Query 008747
Match_columns 555
No_of_seqs 265 out of 2576
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 10:47:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe2_A CPR, P450R, NADPH--cyto 100.0 4E-104 1E-108 878.0 60.5 537 2-555 73-617 (618)
2 2bpo_A CPR, P450R, NADPH-cytoc 100.0 6.7E-98 2E-102 836.4 54.1 533 1-555 100-682 (682)
3 1tll_A Nitric-oxide synthase, 100.0 3.8E-95 1.3E-99 814.1 51.6 536 2-555 60-654 (688)
4 3qfs_A CPR, P450R, NADPH--cyto 100.0 2.3E-84 7.8E-89 691.8 50.2 429 119-555 21-457 (458)
5 2qtl_A MSR;, methionine syntha 100.0 1E-79 3.5E-84 669.6 43.8 407 146-555 105-538 (539)
6 4dql_A Bifunctional P-450/NADP 100.0 3.6E-78 1.2E-82 635.5 41.0 382 154-555 5-391 (393)
7 1f20_A Nitric-oxide synthase; 100.0 9.1E-76 3.1E-80 626.0 42.3 396 150-555 25-433 (435)
8 1ddg_A Sulfite reductase (NADP 100.0 7.9E-74 2.7E-78 599.6 39.6 368 149-555 5-374 (374)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 9.7E-37 3.3E-41 312.5 26.5 271 151-555 33-314 (314)
10 2bmw_A Ferredoxin--NADP reduct 100.0 3E-36 1E-40 307.4 28.7 272 151-555 17-304 (304)
11 2b5o_A FNR, ferredoxin--NADP r 100.0 5.1E-35 1.7E-39 309.2 27.5 273 150-555 117-402 (402)
12 3vo2_A Putative uncharacterize 100.0 3.8E-35 1.3E-39 300.1 17.9 226 318-555 67-310 (310)
13 2rc5_A Ferredoxin-NADP reducta 100.0 8.7E-34 3E-38 290.5 24.7 276 152-555 18-314 (314)
14 3lo8_A Ferredoxin--NADP reduct 100.0 8.3E-34 2.8E-38 290.2 16.6 227 317-555 61-311 (311)
15 3jqq_A Ferredoxin NADP reducta 100.0 9.8E-32 3.3E-36 275.4 23.6 290 150-555 10-316 (316)
16 1tvc_A Methane monooxygenase c 99.9 1.4E-24 4.7E-29 214.8 13.3 183 317-525 44-232 (250)
17 3hr4_A Nitric oxide synthase, 99.9 3.2E-24 1.1E-28 205.8 11.0 102 2-106 89-190 (219)
18 1qfj_A Protein (flavin reducta 99.9 1.8E-24 6.3E-29 211.3 8.6 181 317-524 30-216 (232)
19 2r6h_A NADH:ubiquinone oxidore 99.9 1.1E-23 3.7E-28 212.8 12.5 182 329-525 83-277 (290)
20 1fdr_A Flavodoxin reductase; f 99.9 2.4E-24 8.1E-29 212.7 6.0 188 316-526 30-230 (248)
21 1krh_A Benzoate 1,2-dioxygenas 99.9 1.2E-23 4.1E-28 217.4 11.2 180 317-525 139-323 (338)
22 4eh1_A Flavohemoprotein; struc 99.9 1.2E-23 4.3E-28 206.7 9.5 182 317-526 34-224 (243)
23 2eix_A NADH-cytochrome B5 redu 99.9 2.3E-23 7.9E-28 204.9 11.1 168 331-525 59-233 (243)
24 1gvh_A Flavohemoprotein; oxido 99.9 5E-23 1.7E-27 217.3 12.6 181 316-525 182-378 (396)
25 4fk8_A Ferredoxin--NADP reduct 99.9 1.7E-24 5.7E-29 216.7 0.8 202 317-555 47-268 (271)
26 1umk_A B5R, NADH-cytochrome B5 99.9 2.7E-23 9.3E-28 208.3 8.9 178 331-526 64-266 (275)
27 1ep3_B Dihydroorotate dehydrog 99.9 3.8E-23 1.3E-27 205.9 6.5 170 318-524 35-211 (262)
28 4g1v_A Flavohemoglobin; three 99.9 4.5E-22 1.5E-26 210.2 15.0 170 330-525 204-378 (399)
29 2bgi_A Ferredoxin-NADP(H) redu 99.9 3.5E-23 1.2E-27 207.4 6.0 184 317-525 44-248 (272)
30 2qdx_A Ferredoxin reductase; o 99.9 2.9E-23 1E-27 206.1 4.8 184 317-525 31-234 (257)
31 1cqx_A Flavohemoprotein; globi 99.9 5.2E-22 1.8E-26 210.0 12.6 171 330-525 203-384 (403)
32 2cnd_A NADH-dependent nitrate 99.9 3.4E-22 1.1E-26 199.7 8.3 176 331-524 60-258 (270)
33 2pia_A Phthalate dioxygenase r 99.8 9.4E-22 3.2E-26 201.7 6.9 173 317-524 39-214 (321)
34 1bvy_F Protein (cytochrome P45 99.7 2.5E-18 8.7E-23 162.5 10.2 97 2-101 70-167 (191)
35 2gpj_A Siderophore-interacting 99.6 2.6E-17 9E-22 162.7 3.1 166 318-523 40-211 (252)
36 1ykg_A SIR-FP, sulfite reducta 99.6 3.4E-16 1.2E-20 144.9 9.5 100 1-104 58-157 (167)
37 2hna_A Protein MIOC, flavodoxi 99.6 5.4E-17 1.9E-21 146.9 1.6 96 2-100 49-146 (147)
38 3a1f_A Cytochrome B-245 heavy 99.6 1.6E-16 5.6E-21 148.9 4.6 132 393-526 6-170 (186)
39 3lyu_A Putative hydrogenase; t 99.6 1E-15 3.4E-20 137.8 6.7 118 389-526 4-131 (142)
40 3lrx_A Putative hydrogenase; a 99.6 6E-16 2E-20 141.9 5.2 120 389-526 9-136 (158)
41 3f6r_A Flavodoxin; FMN binding 99.4 7.1E-14 2.4E-18 126.3 6.1 94 1-99 51-147 (148)
42 1f4p_A Flavodoxin; electron tr 99.3 1.8E-12 6E-17 116.9 6.5 94 1-99 50-146 (147)
43 2wc1_A Flavodoxin; electron tr 99.3 2.8E-12 9.5E-17 120.1 7.1 99 1-104 49-180 (182)
44 1yob_A Flavodoxin 2, flavodoxi 99.3 4.6E-12 1.6E-16 118.3 8.2 96 1-101 48-176 (179)
45 2fcr_A Flavodoxin; electron tr 99.2 1.6E-11 5.6E-16 113.9 9.2 95 1-100 47-171 (173)
46 1ag9_A Flavodoxin; electron tr 99.2 1.2E-11 4.3E-16 114.9 6.3 97 1-102 47-169 (175)
47 2bmv_A Flavodoxin; electron tr 99.1 1.2E-11 4.3E-16 113.6 2.3 93 1-100 46-163 (164)
48 1obo_A Flavodoxin; electron tr 99.1 1E-10 3.5E-15 107.8 7.3 96 1-101 48-168 (169)
49 2xod_A NRDI protein, NRDI; fla 99.1 4.3E-11 1.5E-15 104.0 4.4 82 2-97 35-117 (119)
50 1czn_A Flavodoxin; FMN binding 99.1 1E-10 3.5E-15 107.8 6.5 95 1-100 48-167 (169)
51 1rlj_A NRDI protein; flavoprot 99.0 5.9E-10 2E-14 99.4 6.0 84 2-99 46-130 (139)
52 5nul_A Flavodoxin; electron tr 98.7 2.5E-08 8.7E-13 88.4 9.0 86 1-96 47-135 (138)
53 3n3a_C Protein NRDI; ribonucle 98.5 8.2E-08 2.8E-12 85.8 4.9 82 2-98 61-150 (153)
54 2fz5_A Flavodoxin; alpha/beta 98.2 1.9E-06 6.3E-11 75.8 7.7 87 1-97 48-135 (137)
55 3fni_A Putative diflavin flavo 98.1 2E-06 6.8E-11 78.3 5.1 90 2-103 59-150 (159)
56 3hly_A Flavodoxin-like domain; 98.1 3.4E-06 1.2E-10 76.8 6.6 90 1-102 53-144 (161)
57 1ycg_A Nitric oxide reductase; 97.5 0.00011 3.7E-09 76.5 6.3 89 1-99 304-395 (398)
58 1e5d_A Rubredoxin\:oxygen oxid 97.4 0.00019 6.5E-09 74.7 7.7 91 2-102 306-398 (402)
59 2ohh_A Type A flavoprotein FPR 96.8 0.00085 2.9E-08 69.8 5.1 92 1-100 309-402 (404)
60 2a5l_A Trp repressor binding p 96.7 0.0056 1.9E-07 56.9 9.0 72 1-74 73-144 (200)
61 2q9u_A A-type flavoprotein; fl 96.5 0.0052 1.8E-07 64.1 8.8 92 1-102 309-405 (414)
62 3d7n_A Flavodoxin, WRBA-like p 96.1 0.0086 2.9E-07 55.6 6.7 71 1-73 56-126 (193)
63 2ark_A Flavodoxin; FMN, struct 96.0 0.023 8E-07 52.3 9.0 69 1-73 54-123 (188)
64 3klb_A Putative flavoprotein; 96.0 0.015 5E-07 52.5 7.4 80 1-96 80-160 (162)
65 4ici_A Putative flavoprotein; 95.8 0.025 8.6E-07 51.5 8.3 79 1-96 89-168 (171)
66 2vzf_A NADH-dependent FMN redu 95.7 0.0095 3.2E-07 55.5 5.2 67 1-74 71-137 (197)
67 3b6i_A Flavoprotein WRBA; flav 95.6 0.018 6.1E-07 53.3 6.6 71 1-74 70-140 (198)
68 2zki_A 199AA long hypothetical 95.5 0.022 7.5E-07 52.8 6.9 72 1-74 72-143 (199)
69 1t5b_A Acyl carrier protein ph 95.4 0.029 1E-06 51.8 7.2 100 1-102 88-197 (201)
70 1ydg_A Trp repressor binding p 95.1 0.033 1.1E-06 52.2 6.8 72 1-74 80-151 (211)
71 4dik_A Flavoprotein; TM0755, e 94.8 0.035 1.2E-06 58.0 6.5 82 2-94 322-403 (410)
72 3gfs_A FMN-dependent NADPH-azo 94.8 0.043 1.5E-06 49.8 6.4 65 1-73 65-130 (174)
73 1rtt_A Conserved hypothetical 93.7 0.24 8.3E-06 45.5 9.1 70 1-74 74-143 (193)
74 1t0i_A YLR011WP; FMN binding p 93.6 0.18 6E-06 46.3 8.0 64 1-74 86-149 (191)
75 1sqs_A Conserved hypothetical 92.2 0.27 9.3E-06 47.0 7.2 98 1-102 81-179 (242)
76 3k1y_A Oxidoreductase; structu 91.9 0.32 1.1E-05 44.9 7.2 66 1-73 87-152 (191)
77 3edo_A Flavoprotein, putative 91.7 0.26 8.7E-06 43.5 6.0 55 1-66 78-132 (151)
78 4hs4_A Chromate reductase; tri 90.7 0.71 2.4E-05 42.8 8.2 69 1-73 75-143 (199)
79 3lcm_A SMU.1420, putative oxid 90.5 0.51 1.7E-05 43.6 7.0 103 1-104 75-189 (196)
80 2hpv_A FMN-dependent NADH-azor 89.3 0.97 3.3E-05 41.8 8.0 99 1-101 96-202 (208)
81 3fvw_A Putative NAD(P)H-depend 89.3 1.5 5.1E-05 40.2 9.2 70 1-73 69-143 (192)
82 3svl_A Protein YIEF; E. coli C 89.0 1.5 5E-05 40.4 8.9 69 1-73 74-142 (193)
83 3ha2_A NADPH-quinone reductase 88.5 2.5 8.4E-05 38.4 9.9 102 1-103 53-167 (177)
84 2q62_A ARSH; alpha/beta, flavo 88.5 1.7 5.8E-05 41.8 9.2 70 1-73 100-169 (247)
85 3u7r_A NADPH-dependent FMN red 87.9 4.7 0.00016 37.0 11.4 70 1-73 69-138 (190)
86 1rli_A Trp repressor binding p 87.6 1.6 5.6E-05 39.1 8.2 72 1-73 73-151 (184)
87 3rpe_A MDAB, modulator of drug 86.4 5.6 0.00019 37.3 11.3 101 1-104 85-216 (218)
88 2fzv_A Putative arsenical resi 86.0 2.3 8E-05 41.6 8.7 70 1-73 125-194 (279)
89 3r6w_A FMN-dependent NADH-azor 85.9 2.9 9.9E-05 38.7 9.1 100 1-102 89-207 (212)
90 3p0r_A Azoreductase; structura 85.6 2.1 7.2E-05 39.9 7.9 100 1-102 94-206 (211)
91 3vo2_A Putative uncharacterize 84.8 1.8 6.1E-05 42.9 7.4 51 150-201 28-78 (310)
92 2amj_A Modulator of drug activ 84.7 5.4 0.00018 36.8 10.2 75 1-76 72-177 (204)
93 3s2y_A Chromate reductase; ura 84.8 0.19 6.6E-06 46.7 0.0 69 2-74 76-144 (199)
94 3tem_A Ribosyldihydronicotinam 81.0 3.7 0.00013 38.7 7.6 104 1-105 94-215 (228)
95 3f2v_A General stress protein 80.8 9.9 0.00034 34.8 10.2 102 1-103 60-181 (192)
96 1d4a_A DT-diaphorase, quinone 77.1 7.3 0.00025 37.7 8.6 103 1-104 95-215 (273)
97 3u7i_A FMN-dependent NADH-azor 73.9 9.7 0.00033 35.7 8.2 101 1-102 96-212 (223)
98 3l9w_A Glutathione-regulated p 67.1 25 0.00087 36.1 10.3 102 1-103 294-407 (413)
99 3lo8_A Ferredoxin--NADP reduct 61.2 17 0.00057 35.6 7.3 49 152-201 25-73 (311)
100 1mkz_A Molybdenum cofactor bio 44.2 21 0.00072 31.8 4.4 59 35-93 7-65 (172)
101 2xpn_B SPT6, chromatin structu 41.6 11 0.00037 22.0 1.2 12 38-49 3-14 (26)
102 3s2u_A UDP-N-acetylglucosamine 32.5 31 0.0011 34.5 4.0 25 405-429 3-29 (365)
103 4gi5_A Quinone reductase; prot 30.3 1.7E+02 0.0059 28.1 8.7 103 1-104 114-242 (280)
104 2lnb_A Z-DNA-binding protein 1 30.3 92 0.0031 23.9 5.1 26 527-552 41-66 (80)
105 1tvc_A Methane monooxygenase c 27.2 60 0.0021 30.2 4.8 43 154-201 9-56 (250)
106 2r6h_A NADH:ubiquinone oxidore 27.2 99 0.0034 29.3 6.5 41 156-201 10-51 (290)
107 3pzy_A MOG; ssgcid, seattle st 26.3 21 0.00073 31.6 1.2 57 36-93 5-63 (164)
108 2pjk_A 178AA long hypothetical 23.5 17 0.00057 32.8 -0.1 47 35-81 12-65 (178)
109 1lxj_A YBL001C, hypothetical 1 22.6 74 0.0025 25.8 3.7 75 14-96 21-98 (104)
110 1ep3_B Dihydroorotate dehydrog 22.4 86 0.003 29.4 4.9 41 157-202 7-47 (262)
111 1qfj_A Protein (flavin reducta 22.0 1.3E+02 0.0045 27.3 6.0 39 157-201 4-42 (232)
112 1krh_A Benzoate 1,2-dioxygenas 22.0 1.3E+02 0.0046 29.3 6.4 42 155-201 108-151 (338)
113 1y5e_A Molybdenum cofactor bio 21.3 45 0.0015 29.5 2.4 57 36-92 11-67 (169)
114 1umk_A B5R, NADH-cytochrome B5 20.8 1.7E+02 0.0058 27.4 6.7 42 154-200 15-58 (275)
115 2b4n_A Gastric inhibitory poly 20.4 83 0.0028 21.1 2.8 19 18-36 18-36 (42)
No 1
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=3.6e-104 Score=878.04 Aligned_cols=537 Identities=41% Similarity=0.770 Sum_probs=466.8
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.+||++||||+|++|+||+.||++|.+.. ..|++++||||||||++|++||+++|+++++|+++||++++++|++|+
T Consensus 73 ~vi~~~sT~G~G~~pd~~~~F~~~L~~~~---~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~~g~~D~ 149 (618)
T 3qe2_A 73 LVVFCMATYGEGDPTDNAQDFYDWLQETD---VDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDD 149 (618)
T ss_dssp EEEEEEECBGGGBCCGGGHHHHHHHHHCC---CCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEET
T ss_pred EEEEEcCccCCCCCCHHHHHHHHHHhhcc---ccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeeccccccc
Confidence 58999999999999999999999999743 359999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhCCCCCCCCcCCCccccccceEEEEecCCCc---ccccc--ccCCCCCCcccCCCCCe
Q 008747 82 DQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADA---SVGEK--SWGNANGHAVYDAQHPC 156 (555)
Q Consensus 82 ~~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~ 156 (555)
+.+.+++|++|++.+|++|.+.++.+... .. ...+.+++........ ...+. .........+++..+|+
T Consensus 150 ~~~~~~~~~~W~~~l~~~l~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (618)
T 3qe2_A 150 DGNLEEDFITWREQFWLAVCEHFGVEATG---EE---SSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPF 223 (618)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTCCCC---------CCCCSEEEEECTTCCGGGSBCSCCSSTTTTTSCCSCCSSSSCE
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhCCCccc---cc---ccccceeEEecccccccccccccccccccccccCCCcccCCcE
Confidence 99999999999999999999988643211 00 1223455554321110 00000 00111223346677899
Q ss_pred eeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCCCCC
Q 008747 157 RSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKS 236 (555)
Q Consensus 157 ~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~~~~~~~ 236 (555)
.++|+.|++|+. +++++|+||+|++++++++|+|||+|+|||.|+++.|+++|++||+++|+.|++...... .
T Consensus 224 ~a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~------~ 296 (618)
T 3qe2_A 224 LAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------S 296 (618)
T ss_dssp EEEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTT------C
T ss_pred EEEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCcc------c
Confidence 999999999995 578999999999998899999999999999999999999999999999999999754321 1
Q ss_pred CCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhc--CccCHHHHHHHHHhcCCCHHHHHhhCC
Q 008747 237 TLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLA--SPAGKDEYAQWIVASQRSLLEVMSEFP 313 (555)
Q Consensus 237 ~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~~~~~dvl~~f~ 313 (555)
..+.|+| |+|++++|++|+||+++|++.||+.||.||+|+.+|++|++|+ +++|+++|.+|+.+.+++++|||.+||
T Consensus 297 ~~~~~~p~~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fp 376 (618)
T 3qe2_A 297 NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCP 376 (618)
T ss_dssp SCCSSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHST
T ss_pred cCCCCCCCceEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCC
Confidence 2345788 9999999999999999999999999999999999999999999 778999999999999999999999999
Q ss_pred CCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEe
Q 008747 314 SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR 393 (555)
Q Consensus 314 s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~ 393 (555)
++++|+++|++.+ |+++||+|||||+|..++++++|+|+++.+.++.++.+.|+||+||+++.+.|+......++|+++
T Consensus 377 s~~~p~~~l~~~l-p~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~~~~~~v~v~~p 455 (618)
T 3qe2_A 377 SLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVR 455 (618)
T ss_dssp TBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC-----CCEEEEEEE
T ss_pred ccCCCHHHHHHhc-cccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCCCcceEEEEEEe
Confidence 9999999999765 999999999999998778999999999988888899999999999999987322101125889999
Q ss_pred cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEE
Q 008747 394 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVA 473 (555)
Q Consensus 394 ~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a 473 (555)
.|.|++|.++.+|+||||+|||||||+||++++......+...++++||||||+++.|++|++||+++.+.+.+++++++
T Consensus 456 ~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~l~~a 535 (618)
T 3qe2_A 456 KSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVA 535 (618)
T ss_dssp CCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEE
T ss_pred cCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhcCCCcEEEEE
Confidence 99999998888999999999999999999999987654444457899999999985699999999999999988899999
Q ss_pred EccCCCCcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEe
Q 008747 474 FSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRD 553 (555)
Q Consensus 474 ~Sr~~~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~d 553 (555)
|||++..++||||+|.++.+.+++++.++++||||||+..|+++|.++|.+|++++++++.++|++|+++|+++|||++|
T Consensus 536 ~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~l~~~~RY~~D 615 (618)
T 3qe2_A 536 FSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLD 615 (618)
T ss_dssp ETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred EcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 99998889999999999999999988889999999995599999999999999999999999999999999999999999
Q ss_pred eC
Q 008747 554 VW 555 (555)
Q Consensus 554 vw 555 (555)
||
T Consensus 616 v~ 617 (618)
T 3qe2_A 616 VW 617 (618)
T ss_dssp EE
T ss_pred ec
Confidence 99
No 2
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=6.7e-98 Score=836.38 Aligned_cols=533 Identities=32% Similarity=0.598 Sum_probs=454.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
+.+||++||||+|++|+||+.|++||.... ...|++++||||||||++|++||.+++.++++|+++||+++.+++++|
T Consensus 100 ~~vi~~~sT~G~G~~p~~~~~F~~~l~~~~--~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~~~~~~D 177 (682)
T 2bpo_A 100 VIVSIFISTYGEGDFPDGAVNFEDFICNAE--AGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEAD 177 (682)
T ss_dssp SEEEEEEECBTTTBCCSSCHHHHHHHHTCC--TTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEEE
T ss_pred CeEEEEeCccCCCCCCHHHHHHHHHHHhcc--chhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeECcEEEe
Confidence 368999999999999999999999998753 235899999999999999999999999999999999999999999999
Q ss_pred CCC-CchhhHHHHHHHHHHHHHhhhCCCCCCCCcCCCccccccceEEEEecC--CCccccccc---cCC--------CCC
Q 008747 81 DDQ-CIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDN--ADASVGEKS---WGN--------ANG 146 (555)
Q Consensus 81 ~~~-~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~--------~~~ 146 (555)
++. +.+++|++|.+.||++|.+.++..... .. ..+.+++...+. ......+.. ... .+.
T Consensus 178 ~~~~~~~~~~~~W~~~l~~~l~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (682)
T 2bpo_A 178 DGAGTTDEDYMAWKDSILEVLKDELHLDEQE-AK------FTSQFQYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQ 250 (682)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHHHHTTCCCCC-CC------CCCSBCCEECSSCCTTSCSSCSSGGGSTTSCCCCCTTCCB
T ss_pred cCCcccHHHHHHHHHHHHHHHHhhcCCcccc-cc------cCCcceeEecccCCccccccCccccccccccccccccccc
Confidence 874 788999999999999999887532211 01 112233322211 000000000 000 011
Q ss_pred CcccCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeC
Q 008747 147 HAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTD 226 (555)
Q Consensus 147 ~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~ 226 (555)
...++..+|+.++|+.|++|+. +++|+|+||+|++++++++|+|||+|+|||.|+++.|+++|++||+++|+.|++...
T Consensus 251 ~~~~~~~~p~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~~ 329 (682)
T 2bpo_A 251 LGPFDLSQPYIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPL 329 (682)
T ss_dssp CSCCBTTBCCCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCBS
T ss_pred cCcccCCCceEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEecC
Confidence 2345667899999999999998 889999999999988899999999999999999999999999999999999988643
Q ss_pred CCCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCH
Q 008747 227 KEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSL 305 (555)
Q Consensus 227 ~~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~ 305 (555)
.. ..+.|+| |+|++++|++|+||+++|++.||+.||.||+|+++|++|++|+ +|++.|.+|+.+.++++
T Consensus 330 ~~--------~~~~p~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i 399 (682)
T 2bpo_A 330 DP--------TVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNI 399 (682)
T ss_dssp ST--------TCCCSSCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCH
T ss_pred Cc--------ccCCCCCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCH
Confidence 21 1345788 9999999999999999999999999999999999999999999 69999999999999999
Q ss_pred HHHHhhCC----CCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCC---CCeeccccchhhhccCC
Q 008747 306 LEVMSEFP----SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPT---GRVHKGLCSTWMKNSLP 378 (555)
Q Consensus 306 ~dvl~~f~----s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~---g~~~~G~~S~~L~~~~~ 378 (555)
+|||.+|| ++++|++++++. +|+++||+|||||+|..+++.++|+|+++.+.++. ++.+.|+||+||+++.+
T Consensus 400 ~dvL~~fp~~~~s~~~p~~~l~~~-lp~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~ 478 (682)
T 2bpo_A 400 ADALKYLSDGAKWDTVPMQFLVES-VPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQL 478 (682)
T ss_dssp HHHHHHHHTTCCCTTSCHHHHHHH-SCBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHH
T ss_pred HHHHHhccCcccccCCCHHHHHHh-CcccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhccc
Confidence 99999999 889999999976 59999999999999987779999999988887775 67789999999998765
Q ss_pred C-----------CcCC---------CCceeeEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHh------h
Q 008747 379 M-----------EKSN---------DCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQE------A 432 (555)
Q Consensus 379 ~-----------~~~~---------~~~~v~v~~~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~------~ 432 (555)
+ ++.. .+..++++++.+.|++|.++.+|+||||+||||||||||++++..... .
T Consensus 479 g~~~~~~~~~~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~ 558 (682)
T 2bpo_A 479 AQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGN 558 (682)
T ss_dssp HHTTCCTTTSCCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----
T ss_pred ccccccccccccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccc
Confidence 2 1110 013578888888999998888999999999999999999999987654 2
Q ss_pred cCCCCCeEEEEeccCCCCCCCcHHHHHHHH-HcCCcceEEEEEcc-CCCCcccccchhhccHHHHHHHHhCCCEEEEecC
Q 008747 433 GAELGPSLLFFGCRNRKMDYIYEDELNNFV-QSGALSQLIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGD 510 (555)
Q Consensus 433 ~~~~~~~~L~~G~R~~~~d~ly~del~~~~-~~~~~~~l~~a~Sr-~~~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~ 510 (555)
+...++++||||||++ .|++|++||++++ +.+.+++++++||| ++..++||||+|.++.+.+++++.++++||||||
T Consensus 559 g~~~~~~~L~fG~R~~-~D~ly~dEl~~~~~~~g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGp 637 (682)
T 2bpo_A 559 NVSLGKHILFYGSRNT-DDFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGD 637 (682)
T ss_dssp CCCCCCEEEEEEESSS-SSCTTTTTHHHHHHHHGGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEEC
T ss_pred cCCcCCEEEEEecCCh-hhhhhHHHHHHHHHhcCCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCC
Confidence 3335899999999999 5999999999994 55777789999999 5667999999999999999998878999999999
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEeeC
Q 008747 511 AKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 511 ~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
++.|+++|.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 638 a~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 638 AKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp STTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred chHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 779999999999999999999999999999999999999999999
No 3
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=3.8e-95 Score=814.13 Aligned_cols=536 Identities=32% Similarity=0.597 Sum_probs=447.9
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcC----------------------------C-----------CCCCCCceEE
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKE----------------------------G-----------GEWLQKLKYG 42 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~----------------------------~-----------~~~l~~~~~a 42 (555)
.+||++||||+|+||+||+.|+++|.+... + ...|+|++||
T Consensus 60 ~vl~vtsT~G~Gdpp~n~~~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~~~~~a 139 (688)
T 1tll_A 60 LVLVVTSTFGNGDPPENGEKFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLANVRFS 139 (688)
T ss_dssp EEEEEECCBTTTBCCGGGHHHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTTTCEEE
T ss_pred eEEEEEcccCCCcCCHHHHHHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCCCCeEE
Confidence 689999999999999999999999997620 0 2358999999
Q ss_pred EEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCCCCchhhHHHHHHHHHHHHHhhhCCCCCCCCcC------CC
Q 008747 43 VFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVS------TP 116 (555)
Q Consensus 43 vfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~------~~ 116 (555)
||||||++|++||++++.+|++|+++||++|++++++|+..+.+++|+.|.+.+|++|.+.+.......... .+
T Consensus 140 VfGlGds~Y~~F~~~~k~ld~~L~~lGa~rl~~~~~~D~~~g~e~~f~~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 219 (688)
T 1tll_A 140 VFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEKPNNSLISN 219 (688)
T ss_dssp EEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEETTTTHHHHHHHHHHHHHHHHHHHHTCCSSSCCC-------CC
T ss_pred EEeeccCchHHHHHHHHHHHHHHHHcCCceeecceeeccCCCcHHHHHHHHHHHHHHHHHhcCCCccccccccccccccc
Confidence 999999999999999999999999999999999999999888999999999999999998874321110000 00
Q ss_pred -ccccccceEEEEecCCCccccccccCCCCCCcccCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCC-CccccCCCe
Q 008747 117 -YTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT-GLTYETGDH 194 (555)
Q Consensus 117 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~-~~~y~~GD~ 194 (555)
.....+.+++......... . .....++..+|+.++|+.|++|+.++++++|+||+|+++++ +++|+|||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~ 291 (688)
T 1tll_A 220 DRSWKRNKFRLTYVAEAPDL--T------QGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDH 291 (688)
T ss_dssp SSSCCTTTEEEEECSCCCCH--H------HHHHHHTTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCE
T ss_pred ccccCCcceEEecccccccc--c------ccccccccCCceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCE
Confidence 0011223444332111000 0 00012345678999999999999999999999999999764 799999999
Q ss_pred EEEeecCCHHHHHHHHHHcCC--CCCcEEEEeeCCCCCCCCC---CCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHH
Q 008747 195 VGVYCENLSETVEEALSLLGL--SPDTYFSLHTDKEDGTPLG---KSTLPPTFPPCSLRTALTKYADLLSSPKKSALLAL 269 (555)
Q Consensus 195 i~i~p~N~~~~V~~~l~~l~l--~~~~~~~i~~~~~~~~~~~---~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~l 269 (555)
|+|+|.|+++.|+++|++|++ ++|+.|++........+.+ ....+.++||+|++++|++|+||+++|++.||+.|
T Consensus 292 l~V~P~N~~~~V~~~l~~l~~~~~~d~~v~~~~~~~~~~p~~~~~~~~~~~~~p~~tl~~~l~~~lDi~~~p~~~~l~~l 371 (688)
T 1tll_A 292 LGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQF 371 (688)
T ss_dssp EEECCCCCHHHHHHHHTTCSSCCCSCSCEEEEEEEECCCSSSCCEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHH
T ss_pred EEEecCCCHHHHHHHHHHhCCCCCCCeEEEEeccccccCCCcccccccccCCCCCccHHHHHHhheeCCCCCCHHHHHHH
Confidence 999999999999999999986 6789998864321111111 11223467789999999999999999999999999
Q ss_pred HHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHhhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEE
Q 008747 270 AAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIH 349 (555)
Q Consensus 270 a~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~ 349 (555)
|.||+|+++|++|++|++ +++.|.+|+...+++++|||.+||++++|+++++.. +|++++|+|||||+|..+++.++
T Consensus 372 a~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~~~i~evl~~fps~~~p~~~l~~~-lp~l~~R~YSIsSsp~~~~~~i~ 448 (688)
T 1tll_A 372 ASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQ-LSLLQPRYYSISSSPDMYPDEVH 448 (688)
T ss_dssp HTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCHHHHHHHSTTBCCCHHHHHHH-SCBCCCEEEEBCSCTTTSTTEEE
T ss_pred HHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcCCCHHHHHHhCCCcCCCHHHHHHh-CcccceeEEeecCCcccCCCeEE
Confidence 999999999999999996 788999999999999999999999999999999976 49999999999999986678999
Q ss_pred EEEEEEEeeCCC--CCeeccccchhhhccCCCCcCCCCceeeEEEe-cCCCCCCCCCCCCeEEEccCCccchhHHHHHHH
Q 008747 350 VTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR-QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQER 426 (555)
Q Consensus 350 i~v~~v~~~~~~--g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~-~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~ 426 (555)
|+|+++.+.++. |+.+.|.||+||+++.+|+ .+.|+++ .|.|++|.+..+|+||||+|||||||+||++++
T Consensus 449 l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd------~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~ 522 (688)
T 1tll_A 449 LTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADD------VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQR 522 (688)
T ss_dssp EEEECCEEETGGGTSCEEECHHHHHHTTCCTTS------EEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHH
T ss_pred EEEEEEEEecCCCCCCcCCCchhHHHHhCCCCC------EEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHH
Confidence 999988776654 3678899999999876643 4788885 558999988789999999999999999999998
Q ss_pred HHHHh-hcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCCC-cccccchhhcc-HHHHHHHH-hCC
Q 008747 427 FALQE-AGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT-KEYVQHKMMEK-SSDIWNML-SEG 502 (555)
Q Consensus 427 ~~~~~-~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~-k~yVq~~l~~~-~~~v~~~l-~~~ 502 (555)
..... .+...++++||||||+++.|++|++||+++.+.+.+++++++|||++.. ++|||++|.++ .+.+++++ .++
T Consensus 523 ~~~~~~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~ 602 (688)
T 1tll_A 523 QFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQG 602 (688)
T ss_dssp HHHHHHSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSC
T ss_pred HHhhhhccCCCCCEEEEEEeccchhhhhHHHHHHHHHHcCCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCC
Confidence 76422 1233578999999999876899999999999988877899999998654 89999999988 77888776 578
Q ss_pred CEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEeeC
Q 008747 503 AYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 503 ~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
++|||||| +.|+++|.++|.+++.++++++.++|++|+++|+.++||++|+|
T Consensus 603 ~~vYvCGp-~~M~~~V~~~L~~i~~~~gg~~~~~a~~~l~~l~~~~ry~~Evf 654 (688)
T 1tll_A 603 GHIYVCGD-VTMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 654 (688)
T ss_dssp CEEEEEEE-HHHHHHHHHHHHHHHHTTTCCCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEeCC-HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhhcCCEEEEec
Confidence 99999999 68999999999999999999999999999999999999999998
No 4
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=2.3e-84 Score=691.80 Aligned_cols=429 Identities=41% Similarity=0.765 Sum_probs=377.1
Q ss_pred ccccceEEEEecCCCc---ccccccc--CCCCCCcccCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCC
Q 008747 119 AAISEYRVVFYDNADA---SVGEKSW--GNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGD 193 (555)
Q Consensus 119 ~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD 193 (555)
...++|+++..+..+. +..+... ...++..+++.++|+.|+|+.|++||. +++|+|+||+|++++++++|+|||
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~ge~~~~~~~~~~~~~~~~~~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD 99 (458)
T 3qfs_A 21 MSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGD 99 (458)
T ss_dssp ---CCEEEEECTTCCGGGCBSSCSSSTTTTTSCCSCCCSSSCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTC
T ss_pred cceeceEEEEccCccccccccCChhhcccccccCCCCCCCCCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCC
Confidence 3556788887654432 1222211 234456678899999999999999997 578999999999998899999999
Q ss_pred eEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHh
Q 008747 194 HVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAH 272 (555)
Q Consensus 194 ~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~ 272 (555)
+|+|||.|+++.|+++|++||+++|+.|++...... ...+.|+| |+|++++|++|+||+++|++.||+.||.|
T Consensus 100 ~l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~------~~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la~~ 173 (458)
T 3qfs_A 100 HVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQY 173 (458)
T ss_dssp EEEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTT------CSCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGG
T ss_pred EEEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCcc------cccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999754321 12345788 99999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcC--ccCHHHHHHHHHhcCCCHHHHHhhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEE
Q 008747 273 ASDPTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 350 (555)
Q Consensus 273 ~~~~~~k~~L~~l~~--~~~~~~~~~~~~~~~~~~~dvl~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i 350 (555)
|+|+.+|++|++|++ ++|+++|.+|+.+.+++++|||.+||++++|+++|++.+ |+++||+|||||+|..++++++|
T Consensus 174 a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~fps~~~p~~~ll~~l-p~l~pR~YSIsSsp~~~~~~i~l 252 (458)
T 3qfs_A 174 ASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHI 252 (458)
T ss_dssp BCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEE
T ss_pred cCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHHhhC-CCCcceeEeeccCcccCCCEEEE
Confidence 999999999999987 468899999999999999999999999999999999765 99999999999999877899999
Q ss_pred EEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHH
Q 008747 351 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQ 430 (555)
Q Consensus 351 ~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~ 430 (555)
+|++|.+.++.|+.+.|+||+||+++.++++......++++++.|.|++|.++.+|+||||+|||||||+||++++....
T Consensus 253 tV~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~~~~~~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~ 332 (458)
T 3qfs_A 253 CAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLR 332 (458)
T ss_dssp EEECCEEECTTSCEEECHHHHHHHTCCSSCSSCCCCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCCchhHHHHhhccCCccCCceEEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHH
Confidence 99999888888899999999999999887642222258899999999999888899999999999999999999987544
Q ss_pred hhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCCCcccccchhhccHHHHHHHHhCCCEEEEecC
Q 008747 431 EAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGD 510 (555)
Q Consensus 431 ~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~ 510 (555)
..+...++++||||||++..|++|++||+++.+.+.++++++||||++..++|||++|.++.+.+++++.++++||||||
T Consensus 333 ~~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~g~l~~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp 412 (458)
T 3qfs_A 333 QQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGD 412 (458)
T ss_dssp HHTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEE
T ss_pred hcCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHcCCCCEEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECC
Confidence 34434578999999999755999999999999999887899999999888999999999999999998888999999999
Q ss_pred CcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEeeC
Q 008747 511 AKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 511 ~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
+..|+++|.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 413 ~~~M~~~V~~~L~~i~~~~g~~~~~~A~~~~~~l~~~~RY~~Dvw 457 (458)
T 3qfs_A 413 ARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVW 457 (458)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeEEEec
Confidence 568999999999999999999999999999999999999999999
No 5
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=1e-79 Score=669.63 Aligned_cols=407 Identities=34% Similarity=0.625 Sum_probs=352.8
Q ss_pred CCcccCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCC--CcEEEE
Q 008747 146 GHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP--DTYFSL 223 (555)
Q Consensus 146 ~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~--~~~~~i 223 (555)
+..+++..+|+.++|+.|++||.++++|+|+||+||+++++++|+|||+|+|||.|+++.|+++|++||+++ +..|++
T Consensus 105 ~~~~~~~~~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~~ 184 (539)
T 2qtl_A 105 QVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVLL 184 (539)
T ss_dssp --------CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEEE
T ss_pred ccCCCCCCCCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEEE
Confidence 345677889999999999999999999999999999998889999999999999999999999999999985 567777
Q ss_pred eeCCCCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcC
Q 008747 224 HTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQ 302 (555)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~ 302 (555)
........ .+..+|+++| ++|++++|++|+||+++|++.||+.||.||+|+++|++|.+|++++|+++|.+|+.+.+
T Consensus 185 ~~~~~~~~--~~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~ 262 (539)
T 2qtl_A 185 KIKADTKK--KGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAC 262 (539)
T ss_dssp EECTTCCC--TTCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTT
T ss_pred eccccccC--CCccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcC
Confidence 65432111 1245678898 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeC--CCCCeeccccchhhhccC---
Q 008747 303 RSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKT--PTGRVHKGLCSTWMKNSL--- 377 (555)
Q Consensus 303 ~~~~dvl~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~--~~g~~~~G~~S~~L~~~~--- 377 (555)
++++|+|.+||++++|+++|++. +|+++||+|||||+|..+++.++|+|+++.+.+ ..++.+.|+||+||+++.
T Consensus 263 ~~lldvL~~fps~~~p~~~ll~~-lp~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~ 341 (539)
T 2qtl_A 263 ACLLDLLLAFPSCQPPLSLLLEH-LPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASV 341 (539)
T ss_dssp CCHHHHHHHSTTBCCCHHHHHHH-SCBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTT
T ss_pred CCHHHHHHhCCCcCCCHHHHHHh-CcCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhh
Confidence 99999999999999999999976 599999999999999766799999999886643 345678899999999983
Q ss_pred --------CCCc-CCCCceeeEEEec-CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc--CCCCCeEEEEec
Q 008747 378 --------PMEK-SNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG--AELGPSLLFFGC 445 (555)
Q Consensus 378 --------~~~~-~~~~~~v~v~~~~-~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~--~~~~~~~L~~G~ 445 (555)
+|+. ...+..++|+++. +.|++|.+..+|+||||+||||||||||++++......+ ...++++|||||
T Consensus 342 ~~~~~~~~~Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~ 421 (539)
T 2qtl_A 342 LQPNIHASHEDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGC 421 (539)
T ss_dssp C--------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEE
T ss_pred ccccccCCCCCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEE
Confidence 3320 0011257888886 489999888899999999999999999999987654322 235889999999
Q ss_pred cCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCC------CcccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHH
Q 008747 446 RNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP------TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDV 518 (555)
Q Consensus 446 R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~------~k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v 518 (555)
|+++.|++|++||+++.+.+.+++++++|||++. .++||||+|.++.+.+++++ .++++||||||+..|+++|
T Consensus 422 R~~~~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V 501 (539)
T 2qtl_A 422 RHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDV 501 (539)
T ss_dssp SCTTTCCTTHHHHHHHHHTTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHH
Confidence 9995599999999999999988899999999876 68999999999999999988 5789999999944999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCEEEeeC
Q 008747 519 HRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 519 ~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 502 ~~~L~~i~~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw 538 (539)
T 2qtl_A 502 HDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538 (539)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHCCcEEEEcC
Confidence 9999999999999999999999999999999999999
No 6
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=3.6e-78 Score=635.54 Aligned_cols=382 Identities=34% Similarity=0.613 Sum_probs=337.9
Q ss_pred CCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCC
Q 008747 154 HPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 233 (555)
Q Consensus 154 ~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~~~~ 233 (555)
+++.++|+.|++||.++++|+|+||+|+++ .+++|+|||+|+|||.|+++.|+++|++||+++++.+++.....
T Consensus 5 ~~~~a~v~~n~~Lt~~~~~~~~~hie~~l~-~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~----- 78 (393)
T 4dql_A 5 GAFSTNVVASKELQQPGSARSTRHLEIELP-KEASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEE----- 78 (393)
T ss_dssp CCEEEEEEEEEECSCTTCSCCEEEEEEECC-TTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC--------
T ss_pred CcEEEEEEeEEEcCCCCCCceEEEEEEECC-CCCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCC-----
Confidence 577899999999999999999999999997 58999999999999999999999999999999999887653211
Q ss_pred CCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHhhC
Q 008747 234 GKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEF 312 (555)
Q Consensus 234 ~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~~f 312 (555)
.....|++ |+|++++|++ +||+++|++.||+.||.||+|+.+|++|++|++. +.|.+++...+++++|||.+|
T Consensus 79 --~~~~~p~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~f 152 (393)
T 4dql_A 79 --KLAHLPLAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKY 152 (393)
T ss_dssp ----------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHC
T ss_pred --ccccCCCCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhC
Confidence 01123456 8999999999 9999999999999999999999999999999874 379999999999999999999
Q ss_pred CCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCC-eeccccchhhhccCCCCcCCCCceeeEE
Q 008747 313 PSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIF 391 (555)
Q Consensus 313 ~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~-~~~G~~S~~L~~~~~~~~~~~~~~v~v~ 391 (555)
|++++|+++|+++ +|+++||+|||||+|..+++.++|+|+++...++.|+ .+.|.||+||+++.+|+ .+.++
T Consensus 153 ps~~~p~~~~l~~-lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~Gd------~v~v~ 225 (393)
T 4dql_A 153 PACEMKFSEFIAL-LPSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQEGD------TITCF 225 (393)
T ss_dssp TTCCCCHHHHHHT-SCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCTTC------EEEEE
T ss_pred CCCCCCHHHHHHh-CCCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCCcC------EEEEE
Confidence 9999999999976 5999999999999998777999999998877666554 56799999999976654 36655
Q ss_pred Ee--cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcce
Q 008747 392 VR--QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 469 (555)
Q Consensus 392 ~~--~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~ 469 (555)
++ .|.|.+|.+..+|+||||+|||||||+||++++......+...++++||||||++..|++|++||+++.+.+.+ +
T Consensus 226 v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~~~l-~ 304 (393)
T 4dql_A 226 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSEGII-T 304 (393)
T ss_dssp EECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHTTSC-E
T ss_pred EEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhCCCe-E
Confidence 54 58999998888999999999999999999999876554444457899999999965599999999999988776 7
Q ss_pred EEEEEcc-CCCCcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCC
Q 008747 470 LIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTG 548 (555)
Q Consensus 470 l~~a~Sr-~~~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~ 548 (555)
++++||| ++..++||||++.++.+.+++++.++++||||||++.|.++|+++|.+|++++++++.++|++|+++|+++|
T Consensus 305 l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~ 384 (393)
T 4dql_A 305 LHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKG 384 (393)
T ss_dssp EEEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCC
Confidence 9999999 566799999999999999999888899999999978999999999999999999999999999999999999
Q ss_pred CEEEeeC
Q 008747 549 RYLRDVW 555 (555)
Q Consensus 549 Ry~~dvw 555 (555)
||++|||
T Consensus 385 Ry~~dv~ 391 (393)
T 4dql_A 385 RYAKDVW 391 (393)
T ss_dssp CEEEEEE
T ss_pred CEEEEec
Confidence 9999999
No 7
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=9.1e-76 Score=625.97 Aligned_cols=396 Identities=34% Similarity=0.639 Sum_probs=347.4
Q ss_pred cCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCC-CccccCCCeEEEeecCCHHHHHHHHHHcCC--CCCcEEEEeeC
Q 008747 150 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT-GLTYETGDHVGVYCENLSETVEEALSLLGL--SPDTYFSLHTD 226 (555)
Q Consensus 150 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~-~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l--~~~~~~~i~~~ 226 (555)
++..+|+.++|+.|++|+.++++++|+||+|+++++ +++|+|||+|+|+|.|+++.|+++|++|++ ++|+.|++...
T Consensus 25 ~~~~~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~~~ 104 (435)
T 1f20_A 25 VHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEML 104 (435)
T ss_dssp HHTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEEEE
T ss_pred cccCCcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEecc
Confidence 456789999999999999999999999999999765 799999999999999999999999999976 77899988643
Q ss_pred CCCCCCCC---CCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCC
Q 008747 227 KEDGTPLG---KSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQR 303 (555)
Q Consensus 227 ~~~~~~~~---~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~ 303 (555)
.....+.+ ....+.++||+|++++|++|+||+++|++.||+.||.||+|+++|++|++|++ +++.|.+|+...++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~p~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~~~ 182 (435)
T 1f20_A 105 EERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNP 182 (435)
T ss_dssp EEESSSTTCEEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCC
T ss_pred ccccCCCCccccccccCCCCCccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhccCC
Confidence 11111111 01224567789999999999999999999999999999999999999999996 78899999999999
Q ss_pred CHHHHHhhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCC--CeeccccchhhhccCCCCc
Q 008747 304 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTG--RVHKGLCSTWMKNSLPMEK 381 (555)
Q Consensus 304 ~~~dvl~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g--~~~~G~~S~~L~~~~~~~~ 381 (555)
+++|+|.+||++++|+++++.. +|++++|+|||||+|..+++.++|+|+++.+.++.| +.+.|.||+||+++.+|+
T Consensus 183 ~i~~vl~~fps~~~p~~~l~~~-lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd- 260 (435)
T 1f20_A 183 TMVEVLEEFPSIQMPATLLLTQ-LSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADD- 260 (435)
T ss_dssp CHHHHHHHSTTBCBCHHHHHHH-SCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTTC-
T ss_pred CHHHHHHhCCcCCCCHHHHHHh-CCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCCC-
Confidence 9999999999999999999976 499999999999999866789999999887766643 678899999999876643
Q ss_pred CCCCceeeEEEe-cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHh-hcCCCCCeEEEEeccCCCCCCCcHHHHH
Q 008747 382 SNDCSWAPIFVR-QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQE-AGAELGPSLLFFGCRNRKMDYIYEDELN 459 (555)
Q Consensus 382 ~~~~~~v~v~~~-~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~-~~~~~~~~~L~~G~R~~~~d~ly~del~ 459 (555)
.+.|+++ .|.|.+|.+..+|+||||+|||||||+||++++..... .+...++++||||||+++.|++|++||+
T Consensus 261 -----~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~El~ 335 (435)
T 1f20_A 261 -----VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETL 335 (435)
T ss_dssp -----EEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHH
T ss_pred -----EEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHHHHH
Confidence 4788885 56999998878999999999999999999999976421 1233578999999999876899999999
Q ss_pred HHHHcCCcceEEEEEccCCCC-cccccchhhcc-HHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHH
Q 008747 460 NFVQSGALSQLIVAFSREGPT-KEYVQHKMMEK-SSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSK 536 (555)
Q Consensus 460 ~~~~~~~~~~l~~a~Sr~~~~-k~yVq~~l~~~-~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~ 536 (555)
++.+.+.+++++++|||++.. ++|||++|.++ .+.+++++ .++++|||||| +.|+++|.++|.+++.++++++.++
T Consensus 336 ~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp-~~M~~~V~~~L~~i~~~~~~~~~~~ 414 (435)
T 1f20_A 336 QAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGD-VTMAADVLKAIQRIMTQQGKLSEED 414 (435)
T ss_dssp HHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEEC-HHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHcCCccEEEEEECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCC-hhHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999988887899999998654 89999999987 77788876 57899999999 6899999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEeeC
Q 008747 537 AESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 537 a~~~~~~l~~~~Ry~~dvw 555 (555)
|++|+++|+++|||++|||
T Consensus 415 a~~~~~~l~~~~RY~~Dv~ 433 (435)
T 1f20_A 415 AGVFISRLRDDNRYHEDIF 433 (435)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEec
Confidence 9999999999999999999
No 8
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=7.9e-74 Score=599.59 Aligned_cols=368 Identities=31% Similarity=0.576 Sum_probs=332.6
Q ss_pred ccCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCC
Q 008747 149 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 228 (555)
Q Consensus 149 ~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~ 228 (555)
.++..+|+.++|+.|++||.++++++|+||+|++++++++|+|||+|+|+|+|+++.|+++|++||+++|+.+++.
T Consensus 5 ~~~~~~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~---- 80 (374)
T 1ddg_A 5 PYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE---- 80 (374)
T ss_dssp CCBTTBCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET----
T ss_pred CCCCCCCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC----
Confidence 3567789999999999999999999999999999888899999999999999999999999999999999998873
Q ss_pred CCCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHH
Q 008747 229 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 308 (555)
Q Consensus 229 ~~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dv 308 (555)
+ .|+|++++|++|+||+ +|++.||+.||.||+|++ |++|++ +++.|.+|+. +++++|+
T Consensus 81 -~------------~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~~--~~~~~~~~~~--~~~~~~v 138 (374)
T 1ddg_A 81 -G------------KTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLVG--DKAKLQHYAA--TTPIVDM 138 (374)
T ss_dssp -T------------EEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGTT--CTHHHHHHHH--HSCHHHH
T ss_pred -C------------CCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHhc--ChHHHHHHHc--CCCHHHH
Confidence 1 1799999999999999 899999999999999974 888884 7788999986 4899999
Q ss_pred HhhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhc-cCCCCcCCCCce
Q 008747 309 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSW 387 (555)
Q Consensus 309 l~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~~ 387 (555)
|.+||+ ++++|||+.+. +++++|+|||||+|..+++.++|+|+++.+.++ |+.+.|.||+||++ +.+|+ .
T Consensus 139 l~~~p~-~~~~Gq~v~l~-~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~Gd------~ 209 (374)
T 1ddg_A 139 VRFSPA-QLDAEALINLL-RPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEG------E 209 (374)
T ss_dssp HHHSCC-CCCHHHHHHHS-CBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCSSC------E
T ss_pred HHHCCC-CCCHHHHHhhc-cCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCCCC------E
Confidence 999998 99999999765 789999999999998667899999998876665 67788999999998 65543 4
Q ss_pred eeEEEe-cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCC
Q 008747 388 APIFVR-QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA 466 (555)
Q Consensus 388 v~v~~~-~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~ 466 (555)
+.+.++ +|.|.+|.+..+|+||||+|||||||+||++++.... ..++++||||||+++.|++|++||+++.+.+.
T Consensus 210 v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~----~~~~~~L~~G~R~~~~d~ly~~El~~~~~~~~ 285 (374)
T 1ddg_A 210 VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE----APGKNWLFFGNPHFTEDFLYQVEWQRYVKEGV 285 (374)
T ss_dssp EEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT----CCSCEEEEEEESCHHHHCTTHHHHHHHHHTTS
T ss_pred EEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC----CCCCEEEEEEeCCchhhhhHHHHHHHHHHhCC
Confidence 778885 5689999878899999999999999999999997653 23789999999997449999999999999988
Q ss_pred cceEEEEEccCCCCcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 008747 467 LSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQM 546 (555)
Q Consensus 467 ~~~l~~a~Sr~~~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~ 546 (555)
+++++++|||++..++|||++|.++.+.+++++.++++|||||+++.|+++|.++|.+++.++++++.++|++|+++|++
T Consensus 286 ~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~ 365 (374)
T 1ddg_A 286 LTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRV 365 (374)
T ss_dssp CCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 88999999999888999999999998899998878999999993389999999999999999999999999999999999
Q ss_pred CCCEEEeeC
Q 008747 547 TGRYLRDVW 555 (555)
Q Consensus 547 ~~Ry~~dvw 555 (555)
+|||++|||
T Consensus 366 ~~Ry~~dv~ 374 (374)
T 1ddg_A 366 ERRYQRDVY 374 (374)
T ss_dssp TTCEEEEEC
T ss_pred CCCeEEecC
Confidence 999999999
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=9.7e-37 Score=312.48 Aligned_cols=271 Identities=24% Similarity=0.449 Sum_probs=218.3
Q ss_pred CCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCC
Q 008747 151 DAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDG 230 (555)
Q Consensus 151 ~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~ 230 (555)
+...++.++|+.+++++..++.+++++|+|+.++ ...|+||+++.|.++|.. .
T Consensus 33 ~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~------------------------~-- 85 (314)
T 1fnb_A 33 KPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEG-EIPYREGQSVGVIPDGED------------------------K-- 85 (314)
T ss_dssp BTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC------------------------T--
T ss_pred CCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCC-CCCcCCCCEEEEecCCCC------------------------c--
Confidence 3456788999999999988888999999999865 488999999999876521 0
Q ss_pred CCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHh
Q 008747 231 TPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMS 310 (555)
Q Consensus 231 ~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~ 310 (555)
.|
T Consensus 86 ----------------------------------------------------------~g-------------------- 87 (314)
T 1fnb_A 86 ----------------------------------------------------------NG-------------------- 87 (314)
T ss_dssp ----------------------------------------------------------TS--------------------
T ss_pred ----------------------------------------------------------CC--------------------
Confidence 00
Q ss_pred hCCCCCCChHHHHHHhcCCCcccccccCCCCCC---CCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCce
Q 008747 311 EFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSW 387 (555)
Q Consensus 311 ~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~ 387 (555)
.+..+|+|||+|+|.. ..+.++|+|+.+.+.++.|+.+.|.||+||+++.+|+ .
T Consensus 88 -----------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd------~ 144 (314)
T 1fnb_A 88 -----------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGA------E 144 (314)
T ss_dssp -----------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTC------E
T ss_pred -----------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCC------E
Confidence 0236799999999863 2578999998776666667777899999999976653 3
Q ss_pred eeEEEecCCCC-CCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc-CCCCCeEEEEeccCCCCCCCcHHHHHHHHHcC
Q 008747 388 APIFVRQSNFK-LPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG-AELGPSLLFFGCRNRKMDYIYEDELNNFVQSG 465 (555)
Q Consensus 388 v~v~~~~~~F~-lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~ 465 (555)
+.|..+.|.|. +|.+..+|+||||+|||||||++|++++......+ ...++++||||||+++ |++|.+||+++.+.+
T Consensus 145 v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~el~~l~~~~ 223 (314)
T 1fnb_A 145 VKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSS-SLLYKEEFEKMKEKA 223 (314)
T ss_dssp EEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGG-GCCSHHHHHHHHHHC
T ss_pred EEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHH-HhhhHHHHHHHHHhC
Confidence 67888888764 56555789999999999999999999986432111 1136799999999986 999999999998765
Q ss_pred C-cceEEEEEccCCC----CcccccchhhccHHHHHHHHh-CCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHH
Q 008747 466 A-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAES 539 (555)
Q Consensus 466 ~-~~~l~~a~Sr~~~----~k~yVq~~l~~~~~~v~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~ 539 (555)
. ..++++++||++. .++||++.|.+..+.+++.+. .++.||+||| +.|+++|+++|.+++.+.+ . +|++
T Consensus 224 ~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~~~g-~---~~~~ 298 (314)
T 1fnb_A 224 PDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGL-KGMEKGIDDIMVSLAAAEG-I---DWIE 298 (314)
T ss_dssp TTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEEC-TTHHHHHHHHHHHHHHTTT-C---CHHH
T ss_pred CCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECC-HHHHHHHHHHHHHHHHHhC-c---hHHH
Confidence 4 4589999999743 478999999987777766553 5889999999 8999999999999998765 3 4789
Q ss_pred HHHHHHHCCCEEEeeC
Q 008747 540 MVKNLQMTGRYLRDVW 555 (555)
Q Consensus 540 ~~~~l~~~~Ry~~dvw 555 (555)
|+++|+++|||++|||
T Consensus 299 ~~~~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 299 YKRQLKKAEQWNVEVY 314 (314)
T ss_dssp HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHCCcEEEecC
Confidence 9999999999999999
No 10
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=3e-36 Score=307.35 Aligned_cols=272 Identities=25% Similarity=0.442 Sum_probs=217.2
Q ss_pred CCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCC
Q 008747 151 DAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDG 230 (555)
Q Consensus 151 ~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~~ 230 (555)
+...++.++|+.++++++.++.+++++|+|++++..+.|+||+++.|+++|... +
T Consensus 17 ~~~~~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~------------------------~- 71 (304)
T 2bmw_A 17 RPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDK------------------------N- 71 (304)
T ss_dssp BTTBCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCT------------------------T-
T ss_pred CCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcc------------------------c-
Confidence 345678899999999999888999999999987656899999999998876310 0
Q ss_pred CCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHh
Q 008747 231 TPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMS 310 (555)
Q Consensus 231 ~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl~ 310 (555)
|
T Consensus 72 -----------------------------------------------------------g-------------------- 72 (304)
T 2bmw_A 72 -----------------------------------------------------------G-------------------- 72 (304)
T ss_dssp -----------------------------------------------------------S--------------------
T ss_pred -----------------------------------------------------------C--------------------
Confidence 0
Q ss_pred hCCCCCCChHHHHHHhcCCCcccccccCCCCCC---CCCeEEEEEEEEEeeCCC-CCeeccccchhhhccCCCCcCCCCc
Q 008747 311 EFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPT-GRVHKGLCSTWMKNSLPMEKSNDCS 386 (555)
Q Consensus 311 ~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~i~v~~v~~~~~~-g~~~~G~~S~~L~~~~~~~~~~~~~ 386 (555)
.+..+|+|||+|+|.. .++.++|+|+.+.+.++. |....|.||+||+++.+|+
T Consensus 73 -----------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~Gd------ 129 (304)
T 2bmw_A 73 -----------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGS------ 129 (304)
T ss_dssp -----------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCTTC------
T ss_pred -----------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCCCC------
Confidence 0136799999999852 357899998876554433 4456799999999976653
Q ss_pred eeeEEEecCCC-CCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhh--c---CCCCCeEEEEeccCCCCCCCcHHHHHH
Q 008747 387 WAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA--G---AELGPSLLFFGCRNRKMDYIYEDELNN 460 (555)
Q Consensus 387 ~v~v~~~~~~F-~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~--~---~~~~~~~L~~G~R~~~~d~ly~del~~ 460 (555)
.+.|.+|.|.| .+|.+..+|+||||+|||||||+||++++...... + ...++++||||||+.+ |++|.+||++
T Consensus 130 ~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~~el~~ 208 (304)
T 2bmw_A 130 EVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEE 208 (304)
T ss_dssp EEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGG-GCTTHHHHHH
T ss_pred EEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChH-hcchHHHHHH
Confidence 36788887775 46655678999999999999999999997654211 0 0136899999999986 9999999999
Q ss_pred HHHcCC-cceEEEEEccCCC----CcccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCH
Q 008747 461 FVQSGA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDS 534 (555)
Q Consensus 461 ~~~~~~-~~~l~~a~Sr~~~----~k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~ 534 (555)
+.+.+. ..+++.++||+.. .++|||+.+.++.+.+++++ ..++.||+||| +.|+++|+++|.+++.+.+ ++
T Consensus 209 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~~~~~g-~~- 285 (304)
T 2bmw_A 209 IQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGP-PPMEEGIDAALSAAAAKEG-VT- 285 (304)
T ss_dssp HHHHCTTTEEEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-TTHHHHHHHHHHHHHHTTT-CC-
T ss_pred HHHhCCCcEEEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHHHcC-cc-
Confidence 987653 4579999999742 47899999998877777766 35789999999 8999999999999998754 43
Q ss_pred HHHHHHHHHHHHCCCEEEeeC
Q 008747 535 SKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 535 ~~a~~~~~~l~~~~Ry~~dvw 555 (555)
+++++++|+++|||++|||
T Consensus 286 --~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 286 --WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp --HHHHHHHHHHTTCEEEEEC
T ss_pred --HHHHHHHHHHcCCeEEecC
Confidence 6789999999999999999
No 11
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=100.00 E-value=5.1e-35 Score=309.25 Aligned_cols=273 Identities=25% Similarity=0.429 Sum_probs=218.9
Q ss_pred cCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCC
Q 008747 150 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 229 (555)
Q Consensus 150 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~ 229 (555)
+....++.++|+.+++++..++.+++++|+|+.++....|+||+++.|.+++.+ .
T Consensus 117 ~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~------------------------~- 171 (402)
T 2b5o_A 117 YRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED------------------------K- 171 (402)
T ss_dssp SCSSSCEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE------------------------T-
T ss_pred ccCCCCEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC------------------------c-
Confidence 345567899999999999888889999999998754589999999998766411 0
Q ss_pred CCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHH
Q 008747 230 GTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVM 309 (555)
Q Consensus 230 ~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl 309 (555)
.|
T Consensus 172 -----------------------------------------------------------~g------------------- 173 (402)
T 2b5o_A 172 -----------------------------------------------------------NG------------------- 173 (402)
T ss_dssp -----------------------------------------------------------TT-------------------
T ss_pred -----------------------------------------------------------CC-------------------
Confidence 00
Q ss_pred hhCCCCCCChHHHHHHhcCCCcccccccCCCCCC---CCCeEEEEEEEEEeeCC-CCCeeccccchhhhccCCC-CcCCC
Q 008747 310 SEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTP-TGRVHKGLCSTWMKNSLPM-EKSND 384 (555)
Q Consensus 310 ~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~i~v~~v~~~~~-~g~~~~G~~S~~L~~~~~~-~~~~~ 384 (555)
.+..+|+|||+|+|.. .++.++|+|+.+.+.++ .++...|.||+||+++.+| +
T Consensus 174 ------------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G~d---- 231 (402)
T 2b5o_A 174 ------------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTD---- 231 (402)
T ss_dssp ------------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCTTCC----
T ss_pred ------------------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCCCCc----
Confidence 0135799999999863 25789999987655443 2455679999999997665 4
Q ss_pred CceeeEEEecCCC-CCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc-CCCCCeEEEEeccCCCCCCCcHHHHHHHH
Q 008747 385 CSWAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG-AELGPSLLFFGCRNRKMDYIYEDELNNFV 462 (555)
Q Consensus 385 ~~~v~v~~~~~~F-~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~del~~~~ 462 (555)
.+.|..|.|.| .+|.+..+|+||||+|||||||++|++++......+ ...++++||||||+++ |++|.+||+++.
T Consensus 232 --~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~eL~~l~ 308 (402)
T 2b5o_A 232 --DVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTA-NILYKDDFEKMA 308 (402)
T ss_dssp --CEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGG-GCTTHHHHHHHH
T ss_pred --eEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHH-HhHHHHHHHHHH
Confidence 36788887876 566566789999999999999999999986532110 1136899999999986 999999999998
Q ss_pred HcCC-cceEEEEEccCCC----CcccccchhhccHHHHHHHHh-CCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHH
Q 008747 463 QSGA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSK 536 (555)
Q Consensus 463 ~~~~-~~~l~~a~Sr~~~----~k~yVq~~l~~~~~~v~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~ 536 (555)
+.+. ..+++.++||++. .++|||++|.+..+.+++++. .++.||+||| +.|+++|.++|.+++.+.+. .
T Consensus 309 ~~~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP-~~M~~~v~~~L~~~g~~~g~----~ 383 (402)
T 2b5o_A 309 AENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGL-KGMQPPIDETFTAEAEKRGL----N 383 (402)
T ss_dssp HHCTTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-GGGHHHHHHHHHHHHHHTTC----C
T ss_pred HhCCCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECC-HHHHHHHHHHHHHHHHHcCc----h
Confidence 8754 5589999999743 478999999988888888773 5789999999 89999999999999988764 4
Q ss_pred HHHHHHHHHHCCCEEEeeC
Q 008747 537 AESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 537 a~~~~~~l~~~~Ry~~dvw 555 (555)
+++++++|+++|||++|||
T Consensus 384 ~~~~~~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 384 WEEMRRSMKKEHRWHVEVY 402 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEecC
Confidence 7789999999999999999
No 12
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=3.8e-35 Score=300.13 Aligned_cols=226 Identities=26% Similarity=0.450 Sum_probs=184.7
Q ss_pred ChHHHHHHhcCC-------CcccccccCCCCCC---CCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCce
Q 008747 318 PLGVFFAAIVPR-------LQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSW 387 (555)
Q Consensus 318 p~~~ll~~~~p~-------~~pR~YSIaSsp~~---~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~ 387 (555)
.+||++.+.+|. +.+|+|||+|+|.. +++.++|+|+.+.+.++.|+.+.|.||+||+++.+|+ .
T Consensus 67 ~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd------~ 140 (310)
T 3vo2_A 67 REGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGA------D 140 (310)
T ss_dssp CTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCTTC------E
T ss_pred cCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCCCC------E
Confidence 357776544443 25899999999963 3578999998876666777788899999999976654 3
Q ss_pred eeEEEecCCCC-CCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc-CCCCCeEEEEeccCCCCCCCcHHHHHHHHHcC
Q 008747 388 APIFVRQSNFK-LPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG-AELGPSLLFFGCRNRKMDYIYEDELNNFVQSG 465 (555)
Q Consensus 388 v~v~~~~~~F~-lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~ 465 (555)
+.|..+.|.|. +|.+..+|+||||+|||||||++|++++....... ...++++||||||+.+ |++|.+||+++.+.+
T Consensus 141 v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~-d~~~~~el~~l~~~~ 219 (310)
T 3vo2_A 141 VKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSD-SLLYKEELEKMKEMA 219 (310)
T ss_dssp EEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGG-GCCSHHHHHHHHHHC
T ss_pred EEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChh-hcccHHHHHHHHHhC
Confidence 67788877755 56566789999999999999999999987432111 1136799999999987 999999999999876
Q ss_pred C-cceEEEEEccCCC----CcccccchhhccHHHHHHHHh-CCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHH
Q 008747 466 A-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAES 539 (555)
Q Consensus 466 ~-~~~l~~a~Sr~~~----~k~yVq~~l~~~~~~v~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~ 539 (555)
. ..+++.++||++. .++|||+.+.+..+.+++++. +++.||+||| +.|+++|+++|.+++.+.+ + ++++
T Consensus 220 ~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp-~~M~~~v~~~L~~~~~~~g-~---~~~~ 294 (310)
T 3vo2_A 220 PDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGL-KGMEKGIDDIMLNLAAKDG-I---DWMQ 294 (310)
T ss_dssp TTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEES-TTHHHHHHHHHHHHHHHTT-C---CHHH
T ss_pred CCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCC-HHHHHHHHHHHHHHHHHcC-c---CHHH
Confidence 4 5589999999753 578999999998888888774 6899999999 8999999999999998865 3 5789
Q ss_pred HHHHHHHCCCEEEeeC
Q 008747 540 MVKNLQMTGRYLRDVW 555 (555)
Q Consensus 540 ~~~~l~~~~Ry~~dvw 555 (555)
|+++|+++|||++|||
T Consensus 295 ~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 295 YKKQLKKGEQWNVEVY 310 (310)
T ss_dssp HHHHHHHTTSEEEEEC
T ss_pred HHHHHHHCCceEEecC
Confidence 9999999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=100.00 E-value=8.7e-34 Score=290.50 Aligned_cols=276 Identities=21% Similarity=0.329 Sum_probs=209.5
Q ss_pred CCCCeeeEEEeeeecCCCCCCCc---------EEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEE
Q 008747 152 AQHPCRSNVAVRKELHTPSSDRS---------CTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFS 222 (555)
Q Consensus 152 ~~~~~~~~v~~~~~l~~~~~~~~---------~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~ 222 (555)
...++.++|+.+++|++.++.++ +++|+|+.++..+.|+||+++.|.++|....
T Consensus 18 ~~~~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~----------------- 80 (314)
T 2rc5_A 18 KSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE----------------- 80 (314)
T ss_dssp TTBCEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHH-----------------
T ss_pred CCCCEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccc-----------------
Confidence 34577899999999998777666 9999999875558999999999988764210
Q ss_pred EeeCCCCCCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcC
Q 008747 223 LHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQ 302 (555)
Q Consensus 223 i~~~~~~~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~ 302 (555)
+. +. .+
T Consensus 81 -------g~------------~~--------------------------------------~~----------------- 86 (314)
T 2rc5_A 81 -------KK------------AK--------------------------------------GL----------------- 86 (314)
T ss_dssp -------HH------------HT--------------------------------------TC-----------------
T ss_pred -------cC------------cc--------------------------------------ch-----------------
Confidence 00 00 00
Q ss_pred CCHHHHHhhCCCCCCChHHHHHHhcCCCcccccccCCCCCC---CCCeEEEEEEEEEeeCCCCCe-eccccchhhhccCC
Q 008747 303 RSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNSLP 378 (555)
Q Consensus 303 ~~~~dvl~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~i~v~~v~~~~~~g~~-~~G~~S~~L~~~~~ 378 (555)
.+| ++.+|+|||+|+|.. .++.++|+|+.+.+.++.|+. +.|.+|+||+++.+
T Consensus 87 -------~~~----------------~~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~ 143 (314)
T 2rc5_A 87 -------ADV----------------GYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKP 143 (314)
T ss_dssp -------SCC----------------BCCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCT
T ss_pred -------hhc----------------CCCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCC
Confidence 011 157899999999852 357899988876444444443 46999999999765
Q ss_pred CCcCCCCceeeEEEecCCCC-CCC-CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHH
Q 008747 379 MEKSNDCSWAPIFVRQSNFK-LPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYED 456 (555)
Q Consensus 379 ~~~~~~~~~v~v~~~~~~F~-lp~-~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~d 456 (555)
|+ .+.|..+.|.|. +|. +..+|+||||+|||||||++|++++.... .....++++||||||+++ |++|.+
T Consensus 144 Gd------~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~-~~~~~~~v~l~~g~r~~~-d~~~~~ 215 (314)
T 2rc5_A 144 GD------EVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK-LIKFTGNITLVYGAPYSD-ELVMMD 215 (314)
T ss_dssp TC------EEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTC-SSCBCSCEEEEEEESSGG-GSCSHH
T ss_pred cC------EEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhc-ccCCCCcEEEEEEeCCHH-HHhHHH
Confidence 43 367888888765 454 45789999999999999999999986432 111236899999999997 999999
Q ss_pred HHHHHHHcCCcceEEEEEccCCC-----CcccccchhhccHHHHHHHHhCCCEEEEe-cCCcchHHHHHHHHHHHHHHcC
Q 008747 457 ELNNFVQSGALSQLIVAFSREGP-----TKEYVQHKMMEKSSDIWNMLSEGAYLYVC-GDAKSMARDVHRTLHTIVQEQG 530 (555)
Q Consensus 457 el~~~~~~~~~~~l~~a~Sr~~~-----~k~yVq~~l~~~~~~v~~~l~~~~~iyvC-G~~~~M~~~v~~~L~~i~~~~~ 530 (555)
||+++.+.....++++++||+.. .++|||+.+.+..+.+.+.+.....+|+| || +.|+++|++.|.+++. .
T Consensus 216 el~~l~~~~~~~~~~~~~s~~~~~~~~g~~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp-~~m~~~v~~~L~~~g~--~ 292 (314)
T 2rc5_A 216 YLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGP-KGMEKGVIEEIQKISG--N 292 (314)
T ss_dssp HHHHHHHHHSSEEEEEEETTTCBCTTTSSBCCHHHHHHHTHHHHHHHHHHTCEEEEEESS-TTTHHHHHHHHHHHHT--C
T ss_pred HHHHHHHhCCcEEEEEEECCCCCcccCCCceehhHHHHHhHHHHHHHhhcCCeEEEeCCc-HHHHHHHHHHHHHHHh--c
Confidence 99999876445589999999742 46899999998777777666333345999 98 8999999999999865 3
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEeeC
Q 008747 531 SLDSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 531 ~~~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
++ .++.|+.+|+++|||++|+|
T Consensus 293 ~i---~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 293 TG---TYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp CS---CHHHHHHHHHHTTCEEEEEC
T ss_pred cc---hHHHHHHHHHHCCCEEEecC
Confidence 33 46789999999999999999
No 14
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=8.3e-34 Score=290.25 Aligned_cols=227 Identities=28% Similarity=0.433 Sum_probs=178.3
Q ss_pred CChHHHHHHhcCC---------CcccccccCCCCCC---CCCeEEEEEEEEEeeCCC-C---CeeccccchhhhccCCCC
Q 008747 317 PPLGVFFAAIVPR---------LQPRYYSISSSPRV---APSRIHVTCALVYEKTPT-G---RVHKGLCSTWMKNSLPME 380 (555)
Q Consensus 317 ~p~~~ll~~~~p~---------~~pR~YSIaSsp~~---~~~~i~i~v~~v~~~~~~-g---~~~~G~~S~~L~~~~~~~ 380 (555)
..+||++.+.+|. ..+|+|||+|+|.. +++.++|+|+.+.+..+. + ....|.+|+||+++.+|+
T Consensus 61 ~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd 140 (311)
T 3lo8_A 61 YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGD 140 (311)
T ss_dssp CCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTTC
T ss_pred ccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCCcC
Confidence 3467777555554 26899999999964 247899998865332221 1 235699999999976643
Q ss_pred cCCCCceeeEEEecCCCCCCC--CCCCCeEEEccCCccchhHHHHHHHHHHHhhcC-CCCCeEEEEeccCCCCCCCcHHH
Q 008747 381 KSNDCSWAPIFVRQSNFKLPA--DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGA-ELGPSLLFFGCRNRKMDYIYEDE 457 (555)
Q Consensus 381 ~~~~~~~v~v~~~~~~F~lp~--~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~-~~~~~~L~~G~R~~~~d~ly~de 457 (555)
.+.+..+.|.|.+.. +..+|+||||+|||||||++|++++......+. ..++++||||||+.+ |++|.+|
T Consensus 141 ------~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~~e 213 (311)
T 3lo8_A 141 ------KIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSD-SLLYDEE 213 (311)
T ss_dssp ------EEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGG-GCSSHHH
T ss_pred ------EEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChH-HhhHHHH
Confidence 367888888876543 357899999999999999999999865321111 125799999999987 9999999
Q ss_pred HHHHHHcCC-cceEEEEEccCCC----CcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 008747 458 LNNFVQSGA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSL 532 (555)
Q Consensus 458 l~~~~~~~~-~~~l~~a~Sr~~~----~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~ 532 (555)
|+++.+.+. ..+++.++||++. .++||++.+.+..+.+++++..++.||+||| +.|+++|+++|.+++.+.+
T Consensus 214 l~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~~~g-- 290 (311)
T 3lo8_A 214 FTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGL-KGMMPGIQDTLKKVAERRG-- 290 (311)
T ss_dssp HHHHHHHCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEEC-GGGHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHhCCCcEEEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHHhcc--
Confidence 999998764 5589999999753 4799999999887777777678899999999 8999999999999998765
Q ss_pred CHHHHHHHHHHHHHCCCEEEeeC
Q 008747 533 DSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 533 ~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
++|++|+++|+++|||++|||
T Consensus 291 --~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 291 --ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp --CCHHHHHHHHHHTTCEEEEEC
T ss_pred --HHHHHHHHHHHHCCcEEEecC
Confidence 367899999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=100.00 E-value=9.8e-32 Score=275.40 Aligned_cols=290 Identities=22% Similarity=0.364 Sum_probs=204.0
Q ss_pred cCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCC
Q 008747 150 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 229 (555)
Q Consensus 150 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~~~~V~~~l~~l~l~~~~~~~i~~~~~~ 229 (555)
|+..+|+.++|+.+.+|+.++...+|+||+|+.+ ..+.|.+|..++|.|+..+..=. .+
T Consensus 10 ~~~~~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~GQ~~~i~~~~~~~~~~-----~~--------------- 68 (316)
T 3jqq_A 10 YTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHN-GLFKYLEGHTCGIIPYYNELDNN-----PN--------------- 68 (316)
T ss_dssp SCSSSCEEEEEEEEEECSCTTCSCCEEEEEEECT-TCCCCCTTCEEEECTTCC---------------------------
T ss_pred ecCCCCEEEEEEeeEEccCCCCCCceEEEEEeCC-CCcceecCcEeEEECCCcccccc-----cc---------------
Confidence 5567899999999999999888899999999985 46999999999999987654200 00
Q ss_pred CCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHH
Q 008747 230 GTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVM 309 (555)
Q Consensus 230 ~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~dvl 309 (555)
++.+.+- + ++-++. ++ + +..++
T Consensus 69 ------~~~~~~~------~----~~~~~~------------~~----------------~-----------h~~~~--- 90 (316)
T 3jqq_A 69 ------NQINKDH------N----IINTTN------------HT----------------N-----------HNNIA--- 90 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------ccccccc------c----cccccc------------cc----------------c-----------ccccc---
Confidence 0000000 0 000000 00 0 00000
Q ss_pred hhCCCCCCChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCC---CCCeeccccchhhhccCCCCcCCCCc
Q 008747 310 SEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP---TGRVHKGLCSTWMKNSLPMEKSNDCS 386 (555)
Q Consensus 310 ~~f~s~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~---~g~~~~G~~S~~L~~~~~~~~~~~~~ 386 (555)
...+-+...+|+|||||+|.. +.++|+|+.+.+..+ .++.+.|.||+||.++.+|+
T Consensus 91 -------------~~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd------ 149 (316)
T 3jqq_A 91 -------------LSHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKIND------ 149 (316)
T ss_dssp -------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCTTC------
T ss_pred -------------cccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCC------
Confidence 001124578999999999973 679998887643321 23456799999998876654
Q ss_pred eeeEEEecCCCCCCCC---CCCCeEEEccCCccchhHHHHHHHHHHHhh------cCCCCCeEEEEeccCCCCCCCcHHH
Q 008747 387 WAPIFVRQSNFKLPAD---AKVPIIMIGPGTGLAPFRGFLQERFALQEA------GAELGPSLLFFGCRNRKMDYIYEDE 457 (555)
Q Consensus 387 ~v~v~~~~~~F~lp~~---~~~piimIa~GTGiAPf~s~l~~~~~~~~~------~~~~~~~~L~~G~R~~~~d~ly~de 457 (555)
.+.|..+.|.|.++.+ ..+|+||||+|||||||+||++++...... +...++++||||||+++ |++|.+|
T Consensus 150 ~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~e 228 (316)
T 3jqq_A 150 DIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNED-SILYLNE 228 (316)
T ss_dssp EEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGG-GCTTHHH
T ss_pred EEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHH-HhhcHHH
Confidence 3678888899999876 378999999999999999999998754211 01247899999999997 9999999
Q ss_pred HHHHHHcCC-cceEEEEEccCCC---CcccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 008747 458 LNNFVQSGA-LSQLIVAFSREGP---TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSL 532 (555)
Q Consensus 458 l~~~~~~~~-~~~l~~a~Sr~~~---~k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~ 532 (555)
|+++.+... ..+++.++||++. .++|||+.+.+..+.+++++ ..++.||+||| +.|++++++.|.+.. ++
T Consensus 229 L~~l~~~~~~~~~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP-~~m~~~v~~~l~~~G----~~ 303 (316)
T 3jqq_A 229 LEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGK-KSIRYKVMDILKSHD----QF 303 (316)
T ss_dssp HHHHHHHCTTTEEEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEEC-STHHHHHHHHHHC--------
T ss_pred HHHHHHhCCCcEEEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCC-HHHHHHHHHHHHHcC----CC
Confidence 999988743 4578999999743 67999999999888888876 46899999999 899999988776543 23
Q ss_pred CHHHHHHHHHHHHHCCCEEEeeC
Q 008747 533 DSSKAESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 533 ~~~~a~~~~~~l~~~~Ry~~dvw 555 (555)
+. ...+|++.|+|
T Consensus 304 ~~----------v~~~rih~E~f 316 (316)
T 3jqq_A 304 DE----------KKKKRVHVEVY 316 (316)
T ss_dssp CH----------HHHTTEEEEEC
T ss_pred cc----------cccccEEEEeC
Confidence 22 34578888876
No 16
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.91 E-value=1.4e-24 Score=214.76 Aligned_cols=183 Identities=17% Similarity=0.262 Sum_probs=142.1
Q ss_pred CChHHHHHHhcCC-CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhh-ccCCCCcCCCCceeeEEEec
Q 008747 317 PPLGVFFAAIVPR-LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQ 394 (555)
Q Consensus 317 ~p~~~ll~~~~p~-~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~v~v~~~~ 394 (555)
..+||++.+.+|. ...|+|||+|+|.. .+.++|+|+.+ ..|.+|+||+ ++.+|+ .+.|..+.
T Consensus 44 ~~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk~~---------~~G~~s~~l~~~l~~Gd------~v~v~gP~ 107 (250)
T 1tvc_A 44 FEPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIRVL---------PEGRFSDYLRNDARVGQ------VLSVKGPL 107 (250)
T ss_dssp CCSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEECCC---------TTSSSHHHHHHHSSSSS------EEEEEEEE
T ss_pred cCCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEEEEC---------CCCCchHHHHhcCCCCC------EEEEEcCc
Confidence 3578877555565 57899999999863 47788777533 2488999996 666643 36788888
Q ss_pred CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEE
Q 008747 395 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 474 (555)
Q Consensus 395 ~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~ 474 (555)
|.|.++.+..+++||||+|||||||++|+++..... ...+++|+||+|+.+ |++|.+||+++.+.....+++.++
T Consensus 108 G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~ 182 (250)
T 1tvc_A 108 GVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWT----APNETRIYFGVNTEP-ELFYIDELKSLERSMRNLTVKACV 182 (250)
T ss_dssp CCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHT----CCSCEEEEEECSSST-TCCCHHHHHHHHHHSSSCEEEECC
T ss_pred cccccCccCCceEEEEEeccCHHHHHHHHHHHHhcC----CCceEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEEe
Confidence 999988665689999999999999999999987642 236899999999997 999999999998755555788889
Q ss_pred ccCCC----CcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 475 SREGP----TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 475 Sr~~~----~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
||+.. .++||++.+.+. +.+. ..+..||+||| +.|+++|++.|.+.
T Consensus 183 s~~~~~~~g~~g~v~~~l~~~---~~~~-~~~~~vyvCGp-~~m~~~v~~~l~~~ 232 (250)
T 1tvc_A 183 WHPSGDWEGEQGSPIDALRED---LESS-DANPDIYLCGP-PGMIDAACELVRSR 232 (250)
T ss_dssp SSCSSCCSSSSSSSSHHHHHH---HHHS-SSSSEEEEESS-HHHHHHHHHHHHHH
T ss_pred ccCCCCcCCccceehHHHHhh---hhcc-cCCcEEEEeCC-HHHHHHHHHHHHHc
Confidence 98532 467888877642 1111 25789999999 89999999988754
No 17
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=99.90 E-value=3.2e-24 Score=205.85 Aligned_cols=102 Identities=29% Similarity=0.522 Sum_probs=96.2
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.+||++||||+|++|+||+.|+++|.... ..+++++||||||||++|++||.+++.++++|+++||++|+|++++|+
T Consensus 89 ~vI~~tsTyG~Ge~Pdna~~F~~~L~~~~---~~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l~~~g~~D~ 165 (219)
T 3hr4_A 89 LLLVVTSTFGNGDCPGNGEKLKKSLFMLK---ELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPMGEGDE 165 (219)
T ss_dssp EEEEEEECBTTTBCCGGGHHHHHHHHHCC---CCSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEET
T ss_pred eEEEEEeccCCCcCCHHHHHHHHHHHhcc---hhhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEeeCCEEEec
Confidence 68999999999999999999999998752 248999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhCC
Q 008747 82 DQCIEDDFSAWRELVWPELDNLLRD 106 (555)
Q Consensus 82 ~~~~~~~~~~W~~~l~~~l~~~~~~ 106 (555)
..+.+++|++|++.+|++|.+.++.
T Consensus 166 ~~~~e~~~~~W~~~l~~~l~~~~~~ 190 (219)
T 3hr4_A 166 LSGQEDAFRSWAVQTFKAACETFDV 190 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHHHHHHHHHHHHcCC
Confidence 8899999999999999999999864
No 18
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.90 E-value=1.8e-24 Score=211.26 Aligned_cols=181 Identities=17% Similarity=0.200 Sum_probs=136.6
Q ss_pred CChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchh-hhccCCCCcCCCCceeeEEEecC
Q 008747 317 PPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTW-MKNSLPMEKSNDCSWAPIFVRQS 395 (555)
Q Consensus 317 ~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~-L~~~~~~~~~~~~~~v~v~~~~~ 395 (555)
..+||++.+.+|....|+|||+|+|.. .+.++|+|+.+ ..|.+|++ +.++.+|+ .+.+..+.|
T Consensus 30 ~~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~~---------~~G~~s~~~~~~l~~Gd------~v~v~gP~G 93 (232)
T 1qfj_A 30 FRAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGAS---------EINLYAKAVMDRILKDH------QIVVDIPHG 93 (232)
T ss_dssp CCTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHHHS------EEEEEEEEC
T ss_pred cCCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEEc---------cCCchhHHHHHhCCCCC------EEEEeCCcc
Confidence 457888866567778999999999863 46888887654 13666776 55555543 367888889
Q ss_pred CCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEc
Q 008747 396 NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFS 475 (555)
Q Consensus 396 ~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~S 475 (555)
.|.++.+..+++||||+|||||||+++++++.... ...+++|+||+|+.+ |++|.+||+++.+.....+++.++|
T Consensus 94 ~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s 168 (232)
T 1qfj_A 94 EAWLRDDEERPMILIAGGTGFSYARSILLTALARN----PNRDITIYWGGREEQ-HLYDLCELEALSLKHPGLQVVPVVE 168 (232)
T ss_dssp SCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHC----TTCCEEEEEEESSGG-GCTTHHHHHHHHHHCTTEEEEEEES
T ss_pred ceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhcC----CCCcEEEEEeeCCHH-HhhhHHHHHHHHHHCCCeEEEEEEc
Confidence 99987666789999999999999999999987642 236899999999997 9999999999987655568888999
Q ss_pred cCCC----CcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHH-HH
Q 008747 476 REGP----TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTL-HT 524 (555)
Q Consensus 476 r~~~----~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L-~~ 524 (555)
++.. .++||++.+.+.. .+ ..+..+|+||| +.|+++|++.| .+
T Consensus 169 ~~~~~~~g~~g~v~~~~~~~~---~~--~~~~~vyvCGp-~~m~~~v~~~l~~~ 216 (232)
T 1qfj_A 169 QPEAGWRGRTGTVLTAVLQDH---GT--LAEHDIYIAGR-FEMAKIARDLFCSE 216 (232)
T ss_dssp SCCTTCCSEESCHHHHHHHHC---SC--CTTCEEEEESC-HHHHHHHHHHHHHH
T ss_pred CCCCCcCCceeeHHHHHHHhc---CC--ccccEEEEECC-HHHHHHHHHHHHHH
Confidence 8643 3577777665420 01 24689999999 89999999887 54
No 19
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.90 E-value=1.1e-23 Score=212.81 Aligned_cols=182 Identities=18% Similarity=0.348 Sum_probs=135.4
Q ss_pred CCcccccccCCCCCCCCCeEEEEEEEEEee--CC-C---CCeeccccchhhhccCCCCcCCCCceeeEEEecCCCCCCCC
Q 008747 329 RLQPRYYSISSSPRVAPSRIHVTCALVYEK--TP-T---GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPAD 402 (555)
Q Consensus 329 ~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~--~~-~---g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~~~F~lp~~ 402 (555)
...+|+|||+|+|.. .+.++|+|+++... +. . .+...|.+|+||+++.+|+ .+.|..+.|.|.++ +
T Consensus 83 ~~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~Gd------~v~v~gP~G~f~~~-~ 154 (290)
T 2r6h_A 83 EETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGD------KVMMSGPYGDFHIQ-D 154 (290)
T ss_dssp SCEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCTTC------EEEEEEEECCCCCC-S
T ss_pred CCcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCCCC------EEEEEecccCCcCC-C
Confidence 456899999999863 47888887653110 00 0 0124699999999976643 36788888999886 4
Q ss_pred CCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCC---
Q 008747 403 AKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP--- 479 (555)
Q Consensus 403 ~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~--- 479 (555)
..+|+||||+|||||||++|++++.... ....+++||||+|+++ |++|.+||+++.+.+...+++.++||+..
T Consensus 155 ~~~~~vliagGtGitP~~s~l~~~~~~~---~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~ 230 (290)
T 2r6h_A 155 TDAEMLYIGGGAGMAPLRAQILHLFRTL---KTGRKVSYWYGARSKN-EIFYEEDFREIEREFPNFKFHIALSDPQPEDN 230 (290)
T ss_dssp SSCEEEEEEEGGGHHHHHHHHHHHHHTS---CCCSCEEEEEEESSGG-GCCSHHHHHHHHHHCTTEEEEEEESSCCGGGC
T ss_pred CCCeEEEEECccCHHHHHHHHHHHHHhc---CCCCcEEEEEEcCCHH-HHHHHHHHHHHHHhCCCeEEEEEEccCCcccC
Confidence 5689999999999999999999876532 1236899999999997 99999999999876655689999998642
Q ss_pred ---CcccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 480 ---TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 480 ---~k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
.++||++.+.+.. +.+.. ..++.||+||| +.|+++|++.|.+.
T Consensus 231 ~~g~~g~v~~~~~~~~--l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 231 WTGYVGFIHQVIYDNY--LKDHDAPEDIEYYMCGP-GPMANAVKGMLENL 277 (290)
T ss_dssp CCSCBSCHHHHHHHHT--TTTCSCGGGEEEEEECC-HHHHHHHHHHHHHH
T ss_pred CCCeeEecCHHHHHhH--HhhccCcCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 3678887663320 11101 23678999999 89999999988764
No 20
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.89 E-value=2.4e-24 Score=212.67 Aligned_cols=188 Identities=18% Similarity=0.211 Sum_probs=140.1
Q ss_pred CCChHHHHHHhcCC---CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEE-
Q 008747 316 KPPLGVFFAAIVPR---LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF- 391 (555)
Q Consensus 316 ~~p~~~ll~~~~p~---~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~- 391 (555)
...+||++.+.+|. ...|+|||+|+|.. +.++|+|+.+ ..|.+|+||+++.+|+ .+.+.
T Consensus 30 ~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~ 92 (248)
T 1fdr_A 30 PFTAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVTV---------PDGKLSPRLAALKPGD------EVQVVS 92 (248)
T ss_dssp CCCTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEECC---------TTCSSHHHHHTCCTTC------EEEEES
T ss_pred CcCCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEEe---------CCCchhhHHHhCCCcC------EEEEec
Confidence 34578887555452 45799999999863 6788776533 2488999999876654 36677
Q ss_pred EecCCCCCCCCC-CCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcC-Ccce
Q 008747 392 VRQSNFKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSG-ALSQ 469 (555)
Q Consensus 392 ~~~~~F~lp~~~-~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~-~~~~ 469 (555)
.+.|.|.++.+. .++++|||+|||||||+++++++... ....+++|+||+|+.+ |++|.+||+++.+.. ...+
T Consensus 93 gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~----~~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 167 (248)
T 1fdr_A 93 EAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDL----DRFKNLVLVHAARYAA-DLSYLPLMQELEKRYEGKLR 167 (248)
T ss_dssp SCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSC----TTCSEEEEEEEESSGG-GCTTHHHHHHHHHHTTTSEE
T ss_pred CCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhh----CCCCcEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcEE
Confidence 677889887553 68999999999999999999986432 1136899999999987 999999999998653 2347
Q ss_pred EEEEEccCCC---CcccccchhhccH-HHHHHH-H-hCCCEEEEecCCcchHHHHHHHH-HHHH
Q 008747 470 LIVAFSREGP---TKEYVQHKMMEKS-SDIWNM-L-SEGAYLYVCGDAKSMARDVHRTL-HTIV 526 (555)
Q Consensus 470 l~~a~Sr~~~---~k~yVq~~l~~~~-~~v~~~-l-~~~~~iyvCG~~~~M~~~v~~~L-~~i~ 526 (555)
++.++||++. .+++|++.+.+.. +..... . ..+..+|+||| +.|+++|++.| .+.+
T Consensus 168 ~~~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~~G 230 (248)
T 1fdr_A 168 IQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGN-PQMVRDTQQLLKETRQ 230 (248)
T ss_dssp EEEEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEEC-HHHHHHHHHHHHHHHC
T ss_pred EEEEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCC-HHHHHHHHHHHHHHcC
Confidence 8889998754 3688998876642 111110 1 25689999999 89999999988 6643
No 21
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.89 E-value=1.2e-23 Score=217.35 Aligned_cols=180 Identities=23% Similarity=0.287 Sum_probs=142.0
Q ss_pred CChHHHHHHhcCC-CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhh-ccCCCCcCCCCceeeEEEec
Q 008747 317 PPLGVFFAAIVPR-LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQ 394 (555)
Q Consensus 317 ~p~~~ll~~~~p~-~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~v~v~~~~ 394 (555)
..+||++.+.+|. ..+|+|||+|+|. .+.++|+|+.+ ..|.+|+||+ ++.+|+ .+.+..|.
T Consensus 139 ~~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~~---------~~G~~S~~L~~~l~~Gd------~v~v~gP~ 201 (338)
T 1krh_A 139 FLAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRNV---------PQGKMSEYLSVQAKAGD------KMSFTGPF 201 (338)
T ss_dssp CCTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEECC---------TTCHHHHHHHTTCCTTC------EEEEEEEE
T ss_pred cCCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEEEc---------CCCCchhhHhhccCCCC------EEEEECCc
Confidence 3578887655565 5689999999986 57888877643 2488999996 565543 36788888
Q ss_pred CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEE
Q 008747 395 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 474 (555)
Q Consensus 395 ~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~ 474 (555)
|.|.++.+ .+|+||||+|||||||++|++++.... ...+++||||+|+++ |++|.+||+++.+.....+++.++
T Consensus 202 G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~----~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~ 275 (338)
T 1krh_A 202 GSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKG----SEHPVRLVFGVTQDC-DLVALEQLDALQQKLPWFEYRTVV 275 (338)
T ss_dssp CSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHC----CSSCEEEEEEESSGG-GCCCHHHHHHHHHHCTTEEEEEEE
T ss_pred cceEeCCC-CceEEEEEccccHhHHHHHHHHHHHcC----CCCeEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEEE
Confidence 99998765 489999999999999999999987642 236899999999997 999999999998766556788899
Q ss_pred ccCCC---CcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 475 SREGP---TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 475 Sr~~~---~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
|+++. .++||++.+.+.. +. ..+..||+||| +.|++++++.|.+.
T Consensus 276 s~~~~~~~~~g~v~~~l~~~~--~~---~~~~~vy~CGp-~~m~~~v~~~l~~~ 323 (338)
T 1krh_A 276 AHAESQHERKGYVTGHIEYDW--LN---GGEVDVYLCGP-VPMVEAVRSWLDTQ 323 (338)
T ss_dssp TTCCSSSSEESCSGGGCCGGG--GG---GGCSEEEEEEE-HHHHHHHHHHHHHH
T ss_pred ecCCCCCCccCccCHHHHHhh--cc---cCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 98654 3689998887421 11 25679999999 89999999988764
No 22
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.89 E-value=1.2e-23 Score=206.74 Aligned_cols=182 Identities=16% Similarity=0.286 Sum_probs=138.3
Q ss_pred CChHHHHHHhcCCC-----cccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhc-cCCCCcCCCCceeeE
Q 008747 317 PPLGVFFAAIVPRL-----QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAPI 390 (555)
Q Consensus 317 ~p~~~ll~~~~p~~-----~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~~v~v 390 (555)
..+||++.+.+|.. .+|+|||+|+|. .+.++|+|+.+ ..++...|.+|+||++ +.+|+ .+.+
T Consensus 34 ~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~----~~~~~~~G~~S~~l~~~l~~G~------~v~v 101 (243)
T 4eh1_A 34 YQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKRE----GVGSDNPGLVSHYLHNNVKVGD------SVKL 101 (243)
T ss_dssp CCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECT----TTTSSSCCHHHHHHHHHCCTTC------EEEE
T ss_pred cCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEe----ecCCCCCCeehhHHHhcCCCCC------EEEE
Confidence 45788876555532 469999999985 36787766532 1123356999999974 65543 3678
Q ss_pred EEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceE
Q 008747 391 FVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 470 (555)
Q Consensus 391 ~~~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l 470 (555)
..+.|.|.++ +..+|+||||+|||||||++|++++..... ..++|+||+|+.+ |++|.+||+++.+.+ ..++
T Consensus 102 ~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~~-----~~v~l~~~~r~~~-~~~~~~el~~l~~~~-~~~~ 173 (243)
T 4eh1_A 102 YAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQNK-----SGVTYLYACNSAK-EHTFAQETAQLIAQQ-GWMQ 173 (243)
T ss_dssp EEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTTC-----CSEEEEEEESSGG-GCTTHHHHHHHHHHH-TCEE
T ss_pred EccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHcCC-----CeEEEEEEeCChh-hhhHHHHHHHHHHhC-CeEE
Confidence 8888999988 567899999999999999999999876421 2399999999987 999999999998776 4578
Q ss_pred EEEEccCCC---CcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHH
Q 008747 471 IVAFSREGP---TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIV 526 (555)
Q Consensus 471 ~~a~Sr~~~---~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~ 526 (555)
+.++|++.. .+++++..+. . +-..+..||+||| +.|+++|++.|.+..
T Consensus 174 ~~~~s~~~~~~~~~g~~~~~~~-~------~~~~~~~vyvCGp-~~m~~~v~~~l~~~g 224 (243)
T 4eh1_A 174 QVWYRDESADDVLQGEMQLAEL-I------LPIEDGDFYLCGP-IGFMQYVVKQLLALG 224 (243)
T ss_dssp EEEESSCCCTTCEESSCCCTTS-C------CCTTTCEEEEEEC-HHHHHHHHHHHHHHT
T ss_pred EEEEccCCCcccccCCccHHHe-e------ccCCCcEEEEECC-HHHHHHHHHHHHHcC
Confidence 899998654 3567766554 1 1135789999999 899999999988654
No 23
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.89 E-value=2.3e-23 Score=204.93 Aligned_cols=168 Identities=18% Similarity=0.258 Sum_probs=130.8
Q ss_pred cccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEecCCCCCCCCCCCCeEEE
Q 008747 331 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 410 (555)
Q Consensus 331 ~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~~~F~lp~~~~~piimI 410 (555)
..|+|||+|+|. ..+.++|+|+.+ ..|.+|+||+++.+|+ .+.+..+.|.|.++.+..++++||
T Consensus 59 ~~R~ysi~s~~~-~~~~~~l~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~gP~G~f~~~~~~~~~~vli 122 (243)
T 2eix_A 59 IYRPYTPVSSDD-EKGYFDLIIKVY---------EKGQMSQYIDHLNPGD------FLQVRGPKGQFDYKPNMVKEMGMI 122 (243)
T ss_dssp EEEEECCCSCTT-CCSEEEEEEECC---------TTCHHHHHHHTCCTTC------EEEEEEEECSCCCCTTSSSEEEEE
T ss_pred EEeeeeecCCCC-CCCEEEEEEEEc---------CCCCcchHhhcCCCCC------EEEEECCeEEEEeCCCCCcEEEEE
Confidence 469999999986 357888877643 2488999999876654 367888889999887667899999
Q ss_pred ccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCC----Ccccccc
Q 008747 411 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP----TKEYVQH 486 (555)
Q Consensus 411 a~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~----~k~yVq~ 486 (555)
|+|||||||++|++++.... ....+++|+||+|+.+ |++|.+||+++.+.....+++.++||+.. .++||++
T Consensus 123 agG~GiaP~~~~l~~l~~~~---~~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~~g~v~~ 198 (243)
T 2eix_A 123 AGGTGITPMLQVARAIIKNP---KEKTIINLIFANVNED-DILLRTELDDMAKKYSNFKVYYVLNNPPAGWTGGVGFVSA 198 (243)
T ss_dssp EEGGGHHHHHHHHHHHHTCT---TCCCEEEEEEEEEEGG-GCTTHHHHHHHHHHCTTEEEEEEEEECCTTCCSEESSCCH
T ss_pred ecCccHHHHHHHHHHHHhCC---CCCcEEEEEEEcCCHH-HhhHHHHHHHHHHHCCCeEEEEEeCCCCccccCcCCccCH
Confidence 99999999999999986421 1236899999999987 99999999999876555578899998532 3578875
Q ss_pred hhhccHHHHHHHH---hCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 487 KMMEKSSDIWNML---SEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 487 ~l~~~~~~v~~~l---~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
.+.+ +.+ ..+..+|+||| +.|+++|++.|.+.
T Consensus 199 ~~l~------~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~ 233 (243)
T 2eix_A 199 DMIK------QHFSPPSSDIKVMMCGP-PMMNKAMQGHLETL 233 (243)
T ss_dssp HHHH------HHSCCTTSSEEEEEESS-HHHHHHHHHHHHHH
T ss_pred HHHH------HhcCCCCCCeEEEEECC-HHHHHHHHHHHHHc
Confidence 4322 122 24578999999 89999999988764
No 24
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.88 E-value=5e-23 Score=217.27 Aligned_cols=181 Identities=14% Similarity=0.235 Sum_probs=138.6
Q ss_pred CCChHHHHHHhcCC-----CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhc-cCCCCcCCCCceee
Q 008747 316 KPPLGVFFAAIVPR-----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAP 389 (555)
Q Consensus 316 ~~p~~~ll~~~~p~-----~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~~v~ 389 (555)
...+||++.+.+|+ ..+|+|||+|+|. .+.++|+|+.+ ..|.+|+||++ +.+|+ .+.
T Consensus 182 ~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~---------~~G~~S~~L~~~l~~Gd------~v~ 244 (396)
T 1gvh_A 182 EYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKRE---------EGGQVSNWLHNHANVGD------VVK 244 (396)
T ss_dssp CCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECC---------TTCHHHHHHHHTCCTTC------EEE
T ss_pred CCCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEc---------CCCcchHHHHhcCCCCC------EEE
Confidence 34578888655452 3479999999986 46788777632 24999999997 65543 377
Q ss_pred EEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcce
Q 008747 390 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 469 (555)
Q Consensus 390 v~~~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~ 469 (555)
+..|.|.|.++.+..+|+||||+|||||||++|++++.... ..++++|+||+|+++ |++|++||+++.+.....+
T Consensus 245 v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 319 (396)
T 1gvh_A 245 LVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAG----HTAQVNWFHAAENGD-VHAFADEVKELGQSLPRFT 319 (396)
T ss_dssp EEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHT----CCSCEEEEEEESCTT-TCCSHHHHHHHHHTSSSEE
T ss_pred EEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcC----CCCcEEEEEEeCCHH-HhhhHHHHHHHHHHCCCeE
Confidence 88888999997666789999999999999999999987642 136899999999997 9999999999988766668
Q ss_pred EEEEEccCCC---------Ccccccch-hhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 470 LIVAFSREGP---------TKEYVQHK-MMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 470 l~~a~Sr~~~---------~k~yVq~~-l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
++.++|++.. ..++++.. +.+.. .+ .++.+|+||| ++|+++|++.|.+.
T Consensus 320 ~~~~~s~~~~~~~~~~~~~~~G~~~~~~l~~~~-----~~-~~~~vyvCGp-~~m~~~v~~~L~~~ 378 (396)
T 1gvh_A 320 AHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAF-----SD-PTMQFYLCGP-VGFMQFTAKQLVDL 378 (396)
T ss_dssp EEEEESSCCHHHHHHTCCSEESSCCGGGSSSCC-----CC-TTCEEEEESC-HHHHHHHHHHHHHT
T ss_pred EEEEECCCCccccccCccCccCcCCHHHHhhcc-----CC-CCCEEEEeCC-HHHHHHHHHHHHHc
Confidence 8889998643 23455543 22210 01 3789999999 89999999988753
No 25
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.88 E-value=1.7e-24 Score=216.72 Aligned_cols=202 Identities=17% Similarity=0.215 Sum_probs=146.2
Q ss_pred CChHHHHHHhcC---CCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEE-E
Q 008747 317 PPLGVFFAAIVP---RLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF-V 392 (555)
Q Consensus 317 ~p~~~ll~~~~p---~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~-~ 392 (555)
..+||++.+.+| ....|+|||+|+|. .+.++++|+.+ ..|.+|+||+++.+|+ .+.+. .
T Consensus 47 ~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~g 109 (271)
T 4fk8_A 47 FNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKV---------QNGPLTSRLQHLKVGD------PVLIGKK 109 (271)
T ss_dssp CCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEESC
T ss_pred cCCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEEE---------CCCchhhHHhcCCCCC------EEEEecC
Confidence 457888755445 23579999999986 35677666532 3488999998776654 36788 7
Q ss_pred ecCCCCCCC-CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCC-----
Q 008747 393 RQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA----- 466 (555)
Q Consensus 393 ~~~~F~lp~-~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~----- 466 (555)
+.|.|.++. +..++++|||+|||||||+++++++..... ..+++|+||+|+.+ |++|.+||+++.+...
T Consensus 110 P~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~----~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~ 184 (271)
T 4fk8_A 110 PTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER----FDKVVLTHTCRLKG-ELAYMDYIKHDLPGHEYLGDV 184 (271)
T ss_dssp CBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH----CSEEEEEECCCSHH-HHHHHHHHHTCCTTCTTHHHH
T ss_pred CCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCC----CCCEEEEEecCCHH-HHhHHHHHHHHHHhCcccccc
Confidence 889998875 357899999999999999999999865432 26899999999997 9999999998876643
Q ss_pred ---cceEEEEEccCCC-CcccccchhhccHHHHHHH-----H-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHH
Q 008747 467 ---LSQLIVAFSREGP-TKEYVQHKMMEKSSDIWNM-----L-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSK 536 (555)
Q Consensus 467 ---~~~l~~a~Sr~~~-~k~yVq~~l~~~~~~v~~~-----l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~ 536 (555)
..+++.++|++.. .+++|++.+.+. .+.+. + .+++.+|+||| +.|+++|++.|.+.......
T Consensus 185 ~~~~~~~~~~~s~~~~~~~G~v~~~~~~~--~l~~~~~~~~~~~~~~~v~vCGp-~~m~~~v~~~l~~~gv~~~~----- 256 (271)
T 4fk8_A 185 IREKLVYYPTVTREEFENEGRITDLIASG--KLFTDLDMPPFSPEQDRVMLCGS-TAMLKDTTELLKKAGLVEGK----- 256 (271)
T ss_dssp HHHHEEEEECC-------CCHHHHHHHHS--HHHHHTTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHTTCCBCB-----
T ss_pred ccceEEEEEEecCCccccccccChHHhcc--hhhhhcccccCCCCCCEEEEECC-HHHHHHHHHHHHHcCCchhh-----
Confidence 2468888888643 468888877553 11111 1 35789999999 89999999999875544332
Q ss_pred HHHHHHHHHHCCCEEEeeC
Q 008747 537 AESMVKNLQMTGRYLRDVW 555 (555)
Q Consensus 537 a~~~~~~l~~~~Ry~~dvw 555 (555)
+...|+|+.|.|
T Consensus 257 -------i~~~~~~~~E~y 268 (271)
T 4fk8_A 257 -------NSAPGHYVIERA 268 (271)
T ss_dssp -------TTBCBSEEEEES
T ss_pred -------cCCCCcEEEEEe
Confidence 234678887765
No 26
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.88 E-value=2.7e-23 Score=208.31 Aligned_cols=178 Identities=17% Similarity=0.226 Sum_probs=131.5
Q ss_pred cccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEecCCCCC--------CCC
Q 008747 331 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKL--------PAD 402 (555)
Q Consensus 331 ~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~~~F~l--------p~~ 402 (555)
.+|+|||+|+|. ..+.++|+|+.+...+..+....|.+|+||+++.+|+ .+.|..+.|.|.+ +.+
T Consensus 64 ~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd------~v~v~gP~G~~~~~~~~~f~l~~~ 136 (275)
T 1umk_A 64 VVRPYTPISSDD-DKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGD------TIEFRGPSGLLVYQGKGKFAIRPD 136 (275)
T ss_dssp EEEEECCSSCTT-CCSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEEEEETTEEEECSS
T ss_pred EEeccccCCccC-CCCeEEEEEEEeccCcccccCCCChhHHHHhcCCCCC------EEEEEcCccceEecCCcccccccc
Confidence 579999999986 3578998887653322222224599999998876654 3667777787643 321
Q ss_pred --------CCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCC-cceEEEE
Q 008747 403 --------AKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA-LSQLIVA 473 (555)
Q Consensus 403 --------~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~-~~~l~~a 473 (555)
..+|+||||+|||||||++|++++.... ....+++|+||+|+.+ |++|.+||+++.+... ..+++.+
T Consensus 137 ~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~---~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~ 212 (275)
T 1umk_A 137 KKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDP---DDHTVCHLLFANQTEK-DILLRPELEELRNKHSARFKLWYT 212 (275)
T ss_dssp TTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCT---TCCCEEEEEEEESSGG-GCTTHHHHHHHHHHCTTTEEEEEE
T ss_pred ccccccccCCceEEEEecCccHhHHHHHHHHHHhCC---CCCcEEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcEEEEEE
Confidence 3578999999999999999999986421 1236899999999986 9999999999987643 3478889
Q ss_pred EccCCC----CcccccchhhccHHHHHHHH---hCCCEEEEecCCcchHH-HHHHHHHHHH
Q 008747 474 FSREGP----TKEYVQHKMMEKSSDIWNML---SEGAYLYVCGDAKSMAR-DVHRTLHTIV 526 (555)
Q Consensus 474 ~Sr~~~----~k~yVq~~l~~~~~~v~~~l---~~~~~iyvCG~~~~M~~-~v~~~L~~i~ 526 (555)
+||+.. .++||++.+.+ +.+ .+++.||+||| +.|++ ++++.|.+.+
T Consensus 213 ~s~~~~~~~~~~g~v~~~~l~------~~l~~~~~~~~vyvCGp-~~m~~~~v~~~L~~~G 266 (275)
T 1umk_A 213 LDRAPEAWDYGQGFVNEEMIR------DHLPPPEEEPLVLMCGP-PPMIQYACLPNLDHVG 266 (275)
T ss_dssp ESSCCSSCSSEESSCCHHHHH------HHSCCGGGCCEEEEESC-HHHHHHTTHHHHHHHT
T ss_pred EcCCCccccCccCccCHHHHH------HhcCCCCCCeEEEEECC-HHHHHHHHHHHHHHcC
Confidence 998643 36788765432 122 25789999999 89999 8998887643
No 27
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.87 E-value=3.8e-23 Score=205.93 Aligned_cols=170 Identities=22% Similarity=0.250 Sum_probs=129.7
Q ss_pred ChHHHHHHhcCC---CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEec
Q 008747 318 PLGVFFAAIVPR---LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ 394 (555)
Q Consensus 318 p~~~ll~~~~p~---~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~ 394 (555)
.+||++.+.+|. ..+|+|||+|+|.. .+.++|+|+.+ ..|.+|+||+++.+|+ .+.+..|.
T Consensus 35 ~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~-~~~l~~~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~gP~ 98 (262)
T 1ep3_B 35 LPGQFLHLAVPNGAMLLRRPISISSWDKR-AKTCTILYRIG---------DETTGTYKLSKLESGA------KVDVMGPL 98 (262)
T ss_dssp STTCEEEECCSCTTCCSCEEEECCEEETT-TTEEEEEEECC---------CTTSHHHHHHTCCTTC------EEEEEEEE
T ss_pred CCCceEEEEcCCCCceeeEEEEeeeecCC-CCEEEEEEEEe---------cCCchHHHHhcCCCCC------EEEEEccc
Confidence 467877555553 67899999999863 57888877642 2488999999876654 36788887
Q ss_pred CC-CCCCCC-CCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEE
Q 008747 395 SN-FKLPAD-AKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIV 472 (555)
Q Consensus 395 ~~-F~lp~~-~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~ 472 (555)
|. |.++.+ ..+|++|||+|||||||++|++++.... .+++||||+|+++ |++|.+||+++... ++++
T Consensus 99 G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~------~~v~l~~~~r~~~-~~~~~~el~~l~~~----~~~~ 167 (262)
T 1ep3_B 99 GNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG------CQMTILLGFASEN-VKILENEFSNLKNV----TLKI 167 (262)
T ss_dssp SBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT------CEEEEEEEESSGG-GCCCHHHHHTSTTE----EEEE
T ss_pred CCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC------CeEEEEEEcCCHH-HhhhHHHHhhhccC----cEEE
Confidence 77 998764 4689999999999999999999987531 6799999999997 99999999886532 3444
Q ss_pred EEccCC--CCcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHH
Q 008747 473 AFSREG--PTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHT 524 (555)
Q Consensus 473 a~Sr~~--~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 524 (555)
+ ++++ ..++||++.+.+. +.++..||+||| +.|+++|++ |.+
T Consensus 168 ~-~~~~~~~~~g~v~~~l~~~-------~~~~~~vyvCGp-~~m~~~v~~-l~~ 211 (262)
T 1ep3_B 168 A-TDDGSYGTKGHVGMLMNEI-------DFEVDALYTCGA-PAMLKAVAK-KYD 211 (262)
T ss_dssp E-ETTCSSSEESCHHHHHHHC-------CSCCSEEEEESC-HHHHHHHHH-HTT
T ss_pred E-ECCCCCcceeehHHHHHhh-------ccCCCEEEEECC-HHHHHHHHH-HHh
Confidence 4 3433 2467888766542 235789999999 899999998 754
No 28
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.87 E-value=4.5e-22 Score=210.18 Aligned_cols=170 Identities=14% Similarity=0.284 Sum_probs=131.9
Q ss_pred CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhh-ccCCCCcCCCCceeeEEEecCCCCCCCC----CC
Q 008747 330 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQSNFKLPAD----AK 404 (555)
Q Consensus 330 ~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~-~~~~~~~~~~~~~v~v~~~~~~F~lp~~----~~ 404 (555)
..+|+|||+|+|. ++.++|+|+... ..+....|.+|+||+ ++.+|+ .+.+..|.|.|.++.+ ..
T Consensus 204 ~~~R~ySi~s~p~--~~~~~i~Vk~~~---~~~~~~~G~~S~~L~~~l~~Gd------~v~v~gP~G~f~l~~~~~~~~~ 272 (399)
T 4g1v_A 204 DALRHYSLCSAST--KNGLRFAVKMEA---ARENFPAGLVSEYLHKDAKVGD------EIKLSAPAGDFAINKELIHQNE 272 (399)
T ss_dssp CEEEEEEBSCSCC--TTCEEEEEECCC---CBTTBCCCHHHHHHHHTCCTTC------EEEEEEEECSCCCCTTTTTCSS
T ss_pred ceeeeecccCCCC--CCeEEEEEEecc---CCCCCCCCEehhHHHhCCCCCC------EEEEEecccceeeCcccccCCC
Confidence 4679999999986 467887765321 111124699999997 555543 4778888899999866 57
Q ss_pred CCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCCCcccc
Q 008747 405 VPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYV 484 (555)
Q Consensus 405 ~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~k~yV 484 (555)
+|+||||+|||||||++|++++..... .++++|+||+|+.+ |++|.++|+++.+.....+++.++|++. +++
T Consensus 273 ~~~vlIagG~GitP~~s~l~~l~~~~~----~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~---g~~ 344 (399)
T 4g1v_A 273 VPLVLLSSGVGVTPLLAMLEEQVKCNP----NRPIYWIQSSYDEK-TQAFKKHVDELLAECANVDKIIVHTDTE---PLI 344 (399)
T ss_dssp SCEEEEEEGGGHHHHHHHHHHHHHHCT----TSCEEEEEEESSST-TSTTHHHHHHHHTTCSSEEEEEEETTTS---CCC
T ss_pred CCEEEEecceeHhHHHHHHHHHHHcCC----CCCEEEEEecCCHH-HhhhHHHHHHHHHhCCCcEEEEEEeCCC---Ccc
Confidence 899999999999999999999876432 36899999999986 9999999999998776668899999853 455
Q ss_pred cchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 485 QHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 485 q~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
+.. .+.+.+..++.||+||| +.|+++|++.|.+.
T Consensus 345 ~~~------~l~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 345 NAA------FLKEKSPAHADVYTCGS-LAFMQAMIGHLKEL 378 (399)
T ss_dssp CHH------HHHHHSCSSCEEEEEEC-HHHHHHHHHHHHHT
T ss_pred cHH------HHHhhCCCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 432 22333445899999999 89999999998764
No 29
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.87 E-value=3.5e-23 Score=207.36 Aligned_cols=184 Identities=18% Similarity=0.239 Sum_probs=138.2
Q ss_pred CChHHHHHHhcCC----CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEE-
Q 008747 317 PPLGVFFAAIVPR----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF- 391 (555)
Q Consensus 317 ~p~~~ll~~~~p~----~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~- 391 (555)
..+||++.+.+|. ...|+|||+|+|. .+.++|+|+.+ ..|.+|+||+++.+|+ .+.+.
T Consensus 44 ~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~--~~~~~l~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~ 106 (272)
T 2bgi_A 44 FRSGEFVMIGLLDDNGKPIMRAYSIASPAW--DEELEFYSIKV---------PDGPLTSRLQHIKVGE------QIILRP 106 (272)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEEECCSCTT--CSEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEEE
T ss_pred cCCCCEEEEEeccCCCCeeeeeeeeccCCC--CCeEEEEEEEc---------cCCCchhHHHhCCCCC------EEEEee
Confidence 3568887555452 3579999999986 36788766533 2488999999776654 36677
Q ss_pred EecCCCCCCCCC-CCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHH-HHHH-----c
Q 008747 392 VRQSNFKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELN-NFVQ-----S 464 (555)
Q Consensus 392 ~~~~~F~lp~~~-~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~-~~~~-----~ 464 (555)
.+.|.|.++... .++++|||+|||||||++|++++.... ...+++|+||+|+.+ |++|.+||+ ++.+ .
T Consensus 107 gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~ 181 (272)
T 2bgi_A 107 KPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYE----KFDEVIMMHACRTVA-ELEYGRQLVEALQEDPLIGE 181 (272)
T ss_dssp EEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGT----SCSEEEEEEEESSSG-GGHHHHHHHHHHHHCTTTTT
T ss_pred CCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhcC----CCCcEEEEEEeCCHH-HhhHHHHHHHHHHhcchhhc
Confidence 678889887543 689999999999999999999865321 136799999999997 999999999 8876 2
Q ss_pred --CCcceEEEEEccCCC-CcccccchhhccHHHHHHHH------hCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 465 --GALSQLIVAFSREGP-TKEYVQHKMMEKSSDIWNML------SEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 465 --~~~~~l~~a~Sr~~~-~k~yVq~~l~~~~~~v~~~l------~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
....+++.++||+.. .++||++.+.+.. +.+.+ ..++.+|+||| +.|+++|++.|.+.
T Consensus 182 ~~~~~~~~~~~~s~~~~~~~g~v~~~l~~~~--l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 248 (272)
T 2bgi_A 182 LVEGKLKYYPTTTREEFHHMGRITDNLASGK--VFEDLGIAPMNPETDRAMVCGS-LAFNVDVMKVLESY 248 (272)
T ss_dssp TSTTTEEEEEEESSSCCSSBCCHHHHHHSCH--HHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHTT
T ss_pred ccCCcEEEEEEecCCccccCceechHHHhhh--HhhhcccccCCCCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 234478889998742 4789998876542 11111 25689999999 89999999988754
No 30
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.87 E-value=2.9e-23 Score=206.05 Aligned_cols=184 Identities=16% Similarity=0.197 Sum_probs=136.1
Q ss_pred CChHHHHHHhcC---CCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEE-E
Q 008747 317 PPLGVFFAAIVP---RLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF-V 392 (555)
Q Consensus 317 ~p~~~ll~~~~p---~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~-~ 392 (555)
..+||++.+.+| ....|+|||+|+|. .+.++|+|+.+ ..|.+|+||+++.+|+ .+.|. .
T Consensus 31 ~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~~~~~i~~~---------~~G~~s~~l~~l~~Gd------~v~v~~g 93 (257)
T 2qdx_A 31 FKTGQFVMIGLEVDGRPLMRAYSIASPNY--EEHLEFFSIKV---------PDGPLTSRLQHLKEGD------ELMVSRK 93 (257)
T ss_dssp CCTTCEEEEEEEETTEEEEEEEECCSCTT--SSEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEECSC
T ss_pred cCCCCEEEEEecCCCCceeeeeEeecCCC--CCeEEEEEEEe---------CCCcchhHHHhCCCCC------EEEEecC
Confidence 457888755444 23579999999986 36788766533 3488999999876654 35666 5
Q ss_pred ecCCCCCCCCC-CCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHH-HHHH-----c-
Q 008747 393 RQSNFKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELN-NFVQ-----S- 464 (555)
Q Consensus 393 ~~~~F~lp~~~-~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~-~~~~-----~- 464 (555)
+.|.|.++... .+++||||+|||||||+++++++..... ..+++|+||+|+.+ |++|.+||+ ++.+ +
T Consensus 94 p~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~----~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~~ 168 (257)
T 2qdx_A 94 PTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYER----YEKVILVHGVRWVS-ELAYADFITKVLPEHEYFGDQ 168 (257)
T ss_dssp CBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHH----CSEEEEEEEESSGG-GCTTHHHHHTTGGGCTTTHHH
T ss_pred CCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCC----CCeEEEEEEcCCHH-HhHhHHHHHHHHHhchhhhcc
Confidence 66888886543 6899999999999999999998765422 26899999999997 999999999 7754 1
Q ss_pred -CCcceEEEEEccCCC-CcccccchhhccHHHHHHHH------hCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 465 -GALSQLIVAFSREGP-TKEYVQHKMMEKSSDIWNML------SEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 465 -~~~~~l~~a~Sr~~~-~k~yVq~~l~~~~~~v~~~l------~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
....+++.++||+.. .+++|++.+.+.. +.+.+ ..++.||+||| +.|+++|++.|.+.
T Consensus 169 ~~~~~~~~~~~s~~~~~~~g~v~~~l~~~~--l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 234 (257)
T 2qdx_A 169 VKEKLIYYPLVTREPFRNQGRQTDLMRSGK--LFEDIGLPPMNPQDDRAMICGS-PSMLEETSAVLDSF 234 (257)
T ss_dssp HHHHEEEEEEESSSCCSSBSCHHHHHHHSH--HHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHT
T ss_pred CCCcEEEEEEecCCCcccCceechhhhhhh--HHHhcccccCCcCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 123368889998742 4688988876532 11111 25689999999 89999999988753
No 31
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.86 E-value=5.2e-22 Score=209.98 Aligned_cols=171 Identities=23% Similarity=0.329 Sum_probs=129.5
Q ss_pred CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhc-cCCCCcCCCCceeeEEEecCCCCCCCCCCCCeE
Q 008747 330 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAPIFVRQSNFKLPADAKVPII 408 (555)
Q Consensus 330 ~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~-~~~~~~~~~~~~v~v~~~~~~F~lp~~~~~pii 408 (555)
..+|+|||+|+|. .+.++|+|+.+ +.+..+.|.+|+||++ +.+|+ .+.|..|.|.|.++.+..+|+|
T Consensus 203 ~~~R~YSi~s~p~--~~~~~i~Vk~~----~~~~~~~G~~S~~L~~~l~~Gd------~v~v~gP~G~f~l~~~~~~~~v 270 (403)
T 1cqx_A 203 QQIRQYSLSDMPN--GRTYRISVKRE----GGGPQPPGYVSNLLHDHVNVGD------QVKLAAPYGSFHIDVDAKTPIV 270 (403)
T ss_dssp EEEEEEECCSCCC--SSCEEEEEECC----CBTTBCCCHHHHHHHHHCCTTC------EEEECCCBCSCSCCTTCCSCEE
T ss_pred ceeecceecCCCC--CCeEEEEEEEC----CCCCCCCCeehHHHhhCCCCCC------EEEEecCccCcccCCCCCCCEE
Confidence 3579999999986 47788877643 1122335999999995 65543 3667778889999766678999
Q ss_pred EEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEEccCCCC--------
Q 008747 409 MIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT-------- 480 (555)
Q Consensus 409 mIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~-------- 480 (555)
|||+|||||||++|++++.. . ..++++|+||+|+.+ |++|++||+++.+.....+++.++|++...
T Consensus 271 lIagGtGitP~~s~l~~l~~-~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~~~~~ 344 (403)
T 1cqx_A 271 LISGGVGLTPMVSMLKVALQ-A----PPRQVVFVHGARNSA-VHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYD 344 (403)
T ss_dssp EEESSCCHHHHHHHHHHHTC-S----SCCCEEEEEEESCSS-SCHHHHHHHHHHHHCTTEEEEEEESSCCTTCCBTTTBS
T ss_pred EEEecccHhhHHHHHHHHHh-C----CCCcEEEEEEeCChh-hCcHHHHHHHHHHhCCCcEEEEEECCCCcccccccccC
Confidence 99999999999999999764 1 236899999999997 999999999998776555788899986432
Q ss_pred -cccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHH
Q 008747 481 -KEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTI 525 (555)
Q Consensus 481 -k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i 525 (555)
.++++..+ +.+.+ ..++.+|+||| ++|+++|++.|.+.
T Consensus 345 ~~G~i~~~~------l~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~ 384 (403)
T 1cqx_A 345 YPGLVDVKQ------IEKSILLPDADYYICGP-IPFMRMQHDALKNL 384 (403)
T ss_dssp EESSCCGGG------SHHHHCCTTCEEEEESS-HHHHHHHHHHHHHT
T ss_pred cCCCcCHHH------HhhccCCCCCEEEEeCC-HHHHHHHHHHHHHc
Confidence 23444321 11211 23789999999 89999999988753
No 32
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.86 E-value=3.4e-22 Score=199.73 Aligned_cols=176 Identities=14% Similarity=0.240 Sum_probs=126.9
Q ss_pred cccccccCCCCCCCCCeEEEEEEEEEeeCCCCCe-eccccchhhhccCCCCcCCCCceeeEEEecCC--------CCCCC
Q 008747 331 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSN--------FKLPA 401 (555)
Q Consensus 331 ~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~-~~G~~S~~L~~~~~~~~~~~~~~v~v~~~~~~--------F~lp~ 401 (555)
.+|+|||+|+|.. .+.++|+|+++.. ...++. ..|.+|+||+++.+|+ .+.+..+.|. |.++.
T Consensus 60 ~~R~ySi~s~~~~-~~~~~l~vk~~~~-~~~~~~~~~G~~s~~l~~l~~Gd------~v~v~gP~G~~~~~~~g~f~l~~ 131 (270)
T 2cnd_A 60 CMRAYTPTSMVDE-IGHFDLLVKVYFK-NEHPKFPNGGLMTQYLDSLPVGS------YIDVKGPLGHVEYTGRGSFVING 131 (270)
T ss_dssp EEEEECCCSCTTC-CSEEEEEEECCCS-SCBTTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEECCSSSCEEETT
T ss_pred EEEeeccCCCccC-CCEEEEEEEEecc-CcccccCCCCchhhHHhcCCCCC------EEEEECCcccceeccccceeccC
Confidence 4699999999863 5789988875421 111111 2499999998776654 3667777665 66664
Q ss_pred --CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCC-cceEEEEEccC-
Q 008747 402 --DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA-LSQLIVAFSRE- 477 (555)
Q Consensus 402 --~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~-~~~l~~a~Sr~- 477 (555)
+..+|+||||+|||||||++|++++.... .....+++||||+|+++ |++|.+||+++.+... ..+++.++|++
T Consensus 132 ~~~~~~~~vliagGtGiaP~~~~l~~l~~~~--~~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~~s~~~ 208 (270)
T 2cnd_A 132 KQRNARRLAMICGGSGITPMYQIIQAVLRDQ--PEDHTEMHLVYANRTED-DILLRDELDRWAAEYPDRLKVWYVIDQVK 208 (270)
T ss_dssp EEECCSEEEEEEEGGGHHHHHHHHHHHHHTT--TTCCCEEEEEEEESCGG-GCTTHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred CcccCCEEEEEeccccHHHHHHHHHHHHhcC--CCCCcEEEEEEEcCCHH-HcchHHHHHHHHHHCcCcEEEEEEECCCC
Confidence 24689999999999999999999987531 11236899999999997 9999999999987643 34688888873
Q ss_pred --CC----CcccccchhhccHHHHHHHH---hCCCEEEEecCCcchHHH-HHHHHHH
Q 008747 478 --GP----TKEYVQHKMMEKSSDIWNML---SEGAYLYVCGDAKSMARD-VHRTLHT 524 (555)
Q Consensus 478 --~~----~k~yVq~~l~~~~~~v~~~l---~~~~~iyvCG~~~~M~~~-v~~~L~~ 524 (555)
+. .++||++.+.+ +.+ ..+..+|+||| +.|+++ +++.|.+
T Consensus 209 ~~~~~~~~~~g~v~~~~l~------~~l~~~~~~~~vyvCGp-~~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 209 RPEEGWKYSVGFVTEAVLR------EHVPEGGDDTLALACGP-PPMIQFAISPNLEK 258 (270)
T ss_dssp CGGGCCCSEESSCCHHHHH------HHSCCCSSSEEEEEECC-HHHHHTTTHHHHHT
T ss_pred CCCCCcccccccCCHHHHH------HhcCCCcCCEEEEEECC-HHHHHHHHHHHHHH
Confidence 11 36788875432 122 23568999999 899986 5777654
No 33
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.84 E-value=9.4e-22 Score=201.70 Aligned_cols=173 Identities=16% Similarity=0.208 Sum_probs=129.8
Q ss_pred CChHHHHHHhcCCCcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccc-cchhhh-ccCCCCcCCCCceeeEEEec
Q 008747 317 PPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGL-CSTWMK-NSLPMEKSNDCSWAPIFVRQ 394 (555)
Q Consensus 317 ~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~-~S~~L~-~~~~~~~~~~~~~v~v~~~~ 394 (555)
..+||++.+.+|....|+|||+|+|.. .+.++|+|+.+ ..|. +|+||+ ++.+|+ .+.|..|.
T Consensus 39 ~~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk~~---------~~G~g~S~~L~~~l~~Gd------~v~v~gP~ 102 (321)
T 2pia_A 39 FEAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVKRD---------SNGRGGSISFIDDTSEGD------AVEVSLPR 102 (321)
T ss_dssp CCTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEECC---------TTSCSHHHHHHHSCCTTC------EEEECCCB
T ss_pred CCCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEEEe---------cCCcchhHHHHhcCCCCC------EEEEeCCc
Confidence 357888866556668899999999863 46788777533 2376 899999 665543 36677778
Q ss_pred CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEEE
Q 008747 395 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 474 (555)
Q Consensus 395 ~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~ 474 (555)
|.|.++.+ .+++||||+|||||||++|++++.... ..+++|+||+|+++ |++|.+||+++. .+. ++.+.+
T Consensus 103 g~f~l~~~-~~~~vliagG~GItP~~s~l~~l~~~~-----~~~v~l~~~~r~~~-~~~~~~el~~l~-~~~--~~~~~~ 172 (321)
T 2pia_A 103 NEFPLDKR-AKSFILVAGGIGITPMLSMARQLRAEG-----LRSFRLYYLTRDPE-GTAFFDELTSDE-WRS--DVKIHH 172 (321)
T ss_dssp CCSCCCTT-CSEEEEEEEGGGHHHHHHHHHHHHHHC-----SSEEEEEEEESCGG-GCTTHHHHHSTT-TTT--TEEEEE
T ss_pred cccccCCC-CCCEEEEEecccHhHHHHHHHHHHHcC-----CCcEEEEEEECChh-hhHHHHHHhcCc-cCC--eEEEEE
Confidence 89998764 678999999999999999999987542 15799999999997 999999999885 222 345556
Q ss_pred ccCCC-CcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHH
Q 008747 475 SREGP-TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHT 524 (555)
Q Consensus 475 Sr~~~-~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 524 (555)
+++.. .+.++++.+.+ ...+..+|+||| +.|+++|++.|.+
T Consensus 173 ~~~~~~g~~~~~~ll~~--------~~~~~~vyvCGP-~~m~~~v~~~l~~ 214 (321)
T 2pia_A 173 DHGDPTKAFDFWSVFEK--------SKPAQHVYCCGP-QALMDTVRDMTGH 214 (321)
T ss_dssp CTTCTTSCCCHHHHHSS--------CCTTEEEEEESC-HHHHHHHHHHTTT
T ss_pred CCCcccCccCHHHHhcc--------cCCCCEEEEECC-HHHHHHHHHHHHh
Confidence 65431 23444444332 135789999999 8999999999876
No 34
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=99.75 E-value=2.5e-18 Score=162.55 Aligned_cols=97 Identities=28% Similarity=0.733 Sum_probs=88.4
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCc-hHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y-~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
.+||++||| +|++|+|+..|+++|+... ...|++++|||||+||++| ++||.+++.++++|+++||+++.+++++|
T Consensus 70 ~vi~g~~Ty-~G~~p~~~~~fl~~L~~~~--~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~~~~~~d 146 (191)
T 1bvy_F 70 AVLIVTASY-NGHPPDNAKQFVDWLDQAS--ADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEAD 146 (191)
T ss_dssp EEEEEECCB-TTBCCTTTHHHHHHHHTCC--SSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEEE
T ss_pred eEEEEEeec-CCCcCHHHHHHHHHHHhcc--chhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEeeccEEEe
Confidence 589999999 9999999999999998642 2358999999999999999 69999999999999999999999999998
Q ss_pred CCCCchhhHHHHHHHHHHHHH
Q 008747 81 DDQCIEDDFSAWRELVWPELD 101 (555)
Q Consensus 81 ~~~~~~~~~~~W~~~l~~~l~ 101 (555)
++.+.+++++.|.+.||++|.
T Consensus 147 ~~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 147 ASDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHHhc
Confidence 866677779999999999996
No 35
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.65 E-value=2.6e-17 Score=162.72 Aligned_cols=166 Identities=13% Similarity=0.098 Sum_probs=111.5
Q ss_pred ChHHHHHHhcCC----CcccccccCCCCCCCCCeEEEEEEEEEeeCCCCCeeccccchhhhccCCCCcCCCCceeeEEEe
Q 008747 318 PLGVFFAAIVPR----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR 393 (555)
Q Consensus 318 p~~~ll~~~~p~----~~pR~YSIaSsp~~~~~~i~i~v~~v~~~~~~g~~~~G~~S~~L~~~~~~~~~~~~~~v~v~~~ 393 (555)
.+||++.+.+|. ...|+|||+|.+. ++++|.|.++ + ..|.+|+||+++.+|+ .+.|..|
T Consensus 40 ~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~----~----~~G~~S~~l~~l~~Gd------~l~v~gP 102 (252)
T 2gpj_A 40 QESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLH----D----TDGPASSWAKTAQVGE------LIQIGGP 102 (252)
T ss_dssp CTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECC----S----SCCHHHHHHHHCCTTC------EEEEEEE
T ss_pred CCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEe----C----CCCcHHHHHhhCCCCC------EEEEecC
Confidence 468888665563 3569999999764 5666555432 1 1278899999876654 3678888
Q ss_pred cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcceEEEE
Q 008747 394 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVA 473 (555)
Q Consensus 394 ~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a 473 (555)
.|.|.++.+ .++++|||+||||||+++|+++... ..++++++++|+.+ |.+.. + .....+++.+
T Consensus 103 ~G~f~l~~~-~~~~lliagGtGitPi~s~l~~l~~-------~~~~~~~~~~~~~~-d~~~l---~----~~~~~~v~~~ 166 (252)
T 2gpj_A 103 GLKKLINFE-ADWFLLAGDMTALPAISVNLAKLPN-------NAVGYAVIEVLSEA-DIQPL---V----HPEHVELHWV 166 (252)
T ss_dssp ECCCCCCSS-SSEEEEEEEGGGHHHHHHHHHHSCT-------TCEEEEEEEESSGG-GCCCC---C----CCTEEEEEEE
T ss_pred CCCCcCCCC-CceEEEEcchhhHHHHHHHHHhCCC-------CCcEEEEEEECCHH-Hhhcc---c----CCCCcEEEEE
Confidence 899998754 4789999999999999999998632 14678999999875 55432 1 1122245555
Q ss_pred EccCCCC-cccccchhhccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHH
Q 008747 474 FSREGPT-KEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLH 523 (555)
Q Consensus 474 ~Sr~~~~-k~yVq~~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~ 523 (555)
++.+... ...+.+.+.+. .+ ..+..+|+||| ++|++++++.|.
T Consensus 167 ~~~~~~~~g~~~~~~l~~~------~~~~~~~~vy~CGP-~~m~~av~~~l~ 211 (252)
T 2gpj_A 167 INPEADPEGRPLVERIAQL------PWLAGEPAVWIACE-FNSMRALRRHFK 211 (252)
T ss_dssp ECSSCCTTCHHHHHHHTTS------CCCSSCEEEEEEEE-HHHHHHHHHHHH
T ss_pred eCCCCCcccHHHHHHHHhc------cCCCCCcEEEEEcC-HHHHHHHHHHHH
Confidence 5543221 11222222221 01 13568999999 899999999887
No 36
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=99.64 E-value=3.4e-16 Score=144.93 Aligned_cols=100 Identities=29% Similarity=0.437 Sum_probs=89.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
+.|||++||||.|++|++++.|+++|.... ...+++++|+|||+||++|.+||.+++.++++|+++|++++.+.+.+|
T Consensus 58 d~ii~g~pt~g~G~~p~~~~~f~~~l~~~~--~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~~~~~~d 135 (167)
T 1ykg_A 58 KLLIVVTSTQGEGEPPEEAVALHKFLFSKK--APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDAD 135 (167)
T ss_dssp SEEEEEEECBGGGBCCGGGHHHHHHHTSTT--CCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEC
T ss_pred CeEEEEEcccCCCcCChhHHHHHHHHHhcc--ccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEeecceecC
Confidence 368999999999999999999999997531 234889999999999999999999999999999999999999988877
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhh
Q 008747 81 DDQCIEDDFSAWRELVWPELDNLL 104 (555)
Q Consensus 81 ~~~~~~~~~~~W~~~l~~~l~~~~ 104 (555)
.+.++.++.|.++++++|...+
T Consensus 136 --~~~~~~~~~w~~~l~~~l~~~~ 157 (167)
T 1ykg_A 136 --VEYQAAASEWRARVVDALKSRA 157 (167)
T ss_dssp --TTCHHHHHHHHHHHHHHHHTCC
T ss_pred --CCcHHHHHHHHHHHHHHHHhhc
Confidence 4568889999999999997654
No 37
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=99.62 E-value=5.4e-17 Score=146.93 Aligned_cols=96 Identities=28% Similarity=0.365 Sum_probs=86.8
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.+||++||||.|++|++++.|+++|.... ..+++++|+|||+||++|++||.+++.++++|+++||+++.+.+.+|.
T Consensus 49 ~vi~g~pt~g~g~~p~~~~~f~~~l~~~~---~~l~~~~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~d~ 125 (147)
T 2hna_A 49 IWLVISSTHGAGDIPDNLSPFYEALQEQK---PDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINI 125 (147)
T ss_dssp EEEEECCTTTTCCTTSSCHHHHHHHHHHC---CCTTEEEEEEESCCHHHHSCSSSCTTHHHHHHHHHTCEECSSCBCCCC
T ss_pred eEEEEECccCCCCCChhHHHHHHHHHhhc---cccCCCEEEEEecccCCHHHHHHHHHHHHHHHHHcCCeEeeeeEEEec
Confidence 58999999999999999999999998642 148899999999999999999999999999999999999999998887
Q ss_pred CC--CchhhHHHHHHHHHHHH
Q 008747 82 DQ--CIEDDFSAWRELVWPEL 100 (555)
Q Consensus 82 ~~--~~~~~~~~W~~~l~~~l 100 (555)
.. +.++.+++|.+.++++|
T Consensus 126 ~~~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 126 LDHDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp SSCCSSCSCCHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHh
Confidence 43 66788999999999876
No 38
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.62 E-value=1.6e-16 Score=148.89 Aligned_cols=132 Identities=12% Similarity=0.247 Sum_probs=88.1
Q ss_pred ecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhh---cCCCCCeEEEEeccCCCCCCC-cHHHHHHHHHc----
Q 008747 393 RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA---GAELGPSLLFFGCRNRKMDYI-YEDELNNFVQS---- 464 (555)
Q Consensus 393 ~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~---~~~~~~~~L~~G~R~~~~d~l-y~del~~~~~~---- 464 (555)
|.|.|.++....+|+||||+|||||||+++++++...... +....+++|+||+|+.+ +++ |.++|+++.+.
T Consensus 6 P~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~-~~~w~~~~l~~l~~~~~~~ 84 (186)
T 3a1f_A 6 PFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTH-AFEWFADLLQLLESQMQER 84 (186)
T ss_dssp TTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTT-TTHHHHHHHHHHHHHHHHT
T ss_pred CCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcc-hHHHHHHHHHHHHHHHhhc
Confidence 4566665434467899999999999999999998765321 12247899999999997 887 99999999865
Q ss_pred --CCcceEEEEEccCCC---Ccccccc-----hh----------hccHHHHHH-HH---h-CCCEEEEecCCcchHHHHH
Q 008747 465 --GALSQLIVAFSREGP---TKEYVQH-----KM----------MEKSSDIWN-ML---S-EGAYLYVCGDAKSMARDVH 519 (555)
Q Consensus 465 --~~~~~l~~a~Sr~~~---~k~yVq~-----~l----------~~~~~~v~~-~l---~-~~~~iyvCG~~~~M~~~v~ 519 (555)
....++++.+|++.. .+.|++. .+ +-+.+.+.+ +. . .+..||+||| +.|+++|+
T Consensus 85 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP-~~m~~~v~ 163 (186)
T 3a1f_A 85 NNAGFLSYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGP-EALAETLS 163 (186)
T ss_dssp TCTTSEEEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESC-HHHHHHHH
T ss_pred cCCCeEEEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCC-HHHHHHHH
Confidence 223468888888532 1122221 00 111122222 22 1 3578999999 89999999
Q ss_pred HHHHHHH
Q 008747 520 RTLHTIV 526 (555)
Q Consensus 520 ~~L~~i~ 526 (555)
++|.+..
T Consensus 164 ~~l~~~g 170 (186)
T 3a1f_A 164 KQSISNS 170 (186)
T ss_dssp HHHHHTC
T ss_pred HHHHHhh
Confidence 9987754
No 39
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.59 E-value=1e-15 Score=137.84 Aligned_cols=118 Identities=12% Similarity=0.071 Sum_probs=83.2
Q ss_pred eEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcc
Q 008747 389 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 468 (555)
Q Consensus 389 ~v~~~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~ 468 (555)
.|..|.|+|....+ .++++|||+||||||++|++++....+ .+++|+ |+|+++ |.+|.+||+++..+ .
T Consensus 4 ~v~GP~G~~~~~~~-~~~~llIaGG~GiaPl~sm~~~l~~~~------~~v~l~-g~R~~~-~~~~~~el~~l~~~--~- 71 (142)
T 3lyu_A 4 NVAGPLGTPVPMEK-FGKILAIGAYTGIVEVYPIAKAWQEIG------NDVTTL-HVTFEP-MVILKEELEKAVTR--H- 71 (142)
T ss_dssp ---CCCSCCBCCCC-CSEEEEEEETTHHHHHHHHHHHHHHTT------CEEEEE-EEEEGG-GCCSHHHHHTTSSE--E-
T ss_pred eeeCCCCCCccCCC-CCeEEEEECcCcHHHHHHHHHHHHhcC------CcEEEE-EeCCHH-HhhHHHHHHHHHhh--e-
Confidence 35566677765433 689999999999999999999876431 469999 999997 99999999887542 1
Q ss_pred eEEEEEccCCC--------CcccccchhhccHHHHHHHH--hCCCEEEEecCCcchHHHHHHHHHHHH
Q 008747 469 QLIVAFSREGP--------TKEYVQHKMMEKSSDIWNML--SEGAYLYVCGDAKSMARDVHRTLHTIV 526 (555)
Q Consensus 469 ~l~~a~Sr~~~--------~k~yVq~~l~~~~~~v~~~l--~~~~~iyvCG~~~~M~~~v~~~L~~i~ 526 (555)
.+..+++++.. .+++|++.+.+ .+ .+...||+||| +.|+++|.+.+.+..
T Consensus 72 ~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~-------~~~~~~~~~vy~CGP-~~Mm~av~~~l~~~~ 131 (142)
T 3lyu_A 72 IVEPVPLNPNQDFLANMKNVSQRLKEKVRE-------LLESEDWDLVFMVGP-VGDQKQVFEVVKEYG 131 (142)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHHHHH-------HHHSSCCSEEEEESC-HHHHHHHHHHHHHHT
T ss_pred EEEEeecccccCCCCCCCCCccchhHHHHH-------hcccCCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 23333443211 24566654433 22 23568999999 999999999887754
No 40
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.59 E-value=6e-16 Score=141.92 Aligned_cols=120 Identities=11% Similarity=0.039 Sum_probs=82.7
Q ss_pred eEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEeccCCCCCCCcHHHHHHHHHcCCcc
Q 008747 389 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 468 (555)
Q Consensus 389 ~v~~~~~~F~lp~~~~~piimIa~GTGiAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~ 468 (555)
.+..|.|+|.... ..+|++|||+||||||++|++++..... .+++|+ |+|+++ |.+|.+||+++..+ +
T Consensus 9 ~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~~~------~~v~l~-g~r~~~-d~~~~~el~~l~~~--~- 76 (158)
T 3lrx_A 9 NVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQEIG------NDVTTL-HVTFEP-MVILKEELEKAVTR--H- 76 (158)
T ss_dssp ---CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHHHT------CEEEEE-EECBGG-GCCSHHHHHHHSSE--E-
T ss_pred EEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHhcC------CcEEEE-EeCCHH-HhhHHHHHHHHHhc--e-
Confidence 5677777765433 4689999999999999999999976431 479999 999997 99999999987642 1
Q ss_pred eEEEEEccCC--------CCcccccchhhccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHH
Q 008747 469 QLIVAFSREG--------PTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIV 526 (555)
Q Consensus 469 ~l~~a~Sr~~--------~~k~yVq~~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~ 526 (555)
.+..+++++. ..+++|++.+.+. +.+ .+...||+||| +.|+++|.+.|.+..
T Consensus 77 ~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~---l~~--~~~~~vy~CGP-~~mm~~v~~~l~~~G 136 (158)
T 3lrx_A 77 IVEPVPLNPNQDFLANMKNVSQRLKEKVREL---LES--EDWDLVFMVGP-VGDQKQVFEVVKEYG 136 (158)
T ss_dssp EECCBCCCTTSCHHHHHHHHHHHHHHHHHHH---HHH--SCCSEEEEESC-HHHHHHHHHHHGGGT
T ss_pred EEEEeeccccccCCCCCCCCcccccHHHHHh---hcc--CCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 2222233321 1246666644331 111 24568999999 999999999887643
No 41
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.44 E-value=7.1e-14 Score=126.28 Aligned_cols=94 Identities=19% Similarity=0.214 Sum_probs=81.2
Q ss_pred CeEEEEeccCCC--CccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccc
Q 008747 1 MKIYVIGCRYGD--GEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL 78 (555)
Q Consensus 1 ~~~i~~~sT~g~--G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~ 78 (555)
+.+||++||||. |++|++++.|+++|... .+++++|+|||+||++|..||.+++.++++|+++|++++.+...
T Consensus 51 d~ii~g~pty~~~~G~~p~~~~~fl~~l~~~-----~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~ 125 (148)
T 3f6r_A 51 DAVLFGCSAWGMEDLEMQDDFLSLFEEFDRI-----GLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLK 125 (148)
T ss_dssp SEEEEEECEECSSSCEECHHHHHHHTTGGGT-----CCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEE
T ss_pred CEEEEEecccCCCCCCCcHHHHHHHHHhhcc-----CCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceE
Confidence 368999999999 99999999999999753 48899999999999999999999999999999999999988776
Q ss_pred ccCCC-CchhhHHHHHHHHHHH
Q 008747 79 GDDDQ-CIEDDFSAWRELVWPE 99 (555)
Q Consensus 79 ~d~~~-~~~~~~~~W~~~l~~~ 99 (555)
.+... +..+.+..|.++|.++
T Consensus 126 ~~~~p~~~~~~~~~~~~~l~~~ 147 (148)
T 3f6r_A 126 MEGDASNDPEAVASFAEDVLKQ 147 (148)
T ss_dssp EESSGGGCHHHHHHHHHHHHHT
T ss_pred eecCcchHHHHHHHHHHHHHhh
Confidence 66521 1667788898887654
No 42
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=99.31 E-value=1.8e-12 Score=116.85 Aligned_cols=94 Identities=23% Similarity=0.283 Sum_probs=80.7
Q ss_pred CeEEEEeccCCCCc--cCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccc
Q 008747 1 MKIYVIGCRYGDGE--PTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL 78 (555)
Q Consensus 1 ~~~i~~~sT~g~G~--~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~ 78 (555)
+.+||++||||.|. +|++++.|+++|... .+++++++|||+||++|..||.+.+.+++.|.++|++.+.+...
T Consensus 50 d~ii~~~p~y~~g~~~~p~~~~~fl~~l~~~-----~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~ 124 (147)
T 1f4p_A 50 DLVLLGCSTWGDDSIELQDDFIPLFDSLEET-----GAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLR 124 (147)
T ss_dssp SEEEEEECEECSSSCEECTTTHHHHHTGGGS-----CCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEE
T ss_pred CEEEEEeCCCCCCCcCCChhHHHHHHHHHhc-----ccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhhcccc
Confidence 36899999999999 999999999999753 38899999999999999889999999999999999999987766
Q ss_pred ccCCCC-chhhHHHHHHHHHHH
Q 008747 79 GDDDQC-IEDDFSAWRELVWPE 99 (555)
Q Consensus 79 ~d~~~~-~~~~~~~W~~~l~~~ 99 (555)
.|...+ ..+.+..|.++++++
T Consensus 125 ~~~~p~~~~~~~~~~~~~l~~~ 146 (147)
T 1f4p_A 125 IDGDPRAARDDIVGWAHDVRGA 146 (147)
T ss_dssp EESCGGGGHHHHHHHHHHHHTT
T ss_pred cccCchhHHHHHHHHHHHHHhh
Confidence 665322 566789999887654
No 43
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=99.29 E-value=2.8e-12 Score=120.09 Aligned_cols=99 Identities=21% Similarity=0.381 Sum_probs=82.5
Q ss_pred CeEEEEeccCCCCccC--------ccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCC-ch-HHHHHHHHHHHHHHHcCC
Q 008747 1 MKIYVIGCRYGDGEPT--------DNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGA 70 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p--------~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~l~~lGa 70 (555)
+.|||++||||.|++| ++++.|+++|... .|++++|+|||+||+. |. +||.+++.++++|.++||
T Consensus 49 d~ii~g~pty~~G~~pg~~~~~~~~~~~~f~~~l~~~-----~l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~ 123 (182)
T 2wc1_A 49 DFLILGTPTLGDGQLPGLSANAASESWEEFLPRIADQ-----DFSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGA 123 (182)
T ss_dssp SEEEEEEECBTTTBCSSGGGTCSSCCHHHHGGGGTTC-----CCTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTC
T ss_pred CeEEEEEeeCCCCCCCccccccchhHHHHHHHHhhhc-----cCCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCC
Confidence 4689999999999999 9999999988643 4889999999999998 95 899999999999999999
Q ss_pred cccccc-------------------ccc-cCCC---CchhhHHHHHHHHHHHHHhhh
Q 008747 71 KRLVPV-------------------GLG-DDDQ---CIEDDFSAWRELVWPELDNLL 104 (555)
Q Consensus 71 ~~i~~~-------------------~~~-d~~~---~~~~~~~~W~~~l~~~l~~~~ 104 (555)
+.+.+. +++ |.++ ..++.++.|.+.|+++|...+
T Consensus 124 ~~v~~~~~~g~~~~~~~~~~~~~~~gl~~d~~~~~~~~~~~~~~w~~~l~~~l~~~~ 180 (182)
T 2wc1_A 124 NVVGRWPAKGYGFEDSLAVVEGEFLGLALDQDNQAALTPERLKGWLSLIAADFGLVL 180 (182)
T ss_dssp EEECCEECTTSCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHTHHHHTCCC
T ss_pred EEEEeecCCCcCcccchhhhcCceeeeeccCCCCccccHHHHHHHHHHHHHHHhccc
Confidence 987653 443 3322 257789999999999887543
No 44
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=99.28 E-value=4.6e-12 Score=118.32 Aligned_cols=96 Identities=21% Similarity=0.307 Sum_probs=80.1
Q ss_pred CeEEEEeccCCCCccC--------ccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCC-ch-HHHHHHHHHHHHHHHcCC
Q 008747 1 MKIYVIGCRYGDGEPT--------DNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGA 70 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p--------~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~l~~lGa 70 (555)
+.|||++||||+|++| ++++.|+++|... .+++++|+|||+||+. |. +||.+++.++++|.++|+
T Consensus 48 d~iilg~pt~~~G~~pg~~~~~~~~~~~~fl~~l~~~-----~l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~ 122 (179)
T 1yob_A 48 QFLILGTPTLGEGELPGLSSDAENESWEEFLPKIEGL-----DFSGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGA 122 (179)
T ss_dssp SEEEEEEECBTTTBCSSGGGTCSSCCHHHHHHHHTTC-----CCTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTC
T ss_pred CEEEEEeccCCCCcCCcccccccchHHHHHHHHhhhc-----ccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCC
Confidence 3689999999999999 9999999999643 4889999999999998 95 899999999999999999
Q ss_pred cccccc-------------------cc-ccCC---CCchhhHHHHHHHHHHHHH
Q 008747 71 KRLVPV-------------------GL-GDDD---QCIEDDFSAWRELVWPELD 101 (555)
Q Consensus 71 ~~i~~~-------------------~~-~d~~---~~~~~~~~~W~~~l~~~l~ 101 (555)
+.+.+. +. .|.+ ...++.++.|.+++++.|.
T Consensus 123 ~~~~~~~~~g~~~~~s~~~~~~~f~gl~~d~~~~~~~~~~~i~~w~~~l~~~~~ 176 (179)
T 1yob_A 123 KIVGSWSTDGYEFESSEAVVDGKFVGLALDLDNQSGKTDERVAAWLAQIAPEFG 176 (179)
T ss_dssp EEECCBCCTTCCCSCCTTBSSSSBSSEEECTTTCGGGHHHHHHHHHHHHGGGGT
T ss_pred EEEEeeccCCCCcccchhhhcCceeccccCCCCCCcccHHHHHHHHHHHHHHHh
Confidence 987553 32 3432 2357789999999887664
No 45
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=99.24 E-value=1.6e-11 Score=113.87 Aligned_cols=95 Identities=24% Similarity=0.381 Sum_probs=77.8
Q ss_pred CeEEEEeccCCCCcc----CccHHHHH-HHHHhhcCCCCCCCCceEEEEeecCCC-c-hHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEP----TDNAARFY-KWFTEQKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~----p~n~~~f~-~~l~~~~~~~~~l~~~~~avfGlGds~-y-~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.|||++||||+|++ |++++.|+ +.|... .+++++|+|||+||+. | ++||.+++.++++|.++|++.+
T Consensus 47 d~ii~g~pt~~~G~~~~~~p~~~~~fl~~~l~~~-----~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~ 121 (173)
T 2fcr_A 47 DLLFLGAPTWNTGADTERSGTSWDEFLYDKLPEV-----DMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPV 121 (173)
T ss_dssp SEEEEEEECCSTTCSSCCSCSTHHHHHHHTGGGC-----CCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEEeecCCCCcCccCcHHHHHHHHhhcccc-----ccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEE
Confidence 368999999999999 89999999 877643 4889999999999998 8 5899999999999999999887
Q ss_pred ccc-------------------cc-ccC---CCCchhhHHHHHHHHHHHH
Q 008747 74 VPV-------------------GL-GDD---DQCIEDDFSAWRELVWPEL 100 (555)
Q Consensus 74 ~~~-------------------~~-~d~---~~~~~~~~~~W~~~l~~~l 100 (555)
.+. +. .|. +...++.++.|.+++.+.|
T Consensus 122 ~~~~~~g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~i~~w~~~i~~~~ 171 (173)
T 2fcr_A 122 GFSNPDDYDYEESKSVRDGKFLGLPLDMVNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp CCBCGGGSCCSCCTTEETTEESSEEEETTTCSSCHHHHHHHHHHHHHHHH
T ss_pred eecccCCcccccchhhhCCeeeeeeecCCCCccccHHHHHHHHHHHHHHh
Confidence 652 11 122 2245778999999988766
No 46
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=99.20 E-value=1.2e-11 Score=114.93 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=79.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCC-c-hHHHHHHHHHHHHHHHcCCcccccc--
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRLVPV-- 76 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~-y-~~f~~~~~~~~~~l~~lGa~~i~~~-- 76 (555)
+.|||+++|||.|++|++++.|+++|... .|++++++|||+||+. | ++||.+.+.+++.|.+.|++.+...
T Consensus 47 d~ii~g~pt~~~G~~p~~~~~f~~~l~~~-----~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~ 121 (175)
T 1ag9_A 47 DILLLGIPTWYYGEAQCDWDDFFPTLEEI-----DFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPT 121 (175)
T ss_dssp SEEEEECCEETTTEECHHHHHHHHHHTTC-----CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCEEC
T ss_pred CEEEEEEeecCCCcChHHHHHHHhhhhhc-----ccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 36899999999999999999999999743 4889999999999986 8 6899999999999999999887531
Q ss_pred ------------------cc-ccCCC---CchhhHHHHHHHHHHHHHh
Q 008747 77 ------------------GL-GDDDQ---CIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 77 ------------------~~-~d~~~---~~~~~~~~W~~~l~~~l~~ 102 (555)
+. .|.+. ..++.+..|.++|++.|..
T Consensus 122 ~g~~~~~s~~~~~~~~~~gl~~~~~~~~~~~~~~i~~w~~~i~~~~~~ 169 (175)
T 1ag9_A 122 AGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHL 169 (175)
T ss_dssp TTCCCSCCSCEEETTEESSEEECTTTCHHHHHHHHHHHHHHHHHHHTH
T ss_pred CCcccccchheeeCCeEEeeecCCCCcccccHHHHHHHHHHHHHHhhh
Confidence 11 22212 2456789999999998764
No 47
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=99.12 E-value=1.2e-11 Score=113.57 Aligned_cols=93 Identities=22% Similarity=0.325 Sum_probs=73.9
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCC-ch-HHHHHHHHHHHHHHHcCCcccccc--
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV-- 76 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~l~~lGa~~i~~~-- 76 (555)
+.|||++||||.|++|++++.|+++|... .|++++|+|||+||+. |. +||.+++.++++|.+ |+.+.+.
T Consensus 46 d~ii~g~pt~~~g~~p~~~~~f~~~l~~~-----~l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~~~~~~ 118 (164)
T 2bmv_A 46 TKVILVAPTAGAGDLQTDWEDFLGTLEAS-----DFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTST 118 (164)
T ss_dssp SEEEEEEEEETTTEECHHHHHHHTTCCTH-----HHHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEECCCEES
T ss_pred CEEEEEECCcCCCcCcHHHHHHHHHHhhh-----hcCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEEccccC
Confidence 35899999999999999999999988643 3778999999999996 97 799999999999998 7666552
Q ss_pred -----------------cc-ccCCC---CchhhHHHHHHHHHHHH
Q 008747 77 -----------------GL-GDDDQ---CIEDDFSAWRELVWPEL 100 (555)
Q Consensus 77 -----------------~~-~d~~~---~~~~~~~~W~~~l~~~l 100 (555)
+. .|... ..++.++.|.+++++.|
T Consensus 119 ~g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~l~~~l 163 (164)
T 2bmv_A 119 DGYHFEASKAVEGGKFVGLVIDEDNQDDLTDERISKWVEQVKGSF 163 (164)
T ss_dssp TTCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHTTTC
T ss_pred CCccccchhhhhcCcccCccCCCCCccccCHHHHHHHHHHHHHhh
Confidence 22 22221 24677899999887644
No 48
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.10 E-value=1e-10 Score=107.80 Aligned_cols=96 Identities=18% Similarity=0.299 Sum_probs=78.6
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCC-Cch-HHHHHHHHHHHHHHHcCCcccccc--
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNR-QYE-HFNKIAKVVDEILANQGAKRLVPV-- 76 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds-~y~-~f~~~~~~~~~~l~~lGa~~i~~~-- 76 (555)
+.|||++||||.|.+|++++.|+++|... .+++++++|||+|++ .|. +||.+.+.+++.|.++|++.+.+.
T Consensus 48 d~ii~g~p~y~~g~~p~~~~~fl~~l~~~-----~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~ 122 (169)
T 1obo_A 48 QYLIIGCPTLNIGELQSDWEGLYSELDDV-----DFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWST 122 (169)
T ss_dssp SEEEEEEEEETTTEECHHHHHHHTTGGGC-----CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEEC
T ss_pred CEEEEEEeeCCCCcCCHHHHHHHHHhhhc-----CcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeecC
Confidence 36899999999999999999999998753 488999999999998 597 799999999999999999887541
Q ss_pred -----------------cc-ccC---CCCchhhHHHHHHHHHHHHH
Q 008747 77 -----------------GL-GDD---DQCIEDDFSAWRELVWPELD 101 (555)
Q Consensus 77 -----------------~~-~d~---~~~~~~~~~~W~~~l~~~l~ 101 (555)
+. .+. +...++.+..|.+.++++|.
T Consensus 123 ~g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~~l~ 168 (169)
T 1obo_A 123 DGYDFNDSKALRNGKFVGLALDEDNQSDLTDDRIKSWVAQLKSEFG 168 (169)
T ss_dssp TTCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHHHHHT
T ss_pred CCcccccchhhcCCceeeEEeeCCCccccCHHHHHHHHHHHHHHhc
Confidence 11 122 22356679999999988773
No 49
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=99.09 E-value=4.3e-11 Score=103.98 Aligned_cols=82 Identities=15% Similarity=0.114 Sum_probs=61.6
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchH-HHHHHHHHHHHHHHcCCcccccccccc
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEH-FNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~-f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
.+||++||||+|++|++++.|++. +++++|+|||+||+.|.. ||.+++.++++|.. ...+.. .+.
T Consensus 35 ~ii~g~pt~~~g~~p~~~~~fl~~----------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~~~---~~~~~~-~~~ 100 (119)
T 2xod_A 35 DFILITYTTGFGNVPERVLEFLER----------NNEKLKGVSASGNRNWGDMFGASADKISAKYEV---PIVSKF-ELS 100 (119)
T ss_dssp CEEEEECCBTTTBCCHHHHHHHHH----------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHHTC---CEEEEE-ETT
T ss_pred CEEEEEeecCCCcCCHHHHHHHHH----------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHhCC---ccEEEE-ecC
Confidence 589999999999999999999865 346899999999999975 99999999999743 222222 112
Q ss_pred CCCCchhhHHHHHHHHH
Q 008747 81 DDQCIEDDFSAWRELVW 97 (555)
Q Consensus 81 ~~~~~~~~~~~W~~~l~ 97 (555)
.+....+.+..|.++++
T Consensus 101 ~~~~d~~~~~~~~~~i~ 117 (119)
T 2xod_A 101 GTNNDVEYFKERVREIA 117 (119)
T ss_dssp CCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhc
Confidence 22223345788988765
No 50
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.08 E-value=1e-10 Score=107.82 Aligned_cols=95 Identities=19% Similarity=0.314 Sum_probs=78.3
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCC-ch-HHHHHHHHHHHHHHHcCCcccccc--
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV-- 76 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~l~~lGa~~i~~~-- 76 (555)
+.|||++|||+.|++|++++.|+++|... .++++++++||+|++. |. +||.+.+.+++.|.++|++.+...
T Consensus 48 d~ii~g~pty~~g~~p~~~~~f~~~l~~~-----~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~ 122 (169)
T 1czn_A 48 DYLIIGCPTWNVGELQSDWEGIYDDLDSV-----NFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPI 122 (169)
T ss_dssp SEEEEECCEETTTEECHHHHHHGGGGGGS-----CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEEC
T ss_pred CEEEEEecccCCCcCCHHHHHHHHHhhhh-----ccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 36899999999999999999999998643 4889999999999995 96 799999999999999999877521
Q ss_pred -----------------cc-ccCC---CCchhhHHHHHHHHHHHH
Q 008747 77 -----------------GL-GDDD---QCIEDDFSAWRELVWPEL 100 (555)
Q Consensus 77 -----------------~~-~d~~---~~~~~~~~~W~~~l~~~l 100 (555)
++ .|.+ ...++.+..|.+.+++.|
T Consensus 123 ~g~~~~~s~~~~~~~~~gl~~~~~~~~~~~~~~~~~w~~~~~~~~ 167 (169)
T 1czn_A 123 EGYDFNESKAVRNNQFVGLAIDEDNQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp TTCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHHHHT
T ss_pred CCcceecchheeCCeeeeeeecCCCccccCHHHHHHHHHHHHHHh
Confidence 11 2322 245678999999998876
No 51
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=98.96 E-value=5.9e-10 Score=99.37 Aligned_cols=84 Identities=17% Similarity=0.142 Sum_probs=61.0
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCc-hHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y-~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
.+|+++||||.|++|+++.+|++.. ++..|||+|+||++| +.||.+++.+++++ |...+. .-+.+
T Consensus 46 ~~ilv~pTyG~G~~P~~v~~Fl~~~----------~~~~~~V~g~Gd~~yg~~f~~a~~~i~~~~---~~~~~~-~~el~ 111 (139)
T 1rlj_A 46 PFVLVTYTTNFGQVPASTQSFLEKY----------AHLLLGVAASGNKVWGDNFAKSADTISRQY---QVPILH-KFELS 111 (139)
T ss_dssp CEEEEECCBGGGBCCHHHHHHHHHH----------GGGEEEEEEEECGGGGGGTTHHHHHHHHHH---TCCEEE-EEETT
T ss_pred CEEEEEcCcCCCcCcHHHHHHHHhC----------CCCEEEEEecCCCcHHHHHHHHHHHHHHHc---CCCCcc-eEEEc
Confidence 4789999999999999999888421 246899999999999 68999999998776 432221 11111
Q ss_pred CCCCchhhHHHHHHHHHHH
Q 008747 81 DDQCIEDDFSAWRELVWPE 99 (555)
Q Consensus 81 ~~~~~~~~~~~W~~~l~~~ 99 (555)
......+.+..|++.+|.+
T Consensus 112 g~~~D~~~~~~~~~~~~~~ 130 (139)
T 1rlj_A 112 GTSKDVELFTQEVERVVTK 130 (139)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 1122345688999888763
No 52
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=98.74 E-value=2.5e-08 Score=88.37 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=67.6
Q ss_pred CeEEEEeccCCCCccCc-cHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTD-NAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLG 79 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~-n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~ 79 (555)
+.+||++|||+.|.+|+ +++.|+++|... ++++++++||.|+..| |.+.+.++++|+++|++.+.+....
T Consensus 47 d~iiig~pty~~g~~p~~~~~~fl~~l~~~------l~~k~~~~f~t~g~~~---~~a~~~l~~~l~~~G~~~v~~~~~~ 117 (138)
T 5nul_A 47 DILILGCSAMTDEVLEESEFEPFIEEISTK------ISGKKVALFGSYGWGD---GKWMRDFEERMNGYGCVVVETPLIV 117 (138)
T ss_dssp SEEEEEECCBTTTBCCTTTHHHHHHHHGGG------CTTCEEEEEEEESSSC---SHHHHHHHHHHHHTTCEECSCCEEE
T ss_pred CEEEEEcCccCCCCCChHHHHHHHHHHHhh------cCCCEEEEEEecCCCC---ChHHHHHHHHHHHCCCEEECCceEE
Confidence 36899999999999997 999999999753 7899999999988764 7889999999999999998765544
Q ss_pred cCC--CCchhhHHHHHHHH
Q 008747 80 DDD--QCIEDDFSAWRELV 96 (555)
Q Consensus 80 d~~--~~~~~~~~~W~~~l 96 (555)
+.. ... +....|.+.+
T Consensus 118 ~~~p~~~d-~~~~~~~~~l 135 (138)
T 5nul_A 118 QNEPDEAE-QDCIEFGKKI 135 (138)
T ss_dssp ESSCGGGH-HHHHHHHHHH
T ss_pred ecCCCHHH-HHHHHHHHHH
Confidence 432 222 4455555443
No 53
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=98.49 E-value=8.2e-08 Score=85.76 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=60.7
Q ss_pred eEEEEeccCC----CCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCc-hHHHHHHHHHHHHHHHcCCcccccc
Q 008747 2 KIYVIGCRYG----DGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPV 76 (555)
Q Consensus 2 ~~i~~~sT~g----~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y-~~f~~~~~~~~~~l~~lGa~~i~~~ 76 (555)
-+|++++||| .|+.|+...+|++.+.+. ++-++|+|.||++| ++||.+++.+.+++.. .-+
T Consensus 61 p~vlv~PTYg~g~~~G~vP~~v~dFl~~~~n~--------~~~~gVigsGN~nfg~~Fc~A~d~ia~k~~v---P~l--- 126 (153)
T 3n3a_C 61 PYILIVPSYGGGGTAGAVPRQVIRFLNDEHNR--------ALLRGVIASGNRNFGEAYGRAGDVIARKCGV---PWL--- 126 (153)
T ss_dssp CEEEEEECCTTSSSSSSSCHHHHHHHTSHHHH--------HHEEEEEEEECGGGGGGTTHHHHHHHHHHTC---CEE---
T ss_pred CEEEEEeccCCCCcCCcCcHHHHHHHhhhccc--------CcEEEEEecCCCchhHHHHHHHHHHHHHhCC---CeE---
Confidence 4799999999 599999999999766532 45699999999998 8999999999998862 111
Q ss_pred ccccCCCCchh---hHHHHHHHHHH
Q 008747 77 GLGDDDQCIED---DFSAWRELVWP 98 (555)
Q Consensus 77 ~~~d~~~~~~~---~~~~W~~~l~~ 98 (555)
.+.+- .+.++ .+.+|++++|+
T Consensus 127 ~kfEL-~Gt~eDv~~v~~~~~~~~~ 150 (153)
T 3n3a_C 127 YRFEL-MGTQSDIENVRKGVTEFWQ 150 (153)
T ss_dssp EEEET-TCCHHHHHHHHHHHHHHHH
T ss_pred EEEeC-CCCHHHHHHHHHHHHHHHh
Confidence 22222 23333 46667777765
No 54
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=98.25 E-value=1.9e-06 Score=75.78 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=66.0
Q ss_pred CeEEEEeccCCCCccCc-cHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTD-NAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLG 79 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~-n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~ 79 (555)
+.+||+++||+.|.+|+ +++.|++++.. .++++++++||.+... ||.+.+.+++.|..+|++.+ +....
T Consensus 48 d~vi~g~p~y~~~~~~~~~~~~fl~~l~~------~l~~k~~~~~~t~g~~---~~~~~~~l~~~l~~~g~~~~-~~~~~ 117 (137)
T 2fz5_A 48 DVILLGCPAMGSEELEDSVVEPFFTDLAP------KLKGKKVGLFGSYGWG---SGEWMDAWKQRTEDTGATVI-GTAIV 117 (137)
T ss_dssp SEEEEECCCBTTTBCCHHHHHHHHHHHGG------GCSSCEEEEEEEESSC---CSHHHHHHHHHHHHTTCEEE-EEEEE
T ss_pred CEEEEEccccCCCCCCHHHHHHHHHHhhh------hcCCCEEEEEEecCCC---CchHHHHHHHHHHHCCCEEc-CcEEE
Confidence 36899999999999998 49999999964 3789999999975433 78899999999999999887 43333
Q ss_pred cCCCCchhhHHHHHHHHH
Q 008747 80 DDDQCIEDDFSAWRELVW 97 (555)
Q Consensus 80 d~~~~~~~~~~~W~~~l~ 97 (555)
....+..+.+..|.+++.
T Consensus 118 ~g~~~~~~~~~~~~~~l~ 135 (137)
T 2fz5_A 118 NEMPDNAPECKELGEAAA 135 (137)
T ss_dssp ESSSSSCTHHHHHHHHHH
T ss_pred eeCCChHHHHHHHHHHHh
Confidence 321111456777776653
No 55
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=98.12 E-value=2e-06 Score=78.29 Aligned_cols=90 Identities=8% Similarity=-0.096 Sum_probs=68.6
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.|||.+|||+ |++| ++.|++.|.... ++++.+++||.++ .+|.+.+.+.++|+++|++.+.+......
T Consensus 59 ~ii~Gspty~-g~~p--~~~~l~~l~~~~-----~~~k~va~fgs~g----~~~~a~~~l~~~l~~~G~~~v~~~~~~~~ 126 (159)
T 3fni_A 59 GLVIGMSPAA-SAAS--IQGALSTILGSV-----NEKQAVGIFETGG----GDDEPIDPLLSKFRNLGLTTAFPAIRIKQ 126 (159)
T ss_dssp EEEEECCBTT-SHHH--HHHHHHHHHHHC-----CTTSEEEEECCSS----SCBCCHHHHHHHHHHTTCEESSSCBCCSS
T ss_pred EEEEEcCcCC-CCcc--HHHHHHHHHhhc-----ccCCEEEEEEcCC----CCcHHHHHHHHHHHHCCCEEecCceEEEe
Confidence 5899999997 8887 488999887653 6899999999764 35678899999999999998876555444
Q ss_pred CC--CchhhHHHHHHHHHHHHHhh
Q 008747 82 DQ--CIEDDFSAWRELVWPELDNL 103 (555)
Q Consensus 82 ~~--~~~~~~~~W~~~l~~~l~~~ 103 (555)
.- ...+....|.+.+.+.+...
T Consensus 127 ~P~~~dl~~~~~~g~~la~~~~~~ 150 (159)
T 3fni_A 127 TPTENTYKLCEEAGTDLGQWVTRD 150 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 22 23345667887777776654
No 56
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=98.11 E-value=3.4e-06 Score=76.82 Aligned_cols=90 Identities=12% Similarity=-0.068 Sum_probs=67.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
+.|||++|||| |.+|. +.|++.|... .++++++++||.++. +|.+.+.++++|+++|++.+.+.....
T Consensus 53 d~ii~Gspty~-g~~p~--~~fl~~l~~~-----~l~gk~v~~fgs~g~----~g~a~~~l~~~l~~~G~~~v~~~~~~~ 120 (161)
T 3hly_A 53 RGIVLGTPPSQ-PSEAV--ATALSTIFAA-----AHNKQAIGLFDSYGG----DDEPIDALLAQFRNLGLHTAFPPIRVK 120 (161)
T ss_dssp SEEEEECCBSS-CCHHH--HHHHHHHHHH-----CCTTSEEEEECCCCS----SBCCHHHHHHHHHHTTCEESSSCBCCC
T ss_pred CEEEEEcCCcC-CchhH--HHHHHHHHhh-----hhCCCEEEEEEcCCC----CcHHHHHHHHHHHHCCCEEecCceEEe
Confidence 35899999997 88885 8899988765 278999999997654 478899999999999999886654433
Q ss_pred CC--CCchhhHHHHHHHHHHHHHh
Q 008747 81 DD--QCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 81 ~~--~~~~~~~~~W~~~l~~~l~~ 102 (555)
.. ....+....|.+.+...|..
T Consensus 121 ~~P~~~dl~~~~~~g~~la~~l~~ 144 (161)
T 3hly_A 121 DQPTEAIYQQCEESGTDLGQWLTR 144 (161)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHHHh
Confidence 32 22334566777777666653
No 57
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=97.48 E-value=0.00011 Score=76.55 Aligned_cols=89 Identities=8% Similarity=-0.107 Sum_probs=64.2
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccc-ccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPV-GLG 79 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~-~~~ 79 (555)
+.+||+++||+.|.+|. ++.|+++|... .++++.+++||. |..||.+.+.+++.|..+|++.+.+. ...
T Consensus 304 d~ii~g~p~y~~~~~~~-~~~~l~~l~~~-----~~~~k~~~~~~s----~g~~~~a~~~l~~~l~~~g~~~~~~~~~~~ 373 (398)
T 1ycg_A 304 RAVLVGSPTINNDILPV-VSPLLDDLVGL-----RPKNKVGLAFGA----YGWGGGAQKILEERLKAAKIELIAEPGPTV 373 (398)
T ss_dssp SEEEEECCCBTTBCCGG-GHHHHHHHHHH-----CCSSCEEEEEEE----ESSSCCHHHHHHHHHHHTTCEESCSSCCEE
T ss_pred CEEEEECCccCccchHH-HHHHHHHHhcc-----ccCCCEEEEEEe----CCCchHHHHHHHHHHHHCCeEEecCceEEE
Confidence 35899999998777774 99999999764 378999999997 44579999999999999999888654 333
Q ss_pred cCCC--CchhhHHHHHHHHHHH
Q 008747 80 DDDQ--CIEDDFSAWRELVWPE 99 (555)
Q Consensus 80 d~~~--~~~~~~~~W~~~l~~~ 99 (555)
+... ...+.+..|.+++...
T Consensus 374 ~~~p~~~~~~~~~~~~~~l~~~ 395 (398)
T 1ycg_A 374 QWVPRGEDLQRCYELGRKIAAR 395 (398)
T ss_dssp ESSCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHHHH
Confidence 2211 2223344555554443
No 58
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=97.44 E-value=0.00019 Score=74.72 Aligned_cols=91 Identities=14% Similarity=0.039 Sum_probs=68.4
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.+||+++|||.|.+| .++.|+++|... .++++.+++||.+ ..||.+.+.+.+.|.++|++.+.+....+.
T Consensus 306 ~ii~gsp~~~~~~~~-~~~~~l~~l~~~-----~l~~k~~~~f~t~----g~~~~a~~~l~~~l~~~G~~~~~~~~~~~~ 375 (402)
T 1e5d_A 306 AVIVGSPTHNNGILP-YVAGTLQYIKGL-----RPQNKIGGAFGSF----GWSGESTKVLAEWLTGMGFDMPATPVKVKN 375 (402)
T ss_dssp EEEEECCCBTTBCCH-HHHHHHHHHHHT-----CCCSCEEEEEEEE----SSSCHHHHHHHHHHHHTTCBCCSCCEEEES
T ss_pred EEEEECCccCCCchH-HHHHHHHHhhhc-----ccCCCEEEEEEcC----CCccHHHHHHHHHHHHCCCEEecCceEEee
Confidence 589999999877766 699999998764 3789999999974 456889999999999999998864333332
Q ss_pred C--CCchhhHHHHHHHHHHHHHh
Q 008747 82 D--QCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 82 ~--~~~~~~~~~W~~~l~~~l~~ 102 (555)
. ....+.+..|.+.+...+.+
T Consensus 376 ~p~~~~~~~~~~~~~~l~~~l~~ 398 (402)
T 1e5d_A 376 VPTHADYEQLKTMAQTIARALKA 398 (402)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhh
Confidence 2 12334566787777766654
No 59
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=96.83 E-value=0.00085 Score=69.81 Aligned_cols=92 Identities=15% Similarity=-0.009 Sum_probs=65.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
+.|||+++||+ |..|..++.|++++...... . |+++.+++||.|+.. +.+.+.+.+.|..+|++.+.+ ....
T Consensus 309 d~iiigsP~y~-~~~~~~~k~~ld~l~~~~~~-~-l~~k~~~~~~~~g~~----~~a~~~l~~~l~~~g~~~~~~-~~~~ 380 (404)
T 2ohh_A 309 GAIALGAPTIY-DEPYPSVGDLLMYLRGLKFN-R-TLTRKALVFGSMGGN----GGATGTMKELLAEAGFDVACE-EEVY 380 (404)
T ss_dssp SEEEEECCEET-TEECTHHHHHHHHHHHHCGG-G-TCCEEEEEEEEESSS----CCHHHHHHHHHHHTTEEEEEE-EEEE
T ss_pred CEEEEECcccc-ccchHHHHHHHHHhhhcccc-c-cCCCEEEEEEecCCC----ChhHHHHHHHHHHCCCEEEeE-EEEe
Confidence 36899999996 55666799999999865322 2 689999999998865 557789999999999988765 2222
Q ss_pred C--CCCchhhHHHHHHHHHHHH
Q 008747 81 D--DQCIEDDFSAWRELVWPEL 100 (555)
Q Consensus 81 ~--~~~~~~~~~~W~~~l~~~l 100 (555)
. +....+....|.+.+...+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~ 402 (404)
T 2ohh_A 381 YVPTGDELDACFEAGRKLAAEI 402 (404)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHH
Confidence 2 1122334556666655443
No 60
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=96.66 E-value=0.0056 Score=56.85 Aligned_cols=72 Identities=11% Similarity=-0.148 Sum_probs=58.5
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.|||+++||. |.+|..++.|++++.... ....+.++++++|+.+...+..++.+.+.+...|..+|++.+-
T Consensus 73 D~ii~gsP~y~-~~~~~~lk~~ld~~~~~~-~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~ 144 (200)
T 2a5l_A 73 AGLALGSPTRF-GNMASPLKYFLDGTSSLW-LTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLG 144 (200)
T ss_dssp SEEEEEEECBT-TBCCHHHHHHHHTCHHHH-HHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEEcChhc-cCccHHHHHHHHHHHHHh-hccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEEC
Confidence 35899999995 889999999999986531 1124889999999999887765678889999999999987654
No 61
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=96.55 E-value=0.0052 Score=64.09 Aligned_cols=92 Identities=8% Similarity=-0.149 Sum_probs=64.7
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCC-CCceEEEEeecCCCchHHHHHHHHHHHHHHH-cCCcccccc-c
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWL-QKLKYGVFGLGNRQYEHFNKIAKVVDEILAN-QGAKRLVPV-G 77 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l-~~~~~avfGlGds~y~~f~~~~~~~~~~l~~-lGa~~i~~~-~ 77 (555)
+.|||+++||+. ..|..++.|++++.... + +++.+++||.|+.. +.+.+.+.+.|.. +|++.+.+. .
T Consensus 309 D~iiigsP~y~~-~~~~~~k~fld~l~~~~-----~~~~K~~~~~~t~g~~----~~a~~~l~~~l~~~~g~~~~~~~~~ 378 (414)
T 2q9u_A 309 GAVAFASPTLNN-TMMPSVAAALNYVRGLT-----LIKGKPAFAFGAFGWS----NRAVPDIVAELRDGCKADVYDEKGI 378 (414)
T ss_dssp SEEEEECCCBTT-BCCHHHHHHHHHHHHHT-----TTTTSBEEEEEEESSS----CCHHHHHHHHHHHTSCCBCCCSSCE
T ss_pred CEEEEEcCccCc-CchHHHHHHHHHHHhhc-----ccCCCEEEEEEecCCC----chhHHHHHHHHHhhcCcEEccCccE
Confidence 368999999964 55556999999998642 5 78999999998764 4567899999999 999887643 2
Q ss_pred cccC--CCCchhhHHHHHHHHHHHHHh
Q 008747 78 LGDD--DQCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 78 ~~d~--~~~~~~~~~~W~~~l~~~l~~ 102 (555)
.... +....+....|.+.+...+.+
T Consensus 379 ~~~~~p~~~~~~~~~~~g~~l~~~~~~ 405 (414)
T 2q9u_A 379 TFKFNYTEELLEQAYNAGVDLGKRAIA 405 (414)
T ss_dssp EEESCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2222 112234456776666665543
No 62
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=96.12 E-value=0.0086 Score=55.64 Aligned_cols=71 Identities=13% Similarity=0.004 Sum_probs=58.3
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.|||.++||. |.+|..++.|++++...- ....+.++.+++|+.+.+.+..+..+...+...|..+|...+
T Consensus 56 D~ii~gsP~y~-g~~~~~~k~fld~~~~~~-~~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~v 126 (193)
T 3d7n_A 56 DAIIFGTPTYM-GGPSWQFKKFADASSKPW-FSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWV 126 (193)
T ss_dssp SEEEEEEEEET-TEECHHHHHHHHHTHHHH-HTTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeCccC-CCccHHHHHHHHHhhhhc-cccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEe
Confidence 35899999995 999999999999986421 112488999999999988877677888999999999998654
No 63
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=95.98 E-value=0.023 Score=52.33 Aligned_cols=69 Identities=13% Similarity=-0.049 Sum_probs=52.9
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEee-cCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGl-Gds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.|||.++|| .|.+|..++.|++++.... ...++++++++||. |+.. ..+....+.+.+.|..+|...+
T Consensus 54 D~ii~gsP~y-~g~~~~~lk~fld~~~~~~--~~~l~gk~~~~~~t~g~~~-g~~~~~l~~l~~~l~~~g~~~~ 123 (188)
T 2ark_A 54 DGLAVGSPTN-MGLVSWKMKRFFDDVLGDL--WGEIDGKIACAFSSSGGWG-GGNEVACMSILTMLMNFGFLVF 123 (188)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHTGGGT--TTSCTTCEEEEEEEESSBT-SSHHHHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeCcc-CCcCCHHHHHHHHHHhhhh--HHHhCCCeEEEEEECCCCC-CCHHHHHHHHHHHHHHCCcEEe
Confidence 4689999999 8999999999999987521 12488999999999 5533 2245666778888888888544
No 64
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=95.98 E-value=0.015 Score=52.51 Aligned_cols=80 Identities=13% Similarity=0.006 Sum_probs=54.5
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEee-cCCCchHHHHHHHHHHHHHHHcCCccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRLVPVGLG 79 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGl-Gds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~ 79 (555)
+.|||.++|| .|.+|..++.|.+.+ .++++++++|+. |++.+. .+.+.+.+.|. ||+- .+-...
T Consensus 80 d~iilG~P~~-~g~~~~~~~~fl~~~--------~l~gk~v~~f~t~g~~~~g---~~~~~l~~~l~--~~~~-~~g~~~ 144 (162)
T 3klb_A 80 EVLFVGFPVW-WYIAPTIINTFLESY--------DFAGKIVVPFATSGGSGIG---NCEKNLHKAYP--DIVW-KDGKLL 144 (162)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTS--------CCTTCEEEEEEECSSCCSH---HHHHHHHHHCT--TSEE-CCCEEC
T ss_pred CEEEEEcccc-cCCCCHHHHHHHHhc--------CCCCCEEEEEEEeCCCCcc---HHHHHHHHHcC--CCEe-ecceEE
Confidence 3689999999 488998877776543 378999999998 556663 34566666665 5543 332222
Q ss_pred cCCCCchhhHHHHHHHH
Q 008747 80 DDDQCIEDDFSAWRELV 96 (555)
Q Consensus 80 d~~~~~~~~~~~W~~~l 96 (555)
.. ...++++..|++++
T Consensus 145 ~g-~~~~~~v~~W~~~~ 160 (162)
T 3klb_A 145 NG-QITRDLVTEWFEKI 160 (162)
T ss_dssp CS-CCCHHHHHHHHHHT
T ss_pred eC-CCCHHHHHHHHHHh
Confidence 22 34578899999865
No 65
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=95.82 E-value=0.025 Score=51.51 Aligned_cols=79 Identities=11% Similarity=0.059 Sum_probs=55.0
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecC-CCchHHHHHHHHHHHHHHHcCCccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGN-RQYEHFNKIAKVVDEILANQGAKRLVPVGLG 79 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGd-s~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~ 79 (555)
+.|||.++||+ |.+|..++.|.+.+ .++++++++|+.+. +.+ ..+.+.+.+.|. |++ +.+-...
T Consensus 89 D~iilg~Pvy~-g~~~~~~~~fl~~~--------~l~gk~v~~f~t~g~~~~---g~a~~~l~~~l~--~~~-~~~g~~~ 153 (171)
T 4ici_A 89 DVVFIGYPIWW-DLAPRIINTFIEGH--------SLKGKTVVPFATSGGSSI---GNSATVLKKTYP--DLN-WKEGRLL 153 (171)
T ss_dssp SEEEEEEECBT-TBCCHHHHHHHHHS--------CCTTSEEEEEEECSSCCS---HHHHHHHHHHST--TSE-ECCCEEC
T ss_pred CEEEEeccccc-CCchHHHHHHHHHc--------CCCcCEEEEEEecCCCCc---chHHHHHHHHcC--CCe-eccCeEe
Confidence 36899999996 88888888877665 27899999999965 443 455666777765 444 3343333
Q ss_pred cCCCCchhhHHHHHHHH
Q 008747 80 DDDQCIEDDFSAWRELV 96 (555)
Q Consensus 80 d~~~~~~~~~~~W~~~l 96 (555)
+. ..++++..|++.+
T Consensus 154 ~~--~~~~~i~~Wl~~~ 168 (171)
T 4ici_A 154 NR--TDEKAIRAWLDVI 168 (171)
T ss_dssp SS--CCHHHHHHHHHHH
T ss_pred cC--CCHHHHHHHHHHh
Confidence 22 3567899999865
No 66
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=95.73 E-value=0.0095 Score=55.51 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=52.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.+||++++| .|..|...+.|.+|+.. ..+.++.+++|+.|... ..++.....+...|..+|++.+-
T Consensus 71 D~ii~~sP~y-~~~~p~~lK~~ld~l~~-----~~~~gK~~~~~~tgg~~-~~~~a~~~~l~~~l~~~g~~~v~ 137 (197)
T 2vzf_A 71 DGLIVATPIY-KASYTGLLKAFLDILPQ-----FALAGKAALPLATGGSP-AHVLALDYGLRPVLHSMGVRHVV 137 (197)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHTTSCT-----TTTTTCEEEEEEEESSG-GGGGHHHHTHHHHHHTTTCSEEC
T ss_pred CEEEEEeCcc-CCCCCHHHHHHHHhccc-----cccCCCEEEEEEECCCc-chhhHHHHHHHHHHHHcCCEecc
Confidence 3589999999 58899999999999853 24889999999998764 33443334689999999998764
No 67
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=95.61 E-value=0.018 Score=53.27 Aligned_cols=71 Identities=13% Similarity=-0.071 Sum_probs=55.5
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.|||.++|| .|.+|..++.|++++..... ...+.++++++|+.+... .....+.+.+...|..+|+..+-
T Consensus 70 D~ii~gsP~y-~~~~~~~lk~~ld~~~~~~~-~~~l~~K~~~~~~t~g~~-g~~~~~l~~l~~~l~~~g~~~v~ 140 (198)
T 3b6i_A 70 DAIIFGTPTR-FGNMSGQMRTFLDQTGGLWA-SGALYGKLASVFSSTGTG-GGQEQTITSTWTTLAHHGMVIVP 140 (198)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHTTCHHHHH-HTTTTTCEEEEEEEESSS-TTHHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEEeChh-cCCchHHHHHHHHHhhhhhh-hcccCCCEEEEEEeCCCC-ccHHHHHHHHHHHHHHCCcEEEC
Confidence 3589999999 79999999999999864311 124889999999998765 44556778888899999986553
No 68
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=95.54 E-value=0.022 Score=52.81 Aligned_cols=72 Identities=7% Similarity=-0.131 Sum_probs=55.8
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.|||.+++|. |.+|..++.|++++.... ....+.++++++|+.+...+.....+.+.+...|..+|+..+-
T Consensus 72 D~ii~gsP~y~-~~~~~~lk~~ld~~~~~~-~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~ 143 (199)
T 2zki_A 72 DGFAIGSPTRY-GNMAGGLKTFLDTTAILW-KDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVP 143 (199)
T ss_dssp SEEEEEEECBT-TBCCHHHHHHHHTTHHHH-HTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECC
T ss_pred CEEEEECCccc-cCccHHHHHHHHHhhhcc-cccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeC
Confidence 35899999995 899999999999985431 1234889999999987766543456778889999999987653
No 69
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=95.36 E-value=0.029 Score=51.85 Aligned_cols=100 Identities=9% Similarity=-0.049 Sum_probs=69.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCCCCceEEEEeecCCCch--HHHHHHHHHHHHHHHcCC
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQYE--HFNKIAKVVDEILANQGA 70 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l~~~~~avfGlGds~y~--~f~~~~~~~~~~l~~lGa 70 (555)
+.|||++++| .|..|.-.+.|.+++..... +...+.++++++|+.+...|. .|+.+...+...|..+|+
T Consensus 88 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~~l~~~G~ 166 (201)
T 1t5b_A 88 DVIVIAAPMY-NFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGFIGI 166 (201)
T ss_dssp SEEEEECCCB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHHHHHHTTC
T ss_pred CEEEEEeCcc-cCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHHHHhhcCc
Confidence 4689999999 67899999999999974210 112488999999998776664 366677788999999999
Q ss_pred ccccccccccCCCCchhhHHHHHHHHHHHHHh
Q 008747 71 KRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 71 ~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~ 102 (555)
+.+-.......+. .++..+.|+++..+.+..
T Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~ 197 (201)
T 1t5b_A 167 TDVNFVFAEGIAY-GPEVAAKAQADAKAAIDS 197 (201)
T ss_dssp CCEEEEEECCGGG-CHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEecccC-ChHHHHHHHHHHHHHHHH
Confidence 8763322221122 344457887776655543
No 70
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=95.13 E-value=0.033 Score=52.16 Aligned_cols=72 Identities=10% Similarity=-0.051 Sum_probs=56.7
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.|||.+++| .|.+|..++.|++++.... ....+.++++++|+.+...+..+..+...+...|..+|...+-
T Consensus 80 D~ii~gsP~y-~~~~~~~lk~~ld~~~~~~-~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~ 151 (211)
T 1ydg_A 80 EAIVFSSPTR-FGGATSQMRAFIDTLGGLW-SSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTP 151 (211)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHHTTHHHH-HTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECC
T ss_pred CEEEEEcCcc-ccCccHHHHHHHHHhcccc-ccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeC
Confidence 3689999999 5999999999999986431 1234889999999998876644567788899999999987653
No 71
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=94.81 E-value=0.035 Score=57.97 Aligned_cols=82 Identities=11% Similarity=-0.010 Sum_probs=58.1
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.+||.++||+ |++++.++.|+..|.... ++++..|+||.+. |. +.+++.+.++|+++|.+.+-+. ....
T Consensus 322 ~ivlGspT~~-~~~~p~~~~~l~~l~~~~-----~~~K~~~~FGSyG--Ws--g~a~~~~~~~l~~~~~~~v~~~-~~~~ 390 (410)
T 4dik_A 322 ALIFGVSTYE-AEIHPLMRFTLLEIIDKA-----NYEKPVLVFGVHG--WA--PSAERTAGELLKETKFRILSFT-EIKG 390 (410)
T ss_dssp EEEEEECCTT-SSSCHHHHHHHHHHHHHC-----CCCCEEEEEEECC--CC--CTTSCCHHHHHTTSSCEEEEEE-EECS
T ss_pred eEEEEeCCcC-CcCCHHHHHHHHHHHhcc-----cCCCEEEEEECCC--CC--cHHHHHHHHHHHHCCCEEECcE-EEEC
Confidence 5899999996 667778999999998763 6789999999643 21 5678999999999998765332 2222
Q ss_pred CCCchhhHHHHHH
Q 008747 82 DQCIEDDFSAWRE 94 (555)
Q Consensus 82 ~~~~~~~~~~W~~ 94 (555)
....++.+++-.+
T Consensus 391 ~~~de~~lee~~~ 403 (410)
T 4dik_A 391 SNMDERKIEEAIS 403 (410)
T ss_dssp TTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 2233455554433
No 72
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=94.80 E-value=0.043 Score=49.78 Aligned_cols=65 Identities=6% Similarity=0.085 Sum_probs=52.0
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEee-cCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGl-Gds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.+||++++| +|..|.-.+.|.+|+... .+.++.+++||. |... .+..+...+...|..+|++.+
T Consensus 65 D~ii~~tP~y-~~~~p~~lk~~lD~l~~~-----~~~gK~~~~~~~sgg~~--g~~~a~~~l~~~l~~~g~~~v 130 (174)
T 3gfs_A 65 DAIVLLSPEY-HSGMSGALKNALDFLSSE-----QFKYKPVALLAVAGGGD--GGINALNNMRTVMRGVYANVI 130 (174)
T ss_dssp SSEEEEEECS-SSSCCHHHHHHHHTCCHH-----HHTTCEEEEEEECCSTT--CSHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEcCCc-CCCCCHHHHHHHHHhCHh-----hhCCCcEEEEEECCCCh--hHHHHHHHHHHHHHHcCCEEe
Confidence 3589999999 899999999999998653 378999999994 4322 235667889999999999765
No 73
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=93.73 E-value=0.24 Score=45.47 Aligned_cols=70 Identities=9% Similarity=0.086 Sum_probs=54.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.|||++++| .|..|...+.|.+++..... ..+.++++++|+.+...+. ...+...+...|..+|++.+-
T Consensus 74 D~ii~~sP~y-~~~~p~~lK~~iD~~~~~~~--~~l~gK~~~~~~t~gg~~g-~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 74 DALLFATPEY-NYSMAGVLKNAIDWASRPPE--QPFSGKPAAILGASAGRFG-TARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp SEEEEECCEE-TTEECHHHHHHHHHHTCSSS--CTTTTCEEEEEEECSSTTT-THHHHHHHHHHHHHHTCEECC
T ss_pred CEEEEEcccc-ccCcCHHHHHHHHHhccccC--cccCCCeEEEEEeCCCCCc-cHHHHHHHHHHHHHcCCEEcC
Confidence 3589999999 67799999999999975421 3588999999999754442 235668889999999997664
No 74
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=93.63 E-value=0.18 Score=46.27 Aligned_cols=64 Identities=11% Similarity=-0.014 Sum_probs=51.5
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
+.|||++++| .|..|...+.|.+++.. .+.++++++|+.|...- ..+...+...|..+|++.+-
T Consensus 86 D~iI~~sP~y-~~~~p~~lK~~iD~~~~------~l~gK~~~~~~~G~~~~---~~~~~~l~~~l~~~G~~~~~ 149 (191)
T 1t0i_A 86 DIIVFVTPQY-NWGYPAALKNAIDRLYH------EWHGKPALVVSYGGHGG---SKCNDQLQEVLHGLKMNVIG 149 (191)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTCST------TTTTCEEEEEEEETTTT---HHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeceE-CCCCCHHHHHHHHHHHh------hcCCCEEEEEEeCCcch---hhHHHHHHHHHHHCCCEEcc
Confidence 3589999999 58889999999998853 37899999999988542 34667889999999997653
No 75
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=92.16 E-value=0.27 Score=47.00 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=66.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 80 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d 80 (555)
+.|||.+++| .|..|...+.|.+++.... ....+.|++.++|+.+...- ...+...+...|..+|++.+-.....+
T Consensus 81 D~iI~~sP~y-~~~~p~~lK~~iDr~~~~~-~~~~l~gK~~~~i~t~g~~g--~~~~~~~l~~~l~~~G~~~v~~~~~~~ 156 (242)
T 1sqs_A 81 DIIIISSPVY-LQNVSVDTKNFIERIGGWS-HLFRLAGKFVVTLDVAESNG--SDNVSEYLRDIFSYMGGQILHQVSITN 156 (242)
T ss_dssp SEEEEEEEEC-SSSCCHHHHHHHHHTGGGT-TTTTTTTCEEEEEEEESSCC--SCCHHHHHHHHHHHTTCEEEEEEEEEG
T ss_pred CEEEEEcccc-ccCCCHHHHHHHHHHHHhc-cccccCCCEEEEEEeCCCCc--hhhHHHHHHHHHHHCCCeeeeEEEEec
Confidence 4589999999 7889999999999985432 22358899999998654321 124566788899999998664433222
Q ss_pred C-CCCchhhHHHHHHHHHHHHHh
Q 008747 81 D-DQCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 81 ~-~~~~~~~~~~W~~~l~~~l~~ 102 (555)
. .....+.+..+.+.+...+..
T Consensus 157 ~~~~~~~~~~~~~~~~la~~i~~ 179 (242)
T 1sqs_A 157 SLKDIAEAQLMEATYKIEDVLEG 179 (242)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHTT
T ss_pred cCChHHHHHHHHHHHHHHHHHhc
Confidence 2 123445566777776666654
No 76
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=91.93 E-value=0.32 Score=44.92 Aligned_cols=66 Identities=11% Similarity=0.047 Sum_probs=51.0
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.+||++++| +|..|.-.+.|.+|+.. ..+.++..++++.|... ......-..+...|..+|+..+
T Consensus 87 D~ivi~sP~Y-~~~~~~~lK~~iD~~~~-----~~l~gK~~~~v~t~G~~-~~~~~~~~~L~~il~~lg~~vv 152 (191)
T 3k1y_A 87 DGLVVATPVF-KASYTGLFKMFFDILDT-----DALTGMPTIIAATAGSA-RHSLVLDYALRPLLSYMRAVVV 152 (191)
T ss_dssp SEEEEEEECB-TTBSCHHHHHHHHHSCT-----TTTTTCEEEEEEEESSS-TTTTHHHHTHHHHHHHTTCEEC
T ss_pred CEEEEEcCcc-CCcCcHHHHHHHHHhhh-----hhcCCCEEEEEEeCCCc-chhhHHHHHHHHHHHHCCCEEc
Confidence 3589999999 89999999999999964 35899999999988543 2222222347888999999765
No 77
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=91.75 E-value=0.26 Score=43.55 Aligned_cols=55 Identities=9% Similarity=0.021 Sum_probs=42.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILA 66 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~ 66 (555)
+.|||.++||. |.+|..++.|++.+. .+.++.+++|+.|.+.+. .+.+.+.+.+.
T Consensus 78 d~iilG~P~~~-g~~~~~~~~fl~~~~-------~~~~k~~~~~t~gg~~~g---~~~~~l~~~~~ 132 (151)
T 3edo_A 78 DLILIGSPVWS-GYPATPIKTLLDQMK-------NYRGEVASFFTSAGTNHK---AYVSHFNEWAD 132 (151)
T ss_dssp SEEEEEEEEET-TEECTHHHHHHHHTT-------TCCSEEEEEEECSSCCHH---HHHHHHHHHTT
T ss_pred CEEEEEcceec-ccccHHHHHHHHhch-------hcCCEEEEEEEeCCCCCC---cHHHHHHHHcC
Confidence 36899999995 999999999998763 367889999999998763 23455566654
No 78
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=90.66 E-value=0.71 Score=42.83 Aligned_cols=69 Identities=9% Similarity=0.035 Sum_probs=54.5
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.+||++++| +|..|.-.+.|.+|+... ....|.++.+++++.+-..+... .+...+...|..+|+..+
T Consensus 75 D~iVi~tP~Y-~~s~p~~LK~~iD~~~~~--~~~~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~il~~lg~~~v 143 (199)
T 4hs4_A 75 DAVVIVTPEY-NYSVPGVLKNAIDWLSRV--SPQPLAGKPVALVTASPGMIGGA-RAQNHLRQSLVFLDAYVL 143 (199)
T ss_dssp SEEEEEECCB-TTBCCHHHHHHHHHHTTS--SSCTTTTCEEEEEEECSSSSCSH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEcCcc-CCCcCHHHHHHHHHhccc--CCcccCCCEEEEEEeCCCCcccH-HHHHHHHHHHHHcCCEEc
Confidence 3589999999 788999999999999863 23468999999999965554322 245678889999999765
No 79
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=90.46 E-value=0.51 Score=43.62 Aligned_cols=103 Identities=12% Similarity=-0.086 Sum_probs=71.6
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCCCCceEEEEeecCCC--chH--HHHHHHHHHHHHHHc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQ--YEH--FNKIAKVVDEILANQ 68 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l~~~~~avfGlGds~--y~~--f~~~~~~~~~~l~~l 68 (555)
+.|||+++.| ++..|.-.+.|.+++..... +...|.|+++.|+..+... |.. |......+...|.-+
T Consensus 75 D~iV~~~P~y-~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~~~~l~~~l~~~ 153 (196)
T 3lcm_A 75 DHLIFIFPIW-WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGKVLKKQILKPC 153 (196)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTTHHHHHHTTGGG
T ss_pred CEEEEECchh-hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCHHHHHHHHHHhc
Confidence 4689999999 79999999999999964311 1236899999999887766 531 111124566677778
Q ss_pred CCccccccccccCCCCchhhHHHHHHHHHHHHHhhh
Q 008747 69 GAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 104 (555)
Q Consensus 69 Ga~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 104 (555)
|.+.+-.......+...++....|++++.+...+.+
T Consensus 154 G~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~ 189 (196)
T 3lcm_A 154 AISPVKLTELTSIEKISDDERQKLLHKVAQITRNIL 189 (196)
T ss_dssp TCCCEEEEEECSTTTSCHHHHHHHHHHHHHHHHTCC
T ss_pred CCceeeEEEEeCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 998765544444444566778899998877666554
No 80
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=89.32 E-value=0.97 Score=41.77 Aligned_cols=99 Identities=9% Similarity=-0.004 Sum_probs=63.9
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKR 72 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~ 72 (555)
+.|||++++| .|..|.-.+.|.+++..... +...+.+++++++......|..=..+...+...|..+|.+.
T Consensus 96 D~iv~~~P~y-~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~l~~~~~~~G~~~ 174 (208)
T 2hpv_A 96 DKVVIANPMW-NLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVDQ 174 (208)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEEEeccc-cCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchHHHHHHHHHHhCCCCe
Confidence 4689999999 78899999999999864210 11347899999997644445310234566778889999986
Q ss_pred ccccccccCCCCchhhHHHHHHHHHHHHH
Q 008747 73 LVPVGLGDDDQCIEDDFSAWRELVWPELD 101 (555)
Q Consensus 73 i~~~~~~d~~~~~~~~~~~W~~~l~~~l~ 101 (555)
+-.......+. .++..+.|+++..+.+.
T Consensus 175 ~~~~~~~~~~~-~~~~~~~~l~~a~~~~~ 202 (208)
T 2hpv_A 175 VDGLFIEGIDH-FPDRAEELLNTAMTKAT 202 (208)
T ss_dssp EEEEEEECTTT-CGGGHHHHHHHHHHHHH
T ss_pred eeEEEEccccC-CHHHHHHHHHHHHHHHH
Confidence 64333222222 23556677766555443
No 81
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=89.28 E-value=1.5 Score=40.21 Aligned_cols=70 Identities=13% Similarity=0.164 Sum_probs=53.0
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC-----CCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE-----GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~-----~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.+||++++| +|..|.-.+.|.+++..... ....|.|+++++++.+... .+..+...+...|..+|++.+
T Consensus 69 D~iV~~sP~y-~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~--g~~~~~~~l~~~l~~~G~~~v 143 (192)
T 3fvw_A 69 DAIWIFSPVY-NYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGA--SPEEVFEDYRSLLPFIRMHLV 143 (192)
T ss_dssp SEEEEECCCB-TTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC-----CCSHHHHHHHHHTTCEEC
T ss_pred CEEEEECccc-ccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCc--chhHHHHHHHHHHHHcCCeee
Confidence 4689999999 78899999999999985321 1235899999999887763 223345678889999999765
No 82
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=89.03 E-value=1.5 Score=40.39 Aligned_cols=69 Identities=9% Similarity=0.009 Sum_probs=52.6
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.+||++++| +|..|.-.+.|.+|+... ....+.++..++++..-..+... .+...+...|..+|+..+
T Consensus 74 D~iv~~sP~y-~~~~~~~lK~~iD~~~~~--~~~~~~gK~~~~~~~s~g~~gg~-~a~~~Lr~~l~~lg~~v~ 142 (193)
T 3svl_A 74 DGVVIVTPEY-NYSVPGGLKNAIDWLSRL--PDQPLAGKPVLIQTSSMGVIGGA-RCQYHLRQILVFLDAMVM 142 (193)
T ss_dssp SEEEEEECCB-TTBCCHHHHHHHHHHHTS--TTCTTTTCEEEEEEECSSTTTTH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeccc-CCCCCHHHHHHHHHHhhc--CccccCCCeEEEEEeCCCCcchH-HHHHHHHHHHHHCCCEEc
Confidence 3589999999 899999999999999863 23468999999999732223221 245678889999999755
No 83
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=88.53 E-value=2.5 Score=38.37 Aligned_cols=102 Identities=8% Similarity=-0.060 Sum_probs=70.3
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhc---CCCCCCCCceEEEEeecCCC---ch-------HHHHHHHHHHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQK---EGGEWLQKLKYGVFGLGNRQ---YE-------HFNKIAKVVDEILAN 67 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~---~~~~~l~~~~~avfGlGds~---y~-------~f~~~~~~~~~~l~~ 67 (555)
+.|||.++.| .+..|.-.+.|.+.+.... .....|.|+++.++...... |. .+...-+-+...+.-
T Consensus 53 D~iV~~~P~y-~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~p~~~~~~~ 131 (177)
T 3ha2_A 53 DRIILEFPLY-WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANK 131 (177)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTHHHHHHHHH
T ss_pred CEEEEECChh-hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHHHHHHHHHh
Confidence 4689999999 7889999999999875431 12346899999988765544 31 123344445667788
Q ss_pred cCCccccccccccCCCCchhhHHHHHHHHHHHHHhh
Q 008747 68 QGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNL 103 (555)
Q Consensus 68 lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~ 103 (555)
+|.+.+-+......+...++..+.|+++....|...
T Consensus 132 ~G~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~l~~~ 167 (177)
T 3ha2_A 132 TKMMYLPILAVHQFLYLEPDAQQRLLVAYQQYATNV 167 (177)
T ss_dssp TTCEECCCEEEESGGGSCHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEeCeEEEeCCCCCCHHHHHHHHHHHHHHHccc
Confidence 899876554444334456778899998877777643
No 84
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=88.47 E-value=1.7 Score=41.76 Aligned_cols=70 Identities=9% Similarity=-0.030 Sum_probs=52.7
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.|||++++| +|..|.-.+.|.+|+.........+.++..++++.+-..- .. .+...+...|..+|+..+
T Consensus 100 D~iI~~sP~Y-n~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~g-g~-~a~~~Lr~~l~~lg~~~v 169 (247)
T 2q62_A 100 EGQVWVSPER-HGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGSQ-SF-NAVNQMRILGRWMRMITI 169 (247)
T ss_dssp SEEEEEEECS-SSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeCCC-CCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCcc-HH-HHHHHHHHHHHHCCCEEe
Confidence 3589999999 7899999999999996532222358999999999853321 11 355788889999999755
No 85
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=87.85 E-value=4.7 Score=36.96 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=52.9
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+-+||+++.| +|..|.-.+.|.+||.... ....+.++.++++|.+-..+-... +...+...|..+|+..+
T Consensus 69 D~~ii~tPeY-n~s~pg~LKn~iDwlsr~~-~~~~~~gKpv~~v~~S~G~~Gg~~-a~~~Lr~vl~~lg~~v~ 138 (190)
T 3u7r_A 69 DAVLAITPEY-NRSYPGMIKNAIDWATRPY-GQNSWKGKPAAVIGTSPGVIGAAL-AQARLKNDLLHVGTVMM 138 (190)
T ss_dssp SEEEEECCCB-TTBCCHHHHHHHHHHHCST-TCCTTTTCEEEEEEEESSTTTTHH-HHHHHHHHHHTTTCEEC
T ss_pred CcEEEechhh-cccCCHHHHHHHHHhcccc-cCCccCCCEEEEEEeCCchhhHHH-HHHHHHHHHHHcCCEEc
Confidence 3589999999 7999999999999997532 234699999999987655543322 23557778899998654
No 86
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=87.57 E-value=1.6 Score=39.12 Aligned_cols=72 Identities=8% Similarity=-0.010 Sum_probs=53.4
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCC------CCCCCceEEEEeecCCCch-HHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGG------EWLQKLKYGVFGLGNRQYE-HFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~------~~l~~~~~avfGlGds~y~-~f~~~~~~~~~~l~~lGa~~i 73 (555)
+.|||++++| .|..|.-.+.|.+++....... ..+.++++++|+.+..... .+..+.+.+...|..+|++.+
T Consensus 73 D~ii~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~l~~~l~~~G~~~~ 151 (184)
T 1rli_A 73 HILIFATPIY-WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFK 151 (184)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHTHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEEeCcc-ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccchHHHHHHHHHHHHHcCCccc
Confidence 4689999999 7889999999999986432110 1367899999998765321 344466788889999999765
No 87
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=86.36 E-value=5.6 Score=37.30 Aligned_cols=101 Identities=13% Similarity=-0.051 Sum_probs=68.5
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC-------------------CCCCCCCceEEEEeecCCCchH-------H
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE-------------------GGEWLQKLKYGVFGLGNRQYEH-------F 54 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~-------------------~~~~l~~~~~avfGlGds~y~~-------f 54 (555)
+.|||.++.| .+..|.-.+.|++.+..... +...|.|+++.|+-........ |
T Consensus 85 D~iv~~~P~y-~~~~p~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~y~~~g~~~ 163 (218)
T 3rpe_A 85 DTIIYQMPAW-WMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFF 163 (218)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHHHHCTTSTT
T ss_pred CEEEEECChH-hccCCHHHHHHHHHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHhhccccccc
Confidence 4689999999 78999999999999865421 1235789998887665554322 2
Q ss_pred HH-----HHHHHHHHHHHcCCccccccccccCCCCchhhHHHHHHHHHHHHHhhh
Q 008747 55 NK-----IAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 104 (555)
Q Consensus 55 ~~-----~~~~~~~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 104 (555)
+. .-.-+...|.-+|.+.+-+....+... +++++.|+++.-..|.+.+
T Consensus 164 ~g~~~~~~l~p~~~~l~f~G~~~l~~~~~~g~~~--~~~~~~~~~~~~~~L~~~~ 216 (218)
T 3rpe_A 164 HGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIK--QPDIEGDIARYRQHLAENV 216 (218)
T ss_dssp TTCHHHHHTHHHHHHHHHTTCEECCCEEECSTTT--SCCHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEeceEEEeCCCC--hHHHHHHHHHHHHHHHHhc
Confidence 22 222256778889998775554444332 4478888888877777654
No 88
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=85.97 E-value=2.3 Score=41.55 Aligned_cols=70 Identities=9% Similarity=-0.053 Sum_probs=52.7
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 73 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i 73 (555)
+-|||++++| +|..|.-.+.|.+|+.........+.++..++++.+-.. ..+ .+...+...|..+|+..+
T Consensus 125 DgiV~aSP~Y-n~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG~~-gg~-~a~~~Lr~~l~~lg~~vv 194 (279)
T 2fzv_A 125 EGQVWCSPER-HGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGGS-QSF-NAVNTLRLLGRWMRMFTI 194 (279)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSSS-CCC-HHHHHHHHHHHHTTCEEC
T ss_pred CeEEEEcCcc-ccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECCCc-cHH-HHHHHHHHHHHhcCcEEe
Confidence 3589999999 899999999999999654222235899999999985332 222 245678888999998755
No 89
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=85.95 E-value=2.9 Score=38.72 Aligned_cols=100 Identities=8% Similarity=-0.031 Sum_probs=66.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhc-------C--C---CCCCCCceEEEEeecC--CCch-----HHHHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQK-------E--G---GEWLQKLKYGVFGLGN--RQYE-----HFNKIAKVV 61 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~-------~--~---~~~l~~~~~avfGlGd--s~y~-----~f~~~~~~~ 61 (555)
+.|||++++| ++..|.-.+.|.+++.... . + ...|.|+++.++.-.. ..|. .+......+
T Consensus 89 D~iV~~~P~y-~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~~~l 167 (212)
T 3r6w_A 89 DLLVISTPMY-NFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWL 167 (212)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGGGCCSHHHH
T ss_pred CEEEEEcCcc-cccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCchhhhHHHH
Confidence 4689999999 7889999999999995421 1 1 2358899988886633 3342 234445667
Q ss_pred HHHHHHcCCccccccccccCCCCchhhHHHHHHHHHHHHHh
Q 008747 62 DEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 62 ~~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~ 102 (555)
...|.-+|.+.+-.. ........++..+.|++.....+.+
T Consensus 168 ~~~l~~~G~~~~~~v-~~~g~~~~~~~~~~~l~~a~~~~~~ 207 (212)
T 3r6w_A 168 RTALGFIGIDEVTVV-AAEGEESGGRSFEDSCDEAEQRLLA 207 (212)
T ss_dssp HHHHHHHTCCEEEEE-EECCTTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCceeEEE-EEecccCCHHHHHHHHHHHHHHHHH
Confidence 888889999876333 2232223456677777766555543
No 90
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=85.58 E-value=2.1 Score=39.88 Aligned_cols=100 Identities=11% Similarity=0.061 Sum_probs=67.3
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCCCCceEEEEeecCCCch-----HHHHHHHHHHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQYE-----HFNKIAKVVDEILAN 67 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l~~~~~avfGlGds~y~-----~f~~~~~~~~~~l~~ 67 (555)
+.|||+++.| ++..|.-.+.|.+++..... +...|.++++.++..-...|. .|......+...|.-
T Consensus 94 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~l~~~l~~ 172 (211)
T 3p0r_A 94 DKVVFGFPLW-NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGF 172 (211)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBSHHHHHHHHHH
T ss_pred CEEEEEcChh-cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHHHHHHHHHHHh
Confidence 4689999999 78899999999999864321 123588999998875444452 234445667888999
Q ss_pred cCCccccccccccCCCCchhhHHHHHHHHHHHHHh
Q 008747 68 QGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 68 lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~ 102 (555)
+|.+.+-.......+. .++.-+.|+++....+.+
T Consensus 173 ~G~~~v~~i~~~g~~~-~~~~~~~~l~~a~~~~~~ 206 (211)
T 3p0r_A 173 FGATNMETVVIEGHNQ-FPDKAEEIITAGLEEAAK 206 (211)
T ss_dssp TTCCSCEEEEEECTTT-SGGGHHHHHHHHHHHHHH
T ss_pred CCCCeeeEEEEecccc-CchHHHHHHHHHHHHHHH
Confidence 9998764433222222 344677888776665543
No 91
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=84.80 E-value=1.8 Score=42.87 Aligned_cols=51 Identities=14% Similarity=0.378 Sum_probs=43.3
Q ss_pred cCCCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecC
Q 008747 150 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCEN 201 (555)
Q Consensus 150 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N 201 (555)
++...|+.++|+.+++++..+...++++|+|+.+ ..+.|+||.++.|.++.
T Consensus 28 ~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~-~~~~~~pGQ~v~l~~~~ 78 (310)
T 3vo2_A 28 YKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTE-GEIPYREGQSIGIIADG 78 (310)
T ss_dssp BBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECT-TCCCCCTTCEEEEECSS
T ss_pred ecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCC-CCCcccCCCEEEEECCC
Confidence 4456788999999999998777788999999964 46889999999998864
No 92
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=84.74 E-value=5.4 Score=36.82 Aligned_cols=75 Identities=12% Similarity=-0.035 Sum_probs=51.9
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhc-------------------CCCCCCCCceEEEEeecCCCchHH-------
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQK-------------------EGGEWLQKLKYGVFGLGNRQYEHF------- 54 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~-------------------~~~~~l~~~~~avfGlGds~y~~f------- 54 (555)
+.|||+++.| .+..|.-.+.|.+.+.... .+...|.+++++++.........|
T Consensus 72 D~iV~~~P~y-~~s~pa~LK~~iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~y~~~g~~~ 150 (204)
T 2amj_A 72 DVVIWQMPGW-WMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFF 150 (204)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHHHHCTTSSS
T ss_pred CEEEEECCcc-ccCCCHHHHHHHHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHHHccCcccc
Confidence 4689999999 7889999999999764321 012358999999988765543222
Q ss_pred -----HHHHHHHHHHHHHcCCcccccc
Q 008747 55 -----NKIAKVVDEILANQGAKRLVPV 76 (555)
Q Consensus 55 -----~~~~~~~~~~l~~lGa~~i~~~ 76 (555)
..+...+...|.-+|++.+-+.
T Consensus 151 ~~~~~~~~l~~l~~~l~~~G~~~~~~~ 177 (204)
T 2amj_A 151 HGVGVDGVYLPFHKANQFLGMEPLPTF 177 (204)
T ss_dssp CSCCHHHHTHHHHHHHHHTTCEECCCE
T ss_pred cCCCHHHHHHHHHHHHHHcCCeecceE
Confidence 1222336778888999876443
No 93
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=84.79 E-value=0.19 Score=46.74 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=52.7
Q ss_pred eEEEEeccCCCCccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008747 2 KIYVIGCRYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 74 (555)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~ 74 (555)
.|||++++| +|..|.-.+.|.+|+..... ..+.++.+++++.+...+. ...+...+...|..+|+..+-
T Consensus 76 ~iIi~tP~Y-~~s~p~~lK~~iD~l~~~~~--~~l~gK~v~~v~tsgg~~g-~~~a~~~Lr~~l~~lg~~~v~ 144 (199)
T 3s2y_A 76 AVVIVTPEY-NYSVPGVLKNAIDWLSRVSP--QPLAGKPVALVTASPGMIG-GARAQYHLRQSLVFLDAYVLN 144 (199)
Confidence 589999999 67899999999999975421 1588999999997544332 334567788888899987663
No 94
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=80.96 E-value=3.7 Score=38.75 Aligned_cols=104 Identities=13% Similarity=-0.087 Sum_probs=68.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCCCCceEEEEeecCCC---ch--HHHHHHHHH----H-
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQ---YE--HFNKIAKVV----D- 62 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l~~~~~avfGlGds~---y~--~f~~~~~~~----~- 62 (555)
+.|||+++.| .|..|.-.+.|.+++..... ....|.|+++.++...... |. .++...+.+ .
T Consensus 94 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~~~~y~~~g~~~~~~~~l~p~~~ 172 (228)
T 3tem_A 94 DLVIFQFPLY-WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQH 172 (228)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSCTTTTSTTSTTCCHHHHHHHHHC
T ss_pred CEEEEECChh-hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCCHHHHhhccccCCHHHHHHHHHH
Confidence 4689999999 78999999999999864321 1246899999988654432 53 133222221 1
Q ss_pred HHHHHcCCccccccccccCCCCchhhHHHHHHHHHHHHHhhhC
Q 008747 63 EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLR 105 (555)
Q Consensus 63 ~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~~ 105 (555)
..|.-+|.+.+-+....+.....++....|+++....|.....
T Consensus 173 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 215 (228)
T 3tem_A 173 GTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWK 215 (228)
T ss_dssp CCCCTTTCEECCCEEECCTTTSCHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHhCCceEcCeEEEcCCCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 1333467776655545555555677888999988888876653
No 95
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=80.82 E-value=9.9 Score=34.79 Aligned_cols=102 Identities=11% Similarity=-0.076 Sum_probs=63.3
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC----CCCCCCCceEEEEeecCCC---ch-------HHHHHHHHHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE----GGEWLQKLKYGVFGLGNRQ---YE-------HFNKIAKVVDEILA 66 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~----~~~~l~~~~~avfGlGds~---y~-------~f~~~~~~~~~~l~ 66 (555)
+.|||.++.| .+..|.-.+.|.+++..... ....|.|+++.++...... |. .+...-+-+...|.
T Consensus 60 D~iv~~~P~y-~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l~pl~~~~~ 138 (192)
T 3f2v_A 60 DSLVWQFPIY-WFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVLRPFELTAK 138 (192)
T ss_dssp SSEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHHHHHHHHHH
T ss_pred CEEEEEcChh-hcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHHHHHHHHHH
Confidence 3589999999 78899999999999864321 1246899999988765544 42 22333444677888
Q ss_pred HcCCccccccccccCCCC------chhhHHHHHHHHHHHHHhh
Q 008747 67 NQGAKRLVPVGLGDDDQC------IEDDFSAWRELVWPELDNL 103 (555)
Q Consensus 67 ~lGa~~i~~~~~~d~~~~------~~~~~~~W~~~l~~~l~~~ 103 (555)
-+|.+.+-+....+.... .+++++...++....|.+.
T Consensus 139 f~G~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~~~l~~~ 181 (192)
T 3f2v_A 139 YCNADYRPPFTFHTIDSNAGYSEAARQEVERSARDYLAWLDAL 181 (192)
T ss_dssp HTTCEECCCEEEEC-------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCeEeeeEEEeccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 899987644443333221 2344555554444444443
No 96
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=77.13 E-value=7.3 Score=37.72 Aligned_cols=103 Identities=12% Similarity=-0.157 Sum_probs=63.6
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCCCCceEEEEeecCCC---chH--HH----HHHHH-HH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWLQKLKYGVFGLGNRQ---YEH--FN----KIAKV-VD 62 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l~~~~~avfGlGds~---y~~--f~----~~~~~-~~ 62 (555)
+.|||.++.| .+..|.-.+.|.+++..... +...|.|+++.++...... |.. ++ ..... +.
T Consensus 95 D~IV~~~P~y-~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~~~~y~~~g~~~~~~~~~~~~~~ 173 (273)
T 1d4a_A 95 DLVIFQFPLQ-WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQS 173 (273)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSCTGGGSTTBTTCCHHHHHHHHHT
T ss_pred CEEEEECchh-hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCChHHhcccccCCCHHHHHHHHHH
Confidence 4689999999 78899999999999864321 1245889999888765444 421 11 12222 22
Q ss_pred HHHHHcCCccccccccccCCCCchhhHHHHHHHHHHHHHhhh
Q 008747 63 EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 104 (555)
Q Consensus 63 ~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 104 (555)
..|.-+|.+.+-+..........++..+.|+++....+....
T Consensus 174 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~ 215 (273)
T 1d4a_A 174 GILHFCGFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIW 215 (273)
T ss_dssp TTTGGGTCEECCCEEETTGGGSCHHHHHHHHHHHHHHHTTGG
T ss_pred HHHHhCCCeeeeEEEEeccccCCHHHHHHHHHHHHHHHHHHH
Confidence 355678887664433332222334566677777666666554
No 97
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=73.86 E-value=9.7 Score=35.68 Aligned_cols=101 Identities=8% Similarity=-0.064 Sum_probs=67.0
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC--------CCCCC-CCceEEEEeecCCCc------hHHHHHHHHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE--------GGEWL-QKLKYGVFGLGNRQY------EHFNKIAKVVDEIL 65 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~--------~~~~l-~~~~~avfGlGds~y------~~f~~~~~~~~~~l 65 (555)
+.|||+++.| ++..|.-.+.|.+++..... +...+ .+++..|+..-...| ..+......+...|
T Consensus 96 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~~~~~~~~~l~~~l 174 (223)
T 3u7i_A 96 NTYVIVLPLH-NFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMF 174 (223)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHHHTCHHHHHHHHHH
T ss_pred CEEEEEcChh-hccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccchHHHHHHHHHHHH
Confidence 4689999999 78899999999999875421 11236 789888887644444 23445566788889
Q ss_pred HHcCCccccccccccC-CCCchhhHHHHHHHHHHHHHh
Q 008747 66 ANQGAKRLVPVGLGDD-DQCIEDDFSAWRELVWPELDN 102 (555)
Q Consensus 66 ~~lGa~~i~~~~~~d~-~~~~~~~~~~W~~~l~~~l~~ 102 (555)
.-+|++.+-.+..... ....++.++.+.+.+-....+
T Consensus 175 ~~~G~~~~~~i~~~g~~~~~~~~~~~~a~~~~~~~~~~ 212 (223)
T 3u7i_A 175 NFLGIEDYQIVRAQGTAVLDPTEVLQNAYKEVEEAASR 212 (223)
T ss_dssp HHHTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCceeEEEEEcCccCCCHHHHHHHHHHHHHHHHHH
Confidence 9999987643322222 224566777777765554443
No 98
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=67.11 E-value=25 Score=36.13 Aligned_cols=102 Identities=11% Similarity=-0.034 Sum_probs=63.1
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhc----CCCCCCCCceEEEEeecCCC---ch-----HHHHHHHHHHHHHHHc
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQK----EGGEWLQKLKYGVFGLGNRQ---YE-----HFNKIAKVVDEILANQ 68 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~----~~~~~l~~~~~avfGlGds~---y~-----~f~~~~~~~~~~l~~l 68 (555)
+.|||.++.| ++..|.-.+.|++++.... .....|.|+++.++...... |. .|...-.-+...|.-+
T Consensus 294 D~iv~~~P~y-w~~~Pa~lK~~iDrv~~~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~l~~~~~~~ 372 (413)
T 3l9w_A 294 DLIVWQHPMQ-WYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYC 372 (413)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHHHHHHHHHT
T ss_pred CEEEEECchh-hccCCHHHHHHHHHHHhcCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHHHHHHHHhC
Confidence 4689999999 7889999999999986432 12335899998877553322 21 1223335567778889
Q ss_pred CCccccccccccCCCCchhhHHHHHHHHHHHHHhh
Q 008747 69 GAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNL 103 (555)
Q Consensus 69 Ga~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~ 103 (555)
|.+.+-+........-.+++...+++.....|...
T Consensus 373 G~~~l~~~~~~g~~~~~d~~~~~~~~~~~~~L~~~ 407 (413)
T 3l9w_A 373 GLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEW 407 (413)
T ss_dssp TCEECCCEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeecceEEEcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99866443332222333455555555555555443
No 99
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=61.21 E-value=17 Score=35.57 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=40.2
Q ss_pred CCCCeeeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecC
Q 008747 152 AQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCEN 201 (555)
Q Consensus 152 ~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N 201 (555)
...++.++|+..+.++.++...++++|.|..+. ...|+||.++.|..+.
T Consensus 25 ~~~~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~-~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 25 PKEPFTATIVSVESLVGPKAPGETCHIVIDHGG-NVPYWEGQSYGVIPPG 73 (311)
T ss_dssp TTBCEEEEEEEEEECSCTTSSSCEEEEEEECTT-SSCCCTTCEEEEECSS
T ss_pred CCCCeEEEEEeeEeccCCCCCCccEEEEEeCCC-CCcccCCCEEEEeCCC
Confidence 445678999999999866666789999999764 5899999999998764
No 100
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=44.21 E-value=21 Score=31.84 Aligned_cols=59 Identities=14% Similarity=0.195 Sum_probs=42.1
Q ss_pred CCCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCCCCchhhHHHHH
Q 008747 35 WLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWR 93 (555)
Q Consensus 35 ~l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~ 93 (555)
.....+++|+-.||..-..++.-+..+.++|.++|++...-....|+.....+.+..|.
T Consensus 7 ~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~ 65 (172)
T 1mkz_A 7 EFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWI 65 (172)
T ss_dssp SCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHH
Confidence 36678999999999977778888888999999999875543334444333444444443
No 101
>2xpn_B SPT6, chromatin structure modulator; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.95A {Encephalitozoon cuniculi} PDB: 2xpo_B
Probab=41.58 E-value=11 Score=22.02 Aligned_cols=12 Identities=25% Similarity=0.769 Sum_probs=9.8
Q ss_pred CceEEEEeecCC
Q 008747 38 KLKYGVFGLGNR 49 (555)
Q Consensus 38 ~~~~avfGlGds 49 (555)
.+-|-|||+||-
T Consensus 3 slFyEIFGtG~E 14 (26)
T 2xpn_B 3 HMFFEIFGTGEE 14 (26)
T ss_pred cEEEEEecCCce
Confidence 467899999984
No 102
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.55 E-value=31 Score=34.46 Aligned_cols=25 Identities=24% Similarity=0.293 Sum_probs=20.7
Q ss_pred CCeEEEccCCc--cchhHHHHHHHHHH
Q 008747 405 VPIIMIGPGTG--LAPFRGFLQERFAL 429 (555)
Q Consensus 405 ~piimIa~GTG--iAPf~s~l~~~~~~ 429 (555)
+.|++.||||| |-|.+++.++....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC
Confidence 45889999997 88999999987653
No 103
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=30.32 E-value=1.7e+02 Score=28.09 Aligned_cols=103 Identities=11% Similarity=-0.069 Sum_probs=64.7
Q ss_pred CeEEEEeccCCCCccCccHHHHHHHHHhhcC----------------CCCCCCCceEEEEeecCCC---ch--HHHHHHH
Q 008747 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEQKE----------------GGEWLQKLKYGVFGLGNRQ---YE--HFNKIAK 59 (555)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~----------------~~~~l~~~~~avfGlGds~---y~--~f~~~~~ 59 (555)
+.|||+.+.| .+..|.-.+.|.+....... +...|.|+++.++-.-+.. |. -|+....
T Consensus 114 D~iv~~~P~~-w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g~~~~~y~~~g~~~~~~ 192 (280)
T 4gi5_A 114 DTVIFQFPLW-WFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGWAEHYSPRGINGPID 192 (280)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECSSCGGGGSTTBTTCCHH
T ss_pred CEEEEEeccc-cccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecCCChHHccccccCCCHH
Confidence 4689999999 78899999999998864321 1235788888766444433 42 2333222
Q ss_pred HHHHHH-----HHcCCccccccccccCCCCchhhHHHHHHHHHHHHHhhh
Q 008747 60 VVDEIL-----ANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 104 (555)
Q Consensus 60 ~~~~~l-----~~lGa~~i~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 104 (555)
.+-..+ .-.|.+.+-+....+.+...++.+..|++.+-+.|....
T Consensus 193 ~~l~~~~~~~~~~~Gm~~l~~f~~~~~~~~~~~~~~~~~~~~~~~L~~l~ 242 (280)
T 4gi5_A 193 DILFPIQHGMLFYPGFEVLPPLVFYRTDKTDAGQFADQCAALAERLDTLW 242 (280)
T ss_dssp HHTHHHHCCCCCTTTCEECCCEEECSGGGCCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCCeECCcEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 221111 124666655555545555667788999988888777664
No 104
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=30.29 E-value=92 Score=23.91 Aligned_cols=26 Identities=0% Similarity=-0.049 Sum_probs=21.4
Q ss_pred HHcCCCCHHHHHHHHHHHHHCCCEEE
Q 008747 527 QEQGSLDSSKAESMVKNLQMTGRYLR 552 (555)
Q Consensus 527 ~~~~~~~~~~a~~~~~~l~~~~Ry~~ 552 (555)
++..|++..+..+.+++|+++|+..-
T Consensus 41 ae~~GvdKKeVdKaik~LKkEgkI~S 66 (80)
T 2lnb_A 41 VKECQAPKRELNQVLYRMKKELKVSL 66 (80)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHCCCHHHHHHHHHHHHHcCCccC
Confidence 34457888999999999999998753
No 105
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=27.23 E-value=60 Score=30.19 Aligned_cols=43 Identities=9% Similarity=0.187 Sum_probs=32.7
Q ss_pred CCeeeEEEeeeecCCCCCCCcEEEEEEEe-c-CC---CccccCCCeEEEeecC
Q 008747 154 HPCRSNVAVRKELHTPSSDRSCTHLEFDI-A-GT---GLTYETGDHVGVYCEN 201 (555)
Q Consensus 154 ~~~~~~v~~~~~l~~~~~~~~~~~i~~~~-~-~~---~~~y~~GD~i~i~p~N 201 (555)
.++.++|+..+.++. +++.++|.. + +. ...|+||.++.|..++
T Consensus 9 ~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~ 56 (250)
T 1tvc_A 9 GSFEAEVVGLNWVSS-----NTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG 56 (250)
T ss_dssp SEEEEEBCCCEEEET-----TEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS
T ss_pred ceEEEEEEEEEEcCC-----CeEEEEEEecCCCCcccccCcCCCcEEEEEeCC
Confidence 345678888888864 588898887 5 42 5789999999998754
No 106
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=27.22 E-value=99 Score=29.32 Aligned_cols=41 Identities=10% Similarity=0.195 Sum_probs=32.5
Q ss_pred eeeEEEeeeecCCCCCCCcEEEEEEEecC-CCccccCCCeEEEeecC
Q 008747 156 CRSNVAVRKELHTPSSDRSCTHLEFDIAG-TGLTYETGDHVGVYCEN 201 (555)
Q Consensus 156 ~~~~v~~~~~l~~~~~~~~~~~i~~~~~~-~~~~y~~GD~i~i~p~N 201 (555)
+.++|+.++.++. +++.|.|..++ ..+.|+||.++.|..+.
T Consensus 10 ~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~ 51 (290)
T 2r6h_A 10 WECEVLSNKNVST-----FIKEFVVKLPEGETMNFKSGSYAQIKIPK 51 (290)
T ss_dssp EEEEEEEEEESSS-----SEEEEEEECSTTCCCCCCTTCEEEEEECS
T ss_pred EEEEEEEeeecCC-----CeEEEEEEcCCCCccccCCCceEEEEccc
Confidence 4678888888874 58889998764 35789999999997664
No 107
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=26.26 E-value=21 Score=31.62 Aligned_cols=57 Identities=18% Similarity=0.160 Sum_probs=37.6
Q ss_pred CCCceEEEEeecCCCc--hHHHHHHHHHHHHHHHcCCccccccccccCCCCchhhHHHHH
Q 008747 36 LQKLKYGVFGLGNRQY--EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWR 93 (555)
Q Consensus 36 l~~~~~avfGlGds~y--~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W~ 93 (555)
....+++|+-.||.-+ .-++.-+..+.++|+++|++...-....|+ +...+.+..|.
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~ 63 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAI 63 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHH
Confidence 4567999999999876 356777888999999999976543333444 44555555554
No 108
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.50 E-value=17 Score=32.80 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=33.8
Q ss_pred CCCCceEEEEeecCCCc-------hHHHHHHHHHHHHHHHcCCccccccccccC
Q 008747 35 WLQKLKYGVFGLGNRQY-------EHFNKIAKVVDEILANQGAKRLVPVGLGDD 81 (555)
Q Consensus 35 ~l~~~~~avfGlGds~y-------~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~ 81 (555)
.....+++|+-.||..+ .-++.-+..+.++|+++|++...-....|+
T Consensus 12 ~~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd 65 (178)
T 2pjk_A 12 APKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDD 65 (178)
T ss_dssp -CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSC
T ss_pred CCCCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCC
Confidence 46779999999999655 246667788999999999975433333344
No 109
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=22.57 E-value=74 Score=25.83 Aligned_cols=75 Identities=15% Similarity=0.052 Sum_probs=49.8
Q ss_pred ccCccHHHHHHHHHhhcCCCCCCCCceEEEEeecCC---CchHHHHHHHHHHHHHHHcCCccccccccccCCCCchhhHH
Q 008747 14 EPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNR---QYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFS 90 (555)
Q Consensus 14 ~~p~n~~~f~~~l~~~~~~~~~l~~~~~avfGlGds---~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~~~~~~~~~~ 90 (555)
+..+--....+.|++ +|++|-+=.+|-. .|+.--.+.+++++.+.+.|+.|+.=..+.|...+....++
T Consensus 21 svs~~Va~~i~~i~~--------sGl~y~~~pm~T~IEGe~devm~vv~~~~e~~~~~G~~RV~~~iKid~R~d~~~~~~ 92 (104)
T 1lxj_A 21 SISDFVALIEKKIRE--------SPLKSTLHSAGTTIEGPWDDVMGLIGEIHEYGHEKGYVRVHTDIRVGTRTDKHQTAQ 92 (104)
T ss_dssp CCHHHHHHHHHHHHT--------SSSEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECCSSCCCCHH
T ss_pred CHHHHHHHHHHHHHH--------cCCCeEeCCCccEEEcCHHHHHHHHHHHHHHHHHcCCCeEEEEEEEEecCCCCCCHH
Confidence 444545566677763 3566655444332 28888889999999999999999988888887544344444
Q ss_pred HHHHHH
Q 008747 91 AWRELV 96 (555)
Q Consensus 91 ~W~~~l 96 (555)
.=.+.+
T Consensus 93 ~Kv~~v 98 (104)
T 1lxj_A 93 DKIDVV 98 (104)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 110
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=22.44 E-value=86 Score=29.42 Aligned_cols=41 Identities=10% Similarity=-0.019 Sum_probs=31.7
Q ss_pred eeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCC
Q 008747 157 RSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENL 202 (555)
Q Consensus 157 ~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N~ 202 (555)
.++|+..+.++. +++.|+|..++....|+||.++.|..++.
T Consensus 7 ~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~ 47 (262)
T 1ep3_B 7 MMTVVSQREVAY-----NIFEMVLKGTLVDEMDLPGQFLHLAVPNG 47 (262)
T ss_dssp EEEEEEEEEEET-----TEEEEEEESGGGGGCCSTTCEEEECCSCT
T ss_pred ceEEEEEEEecC-----CEEEEEEEcCcccccCCCCceEEEEcCCC
Confidence 578888888874 58888888664346899999999987653
No 111
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=22.02 E-value=1.3e+02 Score=27.30 Aligned_cols=39 Identities=8% Similarity=0.192 Sum_probs=30.5
Q ss_pred eeEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecC
Q 008747 157 RSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCEN 201 (555)
Q Consensus 157 ~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~i~i~p~N 201 (555)
.++|+..+.+++ +++.++|..+ ....|+||.++.|..++
T Consensus 4 ~~~V~~~~~~~~-----~~~~l~l~~~-~~~~~~pGq~v~l~~~~ 42 (232)
T 1qfj_A 4 SCKVTSVEAITD-----TVYRVRIVPD-AAFSFRAGQYLMVVMDE 42 (232)
T ss_dssp EEEEEEEEESSS-----SCEEEEEEES-SCCCCCTTCEEEEESSS
T ss_pred EEEEEEEEecCC-----CEEEEEEecC-CCCCcCCCCEEEEECCC
Confidence 567888888864 5788888865 36799999999998753
No 112
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=21.99 E-value=1.3e+02 Score=29.25 Aligned_cols=42 Identities=14% Similarity=0.231 Sum_probs=33.3
Q ss_pred CeeeEEEeeeecCCCCCCCcEEEEEEEecCC--CccccCCCeEEEeecC
Q 008747 155 PCRSNVAVRKELHTPSSDRSCTHLEFDIAGT--GLTYETGDHVGVYCEN 201 (555)
Q Consensus 155 ~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~--~~~y~~GD~i~i~p~N 201 (555)
++.++|+..+.++. +++.|.|..++. ...|+||.++.|..++
T Consensus 108 ~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 151 (338)
T 1krh_A 108 HFEGTLARVENLSD-----STITFDIQLDDGQPDIHFLAGQYVNVTLPG 151 (338)
T ss_dssp EEEEEEEEEEESSS-----SEEEEEEEECTTCCCCCCCTTCEEEEECTT
T ss_pred EEEEEEEEEEEcCC-----CEEEEEEEeCCCCCCCCcCCCCeEEEEcCC
Confidence 34678888888874 588999988753 5889999999998764
No 113
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=21.26 E-value=45 Score=29.50 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=37.6
Q ss_pred CCCceEEEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCCCCchhhHHHH
Q 008747 36 LQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 92 (555)
Q Consensus 36 l~~~~~avfGlGds~y~~f~~~~~~~~~~l~~lGa~~i~~~~~~d~~~~~~~~~~~W 92 (555)
....+++|+-.||.--..++.-+..+.++|.++|++...-....|+.....+.+..|
T Consensus 11 ~~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~ 67 (169)
T 1y5e_A 11 PKEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAG 67 (169)
T ss_dssp -CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHH
T ss_pred ccCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 467899999999987445666677899999999987543333334433333344444
No 114
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=20.80 E-value=1.7e+02 Score=27.38 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=32.3
Q ss_pred CCeeeEEEeeeecCCCCCCCcEEEEEEEecCC--CccccCCCeEEEeec
Q 008747 154 HPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT--GLTYETGDHVGVYCE 200 (555)
Q Consensus 154 ~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~--~~~y~~GD~i~i~p~ 200 (555)
....++|+..+.++. +++.+.|.+++. ...|+||.++.|..+
T Consensus 15 ~~~~~~V~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 58 (275)
T 1umk_A 15 IKYPLRLIDREIISH-----DTRRFRFALPSPQHILGLPVGQHIYLSAR 58 (275)
T ss_dssp CCEEEEEEEEEECSS-----SEEEEEEECSSTTCBCCCCTTCEEEEEEE
T ss_pred ccEEEEEEEEEEcCC-----CeEEEEEEcCCcccccCCCCCcEEEEEEe
Confidence 345678888888864 578888887642 468999999999864
No 115
>2b4n_A Gastric inhibitory polypeptide; GIP, molecular modelling, helix, diabetes, obesity, hormone/growth factor complex; NMR {Homo sapiens} PDB: 2l70_A 2l71_A 2obu_A 2qkh_B*
Probab=20.42 E-value=83 Score=21.12 Aligned_cols=19 Identities=21% Similarity=0.352 Sum_probs=13.1
Q ss_pred cHHHHHHHHHhhcCCCCCC
Q 008747 18 NAARFYKWFTEQKEGGEWL 36 (555)
Q Consensus 18 n~~~f~~~l~~~~~~~~~l 36 (555)
-+++|.+||.+....+.++
T Consensus 18 ~akdFv~WL~~~k~~~~d~ 36 (42)
T 2b4n_A 18 HQQDFVNWLLAQKGKKNDW 36 (42)
T ss_dssp HHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhCCCcCcch
Confidence 3679999999765444333
Done!