/570 (7%)
Query: 11 VKRELEKVFDLALKATVPNETDVRP-LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGP 69
V+R L F A + + P L+AA +FGD+Q N A+ L IK K P
Sbjct: 12 VQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK------KSP 65
Query: 70 QPVGQAIMKNLPPSEMIESCS----VAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL 125
+ + + ++K L +E+ ++ +AGPGF+N+ L + I L D + P +
Sbjct: 66 RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL-LGVPLV 124
Query: 126 -------RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWG 178
++K +VDFSSPNIAKEMHVGHLRSTIIGDS+AR+L + +V+R NHVGDWG
Sbjct: 125 NDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLNHVGDWG 184
Query: 179 TQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSG 237
TQFGMLI +L E P + AN +G L EFY+++K RFD D F++ ++ VV LQ G
Sbjct: 185 TQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEVVNLQRG 244
Query: 238 EPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQG 297
+ +AW +CE SRKEF+K+Y RL++++ E+GESFYNP++ GVID+L++ GL+ E G
Sbjct: 245 NKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGLLVEDDG 304
Query: 298 ARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEK----AEWIIYVTDV 347
A+ +F+ G+N +PLII K+DGGFNYA+TDLAA+ YRL ++ A IIYVTD
Sbjct: 305 AKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRIIYVTDS 364
Query: 348 GQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLD 407
GQ HF VF AKRA WL + + HV FGLV GEDGK+L+TR E VRL DLLD
Sbjct: 365 GQANHFAGVFQVAKRAKWLPSSS----RIEHVPFGLVQGEDGKKLKTRSGETVRLKDLLD 420
Query: 408 EAKNRSKAVLIERGKDKEWTEEE---LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQML 464
EA +R+K + IER ++E +E +E+ + +G A KY DL NR+TNY FSFD+ML
Sbjct: 421 EAISRAK-LDIERRLNEENRKESQAFIEKVSNTIGIAAVKYADLSQNRITNYQFSFDRML 479
Query: 465 NDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEE 524
+GNTA YLLYA RI I RK G + K L E L LL F EVI
Sbjct: 480 ALQGNTAPYLLYAVVRIAGINRKGGDLHSSVNK---LNFSEPQEWRLIRELLKFDEVIIA 536
Query: 525 ALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
LLPN +C YL+ LS+ F RFY V
Sbjct: 537 VEEELLPNRLCNYLFELSQVFNRFYDQIPV 566
>sp|A5GP97|SYR_SYNPW Arginine--tRNA ligase OS=Synechococcus sp. (strain WH7803) GN=argS
PE=3 SV=1
Length = 597
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/542 (47%), Positives = 332/542 (61%), Gaps = 42/542 (7%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP----SEMIESCSV 91
L A +FGD+Q N A+ L +K + P+ + AI+ L +++ +
Sbjct: 38 LAPASKPEFGDFQANGALALAKPLK------QAPRQIATAIVAQLQADPAFTDLCLEPQI 91
Query: 92 AGPGFVNVVLSKNWMAKNI------QKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + +A + Q++ V +E AP VVDFSSPNIAKEMHV
Sbjct: 92 AGPGFINLTVRPERLAAEVSARLGDQRLGVPAVEQAAP------VVVDFSSPNIAKEMHV 145
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED-ANETAIG 204
GHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P++ D A+ +G
Sbjct: 146 GHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLG 205
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L FYR +K RFD D AF+ +++ VV+LQ G+P +AW +C+ SR+EF K+Y RL
Sbjct: 206 DLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLD 265
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ L E+GESFYNP++P VID L L+ GA+ +F+EGV +P+I+ KSDGG
Sbjct: 266 IRLNERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGG 325
Query: 319 FNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YR + + A +IYVTD GQ HF VF A+RAGW+
Sbjct: 326 FNYATTDLAAIRYRFGAAPDGDDARRVIYVTDAGQANHFAGVFQVAQRAGWIPEG----A 381
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEE--LE 432
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R++ L R ++E +E E ++
Sbjct: 382 RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAETDLRSRLNEEERSESEEFIQ 441
Query: 433 QTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI 492
A VG A KY DL NR+TNY FSFD+ML +GNTA YLLYA RI I RK G D+
Sbjct: 442 HVAGTVGLAAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG-DL 500
Query: 493 EELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNC 552
E L TG L E AL LL F VI E LLPN +C YL+ LS+ F RFY
Sbjct: 501 EVL--TGQLQFSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQV 558
Query: 553 QV 554
V
Sbjct: 559 PV 560
>sp|Q7U3V8|SYR_SYNPX Arginine--tRNA ligase OS=Synechococcus sp. (strain WH8102) GN=argS
PE=3 SV=1
Length = 597
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/542 (47%), Positives = 334/542 (61%), Gaps = 42/542 (7%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP-SEMIESC---SV 91
L A +FGD+Q N A+ L +K + P+ + AI++ L S + C +
Sbjct: 38 LAPASKPEFGDFQANGALPLAKPLK------QAPRQIATAIVEQLQADSGFTDLCLEPQI 91
Query: 92 AGPGFVNVVLSKNWMAKNI------QKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + +A + +++ V +E AP VVDFSSPNIAKEMHV
Sbjct: 92 AGPGFINLTIRPERLAAEVSARLGDERLGVPAVEQAAP------VVVDFSSPNIAKEMHV 145
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIG 204
GHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P++ E A+ +G
Sbjct: 146 GHLRSTIIGDSLARVLEFRGHTVLRLNHVGDWGTQFGMLITHLKQVAPDALETADAVDLG 205
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L FYR +K RFD D AF+ +++ VV+LQ G+P +AW +C+ SR+EF K+Y RL
Sbjct: 206 DLVAFYREAKKRFDDDEAFQSTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLD 265
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ L E+GESFYNP++P VID L L+ GA+ +F+EGV +P+I+ KSDGG
Sbjct: 266 IRLNERGESFYNPFLPAVIDGLKAAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGG 325
Query: 319 FNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YR + + A ++YVTD GQ HF VF A+RAGW+ D
Sbjct: 326 FNYATTDLAAIRYRFGAAPDGDGARRVVYVTDAGQANHFAGVFQVAERAGWIP--DGA-- 381
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEE--LE 432
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R++ L R K++E +E E ++
Sbjct: 382 RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEEFIQ 441
Query: 433 QTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI 492
A VG A KY DL NR+TNY FSFD+ML +GNTA YLLYA RI I RK G D+
Sbjct: 442 NVAGTVGLAAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG-DL 500
Query: 493 EELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNC 552
E TG L E AL LL F VI E LLPN +C YL+ LS+ F RFY
Sbjct: 501 E--VSTGQLQFSEPQEWALVRELLKFDSVIAEVEEELLPNRLCSYLFELSQVFNRFYDQV 558
Query: 553 QV 554
V
Sbjct: 559 PV 560
>sp|A5GW85|SYR_SYNR3 Arginine--tRNA ligase OS=Synechococcus sp. (strain RCC307) GN=argS
PE=3 SV=1
Length = 590
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 259/568 (45%), Positives = 346/568 (60%), Gaps = 42/568 (7%)
Query: 11 VKRELEKVFDLALKATVPN-ETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKG 68
+ + LE A++ P + ++ P + A +FGD+Q N A+ L +K +
Sbjct: 4 IAQTLEAQLRAAMQQAFPEADGELNPALGPASKPEFGDFQANGALALAKPLK------QA 57
Query: 69 PQPVGQAIMKNLPP----SEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPK 124
P+ + AI++ L S + E+ +AGPGF+N+ L + +A +++ + D P+
Sbjct: 58 PRQIAAAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD------PR 111
Query: 125 LRVK-------KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDW 177
L V +VDFSSPNIAKEMHVGHLRSTIIGD LAR+LEF +VLR NHVGDW
Sbjct: 112 LGVAAVEQAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDW 171
Query: 178 GTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQS 236
GTQFGMLI +L + P + A+ +G+L FYR +K RFD D AF+ +++ VV+LQ
Sbjct: 172 GTQFGMLITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQG 231
Query: 237 GEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQ 296
G+ +AW +C+ SR+EF K+Y RL + L E+GESFYNP + V+D+L GL+ +
Sbjct: 232 GDATSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDE 291
Query: 297 GARVIFIEGV------NIPLIIVKSDGGFNYASTDLAALWYRLNE--EKAEWIIYVTDVG 348
GA +F+EGV +PLI+ KSDGGFNYA+TDLAA+ YRL + A +IYVTD G
Sbjct: 292 GAGCVFLEGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTDAG 351
Query: 349 QQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDE 408
Q HF VF AKRAGW+ A S HV FGLV G+DGK+L+TR + VRL DLLDE
Sbjct: 352 QAAHFAGVFQVAKRAGWVPAAASL----EHVPFGLVQGDDGKKLKTRAGDTVRLKDLLDE 407
Query: 409 AKNRSKAVLIERGKDKEWTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLND 466
A R++A L R +++E E E ++Q A VG A KY DL NR+TNY FSF++ML
Sbjct: 408 AVERAQADLRRRLEEEERQESESFIDQVATTVGLAAVKYADLSTNRITNYQFSFERMLAL 467
Query: 467 KGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEAL 526
GNTA YLLYA RI I RK G EL + LV + E AL LL VI E
Sbjct: 468 TGNTAPYLLYAVVRISGIARKGGALDGELPE--RLVFEEPQEWALIRQLLQLDAVISEVE 525
Query: 527 TNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
++LLPN +C YL+ LS+ F RFY V
Sbjct: 526 SDLLPNRLCTYLFELSQSFNRFYDQVPV 553
>sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis
elegans GN=rrt-1 PE=2 SV=2
Length = 713
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/562 (43%), Positives = 349/562 (62%), Gaps = 18/562 (3%)
Query: 2 ATEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKI 59
T E+ ++ L+ +F A++ P DV PL+ A T +FGDYQCN+AM + +K+
Sbjct: 120 VTVEDYGSSIFGRLQSLFKKAIEDAFPG-LDV-PLLLAETPNPQFGDYQCNSAMPIAAKL 177
Query: 60 KGKGTEFKGPQPVGQAIMKNLPPS-EMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGI 118
K K P V + I LP + +E V GF+N+ L+ +++ + I + +G+
Sbjct: 178 KANKIN-KRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGV 236
Query: 119 ETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWG 178
+ PKL K+ +VDFSSPNIAKEMHVGHLRSTIIGDS+ R+ E +VLR NH+GDWG
Sbjct: 237 KL--PKLTRKRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWG 294
Query: 179 TQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGE 238
TQFGMLI +L+++FP+ I +LQ FY+ SK RFD D FK+RA + VV+LQS +
Sbjct: 295 TQFGMLIAHLYDRFPDFL-KKLPDISDLQAFYKESKKRFDEDEQFKKRAYEYVVKLQSHD 353
Query: 239 PKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVID--ELSKQGLVEESQ 296
+AW IC++S+K VY L + +++ GESFY + ++ + +K ++ E
Sbjct: 354 GDIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFYQDKMIELVKWVKTNKPDMLREED 413
Query: 297 GARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMV 356
G +++F G +IPL +VKSDGGF Y ++DLAAL YR+ EEK +W IYV D GQ LH + V
Sbjct: 414 GRQIMFPTGCDIPLTVVKSDGGFTYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETV 473
Query: 357 FSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAV 416
++A + GW D + + HV FGLVLG+D K+ +TR E VRL+DLL E R+
Sbjct: 474 YAAGRDFGWY---DESIQRVEHVAFGLVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEK 530
Query: 417 LIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLY 476
LIE+G++ +EE+L +AV +G KY DL + R +Y FSFD+ML D+GNTAVYLLY
Sbjct: 531 LIEKGRETAMSEEQLVAARDAVAFGCVKYADLSHTRTQDYVFSFDRMLEDRGNTAVYLLY 590
Query: 477 AHARICSIIRKSG-KDIEELK---KTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPN 532
A+ RI SI K K+++ +K T +L LDH E L LL S+ + L +L+ +
Sbjct: 591 AYTRIQSIFEKDEVKNVDLVKYIASTPTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLMLH 650
Query: 533 VVCEYLYNLSEYFTRFYSNCQV 554
+C+Y+Y L+ F FY+ C V
Sbjct: 651 QMCDYVYQLATLFHDFYNECYV 672
>sp|Q7V493|SYR_PROMM Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9313)
GN=argS PE=3 SV=1
Length = 612
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/573 (44%), Positives = 345/573 (60%), Gaps = 45/573 (7%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKG 68
++ +++ F A + + T + P +A A +FGD+Q N A+ L +K +
Sbjct: 20 QLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPLK------QP 73
Query: 69 PQPVGQAIMKNLPPSEMIESC--------SVAGPGFVNVVLSKNWMAKNIQKMLVDG--- 117
P+ + AI+ L M+++ +AGPGF+N+ + +A +Q L D
Sbjct: 74 PRQIAAAIVDQL----MVDTAFTAICLTPEIAGPGFINLTVRPECLAAEVQARLADARLG 129
Query: 118 ---IETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHV 174
+E + VVDFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHV
Sbjct: 130 VPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHV 189
Query: 175 GDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVR 233
GDWGTQFGMLI +L + P + E A+ +G+L FYR++K RFD D AF+ +++ VV+
Sbjct: 190 GDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDDEAFQTTSREEVVK 249
Query: 234 LQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVE 293
LQ G+P +AW+ +C+ SR+EF K+Y RL V L E+GESFYN Y+ V+++L+ GL+
Sbjct: 250 LQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLESVVEDLNVSGLLV 309
Query: 294 ESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIY 343
GA+ +F+EGV +P+I+ KSDGGFNYA+TDLAA+ YR + A +IY
Sbjct: 310 SDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIY 369
Query: 344 VTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLV 403
VTD GQ HF VF A+RAGW+ + HV FGLV GEDGK+L+TR + VRL
Sbjct: 370 VTDAGQANHFAGVFQVAQRAGWI----PDAGRLQHVPFGLVQGEDGKKLKTRAGDTVRLR 425
Query: 404 DLLDEAKNRSKAVLIERGKDKEWTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFD 461
+LLDEA R+++ L R +++ E+E +EQ A VG A KY DL NR+TNY FSFD
Sbjct: 426 ELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYADLSQNRITNYQFSFD 485
Query: 462 QMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEV 521
+ML +GNTA YLLYA RI I RK G D++ T L E AL LL F V
Sbjct: 486 RMLALQGNTAPYLLYAVVRIAGIARKGG-DLD--VTTAELQFSETQEWALVRELLKFDAV 542
Query: 522 IEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
I E LLPN +C YL+ LS+ F RFY V
Sbjct: 543 IAEVEEELLPNRLCTYLFELSQVFNRFYDQVPV 575
>sp|A2CDB7|SYR_PROM3 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9303)
GN=argS PE=3 SV=1
Length = 603
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/573 (44%), Positives = 345/573 (60%), Gaps = 45/573 (7%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKG 68
++ +++ F A + + T + P +A A +FGD+Q N A+ L +K +
Sbjct: 11 QLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPLK------QP 64
Query: 69 PQPVGQAIMKNLPPSEMIESC--------SVAGPGFVNVVLSKNWMAKNIQKMLVDG--- 117
P+ + AI+ L M+++ +AGPGF+N+ + +A +Q L D
Sbjct: 65 PRQIAAAIVDQL----MVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQARLADARLG 120
Query: 118 ---IETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHV 174
+E + VVDFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHV
Sbjct: 121 VPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHV 180
Query: 175 GDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVR 233
GDWGTQFGMLI +L + P + E A+ +G+L FYR++K RFD D AF+ +++ VV+
Sbjct: 181 GDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDDEAFQTTSREEVVK 240
Query: 234 LQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVE 293
LQ G+P +AW+ +C+ SR+EF K+Y RL V L E+GESFYN Y+ V+++L+ GL+
Sbjct: 241 LQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLESVVEDLNVSGLLV 300
Query: 294 ESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIY 343
GA+ +F+EGV +P+I+ KSDGGFNYA+TDLAA+ YR + A +IY
Sbjct: 301 SDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIY 360
Query: 344 VTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLV 403
VTD GQ HF VF A+RAGW+ + HV FGLV GEDGK+L+TR + VRL
Sbjct: 361 VTDAGQANHFAGVFQVAQRAGWI----PDAGRLQHVPFGLVQGEDGKKLKTRAGDTVRLR 416
Query: 404 DLLDEAKNRSKAVLIERGKDKEWTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFD 461
+LLDEA R+++ L R +++ E+E +EQ A VG A KY DL NR+TNY FSFD
Sbjct: 417 ELLDEAVERAESDLRRRLQEEGRDEDESFIEQVATTVGLAAVKYADLSQNRITNYQFSFD 476
Query: 462 QMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEV 521
+ML +GNTA YLLYA RI I RK G D++ T L E AL LL F V
Sbjct: 477 RMLALQGNTAPYLLYAVVRIAGIARKGG-DLD--VTTAELQFSETQEWALVRELLKFDAV 533
Query: 522 IEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
I E LLPN +C YL+ LS+ F RFY V
Sbjct: 534 IAEVEEELLPNRLCTYLFELSQVFNRFYDQVPV 566
>sp|Q0I6R7|SYR_SYNS3 Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9311) GN=argS
PE=3 SV=1
Length = 590
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/537 (46%), Positives = 329/537 (61%), Gaps = 32/537 (5%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESC----SV 91
L A +FGD+Q N A+ L +K + P+ + AI++ L + +
Sbjct: 31 LAPANKPEFGDFQANGALPLAKPLK------QAPRLIAGAIVEALQADPAFAALCLEPQI 84
Query: 92 AGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVV-DFSSPNIAKEMHVGHLRS 150
AGPGF+N+ + +A + L D P+++ AVV DFSSPNIAKEMHVGHLRS
Sbjct: 85 AGPGFINLTIRPERLAAEVSARLGDP-RLGVPEVQSDAAVVVDFSSPNIAKEMHVGHLRS 143
Query: 151 TIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED-ANETAIGELQEF 209
TIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P + + A+ +G+L F
Sbjct: 144 TIIGDSLARVLEFRGHRVLRLNHVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAF 203
Query: 210 YRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEE 269
YR +K RFD D AF+ +++ VV+LQ G+P +AW +C+ SR+EF K+Y RL + L E
Sbjct: 204 YREAKKRFDEDEAFQATSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSE 263
Query: 270 KGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYAS 323
+GESFYNPY+ V+ L + L+ GA +F+EGVN +P+I+ KSDGGFNYA+
Sbjct: 264 RGESFYNPYLASVLSGLKEADLLVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYAT 323
Query: 324 TDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHV 379
TDLAA+ YR + + A +IYVTD GQ HF VF AKRA W+ + + HV
Sbjct: 324 TDLAAIRYRFALAPDGDGARRVIYVTDAGQANHFAGVFQVAKRANWI----PEHGRLEHV 379
Query: 380 GFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEE--LEQTAEA 437
FGLV GEDGK+L+TR + VRL DLLDEA R++A L R +++ +E++ +E A
Sbjct: 380 PFGLVQGEDGKKLKTRSGDTVRLRDLLDEAVERAEADLRRRLEEEGRSEDDQFIEHVAGT 439
Query: 438 VGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKK 497
VG A KY DL NR+TNY FSFD+ML +GNTA YLLYA RI I RK G D+E +
Sbjct: 440 VGLAAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG-DLE--AE 496
Query: 498 TGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
G L E +L LL F VI E LLPN +C YL+ LS+ F RFY V
Sbjct: 497 AGMLQFSEPQEWSLVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQVPV 553
>sp|Q3AGU9|SYR_SYNSC Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9605) GN=argS
PE=3 SV=1
Length = 590
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/543 (46%), Positives = 329/543 (60%), Gaps = 44/543 (8%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP----SEMIESCSV 91
L +A +FGD+Q N A+ L +K + P+ + AI++ L +++ +
Sbjct: 31 LASASKQEFGDFQANGALPLAKPLK------QAPRQIATAIVEQLQADPAFTDLCLEPQI 84
Query: 92 AGPGFVNVVLSKNWMAKNI------QKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + +A + +++ V + AP VVDFSSPNIAKEMHV
Sbjct: 85 AGPGFINLTIRPERLAAEVSARLGDERLGVPAVSNAAP------VVVDFSSPNIAKEMHV 138
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED-ANETAIG 204
GHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P + D A+ +G
Sbjct: 139 GHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLG 198
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L FYR +K RFD D AF+ ++ VV+LQ G+P +AW +C+ SR+EF K+Y RL
Sbjct: 199 DLVAFYREAKKRFDDDEAFQSTSRDEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLD 258
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ L E+GESFYNP++P VID L L+ GA+ +F+EGV +P+I+ KSDGG
Sbjct: 259 ILLSERGESFYNPFLPAVIDGLKAAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGG 318
Query: 319 FNYASTDLAALWYRLNE----EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YR + A ++YVTD GQ HF VF A+RAGW+
Sbjct: 319 FNYATTDLAAIRYRFGAAPEGDGARRVVYVTDAGQANHFAGVFQVAERAGWI----PDGA 374
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEE--LE 432
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R++ L R K++E +E E ++
Sbjct: 375 RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEEFIQ 434
Query: 433 QTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI 492
A VG A KY DL NR+TNY FSFD+ML +GNTA YLLYA RI I RK G
Sbjct: 435 HVAGTVGLAAVKYADLSQNRITNYQFSFDRMLALQGNTAPYLLYAVVRIAGIARKGG--- 491
Query: 493 EELKKTGS-LVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSN 551
+L T + L E AL LL F VI E LLPN +C YL+ LS+ F RFY
Sbjct: 492 -DLAATNAQLQFSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFELSQVFNRFYDQ 550
Query: 552 CQV 554
V
Sbjct: 551 VPV 553
>sp|A9BDF0|SYR_PROM4 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9211)
GN=argS PE=3 SV=1
Length = 603
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/542 (45%), Positives = 329/542 (60%), Gaps = 36/542 (6%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSE----MIESCSV 91
L+ A +FGD+Q N A+ L +K K P+ + + I+K L ++ + +
Sbjct: 38 LVPATKPEFGDFQVNGALALSKILK------KAPRKIAEEIIKQLVKNDDFNKLCLKPEI 91
Query: 92 AGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAP---KLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + + + I L D G+ P +K VVDFSSPNIAKEMHV
Sbjct: 92 AGPGFINLTIQNSCLTTEICARLNDDHLGVPIAKPLKTHKSLKPIVVDFSSPNIAKEMHV 151
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIG 204
GHLRSTIIGDS+AR+LEF VLR NHVGDWGTQFGMLI YL P + AN +G
Sbjct: 152 GHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGTQFGMLITYLKLVAPEALTTANAINLG 211
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L +FYR++K FD D F++ +++ VVRLQ+G+P+ +AW +C+ SR EF+K+YKRL
Sbjct: 212 DLVKFYRQAKKLFDEDETFQDASREEVVRLQNGDPQSLKAWQLLCDQSRIEFEKIYKRLD 271
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ + E+GESFYN Y+ VID+L L+ GA+ IF++ + +PLI+ K+DGG
Sbjct: 272 IHITERGESFYNQYLQDVIDDLKSTNLLVTDNGAKCIFLDDITGKDGKPLPLIVQKTDGG 331
Query: 319 FNYASTDLAALWYRLNE----EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YRL + A +IYVTD GQ HF VF A+RA W+ D
Sbjct: 332 FNYATTDLAAIRYRLQAYPQGDGACRLIYVTDAGQASHFFAVFQVARRANWIPND----C 387
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER--GKDKEWTEEELE 432
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R+K L ER + ++ +E +
Sbjct: 388 RIEHVPFGLVQGEDGKKLKTRSGDTVRLKDLLDEAIIRAKNDLEERLNAEGRKEDQEFIN 447
Query: 433 QTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI 492
+ + +G A KY DL NR+TNY FSF++ML +GNTA YLLYA RI I RK G
Sbjct: 448 KVSRVIGIAAVKYADLSQNRITNYQFSFNRMLALQGNTAPYLLYALVRIAGINRKGGSLN 507
Query: 493 EELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNC 552
+ K L + E L LL F EVI + LLPN +C YL+ LS+ F RFY
Sbjct: 508 ATINK---LTFNEPQEWMLARELLKFDEVILQVEEELLPNRLCNYLFELSQVFNRFYDQV 564
Query: 553 QV 554
V
Sbjct: 565 PV 566
>sp|Q31CZ4|SYR_PROM9 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9312)
GN=argS PE=3 SV=1
Length = 604
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/532 (45%), Positives = 332/532 (62%), Gaps = 30/532 (5%)
Query: 44 FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSK 103
FGDYQCN + L K K E + + KN S++ +S +AGPGF+N+ L
Sbjct: 45 FGDYQCNVCLCLSKIYKKKPREI--SEDFVYLLNKNKSISKLCKSLEIAGPGFINIKLKD 102
Query: 104 ----NWMAKNIQ--KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSL 157
N + NIQ + + I+ K +VDFSSPNIAKEMHVGHLRSTIIGDS+
Sbjct: 103 EVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSI 162
Query: 158 ARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNR 216
+R+ E +VLR NHVGDWGTQFGMLI L + + N E+ + I +L EFY+ SK R
Sbjct: 163 SRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLVEFYKASKKR 222
Query: 217 FDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYN 276
FD++ F++R+++ VV+LQSG+ K +AW +C+ SRKEFD++YK L++ ++E+GESFYN
Sbjct: 223 FDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKIKERGESFYN 282
Query: 277 PYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALW 330
P++ VI++L + ++ E QGA+ +F++G+ +PLI+ K DGGFNYA+TDLAA+
Sbjct: 283 PFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNYATTDLAAIR 342
Query: 331 YRLNE----EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLG 386
YR N+ + A IIYVTD GQ HF VF AK+A W+ + HV FGLV G
Sbjct: 343 YRFNKAPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPDK----CQVDHVPFGLVQG 398
Query: 387 EDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEW--TEEELEQTAEAVGYGAAK 444
DGK+L+TR E +RL DLL+EA R+K L++R +D++ TEE + T+ +G GA K
Sbjct: 399 IDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKRLEDEDRYETEEFIANTSRIIGLGAVK 458
Query: 445 YFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSG--KDIEELKKTGSLV 502
Y DL NR+TNY FSFD+ML+ GNTA YLLY RI I RK+ D E+ +
Sbjct: 459 YADLSQNRITNYQFSFDKMLSLNGNTAPYLLYTLVRISGIKRKNDFVYDSEDFQYIN--- 515
Query: 503 LDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
+H E L LL F EVI +L+PN +C YL+ L + F RFY +
Sbjct: 516 YEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQVPI 567
>sp|Q824H4|SYR_CHLCV Arginine--tRNA ligase OS=Chlamydophila caviae (strain GPIC) GN=argS
PE=3 SV=1
Length = 564
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/538 (42%), Positives = 335/538 (62%), Gaps = 27/538 (5%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A + P P I T + FG YQCN+AM L +K P+ + +AI+ ++
Sbjct: 16 ATLSAFPQIDTFSPDITQSTKEHFGHYQCNDAMKLARTLK------MAPRAIAEAIVNHI 69
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKM---LVDGIETWAPKLRVKKAVVDFSSP 137
P E+ S +AG GF+N SK ++ +++ L G PK K V+DFSSP
Sbjct: 70 P-KEIFTSIEIAGAGFINFTFSKEFLNNSLKTFSEELSSGFRVKDPK----KVVIDFSSP 124
Query: 138 NIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED 197
NIAK+MHVGHLRSTIIGD LAR+ F +V R NH+GDWGT FGMLI YL E+ P+ +
Sbjct: 125 NIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWGTAFGMLITYLQEE-PSEDI 183
Query: 198 ANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFD 257
N + +L Y+++ RF D FK+R+Q VV LQ+G+P + W QIC IS + F
Sbjct: 184 EN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDPSALKLWKQICAISERAFQ 240
Query: 258 KVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDG 317
K+Y L + +E++GESFYNP++P +I +L + L+ S A+ +F EG +IPL++ KSDG
Sbjct: 241 KIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAKCVFHEGFSIPLMVQKSDG 300
Query: 318 GFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKAS 377
G+NYA+TDLAA+ YR+N + A+ II VTD+GQ LHF ++ + A AG+L ++ S
Sbjct: 301 GYNYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEATALAAGYLPNKETF----S 356
Query: 378 HVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEA 437
HVGFGLVL +GK+ +TR E ++L +LLD A +++KA L E E ++EE+ A
Sbjct: 357 HVGFGLVLDSEGKKFKTRSGENIKLKELLDTAIDQAKATLKEH--RPEISDEEISSRAPI 414
Query: 438 VGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKK 497
+G A KY DL ++R+++Y FSF++ML +GNTA++LLYA+ RI I R+ G + +L+
Sbjct: 415 LGINAIKYADLSSHRVSDYIFSFEKMLRFEGNTAMFLLYAYVRIQGIKRRLGIETLDLEA 474
Query: 498 TGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
T + + E AL L LL F E I+ L +L P+ + +YLY L+ F F+ +C ++
Sbjct: 475 TPN--IQEPSEEALALALLRFPEAIDLTLKDLCPHFLTDYLYMLTNKFNAFFRDCHIE 530
>sp|Q5L6U4|SYR_CHLAB Arginine--tRNA ligase OS=Chlamydophila abortus (strain S26/3)
GN=argS PE=3 SV=1
Length = 562
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/538 (42%), Positives = 336/538 (62%), Gaps = 27/538 (5%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A+ + P + P I T + FG YQCN+AM L +K P+ + ++I+K +
Sbjct: 14 AILSAFPQIETISPDITQSTKELFGHYQCNDAMKLARTLK------MPPRAIAESIVKQI 67
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSP 137
+ S +AG GF+N SK ++ ++Q + L G PK K V+DFSSP
Sbjct: 68 SKNNF-SSIEIAGAGFINFTFSKEFLNLSLQSYSRDLSSGFRVQDPK----KVVIDFSSP 122
Query: 138 NIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED 197
NIAK+MHVGHLRSTIIGD LAR+ F +VLR NH+GDWGT FGMLI YL E+ +SED
Sbjct: 123 NIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNHIGDWGTAFGMLITYLQEE--SSED 180
Query: 198 ANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFD 257
++ +L Y+++ RF D FK+R+Q VV LQSG+PK + W +ICEIS + F
Sbjct: 181 IE--SLEDLTILYKKAHVRFAEDAEFKKRSQTNVVALQSGDPKARKLWERICEISERAFQ 238
Query: 258 KVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDG 317
K+Y L + +E++GESFYNP++P +I++L K+ L+ S A+ +F EG +IPL++ K DG
Sbjct: 239 KIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITVSDEAKCVFHEGFSIPLMVQKRDG 298
Query: 318 GFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKAS 377
G+NYA+TDLAA+ YR+ ++ A+ II VTD+GQ LHF ++ + A AG+L D S
Sbjct: 299 GYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHFQLLEATALAAGYLPNKDVF----S 354
Query: 378 HVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEA 437
HVGFGLVL +GK+ +TR E ++L +LLD A +++ A L + E ++ E+ + A
Sbjct: 355 HVGFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVATL--KKHRPEMSDAEITERAPV 412
Query: 438 VGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKK 497
+G A KY DL ++R+++Y FSF++ML +GNTA+++LY + RI I R+ G IE+L
Sbjct: 413 LGMNAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFILYGYVRIQGIKRRLG--IEKLSL 470
Query: 498 TGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
+ + E AL L LL F E I+ L L P+ + +YLY L+ F F+ +C ++
Sbjct: 471 ESAANIQEPSEEALALALLRFPEAIDITLKELCPHFLTDYLYMLTNKFHAFFRDCHIE 528
>sp|Q2SMY0|SYR_HAHCH Arginine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396)
GN=argS PE=3 SV=1
Length = 578
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/554 (41%), Positives = 334/554 (60%), Gaps = 23/554 (4%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGP 69
N+++ LE+ AL A E + + +FGDYQ N MG +K P
Sbjct: 2 NLQQLLEQKISAALHAAGAPEGSPAIVKPSGKPQFGDYQANGVMGAAKALK------MNP 55
Query: 70 QPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKK 129
+ + ++ L +M E +AGPGF+N+ LSK+WM+++++++L D T +
Sbjct: 56 RELATKVLDVLDLGDMAEKVEIAGPGFINIFLSKDWMSQSLRQVLADPRLTIPLDSPKQT 115
Query: 130 AVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLF 189
VVD+S+PN+AKEMHVGHLRSTIIGD++ R LEF V+R+NHVGDWGTQFGML+ Y+
Sbjct: 116 VVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVIRQNHVGDWGTQFGMLLAYMN 175
Query: 190 EKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQIC 249
+ ++ + +L+ FYR++K FD DP FK+ A+Q VV+LQSG+ + W
Sbjct: 176 KLKAENQQTLSMELADLENFYRQAKTCFDEDPEFKDSARQYVVKLQSGDQECVSLWKTFI 235
Query: 250 EISRKEFDKVYKRLRVDLEEKG---ESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV 306
+IS + + VY+RL V L ES YN +P VID+L ++GL+ S GA +F++
Sbjct: 236 DISLQHCEDVYERLNVSLTRADVMPESAYNEDLPNVIDDLREKGLLTNSDGAECVFMDEF 295
Query: 307 ------NIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAA 360
+PLI+ KSDGG+ YA+TDLAAL YR KA ++Y D Q LH + V++A
Sbjct: 296 KGKDDETLPLIVKKSDGGYLYATTDLAALRYRERVLKANRVLYFVDARQSLHLNQVYAAG 355
Query: 361 KRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
++AG++S D S H+ FG+VLG DGK +TR V+L DLL EA+ R+ AV+ +
Sbjct: 356 RKAGFVSPDMSL----EHMAFGMVLGADGKPFKTRDGGTVKLADLLTEAQGRAYAVV--K 409
Query: 421 GKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHAR 480
GK+ E EEEL + A VG A KY DL NR ++Y FSFD ML+ +GNTA Y+ YA++R
Sbjct: 410 GKNPEMPEEELNRIAHVVGMAAVKYADLSKNRSSDYIFSFDAMLSLEGNTAPYVQYAYSR 469
Query: 481 ICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYN 540
+ ++ +K ++ L G L L ERAL + LL F+E++ + P+++C YLY+
Sbjct: 470 VVNVFKKG--EVGNLTFEGDLQLAEPIERALAVRLLQFNEILHSVASEGCPHILCGYLYD 527
Query: 541 LSEYFTRFYSNCQV 554
LS+ F FY C V
Sbjct: 528 LSKEFASFYEGCPV 541
>sp|Q3AVY5|SYR_SYNS9 Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9902) GN=argS
PE=3 SV=1
Length = 590
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 257/564 (45%), Positives = 335/564 (59%), Gaps = 32/564 (5%)
Query: 10 NVKRELEKVFDLALKATVPN-ETDVRP-LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ + L+ A++ P+ E + P L AA +FGD+Q N A+ L +K +
Sbjct: 3 SLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPEFGDFQANGALPLAKPLK------Q 56
Query: 68 GPQPVGQAIMKNLPPSEMIES-C---SVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
P+ + AI+ L E + C +AGPGF+N+ + +A+ + L
Sbjct: 57 PPRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARLGTDRLGVPV 116
Query: 124 KLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGM 183
V VVDFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGM
Sbjct: 117 VEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHVGDWGTQFGM 176
Query: 184 LIEYLFEKFPNSED-ANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
LI +L + P + D A+ +G+L FYR +K RFD D F+ ++ VV+LQ G+P
Sbjct: 177 LITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDDFQATSRDEVVKLQGGDPVSL 236
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW +C+ SR+EF K+Y RL + L E+GESFYNPY+P V+D L L+ GA+ +F
Sbjct: 237 KAWGLLCDQSRREFQKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLVTDDGAQCVF 296
Query: 303 IEGVN------IPLIIVKSDGGFNYASTDLAALWYRLNE----EKAEWIIYVTDVGQQLH 352
+EGV +P+I+ K DGGFNYA+TDLAA+ +R + A+ +IYVTD GQ H
Sbjct: 297 LEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIYVTDAGQANH 356
Query: 353 FDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNR 412
F VF A+RAGW+ D + HV FGLV GEDGK+L+TR + VRL DLLDEA R
Sbjct: 357 FAGVFQVAERAGWIP--DGA--RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVER 412
Query: 413 SKAVLIERGKDKEWTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNT 470
S+ L R +++E TE + + A VG A KY DL NRLTNY FSFD+ML +GNT
Sbjct: 413 SEQDLRSRLQEEERTESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRMLALQGNT 472
Query: 471 AVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLL 530
A YLLYA RI I RK G D+ +L E AL LL F VI E LL
Sbjct: 473 APYLLYAVVRIAGIARKGG-DLG--VSNAALQFSEPQEWALVRELLKFDRVIVEVEDELL 529
Query: 531 PNVVCEYLYNLSEYFTRFYSNCQV 554
PN +C YL+ LS+ F RFY V
Sbjct: 530 PNRLCSYLFELSQVFNRFYDQVPV 553
>sp|Q7V396|SYR_PROMP Arginine--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=argS PE=3 SV=1
Length = 603
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/546 (43%), Positives = 334/546 (61%), Gaps = 49/546 (8%)
Query: 39 ACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP----SEMIESCSVAGP 94
A +FGDYQCN + L K P+ + A ++ L S + E+ +AGP
Sbjct: 40 ASKEEFGDYQCNICLVLSKIYKS------NPREIAIAFIETLKENKKISNLCENLEIAGP 93
Query: 95 GFVNVVLSKNWMAKNIQKMLVDGIET--WAPKLRV-----------KKAVVDFSSPNIAK 141
GF+N+ L K+L++ I++ P+ V KK +VDFSSPNIAK
Sbjct: 94 GFINIKLK--------NKVLIEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAK 145
Query: 142 EMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANE 200
EMHVGHLRSTIIGDS++++ EF VLR NH+GDWGTQFGMLI L + + + ++ +
Sbjct: 146 EMHVGHLRSTIIGDSISKIFEFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDR 205
Query: 201 TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVY 260
I +L EFY+ SK RFD++ F++R+++ VV+LQSG+ K EAW +C SRKEFD++Y
Sbjct: 206 IKISDLVEFYKASKKRFDNETEFQKRSREEVVQLQSGDKKSIEAWKLLCNQSRKEFDQIY 265
Query: 261 KRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVK 314
K L + ++E+GESFYNP++ +I++L+ + ++ E QGA+ +F++G+ +PLII K
Sbjct: 266 KTLNIKIKERGESFYNPFLKSIIEDLNYKKILIEDQGAKCVFLDGMTNKEGNPLPLIIQK 325
Query: 315 SDGGFNYASTDLAALWYRLNEE----KAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADD 370
DGGFNYA+TDLAAL YR +E A IIYVTD GQ HF VF AKRA W+ D
Sbjct: 326 KDGGFNYATTDLAALRYRFTKEPYGDNAARIIYVTDHGQSNHFAGVFQVAKRANWIPKD- 384
Query: 371 STYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEE 430
+ +HV FGLV G DGK+L+TR + ++L DLL E+ R+K L++R +++ E +
Sbjct: 385 ---CEVNHVPFGLVQGIDGKKLKTREGDTIKLKDLLSESVKRAKEDLLKRLENESRFEND 441
Query: 431 --LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKS 488
+ T++ +G GA KY DL NR+TNY FSF++ML+ GNTA YLLY RI I RK+
Sbjct: 442 DFVLNTSKVIGIGAVKYADLSQNRITNYQFSFEKMLSLNGNTAPYLLYTLVRISGINRKN 501
Query: 489 GKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRF 548
EE S+ H E L LL F EVI +L+PN +C YL+ L + F RF
Sbjct: 502 NM-TEEAINLESISYSHDLEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCKTFNRF 560
Query: 549 YSNCQV 554
Y +
Sbjct: 561 YDQVPI 566
>sp|Q46HI6|SYR_PROMT Arginine--tRNA ligase OS=Prochlorococcus marinus (strain NATL2A)
GN=argS PE=3 SV=1
Length = 607
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/551 (44%), Positives = 331/551 (60%), Gaps = 50/551 (9%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP-SEMIESCS---V 91
L+ A +FGD+Q N A+ L +IK + P+ + Q I L ++ + C+ +
Sbjct: 38 LVPASKPEFGDFQINCALSLAKEIK------QPPREIAQKIANQLQKDNDFVRMCNPPRI 91
Query: 92 AGPGFVNVVLSKNWMAKNI-------------QKMLVDGIETWAPKLRVKKAVVDFSSPN 138
AGPGF+N+ ++ + I +K D IE RV ++DFSSPN
Sbjct: 92 AGPGFINLSINSKTLISEIHVRLNDKRLGVPLKKFSTDKIEEGKSNNRV---ILDFSSPN 148
Query: 139 IAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFP---NS 195
IAKEMHVGHLRSTIIGDSLAR+LEF EVLR NHVGDWGTQFGMLI +L E P ++
Sbjct: 149 IAKEMHVGHLRSTIIGDSLARILEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHT 208
Query: 196 EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKE 255
+D E I +L FYR++K RFD D F+ +++ VV LQ+G+ + AW +C SRKE
Sbjct: 209 KDVVE--ISDLVNFYRQAKKRFDEDQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKE 266
Query: 256 FDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV------NIP 309
F K+Y RL + L E+GESFYN ++ VI++L + L+ QGA+ IF++G+ P
Sbjct: 267 FQKIYDRLDIKLTERGESFYNKFLVDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQP 326
Query: 310 LIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGW 365
+II KSDGGFNYA+TDLAA+ YRL + + A +IYVTD GQ HF VF AK A W
Sbjct: 327 IIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANW 386
Query: 366 LSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKE 425
+ D + HV FGLV GEDGK+L+TR E +RLVDLLDEA R+K L R +
Sbjct: 387 IPTD----CQIEHVPFGLVQGEDGKKLKTRSGETIRLVDLLDEAIQRAKNDLKNRLNTER 442
Query: 426 WTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICS 483
+E E +++ + VG + KY DL NR++NY FSFD+ML+ +GNTA YLLYA RI
Sbjct: 443 RSENENFIDKVSTTVGIASIKYADLSQNRISNYQFSFDKMLSLQGNTAPYLLYALVRIAG 502
Query: 484 IIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSE 543
I RK G D+ + ++ + + E L LL +I E LLPN +C YL+ LS+
Sbjct: 503 ISRKGG-DLN--VSSHNIQFNESQEWELIRKLLQLDYIIAEVEKELLPNRLCGYLFELSQ 559
Query: 544 YFTRFYSNCQV 554
F RFY +
Sbjct: 560 TFNRFYDQVPI 570
>sp|A2C016|SYR_PROM1 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain NATL1A)
GN=argS PE=3 SV=1
Length = 607
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/551 (44%), Positives = 331/551 (60%), Gaps = 50/551 (9%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP-SEMIESCS---V 91
L+ A +FGD+Q N A+ L +I + P+ + Q I K L ++ + C+ +
Sbjct: 38 LVPASKPEFGDFQINCALSLAKEIN------RPPRDIAQQIAKQLQQDNDFVRICNPPLI 91
Query: 92 AGPGFVNVVLSKNWMAKNI-------------QKMLVDGIETWAPKLRVKKAVVDFSSPN 138
AGPGF+N+ ++ + I +K D IE RV ++DFSSPN
Sbjct: 92 AGPGFINLSINSKTLISEIHFRLNDKRLGVPLKKFNTDKIEEEKSNNRV---IIDFSSPN 148
Query: 139 IAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFP---NS 195
IAKEMHVGHLRSTIIGDSLAR+LEF EVLR NHVGDWGTQFGMLI +L E P ++
Sbjct: 149 IAKEMHVGHLRSTIIGDSLARVLEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHT 208
Query: 196 EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKE 255
+D E I +L FYR++K RFD D F+ +++ VV LQ+G+ + AW +C SRKE
Sbjct: 209 KDVVE--ISDLVNFYRQAKKRFDEDQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKE 266
Query: 256 FDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV------NIP 309
F K+Y RL + L E+GESFYN ++ VI++L + L+ QGA+ IF++G+ P
Sbjct: 267 FQKIYDRLDIKLTERGESFYNKFLVDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQP 326
Query: 310 LIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGW 365
+II KSDGGFNYA+TDLAA+ YRL + + A +IYVTD GQ HF VF AK A W
Sbjct: 327 IIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANW 386
Query: 366 LSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKE 425
+ D + HV FGLV GEDGK+L+TR E +RLVDLLDEA R++ L R +
Sbjct: 387 IPTD----CQIEHVPFGLVQGEDGKKLKTRSGETIRLVDLLDEAIQRARDDLKNRLNTES 442
Query: 426 WTEEE--LEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICS 483
+E E +++ + VG + KY DL NR++NY FSFD+ML+ +GNTA YLLYA RI
Sbjct: 443 RSENENFIDKVSTTVGIASIKYADLSQNRISNYQFSFDKMLSLQGNTAPYLLYALVRIAG 502
Query: 484 IIRKSGKDIEELKKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSE 543
I RK G D+ + ++ + + E L LL +I E LLPN +C YL+ LS+
Sbjct: 503 ISRKGG-DLN--VSSQNIQFNESQEWDLIRKLLQLDSIIAEVEKELLPNRLCGYLFELSQ 559
Query: 544 YFTRFYSNCQV 554
F RFY +
Sbjct: 560 TFNRFYDQVPI 570
>sp|Q3KLP4|SYR_CHLTA Arginine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=argS PE=3 SV=1
Length = 563
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/518 (42%), Positives = 320/518 (61%), Gaps = 32/518 (6%)
Query: 44 FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSK 103
FG YQCN+AM L ++ K P+ + ++I+ ++PP+ S +AG GF+N SK
Sbjct: 38 FGHYQCNDAMKLARVLR------KSPRAIAESIVAHIPPAPF-SSIEIAGAGFINFTFSK 90
Query: 104 NWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARM 160
++A +Q K L +G +P+ K ++DFSSPNIAK+MHVGHLRSTIIGD LAR
Sbjct: 91 EFLASQLQTFSKELANGFRAASPQ----KVIIDFSSPNIAKDMHVGHLRSTIIGDCLARC 146
Query: 161 LEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEF---YRRSKNRF 217
F +VLR NH+GDWGT FGMLI YL ++ ++ AI +L++ Y+++ RF
Sbjct: 147 FSFVGHDVLRLNHIGDWGTAFGMLITYL-------QETSQEAIHQLEDLTALYKKAHARF 199
Query: 218 DSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNP 277
D FK+R+Q VV LQSG+ + W QIC +S K F +Y L V+L +GESFYNP
Sbjct: 200 AEDSEFKKRSQHNVVALQSGDAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNP 259
Query: 278 YIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEK 337
++ V+ +L + LV S GA+ +F E +IPL+I KSDGG+NYA+TD+AA+ YR+ +++
Sbjct: 260 FLAEVVADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQ 319
Query: 338 AEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFS 397
A+ I+ VTD GQ LHF ++ + AG+L + SHVGFGLVL G++ +TR
Sbjct: 320 ADRILIVTDSGQSLHFQLLEATCLAAGYLPSKGIF----SHVGFGLVLDTQGRKFKTRSG 375
Query: 398 EVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYT 457
E ++L +LLD A ++K L + + +EEEL +G A KY DL ++R+ +Y
Sbjct: 376 ENIKLRELLDTAVEKAKESL--KAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYV 433
Query: 458 FSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLH 517
FSF++ML +GNTA+ LLYA+ RI I R+ G +E L + L + E AL L LL
Sbjct: 434 FSFEKMLRFEGNTAMSLLYAYVRIQGIKRRMG--LESLPQEEPLAIHEPAEEALALTLLR 491
Query: 518 FSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
F E+++ L L P+ + +YLY L+ F F+ +C ++
Sbjct: 492 FPEILDLTLRELCPHFLTDYLYALTNKFNAFFRDCHIE 529
>sp|O84460|SYR_CHLTR Arginine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=argS PE=3 SV=1
Length = 563
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/518 (42%), Positives = 319/518 (61%), Gaps = 32/518 (6%)
Query: 44 FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSK 103
FG YQCN+AM L + K P+ + ++I+ ++PP+ S +AG GF+N SK
Sbjct: 38 FGHYQCNDAMKLARVLH------KSPRAIAESIVAHIPPTPF-SSIEIAGAGFINFTFSK 90
Query: 104 NWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARM 160
++A +Q K L +G +P+ K ++DFSSPNIAK+MHVGHLRSTIIGD LAR
Sbjct: 91 EFLASQLQTFSKELANGFRAASPQ----KVIIDFSSPNIAKDMHVGHLRSTIIGDCLARC 146
Query: 161 LEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEF---YRRSKNRF 217
F +VLR NH+GDWGT FGMLI YL ++ ++ AI +L++ Y+++ RF
Sbjct: 147 FSFVGHDVLRLNHIGDWGTAFGMLITYL-------QETSQEAIHQLEDLTALYKKAHARF 199
Query: 218 DSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNP 277
D FK+R+Q VV LQSG+ + W QIC +S K F +Y L V+L +GESFYNP
Sbjct: 200 AEDSEFKKRSQHNVVALQSGDAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNP 259
Query: 278 YIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEK 337
++ V+ +L + LV S GA+ +F E +IPL+I KSDGG+NYA+TD+AA+ YR+ +++
Sbjct: 260 FLAEVVADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQ 319
Query: 338 AEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFS 397
A+ I+ VTD GQ LHF ++ + AG+L + SHVGFGLVL G++ +TR
Sbjct: 320 ADRILIVTDSGQSLHFQLLEATCLAAGYLPSKGIF----SHVGFGLVLDTQGRKFKTRSG 375
Query: 398 EVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYT 457
E ++L +LLD A ++K L + + +EEEL +G A KY DL ++R+ +Y
Sbjct: 376 ENIKLRELLDTAVEKAKESL--KAHRPDISEEELAYQGPILGINAIKYADLSSHRINDYV 433
Query: 458 FSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHLLH 517
FSF++ML +GNTA+ LLYA+ RI I R+ G +E + G L + E AL L LL
Sbjct: 434 FSFEKMLRFEGNTAMSLLYAYVRIQGIKRRMG--LESPPQEGPLAVHEPAEEALALTLLR 491
Query: 518 FSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
F E+++ L L P+ + +YLY L+ F F+ +C ++
Sbjct: 492 FPEILDLTLRELCPHFLTDYLYALTNKFNAFFRDCHIE 529
>sp|Q253D1|SYR_CHLFF Arginine--tRNA ligase OS=Chlamydophila felis (strain Fe/C-56)
GN=argS PE=3 SV=1
Length = 562
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/535 (43%), Positives = 333/535 (62%), Gaps = 21/535 (3%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A + P + P I T + FG YQCN+AM L +K P+ + +AI+ NL
Sbjct: 14 ATLSAFPQVENPSPDITQSTKEHFGHYQCNDAMKLDRTLK------MAPRAIAEAIVNNL 67
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIA 140
P + S VAG GF+N SK ++ + ++ D + K KK V+DFSSPNIA
Sbjct: 68 P-KDNFSSVEVAGAGFINFTFSKEFLKQRLETFSADLSSGFCVK-DPKKIVIDFSSPNIA 125
Query: 141 KEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANE 200
K+MHVGHLRSTIIGD LAR+ F +VLR NH+GDWGT FGMLI YL E+ SED
Sbjct: 126 KDMHVGHLRSTIIGDCLARVFSFVGNDVLRLNHIGDWGTAFGMLITYLQEE--ASEDVGN 183
Query: 201 TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVY 260
+ +L Y+++ RF D FK+R+Q VV LQSG+P W ICEIS + F K+Y
Sbjct: 184 --LEDLTALYKKAHARFAEDVEFKKRSQANVVALQSGDPSALNLWKHICEISERAFQKIY 241
Query: 261 KRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFN 320
L V +E++GESFYNP++P +I +L + L+ S A+ +F EG +IPL++ KSDGG+N
Sbjct: 242 DILGVAIEKRGESFYNPFLPEIIQDLENKKLITVSDNAKCVFHEGFSIPLMVQKSDGGYN 301
Query: 321 YASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVG 380
YA+TDLAA+ YR+ ++ A+ II VTD+GQ LHF ++ + A AG+L D T+ SHVG
Sbjct: 302 YATTDLAAMRYRVEKDHADKIIIVTDMGQSLHFQLLEATALAAGYLR-DKETF---SHVG 357
Query: 381 FGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGY 440
FGLVL +GK+ +TR E ++L +LL+ A +++ A L E E +EEE+ Q A +G
Sbjct: 358 FGLVLDSEGKKFKTRSGENIKLKELLNTAVDQAVATLKEH--RPEMSEEEISQRAPILGI 415
Query: 441 GAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGS 500
A KY DL ++R+++Y FSF++ML +GNTA++LLYA+ RI I R+ +IE+L
Sbjct: 416 NAIKYADLSSHRVSDYVFSFEKMLRFEGNTAMFLLYAYVRIQGIKRR--LNIEKLNLEAV 473
Query: 501 LVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
+ + E AL L LL F E I+ L L P+ + +YLY L+ F F+ +C ++
Sbjct: 474 VNIQEPAEEALALALLRFPEAIDVTLKELCPHFLTDYLYMLTNKFNAFFRDCHIE 528
>sp|Q9PJT8|SYR_CHLMU Arginine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=argS PE=3 SV=1
Length = 563
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/530 (42%), Positives = 318/530 (60%), Gaps = 35/530 (6%)
Query: 32 DVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSV 91
D+ P + FG YQCN+AM L ++ K P+ + + I+ ++P + S +
Sbjct: 29 DITP---STKEHFGHYQCNDAMKLARALR------KSPRAIAEEIVAHIPATPF-SSIEI 78
Query: 92 AGPGFVNVVLSKNWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHL 148
AG GF+N SK ++A +Q + L G +P+ K ++DFSSPNIAK+MHVGHL
Sbjct: 79 AGAGFINFTFSKEFLANQLQIFSQELAKGFPVSSPQ----KVIIDFSSPNIAKDMHVGHL 134
Query: 149 RSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQ- 207
RSTIIGD LAR F +VLR NH+GDWGT FGMLI YL ++ +T I +L+
Sbjct: 135 RSTIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYL-------QETAQTDIHQLEN 187
Query: 208 --EFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRV 265
E Y+++ RF DP FK+R+Q VV LQSG+P+ W QIC +S K F K+Y L V
Sbjct: 188 LTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQALALWKQICAVSEKSFQKIYSILDV 247
Query: 266 DLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTD 325
+L +GESFYNP++ V+ +L + LV S GA+ +F E +IPL+I KSDGG+NYA+TD
Sbjct: 248 ELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKCVFHEEFSIPLMIQKSDGGYNYATTD 307
Query: 326 LAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVL 385
+AA+ YR+ ++ A+ I+ VTD GQ LHF ++ + AG+L SHVGFGLVL
Sbjct: 308 VAAMRYRIQQDHADRILIVTDSGQSLHFQLLEATCLAAGYLPHKGI----FSHVGFGLVL 363
Query: 386 GEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKY 445
G++ +TR E ++L +LLD A ++K L R E +EEEL +G A KY
Sbjct: 364 DTQGRKFKTRSGENIKLQELLDTAIEKAKESL--REHRPEISEEELAYQGPILGINAIKY 421
Query: 446 FDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDH 505
DL +R+ +Y FSF++ML +GNTA+ LLYA+ RI I R+ D L + G L +
Sbjct: 422 ADLSAHRINDYVFSFEKMLRFEGNTAMSLLYAYVRIQGIKRRMKLDT--LPQKGPLSIHE 479
Query: 506 ADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
E L L LL F EV++ L L P+ + +YLY L+ F F+ +C ++
Sbjct: 480 PAEETLALTLLRFPEVLDLTLRELCPHFLTDYLYVLTNKFNAFFRDCHIE 529
>sp|C1DHR7|SYR_AZOVD Arginine--tRNA ligase OS=Azotobacter vinelandii (strain DJ / ATCC
BAA-1303) GN=argS PE=3 SV=1
Length = 579
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/519 (42%), Positives = 323/519 (62%), Gaps = 27/519 (5%)
Query: 45 GDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKN 104
GD+ N AM L K P+ + + ++ LP + +AGPGF+N + +
Sbjct: 41 GDFASNIAMMLAKPAGLK------PRQLAEKLVAALPADASVSKVEIAGPGFLNFFQNSD 94
Query: 105 WMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFS 164
+A+ ++ L D +++ VVD SSPN+AKEMHVGHLRSTIIGD++AR+LEF
Sbjct: 95 ALARRLEVALADERLGVRKHGDLQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVARVLEFL 154
Query: 165 NVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFK 224
V+R+NHVGDWGTQFGML+ +L EK P S E+ + +L++FYR +K RFD AF
Sbjct: 155 GDVVIRQNHVGDWGTQFGMLLAHLEEK-PASA---ESELADLEQFYRAAKKRFDESEAFA 210
Query: 225 ERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEE---KGESFYNPYIPG 281
+RA++ VVRLQ+GEP+ W + IS +VY+RL V L +GES YN +PG
Sbjct: 211 DRARELVVRLQAGEPECLRLWQRFNAISLSHCQEVYERLGVRLTPDDIRGESAYNDELPG 270
Query: 282 VIDELSKQGLVEESQGARVIFI------EGVNIPLIIVKSDGGFNYASTDLAALWYRLNE 335
++ L +GL+ ES+GA+ +F+ EG +P+I+ K+ GG+ YA+TDLA++ YR
Sbjct: 271 IVQALRDKGLLTESEGAQCVFLDEFRNAEGNPLPVIVQKAGGGYLYATTDLASMRYRSQV 330
Query: 336 EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTR 395
KA+ ++Y D Q LHF M F+ A+RAG++ D + H+GFG + G DG+ +TR
Sbjct: 331 LKADRVLYFVDQRQALHFQMTFAVARRAGFVRDDTAL----EHMGFGTMNGADGRPFKTR 386
Query: 396 FSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTN 455
V+L+DLLDEA+ R+ A++ +GK+ E EEEL A AVG GA KY DL +R ++
Sbjct: 387 DGGTVKLIDLLDEAEQRAYALV--KGKNPELPEEELRHIARAVGIGAVKYADLSKHRTSD 444
Query: 456 YTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKTGSLVLDHADERALGLHL 515
Y+F+F+ ML+ +GNTA YLLYA+ R+ S+ RK G++I+E+ GS + E AL L
Sbjct: 445 YSFNFELMLSFEGNTAPYLLYAYTRVASVFRKLGREIDEID--GSPAPEAGQELALAARL 502
Query: 516 LHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
F EV+ LP+++C YLY+L+ F+ FY NC +
Sbjct: 503 AQFGEVLGNVAEKGLPHLLCAYLYDLAGLFSSFYENCPI 541
>sp|Q9Z7Y3|SYR_CHLPN Arginine--tRNA ligase OS=Chlamydia pneumoniae GN=argS PE=3 SV=1
Length = 561
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/540 (42%), Positives = 330/540 (61%), Gaps = 33/540 (6%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A+ PN D P I T + FG YQCN+AM L +K K P+ + +AI+ L
Sbjct: 15 AIAKAFPNLEDWAPEITPSTKEHFGHYQCNDAMKLARVLK------KAPRAIAEAIVAEL 68
Query: 81 P--PSEMIESCSVAGPGFVNVVLSKNWMAKNIQKM---LVDGIETWAPKLRVKKAVVDFS 135
P P +IE +AG GF+N S ++ + ++ L G + PK K ++DFS
Sbjct: 69 PQEPFSLIE---IAGAGFINFTFSPVFLNQQLEHFKDALKLGFQVSQPK----KIIIDFS 121
Query: 136 SPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS 195
SPNIAK+MHVGHLRSTIIGDSLAR+ + +VLR NH+GDWGT FGMLI YL E +
Sbjct: 122 SPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAFGMLITYLQENPCDY 181
Query: 196 EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKE 255
D + +L Y+++ F +D FK+R+QQ VV LQ+ +P+ W +ICE S K
Sbjct: 182 SD-----LEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAIAIWEKICETSEKA 236
Query: 256 FDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKS 315
F K+Y L + +E++GESFYNP++P +I++L K+GL+ S A+ +F E +IP ++ KS
Sbjct: 237 FQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVFHEAFSIPFMVQKS 296
Query: 316 DGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPK 375
DGG+NYA+TDLAA+ YR+ E+ A+ II VTD+GQ LHF ++ + A AG+L
Sbjct: 297 DGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAGYLQPG-----I 351
Query: 376 ASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTA 435
SHVGFGLVL GK+L+TR E V+L +LLD A +++ L R E T+E +++ A
Sbjct: 352 FSHVGFGLVLDPQGKKLKTRSGENVKLRELLDTAIEKAEEAL--REHRPELTDEAIQERA 409
Query: 436 EAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEEL 495
+G A KY DL ++R ++Y FSF++ML +GNTA++LLYA+ RI I R+ G I +L
Sbjct: 410 PVIGINAIKYSDLSSHRTSDYVFSFEKMLRFEGNTAMFLLYAYVRIQGIKRRLG--ISQL 467
Query: 496 KKTGSLVLDHADERALGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQVQ 555
G + E L L LL F E +E + L P+ + +YLYNL+ F F+ + +Q
Sbjct: 468 SLEGPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDSHIQ 527
>sp|A1S2P7|SYR_SHEAM Arginine--tRNA ligase OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=argS PE=3 SV=1
Length = 581
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/559 (41%), Positives = 332/559 (59%), Gaps = 35/559 (6%)
Query: 11 VKRELEKVFD-LALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKG 68
++ LE+ + L + VP + + R + K GD N AM + +K+ GK
Sbjct: 5 IQSLLEQTLESLKAQGIVPADFEARIQVDRTKDKSHGDLATNLAM-MLTKVAGKP----- 58
Query: 69 PQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKL 125
P+ + Q I+ NLP S + +AGPGF+N + N +A ++ L D G++ AP+
Sbjct: 59 PREMAQLIIDNLPASAQVAKVEIAGPGFINFFIDDNALANQLKAALGDAMLGVKAAAPQ- 117
Query: 126 RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLI 185
VVD+SSPN+AKEMHVGHLRSTIIGDS+ R LEF +V+R+NHVGDWGTQFGML+
Sbjct: 118 ---TVVVDYSSPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGMLL 174
Query: 186 EYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAW 245
Y+ E +D + +L+ FYR +K RFD F RA+Q VV LQSG+ ++ W
Sbjct: 175 AYMEELRAQGDDKANLELSDLESFYRAAKLRFDESDEFATRARQLVVELQSGDAYCNKLW 234
Query: 246 AQICEISRKEFDKVYKRLRVDLEEK---GESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+ +IS VY RL V L K GES YN + V+ +L +GL+ S GA+V+F
Sbjct: 235 REFNDISLSHCHDVYARLGVSLTRKDVHGESAYNADLAQVVADLDAKGLLAISDGAKVVF 294
Query: 303 IE------GVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMV 356
E G +P+II K+DGGF YA+TDLAA+ YR A+ ++Y D+ Q LHF V
Sbjct: 295 QEEFRNKDGEPLPVIIQKADGGFLYATTDLAAMRYRSGVLNADRVLYFVDLRQALHFQQV 354
Query: 357 FSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAV 416
FS A+ AG++ D+ T H+GFG + GEDG+ +TR VV+LVDLLDEA R++ +
Sbjct: 355 FSLARTAGFVR-DNMTL---EHMGFGTMNGEDGRPFKTRSGGVVKLVDLLDEAVERAEQL 410
Query: 417 LIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNNRLTNYTFSFDQMLNDKGNTAVYLLY 476
+ R K+ + E E+++ A VG + KY DL NR ++Y FSF+QML+ +GNTA YLLY
Sbjct: 411 V--RSKNPDMDETEVKEIARVVGIASVKYADLSKNRSSDYIFSFEQMLSFEGNTAPYLLY 468
Query: 477 AHARICSIIRKSGKDIEELKKTGS-LVLDHADERALGLHLLHFSEVIEEALTNLLPNVVC 535
A+ R+ I +K+ E + T + LVLDH E+ LG L F E++ + P+++C
Sbjct: 469 AYTRVAGIFKKA----ENIDLTNAELVLDHDKEKELGNKLAQFGEILARMVDKGQPHILC 524
Query: 536 EYLYNLSEYFTRFYSNCQV 554
YLY L+ F+ FY C V
Sbjct: 525 GYLYELAGAFSSFYEACPV 543
>sp|Q8E9Y7|SYR_SHEON Arginine--tRNA ligase OS=Shewanella oneidensis (strain MR-1)
GN=argS PE=3 SV=1
Length = 581
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/524 (43%), Positives = 321/524 (61%), Gaps = 35/524 (6%)
Query: 45 GDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKN 104
GD N AM + +K GK P+ + Q I+ NLP S + +AGPGF+N + +
Sbjct: 41 GDLATNVAM-MLTKAAGKN-----PRELAQLIIDNLPASAYVAKVEIAGPGFINFFIDDS 94
Query: 105 WMAKNIQKMLVD---GIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARML 161
+A +Q + D GI+ AP+ VVD+SSPN+AKEMHVGHLRSTIIGDS+ R L
Sbjct: 95 ALANQLQAAIGDEHLGIKLPAPQ----TVVVDYSSPNLAKEMHVGHLRSTIIGDSVVRTL 150
Query: 162 EFSNVEVLRRNHVGDWGTQFGMLIEYLFE-KFPNSEDANETAIGELQEFYRRSKNRFDSD 220
EF +V+R+NHVGDWGTQFGML+ Y+ E + N E A + + +L+ FYR +K RFD
Sbjct: 151 EFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQA-QLELSDLETFYRAAKLRFDES 209
Query: 221 PAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDL---EEKGESFYNP 277
F RA+Q VV LQSG+ ++ W + +IS +VY+RL V L + GES YN
Sbjct: 210 AEFATRARQLVVALQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGESAYNA 269
Query: 278 YIPGVIDELSKQGLVEESQGARVIFI------EGVNIPLIIVKSDGGFNYASTDLAALWY 331
+ V+++L+ +GL+ ES GA+V+F EG +P+II K+DGG+ YA+TDLAA+ Y
Sbjct: 270 DLEQVVNDLAAKGLLTESNGAKVVFQEEFRTKEGEPLPVIIQKADGGYLYATTDLAAMRY 329
Query: 332 RLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKR 391
R N KA+ ++Y D+ Q LHF VFS AK A ++ D S H+GFG + GEDG+
Sbjct: 330 RSNVLKADRVLYFVDLRQALHFQQVFSLAKLAKFVREDMSL----EHLGFGTMNGEDGRP 385
Query: 392 LRTRFSEVVRLVDLLDEAKNRSKAVLIERGKDKEWTEEELEQTAEAVGYGAAKYFDLKNN 451
+TR VV+LVDLLDEA R A+ + R K+ + E L + A VG A KY DL N
Sbjct: 386 FKTRTGGVVKLVDLLDEANTR--ALELVRSKNPDMDEATLAEIARVVGISAVKYADLSKN 443
Query: 452 RLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGK-DIEELKKTGSLVLDHADERA 510
R ++Y FSF+QML+ +GNTA YLLYA+ R+ I +++ D+ + K +VL+H E+
Sbjct: 444 RTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRATDVDLSQAK----IVLEHEKEKD 499
Query: 511 LGLHLLHFSEVIEEALTNLLPNVVCEYLYNLSEYFTRFYSNCQV 554
LG L F E++ + P+V+C YLY L+ F+ FY C V
Sbjct: 500 LGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEACPV 543
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,683,962
Number of Sequences: 539616
Number of extensions: 9297469
Number of successful extensions: 31496
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 27419
Number of HSP's gapped (non-prelim): 1189
length of query: 555
length of database: 191,569,459
effective HSP length: 123
effective length of query: 432
effective length of database: 125,196,691
effective search space: 54084970512
effective search space used: 54084970512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)