Query 008748
Match_columns 555
No_of_seqs 617 out of 3270
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 10:48:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vl5_A Unknown conserved prote 99.6 7.5E-15 2.6E-19 145.3 16.5 134 155-291 37-190 (260)
2 4hg2_A Methyltransferase type 99.6 4.7E-16 1.6E-20 156.1 6.6 96 157-260 41-138 (257)
3 3bus_A REBM, methyltransferase 99.6 1.1E-14 3.6E-19 145.0 15.0 150 132-291 46-216 (273)
4 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.2E-15 4.1E-20 149.8 7.2 134 155-291 93-238 (254)
5 3hnr_A Probable methyltransfer 99.6 1.4E-14 4.8E-19 139.3 13.7 133 156-295 46-205 (220)
6 3dlc_A Putative S-adenosyl-L-m 99.6 1E-14 3.4E-19 139.1 12.6 151 128-289 25-201 (219)
7 1nkv_A Hypothetical protein YJ 99.6 1.1E-14 3.8E-19 143.2 13.1 148 129-287 18-183 (256)
8 3kkz_A Uncharacterized protein 99.6 3.3E-14 1.1E-18 141.4 16.5 133 155-290 46-195 (267)
9 3f4k_A Putative methyltransfer 99.6 3.4E-14 1.2E-18 139.8 16.2 130 156-288 47-193 (257)
10 2o57_A Putative sarcosine dime 99.6 2.2E-14 7.7E-19 144.7 14.9 135 155-291 82-234 (297)
11 1xxl_A YCGJ protein; structura 99.6 3.8E-14 1.3E-18 139.0 16.0 135 155-291 21-174 (239)
12 2p7i_A Hypothetical protein; p 99.6 6.6E-15 2.3E-19 143.0 10.4 127 157-290 44-198 (250)
13 3dh0_A SAM dependent methyltra 99.5 3E-14 1E-18 136.9 13.4 134 156-290 38-180 (219)
14 3ujc_A Phosphoethanolamine N-m 99.5 2.7E-14 9.4E-19 140.6 13.2 131 155-291 55-206 (266)
15 3g5l_A Putative S-adenosylmeth 99.5 1.8E-14 6E-19 141.9 11.1 131 155-291 44-216 (253)
16 3h2b_A SAM-dependent methyltra 99.5 1.7E-14 5.7E-19 137.2 10.2 130 157-292 43-183 (203)
17 3mgg_A Methyltransferase; NYSG 99.5 4.5E-14 1.5E-18 140.8 13.3 136 155-291 37-198 (276)
18 3sm3_A SAM-dependent methyltra 99.5 5.3E-14 1.8E-18 135.8 13.0 134 156-291 31-207 (235)
19 3l8d_A Methyltransferase; stru 99.5 2.4E-14 8.1E-19 139.5 10.3 129 156-290 54-199 (242)
20 3vc1_A Geranyl diphosphate 2-C 99.5 5.9E-14 2E-18 143.4 13.5 135 155-292 117-270 (312)
21 3dli_A Methyltransferase; PSI- 99.5 2.6E-14 9E-19 139.9 10.3 125 156-290 42-183 (240)
22 3gu3_A Methyltransferase; alph 99.5 9.5E-14 3.3E-18 139.9 14.6 102 155-259 22-128 (284)
23 2ex4_A Adrenal gland protein A 99.5 1.8E-14 6.1E-19 141.2 8.9 137 155-292 79-226 (241)
24 4gek_A TRNA (CMO5U34)-methyltr 99.5 4.7E-14 1.6E-18 141.6 12.1 101 156-259 71-180 (261)
25 3dtn_A Putative methyltransfer 99.5 6E-14 2.1E-18 136.3 12.4 101 155-259 44-150 (234)
26 4htf_A S-adenosylmethionine-de 99.5 7.8E-14 2.7E-18 140.0 12.8 135 156-292 69-233 (285)
27 1y8c_A S-adenosylmethionine-de 99.5 2.8E-13 9.6E-18 131.6 15.4 119 133-259 21-144 (246)
28 3ou2_A SAM-dependent methyltra 99.5 1.1E-13 3.9E-18 132.1 12.1 128 156-290 47-204 (218)
29 3jwg_A HEN1, methyltransferase 99.5 2.2E-13 7.6E-18 131.1 14.0 150 130-288 12-189 (219)
30 2yqz_A Hypothetical protein TT 99.5 8.4E-14 2.9E-18 137.1 10.9 99 156-256 40-140 (263)
31 2p35_A Trans-aconitate 2-methy 99.5 7.8E-14 2.7E-18 137.2 10.6 98 156-260 34-135 (259)
32 3e23_A Uncharacterized protein 99.5 6E-14 2.1E-18 134.3 9.5 128 156-291 44-182 (211)
33 4fsd_A Arsenic methyltransfera 99.5 8E-14 2.8E-18 147.0 11.3 135 155-290 83-250 (383)
34 3g2m_A PCZA361.24; SAM-depende 99.5 2.4E-13 8.2E-18 137.7 14.2 101 157-259 84-192 (299)
35 1vlm_A SAM-dependent methyltra 99.5 1.7E-13 5.9E-18 132.4 11.4 126 156-291 48-188 (219)
36 1ve3_A Hypothetical protein PH 99.5 1.7E-13 6E-18 131.8 11.4 102 156-259 39-144 (227)
37 3ccf_A Cyclopropane-fatty-acyl 99.5 1.7E-13 5.9E-18 137.3 11.7 127 156-290 58-209 (279)
38 1kpg_A CFA synthase;, cyclopro 99.5 2.7E-13 9.2E-18 136.1 13.1 132 155-291 64-228 (287)
39 3pfg_A N-methyltransferase; N, 99.5 2.2E-13 7.4E-18 135.0 12.1 96 156-257 51-151 (263)
40 3ege_A Putative methyltransfer 99.5 2E-13 6.8E-18 135.7 11.9 142 133-291 20-178 (261)
41 3hem_A Cyclopropane-fatty-acyl 99.5 2.3E-13 7.8E-18 138.1 12.3 132 155-291 72-243 (302)
42 3jwh_A HEN1; methyltransferase 99.5 5E-13 1.7E-17 128.6 13.9 100 156-257 30-141 (217)
43 3bkw_A MLL3908 protein, S-aden 99.4 1.7E-13 5.9E-18 133.3 9.9 130 156-291 44-214 (243)
44 1pjz_A Thiopurine S-methyltran 99.4 4E-14 1.4E-18 136.1 5.4 134 156-291 23-176 (203)
45 2aot_A HMT, histamine N-methyl 99.4 7.2E-14 2.5E-18 141.4 7.4 132 155-287 52-217 (292)
46 3lcc_A Putative methyl chlorid 99.4 1.5E-13 5.1E-18 133.9 9.2 133 157-291 68-207 (235)
47 3cgg_A SAM-dependent methyltra 99.4 5.4E-13 1.9E-17 124.5 12.4 125 156-291 47-175 (195)
48 2kw5_A SLR1183 protein; struct 99.4 3E-13 1E-17 128.3 10.0 130 158-292 32-172 (202)
49 2xvm_A Tellurite resistance pr 99.4 1.7E-12 5.7E-17 122.2 14.8 133 156-292 33-174 (199)
50 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.5E-12 5.2E-17 125.4 14.6 127 156-291 42-182 (214)
51 3mti_A RRNA methylase; SAM-dep 99.4 4.7E-13 1.6E-17 125.4 10.6 104 156-259 23-137 (185)
52 2gs9_A Hypothetical protein TT 99.4 2E-13 7E-18 130.4 8.2 98 156-260 37-135 (211)
53 3lpm_A Putative methyltransfer 99.4 3.9E-13 1.3E-17 133.8 10.6 165 156-330 50-246 (259)
54 3orh_A Guanidinoacetate N-meth 99.4 1.3E-13 4.6E-18 135.7 6.9 144 133-287 47-206 (236)
55 3i9f_A Putative type 11 methyl 99.4 2.2E-13 7.4E-18 125.8 7.9 125 156-291 18-148 (170)
56 3ofk_A Nodulation protein S; N 99.4 3.2E-13 1.1E-17 129.6 9.1 101 155-259 51-156 (216)
57 1ri5_A MRNA capping enzyme; me 99.4 4.1E-13 1.4E-17 134.6 10.1 138 156-295 65-254 (298)
58 3ocj_A Putative exported prote 99.4 4.2E-13 1.4E-17 136.5 10.1 132 156-290 119-290 (305)
59 3e8s_A Putative SAM dependent 99.4 2.8E-13 9.4E-18 129.8 7.7 127 156-290 53-208 (227)
60 3g5t_A Trans-aconitate 3-methy 99.4 8.3E-13 2.8E-17 133.7 11.4 100 155-256 36-148 (299)
61 3d2l_A SAM-dependent methyltra 99.4 2.8E-12 9.7E-17 124.6 14.6 100 157-258 35-138 (243)
62 3bxo_A N,N-dimethyltransferase 99.4 7.6E-13 2.6E-17 128.3 10.0 97 156-258 41-142 (239)
63 2fk8_A Methoxy mycolic acid sy 99.4 4.5E-13 1.6E-17 136.7 8.2 101 155-260 90-197 (318)
64 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.8E-12 6E-17 125.6 12.0 124 157-290 40-178 (213)
65 2zfu_A Nucleomethylin, cerebra 99.4 8.7E-13 3E-17 126.6 9.6 110 156-289 68-177 (215)
66 3cc8_A Putative methyltransfer 99.4 1.3E-12 4.6E-17 125.3 10.8 130 155-292 32-186 (230)
67 3g07_A 7SK snRNA methylphospha 99.4 6.8E-13 2.3E-17 134.7 9.1 134 156-290 47-268 (292)
68 3grz_A L11 mtase, ribosomal pr 99.4 2.6E-12 8.9E-17 122.5 12.4 148 122-290 33-184 (205)
69 3e05_A Precorrin-6Y C5,15-meth 99.4 1.8E-11 6.2E-16 116.6 18.3 117 156-284 41-161 (204)
70 3thr_A Glycine N-methyltransfe 99.4 6.3E-13 2.2E-17 133.6 8.3 119 133-259 43-177 (293)
71 4e2x_A TCAB9; kijanose, tetron 99.4 6.2E-14 2.1E-18 148.8 1.0 130 155-290 107-252 (416)
72 1p91_A Ribosomal RNA large sub 99.4 8.8E-13 3E-17 131.1 9.2 92 156-260 86-181 (269)
73 3bkx_A SAM-dependent methyltra 99.4 6.8E-12 2.3E-16 124.7 14.9 102 156-259 44-161 (275)
74 2a14_A Indolethylamine N-methy 99.4 7.3E-13 2.5E-17 132.2 7.7 136 155-291 55-238 (263)
75 2p8j_A S-adenosylmethionine-de 99.4 1.2E-12 4.2E-17 124.5 8.7 101 156-258 24-129 (209)
76 2gb4_A Thiopurine S-methyltran 99.4 4.8E-13 1.7E-17 133.6 6.0 133 156-290 69-226 (252)
77 3dmg_A Probable ribosomal RNA 99.3 1.2E-12 4.3E-17 138.3 9.3 130 156-288 234-370 (381)
78 1dus_A MJ0882; hypothetical pr 99.3 1.5E-11 5.2E-16 114.5 15.2 133 118-260 22-160 (194)
79 2avn_A Ubiquinone/menaquinone 99.3 1.1E-12 3.7E-17 130.2 7.8 99 156-260 55-155 (260)
80 2pxx_A Uncharacterized protein 99.3 2.9E-12 9.8E-17 121.9 10.4 102 156-260 43-162 (215)
81 2vdw_A Vaccinia virus capping 99.3 8.3E-13 2.8E-17 135.3 7.0 102 156-259 49-171 (302)
82 3njr_A Precorrin-6Y methylase; 99.3 2E-11 7E-16 117.4 16.1 120 156-290 56-179 (204)
83 1zx0_A Guanidinoacetate N-meth 99.3 8.5E-13 2.9E-17 129.1 6.3 144 132-285 46-204 (236)
84 2yxd_A Probable cobalt-precorr 99.3 2.7E-11 9.2E-16 111.9 15.7 139 132-295 20-161 (183)
85 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.6E-11 5.6E-16 113.5 13.7 119 156-289 26-151 (178)
86 2g72_A Phenylethanolamine N-me 99.3 3.9E-12 1.3E-16 128.1 9.9 136 155-291 71-256 (289)
87 3evz_A Methyltransferase; NYSG 99.3 1.3E-11 4.6E-16 119.5 12.8 125 156-289 56-204 (230)
88 1xdz_A Methyltransferase GIDB; 99.3 7.9E-12 2.7E-16 122.8 11.2 124 156-290 71-201 (240)
89 3m70_A Tellurite resistance pr 99.3 4.9E-12 1.7E-16 126.9 9.9 99 156-257 121-223 (286)
90 1wzn_A SAM-dependent methyltra 99.3 7.3E-12 2.5E-16 122.9 10.9 102 156-259 42-147 (252)
91 3eey_A Putative rRNA methylase 99.3 6.6E-12 2.3E-16 118.7 10.1 133 156-289 23-171 (197)
92 3p9n_A Possible methyltransfer 99.3 6.4E-12 2.2E-16 118.5 9.9 135 118-260 14-156 (189)
93 3m33_A Uncharacterized protein 99.3 6.2E-12 2.1E-16 122.3 9.9 117 156-293 49-169 (226)
94 3mq2_A 16S rRNA methyltransfer 99.3 7.6E-12 2.6E-16 120.4 10.1 134 156-291 28-184 (218)
95 3q87_B N6 adenine specific DNA 99.3 9.9E-12 3.4E-16 116.0 10.3 115 157-291 25-149 (170)
96 1nt2_A Fibrillarin-like PRE-rR 99.3 1.2E-11 4.2E-16 119.8 10.9 130 155-291 57-195 (210)
97 3dxy_A TRNA (guanine-N(7)-)-me 99.3 5.8E-12 2E-16 122.9 8.0 122 156-286 35-172 (218)
98 3bgv_A MRNA CAP guanine-N7 met 99.3 7.4E-12 2.5E-16 127.7 8.8 104 156-260 35-158 (313)
99 2i62_A Nicotinamide N-methyltr 99.3 5.6E-12 1.9E-16 124.1 7.4 135 155-291 56-239 (265)
100 1l3i_A Precorrin-6Y methyltran 99.2 4.1E-11 1.4E-15 111.4 12.6 132 133-286 19-155 (192)
101 3g89_A Ribosomal RNA small sub 99.2 1.4E-11 4.9E-16 122.5 9.4 126 155-291 80-212 (249)
102 2pwy_A TRNA (adenine-N(1)-)-me 99.2 5.1E-11 1.8E-15 117.0 13.1 121 156-290 97-223 (258)
103 3ckk_A TRNA (guanine-N(7)-)-me 99.2 2.1E-11 7.3E-16 120.3 10.3 122 156-286 47-190 (235)
104 3i53_A O-methyltransferase; CO 99.2 9E-11 3.1E-15 120.7 15.4 131 155-290 169-320 (332)
105 4df3_A Fibrillarin-like rRNA/T 99.2 4E-11 1.4E-15 118.6 11.7 132 155-291 77-217 (233)
106 3gwz_A MMCR; methyltransferase 99.2 1.4E-10 4.9E-15 121.4 16.5 132 155-290 202-355 (369)
107 3p2e_A 16S rRNA methylase; met 99.2 1.8E-11 6E-16 120.0 8.8 135 156-291 25-185 (225)
108 3htx_A HEN1; HEN1, small RNA m 99.2 6.3E-11 2.1E-15 134.3 14.3 118 133-260 707-837 (950)
109 2ipx_A RRNA 2'-O-methyltransfe 99.2 2.5E-11 8.7E-16 118.3 9.8 130 156-290 78-216 (233)
110 3dp7_A SAM-dependent methyltra 99.2 3.7E-11 1.3E-15 125.6 11.2 131 155-289 179-340 (363)
111 2ozv_A Hypothetical protein AT 99.2 1.2E-11 4.2E-16 123.4 7.2 164 156-329 37-239 (260)
112 1yb2_A Hypothetical protein TA 99.2 2.9E-11 9.8E-16 121.4 9.6 120 155-290 110-236 (275)
113 2frn_A Hypothetical protein PH 99.2 9.6E-11 3.3E-15 118.2 13.4 154 116-288 96-254 (278)
114 3hp7_A Hemolysin, putative; st 99.2 2.6E-10 8.8E-15 116.3 16.6 124 155-287 85-228 (291)
115 3ggd_A SAM-dependent methyltra 99.2 1.2E-11 4.2E-16 120.9 6.5 100 156-259 57-165 (245)
116 2r3s_A Uncharacterized protein 99.2 1.1E-10 3.8E-15 119.5 13.9 131 156-290 166-322 (335)
117 2nxc_A L11 mtase, ribosomal pr 99.2 2.8E-11 9.6E-16 120.5 9.1 121 156-290 121-243 (254)
118 1fbn_A MJ fibrillarin homologu 99.2 7.2E-11 2.5E-15 115.1 11.8 126 155-290 74-212 (230)
119 3fpf_A Mtnas, putative unchara 99.2 5.9E-11 2E-15 121.2 11.3 100 154-259 121-224 (298)
120 1qzz_A RDMB, aclacinomycin-10- 99.2 8.3E-11 2.8E-15 122.6 12.5 131 155-290 182-338 (374)
121 1ej0_A FTSJ; methyltransferase 99.2 4.8E-11 1.6E-15 108.9 9.4 93 156-260 23-139 (180)
122 2ip2_A Probable phenazine-spec 99.2 3.4E-10 1.1E-14 116.3 16.7 130 157-290 169-321 (334)
123 4dcm_A Ribosomal RNA large sub 99.2 1.6E-11 5.6E-16 129.4 6.7 102 157-260 224-337 (375)
124 3lbf_A Protein-L-isoaspartate 99.2 5.1E-11 1.7E-15 113.7 9.5 98 155-259 77-176 (210)
125 1x19_A CRTF-related protein; m 99.2 1.6E-10 5.6E-15 120.2 13.7 132 155-290 190-347 (359)
126 3mcz_A O-methyltransferase; ad 99.2 1.5E-10 5.2E-15 119.7 12.9 130 156-288 180-336 (352)
127 3opn_A Putative hemolysin; str 99.2 7.5E-11 2.6E-15 116.3 10.0 121 155-289 37-182 (232)
128 2ld4_A Anamorsin; methyltransf 99.2 1.3E-10 4.4E-15 108.1 11.0 113 155-286 12-130 (176)
129 2b3t_A Protein methyltransfera 99.2 2.3E-10 7.8E-15 114.7 13.6 122 156-287 110-259 (276)
130 3id6_C Fibrillarin-like rRNA/T 99.2 1.4E-10 4.8E-15 114.6 11.8 129 155-291 76-216 (232)
131 3mb5_A SAM-dependent methyltra 99.2 1.2E-10 3.9E-15 114.8 11.1 119 156-289 94-220 (255)
132 2pjd_A Ribosomal RNA small sub 99.1 1.3E-11 4.6E-16 128.1 4.2 100 157-260 198-306 (343)
133 2fyt_A Protein arginine N-meth 99.1 1.2E-10 4.3E-15 120.9 10.9 97 156-254 65-168 (340)
134 3lst_A CALO1 methyltransferase 99.1 1.3E-10 4.5E-15 120.5 10.9 128 155-290 184-335 (348)
135 3q7e_A Protein arginine N-meth 99.1 9.3E-11 3.2E-15 122.2 9.7 98 156-255 67-171 (349)
136 1tw3_A COMT, carminomycin 4-O- 99.1 3.1E-10 1.1E-14 117.7 13.5 132 155-291 183-339 (360)
137 2qe6_A Uncharacterized protein 99.1 1.8E-10 6.2E-15 116.1 11.2 102 156-260 78-199 (274)
138 1i9g_A Hypothetical protein RV 99.1 2.3E-10 7.9E-15 114.2 11.7 118 156-287 100-226 (280)
139 1jsx_A Glucose-inhibited divis 99.1 1.5E-10 5E-15 110.1 9.7 116 156-289 66-186 (207)
140 2ift_A Putative methylase HI07 99.1 5.3E-11 1.8E-15 114.0 6.4 101 157-260 55-166 (201)
141 3uwp_A Histone-lysine N-methyl 99.1 9.4E-11 3.2E-15 124.5 8.6 123 127-259 153-290 (438)
142 2fhp_A Methylase, putative; al 99.1 9.5E-11 3.3E-15 109.1 7.6 132 118-260 15-157 (187)
143 4dzr_A Protein-(glutamine-N5) 99.1 1.5E-11 5E-16 116.7 2.0 137 133-288 15-189 (215)
144 3bzb_A Uncharacterized protein 99.1 6.7E-10 2.3E-14 112.1 13.9 131 156-290 80-236 (281)
145 3iv6_A Putative Zn-dependent a 99.1 1.6E-10 5.4E-15 116.2 8.9 96 156-259 46-150 (261)
146 1ws6_A Methyltransferase; stru 99.1 6.4E-11 2.2E-15 108.6 4.8 123 128-260 20-150 (171)
147 1af7_A Chemotaxis receptor met 99.1 2.1E-10 7.3E-15 116.0 9.0 101 156-257 106-252 (274)
148 3bwc_A Spermidine synthase; SA 99.1 2.3E-10 7.8E-15 117.1 9.1 129 155-288 95-237 (304)
149 1o54_A SAM-dependent O-methylt 99.1 6.1E-10 2.1E-14 111.6 11.7 119 156-290 113-238 (277)
150 3fzg_A 16S rRNA methylase; met 99.1 1.2E-10 4.1E-15 111.6 6.1 132 156-290 50-187 (200)
151 2fpo_A Methylase YHHF; structu 99.1 2.7E-10 9.1E-15 109.2 8.3 123 127-259 33-162 (202)
152 2vdv_E TRNA (guanine-N(7)-)-me 99.1 5.3E-10 1.8E-14 110.2 10.6 119 156-283 50-191 (246)
153 1g8a_A Fibrillarin-like PRE-rR 99.0 1E-09 3.5E-14 106.2 12.0 129 155-290 73-211 (227)
154 3r0q_C Probable protein argini 99.0 4.3E-10 1.5E-14 118.4 10.1 99 155-257 63-169 (376)
155 1vbf_A 231AA long hypothetical 99.0 2.7E-10 9.3E-15 110.3 7.8 95 156-259 71-167 (231)
156 3tma_A Methyltransferase; thum 99.0 1.3E-09 4.4E-14 113.4 13.3 121 156-289 204-337 (354)
157 2yvl_A TRMI protein, hypotheti 99.0 1.8E-09 6.2E-14 105.3 13.3 117 156-288 92-212 (248)
158 1dl5_A Protein-L-isoaspartate 99.0 5.8E-10 2E-14 114.4 10.1 96 156-259 76-177 (317)
159 2yxe_A Protein-L-isoaspartate 99.0 8.5E-10 2.9E-14 105.6 10.6 97 156-259 78-179 (215)
160 2esr_A Methyltransferase; stru 99.0 1.5E-10 5.1E-15 107.5 5.1 120 131-260 14-141 (177)
161 3reo_A (ISO)eugenol O-methyltr 99.0 1.1E-09 3.9E-14 114.7 12.2 126 155-291 203-355 (368)
162 3gdh_A Trimethylguanosine synt 99.0 1.5E-11 5.1E-16 120.2 -2.1 98 156-256 79-180 (241)
163 2plw_A Ribosomal RNA methyltra 99.0 9.7E-10 3.3E-14 103.9 10.4 92 156-259 23-156 (201)
164 1g6q_1 HnRNP arginine N-methyl 99.0 6.7E-10 2.3E-14 114.7 10.0 98 156-255 39-143 (328)
165 3tfw_A Putative O-methyltransf 99.0 3.3E-09 1.1E-13 104.9 14.5 99 156-259 64-172 (248)
166 1fp2_A Isoflavone O-methyltran 99.0 9E-10 3.1E-14 114.3 10.4 124 156-290 189-340 (352)
167 1u2z_A Histone-lysine N-methyl 99.0 1.1E-09 3.7E-14 117.5 11.0 103 155-259 242-361 (433)
168 1fp1_D Isoliquiritigenin 2'-O- 99.0 4.7E-10 1.6E-14 117.5 7.9 125 155-290 209-359 (372)
169 3adn_A Spermidine synthase; am 99.0 1.1E-09 3.6E-14 111.9 10.2 106 155-261 83-202 (294)
170 1jg1_A PIMT;, protein-L-isoasp 99.0 1.2E-09 4.2E-14 106.6 9.8 97 156-260 92-192 (235)
171 3u81_A Catechol O-methyltransf 99.0 6.4E-10 2.2E-14 107.6 7.5 101 156-259 59-172 (221)
172 2y1w_A Histone-arginine methyl 99.0 1.3E-09 4.3E-14 113.5 10.0 99 156-257 51-155 (348)
173 1ixk_A Methyltransferase; open 99.0 1.4E-09 4.9E-14 111.7 10.2 126 156-286 119-270 (315)
174 2igt_A SAM dependent methyltra 99.0 2.5E-09 8.4E-14 111.0 11.9 129 156-286 154-299 (332)
175 3p9c_A Caffeic acid O-methyltr 99.0 2E-09 6.8E-14 112.7 11.0 126 155-291 201-353 (364)
176 3sso_A Methyltransferase; macr 99.0 3.5E-10 1.2E-14 119.7 5.3 92 156-258 217-325 (419)
177 4a6d_A Hydroxyindole O-methylt 99.0 4.6E-09 1.6E-13 109.5 13.6 132 155-290 179-333 (353)
178 3ntv_A MW1564 protein; rossman 98.9 7.7E-10 2.6E-14 108.2 7.0 97 156-257 72-176 (232)
179 1xj5_A Spermidine synthase 1; 98.9 1.9E-09 6.5E-14 112.0 9.8 107 155-261 120-239 (334)
180 3tm4_A TRNA (guanine N2-)-meth 98.9 7.9E-09 2.7E-13 108.6 14.6 121 156-290 218-351 (373)
181 3a27_A TYW2, uncharacterized p 98.9 4.6E-09 1.6E-13 105.6 12.3 98 156-259 120-221 (272)
182 1i1n_A Protein-L-isoaspartate 98.9 1.2E-09 4E-14 105.6 7.4 97 156-259 78-184 (226)
183 3dr5_A Putative O-methyltransf 98.9 1.2E-09 4.1E-14 106.6 7.5 96 157-257 58-163 (221)
184 1o9g_A RRNA methyltransferase; 98.9 1.1E-09 3.6E-14 108.0 6.7 102 156-258 52-215 (250)
185 2pbf_A Protein-L-isoaspartate 98.9 6.7E-10 2.3E-14 107.4 5.1 97 156-259 81-195 (227)
186 2nyu_A Putative ribosomal RNA 98.9 3.9E-09 1.3E-13 99.2 10.0 93 156-259 23-147 (196)
187 2b25_A Hypothetical protein; s 98.9 5.6E-09 1.9E-13 107.6 12.0 98 156-259 106-221 (336)
188 3lec_A NADB-rossmann superfami 98.9 6.5E-09 2.2E-13 102.5 11.8 119 157-289 23-147 (230)
189 2bm8_A Cephalosporin hydroxyla 98.9 1.2E-09 4.2E-14 107.6 6.5 117 157-286 83-214 (236)
190 1r18_A Protein-L-isoaspartate( 98.9 1.8E-09 6.1E-14 104.7 7.4 96 156-259 85-196 (227)
191 3giw_A Protein of unknown func 98.9 7.7E-10 2.6E-14 111.8 4.7 104 155-259 78-202 (277)
192 3gnl_A Uncharacterized protein 98.9 7.4E-09 2.5E-13 102.9 11.6 119 157-289 23-147 (244)
193 3duw_A OMT, O-methyltransferas 98.9 2.2E-09 7.5E-14 103.4 7.6 99 156-259 59-169 (223)
194 3dou_A Ribosomal RNA large sub 98.9 3.7E-09 1.3E-13 100.8 9.1 111 156-287 26-160 (191)
195 2qm3_A Predicted methyltransfe 98.9 1.7E-08 5.8E-13 106.0 14.9 128 156-291 173-309 (373)
196 3c3p_A Methyltransferase; NP_9 98.9 1.4E-09 4.7E-14 104.1 6.0 96 157-258 58-161 (210)
197 2oxt_A Nucleoside-2'-O-methylt 98.9 3.9E-09 1.3E-13 106.1 9.6 98 156-258 75-186 (265)
198 2wa2_A Non-structural protein 98.9 2.2E-09 7.7E-14 108.6 7.8 99 156-259 83-195 (276)
199 1zg3_A Isoflavanone 4'-O-methy 98.9 3.8E-09 1.3E-13 109.8 9.5 124 156-290 194-346 (358)
200 4azs_A Methyltransferase WBDD; 98.9 5.2E-10 1.8E-14 124.0 2.8 100 155-256 66-172 (569)
201 2h00_A Methyltransferase 10 do 98.9 3.2E-10 1.1E-14 111.8 0.8 98 156-255 66-190 (254)
202 1wy7_A Hypothetical protein PH 98.8 3E-08 1E-12 94.2 14.1 121 156-291 50-175 (207)
203 1ne2_A Hypothetical protein TA 98.8 9.7E-09 3.3E-13 97.3 10.5 110 156-287 52-166 (200)
204 3tr6_A O-methyltransferase; ce 98.8 2.6E-09 8.8E-14 102.9 6.6 98 157-259 66-176 (225)
205 3kr9_A SAM-dependent methyltra 98.8 2.2E-08 7.6E-13 98.4 13.1 118 157-289 17-141 (225)
206 1inl_A Spermidine synthase; be 98.8 4.9E-09 1.7E-13 106.8 8.4 104 156-260 91-208 (296)
207 2yxl_A PH0851 protein, 450AA l 98.8 1.2E-08 4E-13 110.0 11.3 125 156-286 260-414 (450)
208 1iy9_A Spermidine synthase; ro 98.8 5.4E-09 1.8E-13 105.4 8.0 125 156-286 76-213 (275)
209 2b2c_A Spermidine synthase; be 98.8 3E-09 1E-13 109.6 6.0 105 156-261 109-226 (314)
210 2gpy_A O-methyltransferase; st 98.8 3.6E-09 1.2E-13 102.9 6.3 98 156-258 55-161 (233)
211 3r3h_A O-methyltransferase, SA 98.8 9.8E-10 3.4E-14 108.6 2.3 98 156-258 61-171 (242)
212 3b3j_A Histone-arginine methyl 98.8 7E-09 2.4E-13 112.8 8.7 97 156-256 159-262 (480)
213 2o07_A Spermidine synthase; st 98.8 5.6E-09 1.9E-13 107.0 7.1 106 155-261 95-213 (304)
214 1uir_A Polyamine aminopropyltr 98.8 4E-09 1.4E-13 108.4 5.9 122 156-281 78-216 (314)
215 2p41_A Type II methyltransfera 98.8 5.3E-09 1.8E-13 107.2 6.5 99 156-259 83-193 (305)
216 2b78_A Hypothetical protein SM 98.8 9.1E-09 3.1E-13 108.7 8.4 126 157-286 214-357 (385)
217 3ajd_A Putative methyltransfer 98.8 6.9E-09 2.4E-13 104.2 7.0 104 156-260 84-214 (274)
218 2pt6_A Spermidine synthase; tr 98.8 5E-09 1.7E-13 108.1 6.0 121 156-281 117-250 (321)
219 2i7c_A Spermidine synthase; tr 98.8 5E-09 1.7E-13 106.0 5.8 106 155-261 78-196 (283)
220 3k6r_A Putative transferase PH 98.8 3.7E-08 1.3E-12 99.7 12.2 166 115-299 95-265 (278)
221 2hnk_A SAM-dependent O-methylt 98.7 8.3E-09 2.8E-13 100.9 6.6 97 156-257 61-181 (239)
222 3cbg_A O-methyltransferase; cy 98.7 8.3E-09 2.8E-13 100.9 6.5 97 157-258 74-183 (232)
223 4hc4_A Protein arginine N-meth 98.7 1.5E-08 5.1E-13 106.9 8.8 97 156-255 84-187 (376)
224 1sui_A Caffeoyl-COA O-methyltr 98.7 5.9E-09 2E-13 103.3 5.1 97 156-257 80-190 (247)
225 1nv8_A HEMK protein; class I a 98.7 3.2E-08 1.1E-12 100.2 10.2 100 157-259 125-251 (284)
226 1mjf_A Spermidine synthase; sp 98.7 7.1E-09 2.4E-13 104.8 5.2 101 156-259 76-195 (281)
227 3gjy_A Spermidine synthase; AP 98.7 5E-09 1.7E-13 108.0 3.9 101 157-258 91-201 (317)
228 3lcv_B Sisomicin-gentamicin re 98.7 4.3E-08 1.5E-12 98.1 10.4 131 156-289 133-270 (281)
229 1wxx_A TT1595, hypothetical pr 98.7 1.4E-08 4.8E-13 106.9 7.1 125 156-283 210-348 (382)
230 1sqg_A SUN protein, FMU protei 98.7 5.3E-08 1.8E-12 104.1 10.9 125 156-286 247-399 (429)
231 4dmg_A Putative uncharacterize 98.7 4.4E-08 1.5E-12 103.9 10.1 126 156-285 215-351 (393)
232 2yx1_A Hypothetical protein MJ 98.7 1.1E-07 3.7E-12 98.5 12.8 94 156-259 196-293 (336)
233 2avd_A Catechol-O-methyltransf 98.7 1E-08 3.5E-13 99.0 4.5 98 156-258 70-180 (229)
234 2cmg_A Spermidine synthase; tr 98.7 2.1E-08 7.1E-13 100.6 6.5 96 155-259 72-173 (262)
235 3v97_A Ribosomal RNA large sub 98.7 6.8E-08 2.3E-12 109.7 11.5 122 156-286 540-677 (703)
236 1uwv_A 23S rRNA (uracil-5-)-me 98.7 3.4E-07 1.1E-11 98.1 16.2 119 156-289 287-412 (433)
237 3frh_A 16S rRNA methylase; met 98.6 6E-08 2E-12 96.1 9.3 131 155-289 105-240 (253)
238 3m6w_A RRNA methylase; rRNA me 98.6 2.4E-08 8.1E-13 108.0 6.7 126 156-287 102-255 (464)
239 2as0_A Hypothetical protein PH 98.6 2.5E-08 8.7E-13 105.3 6.4 126 156-285 218-360 (396)
240 3c0k_A UPF0064 protein YCCW; P 98.6 4.7E-08 1.6E-12 103.3 8.5 125 157-285 222-364 (396)
241 2f8l_A Hypothetical protein LM 98.6 6E-08 2.1E-12 100.4 9.1 122 155-283 130-278 (344)
242 2frx_A Hypothetical protein YE 98.6 6.5E-08 2.2E-12 105.1 9.6 122 156-282 118-266 (479)
243 1zq9_A Probable dimethyladenos 98.6 7.8E-08 2.7E-12 97.3 9.3 109 134-254 15-144 (285)
244 2ih2_A Modification methylase 98.6 1.1E-07 3.6E-12 100.4 10.4 129 134-284 26-187 (421)
245 3c3y_A Pfomt, O-methyltransfer 98.6 2.5E-08 8.6E-13 97.9 4.8 97 156-257 71-181 (237)
246 2xyq_A Putative 2'-O-methyl tr 98.6 5E-08 1.7E-12 99.4 5.9 111 156-289 64-195 (290)
247 3m4x_A NOL1/NOP2/SUN family pr 98.5 5.7E-08 2E-12 104.9 6.6 127 156-287 106-259 (456)
248 2h1r_A Dimethyladenosine trans 98.5 2.9E-07 9.9E-12 93.8 10.8 87 135-232 30-118 (299)
249 2jjq_A Uncharacterized RNA met 98.5 1E-06 3.5E-11 94.3 14.1 96 156-258 291-388 (425)
250 1yub_A Ermam, rRNA methyltrans 98.4 3.7E-09 1.3E-13 104.3 -7.4 100 156-258 30-146 (245)
251 2okc_A Type I restriction enzy 98.4 8.4E-07 2.9E-11 95.2 9.7 116 134-260 158-310 (445)
252 3b5i_A S-adenosyl-L-methionine 98.3 1.8E-06 6.3E-11 90.8 10.5 103 156-259 53-227 (374)
253 3gru_A Dimethyladenosine trans 98.3 1.4E-06 4.8E-11 88.9 8.7 84 134-227 37-122 (295)
254 1qam_A ERMC' methyltransferase 98.3 2.8E-07 9.5E-12 91.1 3.3 68 156-226 31-101 (244)
255 3bt7_A TRNA (uracil-5-)-methyl 98.2 4.1E-06 1.4E-10 87.7 11.1 116 157-289 215-349 (369)
256 3evf_A RNA-directed RNA polyme 98.2 6.7E-06 2.3E-10 82.6 11.4 101 156-259 75-186 (277)
257 3k0b_A Predicted N6-adenine-sp 98.1 8.3E-06 2.8E-10 86.4 10.9 102 156-259 202-352 (393)
258 3ldu_A Putative methylase; str 98.1 7.1E-06 2.4E-10 86.6 10.3 103 156-260 196-347 (385)
259 3e8s_A Putative SAM dependent 98.1 5.4E-06 1.8E-10 78.7 8.0 114 401-522 54-204 (227)
260 2efj_A 3,7-dimethylxanthine me 98.1 1.3E-05 4.6E-10 84.4 11.1 104 156-260 53-228 (384)
261 3ldg_A Putative uncharacterize 98.1 1.8E-05 6.3E-10 83.5 11.8 103 156-260 195-346 (384)
262 3tqs_A Ribosomal RNA small sub 98.0 1.1E-05 3.8E-10 80.5 9.2 82 134-226 16-103 (255)
263 2b9e_A NOL1/NOP2/SUN domain fa 98.0 1.2E-05 4.1E-10 82.4 9.7 102 156-259 103-236 (309)
264 2zfu_A Nucleomethylin, cerebra 98.0 3.6E-05 1.2E-09 73.1 11.6 150 371-546 27-191 (215)
265 2ar0_A M.ecoki, type I restric 98.0 5.9E-06 2E-10 91.1 6.5 116 135-260 157-315 (541)
266 2qfm_A Spermine synthase; sper 98.0 3.5E-06 1.2E-10 88.1 4.3 105 155-259 188-316 (364)
267 3fut_A Dimethyladenosine trans 98.0 1.2E-05 3.9E-10 81.1 7.8 81 134-226 34-117 (271)
268 4gqb_A Protein arginine N-meth 98.0 1E-05 3.6E-10 90.3 8.0 97 155-254 357-464 (637)
269 1xtp_A LMAJ004091AAA; SGPP, st 97.9 8E-06 2.7E-10 79.4 5.2 122 395-521 89-232 (254)
270 3pfg_A N-methyltransferase; N, 97.9 2.9E-05 9.8E-10 76.3 8.9 116 378-501 31-150 (263)
271 1kpg_A CFA synthase;, cyclopro 97.9 6.4E-06 2.2E-10 82.0 4.1 98 400-502 65-168 (287)
272 2dul_A N(2),N(2)-dimethylguano 97.9 5.7E-06 1.9E-10 87.2 3.6 96 157-257 49-164 (378)
273 3axs_A Probable N(2),N(2)-dime 97.8 8.8E-06 3E-10 86.2 4.7 95 157-257 54-158 (392)
274 1y8c_A S-adenosylmethionine-de 97.8 0.00011 3.7E-09 70.6 11.3 95 400-500 38-140 (246)
275 3jwg_A HEN1, methyltransferase 97.8 3.5E-05 1.2E-09 73.4 7.6 160 378-546 12-210 (219)
276 1m6e_X S-adenosyl-L-methionnin 97.8 1.4E-05 4.7E-10 83.7 4.7 104 155-259 51-211 (359)
277 3o4f_A Spermidine synthase; am 97.8 0.00011 3.6E-09 74.9 11.0 111 154-265 82-206 (294)
278 3dmg_A Probable ribosomal RNA 97.8 5.8E-05 2E-09 79.5 9.3 281 157-502 47-340 (381)
279 2xvm_A Tellurite resistance pr 97.8 8.6E-06 2.9E-10 75.9 2.7 112 401-521 34-167 (199)
280 3e23_A Uncharacterized protein 97.8 1.4E-05 4.6E-10 75.9 3.9 114 401-521 45-176 (211)
281 2qy6_A UPF0209 protein YFCK; s 97.7 2.3E-05 7.9E-10 78.3 5.7 124 155-290 60-234 (257)
282 4dcm_A Ribosomal RNA large sub 97.7 0.00025 8.4E-09 74.5 13.0 96 157-259 40-138 (375)
283 3ftd_A Dimethyladenosine trans 97.7 7.6E-05 2.6E-09 74.0 8.6 71 134-217 18-92 (249)
284 4auk_A Ribosomal RNA large sub 97.7 0.00034 1.2E-08 73.2 13.3 118 155-284 211-333 (375)
285 3ua3_A Protein arginine N-meth 97.7 2.8E-05 9.6E-10 87.2 5.5 97 156-254 410-531 (745)
286 3v97_A Ribosomal RNA large sub 97.7 0.00014 4.9E-09 82.4 11.4 103 156-259 191-349 (703)
287 4e2x_A TCAB9; kijanose, tetron 97.7 8.7E-06 3E-10 85.9 1.3 140 375-521 83-247 (416)
288 3dli_A Methyltransferase; PSI- 97.7 9.4E-06 3.2E-10 78.8 1.4 96 401-502 43-140 (240)
289 2r6z_A UPF0341 protein in RSP 97.7 1.7E-05 5.7E-10 79.3 2.9 72 156-227 84-169 (258)
290 2p7i_A Hypothetical protein; p 97.6 4.7E-05 1.6E-09 73.1 5.9 92 402-502 45-141 (250)
291 3uzu_A Ribosomal RNA small sub 97.6 5.3E-05 1.8E-09 76.5 6.4 72 134-217 29-106 (279)
292 2ex4_A Adrenal gland protein A 97.6 3.1E-05 1.1E-09 75.1 4.3 117 400-521 80-219 (241)
293 3cgg_A SAM-dependent methyltra 97.6 5.7E-05 2E-09 69.6 5.9 116 401-522 48-170 (195)
294 3hem_A Cyclopropane-fatty-acyl 97.6 2.1E-05 7.3E-10 79.1 3.0 97 399-502 72-183 (302)
295 3khk_A Type I restriction-modi 97.6 0.0001 3.5E-09 81.2 8.5 102 158-260 247-398 (544)
296 3dlc_A Putative S-adenosyl-L-m 97.6 6.1E-05 2.1E-09 70.9 5.9 95 402-502 46-148 (219)
297 3mgg_A Methyltransferase; NYSG 97.6 2.6E-05 8.9E-10 77.0 3.4 98 399-502 37-142 (276)
298 3h2b_A SAM-dependent methyltra 97.6 4.1E-05 1.4E-09 71.9 4.6 116 401-522 43-177 (203)
299 3ofk_A Nodulation protein S; N 97.6 3.6E-05 1.2E-09 73.1 4.2 103 395-502 47-154 (216)
300 3i9f_A Putative type 11 methyl 97.6 6.6E-05 2.3E-09 68.4 5.7 129 399-547 17-161 (170)
301 2fk8_A Methoxy mycolic acid sy 97.6 3.1E-05 1E-09 78.5 3.7 98 400-502 91-194 (318)
302 3hnr_A Probable methyltransfer 97.6 3.1E-05 1.1E-09 73.6 3.6 97 399-502 45-145 (220)
303 3lkd_A Type I restriction-modi 97.6 0.00017 5.8E-09 79.4 9.5 122 135-261 205-362 (542)
304 3hp7_A Hemolysin, putative; st 97.6 0.00016 5.4E-09 73.5 8.6 134 401-546 87-250 (291)
305 4hg2_A Methyltransferase type 97.5 3.2E-05 1.1E-09 77.1 3.3 93 401-501 41-134 (257)
306 3cc8_A Putative methyltransfer 97.5 3.6E-05 1.2E-09 73.1 3.3 97 399-502 32-130 (230)
307 3ujc_A Phosphoethanolamine N-m 97.5 4.3E-05 1.5E-09 74.5 3.9 100 398-502 54-159 (266)
308 1qyr_A KSGA, high level kasuga 97.5 4.1E-05 1.4E-09 76.1 3.8 81 135-226 9-97 (252)
309 3l8d_A Methyltransferase; stru 97.5 4.3E-05 1.5E-09 73.6 3.7 114 401-521 55-194 (242)
310 3thr_A Glycine N-methyltransfe 97.5 1.1E-05 3.9E-10 80.4 -0.5 100 399-502 57-175 (293)
311 3grz_A L11 mtase, ribosomal pr 97.5 9.8E-05 3.3E-09 69.6 6.0 112 401-521 62-179 (205)
312 3ou2_A SAM-dependent methyltra 97.5 4.5E-05 1.5E-09 72.0 3.6 96 401-503 48-147 (218)
313 3f4k_A Putative methyltransfer 97.5 3E-05 1E-09 75.5 2.4 112 401-521 48-190 (257)
314 2yqz_A Hypothetical protein TT 97.5 7.4E-05 2.5E-09 72.7 5.1 95 399-501 39-140 (263)
315 1nkv_A Hypothetical protein YJ 97.5 7E-05 2.4E-09 72.8 5.0 94 400-502 37-140 (256)
316 2o57_A Putative sarcosine dime 97.5 5.9E-05 2E-09 75.4 4.5 96 399-502 82-187 (297)
317 1dus_A MJ0882; hypothetical pr 97.5 7.2E-05 2.5E-09 68.9 4.7 115 399-521 52-177 (194)
318 3kkz_A Uncharacterized protein 97.5 4.9E-05 1.7E-09 74.9 3.7 114 400-521 47-190 (267)
319 3ll7_A Putative methyltransfer 97.5 6.4E-05 2.2E-09 79.9 4.6 104 156-259 94-211 (410)
320 1xxl_A YCGJ protein; structura 97.5 5.7E-05 1.9E-09 73.3 3.7 98 398-502 20-124 (239)
321 1vl5_A Unknown conserved prote 97.5 7E-05 2.4E-09 73.4 4.4 97 398-502 36-140 (260)
322 3bus_A REBM, methyltransferase 97.5 7.6E-05 2.6E-09 73.4 4.6 97 399-502 61-166 (273)
323 3lcc_A Putative methyl chlorid 97.4 0.00024 8.4E-09 68.3 8.0 114 401-521 68-201 (235)
324 1vlm_A SAM-dependent methyltra 97.4 0.00012 4.2E-09 69.9 5.8 110 400-521 48-182 (219)
325 3d2l_A SAM-dependent methyltra 97.4 0.00018 6.1E-09 69.1 6.9 93 401-500 35-135 (243)
326 3ocj_A Putative exported prote 97.4 0.0002 6.9E-09 72.2 7.4 135 401-546 120-304 (305)
327 3gcz_A Polyprotein; flavivirus 97.4 0.00014 4.8E-09 73.1 6.1 100 157-259 92-203 (282)
328 2gs9_A Hypothetical protein TT 97.4 0.00016 5.6E-09 68.2 6.1 95 399-502 36-132 (211)
329 3ege_A Putative methyltransfer 97.4 0.00013 4.3E-09 71.9 5.4 96 399-502 34-130 (261)
330 3dh0_A SAM dependent methyltra 97.4 7.4E-05 2.5E-09 70.9 3.6 133 400-546 38-193 (219)
331 3ccf_A Cyclopropane-fatty-acyl 97.4 0.0001 3.4E-09 73.2 4.7 112 399-519 57-176 (279)
332 1xdz_A Methyltransferase GIDB; 97.4 0.00043 1.5E-08 67.3 8.8 138 400-550 71-223 (240)
333 2avn_A Ubiquinone/menaquinone 97.4 0.00013 4.4E-09 71.7 5.1 98 399-502 54-152 (260)
334 3cvo_A Methyltransferase-like 97.4 0.00053 1.8E-08 66.0 9.3 90 157-255 32-152 (202)
335 1m6y_A S-adenosyl-methyltransf 97.4 6.1E-05 2.1E-09 76.9 2.8 70 156-226 27-105 (301)
336 3hm2_A Precorrin-6Y C5,15-meth 97.4 0.00032 1.1E-08 64.0 7.4 114 399-522 25-148 (178)
337 3opn_A Putative hemolysin; str 97.4 0.00038 1.3E-08 68.1 8.4 134 401-546 39-202 (232)
338 3mti_A RRNA methylase; SAM-dep 97.3 0.00023 7.8E-09 65.8 6.2 118 401-521 24-163 (185)
339 3s1s_A Restriction endonucleas 97.3 0.00025 8.5E-09 80.8 7.4 106 156-261 322-469 (878)
340 3eld_A Methyltransferase; flav 97.3 0.00067 2.3E-08 68.7 9.7 102 155-259 81-193 (300)
341 3g5t_A Trans-aconitate 3-methy 97.3 9.9E-05 3.4E-09 74.1 3.7 95 399-500 36-147 (299)
342 4htf_A S-adenosylmethionine-de 97.3 5.4E-05 1.8E-09 75.3 1.7 95 401-502 70-173 (285)
343 3g5l_A Putative S-adenosylmeth 97.3 0.00013 4.3E-09 71.1 4.3 100 395-501 40-144 (253)
344 2aot_A HMT, histamine N-methyl 97.3 6.4E-05 2.2E-09 75.4 2.3 97 401-501 54-171 (292)
345 3gu3_A Methyltransferase; alph 97.3 0.00014 4.8E-09 72.6 4.7 100 398-504 21-128 (284)
346 3bxo_A N,N-dimethyltransferase 97.3 0.0001 3.5E-09 70.6 3.1 117 378-502 21-141 (239)
347 3bkw_A MLL3908 protein, S-aden 97.3 0.00015 5E-09 69.7 4.2 97 399-502 43-144 (243)
348 2wk1_A NOVP; transferase, O-me 97.3 0.0012 4.1E-08 66.8 10.7 133 156-298 107-281 (282)
349 2yxd_A Probable cobalt-precorr 97.2 0.00013 4.3E-09 66.7 3.2 108 401-523 37-153 (183)
350 1jsx_A Glucose-inhibited divis 97.2 0.00013 4.5E-09 68.6 3.3 129 401-546 67-205 (207)
351 3eey_A Putative rRNA methylase 97.2 0.00018 6.1E-09 67.3 4.0 140 401-547 24-189 (197)
352 3e05_A Precorrin-6Y C5,15-meth 97.2 0.00024 8.3E-09 66.9 4.7 114 399-522 40-163 (204)
353 1ve3_A Hypothetical protein PH 97.2 0.00029 1E-08 66.9 5.3 98 400-503 39-143 (227)
354 3dtn_A Putative methyltransfer 97.2 0.00012 4.2E-09 70.2 2.7 97 400-502 45-148 (234)
355 4dzr_A Protein-(glutamine-N5) 97.2 0.0004 1.4E-08 65.0 6.2 158 375-546 12-205 (215)
356 2g72_A Phenylethanolamine N-me 97.2 0.00023 7.9E-09 71.0 4.6 62 460-521 173-250 (289)
357 3lpm_A Putative methyltransfer 97.2 0.00034 1.2E-08 68.9 5.7 120 401-522 51-196 (259)
358 2i62_A Nicotinamide N-methyltr 97.2 0.00012 3.9E-09 71.4 2.1 121 399-521 56-233 (265)
359 3g89_A Ribosomal RNA small sub 97.2 0.00047 1.6E-08 68.0 6.4 162 377-551 59-234 (249)
360 3jwh_A HEN1; methyltransferase 97.2 0.00025 8.5E-09 67.4 4.3 101 400-505 30-144 (217)
361 3evz_A Methyltransferase; NYSG 97.2 0.00041 1.4E-08 66.4 5.8 120 401-523 57-202 (230)
362 1l3i_A Precorrin-6Y methyltran 97.1 0.00024 8.2E-09 65.2 3.9 112 400-522 34-155 (192)
363 3ntv_A MW1564 protein; rossman 97.1 0.00026 8.9E-09 68.6 4.2 92 400-500 72-174 (232)
364 3sm3_A SAM-dependent methyltra 97.1 0.00016 5.4E-09 68.9 2.4 98 401-502 32-141 (235)
365 2b3t_A Protein methyltransfera 97.1 0.00066 2.2E-08 67.4 7.0 135 401-545 111-275 (276)
366 2p35_A Trans-aconitate 2-methy 97.1 0.00032 1.1E-08 68.1 4.4 115 399-521 33-155 (259)
367 4fsd_A Arsenic methyltransfera 97.1 0.00017 5.7E-09 75.6 2.4 114 401-521 85-245 (383)
368 3njr_A Precorrin-6Y methylase; 97.1 0.00034 1.2E-08 66.7 4.3 109 400-521 56-174 (204)
369 3m33_A Uncharacterized protein 97.1 0.00017 6E-09 69.3 2.2 107 401-520 50-160 (226)
370 2kw5_A SLR1183 protein; struct 97.1 0.00032 1.1E-08 65.7 3.9 111 402-521 32-165 (202)
371 2pxx_A Uncharacterized protein 97.0 7.7E-05 2.6E-09 70.1 -0.5 118 401-522 44-180 (215)
372 3m70_A Tellurite resistance pr 97.0 0.00024 8.1E-09 70.6 3.0 113 400-521 121-254 (286)
373 1ri5_A MRNA capping enzyme; me 97.0 0.00012 4.1E-09 72.6 0.8 100 401-502 66-174 (298)
374 2nxc_A L11 mtase, ribosomal pr 97.0 0.00065 2.2E-08 67.0 6.1 109 401-521 122-238 (254)
375 1ej0_A FTSJ; methyltransferase 97.0 0.0006 2.1E-08 61.3 5.2 134 401-546 24-178 (180)
376 2px2_A Genome polyprotein [con 97.0 0.0069 2.4E-07 60.2 12.9 92 156-257 74-183 (269)
377 3q87_B N6 adenine specific DNA 97.0 0.0012 4.2E-08 60.7 7.2 129 402-545 26-161 (170)
378 2y1w_A Histone-arginine methyl 97.0 0.00056 1.9E-08 70.8 5.3 111 386-501 37-154 (348)
379 2p8j_A S-adenosylmethionine-de 97.0 0.00019 6.4E-09 67.5 1.5 97 401-502 25-128 (209)
380 1g6q_1 HnRNP arginine N-methyl 97.0 0.00035 1.2E-08 71.7 3.6 95 401-499 40-142 (328)
381 3r0q_C Probable protein argini 97.0 0.00077 2.6E-08 70.5 6.2 115 383-501 47-168 (376)
382 2oyr_A UPF0341 protein YHIQ; a 96.9 0.00032 1.1E-08 70.0 2.9 93 157-251 90-194 (258)
383 3q7e_A Protein arginine N-meth 96.9 0.00054 1.9E-08 70.9 4.7 96 401-500 68-171 (349)
384 2frn_A Hypothetical protein PH 96.9 0.00048 1.6E-08 68.9 4.1 111 401-522 127-252 (278)
385 3vc1_A Geranyl diphosphate 2-C 96.9 0.0004 1.4E-08 70.2 3.6 97 398-502 116-221 (312)
386 3dp7_A SAM-dependent methyltra 96.9 0.00031 1.1E-08 72.9 2.7 101 398-502 178-287 (363)
387 1zx0_A Guanidinoacetate N-meth 96.9 0.00034 1.2E-08 67.6 2.8 99 401-503 62-171 (236)
388 3bgv_A MRNA CAP guanine-N7 met 96.9 0.00044 1.5E-08 69.8 3.4 103 399-503 34-156 (313)
389 2ip2_A Probable phenazine-spec 96.9 0.00081 2.8E-08 68.4 5.3 99 396-502 165-272 (334)
390 1wzn_A SAM-dependent methyltra 96.9 0.00079 2.7E-08 65.2 4.9 96 399-501 41-144 (252)
391 2plw_A Ribosomal RNA methyltra 96.8 0.00085 2.9E-08 62.7 4.7 83 460-545 105-195 (201)
392 3orh_A Guanidinoacetate N-meth 96.8 0.00051 1.7E-08 66.9 3.2 98 401-502 62-170 (236)
393 3i53_A O-methyltransferase; CO 96.8 0.0011 3.7E-08 67.6 5.3 121 394-521 164-315 (332)
394 3u81_A Catechol O-methyltransf 96.8 0.00028 9.7E-09 67.6 0.8 135 399-546 58-213 (221)
395 3lst_A CALO1 methyltransferase 96.7 0.00099 3.4E-08 68.6 4.8 101 394-502 179-286 (348)
396 3sso_A Methyltransferase; macr 96.7 0.00019 6.7E-09 76.0 -0.5 128 383-521 202-361 (419)
397 2k4m_A TR8_protein, UPF0146 pr 96.7 0.0013 4.4E-08 60.1 4.8 78 157-256 37-120 (153)
398 1qzz_A RDMB, aclacinomycin-10- 96.7 0.0009 3.1E-08 69.1 3.9 143 396-547 179-357 (374)
399 2fyt_A Protein arginine N-meth 96.7 0.0011 3.7E-08 68.4 4.5 111 385-499 50-168 (340)
400 3tfw_A Putative O-methyltransf 96.6 0.0022 7.6E-08 62.7 6.3 133 400-546 64-225 (248)
401 3g2m_A PCZA361.24; SAM-depende 96.6 0.0003 1E-08 70.6 -0.0 93 402-501 85-189 (299)
402 1yzh_A TRNA (guanine-N(7)-)-me 96.6 0.00097 3.3E-08 63.4 3.6 118 401-521 43-176 (214)
403 3tr6_A O-methyltransferase; ce 96.6 0.00062 2.1E-08 64.9 1.9 95 401-504 66-176 (225)
404 3ufb_A Type I restriction-modi 96.6 0.011 3.7E-07 64.8 11.9 118 134-260 204-365 (530)
405 2fca_A TRNA (guanine-N(7)-)-me 96.5 0.0017 5.7E-08 62.1 4.5 116 401-521 40-173 (213)
406 3duw_A OMT, O-methyltransferas 96.5 0.0015 5E-08 62.3 3.8 95 400-503 59-168 (223)
407 3iv6_A Putative Zn-dependent a 96.5 0.00076 2.6E-08 67.4 1.6 96 400-501 46-147 (261)
408 2bm8_A Cephalosporin hydroxyla 96.5 0.0043 1.5E-07 60.5 6.9 110 401-521 83-213 (236)
409 3ckk_A TRNA (guanine-N(7)-)-me 96.4 0.0028 9.5E-08 61.9 5.4 114 400-517 47-184 (235)
410 3ggd_A SAM-dependent methyltra 96.4 0.00056 1.9E-08 66.1 0.4 97 401-502 58-163 (245)
411 3c3p_A Methyltransferase; NP_9 96.4 0.0008 2.8E-08 63.7 1.5 92 401-502 58-160 (210)
412 3mcz_A O-methyltransferase; ad 96.4 0.00068 2.3E-08 69.6 1.0 104 395-502 174-287 (352)
413 3gwz_A MMCR; methyltransferase 96.4 0.0017 5.9E-08 67.4 4.1 139 394-545 197-368 (369)
414 2a14_A Indolethylamine N-methy 96.4 0.00099 3.4E-08 65.7 2.1 62 460-521 155-232 (263)
415 2p41_A Type II methyltransfera 96.4 0.00053 1.8E-08 70.0 0.0 99 401-501 84-190 (305)
416 2r3s_A Uncharacterized protein 96.4 0.0038 1.3E-07 63.2 6.4 99 398-502 164-271 (335)
417 3g07_A 7SK snRNA methylphospha 96.4 0.00052 1.8E-08 69.0 -0.2 44 458-501 174-219 (292)
418 2esr_A Methyltransferase; stru 96.4 0.00029 9.8E-09 64.7 -2.0 97 401-504 33-140 (177)
419 3p9n_A Possible methyltransfer 96.4 0.00055 1.9E-08 63.7 -0.2 98 401-503 46-154 (189)
420 1pjz_A Thiopurine S-methyltran 96.3 0.00075 2.6E-08 64.0 0.8 115 401-521 24-170 (203)
421 3r3h_A O-methyltransferase, SA 96.3 0.0031 1.1E-07 61.7 5.3 97 400-503 61-171 (242)
422 1vbf_A 231AA long hypothetical 96.2 0.00079 2.7E-08 64.4 0.3 90 400-503 71-166 (231)
423 3lkz_A Non-structural protein 96.2 0.061 2.1E-06 54.4 14.0 98 157-260 96-207 (321)
424 2vdw_A Vaccinia virus capping 96.2 0.0017 5.9E-08 65.9 2.8 99 401-502 50-169 (302)
425 4gek_A TRNA (CMO5U34)-methyltr 96.2 0.001 3.5E-08 66.1 1.1 98 402-503 73-179 (261)
426 2gb4_A Thiopurine S-methyltran 96.2 0.0019 6.3E-08 63.9 2.9 115 401-521 70-221 (252)
427 3bkx_A SAM-dependent methyltra 96.2 0.006 2.1E-07 59.7 6.6 99 400-502 44-159 (275)
428 2vdv_E TRNA (guanine-N(7)-)-me 96.2 0.0023 7.8E-08 62.4 3.5 114 401-518 51-190 (246)
429 4fzv_A Putative methyltransfer 96.2 0.006 2.1E-07 63.7 6.8 105 155-260 148-287 (359)
430 3dou_A Ribosomal RNA large sub 96.2 0.0045 1.5E-07 58.4 5.3 137 400-546 26-181 (191)
431 3c6k_A Spermine synthase; sper 96.2 0.0024 8.1E-08 67.1 3.6 98 155-257 205-331 (381)
432 3fpf_A Mtnas, putative unchara 96.2 0.0014 4.7E-08 66.8 1.5 94 400-503 123-223 (298)
433 1nt2_A Fibrillarin-like PRE-rR 96.1 0.0011 3.8E-08 63.5 0.8 93 401-501 59-160 (210)
434 3lbf_A Protein-L-isoaspartate 96.1 0.00092 3.1E-08 63.0 0.1 90 399-502 77-174 (210)
435 3p2e_A 16S rRNA methylase; met 96.1 0.0029 1E-07 61.3 3.7 98 401-500 26-137 (225)
436 2gpy_A O-methyltransferase; st 96.0 0.002 6.8E-08 62.0 1.9 93 401-502 56-160 (233)
437 3b3j_A Histone-arginine methyl 96.0 0.0025 8.6E-08 69.0 2.6 95 400-500 159-261 (480)
438 1ws6_A Methyltransferase; stru 96.0 0.00079 2.7E-08 60.8 -1.2 94 401-503 43-148 (171)
439 1tw3_A COMT, carminomycin 4-O- 95.9 0.0026 8.9E-08 65.3 2.3 102 396-504 180-290 (360)
440 1x19_A CRTF-related protein; m 95.9 0.0032 1.1E-07 64.9 2.9 101 395-502 186-295 (359)
441 2ozv_A Hypothetical protein AT 95.9 0.017 6E-07 56.8 8.0 120 399-521 36-188 (260)
442 3id6_C Fibrillarin-like rRNA/T 95.9 0.0035 1.2E-07 61.5 2.8 133 401-547 78-232 (232)
443 2ipx_A RRNA 2'-O-methyltransfe 95.8 0.003 1E-07 60.7 2.3 112 401-521 79-211 (233)
444 3adn_A Spermidine synthase; am 95.8 0.015 5.1E-07 58.8 7.2 145 398-547 82-246 (294)
445 3dr5_A Putative O-methyltransf 95.8 0.0028 9.6E-08 61.2 1.7 131 402-547 59-214 (221)
446 3gdh_A Trimethylguanosine synt 95.7 0.00063 2.1E-08 65.7 -3.0 93 401-502 80-181 (241)
447 3p8z_A Mtase, non-structural p 95.7 0.035 1.2E-06 54.6 9.3 99 157-260 80-189 (267)
448 2oxt_A Nucleoside-2'-O-methylt 95.7 0.0028 9.6E-08 63.3 1.6 111 401-514 76-201 (265)
449 2ift_A Putative methylase HI07 95.7 0.0026 9.1E-08 60.1 1.1 99 401-506 55-167 (201)
450 2hnk_A SAM-dependent O-methylt 95.7 0.0026 8.8E-08 61.6 1.0 92 401-502 62-181 (239)
451 3cbg_A O-methyltransferase; cy 95.6 0.0033 1.1E-07 60.8 1.6 94 401-502 74-182 (232)
452 3bwc_A Spermidine synthase; SA 95.6 0.0064 2.2E-07 61.6 3.7 143 399-546 95-258 (304)
453 1fp1_D Isoliquiritigenin 2'-O- 95.6 0.0031 1.1E-07 65.4 1.4 98 397-502 207-306 (372)
454 3dxy_A TRNA (guanine-N(7)-)-me 95.6 0.0048 1.6E-07 59.4 2.6 114 400-516 35-165 (218)
455 1i1n_A Protein-L-isoaspartate 95.6 0.0023 7.8E-08 61.1 0.2 89 401-502 79-182 (226)
456 2yvl_A TRMI protein, hypotheti 95.5 0.01 3.4E-07 57.1 4.6 104 401-517 93-206 (248)
457 3mb5_A SAM-dependent methyltra 95.5 0.012 4.1E-07 57.1 5.1 106 400-518 94-211 (255)
458 1mjf_A Spermidine synthase; sp 95.5 0.0084 2.9E-07 60.0 4.1 140 400-546 76-239 (281)
459 2nyu_A Putative ribosomal RNA 95.5 0.0053 1.8E-07 56.8 2.4 43 460-502 96-145 (196)
460 1p91_A Ribosomal RNA large sub 95.5 0.0043 1.5E-07 60.8 1.8 89 400-502 86-178 (269)
461 2vz8_A Fatty acid synthase; tr 95.4 0.004 1.4E-07 79.7 1.8 98 156-257 1241-1348(2512)
462 3reo_A (ISO)eugenol O-methyltr 95.4 0.009 3.1E-07 62.0 4.2 98 397-502 201-300 (368)
463 1nv8_A HEMK protein; class I a 95.4 0.0066 2.3E-07 61.0 2.9 130 401-546 125-282 (284)
464 2avd_A Catechol-O-methyltransf 95.3 0.0061 2.1E-07 58.1 2.3 94 400-502 70-179 (229)
465 2pjd_A Ribosomal RNA small sub 95.2 0.0046 1.6E-07 63.6 1.2 99 401-502 198-303 (343)
466 2wa2_A Non-structural protein 95.2 0.0081 2.8E-07 60.3 2.8 94 401-501 84-192 (276)
467 2fhp_A Methylase, putative; al 95.2 0.0033 1.1E-07 57.6 -0.0 96 401-503 46-155 (187)
468 3c3y_A Pfomt, O-methyltransfer 95.2 0.0042 1.4E-07 60.4 0.7 94 400-502 71-181 (237)
469 2igt_A SAM dependent methyltra 95.2 0.0083 2.8E-07 61.7 2.9 118 401-521 155-298 (332)
470 3mq2_A 16S rRNA methyltransfer 95.2 0.0064 2.2E-07 57.5 1.9 116 401-521 29-178 (218)
471 2pwy_A TRNA (adenine-N(1)-)-me 95.2 0.01 3.4E-07 57.4 3.4 108 400-520 97-217 (258)
472 1inl_A Spermidine synthase; be 95.2 0.016 5.6E-07 58.4 5.0 143 400-547 91-253 (296)
473 1g8a_A Fibrillarin-like PRE-rR 95.2 0.003 1E-07 60.3 -0.4 92 401-501 75-177 (227)
474 1ixk_A Methyltransferase; open 95.1 0.0073 2.5E-07 61.5 2.2 117 401-520 120-268 (315)
475 1iy9_A Spermidine synthase; ro 95.1 0.024 8.1E-07 56.6 5.9 144 399-547 75-237 (275)
476 2zig_A TTHA0409, putative modi 95.0 0.024 8E-07 57.2 5.7 94 202-299 21-140 (297)
477 1sui_A Caffeoyl-COA O-methyltr 95.0 0.01 3.5E-07 58.1 2.9 94 400-502 80-190 (247)
478 2yxe_A Protein-L-isoaspartate 95.0 0.0041 1.4E-07 58.6 0.1 90 401-503 79-178 (215)
479 1yb2_A Hypothetical protein TA 95.0 0.017 5.9E-07 57.1 4.5 109 399-520 110-230 (275)
480 3a27_A TYW2, uncharacterized p 95.0 0.0081 2.8E-07 59.8 2.0 110 401-521 121-245 (272)
481 3p9c_A Caffeic acid O-methyltr 94.9 0.019 6.6E-07 59.5 4.7 99 397-503 199-299 (364)
482 3htx_A HEN1; HEN1, small RNA m 94.8 0.025 8.4E-07 64.9 5.6 99 400-501 722-833 (950)
483 1fbn_A MJ fibrillarin homologu 94.8 0.017 5.7E-07 55.5 3.6 133 401-546 76-228 (230)
484 1r18_A Protein-L-isoaspartate( 94.7 0.0087 3E-07 57.2 1.4 91 401-502 86-194 (227)
485 2ld4_A Anamorsin; methyltransf 94.7 0.017 5.8E-07 52.7 3.2 58 459-519 61-128 (176)
486 2pbf_A Protein-L-isoaspartate 94.7 0.0059 2E-07 58.1 0.1 90 401-502 82-193 (227)
487 1fp2_A Isoflavone O-methyltran 94.6 0.0058 2E-07 62.8 -0.0 94 398-502 187-288 (352)
488 2pt6_A Spermidine synthase; tr 94.6 0.018 6.3E-07 58.8 3.7 143 400-547 117-278 (321)
489 2fpo_A Methylase YHHF; structu 94.5 0.012 4.1E-07 55.6 1.9 97 401-504 56-162 (202)
490 1o54_A SAM-dependent O-methylt 94.4 0.032 1.1E-06 55.0 4.8 107 401-520 114-232 (277)
491 1uir_A Polyamine aminopropyltr 94.4 0.013 4.4E-07 59.7 1.8 143 399-547 77-243 (314)
492 2zig_A TTHA0409, putative modi 94.3 0.073 2.5E-06 53.5 7.3 42 156-197 236-279 (297)
493 1i9g_A Hypothetical protein RV 94.3 0.042 1.4E-06 53.9 5.2 108 401-520 101-223 (280)
494 3bzb_A Uncharacterized protein 94.2 0.011 3.9E-07 58.8 1.1 94 401-500 81-203 (281)
495 2cmg_A Spermidine synthase; tr 94.2 0.049 1.7E-06 54.0 5.7 130 399-547 72-217 (262)
496 1jg1_A PIMT;, protein-L-isoasp 94.2 0.0086 3E-07 57.6 0.1 90 400-502 92-189 (235)
497 1wg8_A Predicted S-adenosylmet 94.2 0.035 1.2E-06 55.9 4.6 36 156-191 23-60 (285)
498 1o9g_A RRNA methyltransferase; 94.1 0.015 5E-07 56.6 1.6 45 460-504 167-216 (250)
499 1dl5_A Protein-L-isoaspartate 94.1 0.007 2.4E-07 61.4 -0.7 92 401-503 77-176 (317)
500 4df3_A Fibrillarin-like rRNA/T 94.1 0.034 1.2E-06 54.5 4.2 99 395-501 75-181 (233)
No 1
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.61 E-value=7.5e-15 Score=145.35 Aligned_cols=134 Identities=13% Similarity=0.201 Sum_probs=102.6
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
+..+|||||||+|.++..|++. .++++|+++.++..+.... .+.+ .++.+.++|+..+|+++++||+|+|.. +++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~-~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFI-EGNGHQQVEYVQGDAEQMPFTDERFHIVTCRI-AAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCC-CCCSCTTCEEEEEEES-CGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH-HhcCCCceEEEEecHHhCCCCCCCEEEEEEhh-hhH
Confidence 3468999999999999999874 6889999888886665333 3334 468999999999999999999999887 688
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHH-----------------HHHHHHHHHHhcCcEEEEEeec
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR-----------------IWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~-----------------~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
|.+++..++.++.|+|||||+|+++.+.... ...... ...++.+++++.||+++.....
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVDNSAPE-NDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEEEBCS-SHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEEcCCCC-CHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 9999999999999999999999997543211 111100 1136778899999988765544
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=4.7e-16 Score=156.06 Aligned_cols=96 Identities=24% Similarity=0.361 Sum_probs=80.6
Q ss_pred CEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 234 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~ 234 (555)
.+|||||||+|.++..|++. +|+|+|+++.++ +.|+ +..++.+.+++++.+|+++++||+|+|+. ++||.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml-----~~a~-~~~~v~~~~~~~e~~~~~~~sfD~v~~~~-~~h~~- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAVDPGEAQI-----RQAL-RHPRVTYAVAPAEDTGLPPASVDVAIAAQ-AMHWF- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHH-----HTCC-CCTTEEEEECCTTCCCCCSSCEEEEEECS-CCTTC-
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhh-----hhhh-hcCCceeehhhhhhhcccCCcccEEEEee-ehhHh-
Confidence 58999999999999999975 677777776555 4443 34679999999999999999999999988 57887
Q ss_pred chHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 235 RDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 235 d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
++..++.|+.|+|||||.|++.....
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 46789999999999999999877543
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.59 E-value=1.1e-14 Score=144.96 Aligned_cols=150 Identities=20% Similarity=0.300 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHHHHHHHHHcCC--CeEEE
Q 008748 132 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGI--PSTLG 206 (555)
Q Consensus 132 a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a~i~~A~~rg~--~v~~~ 206 (555)
.....+.+.+.+.. .+..+|||||||+|.++..+++ ..++++|+++.++..+..+. ...+. ++.+.
T Consensus 46 ~~~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~ 116 (273)
T 3bus_A 46 TDRLTDEMIALLDV--------RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARA-TAAGLANRVTFS 116 (273)
T ss_dssp HHHHHHHHHHHSCC--------CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEE
T ss_pred HHHHHHHHHHhcCC--------CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH-HhcCCCcceEEE
Confidence 34445555555542 2346999999999999999885 36888888888776655333 33343 58999
Q ss_pred EeCCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhh----HH-H-----------
Q 008748 207 VLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN----RR-I----------- 270 (555)
Q Consensus 207 ~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~----~~-~----------- 270 (555)
.+|+..+|+++++||+|++.. +++|.+++..+++++.++|||||+++++++......... .. .
T Consensus 117 ~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (273)
T 3bus_A 117 YADAMDLPFEDASFDAVWALE-SLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGG 195 (273)
T ss_dssp ECCTTSCCSCTTCEEEEEEES-CTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCC
T ss_pred ECccccCCCCCCCccEEEEec-hhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCC
Confidence 999999999989999999887 688899999999999999999999999875432111111 01 1
Q ss_pred HHHHHHHHHhcCcEEEEEeec
Q 008748 271 WNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 271 ~~~l~~l~~~~gw~vv~~~~~ 291 (555)
-.++.+++++.||+++..+..
T Consensus 196 ~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 196 IDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEEEC
Confidence 146788899999998866553
No 4
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.58 E-value=1.2e-15 Score=149.80 Aligned_cols=134 Identities=15% Similarity=0.176 Sum_probs=98.4
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
+..+|||||||+|.++..|++. .++++|+++.++..+..+.. . ...+.+..+|+..+++++++||+|+|.. +++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELA-G-MPVGKFILASMETATLPPNTYDLIVIQW-TAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTT-T-SSEEEEEESCGGGCCCCSSCEEEEEEES-CGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhc-c-CCceEEEEccHHHCCCCCCCeEEEEEcc-hhh
Confidence 3469999999999999988764 47888887776644442221 1 1468889999989999889999999988 588
Q ss_pred cc--cchHHHHHHHHhhcCCCcEEEEEcCCCCCC-------ChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 232 WL--QRDGILLLELDRLLRPGGYFVYSSPEAYAH-------DPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 232 ~~--~d~~~~L~el~RvLkPGG~lvis~P~~~~~-------~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
|. .+...++.++.++|||||+++++++..... .......-.++.+++++.||+++.....
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 88 456789999999999999999987521100 0000012357888999999998876544
No 5
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.57 E-value=1.4e-14 Score=139.29 Aligned_cols=133 Identities=16% Similarity=0.222 Sum_probs=100.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||||||+|.++..|++. .++++|+++.++ +.++++.. ++.+..+|+..++++ ++||+|+|.. ++++
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l~~ 118 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMR-----MIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTY-AFHH 118 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHH-----HHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEES-CGGG
T ss_pred CCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHH-----HHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECc-chhc
Confidence 458999999999999999875 567777766555 44444433 788999999999988 8999999887 6889
Q ss_pred ccchHH--HHHHHHhhcCCCcEEEEEcCCCCCCChh-----------------hHH-----HHHHHHHHHHhcCcEEEEE
Q 008748 233 LQRDGI--LLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------NRR-----IWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 233 ~~d~~~--~L~el~RvLkPGG~lvis~P~~~~~~~e-----------------~~~-----~~~~l~~l~~~~gw~vv~~ 288 (555)
.+++.. +++++.++|||||.++++++........ ... .-+++.+++++.||+++..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 888876 9999999999999999997653211000 000 1157889999999998877
Q ss_pred eeceEEe
Q 008748 289 KDQTVIW 295 (555)
Q Consensus 289 ~~~~~iw 295 (555)
......|
T Consensus 199 ~~~~~~w 205 (220)
T 3hnr_A 199 RLNHFVW 205 (220)
T ss_dssp ECSSSEE
T ss_pred eccceEE
Confidence 6654433
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.57 E-value=1e-14 Score=139.13 Aligned_cols=151 Identities=11% Similarity=0.085 Sum_probs=110.8
Q ss_pred CCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CC
Q 008748 128 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IP 202 (555)
Q Consensus 128 f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~ 202 (555)
|........+.+.+.+.. +..+|||||||+|.++..|++. .++++|+++.++..+..+.. ..+ .+
T Consensus 25 ~~~~~~~~~~~~~~~~~~---------~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~-~~~~~~~ 94 (219)
T 3dlc_A 25 FAPIYPIIAENIINRFGI---------TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIA-DANLNDR 94 (219)
T ss_dssp TTTHHHHHHHHHHHHHCC---------CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHH-HTTCTTT
T ss_pred hccccHHHHHHHHHhcCC---------CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHH-hccccCc
Confidence 334444555555555542 1238999999999999999864 78899998888766664433 333 36
Q ss_pred eEEEEeCCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChh----------------
Q 008748 203 STLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE---------------- 266 (555)
Q Consensus 203 v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e---------------- 266 (555)
+.+.++|+..+++++++||+|++.. +++|..++..+++++.++|||||.++++.+........
T Consensus 95 ~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (219)
T 3dlc_A 95 IQIVQGDVHNIPIEDNYADLIVSRG-SVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEF 173 (219)
T ss_dssp EEEEECBTTBCSSCTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHH
T ss_pred eEEEEcCHHHCCCCcccccEEEECc-hHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhh
Confidence 8999999999999999999999888 68888999999999999999999999986542110000
Q ss_pred -----hHHHHHHHHHHHHhcCcEEEEEe
Q 008748 267 -----NRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 267 -----~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
....-+++.+++++.||+.+...
T Consensus 174 ~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 174 NRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp HHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 00112578899999999876554
No 7
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.57 E-value=1.1e-14 Score=143.23 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=109.1
Q ss_pred CccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--Ce
Q 008748 129 HDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PS 203 (555)
Q Consensus 129 ~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v 203 (555)
........+.+.+.+.. .+..+|||||||+|.++..|++. .++++|+++.++..+..+ +...+. ++
T Consensus 18 ~~~~~~~~~~l~~~~~~--------~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~~v 88 (256)
T 1nkv_A 18 NPFTEEKYATLGRVLRM--------KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRR-AEELGVSERV 88 (256)
T ss_dssp SSCCHHHHHHHHHHTCC--------CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHH-HHHTTCTTTE
T ss_pred CCCCHHHHHHHHHhcCC--------CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH-HHhcCCCcce
Confidence 33445556666666543 23468999999999999988863 688999999888766643 334443 58
Q ss_pred EEEEeCCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCC--ChhhHH-----------H
Q 008748 204 TLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH--DPENRR-----------I 270 (555)
Q Consensus 204 ~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~--~~e~~~-----------~ 270 (555)
.+.++|+..+++ +++||+|+|.. ++++..++..+++++.|+|||||+++++.+..... ...... .
T Consensus 89 ~~~~~d~~~~~~-~~~fD~V~~~~-~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
T 1nkv_A 89 HFIHNDAAGYVA-NEKCDVAACVG-ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLT 166 (256)
T ss_dssp EEEESCCTTCCC-SSCEEEEEEES-CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCC
T ss_pred EEEECChHhCCc-CCCCCEEEECC-ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCC
Confidence 999999999988 78999999877 58888889999999999999999999987542111 111111 1
Q ss_pred HHHHHHHHHhcCcEEEE
Q 008748 271 WNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 271 ~~~l~~l~~~~gw~vv~ 287 (555)
..++.+++++.||+++.
T Consensus 167 ~~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVE 183 (256)
T ss_dssp HHHHHHHHHTTTBCCCE
T ss_pred HHHHHHHHHHCCCeeEE
Confidence 24778889999997664
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.57 E-value=3.3e-14 Score=141.41 Aligned_cols=133 Identities=17% Similarity=0.221 Sum_probs=104.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
++.+|||||||+|.++..+++. .|+++|+++.++..+..+. ...+. ++.+.++|+..+++++++||+|+|.. +
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~-~ 123 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNA-RQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG-A 123 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS-C
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHH-HHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC-C
Confidence 3469999999999999999874 6889999988876666433 33343 48999999999999889999999888 5
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCC--CChhhHHHH----------HHHHHHHHhcCcEEEEEee
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDPENRRIW----------NAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~--~~~e~~~~~----------~~l~~l~~~~gw~vv~~~~ 290 (555)
+++. ++..+++++.++|||||+++++++.... ........| .++.+++++.||+++....
T Consensus 124 ~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 124 IYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp GGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred ceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 7777 7888999999999999999998764211 222333344 3788899999999885543
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.57 E-value=3.4e-14 Score=139.78 Aligned_cols=130 Identities=15% Similarity=0.250 Sum_probs=102.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||||||+|.++..+++. .|+++|+++.++..+..+. ...+. ++.+.++|+..+|+++++||+|+|.. ++
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 124 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENA-VKANCADRVKGITGSMDNLPFQNEELDLIWSEG-AI 124 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES-CS
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH-HHcCCCCceEEEECChhhCCCCCCCEEEEEecC-hH
Confidence 458999999999999999864 7889999988886666433 34443 38999999999999999999999888 57
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCC--CChhhHHHH----------HHHHHHHHhcCcEEEEE
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDPENRRIW----------NAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~--~~~e~~~~~----------~~l~~l~~~~gw~vv~~ 288 (555)
++. +...+++++.++|||||+++++++.... ........| .++.+++++.||+++..
T Consensus 125 ~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 125 YNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 777 7888999999999999999998854221 122222333 36788999999998863
No 10
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=2.2e-14 Score=144.68 Aligned_cols=135 Identities=16% Similarity=0.183 Sum_probs=104.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..|++. .++++|+++.++..+..... ..+ .++.+.++|+..+|+++++||+|++.. +
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 159 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNN-QAGLADNITVKYGSFLEIPCEDNSYDFIWSQD-A 159 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH-HHTCTTTEEEEECCTTSCSSCTTCEEEEEEES-C
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-hcCCCcceEEEEcCcccCCCCCCCEeEEEecc-h
Confidence 3468999999999999998863 68899998888766654333 333 358999999999999999999999887 6
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCC--hhhHHH-----------HHHHHHHHHhcCcEEEEEeec
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD--PENRRI-----------WNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~--~e~~~~-----------~~~l~~l~~~~gw~vv~~~~~ 291 (555)
++|..++..+++++.|+|||||+++++++...... ...... -.++.+++++.||+++.....
T Consensus 160 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 160 FLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 88888899999999999999999999875432111 111111 236778899999998876554
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.56 E-value=3.8e-14 Score=138.96 Aligned_cols=135 Identities=15% Similarity=0.165 Sum_probs=103.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
+..+|||||||+|.++..+++. .++++|+++.++..+..........++.+.++|+..+++++++||+|+|.. +++|
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 99 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY-AAHH 99 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES-CGGG
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC-chhh
Confidence 3468999999999999999874 688999998888666644433333468999999999999999999999887 5888
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHH-----------------HHHHHHHHHHhcCcEEEEEeec
Q 008748 233 LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR-----------------IWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 233 ~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~-----------------~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
..++..++.++.|+|||||+++++.+..... ..... ...++.+++++.||+++.....
T Consensus 100 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 100 FSDVRKAVREVARVLKQDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 8899999999999999999999976543111 11100 1236778899999987765543
No 12
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.56 E-value=6.6e-15 Score=143.02 Aligned_cols=127 Identities=16% Similarity=0.174 Sum_probs=98.2
Q ss_pred CEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
.+|||||||+|.++..|++. .++++|+++.++ +.|+++.. ++.+.++|+..+ +++++||+|+|.. +++|.
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~-~l~~~ 116 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFNDITCVEASEEAI-----SHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTH-VLEHI 116 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHH-----HHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEES-CGGGC
T ss_pred CcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHH-----HHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhh-HHHhh
Confidence 57999999999999999875 677777766555 44444433 788999998877 4678999999888 69999
Q ss_pred cchHHHHHHHH-hhcCCCcEEEEEcCCCCCC-------------C----hhh-------HHHHHHHHHHHHhcCcEEEEE
Q 008748 234 QRDGILLLELD-RLLRPGGYFVYSSPEAYAH-------------D----PEN-------RRIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 234 ~d~~~~L~el~-RvLkPGG~lvis~P~~~~~-------------~----~e~-------~~~~~~l~~l~~~~gw~vv~~ 288 (555)
+++..+++++. |+|||||++++++|..... . ... .-.-.++.+++++.||+++..
T Consensus 117 ~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 117 DDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp SSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 99999999999 9999999999998764210 0 000 001247889999999999877
Q ss_pred ee
Q 008748 289 KD 290 (555)
Q Consensus 289 ~~ 290 (555)
..
T Consensus 197 ~~ 198 (250)
T 2p7i_A 197 SG 198 (250)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 13
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.55 E-value=3e-14 Score=136.90 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=104.9
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||+|||+|.++..+++ ..++++|+++.++..+..+.......++.+..+|...+++++++||+|+++. ++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 116 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF-TF 116 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES-CG
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh-hh
Confidence 46899999999999988875 2688999999888777655444333468999999999999989999999888 68
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCCC----ChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH----DPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~----~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
++..++..+++++.++|+|||.++++.+..... .........++.+++++.||+++....
T Consensus 117 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 117 HELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp GGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe
Confidence 888899999999999999999999987442111 001111235788999999999887654
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.55 E-value=2.7e-14 Score=140.60 Aligned_cols=131 Identities=22% Similarity=0.264 Sum_probs=100.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC---CCeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg---~~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
+..+|||||||+|.++..+++. .|+++|+++.++ +.|+++. .++.+.++|...+++++++||+|++..
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~- 128 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIV-----NMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD- 128 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHH-----HHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES-
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH-
Confidence 3469999999999999998864 577777766555 4555543 578999999999999999999999887
Q ss_pred ccccc--cchHHHHHHHHhhcCCCcEEEEEcCCCCC---CChhhHH----------HHHHHHHHHHhcCcEEEEEeec
Q 008748 229 RIDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRR----------IWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 229 ~l~~~--~d~~~~L~el~RvLkPGG~lvis~P~~~~---~~~e~~~----------~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
+++|. .+...+++++.|+|||||.++++++.... ....... ...++.+++++.||+++.....
T Consensus 129 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 129 AILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 68888 78888999999999999999998753211 1111111 1247888999999998876544
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.54 E-value=1.8e-14 Score=141.93 Aligned_cols=131 Identities=16% Similarity=0.242 Sum_probs=101.1
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHc--CCCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~r--g~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..+++. .++++|+++.++. .|+++ ..++.+..+|+..+++++++||+|+|.. +
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 117 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLT-----EAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSL-A 117 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHH-----HHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEES-C
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHH-----HHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEch-h
Confidence 4579999999999999999875 5677777766554 44443 4578999999999999889999999988 6
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCC---------CChhh----------------------------HHHHH
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA---------HDPEN----------------------------RRIWN 272 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~---------~~~e~----------------------------~~~~~ 272 (555)
+++.+++..+++++.++|||||.++++.+.... ..... .....
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 197 (253)
T 3g5l_A 118 LHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVT 197 (253)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHH
T ss_pred hhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHH
Confidence 889999999999999999999999998543210 00000 00235
Q ss_pred HHHHHHHhcCcEEEEEeec
Q 008748 273 AMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 273 ~l~~l~~~~gw~vv~~~~~ 291 (555)
++.++++++||+++.....
T Consensus 198 ~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 198 TYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHcCCeeeeeecC
Confidence 7889999999999876654
No 16
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=1.7e-14 Score=137.21 Aligned_cols=130 Identities=16% Similarity=0.104 Sum_probs=101.0
Q ss_pred CEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 234 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~ 234 (555)
.+|||||||+|.++..|++. .++++|+++.++ +.++++..++.+.++|+..+++++++||+|++.. +++|..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~ 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQIEGLEPATRLV-----ELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY-SLIHMG 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHH-----HHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES-SSTTCC
T ss_pred CeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHHhCCCCeEEeCcccccccCCCCeEEEEehh-hHhcCC
Confidence 57999999999999999875 567777665544 5566667789999999999998889999999988 577775
Q ss_pred --chHHHHHHHHhhcCCCcEEEEEcCCCCCCC-----h--hhHHHHHHHHHHHHhcCcEEEEEeece
Q 008748 235 --RDGILLLELDRLLRPGGYFVYSSPEAYAHD-----P--ENRRIWNAMYDLLKSMCWKIVSKKDQT 292 (555)
Q Consensus 235 --d~~~~L~el~RvLkPGG~lvis~P~~~~~~-----~--e~~~~~~~l~~l~~~~gw~vv~~~~~~ 292 (555)
+...+++++.++|||||+++++.+...... . .......++.+++++.||+++......
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 778899999999999999999875532100 0 000123578899999999999776553
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.53 E-value=4.5e-14 Score=140.79 Aligned_cols=136 Identities=18% Similarity=0.323 Sum_probs=105.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
+..+|||||||+|.++..+++. .++++|+++.++..+..+.......++.+...|+..+++++++||+|++.. ++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 115 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF-VL 115 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES-CG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec-hh
Confidence 3469999999999999998853 688999998887666644433323468999999999999999999999888 68
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCC-----CChhhHHHH-----------------HHHHHHHHhcCcEEEEE
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-----HDPENRRIW-----------------NAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~-----~~~e~~~~~-----------------~~l~~l~~~~gw~vv~~ 288 (555)
++.+++..++.++.++|||||++++..+.... ........| .++..++++.||+++..
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~ 195 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRV 195 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEE
Confidence 99999999999999999999999998754211 111111222 36778899999998876
Q ss_pred eec
Q 008748 289 KDQ 291 (555)
Q Consensus 289 ~~~ 291 (555)
+..
T Consensus 196 ~~~ 198 (276)
T 3mgg_A 196 EPR 198 (276)
T ss_dssp EEE
T ss_pred eeE
Confidence 654
No 18
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.53 E-value=5.3e-14 Score=135.77 Aligned_cols=134 Identities=19% Similarity=0.283 Sum_probs=100.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC------CeEEEEeCCCCCCCCCCCccEEEecc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI------PSTLGVLGTKRLPYPSRSFELAHCSR 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~------~v~~~~~d~~~Lp~~d~sFDlVv~s~ 227 (555)
..+|||+|||+|.++..+++. .++++|+++.++..++.. +...+. ++.+...|...+++++++||+|+++.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETA-ARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHH-HHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 458999999999999999875 677787777666444422 222232 46889999999999889999999887
Q ss_pred cccccccchH---HHHHHHHhhcCCCcEEEEEcCCCCCCChhhHH--------------------------------HHH
Q 008748 228 CRIDWLQRDG---ILLLELDRLLRPGGYFVYSSPEAYAHDPENRR--------------------------------IWN 272 (555)
Q Consensus 228 ~~l~~~~d~~---~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~--------------------------------~~~ 272 (555)
++++..++. .+++++.++|||||+++++++........... ..+
T Consensus 110 -~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (235)
T 3sm3_A 110 -FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEK 188 (235)
T ss_dssp -CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHH
T ss_pred -hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHH
Confidence 688888877 89999999999999999987543211111100 134
Q ss_pred HHHHHHHhcCcEEEEEeec
Q 008748 273 AMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 273 ~l~~l~~~~gw~vv~~~~~ 291 (555)
++.+++++.||+++.....
T Consensus 189 ~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 189 ELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHHHcCCEEEEEEec
Confidence 7889999999999877654
No 19
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.52 E-value=2.4e-14 Score=139.50 Aligned_cols=129 Identities=23% Similarity=0.286 Sum_probs=99.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHc--CCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~r--g~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..+++. .++++|+++.++ +.++++ ..++.+.++|+..+++++++||+|++.. +++
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 127 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMI-----QKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAIN-SLE 127 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHH-----HHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEES-CTT
T ss_pred CCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHH-----HHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcC-hHh
Confidence 358999999999999999975 566777666554 445444 4578999999999999899999999887 688
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhh--H-----------HHHHHHHHHHHhcCcEEEEEee
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN--R-----------RIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~--~-----------~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
|.+++..++.++.++|+|||+++++.+......... . ..-.++.+++++.||+++....
T Consensus 128 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 128 WTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp SSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 889999999999999999999999875431110000 0 0113788999999999986554
No 20
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.52 E-value=5.9e-14 Score=143.36 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=104.7
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..|++. .|+++|+++.++..+..+. ...+. ++.+..+|+..+|+++++||+|++.. +
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~ 194 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRA-RELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE-S 194 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES-C
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH-HHcCCCCceEEEECChhcCCCCCCCEeEEEECC-c
Confidence 3469999999999999998863 7889999988886666443 34443 58999999999999999999999887 5
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCC---ChhhHH-----------HHHHHHHHHHhcCcEEEEEeece
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH---DPENRR-----------IWNAMYDLLKSMCWKIVSKKDQT 292 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~---~~e~~~-----------~~~~l~~l~~~~gw~vv~~~~~~ 292 (555)
+++. +...++.++.|+|||||+++++++..... ...... ...++.+++++.||+++..+...
T Consensus 195 l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 195 TMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp GGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred hhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 7877 58889999999999999999987543221 111111 12478899999999998877654
No 21
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.52 E-value=2.6e-14 Score=139.90 Aligned_cols=125 Identities=17% Similarity=0.199 Sum_probs=94.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC--CCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L--p~~d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..+++. .++++|+++.++ +.++++ +.+..+|...+ ++++++||+|+|.. +++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~-~l~ 112 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMI-----KFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISH-FVE 112 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHH-----HHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEES-CGG
T ss_pred CCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHH-----HHHHhh---cceeeccHHHHhhhcCCCCeeEEEECC-chh
Confidence 468999999999999998874 567777665544 555544 77888887665 78889999999887 688
Q ss_pred cccch--HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHH-----------HHHHHHHHHHhcCcEEEEEee
Q 008748 232 WLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRR-----------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 232 ~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~-----------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
|..++ ..+++++.|+|||||+++++++..... ..... .-.++.+++++.||+++....
T Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 113 HLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL-YSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp GSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH-HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred hCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh-HHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 88855 889999999999999999988764211 00000 114788999999999876544
No 22
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.52 E-value=9.5e-14 Score=139.92 Aligned_cols=102 Identities=14% Similarity=0.218 Sum_probs=85.9
Q ss_pred CCCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
++.+|||||||+|.++..|++. .++++|+++.++..+..+ +...+.++.+.++|+..++++ ++||+|++.. +
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~-~ 98 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAREL-FRLLPYDSEFLEGDATEIELN-DKYDIAICHA-F 98 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHH-HHSSSSEEEEEESCTTTCCCS-SCEEEEEEES-C
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEEcchhhcCcC-CCeeEEEECC-h
Confidence 3469999999999999999863 578888888877665533 333445789999999999885 6899999888 6
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+++.+++..+++++.++|||||++++..|.
T Consensus 99 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 889999999999999999999999999887
No 23
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.52 E-value=1.8e-14 Score=141.19 Aligned_cols=137 Identities=16% Similarity=0.181 Sum_probs=101.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
+..+|||||||+|.++..|++. .++++|+++.++..+..+........+.+..+|+..+++++++||+|++.. +++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQW-VIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEES-CGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcc-hhh
Confidence 3569999999999999998864 578888887777555433222113357888999988988888999999887 688
Q ss_pred cccchH--HHHHHHHhhcCCCcEEEEEcCCCCC------CChhhHHHHHHHHHHHHhcCcEEEEEeece
Q 008748 232 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAYA------HDPENRRIWNAMYDLLKSMCWKIVSKKDQT 292 (555)
Q Consensus 232 ~~~d~~--~~L~el~RvLkPGG~lvis~P~~~~------~~~e~~~~~~~l~~l~~~~gw~vv~~~~~~ 292 (555)
+.+++. .++.++.++|||||+++++++.... ..........++.+++++.||+++......
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 887754 7999999999999999997753211 000000124578889999999988776543
No 24
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.51 E-value=4.7e-14 Score=141.64 Aligned_cols=101 Identities=18% Similarity=0.247 Sum_probs=80.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC------CCccccCChhhhhHHHHHHHHHc-CCCeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~------~V~~vdis~~dls~a~i~~A~~r-g~~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
+.+|||||||+|.++..|+++ +|+|+|+++.++..++.+..... ..++.+.++|+..+|++ .||+|++.+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~- 147 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNF- 147 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEES-
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeee-
Confidence 458999999999999999863 57888888888876664433222 24689999999999875 599999887
Q ss_pred ccccccch--HHHHHHHHhhcCCCcEEEEEcCC
Q 008748 229 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 229 ~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++||+++. ..+|++++|+|||||.|+++.+.
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 68888655 45899999999999999998643
No 25
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.51 E-value=6e-14 Score=136.28 Aligned_cols=101 Identities=13% Similarity=0.276 Sum_probs=80.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
+..+|||||||+|.++..+++. .++++|+++.++..+..+. .. ..++.+..+|+..++++ ++||+|++.. ++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~-~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l 119 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRF-RG-NLKVKYIEADYSKYDFE-EKYDMVVSAL-SI 119 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT-CS-CTTEEEEESCTTTCCCC-SCEEEEEEES-CG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhh-cc-CCCEEEEeCchhccCCC-CCceEEEEeC-cc
Confidence 4479999999999999998864 5778877776664443221 11 12789999999999988 8999999987 68
Q ss_pred ccccchH--HHHHHHHhhcCCCcEEEEEcCC
Q 008748 231 DWLQRDG--ILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 231 ~~~~d~~--~~L~el~RvLkPGG~lvis~P~ 259 (555)
++..++. .+++++.|+|||||+++++++.
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 8887765 4999999999999999998754
No 26
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.50 E-value=7.8e-14 Score=140.04 Aligned_cols=135 Identities=19% Similarity=0.250 Sum_probs=103.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCC-CCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLP-YPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp-~~d~sFDlVv~s~~~l 230 (555)
+.+|||||||+|.++..|++. .++++|+++.++..+..+. ...+ .++.+..+|+..++ +++++||+|+|.. ++
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-~l 146 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAA-EAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA-VL 146 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES-CG
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc-hh
Confidence 468999999999999999875 6888888887776665333 2333 35889999998887 7789999999887 68
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCCC------------------C-------hhhHHHHHHHHHHHHhcCcEE
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------------D-------PENRRIWNAMYDLLKSMCWKI 285 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~------------------~-------~e~~~~~~~l~~l~~~~gw~v 285 (555)
+|.+++..+++++.++|||||++++..+..... . ......-.++.+++++.||++
T Consensus 147 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v 226 (285)
T 4htf_A 147 EWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQI 226 (285)
T ss_dssp GGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEE
T ss_pred hcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCce
Confidence 999999999999999999999999987532100 0 000001247889999999999
Q ss_pred EEEeece
Q 008748 286 VSKKDQT 292 (555)
Q Consensus 286 v~~~~~~ 292 (555)
+......
T Consensus 227 ~~~~~~~ 233 (285)
T 4htf_A 227 MGKTGVR 233 (285)
T ss_dssp EEEEEES
T ss_pred eeeeeEE
Confidence 9777653
No 27
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.49 E-value=2.8e-13 Score=131.58 Aligned_cols=119 Identities=18% Similarity=0.313 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCC
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT 210 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~ 210 (555)
..+.+.+.+++... ..+..+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+.++.+.++|+
T Consensus 21 ~~~~~~~~~~l~~~------~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~d~ 93 (246)
T 1y8c_A 21 KKWSDFIIEKCVEN------NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKF-RSQGLKPRLACQDI 93 (246)
T ss_dssp HHHHHHHHHHHHTT------TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEECCCG
T ss_pred HHHHHHHHHHHHHh------CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHH-hhcCCCeEEEeccc
Confidence 44555556655432 123468999999999999999874 6888999888876666443 33445789999999
Q ss_pred CCCCCCCCCccEEEecccccccc---cchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 211 KRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 211 ~~Lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
..++++ ++||+|++...+++|. .+...+++++.++|+|||.+++..+.
T Consensus 94 ~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 94 SNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp GGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 888887 8899999876358887 56688999999999999999997653
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.49 E-value=1.1e-13 Score=132.11 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=95.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||||||+|.++..|++. .++++|+++.++ +.+++.+ .++.+..+|+..+ +++++||+|+|+. +++|
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~-----~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~-~l~~ 119 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLADRVTALDGSAEMI-----AEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH-WLAH 119 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHH-----HHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEES-CGGG
T ss_pred CCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHhcCCCCeEEEecccccC-CCCCceeEEEEec-hhhc
Confidence 358999999999999999864 567777766555 4444455 6789999999888 7789999999988 6888
Q ss_pred ccch--HHHHHHHHhhcCCCcEEEEEcCCCCCCChhh-------------------------HHHHHHHHHHHHhcCcEE
Q 008748 233 LQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPEN-------------------------RRIWNAMYDLLKSMCWKI 285 (555)
Q Consensus 233 ~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~~~e~-------------------------~~~~~~l~~l~~~~gw~v 285 (555)
.+++ ..+++++.++|||||.++++++......... ...-.++.+++++.||++
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 199 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSC 199 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEE
Confidence 8876 7799999999999999999875431000000 001247889999999996
Q ss_pred EEEee
Q 008748 286 VSKKD 290 (555)
Q Consensus 286 v~~~~ 290 (555)
...+.
T Consensus 200 ~~~~~ 204 (218)
T 3ou2_A 200 SVDEV 204 (218)
T ss_dssp EEEEE
T ss_pred Eeeec
Confidence 65443
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.49 E-value=2.2e-13 Score=131.09 Aligned_cols=150 Identities=15% Similarity=0.164 Sum_probs=102.0
Q ss_pred ccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC-----
Q 008748 130 DGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG----- 200 (555)
Q Consensus 130 ~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg----- 200 (555)
.......+.+.+.+.. .+..+|||||||+|.++..|++. .++++|+++.++..+..+......
T Consensus 12 ~~~~~~~~~l~~~l~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~ 83 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLKS--------VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQR 83 (219)
T ss_dssp CHHHHHHHHHHHHHHH--------TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHH
T ss_pred cchHHHHHHHHHHHhh--------cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccC
Confidence 3444444555555542 22468999999999999999863 688888888877666544322211
Q ss_pred CCeEEEEeCCCCCCCCCCCccEEEecccccccccch--HHHHHHHHhhcCCCcEEEEEcCCCC----CCCh---------
Q 008748 201 IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAY----AHDP--------- 265 (555)
Q Consensus 201 ~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~----~~~~--------- 265 (555)
.++.+..+|+..+++++++||+|+|.. +++|..++ ..+++++.++|||||+++++....+ ....
T Consensus 84 ~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~ 162 (219)
T 3jwg_A 84 KRISLFQSSLVYRDKRFSGYDAATVIE-VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDH 162 (219)
T ss_dssp TTEEEEECCSSSCCGGGTTCSEEEEES-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCC
T ss_pred cceEEEeCcccccccccCCCCEEEEHH-HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCc
Confidence 168999999988888788999999888 68888766 6799999999999996665432211 0000
Q ss_pred ---hhHHHH-HHHHHHHHhcCcEEEEE
Q 008748 266 ---ENRRIW-NAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 266 ---e~~~~~-~~l~~l~~~~gw~vv~~ 288 (555)
.....+ .-+.+++++.||++...
T Consensus 163 ~~~~~~~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 163 RFEWTRKEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp TTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred eeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence 011111 23448899999977643
No 30
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.48 E-value=8.4e-14 Score=137.06 Aligned_cols=99 Identities=16% Similarity=0.189 Sum_probs=82.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||||||+|.++..+++. .++++|+++.++..+..+. .....++.+.++|...+++++++||+|++.. +++|.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 117 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVH-LWHLV 117 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEES-CGGGC
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECC-chhhc
Confidence 468999999999999999875 5778887776665444322 2224578999999999999889999999887 68999
Q ss_pred cchHHHHHHHHhhcCCCcEEEEE
Q 008748 234 QRDGILLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis 256 (555)
++...++.++.++|||||+++++
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCcEEEEE
Confidence 99999999999999999999987
No 31
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.48 E-value=7.8e-14 Score=137.21 Aligned_cols=98 Identities=19% Similarity=0.313 Sum_probs=82.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..+++. .++++|+++.++ +.++++..++.+.++|+..++ ++++||+|+++. +++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~-----~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~ 106 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDML-----EKAADRLPNTNFGKADLATWK-PAQKADLLYANA-VFQ 106 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHH-----HHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEES-CGG
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHH-----HHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeC-chh
Confidence 468999999999999988753 677887776655 444455667899999999888 778999999887 699
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
|.++...++.++.++|||||+++++.|..
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 107 WVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp GSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred hCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 99999999999999999999999998754
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.48 E-value=6e-14 Score=134.33 Aligned_cols=128 Identities=17% Similarity=0.207 Sum_probs=95.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||||||+|.++..|++. .++++|+++.++..+. ++. ++.+..+|+..++ ++++||+|+|+. ++++.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-----~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~~ 115 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEAS-----RRL-GRPVRTMLFHQLD-AIDAYDAVWAHA-CLLHV 115 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHH-TSCCEECCGGGCC-CCSCEEEEEECS-CGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHH-----Hhc-CCceEEeeeccCC-CCCcEEEEEecC-chhhc
Confidence 468999999999999999875 5777777776654443 331 4567788888888 778999999988 57887
Q ss_pred c--chHHHHHHHHhhcCCCcEEEEEcCCCCCCChh------hHHHHHHHHHHHHhcC-cEEEEEeec
Q 008748 234 Q--RDGILLLELDRLLRPGGYFVYSSPEAYAHDPE------NRRIWNAMYDLLKSMC-WKIVSKKDQ 291 (555)
Q Consensus 234 ~--d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e------~~~~~~~l~~l~~~~g-w~vv~~~~~ 291 (555)
. +...+++++.++|||||+++++.+........ ....-+++.+++++.| |+++.....
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 6 66789999999999999999987653211000 0012357888999999 998876654
No 33
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.48 E-value=8e-14 Score=147.01 Aligned_cols=135 Identities=18% Similarity=0.181 Sum_probs=103.4
Q ss_pred CCCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHc----C----CCeEEEEeCCCCC------CC
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER----G----IPSTLGVLGTKRL------PY 215 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~r----g----~~v~~~~~d~~~L------p~ 215 (555)
+..+|||||||+|.++..|++. .|+++|+++.++..+..+..... | .++.+.++|+..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 3469999999999998888753 68899998887766654333221 3 5789999999887 89
Q ss_pred CCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhH----HH----------HHHHHHHHHhc
Q 008748 216 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR----RI----------WNAMYDLLKSM 281 (555)
Q Consensus 216 ~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~----~~----------~~~l~~l~~~~ 281 (555)
++++||+|++.. ++++.+++..+++++.|+|||||+|+++.+.......... .. +.++.+++++.
T Consensus 163 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 163 PDSSVDIVISNC-VCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCEEEEEEcc-chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 999999999887 6899999999999999999999999998654322211111 11 26788999999
Q ss_pred CcEEEEEee
Q 008748 282 CWKIVSKKD 290 (555)
Q Consensus 282 gw~vv~~~~ 290 (555)
||+.+....
T Consensus 242 GF~~v~~~~ 250 (383)
T 4fsd_A 242 GFRDVRLVS 250 (383)
T ss_dssp TCCCEEEEE
T ss_pred CCceEEEEe
Confidence 998775544
No 34
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.48 E-value=2.4e-13 Score=137.72 Aligned_cols=101 Identities=20% Similarity=0.226 Sum_probs=82.6
Q ss_pred CEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC----CCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG----IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg----~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
.+|||||||+|.++..|++. .|+++|+++.++..+..+. ...+ .++.+.++|+..+++ +++||+|+|+..++
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRL-AEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSI 161 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHH-HTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHH
T ss_pred CcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-hhcccccccceEEEeCchhcCCc-CCCcCEEEECCccc
Confidence 38999999999999999875 7888988888776665333 3333 578999999999988 58899999876678
Q ss_pred ccccc--hHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 231 DWLQR--DGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 231 ~~~~d--~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++... ...+|+++.++|||||+|++.++.
T Consensus 162 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 162 NELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp TTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 87753 477999999999999999998755
No 35
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=1.7e-13 Score=132.36 Aligned_cols=126 Identities=17% Similarity=0.213 Sum_probs=98.5
Q ss_pred CCEEEEECCCCcHHHHHHhcCCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 235 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d 235 (555)
..+|||||||+|.++..++.. +++|+++.++ +.++++ ++.+..+|+..+++++++||+|++.. ++++.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~-----~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMA-----EIARKR--GVFVLKGTAENLPLKDESFDFALMVT-TICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHH-----HHHHHT--TCEEEECBTTBCCSCTTCEEEEEEES-CGGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHH-----HHHHhc--CCEEEEcccccCCCCCCCeeEEEEcc-hHhhccC
Confidence 358999999999999999886 7888777665 444444 67888899989998888999999888 6888899
Q ss_pred hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhh---------------HHHHHHHHHHHHhcCcEEEEEeec
Q 008748 236 DGILLLELDRLLRPGGYFVYSSPEAYAHDPEN---------------RRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 236 ~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~---------------~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
+..++.++.++|+|||.++++.+......... .....++.+++++.||+++.....
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 99999999999999999999876532110000 002357889999999998876544
No 36
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=1.7e-13 Score=131.83 Aligned_cols=102 Identities=18% Similarity=0.301 Sum_probs=83.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccc--cc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR--ID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~--l~ 231 (555)
..+|||+|||+|.++..++.. .++++|+++.++..+..+. ...+.++.+..+|+..+++++++||+|+++. + ++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~~~~~ 116 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYA-KSRESNVEFIVGDARKLSFEDKTFDYVIFID-SIVHF 116 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCCCEEEECCTTSCCSCTTCEEEEEEES-CGGGC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCceEEECchhcCCCCCCcEEEEEEcC-chHhC
Confidence 468999999999999998875 6889999888776665433 3445778999999998888888999999886 4 44
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+..+...++.++.++|+|||.+++..+.
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4456778999999999999999998764
No 37
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=1.7e-13 Score=137.26 Aligned_cols=127 Identities=12% Similarity=0.205 Sum_probs=96.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||||||+|.++..+++. .|+++|+++.++ +.++++..++.+.++|+..+++ +++||+|++.. +++|.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~-~l~~~ 130 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMI-----EKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA-MLHWV 130 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHH-----HHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEES-CGGGC
T ss_pred CCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHH-----HHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcc-hhhhC
Confidence 468999999999999999863 577777766655 4445555678899999999987 47999999887 69999
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHH-----------------------HHHHHHHHHHhcCcEEEEEee
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR-----------------------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~-----------------------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
.++..++.++.|+|||||+++++.+.... ...... .-.++.+++++.||+++....
T Consensus 131 ~d~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 209 (279)
T 3ccf_A 131 KEPEAAIASIHQALKSGGRFVAEFGGKGN-IKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAAL 209 (279)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTT-THHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEE
T ss_pred cCHHHHHHHHHHhcCCCcEEEEEecCCcc-hHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEE
Confidence 99999999999999999999998765321 111111 123567788888988775543
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.46 E-value=2.7e-13 Score=136.08 Aligned_cols=132 Identities=12% Similarity=0.152 Sum_probs=97.2
Q ss_pred CCCEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..+++ ..|+++|+++.++..+..+. .+.+ .++.+..+|...+| ++||+|++.. +
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~-~ 138 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV-ANSENLRSKRVLLAGWEQFD---EPVDRIVSIG-A 138 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTCCCCSCEEEEESCGGGCC---CCCSEEEEES-C
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCCCeEEEECChhhCC---CCeeEEEEeC-c
Confidence 346899999999999999884 36888888887776555333 2233 36888899987776 7899999888 5
Q ss_pred cccc--cchHHHHHHHHhhcCCCcEEEEEcCCCCCCCh---------hhH-H----------------HHHHHHHHHHhc
Q 008748 230 IDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYAHDP---------ENR-R----------------IWNAMYDLLKSM 281 (555)
Q Consensus 230 l~~~--~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~---------e~~-~----------------~~~~l~~l~~~~ 281 (555)
++|. .+...+++++.|+|||||.+++..+....... ... . ...++.+++++.
T Consensus 139 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a 218 (287)
T 1kpg_A 139 FEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASAN 218 (287)
T ss_dssp GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTT
T ss_pred hhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhC
Confidence 8887 56788999999999999999997754311000 000 0 124778889999
Q ss_pred CcEEEEEeec
Q 008748 282 CWKIVSKKDQ 291 (555)
Q Consensus 282 gw~vv~~~~~ 291 (555)
||+++.....
T Consensus 219 Gf~~~~~~~~ 228 (287)
T 1kpg_A 219 GFTVTRVQSL 228 (287)
T ss_dssp TCEEEEEEEC
T ss_pred CcEEEEEEeC
Confidence 9998876654
No 39
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.46 E-value=2.2e-13 Score=135.04 Aligned_cols=96 Identities=20% Similarity=0.271 Sum_probs=78.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||||||+|.++..|++. .++++|+++.++ +.|+++..++.+.++|+..+++ +++||+|+|...+++|.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFGTVEGLELSADML-----AIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHH-----HHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGS
T ss_pred CCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHH-----HHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhc
Confidence 368999999999999999875 466776665544 5566666688999999999888 68999999887468887
Q ss_pred c---chHHHHHHHHhhcCCCcEEEEEc
Q 008748 234 Q---RDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 234 ~---d~~~~L~el~RvLkPGG~lvis~ 257 (555)
. +...+++++.++|||||+|++..
T Consensus 125 ~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4 45678999999999999999963
No 40
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=2e-13 Score=135.74 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=104.4
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCC
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT 210 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~ 210 (555)
..+.+.+.+.+.. .+..+|||||||+|.++..+++. .|+++|+++.++ +.++++. ++.+.++|+
T Consensus 20 ~~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~-~~~~~~~d~ 85 (261)
T 3ege_A 20 IRIVNAIINLLNL--------PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMR-----QQAVVHP-QVEWFTGYA 85 (261)
T ss_dssp HHHHHHHHHHHCC--------CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHH-----HSSCCCT-TEEEECCCT
T ss_pred HHHHHHHHHHhCC--------CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHH-----HHHHhcc-CCEEEECch
Confidence 3455666666653 23468999999999999999874 577777766544 4444433 889999999
Q ss_pred CCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCC--------CChhhHH-------HHHHHH
Q 008748 211 KRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--------HDPENRR-------IWNAMY 275 (555)
Q Consensus 211 ~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~--------~~~e~~~-------~~~~l~ 275 (555)
..+|+++++||+|+|.. +++|..++..+++++.|+|| ||++++.++.... ..+.... .-..+.
T Consensus 86 ~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (261)
T 3ege_A 86 ENLALPDKSVDGVISIL-AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN 163 (261)
T ss_dssp TSCCSCTTCBSEEEEES-CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH
T ss_pred hhCCCCCCCEeEEEEcc-hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH
Confidence 99999999999999888 58888999999999999999 9988887654211 1111111 123577
Q ss_pred HHHHhcCcEEEEEeec
Q 008748 276 DLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 276 ~l~~~~gw~vv~~~~~ 291 (555)
++++.||..+.....
T Consensus 164 -~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 164 -LLQENTKRRVEAIPF 178 (261)
T ss_dssp -HHHHHHCSEEEEEEC
T ss_pred -HHHHcCCCceeEEEe
Confidence 999999987766544
No 41
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.46 E-value=2.3e-13 Score=138.07 Aligned_cols=132 Identities=12% Similarity=0.168 Sum_probs=97.9
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..+++. .|+++|+++.++..+..+. ...+. ++.+..+|...+ +++||+|++.. +
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~-~ 146 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMF-DEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG-A 146 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH-HHSCCSSCEEEEECCGGGC---CCCCSEEEEES-C
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECCHHHc---CCCccEEEEcc-h
Confidence 3468999999999999998864 6889999888876666443 33343 588999998776 58999999887 6
Q ss_pred cccccch---------HHHHHHHHhhcCCCcEEEEEcCCCCCCChh----------------hH----------HHHHHH
Q 008748 230 IDWLQRD---------GILLLELDRLLRPGGYFVYSSPEAYAHDPE----------------NR----------RIWNAM 274 (555)
Q Consensus 230 l~~~~d~---------~~~L~el~RvLkPGG~lvis~P~~~~~~~e----------------~~----------~~~~~l 274 (555)
++|.+++ ..+++++.++|||||++++.++........ .. ..-.++
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~ 226 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQV 226 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHH
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHH
Confidence 8888655 689999999999999999977532110000 00 012367
Q ss_pred HHHHHhcCcEEEEEeec
Q 008748 275 YDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 275 ~~l~~~~gw~vv~~~~~ 291 (555)
.+++++.||+++..+..
T Consensus 227 ~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 227 DYYSSNAGWKVERYHRI 243 (302)
T ss_dssp HHHHHHHTCEEEEEEEC
T ss_pred HHHHHhCCcEEEEEEeC
Confidence 88899999998877654
No 42
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.46 E-value=5e-13 Score=128.61 Aligned_cols=100 Identities=18% Similarity=0.184 Sum_probs=80.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC------CCeEEEEeCCCCCCCCCCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG------IPSTLGVLGTKRLPYPSRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg------~~v~~~~~d~~~Lp~~d~sFDlVv~ 225 (555)
..+|||||||+|.++..|++. .++++|+++.++..+..+.. ..+ .++.+..+|+..++.++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD-RLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT-TCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH-HhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 358999999999999999863 68889888887766653332 222 2688999998888877789999998
Q ss_pred cccccccccch--HHHHHHHHhhcCCCcEEEEEc
Q 008748 226 SRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 226 s~~~l~~~~d~--~~~L~el~RvLkPGG~lvis~ 257 (555)
.. +++|..++ ..+++++.++|||||+++++.
T Consensus 109 ~~-~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 109 IE-VIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ES-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HH-HHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 88 68888766 789999999999999777654
No 43
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.45 E-value=1.7e-13 Score=133.26 Aligned_cols=130 Identities=22% Similarity=0.313 Sum_probs=98.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||||||+|.++..+++. .++++|+++.++ +.++++. .++.+..+|+..+++++++||+|++.. ++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 117 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKML-----ARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSL-AL 117 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHH-----HHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEES-CG
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHH-----HHHHHhcccCCceEEEcChhhccCCCCCceEEEEec-cc
Confidence 468999999999999999864 466777665554 4555443 257889999988988889999999888 68
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCC---------C-------------CC-------hhhH-------HHHHHH
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAY---------A-------------HD-------PENR-------RIWNAM 274 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~---------~-------------~~-------~e~~-------~~~~~l 274 (555)
++.++...+++++.++|+|||+++++.+... . .. .... ....++
T Consensus 118 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 197 (243)
T 3bkw_A 118 HYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTT 197 (243)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHH
T ss_pred cccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHH
Confidence 8888999999999999999999999874311 0 00 0000 024578
Q ss_pred HHHHHhcCcEEEEEeec
Q 008748 275 YDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 275 ~~l~~~~gw~vv~~~~~ 291 (555)
.+++++.||+++.....
T Consensus 198 ~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 198 LNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHTTCEEEEEEEC
T ss_pred HHHHHHcCCEeeeeccC
Confidence 89999999998876543
No 44
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.45 E-value=4e-14 Score=136.10 Aligned_cols=134 Identities=12% Similarity=0.024 Sum_probs=91.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHH------------cCCCeEEEEeCCCCCCCCC-CCc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALE------------RGIPSTLGVLGTKRLPYPS-RSF 220 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~------------rg~~v~~~~~d~~~Lp~~d-~sF 220 (555)
..+|||+|||+|.++..|+++ .|+|+|+|+.++..++.+.... ...++.+.++|+..+++++ ++|
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~f 102 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHC 102 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSE
T ss_pred CCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCE
Confidence 468999999999999999864 6888888888876655322110 1357899999999999875 799
Q ss_pred cEEEecccccccccch--HHHHHHHHhhcCCCcEEEEEcCCCCC---CChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 221 ELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA---HDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 221 DlVv~s~~~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~---~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
|+|++.. ++++.+.. ..+++++.|+|||||++++.+..... ..+...-.-+++.++++. ||++...+..
T Consensus 103 D~v~~~~-~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 103 AAFYDRA-AMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp EEEEEES-CGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred EEEEECc-chhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 9999876 46666433 45899999999999984443311100 000000012467777777 9987765543
No 45
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.45 E-value=7.2e-14 Score=141.35 Aligned_cols=132 Identities=8% Similarity=0.082 Sum_probs=88.5
Q ss_pred CCCEEEEECCCCcHHHHHH----hc--CCC----ccccCChhhhhHHHHHHHHHcCC-CeEE--EEeCCCCCC------C
Q 008748 155 NIRNVLDVGCGVASFGAYL----LS--HDI----IAMSLAPNDVHENQIQFALERGI-PSTL--GVLGTKRLP------Y 215 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~L----a~--~~V----~~vdis~~dls~a~i~~A~~rg~-~v~~--~~~d~~~Lp------~ 215 (555)
+..+|||||||+|.++..+ +. ..+ +++|+++.|+..+..+.+...+. ++.+ ..++.+.++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 3468999999999765433 22 123 88999988887666444322232 3443 344444443 5
Q ss_pred CCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhH-H--------------HHHHHHHHHHh
Q 008748 216 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR-R--------------IWNAMYDLLKS 280 (555)
Q Consensus 216 ~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~-~--------------~~~~l~~l~~~ 280 (555)
++++||+|+|++ ++||++|+..+|+++.|+|||||+|+++.+.......... . .-.++.+++++
T Consensus 132 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (292)
T 2aot_A 132 ELQKWDFIHMIQ-MLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDN 210 (292)
T ss_dssp CCCCEEEEEEES-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHH
T ss_pred CCCceeEEEEee-eeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHH
Confidence 678999999988 6999999999999999999999999997543210000000 0 11366788888
Q ss_pred cCcEEEE
Q 008748 281 MCWKIVS 287 (555)
Q Consensus 281 ~gw~vv~ 287 (555)
.||+++.
T Consensus 211 aGf~~~~ 217 (292)
T 2aot_A 211 LGLKYEC 217 (292)
T ss_dssp HTCCEEE
T ss_pred CCCceEE
Confidence 8887664
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.44 E-value=1.5e-13 Score=133.92 Aligned_cols=133 Identities=13% Similarity=0.109 Sum_probs=97.2
Q ss_pred CEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHH-cCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~-rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
.+|||||||+|.++..|++. .|+++|+++.++..+..+.... ...++.+.++|+..++. +++||+|++.. ++++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~-~l~~~ 145 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-TELFDLIFDYV-FFCAI 145 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-SSCEEEEEEES-STTTS
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-CCCeeEEEECh-hhhcC
Confidence 48999999999999999875 6788888887775554332211 12358899999988774 46899999887 57777
Q ss_pred c--chHHHHHHHHhhcCCCcEEEEEcCCCCCCC--hhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 234 Q--RDGILLLELDRLLRPGGYFVYSSPEAYAHD--PENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 234 ~--d~~~~L~el~RvLkPGG~lvis~P~~~~~~--~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
+ +...++.++.++|||||++++......... ........++.+++++.||+++..+..
T Consensus 146 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 146 EPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 6 668899999999999999998764321110 000012357888999999999876654
No 47
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=5.4e-13 Score=124.52 Aligned_cols=125 Identities=18% Similarity=0.262 Sum_probs=96.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..+++. .++++|+++.+ ++.++++..++.+...|+..+++++++||+|++...++++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~-----~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPIL-----IDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHH-----HHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHH-----HHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 458999999999999999875 46666665544 45555555678999999988888888999999874467776
Q ss_pred --cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 234 --QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 234 --~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
++...++.++.++|+|||.+++..+..... ...++.+++++.||+++.....
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFGAGRGW------VFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSC------CHHHHHHHHHHHTEEEEEEESS
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc------CHHHHHHHHHHcCCEEeeeecc
Confidence 344779999999999999999987654222 2346788899999998865443
No 48
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.43 E-value=3e-13 Score=128.34 Aligned_cols=130 Identities=13% Similarity=0.116 Sum_probs=95.8
Q ss_pred EEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc-cc
Q 008748 158 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQ 234 (555)
Q Consensus 158 ~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~-~~ 234 (555)
+|||||||+|.++..|++. .++++|+++.++..+.... ...+.++.+..+|+..+++++++||+|+++. .++ ..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLA-QEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHH-HHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHH-HhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHH
Confidence 8999999999999999875 6888888888776665333 3345688999999988888889999999865 333 34
Q ss_pred chHHHHHHHHhhcCCCcEEEEEcCCCCCC-----Ch---hhHHHHHHHHHHHHhcCcEEEEEeece
Q 008748 235 RDGILLLELDRLLRPGGYFVYSSPEAYAH-----DP---ENRRIWNAMYDLLKSMCWKIVSKKDQT 292 (555)
Q Consensus 235 d~~~~L~el~RvLkPGG~lvis~P~~~~~-----~~---e~~~~~~~l~~l~~~~gw~vv~~~~~~ 292 (555)
+...++.++.++|+|||+++++.+..... .+ ...-.-.++.++++ ||+++......
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~ 172 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLE 172 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEE
Confidence 56789999999999999999987543110 00 00112246777777 99988766543
No 49
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.43 E-value=1.7e-12 Score=122.18 Aligned_cols=133 Identities=17% Similarity=0.267 Sum_probs=96.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..+++. .++++|+++.++..+..+.......++.+..+|+..+++ +++||+|++.. +++|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~-~l~~~ 110 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTV-VLMFL 110 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEES-CGGGS
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcc-hhhhC
Confidence 358999999999999999864 688999998887766644433333368999999988888 78999999887 57777
Q ss_pred c--chHHHHHHHHhhcCCCcEEEEEcCCC---CCCChhh--HHHHHHHHHHHHhcCcEEEEEeece
Q 008748 234 Q--RDGILLLELDRLLRPGGYFVYSSPEA---YAHDPEN--RRIWNAMYDLLKSMCWKIVSKKDQT 292 (555)
Q Consensus 234 ~--d~~~~L~el~RvLkPGG~lvis~P~~---~~~~~e~--~~~~~~l~~l~~~~gw~vv~~~~~~ 292 (555)
. +...++.++.++|+|||++++..+.. +...... .-.-.++.++++. |+++......
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~~ 174 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNEDV 174 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECCE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecccc
Confidence 6 66789999999999999988765321 1000000 0011256666665 9888776553
No 50
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.42 E-value=1.5e-12 Score=125.41 Aligned_cols=127 Identities=10% Similarity=0.070 Sum_probs=97.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC--CCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp--~~d~sFDlVv~s~~~ 229 (555)
..+|||||||+|.++..++.. .++++|+++.++..+..+.......++.+..+|+..++ +++++||+|++.+ .
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~-~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF-S 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES-C
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC-C
Confidence 358999999999999988853 68999999988877765444333347899999988877 7788999999876 3
Q ss_pred ccccc--------chHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 230 IDWLQ--------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 230 l~~~~--------d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
.+|.. ....++.++.++|+|||.+++.+... .....+.+++++.||.++....+
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~d 182 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--------GLFEYSLVSFSQYGMKLNGVWLD 182 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHHCCCeeeecccc
Confidence 44432 12569999999999999999976431 23467777888899988766543
No 51
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.42 E-value=4.7e-13 Score=125.42 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=76.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC-CCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-YPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp-~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||+|||+|.++..|++. .|+++|+++.++..+..+.......++.+...+...++ +.+++||+|+++...++.
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~ 102 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPS 102 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC----
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCC
Confidence 468999999999999999974 78899999988877765444333356788887766653 456889999876333332
Q ss_pred --------ccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 233 --------LQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 233 --------~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
..+...++.++.++|||||+++++...
T Consensus 103 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 103 ADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp -------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred cchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 123356889999999999999997643
No 52
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.42 E-value=2e-13 Score=130.43 Aligned_cols=98 Identities=24% Similarity=0.359 Sum_probs=83.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 234 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~ 234 (555)
..+|||||||+|.++..+ .. .++++|+++.++ +.++++..++.+..+|...+++++++||+|++.. +++|.+
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~ 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAML-----AVGRRRAPEATWVRAWGEALPFPGESFDVVLLFT-TLEFVE 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHH-----HHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEES-CTTTCS
T ss_pred CCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHH-----HHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcC-hhhhcC
Confidence 468999999999999988 54 678888877665 4444444678899999999999889999999887 689999
Q ss_pred chHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 235 RDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 235 d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
++..+++++.++|||||.++++++..
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999999999999999999998764
No 53
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.42 E-value=3.9e-13 Score=133.75 Aligned_cols=165 Identities=10% Similarity=0.066 Sum_probs=111.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCC--CCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP--YPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp--~~d~sFDlVv~s~~ 228 (555)
..+|||+|||+|.++..++++ .|+++|+++.++..++.+... .+. ++.+..+|+..++ +++++||+|+++..
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~-~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAY-NQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHH-TTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHH-CCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 468999999999999999874 688999998888766654443 333 4899999987765 55789999998532
Q ss_pred cccc----c---------------cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 229 RIDW----L---------------QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 229 ~l~~----~---------------~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.+.. . .+...++.++.++|||||+++++.+.. ...++...+++.||......
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~~~~~~~~~ 199 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE---------RLLDIIDIMRKYRLEPKRIQ 199 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT---------THHHHHHHHHHTTEEEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH---------HHHHHHHHHHHCCCceEEEE
Confidence 1111 0 123568999999999999999987652 23467778888999887655
Q ss_pred eceEEeecCCCchhhhccCCCC-----CCCCCCC-CCCCCccccccc
Q 008748 290 DQTVIWAKPISNSCYLKRVPGS-----RPPLCSS-DDDPDVTWNVLM 330 (555)
Q Consensus 290 ~~~~iw~KPl~~~c~~~r~~~~-----~p~lc~~-~~~~~~~wy~~L 330 (555)
.......++.+......++.+. .|+++.. +++.++.+|..|
T Consensus 200 ~v~~~~~~~~~~~l~~~~k~~~~~~~~~~~l~i~~~~g~yt~~~~~~ 246 (259)
T 3lpm_A 200 FVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEI 246 (259)
T ss_dssp EEESSTTSCCSEEEEEEEETCCSCCEEEEEEECBCTTSSBCHHHHHH
T ss_pred EeecCCCCCcEEEEEEEEeCCCCCCeecCCEEEECCCCCcCHHHHHH
Confidence 5433333444444444444322 2445544 445677777655
No 54
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.42 E-value=1.3e-13 Score=135.73 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeC
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG 209 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d 209 (555)
..+.+.+++.+. .++.+|||||||+|..+..+++. .++++|+++.++..++ +.+...+..+.+..++
T Consensus 47 ~~~m~~~a~~~~---------~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~~ 116 (236)
T 3orh_A 47 TPYMHALAAAAS---------SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKGL 116 (236)
T ss_dssp HHHHHHHHHHHT---------TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEESC
T ss_pred HHHHHHHHHhhc---------cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEeeh
Confidence 455666666664 23468999999999999999874 6888999887775555 3444456677888887
Q ss_pred CCCC--CCCCCCccEEEec----ccccccccchHHHHHHHHhhcCCCcEEEEEcCCC------CCCChhhHHHH-HHHHH
Q 008748 210 TKRL--PYPSRSFELAHCS----RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA------YAHDPENRRIW-NAMYD 276 (555)
Q Consensus 210 ~~~L--p~~d~sFDlVv~s----~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~------~~~~~e~~~~~-~~l~~ 276 (555)
.+.+ ++++++||.|++- ...+++..+...++.++.|+|||||.|++..... ..+.. ....+ +....
T Consensus 117 a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 195 (236)
T 3orh_A 117 WEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSD-ITIMFEETQVP 195 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSC-HHHHHHHHTHH
T ss_pred HHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhh-hhhhhHHHHHH
Confidence 6543 5778899999741 2245566778889999999999999999853110 00111 11222 34456
Q ss_pred HHHhcCcEEEE
Q 008748 277 LLKSMCWKIVS 287 (555)
Q Consensus 277 l~~~~gw~vv~ 287 (555)
.+.+.||++..
T Consensus 196 ~L~eaGF~~~~ 206 (236)
T 3orh_A 196 ALLEAGFRREN 206 (236)
T ss_dssp HHHHHTCCGGG
T ss_pred HHHHcCCeEEE
Confidence 67788997543
No 55
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.42 E-value=2.2e-13 Score=125.82 Aligned_cols=125 Identities=12% Similarity=0.127 Sum_probs=93.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..+++. .++++|+++.++ +.++++..++.+...| +++++++||+|++.. ++++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~-----~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~-~l~~~ 88 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIAL-----KEVKEKFDSVITLSDP---KEIPDNSVDFILFAN-SFHDM 88 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHH-----HHHHHHCTTSEEESSG---GGSCTTCEEEEEEES-CSTTC
T ss_pred CCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHH-----HHHHHhCCCcEEEeCC---CCCCCCceEEEEEcc-chhcc
Confidence 458999999999999999875 577777766554 4555556678888887 778889999999888 68888
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcCCCCCC----ChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSPEAYAH----DPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P~~~~~----~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
+++..+++++.|+|||||+++++.+..... .....-.-.++.++++ ||+++.....
T Consensus 89 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 89 DDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred cCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 899999999999999999999987542111 0010012245667777 9998876654
No 56
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.41 E-value=3.2e-13 Score=129.55 Aligned_cols=101 Identities=17% Similarity=0.344 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
+..+|||||||+|.++..|++. .++++|+++.++..+..+.. . ..++.+.++|+..++ ++++||+|+|+. +++|
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~-~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~ 126 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTK-R-WSHISWAATDILQFS-TAELFDLIVVAE-VLYY 126 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTT-T-CSSEEEEECCTTTCC-CSCCEEEEEEES-CGGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcc-c-CCCeEEEEcchhhCC-CCCCccEEEEcc-HHHh
Confidence 3468999999999999999875 67788887776654442221 1 236899999998888 678999999987 6888
Q ss_pred ccch---HHHHHHHHhhcCCCcEEEEEcCC
Q 008748 233 LQRD---GILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 233 ~~d~---~~~L~el~RvLkPGG~lvis~P~ 259 (555)
..++ ..++.++.++|||||+++++++.
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 8876 45799999999999999998754
No 57
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.41 E-value=4.1e-13 Score=134.56 Aligned_cols=138 Identities=17% Similarity=0.250 Sum_probs=102.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCC-CCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPY-PSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~-~d~sFDlVv~s~~~ 229 (555)
..+|||||||+|.++..+++. .++++|+++.++..+..+. ...+. ++.+.++|+..+++ ++++||+|+|.. +
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-~ 142 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF-S 142 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES-C
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECc-h
Confidence 368999999999998888753 6889999888876665333 22332 47889999988888 678999999887 4
Q ss_pred ccc----ccchHHHHHHHHhhcCCCcEEEEEcCCCCC-----------------------CChh----------------
Q 008748 230 IDW----LQRDGILLLELDRLLRPGGYFVYSSPEAYA-----------------------HDPE---------------- 266 (555)
Q Consensus 230 l~~----~~d~~~~L~el~RvLkPGG~lvis~P~~~~-----------------------~~~e---------------- 266 (555)
+|| ..+...++.++.++|||||++++++|.... ..+.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 222 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNN 222 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSS
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcC
Confidence 766 456678999999999999999998765210 0000
Q ss_pred ---hHHHHHHHHHHHHhcCcEEEEEeeceEEe
Q 008748 267 ---NRRIWNAMYDLLKSMCWKIVSKKDQTVIW 295 (555)
Q Consensus 267 ---~~~~~~~l~~l~~~~gw~vv~~~~~~~iw 295 (555)
.....+++.+++++.||+++.......++
T Consensus 223 ~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~ 254 (298)
T 1ri5_A 223 CIEYFVDFTRMVDGFKRLGLSLVERKGFIDFY 254 (298)
T ss_dssp EEEECCCHHHHHHHHHTTTEEEEEEEEHHHHH
T ss_pred CcccccCHHHHHHHHHHcCCEEEEecCHHHHH
Confidence 00023688999999999999877654433
No 58
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.41 E-value=4.2e-13 Score=136.55 Aligned_cols=132 Identities=18% Similarity=0.160 Sum_probs=97.9
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..|+. ..++++|+++.++..+..+. ...+. ++.+.++|+..++++ ++||+|++..
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~- 195 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLA-AGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG- 195 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS-
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECchhcCCcc-CCeEEEEECC-
Confidence 46899999999999999852 26788888887776555333 22333 388999999999988 8999999877
Q ss_pred ccccccchHH---HHHHHHhhcCCCcEEEEEcCCC---------CC---CChhhH------------------HHHHHHH
Q 008748 229 RIDWLQRDGI---LLLELDRLLRPGGYFVYSSPEA---------YA---HDPENR------------------RIWNAMY 275 (555)
Q Consensus 229 ~l~~~~d~~~---~L~el~RvLkPGG~lvis~P~~---------~~---~~~e~~------------------~~~~~l~ 275 (555)
+++|.+++.. +++++.++|||||+++++.... |. ...... ....++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 5888777755 7999999999999999987331 10 011000 0235788
Q ss_pred HHHHhcCcEEEEEee
Q 008748 276 DLLKSMCWKIVSKKD 290 (555)
Q Consensus 276 ~l~~~~gw~vv~~~~ 290 (555)
+++++.||+++....
T Consensus 276 ~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 276 AQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHHTTCEEEEEEC
T ss_pred HHHHHCCCEEEEEEc
Confidence 999999999987764
No 59
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.40 E-value=2.8e-13 Score=129.80 Aligned_cols=127 Identities=19% Similarity=0.229 Sum_probs=93.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC---CCCC-CCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L---p~~d-~sFDlVv~s~~~ 229 (555)
+.+|||||||+|.++..|++. .++++|+++.+ ++.++++ ..+.+...+...+ ++.. ++||+|+|+. +
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~-----~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~-~ 125 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGIEAVGVDGDRTL-----VDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANF-A 125 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHH-----HHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEES-C
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHH-----HHHHHHh-cccccchhhHHhhcccccccCCCccEEEECc-h
Confidence 368999999999999999875 46666666544 4555555 5566777776555 5444 4599999987 5
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChh-----------------------hHHHHHHHHHHHHhcCcEEE
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------------NRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e-----------------------~~~~~~~l~~l~~~~gw~vv 286 (555)
++ ..++..+++++.++|||||+++++++........ ......++.+++++.||+++
T Consensus 126 l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 126 LL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp CC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred hh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 66 7888999999999999999999988753211100 00123578899999999998
Q ss_pred EEee
Q 008748 287 SKKD 290 (555)
Q Consensus 287 ~~~~ 290 (555)
....
T Consensus 205 ~~~~ 208 (227)
T 3e8s_A 205 SLQE 208 (227)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7654
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.40 E-value=8.3e-13 Score=133.71 Aligned_cols=100 Identities=12% Similarity=0.190 Sum_probs=83.6
Q ss_pred CCCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHH--cCCCeEEEEeCCCCCCCCC------CCcc
Q 008748 155 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALE--RGIPSTLGVLGTKRLPYPS------RSFE 221 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~--rg~~v~~~~~d~~~Lp~~d------~sFD 221 (555)
+..+|||||||+|.++..|++ ..|+++|+++.++..+....... ...++.+.++|+..+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 346999999999999999983 26889999888886666443332 1567899999999998877 8999
Q ss_pred EEEecccccccccchHHHHHHHHhhcCCCcEEEEE
Q 008748 222 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 222 lVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis 256 (555)
+|+|+. ++||. ++..++.++.++|||||.|++.
T Consensus 116 ~V~~~~-~l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 116 MITAVE-CAHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEES-CGGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeHhh-HHHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 999988 68888 9999999999999999999983
No 61
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.40 E-value=2.8e-12 Score=124.60 Aligned_cols=100 Identities=18% Similarity=0.312 Sum_probs=81.6
Q ss_pred CEEEEECCCCcHHHHHHhcC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc--
Q 008748 157 RNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 233 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~-~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~-- 233 (555)
.+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+.++.+..+|+..++++ ++||+|++...+++|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~ 112 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKA-METNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQT 112 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHH-HHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCS
T ss_pred CeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhh-hhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCC
Confidence 58999999999999999874 6888999888876666433 33456789999999888876 7899999875457777
Q ss_pred -cchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 234 -QRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 234 -~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
.+...+++++.++|+|||.+++..+
T Consensus 113 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 113 EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 4556799999999999999998654
No 62
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.39 E-value=7.6e-13 Score=128.34 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=78.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..|++. .++++|+++.++ +.|+++..++.+..+|+..+++ +++||+|+|+..+++|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDML-----THARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHH-----HHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGC
T ss_pred CCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHH-----HHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhc
Confidence 358999999999999999874 577777766655 4555555678999999988887 67899999876678887
Q ss_pred ---cchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 234 ---QRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 234 ---~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
.+...+++++.++|+|||.+++..+
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4456799999999999999999764
No 63
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.38 E-value=4.5e-13 Score=136.69 Aligned_cols=101 Identities=11% Similarity=0.161 Sum_probs=80.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..+++. .|+++|+++.++..+.... .+.+ ..+.+..+|...++ ++||+|++.. +
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~-~ 164 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVL-ASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE-A 164 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTSCCSSCEEEEESCGGGCC---CCCSEEEEES-C
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECChHHCC---CCcCEEEEeC-h
Confidence 3468999999999999998853 6888888888776655333 3333 34888899987775 7899999888 5
Q ss_pred cccc--cchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 230 IDWL--QRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 230 l~~~--~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
++|. ++...++.++.++|||||.+++.++..
T Consensus 165 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 165 FEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 8888 677889999999999999999987654
No 64
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.38 E-value=1.8e-12 Score=125.63 Aligned_cols=124 Identities=10% Similarity=0.145 Sum_probs=93.3
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCC--CCCCCccEEEecccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP--YPSRSFELAHCSRCR 229 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp--~~d~sFDlVv~s~~~ 229 (555)
.+|||||||+|.++..|++. .++|+|+++.++..+..+.. +.+ .++.+..+|+..++ +++++||.|++.+.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~-~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~- 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK-DSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS- 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH-HSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC-
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH-HcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC-
Confidence 58999999999999998853 68999999988877664443 334 46899999988776 77889999987652
Q ss_pred cccccc--------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 230 IDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 230 l~~~~d--------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
.+|... ...++.++.++|||||.|++.+... .....+.+.+++.||.......
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~--------~~~~~~~~~~~~~g~~~~~~~~ 178 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR--------GLFEYSLKSFSEYGLLLTYVSL 178 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCccccccc
Confidence 334321 2568999999999999999976441 2345666777888998765443
No 65
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.38 E-value=8.7e-13 Score=126.57 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=90.3
Q ss_pred CCEEEEECCCCcHHHHHHhcCCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 235 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d 235 (555)
..+|||||||+|.++..++ ..++++|+++. .+.+..+|+..+++++++||+|++.. ++|+ .+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~-~~ 129 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCL-SLMG-TN 129 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEES-CCCS-SC
T ss_pred CCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEeh-hccc-cC
Confidence 3589999999999999885 57899999876 45677889888999889999999987 4665 78
Q ss_pred hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 236 DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 236 ~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
...++.++.++|+|||+++++.+..... .-.++.+++++.||+++...
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEEEEEe
Confidence 8899999999999999999987653211 23577888999999988654
No 66
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.38 E-value=1.3e-12 Score=125.26 Aligned_cols=130 Identities=15% Similarity=0.266 Sum_probs=96.6
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCC--CCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR--LPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~--Lp~~d~sFDlVv~s~~~l 230 (555)
+..+|||+|||+|.++..+++. .++++|+++. +++.++++. ..+..+|+.. +++++++||+|++.. ++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~-----~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~-~l 103 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPE-----AAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGD-VL 103 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHH-----HHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEES-CG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHH-----HHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECC-hh
Confidence 3468999999999999999875 4556665554 445555543 3677888765 677788999999887 68
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCC-------------CC------hh--hHHHHHHHHHHHHhcCcEEEEEe
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-------------HD------PE--NRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~-------------~~------~e--~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
+|..++..++.++.++|+|||+++++.|.... .. .. ......++.+++++.||+++...
T Consensus 104 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 104 EHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp GGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 88889999999999999999999998865311 00 00 00123578899999999988766
Q ss_pred ece
Q 008748 290 DQT 292 (555)
Q Consensus 290 ~~~ 292 (555)
...
T Consensus 184 ~~~ 186 (230)
T 3cc8_A 184 RVY 186 (230)
T ss_dssp EEE
T ss_pred ecc
Confidence 644
No 67
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=6.8e-13 Score=134.67 Aligned_cols=134 Identities=14% Similarity=0.211 Sum_probs=93.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHc--------------------------------
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-------------------------------- 199 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~r-------------------------------- 199 (555)
..+|||||||+|.++..|+.. .|+|+|+++.++..+..+.....
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 469999999999999998863 68899998887766653322110
Q ss_pred --------------------------CCCeEEEEeCCCCCC-----CCCCCccEEEeccccccccc------chHHHHHH
Q 008748 200 --------------------------GIPSTLGVLGTKRLP-----YPSRSFELAHCSRCRIDWLQ------RDGILLLE 242 (555)
Q Consensus 200 --------------------------g~~v~~~~~d~~~Lp-----~~d~sFDlVv~s~~~l~~~~------d~~~~L~e 242 (555)
..++.+..+|+...+ +.+++||+|+|.. +++|+. +...++++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~-vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLS-LTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEES-CHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEECh-HHHHhhhcCCHHHHHHHHHH
Confidence 035888888876544 5678999999887 576653 55779999
Q ss_pred HHhhcCCCcEEEEEcCCCC-----C-CChhhHHHH-------HHHHHHHHh--cCcEEEEEee
Q 008748 243 LDRLLRPGGYFVYSSPEAY-----A-HDPENRRIW-------NAMYDLLKS--MCWKIVSKKD 290 (555)
Q Consensus 243 l~RvLkPGG~lvis~P~~~-----~-~~~e~~~~~-------~~l~~l~~~--~gw~vv~~~~ 290 (555)
+.++|||||+|++...... . ........+ .++..++.+ .||+.++...
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 9999999999999765421 0 111112222 267788888 9997766544
No 68
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.37 E-value=2.6e-12 Score=122.48 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=100.5
Q ss_pred CCCCCCCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHH
Q 008748 122 PGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE 198 (555)
Q Consensus 122 ~~~g~~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~ 198 (555)
.+.+..|..+.....+.+.+.+... + .+..+|||+|||+|.++..+++. .++++|+++.++..+..+.. .
T Consensus 33 ~~~~~~f~~~~~~~~~~~~~~l~~~---~---~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-~ 105 (205)
T 3grz_A 33 LDPGLAFGTGNHQTTQLAMLGIERA---M---VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAA-L 105 (205)
T ss_dssp ESCC-----CCHHHHHHHHHHHHHH---C---SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-H
T ss_pred ecCCcccCCCCCccHHHHHHHHHHh---c---cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-H
Confidence 3334444544444444444444311 0 12368999999999999998864 68899999888876664443 3
Q ss_pred cCC-CeEEEEeCCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHH
Q 008748 199 RGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDL 277 (555)
Q Consensus 199 rg~-~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l 277 (555)
.+. ++.+..+|.... .+++||+|++.. .+++ ...+++++.++|+|||+++++..... ....+.++
T Consensus 106 ~~~~~v~~~~~d~~~~--~~~~fD~i~~~~-~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~ 171 (205)
T 3grz_A 106 NGIYDIALQKTSLLAD--VDGKFDLIVANI-LAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL--------QLPKIEQA 171 (205)
T ss_dssp TTCCCCEEEESSTTTT--CCSCEEEEEEES-CHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG--------GHHHHHHH
T ss_pred cCCCceEEEecccccc--CCCCceEEEECC-cHHH---HHHHHHHHHHhcCCCCEEEEEecCcc--------cHHHHHHH
Confidence 344 388888887654 357899999876 3544 36789999999999999999754421 24567888
Q ss_pred HHhcCcEEEEEee
Q 008748 278 LKSMCWKIVSKKD 290 (555)
Q Consensus 278 ~~~~gw~vv~~~~ 290 (555)
+++.||+++....
T Consensus 172 ~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 172 LAENSFQIDLKMR 184 (205)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHcCCceEEeec
Confidence 9999999887554
No 69
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.37 E-value=1.8e-11 Score=116.64 Aligned_cols=117 Identities=14% Similarity=0.008 Sum_probs=90.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++..+++. .++++|+++.++..++.+.......++.+..+|........++||+|++... ++
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~~ 119 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS-GG 119 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC-TT
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC-Cc
Confidence 468999999999999998863 5889999998887776544433334688899987554434467999998763 33
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcE
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 284 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~ 284 (555)
+...++.++.++|||||.+++..+.. ....++.+.+++.||.
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 120 ---MLEEIIDAVDRRLKSEGVIVLNAVTL--------DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp ---CHHHHHHHHHHHCCTTCEEEEEECBH--------HHHHHHHHHHHHTTCE
T ss_pred ---CHHHHHHHHHHhcCCCeEEEEEeccc--------ccHHHHHHHHHHCCCc
Confidence 66789999999999999999977542 3456788889999993
No 70
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.37 E-value=6.3e-13 Score=133.59 Aligned_cols=119 Identities=18% Similarity=0.223 Sum_probs=91.3
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHc----CCCeEEE
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----GIPSTLG 206 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~r----g~~v~~~ 206 (555)
..+.+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++..+..+..... ..++.+.
T Consensus 43 ~~~~~~l~~~l~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 43 AEYKAWLLGLLRQ--------HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp HHHHHHHHHHHHH--------TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred HHHHHHHHHHhcc--------cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEe
Confidence 4455555555542 12368999999999999999875 68888888888766654332211 1356788
Q ss_pred EeCCCCCC---CCCCCccEEEecccccccccc-------hHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 207 VLGTKRLP---YPSRSFELAHCSRCRIDWLQR-------DGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 207 ~~d~~~Lp---~~d~sFDlVv~s~~~l~~~~d-------~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
.+|...++ +++++||+|+|...+++|..+ ...+++++.++|||||+++++.|.
T Consensus 115 ~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 115 EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 88888887 788999999997336888888 788999999999999999998876
No 71
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.37 E-value=6.2e-14 Score=148.84 Aligned_cols=130 Identities=13% Similarity=0.155 Sum_probs=94.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeE---EEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPST---LGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~---~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..|++. .++++|+++. +++.|++++.+.. +...+...+++++++||+|++.+ +
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~-v 180 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSG-----VAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAAN-T 180 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHH-----HHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEES-C
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHH-----HHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECC-h
Confidence 3469999999999999999875 5666666554 4466666654432 12233455667778999999888 6
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCC--------CC-Chhh--HHHHHHHHHHHHhcCcEEEEEee
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAY--------AH-DPEN--RRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~--------~~-~~e~--~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
++|.+++..+++++.|+|||||++++..|... .. ..+. .....++..++++.||+++....
T Consensus 181 l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 181 LCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp GGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 99999999999999999999999999876520 00 0000 01224788999999999886654
No 72
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.37 E-value=8.8e-13 Score=131.07 Aligned_cols=92 Identities=24% Similarity=0.415 Sum_probs=74.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..+++. .++++|+++ .+++.|+++..++.+..+|...+++++++||+|++... .
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~- 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK-----VAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P- 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH-----HHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C-
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h-
Confidence 458999999999999998864 456666555 44566666677889999999999998899999998663 2
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
..+.++.|+|||||.+++++|..
T Consensus 159 ------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999998774
No 73
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.36 E-value=6.8e-12 Score=124.67 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=79.7
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChh------hhhHHHHHHHHHcC--CCeEEEEeC---CCCCCCCCCC
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPN------DVHENQIQFALERG--IPSTLGVLG---TKRLPYPSRS 219 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~------dls~a~i~~A~~rg--~~v~~~~~d---~~~Lp~~d~s 219 (555)
..+|||||||+|.++..+++ ..++++|+++. ++..++.+. ...+ .++.+..+| ...+|+++++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHL-LAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHH-HTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHH-HhcCCCCceEEEECChhhhccCCCCCCC
Confidence 46899999999999998875 36889999986 665555333 3333 357888887 5566778899
Q ss_pred ccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 220 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 220 FDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
||+|+|.. +++|..++..+++.+.++++|||++++....
T Consensus 123 fD~v~~~~-~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 123 FDRVVLAH-SLWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CSEEEEES-CGGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred EEEEEEcc-chhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 99999888 5888888888777777888889999997643
No 74
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.36 E-value=7.3e-13 Score=132.21 Aligned_cols=136 Identities=13% Similarity=0.093 Sum_probs=92.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHc-----------------------------CCC
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-----------------------------GIP 202 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~r-----------------------------g~~ 202 (555)
+..+|||||||+|.++..++.. .|+++|+++.++..+......+. ...
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 3468999999999887766543 58999999998876653321110 011
Q ss_pred eE-EEEeCCCC-CCC---CCCCccEEEecccccccc----cchHHHHHHHHhhcCCCcEEEEEcCCC---CCCChh----
Q 008748 203 ST-LGVLGTKR-LPY---PSRSFELAHCSRCRIDWL----QRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPE---- 266 (555)
Q Consensus 203 v~-~~~~d~~~-Lp~---~d~sFDlVv~s~~~l~~~----~d~~~~L~el~RvLkPGG~lvis~P~~---~~~~~e---- 266 (555)
+. +.++|+.. .|+ ..++||+|+|++ ++|++ ++...+++++.|+|||||+|+++.... +.....
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~-~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLL-AMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehH-HHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 22 77888766 343 357899999998 47764 455679999999999999999986321 000000
Q ss_pred hHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 267 NRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 267 ~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
..-.-+++.+++++.||+++.....
T Consensus 214 ~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 214 VALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEeec
Confidence 0001247888999999998866553
No 75
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.35 E-value=1.2e-12 Score=124.46 Aligned_cols=101 Identities=16% Similarity=0.226 Sum_probs=81.6
Q ss_pred CCEEEEECCCCcHHH-HHHhc--CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFG-AYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a-~~La~--~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||+|||+|.++ ..++. ..++++|+++.++..+... +...+.++.+..+|+..+++++++||+|++.. +++|
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 101 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENF-SRENNFKLNISKGDIRKLPFKDESMSFVYSYG-TIFH 101 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHH-HHHHTCCCCEEECCTTSCCSCTTCEEEEEECS-CGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEECchhhCCCCCCceeEEEEcC-hHHh
Confidence 368999999999874 44443 3688999999888766643 33345678899999999999889999999887 5777
Q ss_pred c--cchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 233 L--QRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 233 ~--~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
. .+...++.++.++|||||+++++.+
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 7 6678899999999999999999764
No 76
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.35 E-value=4.8e-13 Score=133.58 Aligned_cols=133 Identities=11% Similarity=0.027 Sum_probs=91.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHH-----------------HcCCCeEEEEeCCCCCCCC
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFAL-----------------ERGIPSTLGVLGTKRLPYP 216 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~-----------------~rg~~v~~~~~d~~~Lp~~ 216 (555)
..+|||+|||+|..+..|++. .|+|+|+|+.++..+..+... ..+.++.+.++|+..++++
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~ 148 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRA 148 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcc
Confidence 468999999999999999975 688888888877655422210 0135789999999999876
Q ss_pred C-CCccEEEecccccccccc--hHHHHHHHHhhcCCCcEEEEEcCC-C--CCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 217 S-RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPE-A--YAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 217 d-~sFDlVv~s~~~l~~~~d--~~~~L~el~RvLkPGG~lvis~P~-~--~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
+ ++||+|++.. ++++++. ...+++++.|+|||||+|++++.. . ....+...-.-+++.+++.. +|+++..+.
T Consensus 149 ~~~~FD~V~~~~-~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 149 NIGKFDRIWDRG-ALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp CCCCEEEEEESS-STTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEEE
T ss_pred cCCCEEEEEEhh-hhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEec
Confidence 4 8999999876 4666643 356899999999999999754311 0 00000000012467777776 598876654
No 77
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.35 E-value=1.2e-12 Score=138.33 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=94.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc-
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW- 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~- 232 (555)
..+|||+|||+|.++..+++. .|+++|+++.++..+..+. ...+..+.+..+|+...+.++++||+|+|+. .+|+
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~-~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~np-p~~~~ 311 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGL-EANALKAQALHSDVDEALTEEARFDIIVTNP-PFHVG 311 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTTTTSCTTCCEEEEEECC-CCCTT
T ss_pred CCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HHcCCCeEEEEcchhhccccCCCeEEEEECC-chhhc
Confidence 468999999999999999875 6889999888887666443 4456678999999988877778999999876 4666
Q ss_pred ----ccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEE
Q 008748 233 ----LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 233 ----~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~ 288 (555)
..+...++.++.++|||||.++++............+.+..++.+ ++.||+++..
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~~v~~l-~~~gF~Vl~a 370 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTL-KVAEYKVLFA 370 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSCCEEE-EESSSEEEEE
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhccEEEE-eCCCEEEEEE
Confidence 345577999999999999999998876532222222223333333 4555555543
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.34 E-value=1.5e-11 Score=114.50 Aligned_cols=133 Identities=16% Similarity=0.144 Sum_probs=92.9
Q ss_pred eeeeCCCCCCCCcc-HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHH
Q 008748 118 KINFPGGGTHFHDG-ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQ 194 (555)
Q Consensus 118 ~~~F~~~g~~f~~~-a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~ 194 (555)
.+.|......|... .+...+.+.+.+.. .+..+|||+|||+|.++..+++. .++++|+++.++..+..+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~ 93 (194)
T 1dus_A 22 KLKFKTDSGVFSYGKVDKGTKILVENVVV--------DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKEN 93 (194)
T ss_dssp EEEEEEETTSTTTTSCCHHHHHHHHHCCC--------CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH
T ss_pred ceEEEeCCCcCCccccchHHHHHHHHccc--------CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHH
Confidence 44453333344433 22344555555542 23468999999999999999864 688899988887666644
Q ss_pred HHHHcCCC--eEEEEeCCCCCCCCCCCccEEEeccccccc-ccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 195 FALERGIP--STLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 195 ~A~~rg~~--v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~-~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
.......+ +.+..+|+.. ++++++||+|++.. .+++ ..+...+++++.++|+|||.+++..+..
T Consensus 94 ~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 94 IKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP-PIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC-CSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHcCCCccceEEEECchhc-ccccCCceEEEECC-CcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 43322233 8899898766 34467899999876 4555 3556789999999999999999988764
No 79
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.34 E-value=1.1e-12 Score=130.23 Aligned_cols=99 Identities=20% Similarity=0.402 Sum_probs=80.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||||||+|.++..|++. .++++|+++.++ +.++++.... +.++|+..+++++++||+|++....+|+.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l-----~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEML-----EVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHH-----HHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHH-----HHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 358999999999999999875 567777766555 4444443332 78889999999889999999887666776
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
.++..+++++.++|||||.++++.+..
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 888999999999999999999988764
No 80
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.34 E-value=2.9e-12 Score=121.85 Aligned_cols=102 Identities=24% Similarity=0.382 Sum_probs=80.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||+|||+|.++..+++. .++++|+++.++..+..+.. ...++.+.++|+..+++++++||+|++.. ++++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~--~~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~~~~ 119 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYA--HVPQLRWETMDVRKLDFPSASFDVVLEKG-TLDA 119 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTT--TCTTCEEEECCTTSCCSCSSCEEEEEEES-HHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcc--cCCCcEEEEcchhcCCCCCCcccEEEECc-chhh
Confidence 358999999999999999864 67888888776655443222 12468899999998998889999999876 3433
Q ss_pred c---------------cchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 233 L---------------QRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 233 ~---------------~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
. .+...++.++.++|||||.+++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 3 355779999999999999999998764
No 81
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.34 E-value=8.3e-13 Score=135.28 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=76.7
Q ss_pred CCEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHHHHHHHHHcCCC-------eEEEEeCC------CCC--CCCC
Q 008748 156 IRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIP-------STLGVLGT------KRL--PYPS 217 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a~i~~A~~rg~~-------v~~~~~d~------~~L--p~~d 217 (555)
..+|||||||+|..+..++. ..|+|+|+++.++..++.+.. +.+.. +.+.+.++ ..+ ++++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~-~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYN-KLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHH-hccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46899999999976554443 268999999999987775433 33322 45777776 323 3567
Q ss_pred CCccEEEecccccccc---cchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 218 RSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 218 ~sFDlVv~s~~~l~~~---~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++||+|+|.+ ++||. ++...+++++.|+|||||+|++++|.
T Consensus 128 ~~FD~V~~~~-~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQF-AIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEES-CGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECc-hHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 8999999988 57775 34477999999999999999999876
No 82
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.33 E-value=2e-11 Score=117.41 Aligned_cols=120 Identities=13% Similarity=-0.025 Sum_probs=91.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++..+++. .|+++|+++.++..+..+ +...+. ++.+..+|+........+||+|++.. .+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~-~~- 132 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKN-IDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG-GG- 132 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS-CC-
T ss_pred CCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC-cc-
Confidence 468999999999999998864 688999998888666644 333443 58899999877332335799999765 23
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
+.. ++.++.++|||||+++++.... ....++.+.+++.|+++.....
T Consensus 133 ---~~~-~l~~~~~~LkpgG~lv~~~~~~--------~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 133 ---SQA-LYDRLWEWLAPGTRIVANAVTL--------ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp ---CHH-HHHHHHHHSCTTCEEEEEECSH--------HHHHHHHHHHHHHCSEEEEEEE
T ss_pred ---cHH-HHHHHHHhcCCCcEEEEEecCc--------ccHHHHHHHHHhCCCcEEEEEe
Confidence 445 9999999999999999987652 3456777888899988776544
No 83
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.33 E-value=8.5e-13 Score=129.09 Aligned_cols=144 Identities=15% Similarity=0.129 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEe
Q 008748 132 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVL 208 (555)
Q Consensus 132 a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~ 208 (555)
...+.+.+...+. ....+|||||||+|.++..|++. .++++|+++.++..+.. .+...+.++.+.++
T Consensus 46 ~~~~~~~l~~~~~---------~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~ 115 (236)
T 1zx0_A 46 ETPYMHALAAAAS---------SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKG 115 (236)
T ss_dssp GHHHHHHHHHHHT---------TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEES
T ss_pred HHHHHHHHHhhcC---------CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEec
Confidence 3445555555543 22358999999999999999864 67888888887766553 33333567889999
Q ss_pred CCCCC--CCCCCCccEEEe-cccc-cc--cccchHHHHHHHHhhcCCCcEEEEEcCCCC-----CCChhhHHHH-HHHHH
Q 008748 209 GTKRL--PYPSRSFELAHC-SRCR-ID--WLQRDGILLLELDRLLRPGGYFVYSSPEAY-----AHDPENRRIW-NAMYD 276 (555)
Q Consensus 209 d~~~L--p~~d~sFDlVv~-s~~~-l~--~~~d~~~~L~el~RvLkPGG~lvis~P~~~-----~~~~e~~~~~-~~l~~ 276 (555)
|...+ ++++++||+|++ .+.. .+ +..+...+++++.|+|||||+|++.....+ .........+ +....
T Consensus 116 d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (236)
T 1zx0_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVP 195 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHH
T ss_pred CHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHH
Confidence 98887 888899999998 4421 11 112234679999999999999998653210 0001111222 23456
Q ss_pred HHHhcCcEE
Q 008748 277 LLKSMCWKI 285 (555)
Q Consensus 277 l~~~~gw~v 285 (555)
.+.+.||..
T Consensus 196 ~l~~aGF~~ 204 (236)
T 1zx0_A 196 ALLEAGFRR 204 (236)
T ss_dssp HHHHTTCCG
T ss_pred HHHHCCCCC
Confidence 678899974
No 84
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=2.7e-11 Score=111.93 Aligned_cols=139 Identities=11% Similarity=0.047 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEe
Q 008748 132 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVL 208 (555)
Q Consensus 132 a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~ 208 (555)
.....+.+.+.+.. .+..+|||+|||+|.++..+++. .++++|+++.++..+..+.. ..+ .++.+..+
T Consensus 20 ~~~~~~~~~~~~~~--------~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~ 90 (183)
T 2yxd_A 20 KEEIRAVSIGKLNL--------NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLA-KFNIKNCQIIKG 90 (183)
T ss_dssp CHHHHHHHHHHHCC--------CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHH-HTTCCSEEEEES
T ss_pred HHHHHHHHHHHcCC--------CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHH-HcCCCcEEEEEC
Confidence 34455556666543 23458999999999999999863 68899998888766664433 333 46888888
Q ss_pred CCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEE
Q 008748 209 GTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 209 d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~ 288 (555)
|... ++++++||+|++... .+...++.++.++ |||.++++.+.. ....++.+.+++.||.+...
T Consensus 91 d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 91 RAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVL--------ENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp CHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEE
T ss_pred Cccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccc--------ccHHHHHHHHHHcCCeEEEE
Confidence 8766 666678999998874 5567899999999 999999988653 34567888899999977765
Q ss_pred eeceEEe
Q 008748 289 KDQTVIW 295 (555)
Q Consensus 289 ~~~~~iw 295 (555)
+.....+
T Consensus 155 ~~~~~~~ 161 (183)
T 2yxd_A 155 NVFISYA 161 (183)
T ss_dssp EEEEEEE
T ss_pred Eeeeehh
Confidence 5443333
No 85
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.31 E-value=1.6e-11 Score=113.46 Aligned_cols=119 Identities=13% Similarity=0.101 Sum_probs=87.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCC-CCCCCCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGT-KRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~-~~Lp~~d~sFDlVv~s~~ 228 (555)
..+|||+|||+|.++..++.. .++++|+++.++..+..+. .+.+. ++ +...|. ..++..+++||+|++..
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~- 102 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNA-INLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG- 102 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHH-HTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHH-HHhCCCCCE-EEecchHhhhhccCCCCCEEEECC-
Confidence 458999999999999998864 5888888888776655333 33343 45 666775 34444337899999887
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.+++ ..+++++.++|+|||++++..... .....+..++++.++++....
T Consensus 103 ~~~~----~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 103 GLTA----PGVFAAAWKRLPVGGRLVANAVTV--------ESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp -TTC----TTHHHHHHHTCCTTCEEEEEECSH--------HHHHHHHHHHHHHCCEEEEEE
T ss_pred cccH----HHHHHHHHHhcCCCCEEEEEeecc--------ccHHHHHHHHHHcCCeeEEEE
Confidence 4555 568999999999999999987542 334567778888888776543
No 86
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.31 E-value=3.9e-12 Score=128.11 Aligned_cols=136 Identities=15% Similarity=0.157 Sum_probs=91.5
Q ss_pred CCCEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHHHHHHH----------------HHcC--------------C
Q 008748 155 NIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFA----------------LERG--------------I 201 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a~i~~A----------------~~rg--------------~ 201 (555)
+..+|||||||+|.++..++. ..|+++|+++.++..+..... ...+ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 346899999999996554443 378999999888865543211 0011 0
Q ss_pred CeEEEEeCCCC-CCC-----CCCCccEEEeccccccc----ccchHHHHHHHHhhcCCCcEEEEEcCCC---CCCChh--
Q 008748 202 PSTLGVLGTKR-LPY-----PSRSFELAHCSRCRIDW----LQRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPE-- 266 (555)
Q Consensus 202 ~v~~~~~d~~~-Lp~-----~d~sFDlVv~s~~~l~~----~~d~~~~L~el~RvLkPGG~lvis~P~~---~~~~~e-- 266 (555)
.+.+..+|+.. +|+ ++++||+|+|+. +++| .++...+|+++.|+|||||+|+++.... +.....
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAF-CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehh-hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 14566778776 664 346799999988 5888 6677889999999999999999964110 000000
Q ss_pred --hHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 267 --NRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 267 --~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
..-.-+++.+++++.||+++.....
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 0001347788999999998876543
No 87
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.30 E-value=1.3e-11 Score=119.48 Aligned_cols=125 Identities=14% Similarity=0.072 Sum_probs=93.2
Q ss_pred CCEEEEECCC-CcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC-CCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCG-VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCG-tG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L-p~~d~sFDlVv~s~~~l 230 (555)
..+|||+||| +|.++..++.. .|+++|+++.++..+..+ +...+.++.+.++|...+ ++++++||+|+++.. .
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp-~ 133 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRN-IERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP-Y 133 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHH-HHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC-C
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHH-HHHhCCCcEEEeCCchhhhhcccCceeEEEECCC-C
Confidence 4689999999 99999988763 688999999888766644 344455889999996433 456789999997642 2
Q ss_pred cccc-------------------chHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 231 DWLQ-------------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 231 ~~~~-------------------d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
++.. ....++.++.++|||||++++..|... ....++.+++++.||.+...+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------HHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------hHHHHHHHHHHHcCCceEEEE
Confidence 2211 136789999999999999999876531 345678888999999776543
No 88
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.30 E-value=7.9e-12 Score=122.77 Aligned_cols=124 Identities=11% Similarity=0.059 Sum_probs=93.0
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCC---CCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP---SRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~---d~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..|+. ..|+++|+++.++..+..+.......++.+..+|+..++++ +++||+|+|..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA- 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC-
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec-
Confidence 46899999999999988883 36889999998887666443333223689999998777754 57899999765
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
..+...++.++.++|+|||++++...... .....++.+.++..||.+.....
T Consensus 150 ----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~------~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 150 ----VARLSVLSELCLPLVKKNGLFVALKAASA------EEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp ----CSCHHHHHHHHGGGEEEEEEEEEEECC-C------HHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc------hHHHHHHHHHHHHcCCeEeEEEE
Confidence 25568899999999999999998643221 12345677788999998876543
No 89
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.30 E-value=4.9e-12 Score=126.94 Aligned_cols=99 Identities=15% Similarity=0.255 Sum_probs=81.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..|++. .|+++|+++.++..+... +...+.++.+..+|+..+++ +++||+|+|+. +++|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~-~~~~~ 197 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNET-KEKENLNISTALYDINAANI-QENYDFIVSTV-VFMFL 197 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCGGGCCC-CSCEEEEEECS-SGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHHcCCceEEEEeccccccc-cCCccEEEEcc-chhhC
Confidence 358999999999999999875 688999998888666643 34445689999999988887 68999999887 68877
Q ss_pred cch--HHHHHHHHhhcCCCcEEEEEc
Q 008748 234 QRD--GILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 234 ~d~--~~~L~el~RvLkPGG~lvis~ 257 (555)
.+. ..++.++.++|+|||+++++.
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 544 479999999999999988765
No 90
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.30 E-value=7.3e-12 Score=122.85 Aligned_cols=102 Identities=20% Similarity=0.332 Sum_probs=82.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..|++. .++++|+++.++..+..+ +...+.++.+.++|+..++++ ++||+|+|..+.+++.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 119 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRK-AKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF 119 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGS
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcC
Confidence 468999999999999999864 688899988888666643 344466789999999888876 6899999875455554
Q ss_pred --cchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 234 --QRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 234 --~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
.+...++.++.++|+|||.+++..|.
T Consensus 120 ~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 34567999999999999999997765
No 91
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.29 E-value=6.6e-12 Score=118.73 Aligned_cols=133 Identities=13% Similarity=0.076 Sum_probs=89.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCC-CCCCCccEEEecc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLP-YPSRSFELAHCSR 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp-~~d~sFDlVv~s~ 227 (555)
..+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+ .++.+..+|+..++ +.+++||+|++..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKL-TDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHH-HHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 358999999999999988763 6889999998887766443 3333 36889999987775 5668999999875
Q ss_pred ccccc--------ccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 228 CRIDW--------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 228 ~~l~~--------~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
..+.. ..+...++.++.++|||||+++++.........+......+....+...+|.+...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~ 171 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTD 171 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 32221 113356999999999999999998744321112122222222223344567766443
No 92
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.29 E-value=6.4e-12 Score=118.51 Aligned_cols=135 Identities=14% Similarity=0.064 Sum_probs=93.0
Q ss_pred eeeeCCCCCCCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHH
Q 008748 118 KINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQ 194 (555)
Q Consensus 118 ~~~F~~~g~~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~ 194 (555)
.+..+. ..+.+..+...+.+.+.+.... ..+..+|||+|||+|.++..++.. .|+++|+++.++..++.+
T Consensus 14 ~l~~~~--~~~rp~~~~~~~~l~~~l~~~~-----~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 86 (189)
T 3p9n_A 14 RIAVPP--RGTRPTTDRVRESLFNIVTARR-----DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARN 86 (189)
T ss_dssp EEECCS--CCC---CHHHHHHHHHHHHHHS-----CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHH
T ss_pred EecCCC--CCCccCcHHHHHHHHHHHHhcc-----CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHH
Confidence 344444 2344444555555555553210 023468999999999999977653 589999999988777755
Q ss_pred HHHHcCCCeEEEEeCCCCCC--CCCCCccEEEecccccccc-cchHHHHHHHHh--hcCCCcEEEEEcCCC
Q 008748 195 FALERGIPSTLGVLGTKRLP--YPSRSFELAHCSRCRIDWL-QRDGILLLELDR--LLRPGGYFVYSSPEA 260 (555)
Q Consensus 195 ~A~~rg~~v~~~~~d~~~Lp--~~d~sFDlVv~s~~~l~~~-~d~~~~L~el~R--vLkPGG~lvis~P~~ 260 (555)
.......++.+.++|+..++ +++++||+|++.. ..++. ++...++.++.+ +|+|||.+++..+..
T Consensus 87 ~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~-p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 87 IEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP-PYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC-CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred HHHcCCCceEEEEccHHHHHhhccCCCccEEEECC-CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 44433347899999976653 4468899999876 35553 566789999999 999999999987553
No 93
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.29 E-value=6.2e-12 Score=122.25 Aligned_cols=117 Identities=22% Similarity=0.348 Sum_probs=89.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCC-CCCCCC-CCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLPYP-SRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~-~~Lp~~-d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..|++. .|+++|+++.++ +.++++..++.+.++|. ..+|++ +++||+|+|+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELL-----KLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHH-----HHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHH-----HHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 368999999999999999975 566777666554 55555567899999998 678888 89999999762
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEeeceE
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQTV 293 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~~~ 293 (555)
+...++.++.++|||||.++...... . ...+.+.+++.||..+.......
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~~~~~--~-------~~~~~~~l~~~Gf~~~~~~~~~~ 169 (226)
T 3m33_A 120 ---GPTSVILRLPELAAPDAHFLYVGPRL--N-------VPEVPERLAAVGWDIVAEDHVSV 169 (226)
T ss_dssp ---CCSGGGGGHHHHEEEEEEEEEEESSS--C-------CTHHHHHHHHTTCEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCcEEEEeCCcC--C-------HHHHHHHHHHCCCeEEEEEeeee
Confidence 45668999999999999999332211 1 13567888999999887665543
No 94
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.29 E-value=7.6e-12 Score=120.39 Aligned_cols=134 Identities=17% Similarity=0.129 Sum_probs=94.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH----HcC-CCeEEEEeCCCCCCCCCCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL----ERG-IPSTLGVLGTKRLPYPSRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~----~rg-~~v~~~~~d~~~Lp~~d~sFDlVv~s 226 (555)
..+|||||||+|.++..|++. .|+++|+++.++.... +.|+ ..+ .++.+.++|+..+|+++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 458999999999999999864 6999999998886543 2222 223 3689999999999998776 777632
Q ss_pred c--ccc--ccccchHHHHHHHHhhcCCCcEEEEEcCCCC--------CCCh--hhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 227 R--CRI--DWLQRDGILLLELDRLLRPGGYFVYSSPEAY--------AHDP--ENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 227 ~--~~l--~~~~d~~~~L~el~RvLkPGG~lvis~P~~~--------~~~~--e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
. +.+ ++.+++..+++++.|+|||||.++++..... ...+ .....-+.+..++++.||++......
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 2 122 2667778899999999999999999642210 0000 11112235888999999998876543
No 95
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=9.9e-12 Score=116.01 Aligned_cols=115 Identities=12% Similarity=0.023 Sum_probs=87.6
Q ss_pred CEEEEECCCCcHHHHHHhcC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 235 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~-~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d 235 (555)
.+|||+|||+|.++..|++. .|+++|+++.++.. ..++.+.++|+.. ++++++||+|+++. .+++..+
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~-~~~~~~~ 93 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNP-PYVPDTD 93 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECC-CCBTTCC
T ss_pred CeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECC-CCccCCc
Confidence 58999999999999999876 57777777665532 4567889999876 66668999999876 4554333
Q ss_pred h---------HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 236 D---------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 236 ~---------~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
. ..++.++.+.| |||.++++.+.. ...+++.+++++.||+.+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEEEee
Confidence 2 56889999999 999999977543 12356788899999988765554
No 96
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.28 E-value=1.2e-11 Score=119.80 Aligned_cols=130 Identities=14% Similarity=0.123 Sum_probs=85.5
Q ss_pred CCCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCC----CCCCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~----Lp~~d~sFDlVv~s 226 (555)
++.+|||+|||+|.++..|++ ..|+++|+++.++.. +.+.|+++ .++.+.++|+.. .++. ++||+|+|.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~-~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEK-LLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHH-HHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHH-HHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 346899999999999988875 368999999987643 33455544 467777788765 3555 789999976
Q ss_pred ccccccccchHHHHHHHHhhcCCCcEEEEEcCCCC-CCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 227 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 227 ~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~-~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
. .+ ......++.++.|+|||||+|+++.+..- .......+.+.+..+.+++. |++++....
T Consensus 134 ~--~~-~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 134 I--AQ-KNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp C--CS-TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred c--cC-hhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 3 22 22334469999999999999999853310 00111112332222236666 988876554
No 97
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.26 E-value=5.8e-12 Score=122.87 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=88.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC-C--CCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-P--YPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L-p--~~d~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..|++. .|+|+|+++.++..+..+.......++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~- 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF- 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES-
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC-
Confidence 458999999999999999853 5899999999887776444333334689999997664 3 6789999999875
Q ss_pred ccccccch--------HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CcEEE
Q 008748 229 RIDWLQRD--------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 286 (555)
Q Consensus 229 ~l~~~~d~--------~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-gw~vv 286 (555)
...|.... ..++.++.|+|||||+|++++... ...+.+..++... +|+.+
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~--------~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE--------PYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHTSTTEEEC
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHhCCCcccc
Confidence 34444322 259999999999999999987542 2234455555543 56544
No 98
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.26 E-value=7.4e-12 Score=127.67 Aligned_cols=104 Identities=18% Similarity=0.327 Sum_probs=82.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHH-------cCCCeEEEEeCCCCCC----CC--CCC
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE-------RGIPSTLGVLGTKRLP----YP--SRS 219 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~-------rg~~v~~~~~d~~~Lp----~~--d~s 219 (555)
..+|||||||+|.++..+++. .++++|+++.++..+..+.... ...++.+.++|+..++ ++ +++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 458999999999999988853 6889999988887666544332 2235789999988876 53 458
Q ss_pred ccEEEecccccccc-c---chHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 220 FELAHCSRCRIDWL-Q---RDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 220 FDlVv~s~~~l~~~-~---d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
||+|+|+. ++||. . +...++.++.++|||||+|++++|..
T Consensus 115 fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 115 FDICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp EEEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred EEEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 99999988 68887 3 34679999999999999999998763
No 99
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.25 E-value=5.6e-12 Score=124.08 Aligned_cols=135 Identities=15% Similarity=0.162 Sum_probs=94.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC------------------------------
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI------------------------------ 201 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~------------------------------ 201 (555)
+..+|||||||+|.++..++.. .|+++|+++.++..+..... ..+.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLK-KEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHT-TCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHh-cCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 3468999999999999888764 67888888887765543321 1110
Q ss_pred Ce-EEEEeCCCCCC-CCC---CCccEEEecccccc----cccchHHHHHHHHhhcCCCcEEEEEcCCCCCC---Chh--h
Q 008748 202 PS-TLGVLGTKRLP-YPS---RSFELAHCSRCRID----WLQRDGILLLELDRLLRPGGYFVYSSPEAYAH---DPE--N 267 (555)
Q Consensus 202 ~v-~~~~~d~~~Lp-~~d---~sFDlVv~s~~~l~----~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~---~~e--~ 267 (555)
.+ .+.++|+..++ +++ ++||+|+|.. +++ +..+...++.++.++|||||+|+++.+..... ... .
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTL-CLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhh-hhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 16 78889987654 355 8999999988 577 55567889999999999999999976431100 000 0
Q ss_pred --HHHHHHHHHHHHhcCcEEEEEeec
Q 008748 268 --RRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 268 --~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
.-.-+++.+++++.||+++.....
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEEEe
Confidence 001237788999999998876654
No 100
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.25 E-value=4.1e-11 Score=111.36 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEe
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVL 208 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~ 208 (555)
......+.+.+.. .+..+|||+|||+|.++..++.. .++++|+++..+..+..+.. ..+ ..+.+..+
T Consensus 19 ~~~~~~~~~~~~~--------~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~ 89 (192)
T 1l3i_A 19 MEVRCLIMCLAEP--------GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQ-RHGLGDNVTLMEG 89 (192)
T ss_dssp HHHHHHHHHHHCC--------CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HTTCCTTEEEEES
T ss_pred HHHHHHHHHhcCC--------CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHH-HcCCCcceEEEec
Confidence 4444455555542 23468999999999999999874 68888988887766654433 333 36788888
Q ss_pred CCCCCCCCC-CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEE
Q 008748 209 GTKRLPYPS-RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 209 d~~~Lp~~d-~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv 286 (555)
|... ++++ ++||+|++... ++ +...++.++.++|+|||.+++..+.. ....++.+++++.||.+.
T Consensus 90 d~~~-~~~~~~~~D~v~~~~~-~~---~~~~~l~~~~~~l~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 90 DAPE-ALCKIPDIDIAVVGGS-GG---ELQEILRIIKDKLKPGGRIIVTAILL--------ETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp CHHH-HHTTSCCEEEEEESCC-TT---CHHHHHHHHHHTEEEEEEEEEEECBH--------HHHHHHHHHHHHTTCCCE
T ss_pred CHHH-hcccCCCCCEEEECCc-hH---HHHHHHHHHHHhcCCCcEEEEEecCc--------chHHHHHHHHHHCCCceE
Confidence 8654 2232 58999998763 33 34779999999999999999987642 345677888899999443
No 101
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.24 E-value=1.4e-11 Score=122.52 Aligned_cols=126 Identities=13% Similarity=-0.001 Sum_probs=93.4
Q ss_pred CCCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCC---CCCccEEEecc
Q 008748 155 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP---SRSFELAHCSR 227 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~---d~sFDlVv~s~ 227 (555)
...+|||||||+|..+..|+. ..|+++|+++.++..+..+.......++.+..+|++.++.. +++||+|+|..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 356899999999999888874 36899999998887766444333223589999998777643 47899999754
Q ss_pred cccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 228 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
+ .+...++.++.++|||||+|++...... .+...++...++..||++......
T Consensus 160 -~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~------~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 160 -V----APLCVLSELLLPFLEVGGAAVAMKGPRV------EEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp -S----CCHHHHHHHHGGGEEEEEEEEEEECSCC------HHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred -c----CCHHHHHHHHHHHcCCCeEEEEEeCCCc------HHHHHHHHHHHHHcCCeEEEEEEe
Confidence 2 3457799999999999999998653311 134456777788899988765543
No 102
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=5.1e-11 Score=117.04 Aligned_cols=121 Identities=10% Similarity=0.091 Sum_probs=93.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHH-cCCCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~-rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
..+|||+|||+|.++..+++. .++++|+++..+..+..+.... ...++.+...|+...++++++||+|++.
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~--- 173 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD--- 173 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE---
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC---
Confidence 468999999999999888753 6889999888877666544433 2356889999988888888899999963
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
.+++..++.++.++|+|||++++..|.. ....++...+++.||..+....
T Consensus 174 ---~~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 174 ---LMEPWKVLEKAALALKPDRFLVAYLPNI--------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp ---SSCGGGGHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred ---CcCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceEEEEE
Confidence 2455678999999999999999988763 2345666777889998776544
No 103
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.23 E-value=2.1e-11 Score=120.26 Aligned_cols=122 Identities=16% Similarity=0.102 Sum_probs=86.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH-----c-CCCeEEEEeCCCC-CC--CCCCCccE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----R-GIPSTLGVLGTKR-LP--YPSRSFEL 222 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~-----r-g~~v~~~~~d~~~-Lp--~~d~sFDl 222 (555)
..+|||||||+|.++..|++. .++|+|+++.++..+..+.... . ..++.+..+|+.. ++ +++++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 358999999999999999864 5889999998887665443221 2 2468999999876 66 78899999
Q ss_pred EEecccccccccc--------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC-cEEE
Q 008748 223 AHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIV 286 (555)
Q Consensus 223 Vv~s~~~l~~~~d--------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g-w~vv 286 (555)
|++.+. ..|... ...++.++.++|||||.|++++... .....+.+.+...+ |..+
T Consensus 127 v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~--------~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 127 MFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL--------ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHTSTTEEEE
T ss_pred EEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCcccc
Confidence 987652 333221 1369999999999999999976542 23345556666665 5443
No 104
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.23 E-value=9e-11 Score=120.72 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=94.9
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
+..+|||||||+|.++..+++. .++++|+ +..+..+..... +.+ .++.+..+|+. .+++. +||+|++.+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFL-DTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA- 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTT-SCCCC-SCSEEEEES-
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhh-hcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh-
Confidence 4579999999999999998863 5778888 766655553333 333 46899999986 45554 799999988
Q ss_pred ccccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCCCh---hhHH----------HHHHHHHHHHhcCcEEEEEee
Q 008748 229 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDP---ENRR----------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 229 ~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~~~---e~~~----------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
++|+.+++ ..+++++.++|+|||++++..+......+ .+.. ..+++.+++++.||+++....
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 57777765 67999999999999999997754221100 0001 124788999999999886654
No 105
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.22 E-value=4e-11 Score=118.56 Aligned_cols=132 Identities=11% Similarity=0.088 Sum_probs=92.4
Q ss_pred CCCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCC---CCCCCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK---RLPYPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~---~Lp~~d~sFDlVv~s 226 (555)
++.+|||+|||+|.++..|++. .|+++|+++.++..+. +.+.+ ..++..+.+|.. ..++..+++|+|++.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~-~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRD-RRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTT-CTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHh-hcCeeEEEEeccCccccccccceEEEEEEe
Confidence 4469999999999999999863 5899999998886554 33333 246777777753 345667889999864
Q ss_pred ccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCC-CChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 227 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-HDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 227 ~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~-~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
+.+..+...++.++.++|||||+++++....-. ........+.+..+.+++.||++++..+.
T Consensus 155 ---~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 155 ---VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp ---CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 344566678999999999999999997532100 00000123455567788899998876543
No 106
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.22 E-value=1.4e-10 Score=121.44 Aligned_cols=132 Identities=11% Similarity=0.030 Sum_probs=95.6
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHc-CCCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~r-g~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..++++ .++++|+ +..+..+........ ..++.+..+|+. .+++. .||+|++.+ +
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~-v 277 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKH-V 277 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEES-C
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhh-h
Confidence 4579999999999999999864 5778888 766665554333222 246899999986 56665 799999988 5
Q ss_pred cccccchH--HHHHHHHhhcCCCcEEEEEcCCCCCC-Chh--h--HH----------HHHHHHHHHHhcCcEEEEEee
Q 008748 230 IDWLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPE--N--RR----------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 230 l~~~~d~~--~~L~el~RvLkPGG~lvis~P~~~~~-~~e--~--~~----------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
+|+.++.. .+|+++.++|+|||++++..+..... ... . .. ..+++.+++++.||+++....
T Consensus 278 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 278 LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 77777665 69999999999999999976432111 111 0 00 124788999999999887654
No 107
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.22 E-value=1.8e-11 Score=119.99 Aligned_cols=135 Identities=13% Similarity=0.068 Sum_probs=83.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCC-hhhhhHH---HHHHHHHcC-CCeEEEEeCCCCCCCC-CCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLA-PNDVHEN---QIQFALERG-IPSTLGVLGTKRLPYP-SRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis-~~dls~a---~i~~A~~rg-~~v~~~~~d~~~Lp~~-d~sFDlVv~ 225 (555)
..+|||||||+|.++..|+.. .|+|+|++ +.++..+ + +.+.+.+ .++.+..+|+..+|.. .+.+|.|++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~-~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKII-KKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHT-SCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 358999999999999999842 58899999 5444333 2 1222333 3588999999888632 134555554
Q ss_pred cccc----cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCC---------hhhHHHH-H--HHHHHHHhcCcEEEEEe
Q 008748 226 SRCR----IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD---------PENRRIW-N--AMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 226 s~~~----l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~---------~e~~~~~-~--~l~~l~~~~gw~vv~~~ 289 (555)
++.. .+...+...++.++.|+|||||+|+++........ +.....| . ++.+++++.||++...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVK 183 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeee
Confidence 3210 01112335689999999999999999332111000 0000111 1 48889999999988665
Q ss_pred ec
Q 008748 290 DQ 291 (555)
Q Consensus 290 ~~ 291 (555)
..
T Consensus 184 ~~ 185 (225)
T 3p2e_A 184 EL 185 (225)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 108
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.22 E-value=6.3e-11 Score=134.33 Aligned_cols=118 Identities=16% Similarity=0.269 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHH------cCC
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE------RGI 201 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~------rg~ 201 (555)
....+.+.+.+.. ..+.+|||||||+|.++..|++. .|+|+|+++.++..++.+.... ...
T Consensus 707 eqRle~LLelL~~--------~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~ 778 (950)
T 3htx_A 707 KQRVEYALKHIRE--------SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK 778 (950)
T ss_dssp HHHHHHHHHHHHH--------SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS
T ss_pred HHHHHHHHHHhcc--------cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC
Confidence 4445555555542 13468999999999999999864 4788888888887665443322 123
Q ss_pred CeEEEEeCCCCCCCCCCCccEEEecccccccccchH--HHHHHHHhhcCCCcEEEEEcCCC
Q 008748 202 PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDG--ILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 202 ~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~--~~L~el~RvLkPGG~lvis~P~~ 260 (555)
++.+.++|+..+++++++||+|+|.. +++|++++. .+++++.|+|||| .+++++|+.
T Consensus 779 nVefiqGDa~dLp~~d~sFDlVV~~e-VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 779 SATLYDGSILEFDSRLHDVDIGTCLE-VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEEEESCTTSCCTTSCSCCEEEEES-CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred ceEEEECchHhCCcccCCeeEEEEeC-chhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 58999999999999999999999987 688888765 4899999999999 888888753
No 109
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.22 E-value=2.5e-11 Score=118.33 Aligned_cols=130 Identities=12% Similarity=0.098 Sum_probs=89.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCC---CCCCCCCccEEEecc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---LPYPSRSFELAHCSR 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~---Lp~~d~sFDlVv~s~ 227 (555)
..+|||+|||+|.++..|++. .|+++|+++.++.... +.|+.+ .++.+..+|+.. +++.+++||+|++..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 468999999999999988753 6889999987664443 555554 678899999876 455668999999754
Q ss_pred cccccccchHHHHHHHHhhcCCCcEEEEEcCCCC-CCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 228 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~-~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
. .......++.++.++|||||+++++.+... .........+.+-.+++++.||+++....
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLT 216 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEe
Confidence 2 122224468899999999999999764310 01111112232225778899999886443
No 110
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.21 E-value=3.7e-11 Score=125.61 Aligned_cols=131 Identities=10% Similarity=0.111 Sum_probs=93.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCC--CCCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRL--PYPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~L--p~~d~sFDlVv~s 226 (555)
...+|||||||+|.++..++++ .++++|+ +.++..+..+ +.+.+ .++.+..+|+... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQ-TAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHH-HTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHH-HHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 3469999999999999999863 5778887 6665544422 22233 3589999998765 566 789999998
Q ss_pred ccccccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhH---------------------HHHHHHHHHHHhcCc
Q 008748 227 RCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENR---------------------RIWNAMYDLLKSMCW 283 (555)
Q Consensus 227 ~~~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~---------------------~~~~~l~~l~~~~gw 283 (555)
. ++|+..+. ..+|+++.++|||||++++..+.......... ...+++.+++++.||
T Consensus 256 ~-vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 256 Q-FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp S-CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred c-hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 8 57665554 46899999999999999997754321111100 013478889999999
Q ss_pred EEEEEe
Q 008748 284 KIVSKK 289 (555)
Q Consensus 284 ~vv~~~ 289 (555)
+++...
T Consensus 335 ~~v~~~ 340 (363)
T 3dp7_A 335 EVEEIQ 340 (363)
T ss_dssp EESCCC
T ss_pred eEEEEE
Confidence 887554
No 111
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.21 E-value=1.2e-11 Score=123.45 Aligned_cols=164 Identities=9% Similarity=-0.040 Sum_probs=102.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH--cCC--CeEEEEeCCCCC-------CCCCCCc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE--RGI--PSTLGVLGTKRL-------PYPSRSF 220 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~--rg~--~v~~~~~d~~~L-------p~~d~sF 220 (555)
..+|||+|||+|.++..|+++ .|+++|+++.++..+..+.... .+. ++.+..+|+..+ ++++++|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 458999999999999998864 5788888887775555433220 222 378999998776 3567899
Q ss_pred cEEEeccccc----------------cc-ccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCc
Q 008748 221 ELAHCSRCRI----------------DW-LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 283 (555)
Q Consensus 221 DlVv~s~~~l----------------~~-~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw 283 (555)
|+|+++.... +. ......++.++.++|||||+|++..+.. ...++...+++. |
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~-~ 186 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---------SVAEIIAACGSR-F 186 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---------GHHHHHHHHTTT-E
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---------HHHHHHHHHHhc-C
Confidence 9999862111 11 1224678999999999999999987652 133455666654 7
Q ss_pred EEEEEeeceEEeecCCCchhhhccCCC-----CCCCCCCC-CCCC-Ccccccc
Q 008748 284 KIVSKKDQTVIWAKPISNSCYLKRVPG-----SRPPLCSS-DDDP-DVTWNVL 329 (555)
Q Consensus 284 ~vv~~~~~~~iw~KPl~~~c~~~r~~~-----~~p~lc~~-~~~~-~~~wy~~ 329 (555)
..+..........++.+..+...++.+ ..|+++.. +++. ++.++..
T Consensus 187 ~~~~i~~v~~~~~~~~~~~lv~~~k~~~~~~~~~~~l~i~~~~~~~yt~~~~~ 239 (260)
T 2ozv_A 187 GGLEITLIHPRPGEDAVRMLVTAIKGSRARLTFRAPLIMHETGSHAFTPFVDD 239 (260)
T ss_dssp EEEEEEEEESSTTSCCCEEEEEEEETCCCCCEECCCEESSCTTCCSCCHHHHH
T ss_pred CceEEEEEcCCCCCCceEEEEEEEeCCCCCceecCCEEEECCCCCCCCHHHHH
Confidence 655444433222344444444444433 23556654 3334 4444443
No 112
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.20 E-value=2.9e-11 Score=121.38 Aligned_cols=120 Identities=9% Similarity=0.133 Sum_probs=91.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHc-C-CCeEEEEeCCCCCCCCCCCccEEEecc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-G-IPSTLGVLGTKRLPYPSRSFELAHCSR 227 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~r-g-~~v~~~~~d~~~Lp~~d~sFDlVv~s~ 227 (555)
+..+|||+|||+|.++..+++. .++++|+++..+..+..+.. .. + .++.+..+|+.. ++++++||+|++.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~- 186 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLS-EFYDIGNVRTSRSDIAD-FISDQMYDAVIAD- 186 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHH-TTSCCTTEEEECSCTTT-CCCSCCEEEEEEC-
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHH-hcCCCCcEEEEECchhc-cCcCCCccEEEEc-
Confidence 3468999999999999888753 68899998887766654433 22 3 468888888876 6667889999962
Q ss_pred cccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 228 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
.+++..++.++.++|||||+++++++.. ....++.+.+++.||..+....
T Consensus 187 -----~~~~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 187 -----IPDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp -----CSCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEEEE
T ss_pred -----CcCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCeEEEEEE
Confidence 3456779999999999999999998763 2345667778889998776544
No 113
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.20 E-value=9.6e-11 Score=118.19 Aligned_cols=154 Identities=12% Similarity=0.094 Sum_probs=105.6
Q ss_pred CceeeeCCCCCCCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHH
Q 008748 116 GEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQ 192 (555)
Q Consensus 116 ~e~~~F~~~g~~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~ 192 (555)
+-++.+.-....|..........+.+.+. +..+|||+|||+|.++..++.. .|+++|+++.++..+.
T Consensus 96 g~~f~~d~~~~~f~~~~~~~~~~l~~~~~----------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~ 165 (278)
T 2frn_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV 165 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHH
T ss_pred CEEEEEEccceeEcCCcHHHHHHHHHhCC----------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 33444433334455554444445555432 2358999999999999999863 4899999999887777
Q ss_pred HHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHH
Q 008748 193 IQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRI 270 (555)
Q Consensus 193 i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~ 270 (555)
.+.. ..+. .+.+..+|+..++. +++||+|++... .....++.++.++|||||++++.+....... ....
T Consensus 166 ~n~~-~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~ 236 (278)
T 2frn_A 166 ENIH-LNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--PREP 236 (278)
T ss_dssp HHHH-HTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTTT
T ss_pred HHHH-HcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc--cccH
Confidence 5443 3343 37899999888876 678999997531 2335689999999999999999764321000 0123
Q ss_pred HHHHHHHHHhcCcEEEEE
Q 008748 271 WNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 271 ~~~l~~l~~~~gw~vv~~ 288 (555)
.+.+.+.+++.||.+...
T Consensus 237 ~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 237 FETFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCeeEEe
Confidence 457788899999987653
No 114
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.20 E-value=2.6e-10 Score=116.30 Aligned_cols=124 Identities=10% Similarity=0.139 Sum_probs=84.6
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEE-EeCCCCCC---CCCCCccEEEecc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP---YPSRSFELAHCSR 227 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~-~~d~~~Lp---~~d~sFDlVv~s~ 227 (555)
...+|||||||||.++..|++. .|+++|+++.|+..+. +....+... ..++..++ ++..+||+|+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~-----r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKL-----RQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHH-----HTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHH-----HhCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 3468999999999999988864 6899999999886532 223333322 23333333 3445699999865
Q ss_pred cccccccchHHHHHHHHhhcCCCcEEEEEcCCCCC------------CChhhH-HHHHHHHHHHHhcCcEEEE
Q 008748 228 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA------------HDPENR-RIWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~------------~~~e~~-~~~~~l~~l~~~~gw~vv~ 287 (555)
+ ++ +...+|.++.|+|||||.+++...+.+. +++... ..-.++.+++...||.+..
T Consensus 160 s-f~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 160 S-FI---SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp S-SS---CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred e-Hh---hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3 43 2367899999999999999987433221 112222 2445788899999998764
No 115
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=1.2e-11 Score=120.88 Aligned_cols=100 Identities=11% Similarity=0.092 Sum_probs=77.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCC-----CCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS-----RSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d-----~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..|++. .|+++|+++.++..+..+. ...++.+.++|+..+++.. ..||+|++..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~- 132 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT- 132 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES-
T ss_pred CCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEcc-
Confidence 357999999999999999874 6888888877665444222 2347889999988765432 2489999887
Q ss_pred cccccc--chHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 229 RIDWLQ--RDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 229 ~l~~~~--d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++++.+ +...+++++.++|||||+++++...
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 688887 6688999999999999999887654
No 116
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.20 E-value=1.1e-10 Score=119.48 Aligned_cols=131 Identities=12% Similarity=0.168 Sum_probs=94.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
..+|||||||+|.++..+++. .++++|++ ..+..+..+... .+. ++.+..+|+...+++++ ||+|++.+ +
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~-~ 241 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARI-QGVASRYHTIAGSAFEVDYGND-YDLVLLPN-F 241 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHH-HTCGGGEEEEESCTTTSCCCSC-EEEEEEES-C
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHh-cCCCcceEEEecccccCCCCCC-CcEEEEcc-h
Confidence 469999999999999998864 57788887 666555543332 232 48999999887777754 99999988 5
Q ss_pred cccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCC--ChhhHH----------------HHHHHHHHHHhcCcEEEEEe
Q 008748 230 IDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH--DPENRR----------------IWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 230 l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~--~~e~~~----------------~~~~l~~l~~~~gw~vv~~~ 289 (555)
+|+..+. ..+++++.++|+|||++++..+..... ...... ..+++.+++++.||+.+...
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 7776443 679999999999999999987543211 111100 13477889999999888654
Q ss_pred e
Q 008748 290 D 290 (555)
Q Consensus 290 ~ 290 (555)
.
T Consensus 322 ~ 322 (335)
T 2r3s_A 322 S 322 (335)
T ss_dssp C
T ss_pred E
Confidence 3
No 117
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=2.8e-11 Score=120.45 Aligned_cols=121 Identities=12% Similarity=0.143 Sum_probs=91.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..+++. .|+++|+++.++..+..+. ...+..+.+..+|.... +++++||+|+++. ..+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~-~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~-~~~-- 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANA-KRNGVRPRFLEGSLEAA-LPFGPFDLLVANL-YAE-- 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHH-HHTTCCCEEEESCHHHH-GGGCCEEEEEEEC-CHH--
T ss_pred CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHH-HHcCCcEEEEECChhhc-CcCCCCCEEEECC-cHH--
Confidence 368999999999999888764 6899999999887776444 34444478888776542 4457899999765 233
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
....++.++.++|+|||+++++.... ...+++.+.+++.||+++....
T Consensus 196 -~~~~~l~~~~~~LkpgG~lils~~~~--------~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 196 -LHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp -HHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEEE
T ss_pred -HHHHHHHHHHHHcCCCCEEEEEeecc--------CCHHHHHHHHHHCCCEEEEEec
Confidence 23578999999999999999976432 1245778889999999886654
No 118
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.20 E-value=7.2e-11 Score=115.12 Aligned_cols=126 Identities=16% Similarity=0.174 Sum_probs=88.1
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCC----CCCCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~----Lp~~d~sFDlVv~s 226 (555)
+..+|||+|||+|.++..|++. .|+++|+++.++..+.. .+... .++.+..+|+.. +++. ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLD-ACAER-ENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHH-HTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHH-HhhcC-CCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 3468999999999999988853 58889988877755542 23222 578888899887 7776 789999832
Q ss_pred ccccccccch---HHHHHHHHhhcCCCcEEEEEcCC-CCCCChhhHHHH-HHHHHHHHhcCcEEEEEee
Q 008748 227 RCRIDWLQRD---GILLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 227 ~~~l~~~~d~---~~~L~el~RvLkPGG~lvis~P~-~~~~~~e~~~~~-~~l~~l~~~~gw~vv~~~~ 290 (555)
..++ ..++.++.++|||||+++++... ...........+ +++. ++++.||+++....
T Consensus 151 ------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 151 ------VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp ------CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred ------cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 2334 66899999999999999996321 101111111223 4666 88899998876654
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.19 E-value=5.9e-11 Score=121.21 Aligned_cols=100 Identities=7% Similarity=0.039 Sum_probs=78.0
Q ss_pred CCCCEEEEECCCCcHHHHH-Hhc---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 154 GNIRNVLDVGCGVASFGAY-LLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 154 ~~~~~VLDIGCGtG~~a~~-La~---~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
.++.+|||||||+|.++.. +++ ..|+++|+++.++..++...+.....++.+.++|+..++ +++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 3457999999999977644 333 479999999998877775544333357899999988776 689999997542
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
.++...+++++.|+|||||+|++....
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 467788999999999999999997643
No 120
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.19 E-value=8.3e-11 Score=122.59 Aligned_cols=131 Identities=20% Similarity=0.204 Sum_probs=92.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
+..+|||||||+|.++..+++. .++++|+ +.++..+..+.. ..+. ++.+..+|+.. +++. .||+|++.+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 256 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFA-DAGLADRVTVAEGDFFK-PLPV-TADVVLLSF- 256 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSC-CEEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-cCCC-CCCEEEEec-
Confidence 4569999999999999998863 5778888 777665554333 3333 58999999754 4443 499999988
Q ss_pred ccccccchH--HHHHHHHhhcCCCcEEEEEcC--CCCCCC-hhhH---H------------HHHHHHHHHHhcCcEEEEE
Q 008748 229 RIDWLQRDG--ILLLELDRLLRPGGYFVYSSP--EAYAHD-PENR---R------------IWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 229 ~l~~~~d~~--~~L~el~RvLkPGG~lvis~P--~~~~~~-~e~~---~------------~~~~l~~l~~~~gw~vv~~ 288 (555)
++|+..+.. .+++++.++|+|||++++..+ ...... .... . ..+++.+++++.||+++..
T Consensus 257 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 577776654 799999999999999999776 311110 0000 0 1236788999999998866
Q ss_pred ee
Q 008748 289 KD 290 (555)
Q Consensus 289 ~~ 290 (555)
..
T Consensus 337 ~~ 338 (374)
T 1qzz_A 337 RT 338 (374)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 121
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.18 E-value=4.8e-11 Score=108.92 Aligned_cols=93 Identities=17% Similarity=0.173 Sum_probs=74.1
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC--------CCCCCccE
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFEL 222 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp--------~~d~sFDl 222 (555)
..+|||+|||+|.++..+++ ..++++|+++ ++.. .++.+..+|...++ +++++||+
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 45899999999999988874 3688899888 5421 46788889988776 77789999
Q ss_pred EEecccccccccch-----------HHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 223 AHCSRCRIDWLQRD-----------GILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 223 Vv~s~~~l~~~~d~-----------~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
|++.. .+++..+. ..++.++.++|+|||.++++.+..
T Consensus 92 i~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 92 VMSDM-APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp EEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred EEECC-CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 99865 46655444 578999999999999999987653
No 122
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.18 E-value=3.4e-10 Score=116.28 Aligned_cols=130 Identities=17% Similarity=0.094 Sum_probs=94.7
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHc-CCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~r-g~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
.+|||||||+|.++..++++ .++++|+ +.++..+..+..... ..++.+..+|+.. +++ ++||+|++.. ++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~-vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSR-IIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEES-CGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEch-hcc
Confidence 69999999999999998853 5889999 888766664443222 3468999999766 565 6799999888 576
Q ss_pred cccchH--HHHHHHHhhcCCCcEEEEEcCCCCCC-ChhhHH---------------HHHHHHHHHHhcCcEEEEEee
Q 008748 232 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPENRR---------------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 232 ~~~d~~--~~L~el~RvLkPGG~lvis~P~~~~~-~~e~~~---------------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
+..+.. .+++++.++|+|||++++..+..... ...... ...++.+++++.||+++....
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 655554 79999999999999999986432111 010000 124778899999999876543
No 123
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.18 E-value=1.6e-11 Score=129.42 Aligned_cols=102 Identities=14% Similarity=0.226 Sum_probs=76.7
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC---CCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg---~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
.+|||+|||+|.++..+++. .|+++|+++.++..+..+...... .++.+...|... ++++++||+|+|+. .
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~np-p 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNP-P 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECC-C
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECC-C
Confidence 68999999999999999864 689999999888777655443321 247788888766 56678999999876 4
Q ss_pred cccc---cch--HHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 230 IDWL---QRD--GILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 230 l~~~---~d~--~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
+|+. .+. ..++.++.++|||||.++++.+..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 5532 111 358999999999999999987654
No 124
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=5.1e-11 Score=113.74 Aligned_cols=98 Identities=13% Similarity=0.020 Sum_probs=77.5
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
+..+|||||||+|.++..|++. .|+++|+++..+..+..+.......++.+..+|....+.++++||+|++.. .+++
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~-~~~~ 155 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTA-APPE 155 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESS-BCSS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEcc-chhh
Confidence 3468999999999999998863 688999998887666644433333468899999877766678999999887 4666
Q ss_pred ccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 233 LQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 233 ~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
..+ ++.++|||||+++++.+.
T Consensus 156 ~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 156 IPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCT------HHHHTEEEEEEEEEEECS
T ss_pred hhH------HHHHhcccCcEEEEEEcC
Confidence 543 689999999999998876
No 125
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.17 E-value=1.6e-10 Score=120.17 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=95.4
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..++++ .++++|+ +.++..+..+...... .++.+..+|+...++++. |+|++.. +
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~-v 265 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCR-I 265 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEES-C
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEec-h
Confidence 3569999999999999999863 6789999 8887766644433222 248999999888777643 9999988 5
Q ss_pred cccccc--hHHHHHHHHhhcCCCcEEEEEcCCCCCC-Chhh------------H------HHHHHHHHHHHhcCcEEEEE
Q 008748 230 IDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH-DPEN------------R------RIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 230 l~~~~d--~~~~L~el~RvLkPGG~lvis~P~~~~~-~~e~------------~------~~~~~l~~l~~~~gw~vv~~ 288 (555)
+|+.++ ...+++++.++|||||++++........ .+.. . ...+++.+++++.||+++..
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~ 345 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTM 345 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEE
Confidence 776665 5779999999999999998876321100 0000 0 12236778899999998866
Q ss_pred ee
Q 008748 289 KD 290 (555)
Q Consensus 289 ~~ 290 (555)
..
T Consensus 346 ~~ 347 (359)
T 1x19_A 346 VR 347 (359)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 126
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.16 E-value=1.5e-10 Score=119.74 Aligned_cols=130 Identities=10% Similarity=0.135 Sum_probs=93.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCC-CCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP-YPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp-~~d~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..++++ .++++|+ +..+..+.... .+.+. ++.+..+|+...+ +..+.||+|++.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~- 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTI-HAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND- 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHH-HHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES-
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHH-HhcCCCCceEEEeCCcccCcccCCCCccEEEEec-
Confidence 579999999999999999863 5778888 66665555333 33332 5889999987765 1335699999988
Q ss_pred ccccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCC--ChhhH----------------HHHHHHHHHHHhcCcEEEEE
Q 008748 229 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH--DPENR----------------RIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 229 ~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~--~~e~~----------------~~~~~l~~l~~~~gw~vv~~ 288 (555)
++|+.++. ..+++++.++|+|||++++..+..... .+... ....++.+++++.||+++..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 57777655 679999999999999999976322110 01000 01246889999999999874
No 127
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.16 E-value=7.5e-11 Score=116.31 Aligned_cols=121 Identities=13% Similarity=0.186 Sum_probs=76.9
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEE-eCC-----CCCC---CCCCCccE
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGV-LGT-----KRLP---YPSRSFEL 222 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~-~d~-----~~Lp---~~d~sFDl 222 (555)
...+|||||||+|.++..|++. .|+++|+++.++..+. ++...+.... .++ ..++ +...+||+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~ 111 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKI-----RSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDV 111 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHH-----HTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHH-----HhCccccccccceEEEeCHhHcCcCCCCEEEEEE
Confidence 3468999999999999998864 6889999998886533 3333222111 111 1121 22234554
Q ss_pred EEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCC------------Chhh-HHHHHHHHHHHHhcCcEEEEEe
Q 008748 223 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------DPEN-RRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 223 Vv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~------------~~e~-~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
++++. ..++.++.|+|||||.+++...+.+.. ++.. ....+++.+++++.||++....
T Consensus 112 v~~~l---------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 112 SFISL---------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSSCG---------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred EhhhH---------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 44321 568999999999999999874221111 1111 1244588899999999987544
No 128
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.16 E-value=1.3e-10 Score=108.13 Aligned_cols=113 Identities=17% Similarity=0.126 Sum_probs=83.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcCCCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCCC---CCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPY---PSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp~---~d~sFDlVv~s~~~l 230 (555)
++.+|||||||. + ++ |+++.+++.|+++. .++.+.++|+..+++ ++++||+|+|+. ++
T Consensus 12 ~g~~vL~~~~g~-----------v-~v-----D~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~-~l 73 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------S-PV-----EALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL-VP 73 (176)
T ss_dssp TTSEEEEEECTT-----------S-CH-----HHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC-ST
T ss_pred CCCEEEEecCCc-----------e-ee-----eCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC-hh
Confidence 346899999996 1 24 55566666666653 258899999988887 789999999887 68
Q ss_pred ccc-cchHHHHHHHHhhcCCCcEEEEEcCCCCCCC-hhhHHHHHHHHHHHHhcCcEEE
Q 008748 231 DWL-QRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 231 ~~~-~d~~~~L~el~RvLkPGG~lvis~P~~~~~~-~e~~~~~~~l~~l~~~~gw~vv 286 (555)
||. .+...++++++|+|||||+|++..|...... ........++.+.+++.|| +.
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 888 8889999999999999999999765321100 0000123577888999999 44
No 129
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.16 E-value=2.3e-10 Score=114.74 Aligned_cols=122 Identities=15% Similarity=0.094 Sum_probs=87.9
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccc---
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRC--- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~--- 228 (555)
..+|||+|||+|.++..++. ..++++|+++.++..+..+.......++.+..+|.... +++++||+|+++..
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYID 188 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCCC
Confidence 35899999999999999884 37899999998887776544333223588888887653 44578999998631
Q ss_pred ---------ccccc------------cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEE
Q 008748 229 ---------RIDWL------------QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 229 ---------~l~~~------------~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~ 287 (555)
+++|. .....++.++.++|+|||++++..+.. .-.++.+++++.||..+.
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~Gf~~v~ 259 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ---------QGEAVRQAFILAGYHDVE 259 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS---------CHHHHHHHHHHTTCTTCC
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch---------HHHHHHHHHHHCCCcEEE
Confidence 11221 233668999999999999999976542 124677788889996543
No 130
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.16 E-value=1.4e-10 Score=114.58 Aligned_cols=129 Identities=11% Similarity=0.090 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC---CCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp---~~d~sFDlVv~s 226 (555)
++.+|||+|||+|.++..+++. .|+++|+++.++.. .++.++++ .++.+.++|+.... ...++||+|++.
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~-l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE-LLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH-HHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH-HHHHhhhc-CCeEEEEcccccchhhhccccceEEEEec
Confidence 3469999999999999888853 69999999987643 33455554 57888899976532 124689999976
Q ss_pred ccccccccchHH-HHHHHHhhcCCCcEEEEEcCCCC---CCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 227 RCRIDWLQRDGI-LLLELDRLLRPGGYFVYSSPEAY---AHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 227 ~~~l~~~~d~~~-~L~el~RvLkPGG~lvis~P~~~---~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
. +. ++... ++..+.++|||||+|+++....- ...++ +.+.+....+++.||++++....
T Consensus 154 ~-a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~--e~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 154 I-AQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPK--EIYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp C-CC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSS--SSTTHHHHHHHHTTEEEEEEEEC
T ss_pred C-CC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHH--HHHHHHHHHHHHCCCEEEEEecc
Confidence 4 22 33333 45566779999999999864321 11111 12345566777889998876543
No 131
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.15 E-value=1.2e-10 Score=114.77 Aligned_cols=119 Identities=10% Similarity=0.118 Sum_probs=90.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCCC-eEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIP-STLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~~-v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
..+|||+|||+|.++..++.. .++++|+++..+..+..+.......+ +.+..+|+... +++++||+|++..
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL-- 170 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS--
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC--
Confidence 468999999999999888753 68899999888776664444332233 88888887654 6678899999642
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC--cEEEEEe
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC--WKIVSKK 289 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g--w~vv~~~ 289 (555)
+++..++.++.++|+|||.+++..|.. ....++.+.+++.| |..+...
T Consensus 171 ----~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 171 ----PQPERVVEHAAKALKPGGFFVAYTPCS--------NQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp ----SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHTGGGBSCCEEE
T ss_pred ----CCHHHHHHHHHHHcCCCCEEEEEECCH--------HHHHHHHHHHHHcCCCccccEEE
Confidence 355678999999999999999987763 34556777888888 8655433
No 132
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=1.3e-11 Score=128.08 Aligned_cols=100 Identities=17% Similarity=0.241 Sum_probs=78.3
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
.+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+....+...|....+ +++||+|+|+. .+|+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~-~~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL-AANGVEGEVFASNVFSEV--KGRFDMIISNP-PFHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTTTTC--CSCEEEEEECC-CCCS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCCEEEEccccccc--cCCeeEEEECC-Cccc
Confidence 48999999999999998753 6899999988887666443 344566777788875543 67899999877 4654
Q ss_pred -----ccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 233 -----LQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 233 -----~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
..+...++.++.++|||||.++++.+..
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 2445779999999999999999987654
No 133
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=1.2e-10 Score=120.91 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=77.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEeccc--
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC-- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~-- 228 (555)
..+|||||||+|.++..+++. .|+++|+++ ++..+. +.+...+ .++.+..+|+..+++++++||+|++...
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM-DIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH-HHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 468999999999999998864 688999996 665554 3333444 4689999999999988889999997542
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEE
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFV 254 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lv 254 (555)
.+.+..+...++.++.|+|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 24445566779999999999999998
No 134
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.13 E-value=1.3e-10 Score=120.54 Aligned_cols=128 Identities=12% Similarity=0.016 Sum_probs=87.5
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH--HcCCCeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL--ERGIPSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~--~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
+..+|||||||+|.++..++++ .++++|++.. +. . +.+. ....++.+..+|+. .+++ +||+|++..
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~-~~--~-~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~- 255 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEV-VA--R-HRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR- 255 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHH-HT--T-CCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES-
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHH-hh--c-ccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh-
Confidence 3569999999999999999863 4566666221 11 0 0001 11245889999985 3444 799999888
Q ss_pred ccccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCCChh----h--HH----------HHHHHHHHHHhcCcEEEEEee
Q 008748 229 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPE----N--RR----------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 229 ~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~~~e----~--~~----------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
++|+.++. ..+|+++.++|||||+|++........... . .. ..+++.+++++.||+++....
T Consensus 256 vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 256 ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 58777776 579999999999999999976432111000 0 00 124788999999999886654
No 135
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.13 E-value=9.3e-11 Score=122.22 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=78.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCC--eEEEEeCCCCCCCCCCCccEEEeccc--
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRC-- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~--v~~~~~d~~~Lp~~d~sFDlVv~s~~-- 228 (555)
..+|||||||+|.++..++++ .|+++|+++ ++..+. +.+...+.. +.+..+|+..+++++++||+|++...
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 368999999999999999875 689999994 665555 444444443 89999999999999899999998541
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEE
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVY 255 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvi 255 (555)
.+.+......++.++.|+|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 244556778899999999999999984
No 136
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.13 E-value=3.1e-10 Score=117.72 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=93.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
+..+|||||||+|.++..+++. .++++|+ +.++..+..+.. ..+. ++.+..+|+.. +++. .||+|++..
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 257 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLK-DEGLSDRVDVVEGDFFE-PLPR-KADAIILSF- 257 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSS-CEEEEEEES-
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-CCCC-CccEEEEcc-
Confidence 3469999999999999998863 4667777 766665554333 3333 68999999754 4443 499999888
Q ss_pred ccccccch--HHHHHHHHhhcCCCcEEEEEcCC-CC-CCChhh---HH------------HHHHHHHHHHhcCcEEEEEe
Q 008748 229 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPE-AY-AHDPEN---RR------------IWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 229 ~l~~~~d~--~~~L~el~RvLkPGG~lvis~P~-~~-~~~~e~---~~------------~~~~l~~l~~~~gw~vv~~~ 289 (555)
++|+.++. ..+++++.++|+|||++++..+. .. ...... .. ..+++.+++++.||+++...
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVR 337 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEE
Confidence 57766665 47999999999999999998765 21 111010 00 12478889999999988765
Q ss_pred ec
Q 008748 290 DQ 291 (555)
Q Consensus 290 ~~ 291 (555)
..
T Consensus 338 ~~ 339 (360)
T 1tw3_A 338 QL 339 (360)
T ss_dssp EE
T ss_pred eC
Confidence 43
No 137
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.12 E-value=1.8e-10 Score=116.13 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=78.7
Q ss_pred CCEEEEECCCC---cHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC-----------CCC
Q 008748 156 IRNVLDVGCGV---ASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----------YPS 217 (555)
Q Consensus 156 ~~~VLDIGCGt---G~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp-----------~~d 217 (555)
..+|||||||+ |.++..+.+ .+|+++|+++.++..++... ....++.+..+|+...+ ++.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALL--AKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH--TTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhc--CCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 46899999999 987766543 47899999988886665433 22356899999986421 233
Q ss_pred CCccEEEecccccccccc--hHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 218 RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 218 ~sFDlVv~s~~~l~~~~d--~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
.+||+|++.. ++||+++ ...+|+++.++|+|||+|+++....
T Consensus 156 ~~~d~v~~~~-vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVG-MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETT-TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEec-hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 4899999777 6998877 6789999999999999999987543
No 138
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.12 E-value=2.3e-10 Score=114.16 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=88.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHH-c--CCCeEEEEeCCCCCCCCCCCccEEEecc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE-R--GIPSTLGVLGTKRLPYPSRSFELAHCSR 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~-r--g~~v~~~~~d~~~Lp~~d~sFDlVv~s~ 227 (555)
..+|||+|||+|.++..|+.. .++++|+++..+..+..+.... . ..++.+..+|+...++++++||+|++..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM 179 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC
Confidence 458999999999999888752 6889999988887666554443 2 3568899999888888788999999732
Q ss_pred cccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHh-cCcEEEE
Q 008748 228 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIVS 287 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~-~gw~vv~ 287 (555)
.++..++.++.++|+|||++++..|.. ....++...+++ .+|....
T Consensus 180 ------~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 180 ------LAPWEVLDAVSRLLVAGGVLMVYVATV--------TQLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHHSSBCCCE
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcCCcE
Confidence 355678999999999999999988763 223344444444 7775443
No 139
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.12 E-value=1.5e-10 Score=110.12 Aligned_cols=116 Identities=13% Similarity=0.007 Sum_probs=84.4
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||+|||+|.++..++. ..++++|+++.++..+..+.. ..+. ++.+..+|+..++ ++++||+|++.. +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--~ 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQH-ELKLENIEPVQSRVEEFP-SEPPFDGVISRA--F 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HTTCSSEEEEECCTTTSC-CCSCEEEEECSC--S
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCeEEEecchhhCC-ccCCcCEEEEec--c
Confidence 35899999999999988885 368899999888766664433 3343 4888999987776 457899999653 2
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.+...++.++.++|+|||++++...... -+++..+++ ||+++...
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~~---------~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKGQMP---------EDEIALLPE--EYQVESVV 186 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEESSCC---------HHHHHTSCT--TEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeCCCc---------hHHHHHHhc--CCceeeee
Confidence 4457899999999999999999754321 123444443 89877543
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.11 E-value=5.3e-11 Score=114.01 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=76.5
Q ss_pred CEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC---CCeEEEEeCCCCCC--CCCCC-ccEEEecc
Q 008748 157 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLP--YPSRS-FELAHCSR 227 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg---~~v~~~~~d~~~Lp--~~d~s-FDlVv~s~ 227 (555)
.+|||+|||+|.++..++.+ .|+++|+++.++..+..+.. ..+ .++.+..+|+..+. +++++ ||+|++..
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQ-TLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH-HTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH-HhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 58999999999999886643 68999999988877765443 344 36889989876543 23678 99999876
Q ss_pred cccccccchHHHHHHH--HhhcCCCcEEEEEcCCC
Q 008748 228 CRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el--~RvLkPGG~lvis~P~~ 260 (555)
. ++ ..+...++.++ .|+|+|||.++++....
T Consensus 134 ~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 134 P-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp C-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred C-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3 33 34556788888 67899999999987653
No 141
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.11 E-value=9.4e-11 Score=124.45 Aligned_cols=123 Identities=13% Similarity=0.034 Sum_probs=90.1
Q ss_pred CCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc---C-CCccccCChhhhhHHHHHH------H
Q 008748 127 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---H-DIIAMSLAPNDVHENQIQF------A 196 (555)
Q Consensus 127 ~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~---~-~V~~vdis~~dls~a~i~~------A 196 (555)
.|..........+.+.+.. .+..+|||||||+|.++..++. . .++|+|+++.++..+..+. +
T Consensus 153 vYGEt~~~~i~~il~~l~l--------~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~ 224 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKM--------TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWM 224 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCC--------CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHhcCC--------CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 4455555566666666653 2346899999999999988874 2 4899999987776554332 2
Q ss_pred HHcC---CCeEEEEeCCCCCCCCC--CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 197 LERG---IPSTLGVLGTKRLPYPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 197 ~~rg---~~v~~~~~d~~~Lp~~d--~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
...+ .++.|.++|+..+++.+ ..||+|+++. .+ |.++....|.++.|+|||||.|+++.+.
T Consensus 225 ~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn-~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f 290 (438)
T 3uwp_A 225 KWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNN-FA-FGPEVDHQLKERFANMKEGGRIVSSKPF 290 (438)
T ss_dssp HHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECC-TT-CCHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred HHhCCCCCCeEEEECcccCCccccccCCccEEEEcc-cc-cCchHHHHHHHHHHcCCCCcEEEEeecc
Confidence 2223 46899999999988754 4799999765 33 4577788899999999999999987543
No 142
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.11 E-value=9.5e-11 Score=109.14 Aligned_cols=132 Identities=14% Similarity=0.061 Sum_probs=91.6
Q ss_pred eeeeCCCCCCCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHH
Q 008748 118 KINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQ 194 (555)
Q Consensus 118 ~~~F~~~g~~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~ 194 (555)
++.++.+ ..+.+..+.+.+.+.+.+... ....+|||+|||+|.++..++.. .|+++|+++.++..++.+
T Consensus 15 ~~~~~~~-~~~rp~~~~~~~~~~~~l~~~-------~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 86 (187)
T 2fhp_A 15 RLKALDG-DNTRPTTDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKEN 86 (187)
T ss_dssp BCCCCCC-CSSCCCCHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred cccCCCC-CCcCcCHHHHHHHHHHHHHhh-------cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH
Confidence 4444433 245566667777777766421 23468999999999999987753 689999999888776644
Q ss_pred HHHHcC--CCeEEEEeCCCCC----CCCCCCccEEEecccccccccchHHHHHHH--HhhcCCCcEEEEEcCCC
Q 008748 195 FALERG--IPSTLGVLGTKRL----PYPSRSFELAHCSRCRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 195 ~A~~rg--~~v~~~~~d~~~L----p~~d~sFDlVv~s~~~l~~~~d~~~~L~el--~RvLkPGG~lvis~P~~ 260 (555)
... .+ .++.+..+|+... ++.+++||+|++... ++ .......+..+ .++|+|||.+++..+..
T Consensus 87 ~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 87 IAI-TKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHH-HTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHH-hCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 433 33 3588888886552 223578999997753 22 34456677777 89999999999988664
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.10 E-value=1.5e-11 Score=116.72 Aligned_cols=137 Identities=12% Similarity=0.002 Sum_probs=79.9
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEe
Q 008748 133 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVL 208 (555)
Q Consensus 133 ~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~ 208 (555)
+.+.+.+.+.+.. ..+..+|||+|||+|.++..+++. .++++|+++.++..+..+.. ..+.++.+.++
T Consensus 15 ~~~~~~~~~~l~~-------~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~ 86 (215)
T 4dzr_A 15 EVLVEEAIRFLKR-------MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE-RFGAVVDWAAA 86 (215)
T ss_dssp HHHHHHHHHHHTT-------CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHH
T ss_pred HHHHHHHHHHhhh-------cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH-HhCCceEEEEc
Confidence 3445555555532 123468999999999999998864 68899998888766653332 22336677777
Q ss_pred CCCCCCCCC-----CCccEEEecccccccccc--------------------------hHHHHHHHHhhcCCCcE-EEEE
Q 008748 209 GTKRLPYPS-----RSFELAHCSRCRIDWLQR--------------------------DGILLLELDRLLRPGGY-FVYS 256 (555)
Q Consensus 209 d~~~Lp~~d-----~sFDlVv~s~~~l~~~~d--------------------------~~~~L~el~RvLkPGG~-lvis 256 (555)
|+.. ++++ ++||+|+++.. .+...+ ...+++++.++|||||+ +++.
T Consensus 87 d~~~-~~~~~~~~~~~fD~i~~npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 87 DGIE-WLIERAERGRPWHAIVSNPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHH-HHHHHHHTTCCBSEEEECCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred chHh-hhhhhhhccCcccEEEECCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 7655 5554 89999998532 111110 15688999999999999 6665
Q ss_pred cCCCCCCChhhHHHHHHHHHHHH--hcCcEEEEE
Q 008748 257 SPEAYAHDPENRRIWNAMYDLLK--SMCWKIVSK 288 (555)
Q Consensus 257 ~P~~~~~~~e~~~~~~~l~~l~~--~~gw~vv~~ 288 (555)
.+.. ....+.++++ +.||..+..
T Consensus 165 ~~~~---------~~~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 165 VGHN---------QADEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp CTTS---------CHHHHHHHTGGGGGGTEECCE
T ss_pred ECCc---------cHHHHHHHHHHhhcCCceEEE
Confidence 5432 1345677788 888866543
No 144
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=6.7e-10 Score=112.07 Aligned_cols=131 Identities=11% Similarity=0.081 Sum_probs=88.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccC-ChhhhhHHHHHHH----HHcC------CCeEEEEeCCCCCC--C----
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSL-APNDVHENQIQFA----LERG------IPSTLGVLGTKRLP--Y---- 215 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdi-s~~dls~a~i~~A----~~rg------~~v~~~~~d~~~Lp--~---- 215 (555)
..+|||||||+|.++..++.. .|+++|+ ++.++..++.+.. ...+ .++.+...+..... +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 159 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT 159 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc
Confidence 358999999999999888863 6899999 7888876664442 2222 24666655533321 1
Q ss_pred CCCCccEEEecccccccccchHHHHHHHHhhcC---C--CcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC-cEEEEEe
Q 008748 216 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLR---P--GGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIVSKK 289 (555)
Q Consensus 216 ~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLk---P--GG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g-w~vv~~~ 289 (555)
++++||+|+++. ++++.++...++.++.++|+ | ||.++++....... ......++...+++.| |++....
T Consensus 160 ~~~~fD~Ii~~d-vl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~---~~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 160 GLQRFQVVLLAD-LLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPH---LAERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp SCSSBSEEEEES-CCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEEEEE
T ss_pred cCCCCCEEEEeC-cccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc---cchhHHHHHHHHHhcCCEEEEEec
Confidence 357899999887 47777888899999999999 9 99877654331100 0111235666788899 9887654
Q ss_pred e
Q 008748 290 D 290 (555)
Q Consensus 290 ~ 290 (555)
.
T Consensus 236 ~ 236 (281)
T 3bzb_A 236 S 236 (281)
T ss_dssp C
T ss_pred c
Confidence 4
No 145
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.09 E-value=1.6e-10 Score=116.21 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=67.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCC-----CCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-----PSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~-----~d~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..|+++ .|+++|+++.++..++ ++.... +...+...++. .+++||+|+|+.
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar-----~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~- 118 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLA-----EALADR-CVTIDLLDITAEIPKELAGHFDFVLNDR- 118 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEES-
T ss_pred cCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHH-----HHHHhc-cceeeeeecccccccccCCCccEEEEhh-
Confidence 468999999999999999875 6778877776664443 332111 22233333332 247899999987
Q ss_pred ccccc--cchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 229 RIDWL--QRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 229 ~l~~~--~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+++|. ++...+++++.++| |||.++++.+.
T Consensus 119 ~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 119 LINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 46654 34466999999999 99999998765
No 146
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.07 E-value=6.4e-11 Score=108.56 Aligned_cols=123 Identities=19% Similarity=0.218 Sum_probs=85.5
Q ss_pred CCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEE
Q 008748 128 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTL 205 (555)
Q Consensus 128 f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~ 205 (555)
+........+.+.+.+... + .+..+|||+|||+|.++..+++. .++++|+++.++..+..+... .+.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~---~---~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~ 92 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLR---Y---PRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRR-TGLGARV 92 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHH---C---TTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHH-HTCCCEE
T ss_pred CCCCHHHHHHHHHHHHHhh---c---cCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHH-cCCceEE
Confidence 4555556666555555320 0 12358999999999999999864 488999998888766644433 3447888
Q ss_pred EEeCCCCC-C-C--CCCCccEEEecccccccccchHHHHHHHH--hhcCCCcEEEEEcCCC
Q 008748 206 GVLGTKRL-P-Y--PSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 260 (555)
Q Consensus 206 ~~~d~~~L-p-~--~d~sFDlVv~s~~~l~~~~d~~~~L~el~--RvLkPGG~lvis~P~~ 260 (555)
..+|+... + + ..++||+|++.. .++ .+...++..+. ++|+|||.++++.+..
T Consensus 93 ~~~d~~~~~~~~~~~~~~~D~i~~~~-~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 93 VALPVEVFLPEAKAQGERFTVAFMAP-PYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEEECC-CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EeccHHHHHHhhhccCCceEEEEECC-CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 88886552 2 1 124799999875 233 45556777777 9999999999988664
No 147
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.07 E-value=2.1e-10 Score=116.02 Aligned_cols=101 Identities=12% Similarity=0.206 Sum_probs=74.1
Q ss_pred CCEEEEECCCCcH----HHHHHhcC--------CCccccCChhhhhHHHHHHH--------------H-----H---cC-
Q 008748 156 IRNVLDVGCGVAS----FGAYLLSH--------DIIAMSLAPNDVHENQIQFA--------------L-----E---RG- 200 (555)
Q Consensus 156 ~~~VLDIGCGtG~----~a~~La~~--------~V~~vdis~~dls~a~i~~A--------------~-----~---rg- 200 (555)
..+|||+|||||. ++..|++. .|+|+|+++.++..|+...- + . .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3589999999997 55555532 57888888877766653210 0 0 00
Q ss_pred --------CCeEEEEeCCCCCCCC-CCCccEEEecccccccccch--HHHHHHHHhhcCCCcEEEEEc
Q 008748 201 --------IPSTLGVLGTKRLPYP-SRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 201 --------~~v~~~~~d~~~Lp~~-d~sFDlVv~s~~~l~~~~d~--~~~L~el~RvLkPGG~lvis~ 257 (555)
..+.|.+.|+...|++ .+.||+|+|.+ +++|.++. ..++.++.++|+|||+|++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crn-vliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN-VMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS-SGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECC-chHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 2478889998776665 57899999988 57777655 679999999999999999844
No 148
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.07 E-value=2.3e-10 Score=117.13 Aligned_cols=129 Identities=12% Similarity=0.150 Sum_probs=90.5
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH----HcCCCeEEEEeCCCCCCC--CCCCccEEE
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL----ERGIPSTLGVLGTKRLPY--PSRSFELAH 224 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~----~rg~~v~~~~~d~~~Lp~--~d~sFDlVv 224 (555)
++.+|||||||+|.++..+++. .|+++|+++..+..+...+.. ....++.+..+|...++. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 3469999999999999999864 688888888777665543321 113568899999766543 468899999
Q ss_pred ecccccccccch----HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEE
Q 008748 225 CSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 225 ~s~~~l~~~~d~----~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~ 288 (555)
+.. ..++.+.. ..+++++.++|||||.+++.....+.. ......+.+.+++.||..+..
T Consensus 175 ~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~GF~~v~~ 237 (304)
T 3bwc_A 175 IDT-TDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD----LELIEKMSRFIRETGFASVQY 237 (304)
T ss_dssp EEC-C---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHHHTCSEEEE
T ss_pred ECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc----hHHHHHHHHHHHhCCCCcEEE
Confidence 754 34433222 578999999999999999987654321 234567778889999976643
No 149
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.06 E-value=6.1e-10 Score=111.55 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=89.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
..+|||+|||+|.++..++.. .++++|+++..+..+..+.. ..+ .++.+..+|+... +++++||+|++..
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~- 189 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLT-KWGLIERVTIKVRDISEG-FDEKDVDALFLDV- 189 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHH-HTTCGGGEEEECCCGGGC-CSCCSEEEEEECC-
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH-HcCCCCCEEEEECCHHHc-ccCCccCEEEECC-
Confidence 458999999999999888753 58889998887766654333 334 3578888887665 6667899999632
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
+++..++.++.++|+|||.+++..+.. ....++.+.+++.||..+....
T Consensus 190 -----~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 190 -----PDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp -----SCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred -----cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceeEEEE
Confidence 355678999999999999999988752 2345666777889998765543
No 150
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.06 E-value=1.2e-10 Score=111.64 Aligned_cols=132 Identities=11% Similarity=0.104 Sum_probs=88.2
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
+.+|||+|||+|.++..++. ..++++|+++.++.-+..+ +...|....+.+.|.... .+.++||+|++.. ++|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~-~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k-~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSI-IGKLKTTIKYRFLNKESD-VYKGTYDVVFLLK-MLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHH-HHHSCCSSEEEEECCHHH-HTTSEEEEEEEET-CHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHH-HHhcCCCccEEEeccccc-CCCCCcChhhHhh-HHH
Confidence 46899999999999999954 2788999999888776644 444566545555665443 3457899999766 799
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcC-CCCCCChhhHH-HHHHHHHHHHhcCcEEEEEee
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSP-EAYAHDPENRR-IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P-~~~~~~~e~~~-~~~~l~~l~~~~gw~vv~~~~ 290 (555)
++++.+..+.++.+.|+|||+||-... ....+.+.... ....+++.+.+-.|.+.+.+.
T Consensus 127 lL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~ 187 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVI 187 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEE
T ss_pred hhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeee
Confidence 996666778899999999998885331 11112211111 123455666666665554443
No 151
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.05 E-value=2.7e-10 Score=109.21 Aligned_cols=123 Identities=11% Similarity=-0.027 Sum_probs=83.9
Q ss_pred CCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC-CC
Q 008748 127 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG-IP 202 (555)
Q Consensus 127 ~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg-~~ 202 (555)
.+.+..+...+.+.+.+... .+..+|||+|||+|.++..++.+ .|+++|+++.++..++.+.. ..+ .+
T Consensus 33 ~~rp~~~~~~~~l~~~l~~~-------~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~-~~~~~~ 104 (202)
T 2fpo_A 33 GLRPTTDRVRETLFNWLAPV-------IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLA-TLKAGN 104 (202)
T ss_dssp -----CHHHHHHHHHHHHHH-------HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHH-HTTCCS
T ss_pred CCCCCHHHHHHHHHHHHHhh-------cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHH-HcCCCc
Confidence 34444555555555555320 02358999999999999986643 68999999988877764443 334 37
Q ss_pred eEEEEeCCCC-CCCCCCCccEEEecccccccccchHHHHHHHHh--hcCCCcEEEEEcCC
Q 008748 203 STLGVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELDR--LLRPGGYFVYSSPE 259 (555)
Q Consensus 203 v~~~~~d~~~-Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~R--vLkPGG~lvis~P~ 259 (555)
+.+.++|+.. ++..+++||+|++... ++ ......++.++.+ +|+|||+++++...
T Consensus 105 v~~~~~D~~~~~~~~~~~fD~V~~~~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 105 ARVVNSNAMSFLAQKGTPHNIVFVDPP-FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEEECSCHHHHHSSCCCCEEEEEECCS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred EEEEECCHHHHHhhcCCCCCEEEECCC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 8899998765 5666678999997653 33 3455668888865 59999999997754
No 152
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.05 E-value=5.3e-10 Score=110.19 Aligned_cols=119 Identities=14% Similarity=0.111 Sum_probs=83.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH--------cCCCeEEEEeCCCC-CC--CCCCCc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE--------RGIPSTLGVLGTKR-LP--YPSRSF 220 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~--------rg~~v~~~~~d~~~-Lp--~~d~sF 220 (555)
..+|||||||+|.++..++.. .++++|+++.++..+..+.... ...++.+..+|+.. ++ +++++|
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 358999999999999998863 5899999998887666444332 22468899999775 66 778899
Q ss_pred cEEEecccccccccc--------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCc
Q 008748 221 ELAHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 283 (555)
Q Consensus 221 DlVv~s~~~l~~~~d--------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw 283 (555)
|.|+..+. -.|... ...++.++.++|+|||.|++.+... ...+.+.+.+...++
T Consensus 130 d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~--------~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 130 SKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVK--------DLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHHSTT
T ss_pred CEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccH--------HHHHHHHHHHHhCcC
Confidence 99985442 122110 0479999999999999999965331 233445555666654
No 153
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.04 E-value=1e-09 Score=106.21 Aligned_cols=129 Identities=12% Similarity=0.158 Sum_probs=84.9
Q ss_pred CCCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC---CCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp---~~d~sFDlVv~s 226 (555)
+..+|||+|||+|.++..|++ ..|+++|+++.++..+. +.++.. .++.+..+|+.... ...++||+|++.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~-~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH-HHHhcc-CCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 346899999999999998874 36889999888775554 333333 57889999976631 123589999975
Q ss_pred ccccccccchHHHHHHHHhhcCCCcEEEEEcCCCC-CCChhhHHHH-HHHHHHHHhcCcEEEEEee
Q 008748 227 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIW-NAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 227 ~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~-~~~~e~~~~~-~~l~~l~~~~gw~vv~~~~ 290 (555)
.. .......++.++.++|||||+++++..... .......... +++..+ ++. |+++....
T Consensus 151 ~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~ 211 (227)
T 1g8a_A 151 VA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLN 211 (227)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEE
T ss_pred CC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEec
Confidence 42 112223459999999999999999743211 1111111223 456666 666 98876544
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.04 E-value=4.3e-10 Score=118.45 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=77.7
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
+..+|||||||+|.++..++++ .|+++|++ .++..+. +.+...+. .+.+..+|+..++++ ++||+|+|.. .
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~-~ 138 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEW-M 138 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECC-C
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcC-h
Confidence 3468999999999999999874 68999999 7776555 44444444 389999999998887 8899999854 2
Q ss_pred cccc---cchHHHHHHHHhhcCCCcEEEEEc
Q 008748 230 IDWL---QRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 230 l~~~---~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
.++. .....++.++.++|||||.+++..
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 3333 456779999999999999998644
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.04 E-value=2.7e-10 Score=110.27 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=72.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||||||+|.++..+++. .++++|+++.++..+..+. ...+ ++.+..+|.......+++||+|++.. .+++.
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~-~~~~~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLL-SYYN-NIKLILGDGTLGYEEEKPYDRVVVWA-TAPTL 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTCS-SEEEEESCGGGCCGGGCCEEEEEESS-BBSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHH-hhcC-CeEEEECCcccccccCCCccEEEECC-cHHHH
Confidence 458999999999999999863 6888888877765554322 2223 78888898766333457899999887 46664
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
. .++.++|+|||+++++.+.
T Consensus 148 ~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 148 L------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp C------HHHHHTEEEEEEEEEEECS
T ss_pred H------HHHHHHcCCCcEEEEEEcC
Confidence 3 4789999999999998765
No 156
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.03 E-value=1.3e-09 Score=113.42 Aligned_cols=121 Identities=15% Similarity=0.042 Sum_probs=89.3
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
..+|||+|||+|.++..++. ..++|+|+++.++..+..+. ...+. .+.+.++|+..++.+.+.||+|+++...
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~-~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPy 282 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAA-LASGLSWIRFLRADARHLPRFFPEVDRILANPPH 282 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHH-HHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCS
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHH-HHcCCCceEEEeCChhhCccccCCCCEEEECCCC
Confidence 45899999999999888775 47999999999887776544 34444 6899999999988777789999985321
Q ss_pred c-------ccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 230 I-------DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 230 l-------~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
- +.......++.++.++|+|||.+++.++.. ..+..+.+ .||+.....
T Consensus 283 g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~-----------~~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 283 GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP-----------ALLKRALP-PGFALRHAR 337 (354)
T ss_dssp CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH-----------HHHHHHCC-TTEEEEEEE
T ss_pred cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH-----------HHHHHHhh-cCcEEEEEE
Confidence 1 111112568999999999999999988752 12334445 888776543
No 157
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.03 E-value=1.8e-09 Score=105.28 Aligned_cols=117 Identities=14% Similarity=0.121 Sum_probs=86.0
Q ss_pred CCEEEEECCCCcHHHHHHhc--CCCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~--~~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++..+++ ..++++|+++..+..+..+.+ ..+ .++.+...|.....+++++||+|++..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---- 166 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLK-KFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV---- 166 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHH-HTTCCTTEEEECSCTTTSCCCTTCBSEEEECS----
T ss_pred CCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCCcEEEEEcChhhcccCCCcccEEEECC----
Confidence 45899999999999998886 478889998887766654433 334 467888888776543567899999642
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEE
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~ 288 (555)
+++..++.++.++|+|||.+++..|.. ....++...+++. |..+..
T Consensus 167 --~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 167 --REPWHYLEKVHKSLMEGAPVGFLLPTA--------NQVIKLLESIENY-FGNLEV 212 (248)
T ss_dssp --SCGGGGHHHHHHHBCTTCEEEEEESSH--------HHHHHHHHHSTTT-EEEEEE
T ss_pred --cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHhh-CCcceE
Confidence 355678999999999999999988763 2344555666665 765543
No 158
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.03 E-value=5.8e-10 Score=114.37 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=75.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC--C---CccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--D---IIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~---V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
..+|||||||+|.++..+++. . |+++|+++.++..+..+.. ..+ .++.+..+|....+.++++||+|++.. .
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~-~ 153 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVE-RLGIENVIFVCGDGYYGVPEFSPYDVIFVTV-G 153 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCGGGCCGGGCCEEEEEECS-B
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCeEEEECChhhccccCCCeEEEEEcC-C
Confidence 468999999999999998863 3 8999999888866664433 334 358889999877655567899999887 4
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++++. .++.++|||||.++++...
T Consensus 154 ~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 154 VDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred HHHHH------HHHHHhcCCCcEEEEEECC
Confidence 66654 5788999999999998654
No 159
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.02 E-value=8.5e-10 Score=105.59 Aligned_cols=97 Identities=13% Similarity=0.050 Sum_probs=73.0
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||||||+|.++..+++ ..++++|+++..+..+..+.......++.+..+|.......+++||+|++.. .+
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~~ 156 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA-AG 156 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS-BB
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC-ch
Confidence 46899999999999988875 3688999988887666644433323457888888643322357899999887 46
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++.. .++.++|||||.++++.+.
T Consensus 157 ~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 157 PKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SSCC------HHHHHTEEEEEEEEEEESS
T ss_pred HHHH------HHHHHHcCCCcEEEEEECC
Confidence 6543 5889999999999998865
No 160
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.02 E-value=1.5e-10 Score=107.49 Aligned_cols=120 Identities=17% Similarity=0.065 Sum_probs=80.5
Q ss_pred cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEE
Q 008748 131 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTL 205 (555)
Q Consensus 131 ~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~ 205 (555)
..+...+.+.+.+... .+..+|||+|||+|.++..+++. .++++|+++.++..++.+. ...+. ++.+
T Consensus 14 ~~~~~~~~~~~~l~~~-------~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~ 85 (177)
T 2esr_A 14 TSDKVRGAIFNMIGPY-------FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNI-IMTKAENRFTL 85 (177)
T ss_dssp ----CHHHHHHHHCSC-------CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-HTTTCGGGEEE
T ss_pred CHHHHHHHHHHHHHhh-------cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-HHcCCCCceEE
Confidence 3344445555555411 23468999999999999988864 6889999888876665433 33343 4788
Q ss_pred EEeCCCC-CCCCCCCccEEEecccccccccchHHHHHHHH--hhcCCCcEEEEEcCCC
Q 008748 206 GVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 260 (555)
Q Consensus 206 ~~~d~~~-Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~--RvLkPGG~lvis~P~~ 260 (555)
..+|+.. ++..+++||+|++.. .++ ......++..+. ++|+|||.+++..+..
T Consensus 86 ~~~d~~~~~~~~~~~fD~i~~~~-~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 86 LKMEAERAIDCLTGRFDLVFLDP-PYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ECSCHHHHHHHBCSCEEEEEECC-SSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECcHHHhHHhhcCCCCEEEECC-CCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 8888655 344446799999764 232 233455777776 9999999999987654
No 161
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.02 E-value=1.1e-09 Score=114.67 Aligned_cols=126 Identities=12% Similarity=0.019 Sum_probs=88.1
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
+..+|||||||+|.++..++++ .++++|+ +.++ +.+++ ..++.+..+|+.. +++++ |+|++.. ++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-----~~a~~-~~~v~~~~~d~~~-~~p~~--D~v~~~~-vl 271 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVI-----QDAPA-FSGVEHLGGDMFD-GVPKG--DAIFIKW-IC 271 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-----TTCCC-CTTEEEEECCTTT-CCCCC--SEEEEES-CG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHH-----Hhhhh-cCCCEEEecCCCC-CCCCC--CEEEEec-hh
Confidence 4579999999999999999863 4556666 4333 33332 3578999999876 67754 9999888 57
Q ss_pred ccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCC---Chh-------hHH-----------HHHHHHHHHHhcCcEEEE
Q 008748 231 DWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH---DPE-------NRR-----------IWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 231 ~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~---~~e-------~~~-----------~~~~l~~l~~~~gw~vv~ 287 (555)
|+..+. ..+|++++++|||||++++........ ... +.. .-+++.+++++.||+.+.
T Consensus 272 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 351 (368)
T 3reo_A 272 HDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFK 351 (368)
T ss_dssp GGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeE
Confidence 766554 468999999999999999976432111 100 000 023688999999999887
Q ss_pred Eeec
Q 008748 288 KKDQ 291 (555)
Q Consensus 288 ~~~~ 291 (555)
....
T Consensus 352 ~~~~ 355 (368)
T 3reo_A 352 VASC 355 (368)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 162
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.02 E-value=1.5e-11 Score=120.15 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=78.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++..+++. .|+++|+++.++..+..+. ...+. ++.+.++|+..++ ++++||+|++.. .++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~-~~~ 155 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNA-EVYGIADKIEFICGDFLLLA-SFLKADVVFLSP-PWG 155 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHG-GGCCCSEEEECC-CCS
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HHcCCCcCeEEEECChHHhc-ccCCCCEEEECC-CcC
Confidence 358999999999999999875 6889999988887666443 34453 6899999987776 557999999876 577
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEE
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis 256 (555)
+..+....+.++.++|+|||.+++.
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CcchhhhHHHHHHhhcCCcceeHHH
Confidence 7777666788999999999997763
No 163
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.01 E-value=9.7e-10 Score=103.93 Aligned_cols=92 Identities=12% Similarity=0.144 Sum_probs=69.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC------CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC---------------
Q 008748 156 IRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------------- 214 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~------~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp--------------- 214 (555)
..+|||+|||+|.++..++++ .|+++|+++.. ...++.+.++|+..++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccccc
Confidence 358999999999999988752 58899988732 1245788889987776
Q ss_pred ----------CCCCCccEEEecccccccc----cch-------HHHHHHHHhhcCCCcEEEEEcCC
Q 008748 215 ----------YPSRSFELAHCSRCRIDWL----QRD-------GILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 215 ----------~~d~sFDlVv~s~~~l~~~----~d~-------~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+++++||+|+|.. .+++. .+. ..++.++.++|||||.|++....
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDA-AVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhHHHHHhhcCCCcccEEEeCC-CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5667999999876 35543 222 23789999999999999986643
No 164
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.01 E-value=6.7e-10 Score=114.71 Aligned_cols=98 Identities=18% Similarity=0.258 Sum_probs=76.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccc--
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC-- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~-- 228 (555)
..+|||||||+|.++..+++. .|+++|+++ ++..+. +.+...+. .+.+..+|+..+++++++||+|+|...
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAK-ELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHH-HHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 358999999999999998864 688999984 555444 33444443 588999999999888889999998631
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEE
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVY 255 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvi 255 (555)
.+.+......++.++.++|||||.++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 233445567899999999999999984
No 165
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=3.3e-09 Score=104.91 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=74.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCC-CCCC--CCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYP--SRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~-Lp~~--d~sFDlVv~ 225 (555)
+.+|||||||+|..+..|++. .|+++|+++..+..++.++. +.+. ++.+.++|+.. ++.. .++||+|++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQ-LAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 368999999999999999864 68899999888876664443 3333 58899998654 3332 348999997
Q ss_pred cccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 226 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 226 s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
.. ...+...++.++.++|||||++++....
T Consensus 143 d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 143 DA----DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CS----CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CC----chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 54 2344467899999999999999986643
No 166
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.00 E-value=9e-10 Score=114.32 Aligned_cols=124 Identities=10% Similarity=0.017 Sum_probs=88.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..++++ .++++|+ +.++ +.|++. .++.+..+|+.. ++++ ||+|++++ ++|
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-----~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~-~lh 257 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVV-----ENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKY-ILH 257 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-----TTCCCB-TTEEEEECCTTT-CCCC--CSEEEEES-CGG
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHH-----hhcccC-CCcEEEeccccC-CCCC--ccEEEeeh-hhc
Confidence 469999999999999999853 4667776 5444 333332 358899999755 5553 99999888 588
Q ss_pred cccchH--HHHHHHHhhcCC---CcEEEEEcCCCCCCCh-----hhH---H-----------HHHHHHHHHHhcCcEEEE
Q 008748 232 WLQRDG--ILLLELDRLLRP---GGYFVYSSPEAYAHDP-----ENR---R-----------IWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 232 ~~~d~~--~~L~el~RvLkP---GG~lvis~P~~~~~~~-----e~~---~-----------~~~~l~~l~~~~gw~vv~ 287 (555)
+..+.. .+|+++.++||| ||++++..+....... ... . .-+++.+++++.||+++.
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 777776 899999999999 9999997643211110 100 0 124778899999998876
Q ss_pred Eee
Q 008748 288 KKD 290 (555)
Q Consensus 288 ~~~ 290 (555)
...
T Consensus 338 ~~~ 340 (352)
T 1fp2_A 338 ISP 340 (352)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 167
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.99 E-value=1.1e-09 Score=117.54 Aligned_cols=103 Identities=7% Similarity=-0.042 Sum_probs=75.1
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHH--HHHHH----HHcC---CCeEEEEeCCCCC--CC--CC
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHEN--QIQFA----LERG---IPSTLGVLGTKRL--PY--PS 217 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a--~i~~A----~~rg---~~v~~~~~d~~~L--p~--~d 217 (555)
...+|||||||+|.++..++.. .|+|+|+++.++..+ +++.+ ...+ .++.+..+|.... ++ ..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 3468999999999999998862 589999999877665 32222 2334 4677877754322 22 24
Q ss_pred CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 218 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 218 ~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++||+|+++.. + +.++...+|.++.++|||||.+++..+.
T Consensus 322 ~~FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 322 PQCDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp GGCSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred CCCCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 68999998653 3 4567777899999999999999997543
No 168
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.99 E-value=4.7e-10 Score=117.47 Aligned_cols=125 Identities=15% Similarity=0.058 Sum_probs=88.1
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
+..+|||||||+|.++..++++ .++++|+ +.++ +.|++ ..++.+..+|+.. ++++ ||+|+++. ++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-----~~a~~-~~~v~~~~~d~~~-~~~~--~D~v~~~~-~l 277 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVI-----ENAPP-LSGIEHVGGDMFA-SVPQ--GDAMILKA-VC 277 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH-----TTCCC-CTTEEEEECCTTT-CCCC--EEEEEEES-SG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHH-----Hhhhh-cCCCEEEeCCccc-CCCC--CCEEEEec-cc
Confidence 3469999999999999999864 2444465 4433 33333 2468899999876 6664 99999888 68
Q ss_pred ccccchH--HHHHHHHhhcCCCcEEEEEc---CCCCCCC-----hhhHH------------HHHHHHHHHHhcCcEEEEE
Q 008748 231 DWLQRDG--ILLLELDRLLRPGGYFVYSS---PEAYAHD-----PENRR------------IWNAMYDLLKSMCWKIVSK 288 (555)
Q Consensus 231 ~~~~d~~--~~L~el~RvLkPGG~lvis~---P~~~~~~-----~e~~~------------~~~~l~~l~~~~gw~vv~~ 288 (555)
|+.++.. .+|+++.++|||||++++.. |...... ..... ..+++.+++++.||+++..
T Consensus 278 h~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 357 (372)
T 1fp1_D 278 HNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQV 357 (372)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEE
Confidence 8887776 89999999999999999874 2211110 00001 1237788999999988765
Q ss_pred ee
Q 008748 289 KD 290 (555)
Q Consensus 289 ~~ 290 (555)
..
T Consensus 358 ~~ 359 (372)
T 1fp1_D 358 AC 359 (372)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 169
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.99 E-value=1.1e-09 Score=111.90 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=75.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH-----cCCCeEEEEeCCCCC-CCCCCCccEEE
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----RGIPSTLGVLGTKRL-PYPSRSFELAH 224 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~-----rg~~v~~~~~d~~~L-p~~d~sFDlVv 224 (555)
++++|||||||+|.++..+++. .|+++|+++.++..++..+... ...++.+.++|.... ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3579999999999999999874 5889999998887766544332 134688899996553 44568899999
Q ss_pred ecccccccccch----HHHHHHHHhhcCCCcEEEEEcCCCC
Q 008748 225 CSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 261 (555)
Q Consensus 225 ~s~~~l~~~~d~----~~~L~el~RvLkPGG~lvis~P~~~ 261 (555)
+.. ..++.... ..+++++.++|+|||++++.....+
T Consensus 163 ~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred ECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 743 23332221 5699999999999999999764433
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.98 E-value=1.2e-09 Score=106.57 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=72.8
Q ss_pred CCEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCC-CccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSR-SFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~-sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..+++ ..|+++|+++..+..+..+.......++.+..+|. ..+++++ .||+|++.. .++
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~-~~~ 169 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTA-GAP 169 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECS-BBS
T ss_pred CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECC-cHH
Confidence 35899999999999999886 47899999988776666444332223578888886 4455444 499999877 455
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
+.. .++.++|+|||.++++.+..
T Consensus 170 ~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 170 KIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SCC------HHHHHTEEEEEEEEEEECSS
T ss_pred HHH------HHHHHhcCCCcEEEEEEecC
Confidence 543 47899999999999988764
No 171
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.97 E-value=6.4e-10 Score=107.59 Aligned_cols=101 Identities=17% Similarity=0.213 Sum_probs=74.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCC-CCCC-----CCCccE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYP-----SRSFEL 222 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~-Lp~~-----d~sFDl 222 (555)
+.+|||||||+|.++..|++. .|+++|+++.++..+..++.. .+. ++.+.++|+.. ++.. .++||+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNF-AGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH-cCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 368999999999999999863 688999999888766644433 343 48899988633 3322 268999
Q ss_pred EEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 223 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 223 Vv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
|++.. ..++..+...++.++ ++|||||++++....
T Consensus 138 V~~d~-~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 138 VFLDH-WKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEECS-CGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEcC-CcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 99776 344444445577777 999999999986543
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.97 E-value=1.3e-09 Score=113.54 Aligned_cols=99 Identities=15% Similarity=0.189 Sum_probs=74.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||||||+|.++..+++. .|+++|+++ ++..+. +.+...+ .++.+..+|+..++++ ++||+|++.....
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchh
Confidence 468999999999999998864 689999986 554443 3444444 4689999999888776 6799999876433
Q ss_pred ccc-cchHHHHHHHHhhcCCCcEEEEEc
Q 008748 231 DWL-QRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 231 ~~~-~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
++. +.....+.++.++|||||.+++..
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 332 233567889999999999999654
No 173
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.96 E-value=1.4e-09 Score=111.70 Aligned_cols=126 Identities=18% Similarity=0.137 Sum_probs=87.7
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecc---
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR--- 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~--- 227 (555)
..+|||+|||+|..+..|++ ..|+++|+++..+..+..+..+....++.+..+|+..++..+++||+|++..
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 46899999999999999885 2589999999888766644433322368888899887765557899999731
Q ss_pred --cccccccc----------------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEE
Q 008748 228 --CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 228 --~~l~~~~d----------------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv 286 (555)
..++..++ ...+|.++.++|||||++++++-.... .+.. ..+..++++.+|+++
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~--~Ene---~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP--EENE---FVIQWALDNFDVELL 270 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG--GGTH---HHHHHHHHHSSEEEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh--HHhH---HHHHHHHhcCCCEEe
Confidence 11221111 146899999999999999998754321 2221 245667778888766
No 174
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.96 E-value=2.5e-09 Score=110.97 Aligned_cols=129 Identities=6% Similarity=-0.025 Sum_probs=88.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCC----CCCCccEEEecc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPY----PSRSFELAHCSR 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~----~d~sFDlVv~s~ 227 (555)
..+|||+|||+|.++..++.. .|+++|+++.++..+..+.....-. ++.+.++|+..+.. ..++||+|++.-
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dP 233 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDP 233 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECC
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECC
Confidence 358999999999999999864 6889999998887777555443322 37888888755421 146899999842
Q ss_pred c---------ccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEE
Q 008748 228 C---------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 228 ~---------~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv 286 (555)
. +.++..+...++.++.++|+|||+|+++......... ......+.+.+++.|+.+.
T Consensus 234 P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~--~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 234 PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASF--YSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCH--HHHHHHHHHHTTTSCSEEE
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCH--HHHHHHHHHHHHHcCCeEE
Confidence 1 1223445567999999999999998876654322221 1223344556678888765
No 175
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.95 E-value=2e-09 Score=112.69 Aligned_cols=126 Identities=17% Similarity=0.090 Sum_probs=88.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
...+|||||||+|.++..++++ .++++|+ +.. ++.|++ ..++.+..+|+.. |++.+ |+|+++. ++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~-----~~~a~~-~~~v~~~~~D~~~-~~p~~--D~v~~~~-vl 269 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHV-----ISEAPQ-FPGVTHVGGDMFK-EVPSG--DTILMKW-IL 269 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHH-----HTTCCC-CTTEEEEECCTTT-CCCCC--SEEEEES-CG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHH-----HHhhhh-cCCeEEEeCCcCC-CCCCC--CEEEehH-Hh
Confidence 4579999999999999999863 4566666 333 233332 3578999999877 77754 9999888 57
Q ss_pred ccccch--HHHHHHHHhhcCCCcEEEEEcCCCCCC---Chh-------hHHH-----------HHHHHHHHHhcCcEEEE
Q 008748 231 DWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH---DPE-------NRRI-----------WNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 231 ~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~~---~~e-------~~~~-----------~~~l~~l~~~~gw~vv~ 287 (555)
|+..+. ..+|++++++|||||++++........ ... +... -+++.+++++.||+.++
T Consensus 270 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 349 (364)
T 3p9c_A 270 HDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVK 349 (364)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEE
Confidence 665443 568999999999999999976432111 100 0000 23678999999999887
Q ss_pred Eeec
Q 008748 288 KKDQ 291 (555)
Q Consensus 288 ~~~~ 291 (555)
....
T Consensus 350 ~~~~ 353 (364)
T 3p9c_A 350 STYI 353 (364)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6543
No 176
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.95 E-value=3.5e-10 Score=119.69 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=74.6
Q ss_pred CCEEEEECCC------CcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCC------CC
Q 008748 156 IRNVLDVGCG------VASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP------SR 218 (555)
Q Consensus 156 ~~~VLDIGCG------tG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~------d~ 218 (555)
+.+||||||| +|..+..++. ..|+++|+++.+. ....++.+.++|+.++++. ++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhcccC
Confidence 4689999999 6666665553 3789999998863 1346799999999998887 68
Q ss_pred CccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 219 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 219 sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
+||+|+|.. .|+..+...+|+++.|+|||||+|++.+.
T Consensus 288 sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 288 PFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 999999764 46667778899999999999999999753
No 177
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.95 E-value=4.6e-09 Score=109.47 Aligned_cols=132 Identities=17% Similarity=0.154 Sum_probs=87.7
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
...+|||||||+|.++..++++ +++..|. +..+..+....+.....++.+..+|+...|.+ .+|+|++.+ ++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~-vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILAR-VL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEES-SG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeee-ec
Confidence 3468999999999999999874 3344444 33332222111111235689999998666655 479999888 57
Q ss_pred ccccch--HHHHHHHHhhcCCCcEEEEEcCCCCC--CChhhHH---------------HHHHHHHHHHhcCcEEEEEee
Q 008748 231 DWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA--HDPENRR---------------IWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 231 ~~~~d~--~~~L~el~RvLkPGG~lvis~P~~~~--~~~e~~~---------------~~~~l~~l~~~~gw~vv~~~~ 290 (555)
|..++. ..+|++++++|+|||.++|...-... ..+.... ...++.+++++.||+.++...
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 666555 45899999999999999997743211 1111111 124788999999999887654
No 178
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.94 E-value=7.7e-10 Score=108.16 Aligned_cols=97 Identities=7% Similarity=0.128 Sum_probs=75.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-C-CCCCCccEEEecc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YPSRSFELAHCSR 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p-~~d~sFDlVv~s~ 227 (555)
..+|||||||+|.++..|+.. .|+++|+++.++..++.++ ...+. ++.+..+|+... + ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNL-ATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 358999999999999999872 6889999988887666444 33443 689999997553 4 3368899999654
Q ss_pred cccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 228 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 228 ~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
. ..+...++.++.++|||||+|++..
T Consensus 151 ~----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 151 A----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp T----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred c----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 2 3445679999999999999998854
No 179
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.93 E-value=1.9e-09 Score=111.99 Aligned_cols=107 Identities=17% Similarity=0.166 Sum_probs=77.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEeCCCCC--CCCCCCccEEE
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRL--PYPSRSFELAH 224 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~----rg~~v~~~~~d~~~L--p~~d~sFDlVv 224 (555)
.+.+|||||||+|.++..|++. .|+++|+++.++..++.++... ...++.+.++|+..+ .+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 3469999999999999999864 6888999888876666444321 135789999986543 23457899999
Q ss_pred ecccc-cccccc--hHHHHHHHHhhcCCCcEEEEEcCCCC
Q 008748 225 CSRCR-IDWLQR--DGILLLELDRLLRPGGYFVYSSPEAY 261 (555)
Q Consensus 225 ~s~~~-l~~~~d--~~~~L~el~RvLkPGG~lvis~P~~~ 261 (555)
+.... .+.... ...+++++.++|+|||.|++.....+
T Consensus 200 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 200 VDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp ECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred ECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 75321 111111 36799999999999999999755444
No 180
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.93 E-value=7.9e-09 Score=108.61 Aligned_cols=121 Identities=17% Similarity=0.139 Sum_probs=88.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~ 229 (555)
..+|||+|||+|.++..++.. .|+|+|+++.++..+..+. ...+. .+.+.++|+..+++++++||+|+++...
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~-~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNA-LAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHH-HHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH-HHcCCCCceEEEECChhhCCcccCCcCEEEECCCC
Confidence 358999999999999998863 6899999999887776444 44454 6899999999999888899999985321
Q ss_pred c------ccccch-HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 230 I------DWLQRD-GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 230 l------~~~~d~-~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
- +...+. ..++.++.++| ||.+++.++. ...+++.+++.||+......
T Consensus 297 g~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----------~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 297 GLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----------KKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp C------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----------HHHHHHHHHHTTEEEEEEEE
T ss_pred CcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----------HHHHHHHHHHcCCEEEEEEE
Confidence 1 111111 55889999999 5665555543 23566788899998876543
No 181
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.93 E-value=4.6e-09 Score=105.58 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=77.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++..++.. .|+++|+++.++..+..+.......++.+..+|+..++. .++||+|++... .
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p-~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYV-H- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC-S-
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCc-c-
Confidence 468999999999999999863 689999999888777654443332467899999877744 578999997653 2
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+...++.++.++|+|||.++++...
T Consensus 197 ---~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 ---KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 4566899999999999999987644
No 182
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.93 E-value=1.2e-09 Score=105.56 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=74.5
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHc-----CCCeEEEEeCCCCCCCCCCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~r-----g~~v~~~~~d~~~Lp~~d~sFDlVv~ 225 (555)
..+|||||||+|.++..|++ ..|+++|+++..+..+..+..... ..++.+..+|....+..+++||+|++
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 157 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHV 157 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEE
Confidence 46899999999999988875 268899999888766664443321 23688888988766655678999998
Q ss_pred cccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 226 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 226 s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
... ++. ++.++.++|||||+++++.+.
T Consensus 158 ~~~-~~~------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 158 GAA-APV------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CSB-BSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred CCc-hHH------HHHHHHHhcCCCcEEEEEEec
Confidence 763 433 457899999999999998765
No 183
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.93 E-value=1.2e-09 Score=106.62 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=73.1
Q ss_pred CEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC---CeEEEEeCCCCC-C-CCCCCccEEEec
Q 008748 157 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRL-P-YPSRSFELAHCS 226 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~---~v~~~~~d~~~L-p-~~d~sFDlVv~s 226 (555)
.+|||||||+|..+..|+. ..|+++|+++.++..++.++. +.+. ++.+..+|+..+ + +++++||+|++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFR-EAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHH-HTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 4899999999999998885 268999999988877764443 3343 488888886443 2 336889999975
Q ss_pred ccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 227 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 227 ~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
.. ..+...++.++.++|||||++++..
T Consensus 137 ~~----~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 137 VS----PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CC----TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred Cc----HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 42 2344568999999999999999854
No 184
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.91 E-value=1.1e-09 Score=108.02 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=71.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC------CCccccCChhhhhHHHHHHHHHc--CC--C-----------------------
Q 008748 156 IRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALER--GI--P----------------------- 202 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~------~V~~vdis~~dls~a~i~~A~~r--g~--~----------------------- 202 (555)
..+|||+|||+|.++..++.. .|+++|+++.++..+..+..... +. .
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 468999999999999888753 68899999888866654332110 11 1
Q ss_pred --eE-------------EEEeCCCCCCC-----CCCCccEEEecccccccc---------cchHHHHHHHHhhcCCCcEE
Q 008748 203 --ST-------------LGVLGTKRLPY-----PSRSFELAHCSRCRIDWL---------QRDGILLLELDRLLRPGGYF 253 (555)
Q Consensus 203 --v~-------------~~~~d~~~Lp~-----~d~sFDlVv~s~~~l~~~---------~d~~~~L~el~RvLkPGG~l 253 (555)
+. +..+|+..... ..++||+|+|+.. +... .....++.++.++|+|||++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp-~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLP-YGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECC-GGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCC-eeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 34 88888765321 3458999998753 2222 22347999999999999999
Q ss_pred EEEcC
Q 008748 254 VYSSP 258 (555)
Q Consensus 254 vis~P 258 (555)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99543
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.91 E-value=6.7e-10 Score=107.35 Aligned_cols=97 Identities=14% Similarity=0.077 Sum_probs=75.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC---------CCccccCChhhhhHHHHHHHHHc-----CCCeEEEEeCCCCCC----CCC
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---------DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLP----YPS 217 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---------~V~~vdis~~dls~a~i~~A~~r-----g~~v~~~~~d~~~Lp----~~d 217 (555)
..+|||||||+|.++..+++. .|+++|+++..+..+..+..... ..++.+..+|..... ...
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 368999999999999888752 68899999888776665444332 346889999987655 556
Q ss_pred CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 218 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 218 ~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++||+|++.. .+++ ++.++.++|+|||++++..+.
T Consensus 161 ~~fD~I~~~~-~~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGA-SASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECS-BBSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECC-chHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 7899999876 3543 368899999999999998754
No 186
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.91 E-value=3.9e-09 Score=99.20 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=66.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC-------------CCccccCChhhhhHHHHHHHHHcCCCeEEE-EeCCCCCC-------
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-------------DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP------- 214 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-------------~V~~vdis~~dls~a~i~~A~~rg~~v~~~-~~d~~~Lp------- 214 (555)
..+|||+|||+|.++..|++. .|+++|+++.. ....+.+. .+|+...+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 468999999999999998853 37888888732 11346777 77765543
Q ss_pred -CCCCCccEEEeccc---ccccccch-------HHHHHHHHhhcCCCcEEEEEcCC
Q 008748 215 -YPSRSFELAHCSRC---RIDWLQRD-------GILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 215 -~~d~sFDlVv~s~~---~l~~~~d~-------~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+++++||+|+|..+ ..++..+. ..++.++.++|||||.|++....
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 34568999998542 12333333 46899999999999999998654
No 187
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.90 E-value=5.6e-09 Score=107.61 Aligned_cols=98 Identities=13% Similarity=0.111 Sum_probs=71.9
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHc-----------CCCeEEEEeCCCCC--CCCC
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER-----------GIPSTLGVLGTKRL--PYPS 217 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~r-----------g~~v~~~~~d~~~L--p~~d 217 (555)
..+|||+|||+|.++..|+. ..|+++|+++..+..+..+..... ..++.+..+|+..+ ++++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKS 185 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCC
Confidence 46899999999999988875 358899999988877765544311 24688999998776 5667
Q ss_pred CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 218 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 218 ~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++||+|++.. .++..++.++.++|+|||.+++..+.
T Consensus 186 ~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 186 LTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp --EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 7899999753 12334799999999999999998765
No 188
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.90 E-value=6.5e-09 Score=102.48 Aligned_cols=119 Identities=13% Similarity=0.053 Sum_probs=90.1
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
.+|||||||+|.++..|+.. .|+++|+++..+..+..+... .+. .+.+..+|......++..||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~-~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg 101 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE-HGLTSKIDVRLANGLSAFEEADNIDTITICGMGG 101 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH-TTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEECchhhccccccccCEEEEeCCch
Confidence 58999999999999999874 588999999988777755543 443 58999999766655544799988655211
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.-...++.+..+.|+++|+|+++.-. ....+.+.+.+.||.++...
T Consensus 102 ---~lI~~IL~~~~~~l~~~~~lIlqp~~----------~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 102 ---RLIADILNNDIDKLQHVKTLVLQPNN----------REDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCcCCEEEEECCC----------ChHHHHHHHHHCCCEEEEEE
Confidence 12245788889999999999987532 14577888999999988765
No 189
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.90 E-value=1.2e-09 Score=107.55 Aligned_cols=117 Identities=14% Similarity=0.088 Sum_probs=81.8
Q ss_pred CEEEEECCCCcHHHHHHhc--------CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC---CCCC-CCccEEE
Q 008748 157 RNVLDVGCGVASFGAYLLS--------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAH 224 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~--------~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L---p~~d-~sFDlVv 224 (555)
.+|||||||+|..+..|++ ..|+++|+++.++..+. ....++.+.++|...+ ++.+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 5899999999999988864 36899999998775443 3346789999998774 5433 4799999
Q ss_pred ecccccccccchHHHHHHHHh-hcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc--CcEEE
Q 008748 225 CSRCRIDWLQRDGILLLELDR-LLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM--CWKIV 286 (555)
Q Consensus 225 ~s~~~l~~~~d~~~~L~el~R-vLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~--gw~vv 286 (555)
+... | .+...++.++.| +|||||++++.....+ .....-..+.+++++. +|.+.
T Consensus 158 ~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~----~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 158 IDNA--H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPY----WYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EESS--C--SSHHHHHHHHHHHTCCTTCEEEECSCHHH----HHHHCHHHHHHHHHTTTTTEEEE
T ss_pred ECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEeCccc----ccccCHHHHHHHHHhCcccEEEc
Confidence 7542 2 356779999998 9999999999653100 0000112566677766 46543
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.89 E-value=1.8e-09 Score=104.74 Aligned_cols=96 Identities=17% Similarity=0.213 Sum_probs=73.6
Q ss_pred CCEEEEECCCCcHHHHHHhc----------CCCccccCChhhhhHHHHHHHHHc-----CCCeEEEEeCCCCCCCCC-CC
Q 008748 156 IRNVLDVGCGVASFGAYLLS----------HDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPS-RS 219 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----------~~V~~vdis~~dls~a~i~~A~~r-----g~~v~~~~~d~~~Lp~~d-~s 219 (555)
..+|||||||+|.++..|++ ..|+++|+++..+..+..+..... ..++.+..+|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 45899999999999988875 268999999988877665444322 3468888888765 4444 78
Q ss_pred ccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 220 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 220 FDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
||+|++.. .+++. +.++.++|||||++++....
T Consensus 164 fD~I~~~~-~~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGA-AAPDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECS-CBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECC-chHHH------HHHHHHHhcCCCEEEEEEec
Confidence 99999877 45543 47899999999999998754
No 191
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.89 E-value=7.7e-10 Score=111.82 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=73.0
Q ss_pred CCCEEEEECCCC--cHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC----CC--CCCcc
Q 008748 155 NIRNVLDVGCGV--ASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YP--SRSFE 221 (555)
Q Consensus 155 ~~~~VLDIGCGt--G~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp----~~--d~sFD 221 (555)
..++|||||||+ +..+..+++ .+|+++|.++.++..++.........++.++++|+.+++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 457899999997 333444332 479999999988876654332211124789999987752 11 34566
Q ss_pred -----EEEecccccccccch---HHHHHHHHhhcCCCcEEEEEcCC
Q 008748 222 -----LAHCSRCRIDWLQRD---GILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 222 -----lVv~s~~~l~~~~d~---~~~L~el~RvLkPGG~lvis~P~ 259 (555)
.|+++ .++||+++. ..+++++.++|+|||+|+++...
T Consensus 158 ~~~p~av~~~-avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 158 LTRPVALTVI-AIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TTSCCEEEEE-SCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred cCCcchHHhh-hhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 46544 489999884 57999999999999999998643
No 192
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.88 E-value=7.4e-09 Score=102.94 Aligned_cols=119 Identities=12% Similarity=0.039 Sum_probs=89.0
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
.+|||||||+|.++..|+.. .|+++|+++..+..+..+.. ..+. .+.+..+|......++..||+|++....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~-~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg 101 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVR-SSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG 101 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH-HTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEEecchhhccCccccccEEEEeCCch
Confidence 58999999999999999874 58899999998877775544 3443 48899999766554444699988654211
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.-...++.+..+.|+++|+|+++.-. ....+.+.+.+.||.++...
T Consensus 102 ---~lI~~IL~~~~~~L~~~~~lIlq~~~----------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 102 ---TLIRTILEEGAAKLAGVTKLILQPNI----------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESS----------CHHHHHHHHHHHTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEEEcCC----------ChHHHHHHHHHCCCEEEEEE
Confidence 12245788899999999999987532 13567888999999987655
No 193
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.88 E-value=2.2e-09 Score=103.40 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=73.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-C-CC---CCCccEE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YP---SRSFELA 223 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p-~~---d~sFDlV 223 (555)
+.+|||||||+|.++..+++. .++++|+++..+..++.++. ..+. .+.+..+|+... + ++ .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE-RANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 358999999999999999864 58889998888766664443 3333 488898886432 2 11 2579999
Q ss_pred EecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 224 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 224 v~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++... ......++.++.++|+|||++++....
T Consensus 138 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 138 FIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 97642 234467899999999999999987654
No 194
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.88 E-value=3.7e-09 Score=100.81 Aligned_cols=111 Identities=12% Similarity=0.074 Sum_probs=75.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCC-----------CCCccE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-----------SRSFEL 222 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~-----------d~sFDl 222 (555)
..+|||+|||+|.++..+++. .|+++|+++.. ...++.+.++|+...+.. .++||+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 469999999999999999974 68899988742 124688999998776521 148999
Q ss_pred EEeccccccc----ccc-------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEE
Q 008748 223 AHCSRCRIDW----LQR-------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 223 Vv~s~~~l~~----~~d-------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~ 287 (555)
|+|... ... ..+ ...++.++.++|||||.|++..-.. . ....+...++. .|..+.
T Consensus 95 Vlsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~----~----~~~~~~~~l~~-~F~~v~ 160 (191)
T 3dou_A 95 VVSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG----D----MTNDFIAIWRK-NFSSYK 160 (191)
T ss_dssp EEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS----T----HHHHHHHHHGG-GEEEEE
T ss_pred EecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC----C----CHHHHHHHHHH-hcCEEE
Confidence 997531 111 111 2457899999999999999865322 1 12345555544 465553
No 195
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.88 E-value=1.7e-08 Score=105.98 Aligned_cols=128 Identities=10% Similarity=0.031 Sum_probs=91.3
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCC-CCC-CCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKR-LPY-PSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~-Lp~-~d~sFDlVv~s~~ 228 (555)
+.+|||+| |+|.++..++. ..|+++|+++.++..+..+.. ..+. ++.+..+|+.. +|. .+++||+|+++.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~-~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~- 249 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAAN-EIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP- 249 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHH-HHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC-
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCEEEEEChhhhhchhhccCCccEEEECC-
Confidence 46899999 99999988875 268999999988877664443 3344 78999999877 764 456899999764
Q ss_pred ccccccchHHHHHHHHhhcCCCc-EEEEEcCCCCCCChhhHHHHHHHHHHHH-hcCcEEEEEeec
Q 008748 229 RIDWLQRDGILLLELDRLLRPGG-YFVYSSPEAYAHDPENRRIWNAMYDLLK-SMCWKIVSKKDQ 291 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG-~lvis~P~~~~~~~e~~~~~~~l~~l~~-~~gw~vv~~~~~ 291 (555)
.++... ...++.++.++||||| .++++.-. .......|..+.+++. +.|+.+......
T Consensus 250 p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 309 (373)
T 2qm3_A 250 PETLEA-IRAFVGRGIATLKGPRCAGYFGITR----RESSLDKWREIQKLLLNEFNVVITDIIRN 309 (373)
T ss_dssp CSSHHH-HHHHHHHHHHTBCSTTCEEEEEECT----TTCCHHHHHHHHHHHHHTSCCEEEEEEEE
T ss_pred CCchHH-HHHHHHHHHHHcccCCeEEEEEEec----CcCCHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 333322 4678999999999999 44554432 0112234567777787 889987655443
No 196
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.88 E-value=1.4e-09 Score=104.12 Aligned_cols=96 Identities=10% Similarity=0.118 Sum_probs=72.8
Q ss_pred CEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCC-CCCCCCCccEEEeccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYPSRSFELAHCSRC 228 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~-Lp~~d~sFDlVv~s~~ 228 (555)
.+|||||||+|..+..|+.. .|+++|+++.++..+..++.. .+. .+.+..+|... ++..++ ||+|++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD-NGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 58999999999999999854 688999988887666644433 232 47888888654 354456 999997632
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
..+...++.++.++|||||++++...
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 34557799999999999999998653
No 197
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.88 E-value=3.9e-09 Score=106.11 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=68.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC-CCccccCChhhhhHHHHH-H-HHHcCCCeEEE--EeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQ-F-ALERGIPSTLG--VLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-~V~~vdis~~dls~a~i~-~-A~~rg~~v~~~--~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||||||+|.++..+++. .|+++|+++ +...+..+ . ....+.++.+. ++|+..++ +++||+|+|...
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-- 149 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-- 149 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC--
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc--
Confidence 468999999999999999874 799999988 42111000 0 00011256788 88888776 578999998653
Q ss_pred ccccch----H---HHHHHHHhhcCCCc--EEEEEcC
Q 008748 231 DWLQRD----G---ILLLELDRLLRPGG--YFVYSSP 258 (555)
Q Consensus 231 ~~~~d~----~---~~L~el~RvLkPGG--~lvis~P 258 (555)
++..+. . .+|.++.++||||| .|++.+.
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 332221 1 37899999999999 9998664
No 198
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.88 E-value=2.2e-09 Score=108.55 Aligned_cols=99 Identities=14% Similarity=0.123 Sum_probs=68.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC-CCccccCChhhhhHHHHHH--HHHcCCCeEEE--EeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQF--ALERGIPSTLG--VLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-~V~~vdis~~dls~a~i~~--A~~rg~~v~~~--~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||+|||+|.++..+++. .|+++|+++ +...+..+. ....+.++.+. ++|+..++ +++||+|+|...
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-- 157 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG-- 157 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC--
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC--
Confidence 468999999999999999874 799999988 432111000 00001257788 88888776 578999998753
Q ss_pred ccccch----H---HHHHHHHhhcCCCc--EEEEEcCC
Q 008748 231 DWLQRD----G---ILLLELDRLLRPGG--YFVYSSPE 259 (555)
Q Consensus 231 ~~~~d~----~---~~L~el~RvLkPGG--~lvis~P~ 259 (555)
++..++ . .+|.++.++||||| .|++....
T Consensus 158 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 158 ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 332221 1 37899999999999 99986543
No 199
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.87 E-value=3.8e-09 Score=109.83 Aligned_cols=124 Identities=10% Similarity=0.041 Sum_probs=87.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||||||+|.++..++++ .++++|+ +.++ +.+++ ..++.+..+|+.. +++ +||+|+++. ++|
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-----~~a~~-~~~v~~~~~d~~~-~~~--~~D~v~~~~-vlh 262 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVV-----GNLTG-NENLNFVGGDMFK-SIP--SADAVLLKW-VLH 262 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHH-----SSCCC-CSSEEEEECCTTT-CCC--CCSEEEEES-CGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHH-----hhccc-CCCcEEEeCccCC-CCC--CceEEEEcc-ccc
Confidence 368999999999999999864 3555565 3333 33322 2458889999876 666 499999888 688
Q ss_pred cccchH--HHHHHHHhhcCC---CcEEEEEcCCCCC--CC---hhhHH---------------HHHHHHHHHHhcCcEEE
Q 008748 232 WLQRDG--ILLLELDRLLRP---GGYFVYSSPEAYA--HD---PENRR---------------IWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 232 ~~~d~~--~~L~el~RvLkP---GG~lvis~P~~~~--~~---~e~~~---------------~~~~l~~l~~~~gw~vv 286 (555)
+..+.. .+|+++.++|+| ||++++..+.... .. ..... ...++.+++++.||+++
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 342 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSY 342 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCee
Confidence 877766 899999999999 9999997643211 11 01100 12377889999999887
Q ss_pred EEee
Q 008748 287 SKKD 290 (555)
Q Consensus 287 ~~~~ 290 (555)
....
T Consensus 343 ~~~~ 346 (358)
T 1zg3_A 343 KITP 346 (358)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6544
No 200
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.87 E-value=5.2e-10 Score=124.01 Aligned_cols=100 Identities=19% Similarity=0.174 Sum_probs=78.0
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCC--CCCCCCccEEEecccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRL--PYPSRSFELAHCSRCR 229 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~L--p~~d~sFDlVv~s~~~ 229 (555)
++.+|||||||.|.++..|++. .|+|+|+++.++..++. .|.+.+ .++.+.+++++++ ++.+++||+|+|.. +
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e-~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA-LAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS-V 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES-C
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH-HHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc-c
Confidence 3468999999999999999974 78899998888877663 344444 6789999998887 46778999999988 6
Q ss_pred cccccchHH--HHHHHHhhcCCCcEEEEE
Q 008748 230 IDWLQRDGI--LLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 230 l~~~~d~~~--~L~el~RvLkPGG~lvis 256 (555)
++|++++.. .+..+.+.|+++|..++.
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 999988753 345667778777765543
No 201
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.86 E-value=3.2e-10 Score=111.77 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=64.2
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC---CCC---CCCccEE
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL---PYP---SRSFELA 223 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L---p~~---d~sFDlV 223 (555)
..+|||+|||+|.++..++. ..|+++|+++.++..+..+.. ..+. ++.+..+|+... +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE-QNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH-HcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 46899999999998888774 378999999998877765443 3343 388999987652 444 2689999
Q ss_pred Eeccccccccc---------------chHHHHHHHHhhcCCCcEEEE
Q 008748 224 HCSRCRIDWLQ---------------RDGILLLELDRLLRPGGYFVY 255 (555)
Q Consensus 224 v~s~~~l~~~~---------------d~~~~L~el~RvLkPGG~lvi 255 (555)
+|+.. .+... ....++.++.|+|||||.+.+
T Consensus 145 ~~npp-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 145 MCNPP-FFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EECCC-CC-------------------------CTTTTHHHHTHHHH
T ss_pred EECCC-CccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 98742 22111 112356677777777776654
No 202
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.85 E-value=3e-08 Score=94.18 Aligned_cols=121 Identities=9% Similarity=0.033 Sum_probs=84.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||+|||+|.++..+++. .++++|+++.++..+..+. ...+.++.+..+|+..++ ++||+|+++. ..+.
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~---~~~D~v~~~~-p~~~ 124 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENL-GEFKGKFKVFIGDVSEFN---SRVDIVIMNP-PFGS 124 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHT-GGGTTSEEEEESCGGGCC---CCCSEEEECC-CCSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-HHcCCCEEEEECchHHcC---CCCCEEEEcC-CCcc
Confidence 468999999999999999864 4889998887776555332 233447899999988775 4899999875 3333
Q ss_pred cc--chHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEeec
Q 008748 233 LQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 291 (555)
Q Consensus 233 ~~--d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~~~ 291 (555)
.. ....++.++.++| ||.+++..+.. .....+.+.+++.||++......
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~~~~~--------~~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIHLAKP--------EVRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEEECCH--------HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEEeCCc--------CCHHHHHHHHHHCCCeEEEEEEE
Confidence 32 2356899999998 66555442221 23455677888999987655443
No 203
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.85 E-value=9.7e-09 Score=97.32 Aligned_cols=110 Identities=9% Similarity=0.079 Sum_probs=75.0
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
..+|||+|||+|.++..++.. .++++|+++.++.. |+++..++.+..+|+..++ ++||+|+++. .+++
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~-p~~~ 122 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIET-----AKRNCGGVNFMVADVSEIS---GKYDTWIMNP-PFGS 122 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHH-----HHHHCTTSEEEECCGGGCC---CCEEEEEECC-CC--
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHH-----HHHhcCCCEEEECcHHHCC---CCeeEEEECC-Cchh
Confidence 468999999999999998864 47788877766644 4443337889999988875 6899999876 4665
Q ss_pred ccc--hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEE
Q 008748 233 LQR--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 233 ~~d--~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~ 287 (555)
..+ ...++.++.++| |+.+++..+. .+..+.+++++.| .+..
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~~~~----------~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIGNAK----------ARDFLRREFSARG-DVFR 166 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEEEGG----------GHHHHHHHHHHHE-EEEE
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEEcCc----------hHHHHHHHHHHCC-CEEE
Confidence 543 246899999999 5544443322 1345667777887 5443
No 204
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.84 E-value=2.6e-09 Score=102.92 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=73.2
Q ss_pred CEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-C-CC----CCCccEE
Q 008748 157 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YP----SRSFELA 223 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p-~~----d~sFDlV 223 (555)
.+|||||||+|.++..|++. .|+++|+++.++..+...+. ..+. .+.+.++|+... + +. .++||+|
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWE-KAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH-HCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 58999999999999999863 68899999888776664443 3343 488888886432 2 11 1689999
Q ss_pred EecccccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 224 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 224 v~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
++.. ...+...++.++.++|||||++++....
T Consensus 145 ~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 145 YIDA----DKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EECS----CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EECC----CHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 9544 2344567999999999999999996643
No 205
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.84 E-value=2.2e-08 Score=98.36 Aligned_cols=118 Identities=13% Similarity=0.063 Sum_probs=87.4
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCC-CCCCCCCCCccEEEecccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGT-KRLPYPSRSFELAHCSRCR 229 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~-~~Lp~~d~sFDlVv~s~~~ 229 (555)
.+|||||||+|.++..++.. .|+++|+++..+..+..+.. ..+. .+.+..+|. ..++.. ..||+|+.....
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~-~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~G 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVE-AHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMG 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH-HTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEEECchhhhcccC-cCCCEEEEcCCC
Confidence 58999999999999999874 58999999998877775544 4444 488888886 445432 269999865521
Q ss_pred cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 230 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 230 l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
- .-...++.+....|+++|+|+++.-. ....+.+.+.+.||.++...
T Consensus 95 g---~~i~~Il~~~~~~L~~~~~lVlq~~~----------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 95 G---RLIARILEEGLGKLANVERLILQPNN----------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp H---HHHHHHHHHTGGGCTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCCCCEEEEECCC----------CHHHHHHHHHHCCCEEEEEE
Confidence 1 11356889999999999999985431 13467788899999988764
No 206
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.83 E-value=4.9e-09 Score=106.82 Aligned_cols=104 Identities=11% Similarity=0.038 Sum_probs=74.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH--H--cCCCeEEEEeCCCC-CCCCCCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL--E--RGIPSTLGVLGTKR-LPYPSRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~--~--rg~~v~~~~~d~~~-Lp~~d~sFDlVv~s 226 (555)
+.+|||||||+|.++..+++. .|+++|+++..+..++.++.. . ...++.+..+|+.. ++..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 468999999999999999864 578899988877666544322 1 13578899998644 34445789999974
Q ss_pred cccccccc-----chHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 227 RCRIDWLQ-----RDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 227 ~~~l~~~~-----d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
. ..++.. ....+++++.++|+|||.+++.....
T Consensus 171 ~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 171 S-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp C-----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred C-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 3 222121 12578999999999999999986543
No 207
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.82 E-value=1.2e-08 Score=110.02 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=86.9
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCCCC--CCCCCccEEEe--
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP--YPSRSFELAHC-- 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~Lp--~~d~sFDlVv~-- 225 (555)
+.+|||+|||+|..+..|+. ..|+++|+++..+..+..+. ...+. ++.+..+|...++ +++++||+|++
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~-~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~ 338 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFV-KRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDA 338 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH-HHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEEC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHH-HHcCCCcEEEEEcChhhcchhhccCCCCEEEEcC
Confidence 45899999999999999886 36889999988776665433 33344 6888888987776 55578999995
Q ss_pred --c-ccccccccch----------------HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CcEE
Q 008748 226 --S-RCRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKI 285 (555)
Q Consensus 226 --s-~~~l~~~~d~----------------~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-gw~v 285 (555)
+ ...++..++. ..++.++.++|||||.+++++..... .+. -..+..++++. +|++
T Consensus 339 Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~--~en---e~~v~~~l~~~~~~~~ 413 (450)
T 2yxl_A 339 PCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK--EEN---EKNIRWFLNVHPEFKL 413 (450)
T ss_dssp CCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGT---HHHHHHHHHHCSSCEE
T ss_pred CCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh--hhH---HHHHHHHHHhCCCCEE
Confidence 2 2223322221 45899999999999999998865421 222 22455566665 6765
Q ss_pred E
Q 008748 286 V 286 (555)
Q Consensus 286 v 286 (555)
+
T Consensus 414 ~ 414 (450)
T 2yxl_A 414 V 414 (450)
T ss_dssp C
T ss_pred e
Confidence 4
No 208
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.82 E-value=5.4e-09 Score=105.45 Aligned_cols=125 Identities=11% Similarity=0.102 Sum_probs=85.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEeCCCC-CCCCCCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~----rg~~v~~~~~d~~~-Lp~~d~sFDlVv~s 226 (555)
+.+|||||||+|.++..+++. .|+++|+++..+..++..+..- ...++.+..+|... ++..+++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 469999999999999999864 5888899888776665443221 13468899998654 34445789999975
Q ss_pred ccccccccc----hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEE
Q 008748 227 RCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 227 ~~~l~~~~d----~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv 286 (555)
. ..++... ...+++++.++|+|||.+++.....+.. .+....+.+.+++. |..+
T Consensus 156 ~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-F~~v 213 (275)
T 1iy9_A 156 S-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT----PELITNVQRDVKEI-FPIT 213 (275)
T ss_dssp C-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC----HHHHHHHHHHHHTT-CSEE
T ss_pred C-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc----HHHHHHHHHHHHHh-CCCe
Confidence 3 2222211 2569999999999999999976543321 23344555556655 5433
No 209
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.81 E-value=3e-09 Score=109.56 Aligned_cols=105 Identities=11% Similarity=0.025 Sum_probs=71.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEeCCCC-CCCCCCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~----rg~~v~~~~~d~~~-Lp~~d~sFDlVv~s 226 (555)
+.+|||||||+|.++..+++. .|+++|+++..+..++..+... ...++.+..+|+.. ++..+++||+|++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 468999999999999999864 5788888887775555333211 13467888888654 33345789999975
Q ss_pred ccccccccch----HHHHHHHHhhcCCCcEEEEEcCCCC
Q 008748 227 RCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 261 (555)
Q Consensus 227 ~~~l~~~~d~----~~~L~el~RvLkPGG~lvis~P~~~ 261 (555)
. ..++.+.. ..+++++.++|+|||.+++.....+
T Consensus 189 ~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 189 S-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp C-C-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred C-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 4 22222211 5689999999999999999764443
No 210
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.81 E-value=3.6e-09 Score=102.88 Aligned_cols=98 Identities=12% Similarity=0.168 Sum_probs=74.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-CCC--CCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP--SRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p~~--d~sFDlVv~s 226 (555)
..+|||||||+|.++..+++. .|+++|+++..+..+..++. ..+. .+.+..+|.... +.. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK-ALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH-HTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 358999999999999988853 68889998887766654433 3343 588888887653 432 5789999976
Q ss_pred ccccccccchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 227 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 227 ~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
.. . .+...++.++.++|+|||.+++...
T Consensus 134 ~~-~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 134 AA-K---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GG-G---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CC-H---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 53 2 3557799999999999999999753
No 211
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.81 E-value=9.8e-10 Score=108.62 Aligned_cols=98 Identities=10% Similarity=0.022 Sum_probs=74.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-CCC-----CCCccE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP-----SRSFEL 222 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p~~-----d~sFDl 222 (555)
+.+|||||||+|..+..|+.. .|+++|+++.++..+..++. ..+. ++.+.++|+... +.. +++||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR-EAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH-HTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 358999999999999999862 68999999988877764443 3343 689999987543 321 478999
Q ss_pred EEecccccccccchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 223 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 223 Vv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
|++... ..+...++.++.++|||||++++...
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 997642 34456689999999999999998653
No 212
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.80 E-value=7e-09 Score=112.76 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=72.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
..+|||||||+|.++..+++. .|+++|+++ ++..++ +.+...+ .++.+..+|+..++++ ++||+|+|.. .+
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~-~~ 234 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEP-MG 234 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCC-CH
T ss_pred CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeC-ch
Confidence 468999999999999988864 688899887 664444 3344444 3589999999888776 5899999865 33
Q ss_pred cccc--chHHHHHHHHhhcCCCcEEEEE
Q 008748 231 DWLQ--RDGILLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 231 ~~~~--d~~~~L~el~RvLkPGG~lvis 256 (555)
++.. +....+.++.++|||||++++.
T Consensus 235 ~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4432 3345677899999999999963
No 213
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.79 E-value=5.6e-09 Score=106.98 Aligned_cols=106 Identities=12% Similarity=0.093 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEeCCCC-CCCCCCCccEEEe
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHC 225 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~----rg~~v~~~~~d~~~-Lp~~d~sFDlVv~ 225 (555)
.+.+|||||||+|.++..++++ .++++|+++.++..++..+..- ...++.+..+|+.. ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 3469999999999999999864 5888999888776665443321 14568888888654 3445678999997
Q ss_pred ccccccccc----chHHHHHHHHhhcCCCcEEEEEcCCCC
Q 008748 226 SRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAY 261 (555)
Q Consensus 226 s~~~l~~~~----d~~~~L~el~RvLkPGG~lvis~P~~~ 261 (555)
.. ..++.+ ....+++++.++|+|||.+++.....+
T Consensus 175 d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 175 DS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp EC-C-----------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcc
Confidence 53 232221 124589999999999999999764433
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.78 E-value=4e-09 Score=108.36 Aligned_cols=122 Identities=12% Similarity=0.104 Sum_probs=83.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH-Hc----CCCeEEEEeCCCC-CCCCCCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL-ER----GIPSTLGVLGTKR-LPYPSRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~-~r----g~~v~~~~~d~~~-Lp~~d~sFDlVv~ 225 (555)
+.+|||||||+|.++..+++. .++++|+++..+..++..+.. .. ..++.+..+|+.. ++..+++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 469999999999999999864 588999998887666644432 11 3568899998655 3444678999998
Q ss_pred ccccccc---cc--c--hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc
Q 008748 226 SRCRIDW---LQ--R--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 281 (555)
Q Consensus 226 s~~~l~~---~~--d--~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~ 281 (555)
.. ..++ .+ . ...+++++.++|+|||.+++.....+... .+....+.+.+++.
T Consensus 158 d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~~l~~~ 216 (314)
T 1uir_A 158 DL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTH---HRVHPVVHRTVREA 216 (314)
T ss_dssp EC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC------CHHHHHHHHHHTT
T ss_pred CC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccC---HHHHHHHHHHHHHH
Confidence 65 3443 11 1 25789999999999999998653322111 12344455555554
No 215
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.77 E-value=5.3e-09 Score=107.24 Aligned_cols=99 Identities=15% Similarity=0.158 Sum_probs=67.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC-CCccccC----ChhhhhHHHHHHHHHcC-CCeEEEEe-CCCCCCCCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-DIIAMSL----APNDVHENQIQFALERG-IPSTLGVL-GTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-~V~~vdi----s~~dls~a~i~~A~~rg-~~v~~~~~-d~~~Lp~~d~sFDlVv~s~~ 228 (555)
..+|||||||+|.++..++++ .|+++|+ +..++.... ....+ ..+.+.++ |+..++ .++||+|+|..+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 368999999999999999885 6889988 343221110 01111 34677777 776665 468999998653
Q ss_pred c--cccccchH---HHHHHHHhhcCCCcEEEEEcCC
Q 008748 229 R--IDWLQRDG---ILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 229 ~--l~~~~d~~---~~L~el~RvLkPGG~lvis~P~ 259 (555)
. .++..+.. .+|.++.++|||||.|++....
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 2 12332322 4789999999999999986654
No 216
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.77 E-value=9.1e-09 Score=108.68 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=88.7
Q ss_pred CEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEeCCCC-CCC---CCCCccEEEec
Q 008748 157 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKR-LPY---PSRSFELAHCS 226 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~---~v~~~~~d~~~-Lp~---~d~sFDlVv~s 226 (555)
.+|||+|||+|.++..++.. .|+++|+++.++..+..+... .+. ++.+..+|+.. ++. ..++||+|++.
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~-n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA-NHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH-TTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 58999999999999999863 689999999998877755443 343 68899998654 221 24589999974
Q ss_pred ccc--------cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEE
Q 008748 227 RCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 227 ~~~--------l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv 286 (555)
... .....+...++.++.++|+|||+++++...... .....++.+...+...|+.++
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~---~~~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM---TVSQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS---CHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC---CHHHHHHHHHHHHHHcCCcEE
Confidence 321 122233345788889999999999998765321 111345566677788888743
No 217
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.77 E-value=6.9e-09 Score=104.25 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=76.4
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCCCCC----CCCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY----PSRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~Lp~----~d~sFDlVv~ 225 (555)
..+|||+|||+|..+..|++ ..|+++|+++..+..+..+. ...+. ++.+..+|+..++. .+++||+|++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~-~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNI-NRMGVLNTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHH-HHhCCCcEEEEeCChHhcchhhhhccccCCEEEE
Confidence 46899999999999988885 36889999988876655433 33444 68888888776654 2578999997
Q ss_pred ccc-----ccc------------cccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 226 SRC-----RID------------WLQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 226 s~~-----~l~------------~~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
... .++ +......++.++.++|||||.+++++...
T Consensus 163 d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 521 111 11334678999999999999999988654
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.77 E-value=5e-09 Score=108.11 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=80.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH----HcCCCeEEEEeCCCC-CCCCCCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL----ERGIPSTLGVLGTKR-LPYPSRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~----~rg~~v~~~~~d~~~-Lp~~d~sFDlVv~s 226 (555)
+.+|||||||+|.++..+++. .|+++|+++..+..++.++.. -...++.+..+|... ++..+++||+|++.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 468999999999999999864 578888888776555533221 013468888888644 23335789999975
Q ss_pred cccccccc--ch--HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc
Q 008748 227 RCRIDWLQ--RD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 281 (555)
Q Consensus 227 ~~~l~~~~--d~--~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~ 281 (555)
. ..++.+ .. ..+++++.++|+|||.+++.....+.. .+....+.+.+++.
T Consensus 197 ~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 197 S-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH----VGTIKNMIGYAKKL 250 (321)
T ss_dssp C-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHTT
T ss_pred C-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC----HHHHHHHHHHHHHH
Confidence 4 222211 11 578999999999999999976543322 12334444555554
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.76 E-value=5e-09 Score=106.04 Aligned_cols=106 Identities=14% Similarity=0.133 Sum_probs=74.1
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEeCCCCC-CCCCCCccEEEe
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRL-PYPSRSFELAHC 225 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~----rg~~v~~~~~d~~~L-p~~d~sFDlVv~ 225 (555)
++.+|||||||+|.++..+++. .++++|+++..+..+...+... ...++.+.++|.... +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 3469999999999999999864 5778888777665444322110 134678888886542 223578999997
Q ss_pred cccccccccc--h--HHHHHHHHhhcCCCcEEEEEcCCCC
Q 008748 226 SRCRIDWLQR--D--GILLLELDRLLRPGGYFVYSSPEAY 261 (555)
Q Consensus 226 s~~~l~~~~d--~--~~~L~el~RvLkPGG~lvis~P~~~ 261 (555)
.. ..++... . ..+++++.++|+|||.+++.....+
T Consensus 158 d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 158 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 196 (283)
T ss_dssp EC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred cC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcc
Confidence 43 2333222 1 5799999999999999999876543
No 220
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.76 E-value=3.7e-08 Score=99.74 Aligned_cols=166 Identities=12% Similarity=0.108 Sum_probs=107.8
Q ss_pred cCceeeeCCCCCCCCccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHH
Q 008748 115 NGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHEN 191 (555)
Q Consensus 115 ~~e~~~F~~~g~~f~~~a~~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a 191 (555)
.|-++.|.-....|..+...-...+.+++. ++.+|||+|||+|.++..++. ..|+++|+++..+..+
T Consensus 95 ~G~~~~~D~~k~~f~~~~~~er~ri~~~~~----------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~ 164 (278)
T 3k6r_A 95 NGIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFL 164 (278)
T ss_dssp TTEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHH
T ss_pred CCEEEEEeccceEEcCCcHHHHHHHHHhcC----------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHH
Confidence 344555555556666666555555666553 246899999999999988875 3689999999888666
Q ss_pred HHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHH
Q 008748 192 QIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR 269 (555)
Q Consensus 192 ~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~ 269 (555)
..+.. ..+. .+.+..+|...++. .+.||.|++.. . .....++..+.++||+||++.+..-..-... ...
T Consensus 165 ~~N~~-~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~--p---~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~--~~~ 235 (278)
T 3k6r_A 165 VENIH-LNKVEDRMSAYNMDNRDFPG-ENIADRILMGY--V---VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM--PRE 235 (278)
T ss_dssp HHHHH-HTTCTTTEEEECSCTTTCCC-CSCEEEEEECC--C---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--TTT
T ss_pred HHHHH-HcCCCCcEEEEeCcHHHhcc-ccCCCEEEECC--C---CcHHHHHHHHHHHcCCCCEEEEEeeeccccc--chh
Confidence 65444 3343 47888899887764 47899998653 2 2234578889999999999876331100000 011
Q ss_pred HHHHHHHHHHhcCcEEEEEeeceEEeecCC
Q 008748 270 IWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 299 (555)
Q Consensus 270 ~~~~l~~l~~~~gw~vv~~~~~~~iw~KPl 299 (555)
..+.++++++..|+++........-+-.|-
T Consensus 236 ~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP~ 265 (278)
T 3k6r_A 236 PFETFKRITKEYGYDVEKLNELKIKRYAPG 265 (278)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEEEEETTT
T ss_pred HHHHHHHHHHHcCCcEEEEEEEEEEeECcC
Confidence 345677888999998754443333333443
No 221
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.75 E-value=8.3e-09 Score=100.91 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=71.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCC-CC-------------
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LP------------- 214 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~-Lp------------- 214 (555)
..+|||||||+|.++..++.. .++++|+++..+..++..+. +.+. .+.+..+|... ++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWK-ENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 358999999999999988753 68889998887766654433 3333 37888887533 22
Q ss_pred -CCC--CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 215 -YPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 215 -~~d--~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
|++ ++||+|++... ..+...++.++.++|+|||++++..
T Consensus 140 ~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999997652 2344678999999999999999975
No 222
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.75 E-value=8.3e-09 Score=100.88 Aligned_cols=97 Identities=20% Similarity=0.169 Sum_probs=72.6
Q ss_pred CEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCC----CCCCCC--CCccEE
Q 008748 157 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTK----RLPYPS--RSFELA 223 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~----~Lp~~d--~sFDlV 223 (555)
.+|||||||+|.++..|+.. .++++|+++..+..+...+.. .+. .+.+..+|+. .++..+ ++||+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQK-AGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 58999999999999999863 588899988877666644433 333 4788888853 233333 789999
Q ss_pred EecccccccccchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 224 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 224 v~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
++... ..+...++.++.++|+|||++++...
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 96642 24456789999999999999999653
No 223
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.74 E-value=1.5e-08 Score=106.88 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=73.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEec--cc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCS--RC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s--~~ 228 (555)
.++|||||||+|.++..++++ .|+++|.++ ++..+ .+.++..+. .+.++.++++.+.++ +.||+|+|- ..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a-~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQA-REVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHH-HHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHH-HHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 358999999999998887764 699999986 44444 355555553 588999999988887 679999972 12
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEE
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVY 255 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvi 255 (555)
.+.+......++....|.|||||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 344444557788899999999999883
No 224
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.73 E-value=5.9e-09 Score=103.33 Aligned_cols=97 Identities=12% Similarity=0.093 Sum_probs=73.2
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-C-C-----CCCCcc
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-Y-----PSRSFE 221 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p-~-----~d~sFD 221 (555)
+.+|||||||+|..+..|+. ..++++|+++.++..+..++. +.+. ++.+..+|+... + + ++++||
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIK-KAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 35899999999999998875 368899999988866664443 3343 578888886442 3 2 157899
Q ss_pred EEEecccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 222 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 222 lVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
+|++... ..+...++.++.++|||||++++..
T Consensus 159 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9997542 2345678999999999999999854
No 225
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.72 E-value=3.2e-08 Score=100.20 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=72.7
Q ss_pred CEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCc---cEEEeccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSF---ELAHCSRC 228 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sF---DlVv~s~~ 228 (555)
.+|||+|||+|.++..++.. .|+++|+++.++..+..+. ...+. ++.+..+|.... ++ ++| |+|+++-.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~-~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNA-ERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPP 201 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHH-HHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCC
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCC
Confidence 58999999999999988853 6889999998887776444 33444 388999997652 23 578 99998621
Q ss_pred ccc----------ccc--------chHHHHHHHH-hhcCCCcEEEEEcCC
Q 008748 229 RID----------WLQ--------RDGILLLELD-RLLRPGGYFVYSSPE 259 (555)
Q Consensus 229 ~l~----------~~~--------d~~~~L~el~-RvLkPGG~lvis~P~ 259 (555)
.+. |.+ +...+++++. +.|+|||++++..+.
T Consensus 202 yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 202 YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 010 111 1226899999 999999999997654
No 226
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.72 E-value=7.1e-09 Score=104.76 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=72.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHH-----------cCCCeEEEEeCCCC-CCCCCCCc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE-----------RGIPSTLGVLGTKR-LPYPSRSF 220 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~-----------rg~~v~~~~~d~~~-Lp~~d~sF 220 (555)
+.+|||||||+|.++..+++. .++++|+++..+..++..+ .. ...++.+..+|... ++. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 468999999999999999864 6888888888776665443 11 23467888888643 222 5789
Q ss_pred cEEEeccccccccc--c--hHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 221 ELAHCSRCRIDWLQ--R--DGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 221 DlVv~s~~~l~~~~--d--~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
|+|++.. ..++.. . ...+++++.++|+|||.+++....
T Consensus 154 D~Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 154 DVIIADS-TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEC-CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999754 222221 1 256899999999999999997543
No 227
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.71 E-value=5e-09 Score=108.02 Aligned_cols=101 Identities=14% Similarity=0.181 Sum_probs=70.9
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC--CCCCCCccEEEeccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRCRI 230 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L--p~~d~sFDlVv~s~~~l 230 (555)
.+|||||||+|.++..+++. .++++|+++..+..++..+......++.+.++|...+ .+++++||+|++.. ..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~-~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV-FA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC-ST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC-CC
Confidence 48999999999999999872 5677777776664444332211234688999996544 34567899999743 12
Q ss_pred ccc-c---chHHHHHHHHhhcCCCcEEEEEcC
Q 008748 231 DWL-Q---RDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 231 ~~~-~---d~~~~L~el~RvLkPGG~lvis~P 258 (555)
+.. . ....+++++.++|+|||+|++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 211 1 125799999999999999998664
No 228
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.71 E-value=4.3e-08 Score=98.11 Aligned_cols=131 Identities=10% Similarity=0.047 Sum_probs=91.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
+.+|||||||+|-++..++.. .++++|+++.++.-... ++...+.+..+.+.|...-+. .+.||+|++.- ++|
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~-~l~~~g~~~~~~v~D~~~~~p-~~~~DvaL~lk-ti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDE-ALTRLNVPHRTNVADLLEDRL-DEPADVTLLLK-TLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHH-HHHHTTCCEEEEECCTTTSCC-CSCCSEEEETT-CHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeeecccCC-CCCcchHHHHH-HHH
Confidence 569999999999999888653 78999999988866663 334457888899888765554 47799999666 788
Q ss_pred cccchHH-HHHHHHhhcCCCcEEEEEcCC-CCCCChhhHHHH-HHHHHHHHhcCcEEEEEe
Q 008748 232 WLQRDGI-LLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 232 ~~~d~~~-~L~el~RvLkPGG~lvis~P~-~~~~~~e~~~~~-~~l~~l~~~~gw~vv~~~ 289 (555)
+.++..+ ..-++.+.|+|+|.++-..-. ...+.+...+.+ ..+++.+.+.||.+...+
T Consensus 210 ~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 210 CLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeee
Confidence 8866532 333999999999988853321 222334444434 467888998999554433
No 229
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.70 E-value=1.4e-08 Score=106.91 Aligned_cols=125 Identities=13% Similarity=0.039 Sum_probs=85.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCC----CCCCccEEEecccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY----PSRSFELAHCSRCR 229 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~----~d~sFDlVv~s~~~ 229 (555)
..+|||+|||+|.++..++.. .|+++|+++.++..+..+.......++.+..+|+..+.. .+++||+|++.-..
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 358999999999999998863 789999999888777655443332348899888755421 24689999974311
Q ss_pred --------cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCc
Q 008748 230 --------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 283 (555)
Q Consensus 230 --------l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw 283 (555)
.........++.++.++|+|||++++++..... .. ......+.+.+...|.
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~--~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 290 FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHM-TE--PLFYAMVAEAAQDAHR 348 (382)
T ss_dssp SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-CH--HHHHHHHHHHHHHTTC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC-CH--HHHHHHHHHHHHHcCC
Confidence 111234466899999999999999998765321 11 1123344556667764
No 230
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.68 E-value=5.3e-08 Score=104.15 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=87.0
Q ss_pred CCEEEEECCCCcHHHHHHhc----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC--CCCCCccEEEe----
Q 008748 156 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHC---- 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp--~~d~sFDlVv~---- 225 (555)
+.+|||+|||+|..+..+++ ..|+++|+++..+..+..+ +...+.++.+..+|...++ +++++||+|++
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~-~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN-LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHH-HHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-HHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 46899999999999999886 3689999999887666533 3445667888899988776 56678999995
Q ss_pred cc-cccccccch----------------HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CcEEE
Q 008748 226 SR-CRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 286 (555)
Q Consensus 226 s~-~~l~~~~d~----------------~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-gw~vv 286 (555)
+. ..++..++. ..++.++.++|||||++++++..... .+.. ..+..++++. +|+++
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~--~ene---~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP--EENS---LQIKAFLQRTADAELC 399 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG--GGTH---HHHHHHHHHCTTCEEC
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh--hhHH---HHHHHHHHhCCCCEEe
Confidence 22 122222221 36799999999999999998855421 1221 2344555554 57654
No 231
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.68 E-value=4.4e-08 Score=103.89 Aligned_cols=126 Identities=13% Similarity=-0.007 Sum_probs=84.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC-CCCCCCccEEEecccccc-
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRID- 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L-p~~d~sFDlVv~s~~~l~- 231 (555)
+.+|||+|||+|.++..++.. .|+++|+++.++..+..+.. ..+....+.++|+..+ +...+.||+|++.-..+.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~-~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAAL-RLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHH-HhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 468999999999999999863 58999999998877775544 4455556778886543 221344999997532111
Q ss_pred -------cccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEE
Q 008748 232 -------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 285 (555)
Q Consensus 232 -------~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~v 285 (555)
...+...++..+.++|+|||++++++..... ......+.+...+...|...
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~---~~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL---RLEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS---CHHHHHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC---CHHHHHHHHHHHHHHhCCeE
Confidence 1123356899999999999999977654321 11123345556666666543
No 232
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.68 E-value=1.1e-07 Score=98.54 Aligned_cols=94 Identities=12% Similarity=0.107 Sum_probs=72.8
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++.. +.. .|+++|+++.++..++.+.. ..+. ++.+..+|+..+. ++||+|++.. ..
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~-~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dp--P~ 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIK-LNKLEHKIIPILSDVREVD---VKGNRVIMNL--PK 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHH-HTTCTTTEEEEESCGGGCC---CCEEEEEECC--TT
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECChHHhc---CCCcEEEECC--cH
Confidence 35899999999999999 753 68899999988877765444 3343 5899999987765 7899999753 11
Q ss_pred cccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 232 WLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 232 ~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+ ...++.++.++|+|||.+++....
T Consensus 269 ~---~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 269 F---AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp T---GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred h---HHHHHHHHHHHcCCCCEEEEEEee
Confidence 1 236899999999999999986644
No 233
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.67 E-value=1e-08 Score=98.99 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=72.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCCC-C-CC--C--CCccE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRL-P-YP--S--RSFEL 222 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~L-p-~~--d--~sFDl 222 (555)
..+|||||||+|.++..++.. .++++|+++..+..+...+. ..+ .++.+..+|+... + +. . ++||+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWR-QAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHH-HTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 358999999999999999863 68899999888766664433 334 3688888886432 1 11 1 68999
Q ss_pred EEecccccccccchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 223 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 223 Vv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
|++... ..+...++.++.++|+|||.+++...
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 997542 23446789999999999999998653
No 234
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.66 E-value=2.1e-08 Score=100.61 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=70.3
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHH----HcCCCeEEEEeCCCCCCCCCCCccEEEeccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFAL----ERGIPSTLGVLGTKRLPYPSRSFELAHCSRC 228 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~----~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~ 228 (555)
.+++|||||||+|.++..++.. .|+++|+++.++..+...+.. -...++.+..+|..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 3469999999999999988864 577788877766544322211 11346888888876654 7899999652
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
.++..+++++.++|+|||.+++....
T Consensus 148 -----~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 148 -----EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp -----CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 24456899999999999999996543
No 235
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.66 E-value=6.8e-08 Score=109.67 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=87.3
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeCCCC-CCCCCCCccEEEeccc-
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKR-LPYPSRSFELAHCSRC- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d~~~-Lp~~d~sFDlVv~s~~- 228 (555)
+.+|||+|||+|.++..++.. .|+++|+++.++..+..+.+.... .++.+.++|+.. ++...++||+|++.-.
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 358999999999999998853 489999999998877755544332 258899999655 4445578999997432
Q ss_pred ---------ccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEE
Q 008748 229 ---------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 286 (555)
Q Consensus 229 ---------~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv 286 (555)
..+...+...++.++.++|+|||+|+++......... .+.+++.|++..
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---------~~~l~~~g~~~~ 677 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---------LDGLAKLGLKAQ 677 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---------HHHHHHTTEEEE
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---------HHHHHHcCCcee
Confidence 1233345567899999999999999998865321111 345567787643
No 236
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.65 E-value=3.4e-07 Score=98.10 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=81.9
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEeCCCC----CCCCCCCccEEEeccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKR----LPYPSRSFELAHCSRC 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~-~v~~~~~d~~~----Lp~~d~sFDlVv~s~~ 228 (555)
..+|||+|||+|.++..|+.. .|+++|+++.++..+..+. ...+. ++.+..+|+.. +++++++||+|++.-.
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~-~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPP 365 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNA-RLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPA 365 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCC
T ss_pred CCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHH-HHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCC
Confidence 358999999999999999974 7899999998887776444 33443 68999999766 3456678999997532
Q ss_pred ccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 229 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 229 ~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
+..- ..+++.+. .++|++.++++..+ ..+.+-...+.+.||.+....
T Consensus 366 ---r~g~-~~~~~~l~-~~~p~~ivyvsc~p---------~tlard~~~l~~~Gy~~~~~~ 412 (433)
T 1uwv_A 366 ---RAGA-AGVMQQII-KLEPIRIVYVSCNP---------ATLARDSEALLKAGYTIARLA 412 (433)
T ss_dssp ---TTCC-HHHHHHHH-HHCCSEEEEEESCH---------HHHHHHHHHHHHTTCEEEEEE
T ss_pred ---CccH-HHHHHHHH-hcCCCeEEEEECCh---------HHHHhhHHHHHHCCcEEEEEE
Confidence 2111 23555554 37899988886532 122222344566799887643
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.65 E-value=6e-08 Score=96.11 Aligned_cols=131 Identities=16% Similarity=0.079 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCcHHHHHHhc-CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLS-HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~-~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
.+.+|||||||+|.++..+.. ..++++||++.++.-+... +...+.+..+.++|....+.+ ++||+|++.- ++|+.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~-~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk-~lh~L 181 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPF-AREKDWDFTFALQDVLCAPPA-EAGDLALIFK-LLPLL 181 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHH-HHHTTCEEEEEECCTTTSCCC-CBCSEEEEES-CHHHH
T ss_pred CCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHH-HHhcCCCceEEEeecccCCCC-CCcchHHHHH-HHHHh
Confidence 457999999999999998773 4789999999888666533 445578889999998877766 4899999665 67887
Q ss_pred cchHH-HHHHHHhhcCCCcEEEEEcC--CCCCCChhhHHHH-HHHHHHHHhcCcEEEEEe
Q 008748 234 QRDGI-LLLELDRLLRPGGYFVYSSP--EAYAHDPENRRIW-NAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 234 ~d~~~-~L~el~RvLkPGG~lvis~P--~~~~~~~e~~~~~-~~l~~l~~~~gw~vv~~~ 289 (555)
++.+. ...++.+.|+++|.++- .| ....+.+...+.| ..+++.+.+..|.+.+.+
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVs-fPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~ 240 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVS-FPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKT 240 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEE-EECC-----------CHHHHHHHHSCTTEEEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEE-cChHHhcCCCcchhhHHHHHHHHHhhccchhhhhee
Confidence 55422 44488889999976664 34 2222222222323 245566666666554433
No 238
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.64 E-value=2.4e-08 Score=108.04 Aligned_cols=126 Identities=21% Similarity=0.192 Sum_probs=86.0
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC-CCCCCccEEEe----
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-YPSRSFELAHC---- 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp-~~d~sFDlVv~---- 225 (555)
+.+|||+|||+|..+..|++ ..|+++|+++.++..+..+. ...+..+.+..+|...++ +.+++||+|++
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~-~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENV-ERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH-HHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 46899999999999999884 25889999998886666444 334555888888876665 34578999994
Q ss_pred ccc-ccccccc----------------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhc-CcEEEE
Q 008748 226 SRC-RIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIVS 287 (555)
Q Consensus 226 s~~-~l~~~~d----------------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~-gw~vv~ 287 (555)
+.. .+...++ ...+|.++.++|||||+|++++-.... .+.. ..+..++++. +|+++.
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~--eEne---~vv~~~l~~~~~~~l~~ 255 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP--EENE---GVVAHFLKAHPEFRLED 255 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGTH---HHHHHHHHHCTTEEEEC
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch--hcCH---HHHHHHHHHCCCcEEEe
Confidence 211 1211111 155899999999999999998755321 2222 3455666666 576653
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.63 E-value=2.5e-08 Score=105.32 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=86.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCCCC----CCCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPY----PSRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~Lp~----~d~sFDlVv~s 226 (555)
..+|||+|||+|.++..++.. .|+++|+++.++..+..+.. ..+. ++.+..+|+..+.. ..++||+|++.
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~-~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAK-LNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 468999999999999999864 68999999988877765443 3444 68899998755421 25689999974
Q ss_pred ccc--------cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEE
Q 008748 227 RCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 285 (555)
Q Consensus 227 ~~~--------l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~v 285 (555)
... .+...+...++.++.++|+|||.+++++..... .. ......+.+.+...|...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV-DL--QMFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS-CH--HHHHHHHHHHHHHTTEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCC-CH--HHHHHHHHHHHHHcCCeE
Confidence 311 112234466899999999999999998765321 11 122334445666666544
No 240
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.63 E-value=4.7e-08 Score=103.32 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=86.3
Q ss_pred CEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEeCCCCCCC----CCCCccEEEec
Q 008748 157 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPY----PSRSFELAHCS 226 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~rg~---~v~~~~~d~~~Lp~----~d~sFDlVv~s 226 (555)
.+|||+|||+|.++..++.. .|+++|+++..+..+..+.. ..+. ++.+..+|+..+.. ..++||+|++.
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~-~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVE-LNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 58999999999999999864 68999999988877765443 3454 68899998655421 14689999975
Q ss_pred ccc--------cccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEE
Q 008748 227 RCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 285 (555)
Q Consensus 227 ~~~--------l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~v 285 (555)
-.. .........++.++.++|+|||+++++....... . ......+.+.+.+.|+..
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~--~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-S--DLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-H--HHHHHHHHHHHHHHTCCE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-H--HHHHHHHHHHHHHcCCeE
Confidence 311 1122344678999999999999999987553211 1 122334455677777533
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.63 E-value=6e-08 Score=100.45 Aligned_cols=122 Identities=14% Similarity=0.196 Sum_probs=85.9
Q ss_pred CCCEEEEECCCCcHHHHHHhc---------CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEe
Q 008748 155 NIRNVLDVGCGVASFGAYLLS---------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHC 225 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~---------~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~ 225 (555)
...+|||+|||+|.++..+++ ..++|+|+++..+..+..+... .+..+.+..+|+... ...+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~-~g~~~~i~~~D~l~~-~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADL-QRQKMTLLHQDGLAN-LLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHH-HTCCCEEEESCTTSC-CCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHh-CCCCceEEECCCCCc-cccCCccEEEE
Confidence 346899999999999887763 3578899988887766655443 355788888886553 34578999998
Q ss_pred cccccccccch------------------HHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCc
Q 008748 226 SRCRIDWLQRD------------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 283 (555)
Q Consensus 226 s~~~l~~~~d~------------------~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw 283 (555)
+. .+++.... ..++..+.+.|+|||+++++.|..+..... ...+.+.+.+.++
T Consensus 208 NP-Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~----~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 208 DL-PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNGH 278 (344)
T ss_dssp EC-CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHEE
T ss_pred CC-CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch----HHHHHHHHHhCCe
Confidence 75 33333211 147999999999999999998875332222 2456666666666
No 242
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.62 E-value=6.5e-08 Score=105.14 Aligned_cols=122 Identities=18% Similarity=0.113 Sum_probs=83.1
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCC-CCCCccEEEe----
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-PSRSFELAHC---- 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~-~d~sFDlVv~---- 225 (555)
+.+|||+|||+|..+..|++ ..|+++|+++..+..+..+..+....++.+..+|...++. .+++||+|++
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 46899999999999998886 2688999999888666644433322368888889887753 4578999996
Q ss_pred cc-cccccccc----------------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcC
Q 008748 226 SR-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC 282 (555)
Q Consensus 226 s~-~~l~~~~d----------------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~g 282 (555)
+. ..+...++ ...+|.++.++|||||+|++++-..... +.. ..+..++++.+
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~--Ene---~vv~~~l~~~~ 266 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE--ENE---AVCLWLKETYP 266 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST--TTH---HHHHHHHHHST
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc--cCH---HHHHHHHHHCC
Confidence 21 11211111 1358999999999999999987654322 221 23455566554
No 243
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.61 E-value=7.8e-08 Score=97.33 Aligned_cols=109 Identities=19% Similarity=0.169 Sum_probs=73.2
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEeC
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLG 209 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg--~~v~~~~~d 209 (555)
...+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++..+..+. ...+ .++.+..+|
T Consensus 15 ~i~~~i~~~~~~--------~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~D 85 (285)
T 1zq9_A 15 LIINSIIDKAAL--------RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRV-QGTPVASKLQVLVGD 85 (285)
T ss_dssp HHHHHHHHHTCC--------CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEESC
T ss_pred HHHHHHHHhcCC--------CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEEcc
Confidence 345555555543 23468999999999999999863 7889999888775555332 2222 368899999
Q ss_pred CCCCCCCCCCccEEEecccccccccchH-HHH--------------HHH--HhhcCCCcEEE
Q 008748 210 TKRLPYPSRSFELAHCSRCRIDWLQRDG-ILL--------------LEL--DRLLRPGGYFV 254 (555)
Q Consensus 210 ~~~Lp~~d~sFDlVv~s~~~l~~~~d~~-~~L--------------~el--~RvLkPGG~lv 254 (555)
+..++++ +||+|+++. ..++..+.- .++ +|+ +++|+|||.++
T Consensus 86 ~~~~~~~--~fD~vv~nl-py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 86 VLKTDLP--FFDTCVANL-PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp TTTSCCC--CCSEEEEEC-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred eecccch--hhcEEEEec-CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9888776 799999754 344433221 122 344 36999999874
No 244
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.60 E-value=1.1e-07 Score=100.45 Aligned_cols=129 Identities=14% Similarity=0.153 Sum_probs=88.1
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEe
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVL 208 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~ 208 (555)
...+.+.+.+.. ....+|||+|||+|.++..+++ ..++|+|+++.++..+ .++.+..+
T Consensus 26 ~l~~~~~~~~~~--------~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~ 88 (421)
T 2ih2_A 26 EVVDFMVSLAEA--------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILA 88 (421)
T ss_dssp HHHHHHHHHCCC--------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEES
T ss_pred HHHHHHHHhhcc--------CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeC
Confidence 345556665542 1235899999999999999885 3688999988776433 46788889
Q ss_pred CCCCCCCCCCCccEEEeccccc--cc-------c-cc------------------hHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 209 GTKRLPYPSRSFELAHCSRCRI--DW-------L-QR------------------DGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 209 d~~~Lp~~d~sFDlVv~s~~~l--~~-------~-~d------------------~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
|+...+. .++||+|+++--.. .. . .+ ...++..+.++|+|||.++++.|..
T Consensus 89 D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 89 DFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp CGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred ChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 9776653 46899999852111 00 1 11 1256899999999999999999875
Q ss_pred CCCChhhHHHHHHHHHHHHhcCcE
Q 008748 261 YAHDPENRRIWNAMYDLLKSMCWK 284 (555)
Q Consensus 261 ~~~~~e~~~~~~~l~~l~~~~gw~ 284 (555)
+..... ...+.+.+.+.++.
T Consensus 168 ~l~~~~----~~~lr~~l~~~~~~ 187 (421)
T 2ih2_A 168 WLVLED----FALLREFLAREGKT 187 (421)
T ss_dssp GGTCGG----GHHHHHHHHHHSEE
T ss_pred HhcCcc----HHHHHHHHHhcCCe
Confidence 433222 34567777777773
No 245
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.59 E-value=2.5e-08 Score=97.93 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=72.5
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC--CeEEEEeCCCCC-C-C-----CCCCcc
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-Y-----PSRSFE 221 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~--~v~~~~~d~~~L-p-~-----~d~sFD 221 (555)
+++|||||||+|..+..++. ..++++|+++..+..+..++. +.+. .+.+..+|+... + + ++++||
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIR-KAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 35899999999999998874 368899999888766664443 3444 478888886432 2 2 257899
Q ss_pred EEEecccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 222 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 222 lVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
+|++.. ...+...++.++.++|+|||++++..
T Consensus 150 ~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999654 23345678999999999999999864
No 246
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.55 E-value=5e-08 Score=99.39 Aligned_cols=111 Identities=13% Similarity=0.038 Sum_probs=76.0
Q ss_pred CCEEEEECC------CCcH-HHHHHhc--CCCccccCChhhhhHHHHHHHHHcCCCeEE-EEeCCCCCCCCCCCccEEEe
Q 008748 156 IRNVLDVGC------GVAS-FGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTL-GVLGTKRLPYPSRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGC------GtG~-~a~~La~--~~V~~vdis~~dls~a~i~~A~~rg~~v~~-~~~d~~~Lp~~d~sFDlVv~ 225 (555)
..+|||+|| |+|. .++.+.. ..|+++|+++. + .++.+ .++|+..++++ ++||+|+|
T Consensus 64 g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v------------~~v~~~i~gD~~~~~~~-~~fD~Vvs 129 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V------------SDADSTLIGDCATVHTA-NKWDLIIS 129 (290)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B------------CSSSEEEESCGGGCCCS-SCEEEEEE
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C------------CCCEEEEECccccCCcc-CcccEEEE
Confidence 468999999 4465 2222222 36899999886 1 25677 89999888765 68999997
Q ss_pred cccccccc-----------cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 226 SRCRIDWL-----------QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 226 s~~~l~~~-----------~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.. ..++. .....+++++.|+|||||.|++....... ..++..++++.||..+...
T Consensus 130 n~-~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--------~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 130 DM-YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------NADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp CC-CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------CHHHHHHHTTEEEEEEEEE
T ss_pred cC-CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--------HHHHHHHHHHcCCcEEEEE
Confidence 53 22211 11246899999999999999997644311 2367778888888765443
No 247
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.55 E-value=5.7e-08 Score=104.85 Aligned_cols=127 Identities=13% Similarity=0.026 Sum_probs=86.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC-CCCCCccEEEecc--
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-YPSRSFELAHCSR-- 227 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp-~~d~sFDlVv~s~-- 227 (555)
+.+|||+|||+|..+..|++. .|+++|+++..+..+..+..+....++.+...|...++ ..+++||+|++.-
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 468999999999999888752 58899999988866665444333335777778876654 2347899999621
Q ss_pred --c-ccccccc----------------hHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEE
Q 008748 228 --C-RIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 287 (555)
Q Consensus 228 --~-~l~~~~d----------------~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~ 287 (555)
. .+...++ ...+|.++.++|||||+|++++-.... .+. -..+..++++.+|+++.
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~--eEn---e~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP--EEN---EEIISWLVENYPVTIEE 259 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG--GGT---HHHHHHHHHHSSEEEEC
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc--ccC---HHHHHHHHHhCCCEEEe
Confidence 1 1111111 125799999999999999998755321 222 23566778888876653
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.53 E-value=2.9e-07 Score=93.81 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=59.0
Q ss_pred HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCC
Q 008748 135 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR 212 (555)
Q Consensus 135 y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~ 212 (555)
..+.+.+.+.. ....+|||||||+|.++..|++. .|+++|+++.++..+..+.......++.+..+|+..
T Consensus 30 i~~~i~~~~~~--------~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~ 101 (299)
T 2h1r_A 30 ILDKIIYAAKI--------KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIK 101 (299)
T ss_dssp HHHHHHHHHCC--------CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCS
T ss_pred HHHHHHHhcCC--------CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhh
Confidence 44555555542 23468999999999999999974 689999999888666644432222468889999888
Q ss_pred CCCCCCCccEEEeccccccc
Q 008748 213 LPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 213 Lp~~d~sFDlVv~s~~~l~~ 232 (555)
++++ +||+|+++. ..++
T Consensus 102 ~~~~--~~D~Vv~n~-py~~ 118 (299)
T 2h1r_A 102 TVFP--KFDVCTANI-PYKI 118 (299)
T ss_dssp SCCC--CCSEEEEEC-CGGG
T ss_pred CCcc--cCCEEEEcC-Cccc
Confidence 7764 799999754 3444
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.48 E-value=1e-06 Score=94.28 Aligned_cols=96 Identities=16% Similarity=0.220 Sum_probs=70.7
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
..+|||+|||+|.++..|++. .|+++|+++.++..+..+.. ..+..+.+..+|+..+... +||+|++... ..
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~-~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPP---r~ 364 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVE-INNVDAEFEVASDREVSVK--GFDTVIVDPP---RA 364 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHTCCEEEEECCTTTCCCT--TCSEEEECCC---TT
T ss_pred CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-HcCCcEEEEECChHHcCcc--CCCEEEEcCC---cc
Confidence 358999999999999999874 68999999998877775443 3444488999998776432 8999997532 11
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcC
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P 258 (555)
.-...++..+. .|+|||.++++..
T Consensus 365 g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 365 GLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp CSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred chHHHHHHHHH-hcCCCcEEEEECC
Confidence 11233555554 5999999999763
No 250
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.38 E-value=3.7e-09 Score=104.35 Aligned_cols=100 Identities=12% Similarity=0.061 Sum_probs=68.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCC-CCccEEEeccc----
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS-RSFELAHCSRC---- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d-~sFDlVv~s~~---- 228 (555)
..+|||||||+|.++..|++. .++++|+++.++..+..+.. ...++.+..+|+..+++++ ++| .|+++..
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSC
T ss_pred CCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccCCCc-EEEEeCCcccc
Confidence 358999999999999998863 68899999887754432221 2345788899999888774 678 6665420
Q ss_pred ------ccccccchHHHH----HHHHhhcCCCcEEEEEcC
Q 008748 229 ------RIDWLQRDGILL----LELDRLLRPGGYFVYSSP 258 (555)
Q Consensus 229 ------~l~~~~d~~~~L----~el~RvLkPGG~lvis~P 258 (555)
.+.+......++ +.+.|+|+|||.+++..+
T Consensus 107 ~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 107 TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 011111222334 668999999998887554
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.36 E-value=8.4e-07 Score=95.24 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=81.1
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc-----------------CCCccccCChhhhhHHHHHHH
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQFA 196 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~-----------------~~V~~vdis~~dls~a~i~~A 196 (555)
...+.+.+++.. ....+|||.|||+|.++..+++ ..+.|+|+++.++..+..+..
T Consensus 158 ~v~~~mv~~l~~--------~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 158 PLIQAMVDCINP--------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHCC--------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--------CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 345556666542 2235899999999998877653 368899998887766665544
Q ss_pred HHcCC---CeEEEEeCCCCCCCCCCCccEEEecccccccccc-----------------hHHHHHHHHhhcCCCcEEEEE
Q 008748 197 LERGI---PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR-----------------DGILLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 197 ~~rg~---~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~~d-----------------~~~~L~el~RvLkPGG~lvis 256 (555)
. .+. ...+..+|+...+.. .+||+|+++-. +..... ...++..+.++|+|||+++++
T Consensus 230 l-~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V 306 (445)
T 2okc_A 230 L-HGIGTDRSPIVCEDSLEKEPS-TLVDVILANPP-FGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVV 306 (445)
T ss_dssp H-TTCCSSCCSEEECCTTTSCCS-SCEEEEEECCC-SSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred H-hCCCcCCCCEeeCCCCCCccc-CCcCEEEECCC-CCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEE
Confidence 3 344 567888887766654 48999998642 221110 136899999999999999999
Q ss_pred cCCC
Q 008748 257 SPEA 260 (555)
Q Consensus 257 ~P~~ 260 (555)
.|..
T Consensus 307 ~p~~ 310 (445)
T 2okc_A 307 LPDN 310 (445)
T ss_dssp EEHH
T ss_pred ECCc
Confidence 8763
No 252
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.31 E-value=1.8e-06 Score=90.80 Aligned_cols=103 Identities=18% Similarity=0.275 Sum_probs=66.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC-------------------CCccccCChhhhhHHHHHHHHH------------cCCCeE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-------------------DIIAMSLAPNDVHENQIQFALE------------RGIPST 204 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-------------------~V~~vdis~~dls~a~i~~A~~------------rg~~v~ 204 (555)
..+|+|+|||+|..+..+.+. .|...|+...|...-....... .+.+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999888777421 2334466666653332221110 000111
Q ss_pred E--EEe-CCCCCCCCCCCccEEEecccccccccc--------------------------------------hHHHHHHH
Q 008748 205 L--GVL-GTKRLPYPSRSFELAHCSRCRIDWLQR--------------------------------------DGILLLEL 243 (555)
Q Consensus 205 ~--~~~-d~~~Lp~~d~sFDlVv~s~~~l~~~~d--------------------------------------~~~~L~el 243 (555)
| .+. +...-.||+++||+|+|+. ++||..+ ...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 222 2333458899999999888 6999862 23368889
Q ss_pred HhhcCCCcEEEEEcCC
Q 008748 244 DRLLRPGGYFVYSSPE 259 (555)
Q Consensus 244 ~RvLkPGG~lvis~P~ 259 (555)
++.|+|||.++++...
T Consensus 212 a~eL~pGG~mvl~~~g 227 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLG 227 (374)
T ss_dssp HHHEEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEec
Confidence 9999999999998754
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.28 E-value=1.4e-06 Score=88.89 Aligned_cols=84 Identities=7% Similarity=-0.008 Sum_probs=65.0
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCC
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK 211 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~ 211 (555)
...+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++..+..+.. ...++.+..+|+.
T Consensus 37 ~i~~~Iv~~l~~--------~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 37 NFVNKAVESANL--------TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred HHHHHHHHhcCC--------CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 345556665543 23468999999999999999863 79999999998876665443 3457899999999
Q ss_pred CCCCCCCCccEEEecc
Q 008748 212 RLPYPSRSFELAHCSR 227 (555)
Q Consensus 212 ~Lp~~d~sFDlVv~s~ 227 (555)
.+++++.+||.|+++.
T Consensus 107 ~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 107 KVDLNKLDFNKVVANL 122 (295)
T ss_dssp TSCGGGSCCSEEEEEC
T ss_pred hCCcccCCccEEEEeC
Confidence 9998888899999653
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.28 E-value=2.8e-07 Score=91.11 Aligned_cols=68 Identities=12% Similarity=0.194 Sum_probs=49.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCC-CCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS-RSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d-~sFDlVv~s 226 (555)
..+|||||||+|.++..|+++ .++++|+++.++..+..+.. ...++.+..+|+..+++++ ..| .|+++
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV--DHDNFQVLNKDILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT--TCCSEEEECCCGGGCCCCSSCCC-EEEEE
T ss_pred CCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc--cCCCeEEEEChHHhCCcccCCCe-EEEEe
Confidence 468999999999999999864 68888888877654443221 1246899999999988874 445 34443
No 255
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.23 E-value=4.1e-06 Score=87.68 Aligned_cols=116 Identities=16% Similarity=0.181 Sum_probs=77.5
Q ss_pred CEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCC--CCC--------------
Q 008748 157 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP--YPS-------------- 217 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp--~~d-------------- 217 (555)
.+|||+|||+|.++..|+.. .|+++|+++.++..+..+.. ..+ .++.+..+|+..+. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~-~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIA-ANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHH-HTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 57999999999999999874 69999999999877775543 344 36888888875541 111
Q ss_pred CCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcEEEEEe
Q 008748 218 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 289 (555)
Q Consensus 218 ~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~vv~~~ 289 (555)
.+||+|++.-. . ..+..++.+.|+++|.+++++-.. . ..-+++..+.+ +|.+....
T Consensus 294 ~~fD~Vv~dPP---r----~g~~~~~~~~l~~~g~ivyvsc~p-----~--t~ard~~~l~~--~y~~~~~~ 349 (369)
T 3bt7_A 294 YQCETIFVDPP---R----SGLDSETEKMVQAYPRILYISCNP-----E--TLCKNLETLSQ--THKVERLA 349 (369)
T ss_dssp CCEEEEEECCC---T----TCCCHHHHHHHTTSSEEEEEESCH-----H--HHHHHHHHHHH--HEEEEEEE
T ss_pred CCCCEEEECcC---c----cccHHHHHHHHhCCCEEEEEECCH-----H--HHHHHHHHHhh--CcEEEEEE
Confidence 37999985421 1 113556777888999988876442 1 12234444443 57666444
No 256
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.20 E-value=6.7e-06 Score=82.59 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=63.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 231 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~ 231 (555)
..+|||+|||+|.++..++.. .+.++++.. |+....+.. ...+.++.....+++...++.+.||+|+|.. +.+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv-Dl~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~-apn 151 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR-DGHEKPMNV-QSLGWNIITFKDKTDIHRLEPVKCDTLLCDI-GES 151 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTCCCCCCC-CBTTGGGEEEECSCCTTTSCCCCCSEEEECC-CCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec-cCccccccc-CcCCCCeEEEeccceehhcCCCCccEEEecC-ccC
Confidence 358999999999999988754 344555542 221100000 0112244555566555667778999999865 333
Q ss_pred ----cccchH--HHHHHHHhhcCCC-cEEEEEcCC
Q 008748 232 ----WLQRDG--ILLLELDRLLRPG-GYFVYSSPE 259 (555)
Q Consensus 232 ----~~~d~~--~~L~el~RvLkPG-G~lvis~P~ 259 (555)
+.+... .+|..+.++|+|| |.|++..-.
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 433332 2578889999999 999996644
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.13 E-value=8.3e-06 Score=86.36 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=72.3
Q ss_pred CCEEEEECCCCcHHHHHHhc--C----------------------------------------CCccccCChhhhhHHHH
Q 008748 156 IRNVLDVGCGVASFGAYLLS--H----------------------------------------DIIAMSLAPNDVHENQI 193 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~--~----------------------------------------~V~~vdis~~dls~a~i 193 (555)
...|||.+||+|.++..++. . .|+++|+++.++..+..
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 35799999999999876653 1 38899999988877775
Q ss_pred HHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccccc---cchHHHHHHHHhhcCC--CcEEEEEcCC
Q 008748 194 QFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPE 259 (555)
Q Consensus 194 ~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~el~RvLkP--GG~lvis~P~ 259 (555)
+.. ..+. .+.+.++|+..++.+ .+||+|+++--..... .+...+..++.++||+ ||.+++.++.
T Consensus 282 Na~-~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 282 NAV-EAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHH-HTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHH-HcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 443 4444 489999999888876 4899999873211111 2234466666677766 8888887765
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.13 E-value=7.1e-06 Score=86.62 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=74.3
Q ss_pred CCEEEEECCCCcHHHHHHhc------------------------------------------CCCccccCChhhhhHHHH
Q 008748 156 IRNVLDVGCGVASFGAYLLS------------------------------------------HDIIAMSLAPNDVHENQI 193 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~------------------------------------------~~V~~vdis~~dls~a~i 193 (555)
..+|||.|||+|.++..++. ..|+|+|+++.++..+..
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 46899999999998877753 247899999988877775
Q ss_pred HHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccccccc---cchHHHHHHHHhhcCC--CcEEEEEcCCC
Q 008748 194 QFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPEA 260 (555)
Q Consensus 194 ~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~el~RvLkP--GG~lvis~P~~ 260 (555)
+.. ..+. .+.+.++|+.+++.+ .+||+|+++-...... .+...+.+++.++||+ ||.+++.++..
T Consensus 276 Na~-~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 276 NAE-IAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHH-HHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHH-HcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 543 3444 588999999888765 5899999864322111 2334567777778877 88888877653
No 259
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.10 E-value=5.4e-06 Score=78.68 Aligned_cols=114 Identities=17% Similarity=0.142 Sum_probs=82.4
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCC---CCCC-Cccchhhccccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESF---STYP-RTYDLLHAWKVFSEIE 475 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~---~typ-rtydl~h~~~~~s~~~ 475 (555)
.+|+|++||.|.++.+|..... +|+-++-. ..+...-+++.+...+.-.+.+ +..+ .+||+|.+.++|. .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~- 128 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H- 128 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S-
T ss_pred CEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h-
Confidence 7899999999999999987743 56666643 5666666665443332211222 2233 4599999988877 2
Q ss_pred cCCCChhhhhhhhcccccCCceEEEecc--------------------------------hhHHHHHHHHHhhcCccce
Q 008748 476 ERGCSFEDLLIEMDRMLRPEGFVIIRDK--------------------------------SSIINYIRKFITALKWDGW 522 (555)
Q Consensus 476 ~~~c~~~~~~~e~drilrp~g~~i~rd~--------------------------------~~~~~~~~~~~~~~~w~~~ 522 (555)
.+...+|-++-|+|+|||.+++.+. ....+++++++..-.+++.
T Consensus 129 ---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 129 ---QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp ---SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred ---hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 3578999999999999999999653 0157889999999999873
No 260
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.07 E-value=1.3e-05 Score=84.43 Aligned_cols=104 Identities=20% Similarity=0.164 Sum_probs=66.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC---------------------CCccccCChhhhhHHH------HHHH-HHcC--CCeEE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---------------------DIIAMSLAPNDVHENQ------IQFA-LERG--IPSTL 205 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---------------------~V~~vdis~~dls~a~------i~~A-~~rg--~~v~~ 205 (555)
..+|+|+||++|..+..+.+. .|...|+...|...-. .+.. ...+ .+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999888766542 1223455555542221 1111 2222 23455
Q ss_pred EEeC---CCCCCCCCCCccEEEecccccccccchHH---------------------------------------HHHHH
Q 008748 206 GVLG---TKRLPYPSRSFELAHCSRCRIDWLQRDGI---------------------------------------LLLEL 243 (555)
Q Consensus 206 ~~~d---~~~Lp~~d~sFDlVv~s~~~l~~~~d~~~---------------------------------------~L~el 243 (555)
..+. ...-.||+++||+|+|+. ++||..+... +|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544 334568999999999888 6999854321 25555
Q ss_pred HhhcCCCcEEEEEcCCC
Q 008748 244 DRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 244 ~RvLkPGG~lvis~P~~ 260 (555)
.+.|+|||.++++....
T Consensus 212 a~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 212 SEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHEEEEEEEEEEEECC
T ss_pred HHHhccCCeEEEEEecC
Confidence 89999999999987654
No 261
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.06 E-value=1.8e-05 Score=83.47 Aligned_cols=103 Identities=14% Similarity=0.067 Sum_probs=73.9
Q ss_pred CCEEEEECCCCcHHHHHHhc--C----------------------------------------CCccccCChhhhhHHHH
Q 008748 156 IRNVLDVGCGVASFGAYLLS--H----------------------------------------DIIAMSLAPNDVHENQI 193 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~--~----------------------------------------~V~~vdis~~dls~a~i 193 (555)
...|||.+||+|.++..++. . .|+|+|+++.++..+..
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 35799999999998877663 1 38899999988877764
Q ss_pred HHHHHcCC--CeEEEEeCCCCCCCCCCCccEEEecccc---cccccchHHHHHHHHhhcCC--CcEEEEEcCCC
Q 008748 194 QFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR---IDWLQRDGILLLELDRLLRP--GGYFVYSSPEA 260 (555)
Q Consensus 194 ~~A~~rg~--~v~~~~~d~~~Lp~~d~sFDlVv~s~~~---l~~~~d~~~~L~el~RvLkP--GG~lvis~P~~ 260 (555)
+. ...+. .+.+.++|+..++.+ .+||+|+++--. +.-..+...+..++.+.||+ ||.+++.++..
T Consensus 275 Na-~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 275 NA-REVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HH-HHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HH-HHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 44 34444 489999999888876 489999986311 11112335577777778876 99998888753
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.04 E-value=1.1e-05 Score=80.48 Aligned_cols=82 Identities=11% Similarity=0.177 Sum_probs=58.7
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCC
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK 211 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~ 211 (555)
...+.+.+.+.. .+..+|||||||+|.++..|+++ .|+++|+++.++..+..+... ..++.+..+|+.
T Consensus 16 ~i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~ 85 (255)
T 3tqs_A 16 FVLQKIVSAIHP--------QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDAL 85 (255)
T ss_dssp HHHHHHHHHHCC--------CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTT
T ss_pred HHHHHHHHhcCC--------CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchH
Confidence 345556666553 23468999999999999999975 688999988877655533321 457899999998
Q ss_pred CCCCCC----CCccEEEec
Q 008748 212 RLPYPS----RSFELAHCS 226 (555)
Q Consensus 212 ~Lp~~d----~sFDlVv~s 226 (555)
.+++++ +.|| |+++
T Consensus 86 ~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 86 QFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TCCGGGSCCSSCEE-EEEE
T ss_pred hCCHHHhccCCCeE-EEec
Confidence 887643 4688 5543
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.04 E-value=1.2e-05 Score=82.40 Aligned_cols=102 Identities=14% Similarity=-0.000 Sum_probs=69.3
Q ss_pred CCEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcC-CCeEEEEeCCCCCCCCC---CCccEEEe-
Q 008748 156 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPS---RSFELAHC- 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~d~~~Lp~~d---~sFDlVv~- 225 (555)
..+|||+|||+|..+..|+. ..|+++|+++..+.....+. ...+ .++.+..+|+..++... ++||.|++
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~-~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D 181 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL-ARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLD 181 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEEC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCeEEEEeCChHhcCccccccCCCCEEEEc
Confidence 46899999999999988875 36899999998876666444 3334 36888889987765432 57999996
Q ss_pred ---cc-cccccc-----------cch-------HHHHHHHHhhcCCCcEEEEEcCC
Q 008748 226 ---SR-CRIDWL-----------QRD-------GILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 226 ---s~-~~l~~~-----------~d~-------~~~L~el~RvLkPGG~lvis~P~ 259 (555)
+. ..+... .+. ..+|..+.++|+ ||+++.++-.
T Consensus 182 ~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 182 PSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp CCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred CCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 11 111110 011 235777777887 9999987654
No 264
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.00 E-value=3.6e-05 Score=73.08 Aligned_cols=150 Identities=17% Similarity=0.164 Sum_probs=92.8
Q ss_pred hhHhHhHhhHHHHHHHHHH------------hhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCCCchhH
Q 008748 371 EEFHEDIGIWQVRVVDYWK------------QMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI 438 (555)
Q Consensus 371 ~~~~~d~~~w~~~v~~y~~------------~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~ 438 (555)
+.|..+...|......|.. .+........-.+|+|++||.|.++..|. . +|+-++.... .+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-~-----~v~~~D~s~~-~~ 99 (215)
T 2zfu_A 27 RLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR-N-----PVHCFDLASL-DP 99 (215)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-S-----CEEEEESSCS-ST
T ss_pred HHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-c-----cEEEEeCCCC-Cc
Confidence 4456666677665555533 11111111234579999999999999884 2 3333332211 11
Q ss_pred HhhccccchhcccccCCCCCCCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecchh---HHHHHHHHHh
Q 008748 439 IYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS---IINYIRKFIT 515 (555)
Q Consensus 439 i~~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~---~~~~~~~~~~ 515 (555)
-+. -.|. +.++.-+.+||+|.+..++. . -+...+|-|+-|+|+|||.+++.+-.. ..+++.+++.
T Consensus 100 ~~~------~~d~-~~~~~~~~~fD~v~~~~~l~-~----~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~ 167 (215)
T 2zfu_A 100 RVT------VCDM-AQVPLEDESVDVAVFCLSLM-G----TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVT 167 (215)
T ss_dssp TEE------ESCT-TSCSCCTTCEEEEEEESCCC-S----SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHH
T ss_pred eEE------Eecc-ccCCCCCCCEeEEEEehhcc-c----cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHH
Confidence 111 1122 22333356899999988874 2 247899999999999999999976544 4678888888
Q ss_pred hcCccceecccccccccCCCCCceEEEEEec
Q 008748 516 ALKWDGWLSEVEPRIDALSSSEERVLIAKKK 546 (555)
Q Consensus 516 ~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 546 (555)
...++... .+ .....-.+++++|.
T Consensus 168 ~~Gf~~~~--~~-----~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 168 KLGFKIVS--KD-----LTNSHFFLFDFQKT 191 (215)
T ss_dssp HTTEEEEE--EE-----CCSTTCEEEEEEEC
T ss_pred HCCCEEEE--Ee-----cCCCeEEEEEEEec
Confidence 88888632 11 11234578888886
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.98 E-value=5.9e-06 Score=91.05 Aligned_cols=116 Identities=16% Similarity=0.135 Sum_probs=77.7
Q ss_pred HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc----------------------CCCccccCChhhhhHHH
Q 008748 135 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS----------------------HDIIAMSLAPNDVHENQ 192 (555)
Q Consensus 135 y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~----------------------~~V~~vdis~~dls~a~ 192 (555)
..+.+.+++.. ....+|||.+||+|.|+..+++ ..+.|+|+++.++..+.
T Consensus 157 iv~~mv~~l~p--------~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 157 LIKTIIHLLKP--------QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp HHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcc--------CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 44555666542 2235899999999998877653 25778888887776665
Q ss_pred HHHHHHcCCC------eEEEEeCCCCCC-CCCCCccEEEecccccccccc--------------hHHHHHHHHhhcCCCc
Q 008748 193 IQFALERGIP------STLGVLGTKRLP-YPSRSFELAHCSRCRIDWLQR--------------DGILLLELDRLLRPGG 251 (555)
Q Consensus 193 i~~A~~rg~~------v~~~~~d~~~Lp-~~d~sFDlVv~s~~~l~~~~d--------------~~~~L~el~RvLkPGG 251 (555)
.+... .+.. ..+..+|+...+ ...+.||+|+++-. +..... ...++..+.+.|+|||
T Consensus 229 ~nl~l-~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPP-f~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 229 MNCLL-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPP-FGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp HHHHT-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCC-CTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HHHHH-hCCCccccccCCeEeCCCcccccccccCCeEEEECCC-cccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 44433 2333 567888865443 34568999997532 111111 1358999999999999
Q ss_pred EEEEEcCCC
Q 008748 252 YFVYSSPEA 260 (555)
Q Consensus 252 ~lvis~P~~ 260 (555)
+++++.|..
T Consensus 307 r~a~V~p~~ 315 (541)
T 2ar0_A 307 RAAVVVPDN 315 (541)
T ss_dssp EEEEEEEHH
T ss_pred EEEEEecCc
Confidence 999998864
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.97 E-value=3.5e-06 Score=88.08 Aligned_cols=105 Identities=10% Similarity=0.037 Sum_probs=68.2
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHc--------CCCeEEEEeCCCCCCC----CCCC
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER--------GIPSTLGVLGTKRLPY----PSRS 219 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~r--------g~~v~~~~~d~~~Lp~----~d~s 219 (555)
++++|||||||+|.++..++.+ .|+++|+++..+..+...+..-. +.++.+..+|+..+.- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 5689999999999999998864 57777777766654443321100 1257888888654321 3578
Q ss_pred ccEEEeccccccccc-----chHHHHHHH----HhhcCCCcEEEEEcCC
Q 008748 220 FELAHCSRCRIDWLQ-----RDGILLLEL----DRLLRPGGYFVYSSPE 259 (555)
Q Consensus 220 FDlVv~s~~~l~~~~-----d~~~~L~el----~RvLkPGG~lvis~P~ 259 (555)
||+|++-........ ....+++.+ .++|+|||.+++-...
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 999996432112111 113456666 8999999999986533
No 267
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.96 E-value=1.2e-05 Score=81.11 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=60.3
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCC
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK 211 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~ 211 (555)
...+.+.+.+.. .+. +|||||||+|.++..|++. .|+++|+++.++..+..+.. ..++.+..+|+.
T Consensus 34 ~i~~~Iv~~~~~--------~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l 101 (271)
T 3fut_A 34 AHLRRIVEAARP--------FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDAL 101 (271)
T ss_dssp HHHHHHHHHHCC--------CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGG
T ss_pred HHHHHHHHhcCC--------CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChh
Confidence 345556666553 234 7999999999999999875 78999999988865553332 357899999998
Q ss_pred CCCCCCC-CccEEEec
Q 008748 212 RLPYPSR-SFELAHCS 226 (555)
Q Consensus 212 ~Lp~~d~-sFDlVv~s 226 (555)
.+++++. .+|.|+++
T Consensus 102 ~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 102 LYPWEEVPQGSLLVAN 117 (271)
T ss_dssp GSCGGGSCTTEEEEEE
T ss_pred hCChhhccCccEEEec
Confidence 8887643 68888855
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.96 E-value=1e-05 Score=90.33 Aligned_cols=97 Identities=14% Similarity=0.126 Sum_probs=64.4
Q ss_pred CCCEEEEECCCCcHHHHHH---hcC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEec
Q 008748 155 NIRNVLDVGCGVASFGAYL---LSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCS 226 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~L---a~~-----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s 226 (555)
+...|||||||+|.+.... +.+ +|.+++-++......++..+..-+..++++.++++++..| +.+|+|||-
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 3458999999999874333 222 5789998886543333222222245689999999998877 579999972
Q ss_pred ccccccc---cchHHHHHHHHhhcCCCcEEE
Q 008748 227 RCRIDWL---QRDGILLLELDRLLRPGGYFV 254 (555)
Q Consensus 227 ~~~l~~~---~d~~~~L~el~RvLkPGG~lv 254 (555)
- +.+. +.--.++....|.|||||.++
T Consensus 436 w--MG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 L--LGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp C--CBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred c--CcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 1 1111 111246777889999999876
No 269
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.90 E-value=8e-06 Score=79.39 Aligned_cols=122 Identities=11% Similarity=0.125 Sum_probs=80.6
Q ss_pred cCCCcceeEeeccCCcchhhhhccCCCceEEEecccCC-CCchhHHhhcc----ccc-hhcccccCCCCCCCccchhhcc
Q 008748 395 AQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG----LIG-TVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 395 ~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~~~l~~i~~rg----l~g-~~~~~ce~~~typrtydl~h~~ 468 (555)
+....-.+|+|++||.|.++..|...- .-+|+-++- +..+...-++- -+- +..|+. .++.-+.+||+|.+.
T Consensus 89 l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~ 165 (254)
T 1xtp_A 89 LPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASME-TATLPPNTYDLIVIQ 165 (254)
T ss_dssp STTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGG-GCCCCSSCEEEEEEE
T ss_pred hcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHH-HCCCCCCCeEEEEEc
Confidence 333455689999999999998886532 124555553 24455444432 122 223433 344334799999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEecch----------------hHHHHHHHHHhhcCccc
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~----------------~~~~~~~~~~~~~~w~~ 521 (555)
+++..+.. -....+|-++-|+|+|||.+++.+.. ...+++++++..-.++.
T Consensus 166 ~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 232 (254)
T 1xtp_A 166 WTAIYLTD--ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRV 232 (254)
T ss_dssp SCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCE
T ss_pred chhhhCCH--HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEE
Confidence 98875421 13678999999999999999998731 12477888888878876
No 270
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.88 E-value=2.9e-05 Score=76.26 Aligned_cols=116 Identities=16% Similarity=0.209 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc--cccchhcccccC
Q 008748 378 GIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR--GLIGTVHDWCES 454 (555)
Q Consensus 378 ~~w~~~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r--gl~g~~~~~ce~ 454 (555)
..|........+.+...+.. -..|+|++||.|.++..|...-. +|+-++-. ..+...-++ ++-=+-.|.. .
T Consensus 31 ~~~~~~~~~~~~~l~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~ 104 (263)
T 3pfg_A 31 KDYHREAADLAALVRRHSPK--AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-D 104 (263)
T ss_dssp CCHHHHHHHHHHHHHHHCTT--CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-T
T ss_pred CCHHHHHHHHHHHHHhhCCC--CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-H
Confidence 34555555444444332322 36799999999999999987632 56666653 555555444 2211222332 3
Q ss_pred CCCCCCccchhhccc-cccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 455 FSTYPRTYDLLHAWK-VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 455 ~~typrtydl~h~~~-~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
++. +.+||+|.+.. +|..+.. .-....+|-++-|+|+|||.++|.
T Consensus 105 ~~~-~~~fD~v~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 105 FSL-GRRFSAVTCMFSSIGHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CCC-SCCEEEEEECTTGGGGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCc-cCCcCEEEEcCchhhhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 343 78999999987 7774421 113667899999999999999995
No 271
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.88 E-value=6.4e-06 Score=82.04 Aligned_cols=98 Identities=12% Similarity=0.222 Sum_probs=66.8
Q ss_pred ceeEeeccCCcchhhhhcc-CCCceEEEecccCCC-CchhHHhhc----cccchhcccccCCCCCCCccchhhccccccc
Q 008748 400 FRNVMDMNSNLGGFAAALK-DKDVWVMNVAPVRMS-ARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~-~~~~wvmnv~p~~~~-~~l~~i~~r----gl~g~~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
-..|+|++||.|+++..|. ..+. +|+-++-. ..+...-++ |+..-..-.+..+..+|.+||+|.+.++|..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 3579999999999998887 3343 56656543 555554443 4422111112222334589999999998875
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEec
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+.. -+...+|-|+-|+|+|||.+++.+
T Consensus 142 ~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 FGH--ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp TCT--TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCh--HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 432 247889999999999999999864
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.86 E-value=5.7e-06 Score=87.21 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=70.8
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHc--------------CCC-eEEEEeCCCCCCC-C
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER--------------GIP-STLGVLGTKRLPY-P 216 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~r--------------g~~-v~~~~~d~~~Lp~-~ 216 (555)
.+|||+|||+|.++..++.+ .|+++|+++..+..+..+..... +.. +.+..+|+..+.. .
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~ 128 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAER 128 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHS
T ss_pred CEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhc
Confidence 58999999999999988753 58899999988877776655441 444 7888888654421 1
Q ss_pred CCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 217 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 217 d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
.+.||+|+..- + .....++..+.+.|++||+++++.
T Consensus 129 ~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 129 HRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp TTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 35799999431 1 123568999999999999988874
No 273
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.85 E-value=8.8e-06 Score=86.17 Aligned_cols=95 Identities=11% Similarity=0.092 Sum_probs=69.9
Q ss_pred CEEEEECCCCcHHHHHHhc-----CCCccccCChhhhhHHHHHHHHHcCC-C--eEEEEeCCCCC-C-CCCCCccEEEec
Q 008748 157 RNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-P--STLGVLGTKRL-P-YPSRSFELAHCS 226 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~-----~~V~~vdis~~dls~a~i~~A~~rg~-~--v~~~~~d~~~L-p-~~d~sFDlVv~s 226 (555)
.+|||++||+|.++..++. ..|+++|+++..+..+..+... .+. + +.+..+|+..+ . ...+.||+|++.
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~-Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL-NNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH-TTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-hCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 5899999999999998886 2589999999888666655443 344 3 78888886432 1 113579999954
Q ss_pred ccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 227 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 227 ~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
- + ..+..++..+.+.|++||+++++.
T Consensus 133 P----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 3 1 223568999999999999998865
No 274
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.81 E-value=0.00011 Score=70.59 Aligned_cols=95 Identities=20% Similarity=0.292 Sum_probs=63.1
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-cchh-cccccCCCCCCCccchhhccc-cc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-IGTV-HDWCESFSTYPRTYDLLHAWK-VF 471 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-~g~~-~~~ce~~~typrtydl~h~~~-~~ 471 (555)
-.+|+|++||.|.++..|..... +|+-++.. ..+...-++ |+ +-+. .|.. .++ ++.+||+|.+.+ +|
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLN-INRKFDLITCCLDST 112 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCC-CSCCEEEEEECTTGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCC-ccCCceEEEEcCccc
Confidence 35799999999999999887532 45555543 444443332 22 1111 2222 232 458999999987 88
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEE
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
..+.. .=....+|-++-|+|+|||.+++
T Consensus 113 ~~~~~-~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 113 NYIID-SDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGCCS-HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccCC-HHHHHHHHHHHHHhcCCCcEEEE
Confidence 75411 01367899999999999999998
No 275
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.80 E-value=3.5e-05 Score=73.40 Aligned_cols=160 Identities=14% Similarity=0.132 Sum_probs=95.1
Q ss_pred hhHHHHHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-------c
Q 008748 378 GIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-------I 445 (555)
Q Consensus 378 ~~w~~~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-------~ 445 (555)
.....+.+...+.+. ...-..|+|++||.|.++..|.+.- ...+|+-++-. ..+...-++ |+ +
T Consensus 12 ~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v 86 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLK----SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRI 86 (219)
T ss_dssp CHHHHHHHHHHHHHH----HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTE
T ss_pred cchHHHHHHHHHHHh----hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcce
Confidence 344444444434332 2234589999999999999997642 11245555543 444443332 21 1
Q ss_pred c-hhcccccCCCCCCCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecchhH------------------
Q 008748 446 G-TVHDWCESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSSI------------------ 506 (555)
Q Consensus 446 g-~~~~~ce~~~typrtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~~------------------ 506 (555)
- +..|. +..+.-+.+||+|-+..+|..+.. -.+..+|-++-|+|+|||.+++-...+.
T Consensus 87 ~~~~~d~-~~~~~~~~~fD~V~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (219)
T 3jwg_A 87 SLFQSSL-VYRDKRFSGYDAATVIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHR 163 (219)
T ss_dssp EEEECCS-SSCCGGGTTCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCT
T ss_pred EEEeCcc-cccccccCCCCEEEEHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCce
Confidence 1 22233 333333469999999999885532 1246889999999999998886543321
Q ss_pred ----HHHHH----HHHhhcCccceecccccccccCCCCCceEEEEEec
Q 008748 507 ----INYIR----KFITALKWDGWLSEVEPRIDALSSSEERVLIAKKK 546 (555)
Q Consensus 507 ----~~~~~----~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 546 (555)
.++++ .++..-.+++...-+-.. .+......+|-|++|+
T Consensus 164 ~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~-~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 164 FEWTRKEFQTWAVKVAEKYGYSVRFLQIGEI-DDEFGSPTQMGVFTLG 210 (219)
T ss_dssp TSBCHHHHHHHHHHHHHHHTEEEEEEEESCC-CTTSCCSEEEEEEEEC
T ss_pred eeecHHHHHHHHHHHHHHCCcEEEEEecCCc-cccCCCCeEEEEEecc
Confidence 23344 777777787754322211 2223457889999986
No 276
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.78 E-value=1.4e-05 Score=83.67 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=66.6
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--------------------CCccccCChhhhhHHHHHHHHH-cCCCeEEEEe---CC
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--------------------DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVL---GT 210 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--------------------~V~~vdis~~dls~a~i~~A~~-rg~~v~~~~~---d~ 210 (555)
..-+|+|+||++|..+..+.+. .|...|+...|..........- ...+..|..+ +.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3457999999999776655432 2334466666654333211100 0002234333 24
Q ss_pred CCCCCCCCCccEEEecccccccccch---------------------------------HHHHHHHHhhcCCCcEEEEEc
Q 008748 211 KRLPYPSRSFELAHCSRCRIDWLQRD---------------------------------GILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 211 ~~Lp~~d~sFDlVv~s~~~l~~~~d~---------------------------------~~~L~el~RvLkPGG~lvis~ 257 (555)
..-.||++++|+|+|+. ++||..+. ..+|+...+.|+|||.++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 45668999999999888 69997542 124888899999999999987
Q ss_pred CC
Q 008748 258 PE 259 (555)
Q Consensus 258 P~ 259 (555)
..
T Consensus 210 ~g 211 (359)
T 1m6e_X 210 LG 211 (359)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.77 E-value=0.00011 Score=74.87 Aligned_cols=111 Identities=16% Similarity=0.151 Sum_probs=75.4
Q ss_pred CCCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHH-----HcCCCeEEEEeCCCCC-CCCCCCccEE
Q 008748 154 GNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL-----ERGIPSTLGVLGTKRL-PYPSRSFELA 223 (555)
Q Consensus 154 ~~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~-----~rg~~v~~~~~d~~~L-p~~d~sFDlV 223 (555)
.++++||=||.|.|..++.+++. .|+.+|+++.-+..+..-+.. -..+++.+..+|.... .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45679999999999999999874 577888888666544432221 1135789999996543 3456789999
Q ss_pred Eeccccccccc----chHHHHHHHHhhcCCCcEEEEEcCCCCCCCh
Q 008748 224 HCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAHDP 265 (555)
Q Consensus 224 v~s~~~l~~~~----d~~~~L~el~RvLkPGG~lvis~P~~~~~~~ 265 (555)
+.-. .-.... ....+++.+.++|+|||.++.-....+....
T Consensus 162 i~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~ 206 (294)
T 3o4f_A 162 ISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQE 206 (294)
T ss_dssp EESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCH
T ss_pred EEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChH
Confidence 9532 111111 1145899999999999999986544443443
No 278
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.76 E-value=5.8e-05 Score=79.54 Aligned_cols=281 Identities=15% Similarity=0.151 Sum_probs=138.1
Q ss_pred CEEEEECCCCcHHHHHHh-cCCCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccccc--
Q 008748 157 RNVLDVGCGVASFGAYLL-SHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 233 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La-~~~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~-- 233 (555)
.+||.++-+.|.++..+. ..+++.++-+-.+ . +....++..... .. ....+...||+|+.- +.-.
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~l~~~~~~~~~--~~--~~~~~~~~~d~v~~~---~Pk~k~ 114 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVERLETSRAA--F---RCLTASGLQARL--AL--PWEAAAGAYDLVVLA---LPAGRG 114 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEEEECBHHH--H---HHHHHTTCCCEE--CC--GGGSCTTCEEEEEEE---CCGGGC
T ss_pred CcEEEecCCCCccccccCCCCceEEEeCcHHH--H---HHHHHcCCCccc--cC--CccCCcCCCCEEEEE---CCcchh
Confidence 489999999998887776 3345544322211 1 112334555432 11 111234679998832 1110
Q ss_pred -cchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHHHHHH-hcCcEEEEEeeceEEeecCCCchhhhccCCCC
Q 008748 234 -QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLK-SMCWKIVSKKDQTVIWAKPISNSCYLKRVPGS 311 (555)
Q Consensus 234 -~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~~l~~-~~gw~vv~~~~~~~iw~KPl~~~c~~~r~~~~ 311 (555)
...+..|.++.+.|+|||.++++.... .-.+.+...++ ..++......+.. +.|........
T Consensus 115 ~~~~~~~l~~~~~~l~~g~~i~~~g~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~~~~~~~ 178 (381)
T 3dmg_A 115 TAYVQASLVAAARALRMGGRLYLAGDKN--------KGFERYFKEARALLGYGVVVRREGP--------YRVALLEKEKE 178 (381)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEGG--------GTHHHHHHHHHHHHSCEEEEEEETT--------EEEEEEECCSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEEccH--------HHHHHHHHHHHhhhccccccccccC--------cEEEEEEccCC
Confidence 123567899999999999999877442 12233333333 4466433333221 11222111111
Q ss_pred CCCCCCCCCCCCccccccccccccccccccccccCCCCCCCCCCCCCCCCCccccCC-ChhhHhHhHhhHHHHHHHHHHh
Q 008748 312 RPPLCSSDDDPDVTWNVLMKACISPYSAKMHHEKGTGLVPWPARLTAPPPRLEEVGV-TTEEFHEDIGIWQVRVVDYWKQ 390 (555)
Q Consensus 312 ~p~lc~~~~~~~~~wy~~L~~Ci~~~~~~~~~~~~~~~~~~p~rl~~~~~~~~~~~~-~~~~~~~d~~~w~~~v~~y~~~ 390 (555)
.|. ....| ...+..+ .... -++...| |+ +.......++...+.+..+..
T Consensus 179 ~p~-------~~~~w-~~~~~~~---~g~~------------~~~~~~p------gvFs~~~~d~~t~~ll~~l~~~l~- 228 (381)
T 3dmg_A 179 APP-------LPSLW-RAFSARI---LGAE------------YTFHHLP------GVFSAGKVDPASLLLLEALQERLG- 228 (381)
T ss_dssp CCC-------CCCCC-EEEEEEE---TTEE------------EEEEECT------TCTTTTSCCHHHHHHHHHHHHHHC-
T ss_pred CCC-------Ccccc-ceeeEEe---cCce------------EEEEeCC------CceeCCCCCHHHHHHHHHHHHhhc-
Confidence 111 11123 1111111 0000 0111111 11 111122334444444433311
Q ss_pred hhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hccc-cchhcccccCCCCCCCccch
Q 008748 391 MKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL-IGTVHDWCESFSTYPRTYDL 464 (555)
Q Consensus 391 ~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl-~g~~~~~ce~~~typrtydl 464 (555)
.....=.+|+|++||.|.++..|..... .|+-++.. ..+...- ..|+ +-+++.=++.+..=..+||+
T Consensus 229 ----~~~~~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~ 301 (381)
T 3dmg_A 229 ----PEGVRGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDI 301 (381)
T ss_dssp ----TTTTTTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEE
T ss_pred ----ccCCCCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEE
Confidence 0111234799999999999999876642 55555543 3333221 2232 22222222222221369999
Q ss_pred hhccccccccccC-CCChhhhhhhhcccccCCceEEEec
Q 008748 465 LHAWKVFSEIEER-GCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 465 ~h~~~~~s~~~~~-~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
|-++..|...... .-....++-++-|+|+|||.++|--
T Consensus 302 Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 302 IVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp EEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 9998877631110 1124578889999999999999864
No 279
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.76 E-value=8.6e-06 Score=75.89 Aligned_cols=112 Identities=18% Similarity=0.296 Sum_probs=74.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hccc--cc-hhcccccCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL--IG-TVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl--~g-~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
.+|+|++||.|.++..|..... +|+-++.. ..+...- +.|+ +- +..|..+ ++. +.+||+|.+.++|.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhh
Confidence 4899999999999998876632 55555543 3343322 2333 22 2223333 344 78999999998887
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecch--------------hHHHHHHHHHhhcCccc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS--------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~--------------~~~~~~~~~~~~~~w~~ 521 (555)
.+.. -....+|-++-|+|+|||.+++-+.. -..+++++++.. |++
T Consensus 109 ~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~ 167 (199)
T 2xvm_A 109 FLEA--KTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WER 167 (199)
T ss_dssp GSCG--GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEE
T ss_pred hCCH--HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeE
Confidence 4421 24678999999999999998764311 135677788777 876
No 280
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.75 E-value=1.4e-05 Score=75.85 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=80.8
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc-cccchhcccccCCCCCCCccchhhccccccccccCC
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERG 478 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r-gl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~~ 478 (555)
..|+|++||.|.++..|.+... +|+-++.. ..+...-++ ++--...|.. .++ .+.+||+|.+.++|..+..
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~~-- 117 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVPR-- 117 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSCH--
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcCH--
Confidence 4799999999999999987632 56666643 555555555 4332333433 334 5689999999998874431
Q ss_pred CChhhhhhhhcccccCCceEEEecch---------------hHHHHHHHHHhhcC-ccc
Q 008748 479 CSFEDLLIEMDRMLRPEGFVIIRDKS---------------SIINYIRKFITALK-WDG 521 (555)
Q Consensus 479 c~~~~~~~e~drilrp~g~~i~rd~~---------------~~~~~~~~~~~~~~-w~~ 521 (555)
-+...+|-|+-|+|+|||.+++.... -..+++++++..-. ++.
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~ 176 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWAS 176 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEE
Confidence 13678999999999999999986221 14678888888888 886
No 281
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.75 E-value=2.3e-05 Score=78.26 Aligned_cols=124 Identities=15% Similarity=0.104 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCcHHHHHHhc----------------CCCccccCCh---hhhhHH----------HHHHHHH-------
Q 008748 155 NIRNVLDVGCGVASFGAYLLS----------------HDIIAMSLAP---NDVHEN----------QIQFALE------- 198 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~----------------~~V~~vdis~---~dls~a----------~i~~A~~------- 198 (555)
+..+|||||+|+|..+..+++ ..+++++..+ .++..+ ..+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 346899999999987666432 2567788776 333322 1111111
Q ss_pred --------cCCCeEEEEeCCCC-CCCCC----CCccEEEecccccccccc--hHHHHHHHHhhcCCCcEEEEEcCCCCCC
Q 008748 199 --------RGIPSTLGVLGTKR-LPYPS----RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH 263 (555)
Q Consensus 199 --------rg~~v~~~~~d~~~-Lp~~d----~sFDlVv~s~~~l~~~~d--~~~~L~el~RvLkPGG~lvis~P~~~~~ 263 (555)
...++.+..+|+.. ++..+ ..||+|+.-...-.-.++ ...++.++.++|+|||.|+.-+..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa---- 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA---- 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC----
Confidence 01245677888544 44222 279999963211111111 256999999999999999863221
Q ss_pred ChhhHHHHHHHHHHHHhcCcEEEEEee
Q 008748 264 DPENRRIWNAMYDLLKSMCWKIVSKKD 290 (555)
Q Consensus 264 ~~e~~~~~~~l~~l~~~~gw~vv~~~~ 290 (555)
..+.+.+...||.+.....
T Consensus 216 --------~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 216 --------GFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp --------HHHHHHHHHHTEEEEEECC
T ss_pred --------HHHHHHHHHCCCEEEeCCC
Confidence 1456677888999775433
No 282
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.71 E-value=0.00025 Score=74.50 Aligned_cols=96 Identities=10% Similarity=-0.025 Sum_probs=57.6
Q ss_pred CEEEEECCCCcHHHHHHhcCCCccccCChhhhhHHHHHHHHHcCCC---eEEEEeCCCCCCCCCCCccEEEecccccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIP---STLGVLGTKRLPYPSRSFELAHCSRCRIDWL 233 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~~V~~vdis~~dls~a~i~~A~~rg~~---v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~~ 233 (555)
.+||.|+.+.|.++..|+...++.+.=+-.. ..+..+.....+.. +.+. ...+.+ .+.||+|+..- -...
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~-~~~~~~n~~~~~~~~~~~~~~-~~~~~~---~~~~~~v~~~l--pk~~ 112 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKPYSIGDSYIS-ELATRENLRLNGIDESSVKFL-DSTADY---PQQPGVVLIKV--PKTL 112 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCCEEEESCHHH-HHHHHHHHHHTTCCGGGSEEE-ETTSCC---CSSCSEEEEEC--CSCH
T ss_pred CCEEEECCCCCHHHHhhccCCceEEEhHHHH-HHHHHHHHHHcCCCccceEec-cccccc---ccCCCEEEEEc--CCCH
Confidence 4699999999999999887666655322221 12222333334443 3332 222322 26799988421 2222
Q ss_pred cchHHHHHHHHhhcCCCcEEEEEcCC
Q 008748 234 QRDGILLLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 234 ~d~~~~L~el~RvLkPGG~lvis~P~ 259 (555)
......|..+...|+||+.+++....
T Consensus 113 ~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 113 ALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp HHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 33345788899999999999876643
No 283
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.70 E-value=7.6e-05 Score=73.99 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHc-CCCeEEEEeC
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLG 209 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~r-g~~v~~~~~d 209 (555)
...+.+.+.+.. .+..+|||||||+|.++..|++. .++++|+++.++..+ +++ ..++.+..+|
T Consensus 18 ~i~~~iv~~~~~--------~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~-----~~~~~~~v~~i~~D 84 (249)
T 3ftd_A 18 GVLKKIAEELNI--------EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENL-----KSIGDERLEVINED 84 (249)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHH-----TTSCCTTEEEECSC
T ss_pred HHHHHHHHhcCC--------CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHH-----HhccCCCeEEEEcc
Confidence 455556666543 23468999999999999999875 577888877666443 332 3467899999
Q ss_pred CCCCCCCC
Q 008748 210 TKRLPYPS 217 (555)
Q Consensus 210 ~~~Lp~~d 217 (555)
+..+++++
T Consensus 85 ~~~~~~~~ 92 (249)
T 3ftd_A 85 ASKFPFCS 92 (249)
T ss_dssp TTTCCGGG
T ss_pred hhhCChhH
Confidence 99888764
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.68 E-value=0.00034 Score=73.23 Aligned_cols=118 Identities=9% Similarity=-0.037 Sum_probs=77.3
Q ss_pred CCCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 232 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~~ 232 (555)
++.++||+||++|+++..|+++ .|+++|..+.+. .. .....+.+...|...+..+.+.||+|+|-. +.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~--~l-----~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm-~~-- 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQ--SL-----MDTGQVTWLREDGFKFRPTRSNISWMVCDM-VE-- 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCH--HH-----HTTTCEEEECSCTTTCCCCSSCEEEEEECC-SS--
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcCh--hh-----ccCCCeEEEeCccccccCCCCCcCEEEEcC-CC--
Confidence 3479999999999999999975 688898876442 11 124578889999887777777899999754 22
Q ss_pred ccchHHHHHHHHhhcCCC---cEEEEEcCCCCCCChhhHHHHHHHHHHHHhcCcE
Q 008748 233 LQRDGILLLELDRLLRPG---GYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 284 (555)
Q Consensus 233 ~~d~~~~L~el~RvLkPG---G~lvis~P~~~~~~~e~~~~~~~l~~l~~~~gw~ 284 (555)
++...+.-+.+.|..| +.++..-........+.......+.+.++..|+.
T Consensus 281 --~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 281 --KPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp --CHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred --ChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcc
Confidence 3455555555555554 4333222222112233334566777888888875
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.68 E-value=2.8e-05 Score=87.19 Aligned_cols=97 Identities=11% Similarity=0.057 Sum_probs=66.5
Q ss_pred CCEEEEECCCCcHHHHH---H---hc---------C--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCC--
Q 008748 156 IRNVLDVGCGVASFGAY---L---LS---------H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-- 216 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~---L---a~---------~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~-- 216 (555)
...|||||||+|.++.. . ++ . .|.+++-++..+...+...+..-+..+.++.++++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 45899999999988532 1 12 1 6889999886654444333332345689999999888663
Q ss_pred ---CCCccEEEecccccccccch---HHHHHHHHhhcCCCcEEE
Q 008748 217 ---SRSFELAHCSRCRIDWLQRD---GILLLELDRLLRPGGYFV 254 (555)
Q Consensus 217 ---d~sFDlVv~s~~~l~~~~d~---~~~L~el~RvLkPGG~lv 254 (555)
.+..|+|+|-- +.+.-+. ...|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL--LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECC--CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEec--cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 46899999643 3332222 357888899999999866
No 286
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.67 E-value=0.00014 Score=82.40 Aligned_cols=103 Identities=16% Similarity=0.058 Sum_probs=68.8
Q ss_pred CCEEEEECCCCcHHHHHHhc----------------------------------------------CCCccccCChhhhh
Q 008748 156 IRNVLDVGCGVASFGAYLLS----------------------------------------------HDIIAMSLAPNDVH 189 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~----------------------------------------------~~V~~vdis~~dls 189 (555)
...|||.+||+|.++..++. ..++|+|+++.++.
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 35799999999998766542 25788999998887
Q ss_pred HHHHHHHHHcCCC--eEEEEeCCCCC--CCCCCCccEEEecccc-cccc--cchHHH---HHHHHhhcCCCcEEEEEcCC
Q 008748 190 ENQIQFALERGIP--STLGVLGTKRL--PYPSRSFELAHCSRCR-IDWL--QRDGIL---LLELDRLLRPGGYFVYSSPE 259 (555)
Q Consensus 190 ~a~i~~A~~rg~~--v~~~~~d~~~L--p~~d~sFDlVv~s~~~-l~~~--~d~~~~---L~el~RvLkPGG~lvis~P~ 259 (555)
.+..+ +...|.. +.+.++|+..+ |..+++||+|+++--. .... .+...+ +.++.+.+.|||.+++.++.
T Consensus 271 ~A~~N-~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 271 RARTN-ARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHH-HHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHH-HHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 77644 4444554 78999998777 3444489999986310 0111 122233 44555566689999987754
No 287
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.67 E-value=8.7e-06 Score=85.94 Aligned_cols=140 Identities=9% Similarity=0.123 Sum_probs=96.9
Q ss_pred HhHhhHHHHHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhccc--
Q 008748 375 EDIGIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDW-- 451 (555)
Q Consensus 375 ~d~~~w~~~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~-- 451 (555)
..+..|.+....+...+...+....=..|+|++||.|.++..|.+... +|+=++-. +.+...-++|+-.....+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~ 159 (416)
T 4e2x_A 83 SGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEK 159 (416)
T ss_dssp GGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeech
Confidence 445678777777666554444444456899999999999999987643 66666654 677777777653322111
Q ss_pred --ccCCCCCCCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecch--------------------hHHHH
Q 008748 452 --CESFSTYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS--------------------SIINY 509 (555)
Q Consensus 452 --ce~~~typrtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~--------------------~~~~~ 509 (555)
.+.++.-+.+||+|.+.++|..+. +...+|-|+-|+|+|||.+++.... -..+.
T Consensus 160 ~~~~~l~~~~~~fD~I~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 235 (416)
T 4e2x_A 160 ATADDVRRTEGPANVIYAANTLCHIP----YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATS 235 (416)
T ss_dssp HHHHHHHHHHCCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHH
T ss_pred hhHhhcccCCCCEEEEEECChHHhcC----CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHH
Confidence 111121137999999999998653 4889999999999999999996321 01356
Q ss_pred HHHHHhhcCccc
Q 008748 510 IRKFITALKWDG 521 (555)
Q Consensus 510 ~~~~~~~~~w~~ 521 (555)
++.++..-.+++
T Consensus 236 l~~ll~~aGf~~ 247 (416)
T 4e2x_A 236 VQGMAQRCGFEL 247 (416)
T ss_dssp HHHHHHHTTEEE
T ss_pred HHHHHHHcCCEE
Confidence 777888777765
No 288
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.67 E-value=9.4e-06 Score=78.77 Aligned_cols=96 Identities=15% Similarity=0.216 Sum_probs=65.3
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCCCCC-CCccchhhccccccccccCC
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTY-PRTYDLLHAWKVFSEIEERG 478 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~~ty-prtydl~h~~~~~s~~~~~~ 478 (555)
.+|+|++||.|.++..|.+... +|+-++-. ..+...-++ +--+..|..+-...+ +.+||+|.+.++|..+..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~-- 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP-- 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG--
T ss_pred CeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh-cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc--
Confidence 5799999999999998876532 45555543 555555555 211112222211122 379999999999875432
Q ss_pred CChhhhhhhhcccccCCceEEEec
Q 008748 479 CSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 479 c~~~~~~~e~drilrp~g~~i~rd 502 (555)
-.+..+|-|+-|+|+|||.+++..
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 246789999999999999999863
No 289
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.65 E-value=1.7e-05 Score=79.26 Aligned_cols=72 Identities=13% Similarity=0.100 Sum_probs=51.1
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCCh-------hhhhHHHHHHHHHcC-CCeEEEEeCCCCC-C-CCC--CCcc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAP-------NDVHENQIQFALERG-IPSTLGVLGTKRL-P-YPS--RSFE 221 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~-------~dls~a~i~~A~~rg-~~v~~~~~d~~~L-p-~~d--~sFD 221 (555)
..+|||+|||+|.++..|+.. .|+++|+++ .++..+..+...... .++.+..+|...+ + +++ ++||
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 358999999999999999864 789999999 555444432222111 2488999997653 3 444 6899
Q ss_pred EEEecc
Q 008748 222 LAHCSR 227 (555)
Q Consensus 222 lVv~s~ 227 (555)
+|++.-
T Consensus 164 ~V~~dP 169 (258)
T 2r6z_A 164 IVYLDP 169 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999765
No 290
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.64 E-value=4.7e-05 Score=73.08 Aligned_cols=92 Identities=21% Similarity=0.313 Sum_probs=63.6
Q ss_pred eEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc---cccchhcccccCCCCCCCccchhhccccccccccC
Q 008748 402 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR---GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER 477 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r---gl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~ 477 (555)
+|+|++||.|.++..|.+.-. +|+-++-. ..+...-++ ++--+-.|..+. ..+.+||+|++.+++..+.
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~-- 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHID-- 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCS--
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhc--
Confidence 599999999999999976522 45555543 444444433 221122233232 2467999999999987543
Q ss_pred CCChhhhhhhhc-ccccCCceEEEec
Q 008748 478 GCSFEDLLIEMD-RMLRPEGFVIIRD 502 (555)
Q Consensus 478 ~c~~~~~~~e~d-rilrp~g~~i~rd 502 (555)
+...+|-|+- |+|+|||++++.+
T Consensus 118 --~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 --DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 3678999999 9999999999865
No 291
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.64 E-value=5.3e-05 Score=76.54 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=53.7
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhcC--C----CccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--D----IIAMSLAPNDVHENQIQFALERGIPSTLGV 207 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~~--~----V~~vdis~~dls~a~i~~A~~rg~~v~~~~ 207 (555)
...+.+.+.+.. ....+|||||||+|.++..|++. . |+++|+++.++..+..+ + ..++.+..
T Consensus 29 ~i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~ 96 (279)
T 3uzu_A 29 GVIDAIVAAIRP--------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHA 96 (279)
T ss_dssp HHHHHHHHHHCC--------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEE
T ss_pred HHHHHHHHhcCC--------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEE
Confidence 345556666653 23468999999999999999863 4 89999998887666544 2 45689999
Q ss_pred eCCCCCCCCC
Q 008748 208 LGTKRLPYPS 217 (555)
Q Consensus 208 ~d~~~Lp~~d 217 (555)
+|+..+++++
T Consensus 97 ~D~~~~~~~~ 106 (279)
T 3uzu_A 97 GDALTFDFGS 106 (279)
T ss_dssp SCGGGCCGGG
T ss_pred CChhcCChhH
Confidence 9998888753
No 292
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.62 E-value=3.1e-05 Score=75.08 Aligned_cols=117 Identities=17% Similarity=0.246 Sum_probs=77.4
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccc------cchh-cccccCCCCCCCccchhhccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGL------IGTV-HDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl------~g~~-~~~ce~~~typrtydl~h~~~~~ 471 (555)
-.+|+|++||.|.++..|...- .-+|+-++-. ..+...-++.- +-++ .| .+.++.-+.+||+|.+..+|
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d-~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG-LQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC-GGGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcC-hhhcCCCCCCEEEEEEcchh
Confidence 5689999999999999887653 1245555532 33443333210 1122 23 23344434589999999887
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEecch---------------hHHHHHHHHHhhcCccc
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~---------------~~~~~~~~~~~~~~w~~ 521 (555)
..+... .+..+|-|+-|+|+|||.+++.|.. ...+++++++....++.
T Consensus 157 ~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 219 (241)
T 2ex4_A 157 GHLTDQ--HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSL 219 (241)
T ss_dssp GGSCHH--HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCE
T ss_pred hhCCHH--HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeE
Confidence 744321 2457899999999999999996531 13778888888888876
No 293
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.62 E-value=5.7e-05 Score=69.61 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=75.1
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccc-cch-hcccccCCCCCCCccchhhcc-cccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGL-IGT-VHDWCESFSTYPRTYDLLHAW-KVFSEIEE 476 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl-~g~-~~~~ce~~~typrtydl~h~~-~~~s~~~~ 476 (555)
.+|+|++||.|.++..|..... +|+-++.. ..+...-++.- +-+ ..|..+ ++.-+.+||+|.++ .++.....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhcCh
Confidence 4899999999999999876532 55555543 33433333310 112 223322 22224789999988 56653311
Q ss_pred CCCChhhhhhhhcccccCCceEEEecchh---HHHHHHHHHhhcCccce
Q 008748 477 RGCSFEDLLIEMDRMLRPEGFVIIRDKSS---IINYIRKFITALKWDGW 522 (555)
Q Consensus 477 ~~c~~~~~~~e~drilrp~g~~i~rd~~~---~~~~~~~~~~~~~w~~~ 522 (555)
=....+|-++-|+|+|||.+++..... ...++.+++....+++.
T Consensus 124 --~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 124 --DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp --HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEE
T ss_pred --HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEe
Confidence 125788999999999999999854332 46778888888888763
No 294
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.61 E-value=2.1e-05 Score=79.13 Aligned_cols=97 Identities=11% Similarity=0.204 Sum_probs=67.4
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----cccc----hhcccccCCCCCCCccchhhcc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GLIG----TVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl~g----~~~~~ce~~~typrtydl~h~~ 468 (555)
.-..|+|++||.|+++..|... + .+|+-++-. ..+...-++ |+-+ +..|+. .+ +.+||+|.+.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~ 144 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSL 144 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEc
Confidence 3457999999999999998765 5 256666543 555544433 5431 223333 23 7899999999
Q ss_pred cccccccc-----CCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEE-----RGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~-----~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
++|..+.. ..-....+|-|+-|+|+|||.+++.+
T Consensus 145 ~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 145 GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 98875422 11235789999999999999999875
No 295
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.60 E-value=0.0001 Score=81.24 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=69.5
Q ss_pred EEEEECCCCcHHHHHHhc-------------------CCCccccCChhhhhHHHHHHHHHcCCCeEE--EEeCCCCCC-C
Q 008748 158 NVLDVGCGVASFGAYLLS-------------------HDIIAMSLAPNDVHENQIQFALERGIPSTL--GVLGTKRLP-Y 215 (555)
Q Consensus 158 ~VLDIGCGtG~~a~~La~-------------------~~V~~vdis~~dls~a~i~~A~~rg~~v~~--~~~d~~~Lp-~ 215 (555)
+|||.+||+|.|...+++ ..+.|+|+++..+..+..+... .+....+ ..+|+...+ +
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-RGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-TTCCCBCCSSSCCTTTSCSC
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-hCCCcccceeccchhcCccc
Confidence 899999999998776532 2577888888877666655544 3443333 566654443 4
Q ss_pred CCCCccEEEeccccc--cccc-------------------------ch-HHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 216 PSRSFELAHCSRCRI--DWLQ-------------------------RD-GILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 216 ~d~sFDlVv~s~~~l--~~~~-------------------------d~-~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
++..||+|+++--.. .|.. +. -.++..+.+.|+|||+++++.|..
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 567899999853211 1110 00 148999999999999999999874
No 296
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.60 E-value=6.1e-05 Score=70.87 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=66.2
Q ss_pred eEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----ccc---chhcccccCCCCCCCccchhhccccccc
Q 008748 402 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLI---GTVHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl~---g~~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
+|+|++||.|.++..|...+- .+|+-++-. ..+...-++ |+- -.++.=.+.++.-+.+||+|.+.+++..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 899999999999999987632 356666643 455444333 432 2222222333433479999999998875
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEec
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+ -+...+|-|+-|+|+|||.+++.+
T Consensus 124 ~----~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 124 W----EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp C----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c----cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 4 247889999999999999999974
No 297
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.60 E-value=2.6e-05 Score=77.03 Aligned_cols=98 Identities=15% Similarity=0.292 Sum_probs=65.0
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----cc--cchhcccccCCCCCCCccchhhcccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GL--IGTVHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl--~g~~~~~ce~~~typrtydl~h~~~~ 470 (555)
.=.+|+|++||.|.++..|... |- ..|+-++.. ..+...-++ |+ +-....=.+.++.-+.+||+|++..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPD--AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 3468999999999999988654 21 134444432 444443332 43 22222122234433579999999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
|..+. +...+|-++-|+|+|||++++.+
T Consensus 115 l~~~~----~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHLQ----SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcC----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 87442 36789999999999999999965
No 298
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.60 E-value=4.1e-05 Score=71.94 Aligned_cols=116 Identities=11% Similarity=0.143 Sum_probs=81.2
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc--ccchhcccccCCCCCCCccchhhccccccccccC
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG--LIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER 477 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg--l~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~ 477 (555)
..|+|++||.|.++..|..... +|+-++-. ..+...-++. +-=+..|.. .++.-+.+||+|.+.++|..+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~-- 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMG-- 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCC--
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCC--
Confidence 4799999999999999976632 45555543 4555555542 211222332 2333347999999999887543
Q ss_pred CCChhhhhhhhcccccCCceEEEecch----------------hHHHHHHHHHhhcCccce
Q 008748 478 GCSFEDLLIEMDRMLRPEGFVIIRDKS----------------SIINYIRKFITALKWDGW 522 (555)
Q Consensus 478 ~c~~~~~~~e~drilrp~g~~i~rd~~----------------~~~~~~~~~~~~~~w~~~ 522 (555)
.-+...+|-++-|+|+|||.+++.+.. -..+++++++....|++.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 177 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVT 177 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEE
Confidence 125789999999999999999987522 237889999999999873
No 299
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.59 E-value=3.6e-05 Score=73.08 Aligned_cols=103 Identities=17% Similarity=0.233 Sum_probs=69.8
Q ss_pred cCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc----ccchhcccccCCCCCCCccchhhccc
Q 008748 395 AQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG----LIGTVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 395 ~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg----l~g~~~~~ce~~~typrtydl~h~~~ 469 (555)
+....-.+|+|++||.|.++..|...- .+|+-++-. ..+...-++. -+-+++.=.+.++ -+.+||+|.+.+
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~ 122 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAE 122 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEES
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEcc
Confidence 455667899999999999999998752 467777654 4555444432 1222222223333 367999999998
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+|..+.. .-.+..+|-++-|+|+|||.+++.+
T Consensus 123 ~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 123 VLYYLED-MTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CGGGSSS-HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHhCCC-HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8874331 1123567999999999999999953
No 300
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.58 E-value=6.6e-05 Score=68.42 Aligned_cols=129 Identities=15% Similarity=0.156 Sum_probs=84.9
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc--cccchhcccccCCCCCCCccchhhccccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR--GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 475 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r--gl~g~~~~~ce~~~typrtydl~h~~~~~s~~~ 475 (555)
.-.+|+|++||.|.++.+|...- . +|+-++-. ..+...-++ .+--+..| . +.-+.+||+|.+..++..+.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~--~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA-T--KLYCIDINVIALKEVKEKFDSVITLSDP--K--EIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE-E--EEEEECSCHHHHHHHHHHCTTSEEESSG--G--GSCTTCEEEEEEESCSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhc-C--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--C--CCCCCceEEEEEccchhccc
Confidence 34689999999999999998764 1 67777653 555555554 12112223 2 22246999999999887542
Q ss_pred cCCCChhhhhhhhcccccCCceEEEecchh-------------HHHHHHHHHhhcCccceecccccccccCCCCCceEEE
Q 008748 476 ERGCSFEDLLIEMDRMLRPEGFVIIRDKSS-------------IINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLI 542 (555)
Q Consensus 476 ~~~c~~~~~~~e~drilrp~g~~i~rd~~~-------------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~ 542 (555)
+...+|-|+-|+|+|||.+++.+-.. ..+++++++. .|+.. ... . . ....-.|+
T Consensus 90 ----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~-~~~---~--~-~~~~~~l~ 156 (170)
T 3i9f_A 90 ----DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVE-KRF---N--P-TPYHFGLV 156 (170)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEE-EEE---C--S-STTEEEEE
T ss_pred ----CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEE-Ecc---C--C-CCceEEEE
Confidence 47889999999999999999874321 2556777777 66652 111 1 1 12456777
Q ss_pred EEecc
Q 008748 543 AKKKL 547 (555)
Q Consensus 543 ~~k~~ 547 (555)
+.|+=
T Consensus 157 ~~~~~ 161 (170)
T 3i9f_A 157 LKRKT 161 (170)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 77653
No 301
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.58 E-value=3.1e-05 Score=78.46 Aligned_cols=98 Identities=11% Similarity=0.201 Sum_probs=66.1
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----cccchhcccccCCCCCCCccchhhccccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl~g~~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
-.+|+|++||.|+++..|... .. +|+-++-. ..+...-++ |+-....-.+..+...|.+||+|.+.++|..
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 357999999999999888754 33 55555543 555554443 5422111112222334689999999998875
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEec
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+.. -+...+|-|+-|+|+|||.+++.+
T Consensus 168 ~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 FGH--ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp TCG--GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 421 236789999999999999999864
No 302
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.58 E-value=3.1e-05 Score=73.57 Aligned_cols=97 Identities=18% Similarity=0.263 Sum_probs=64.7
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc---cccchhcccccCCCCCCCccchhhcccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR---GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r---gl~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
.-.+|+|++||.|.++..|.... .+|+-++-. ..+...-++ .+-=+..|..+ ++ ++.+||+|.+.++|..+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhcC
Confidence 34589999999999999998663 255556543 445444444 22212223332 22 23899999999988754
Q ss_pred ccCCCChhhhhhhhcccccCCceEEEec
Q 008748 475 EERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 475 ~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
... ....+|-|+-|+|+|||.+++.+
T Consensus 120 ~~~--~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 120 TDD--EKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ChH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 321 11348999999999999999975
No 303
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.56 E-value=0.00017 Score=79.42 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=80.6
Q ss_pred HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc-------CCCccccCChhhhhHHHHHHHHHcCC---CeE
Q 008748 135 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-------HDIIAMSLAPNDVHENQIQFALERGI---PST 204 (555)
Q Consensus 135 y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~-------~~V~~vdis~~dls~a~i~~A~~rg~---~v~ 204 (555)
..+.+.+++.... ......+|||.+||+|.+...+++ ..+.|+|+++.....+..+.... +. ...
T Consensus 205 Vv~lmv~ll~~~~----~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~-gi~~~~~~ 279 (542)
T 3lkd_A 205 VAKLMTQIAFLGR----EDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH-GVPIENQF 279 (542)
T ss_dssp HHHHHHHHHHTTC----TTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT-TCCGGGEE
T ss_pred HHHHHHHHHhccc----CCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc-CCCcCccc
Confidence 4555666654211 012346899999999988776653 25778888888776666555443 43 467
Q ss_pred EEEeCCCCC--C-CCCCCccEEEecccc-cccc------c--------------c-hHHHHHHHHhhcC-CCcEEEEEcC
Q 008748 205 LGVLGTKRL--P-YPSRSFELAHCSRCR-IDWL------Q--------------R-DGILLLELDRLLR-PGGYFVYSSP 258 (555)
Q Consensus 205 ~~~~d~~~L--p-~~d~sFDlVv~s~~~-l~~~------~--------------d-~~~~L~el~RvLk-PGG~lvis~P 258 (555)
+..+|+... | .....||+|+++--. ..|. . + .-.++..+.+.|+ |||++.++.|
T Consensus 280 I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 280 LHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred eEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 888887655 4 456789999985210 0110 0 0 0237999999999 9999999998
Q ss_pred CCC
Q 008748 259 EAY 261 (555)
Q Consensus 259 ~~~ 261 (555)
..+
T Consensus 360 ~g~ 362 (542)
T 3lkd_A 360 HGV 362 (542)
T ss_dssp THH
T ss_pred chH
Confidence 753
No 304
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.56 E-value=0.00016 Score=73.53 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=88.0
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCC-CCchhHHhhc--cccc----hhcccc-cCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR--GLIG----TVHDWC-ESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~~~l~~i~~r--gl~g----~~~~~c-e~~~typrtydl~h~~~~~s 472 (555)
+.|+|++||.|+|+..|..... -.|+-+|- ++.|..-..+ .++. -..... +.++ ..+||++-++-.|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~--~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFT--EGLPSFASIDVSFI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCT--TCCCSEEEECCSSS
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCC--CCCCCEEEEEeeHh
Confidence 5799999999999988865532 24555664 4666653321 1110 011111 2222 13599999888776
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEe---------c-------------chhHHHHHHHHHhhcCccceeccccccc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIR---------D-------------KSSIINYIRKFITALKWDGWLSEVEPRI 530 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~r---------d-------------~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 530 (555)
++..+|-|+-|+|+|||.+++= + ...++++|.+.+....|.+...+..+..
T Consensus 163 -------sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~ 235 (291)
T 3hp7_A 163 -------SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQ 235 (291)
T ss_dssp -------CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSC
T ss_pred -------hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 2688999999999999999864 1 1136888999999999998654444444
Q ss_pred ccCCCCCceEEEEEec
Q 008748 531 DALSSSEERVLIAKKK 546 (555)
Q Consensus 531 ~~~~~~~~~~l~~~k~ 546 (555)
|+. .+.|=++.++|.
T Consensus 236 g~~-gn~e~l~~~~~~ 250 (291)
T 3hp7_A 236 GGH-GNIEFLAHLEKT 250 (291)
T ss_dssp CGG-GCCCEEEEEEEC
T ss_pred CCC-cCHHHHHHhhhc
Confidence 543 356777777773
No 305
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.55 E-value=3.2e-05 Score=77.07 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=63.0
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCCCCCCCccchhhccccccccccCCC
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERGC 479 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~~c 479 (555)
.+|+|++||.|.++..|.+.-- +|+-++-. ..|...-.+.=|-..+.=.|.++.=+.+||+|.+...|. + .
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h-~----~ 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMH-W----F 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCT-T----C
T ss_pred CCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehh-H----h
Confidence 4699999999999999986532 45555533 333322222222223333455554467999999988875 2 3
Q ss_pred ChhhhhhhhcccccCCceEEEe
Q 008748 480 SFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 480 ~~~~~~~e~drilrp~g~~i~r 501 (555)
+....+-|+-|+|||||.+++-
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEEE
Confidence 4778999999999999998763
No 306
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.53 E-value=3.6e-05 Score=73.09 Aligned_cols=97 Identities=12% Similarity=0.175 Sum_probs=67.1
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCCCCC-CCccchhhcccccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTY-PRTYDLLHAWKVFSEIEE 476 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~~ty-prtydl~h~~~~~s~~~~ 476 (555)
.-.+|+|++||.|.++.+|...+ .+|+-++-. ..+...-++.---+..|..+....+ +.+||+|.+.++|..+.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~- 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF- 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSS-
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcC-
Confidence 44689999999999999998875 356666643 4444444443211222333211233 37999999999887543
Q ss_pred CCCChhhhhhhhcccccCCceEEEec
Q 008748 477 RGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 477 ~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+...+|-++-|+|+|||.+++..
T Consensus 108 ---~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 108 ---DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ---CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 36789999999999999999864
No 307
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.53 E-value=4.3e-05 Score=74.45 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=67.9
Q ss_pred CcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc-----ccchhcccccCCCCCCCccchhhccccc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG-----LIGTVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg-----l~g~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
..-.+|+|++||.|.++..|...- -.+|+-++-. ..+...-++. +--+..|..+ ++.-+.+||+|++.++|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAI 130 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHH
Confidence 344589999999999999887641 1255555543 5555555543 1112334433 33335799999999988
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
..+.. -+...+|-|+-|+|||||.+++.+
T Consensus 131 ~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 131 LALSL--ENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GGSCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcCh--HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 75411 236789999999999999999875
No 308
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.53 E-value=4.1e-05 Score=76.13 Aligned_cols=81 Identities=11% Similarity=0.067 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc-CC--CccccCChhhhhHHHHHHHHHcCCCeEEEEeCCC
Q 008748 135 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-HD--IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK 211 (555)
Q Consensus 135 y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~-~~--V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~ 211 (555)
..+.+.+.+.. .+..+|||||||+|.++. +.. .. |+++|+++.++..+..+... ..++.+..+|+.
T Consensus 9 i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~--~~~v~~i~~D~~ 77 (252)
T 1qyr_A 9 VIDSIVSAINP--------QKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL--GPKLTIYQQDAM 77 (252)
T ss_dssp HHHHHHHHHCC--------CTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT--GGGEEEECSCGG
T ss_pred HHHHHHHhcCC--------CCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc--CCceEEEECchh
Confidence 44555555543 223579999999999999 764 35 88888888776444322111 136889999998
Q ss_pred CCCCCCC-----CccEEEec
Q 008748 212 RLPYPSR-----SFELAHCS 226 (555)
Q Consensus 212 ~Lp~~d~-----sFDlVv~s 226 (555)
.+++++. ..|.|+++
T Consensus 78 ~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 78 TFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp GCCHHHHHHHHTSCEEEEEE
T ss_pred hCCHHHhhcccCCceEEEEC
Confidence 8876532 23566644
No 309
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.52 E-value=4.3e-05 Score=73.58 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=77.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccc---cchhcccccCCCCCCCccchhhcccccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGL---IGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 476 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl---~g~~~~~ce~~~typrtydl~h~~~~~s~~~~ 476 (555)
.+|+|++||.|.++.+|..... +|+-++-. ..+...-+++. +-.++.=.+.++.-+.+||+|.+.++|..+.
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE- 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS-
T ss_pred CeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc-
Confidence 4899999999999999987633 55556543 55666665532 1112211223343357999999999888542
Q ss_pred CCCChhhhhhhhcccccCCceEEEecch----------------------hHHHHHHHHHhhcCccc
Q 008748 477 RGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 477 ~~c~~~~~~~e~drilrp~g~~i~rd~~----------------------~~~~~~~~~~~~~~w~~ 521 (555)
+...+|-++-|+|+|||.+++.+.. -...++++++....+++
T Consensus 131 ---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 131 ---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred ---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 3678999999999999999997511 12346777777777765
No 310
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.52 E-value=1.1e-05 Score=80.37 Aligned_cols=100 Identities=18% Similarity=0.301 Sum_probs=66.1
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cccchh-------cccccCCC---CCCCccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLIGTV-------HDWCESFS---TYPRTYD 463 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl~g~~-------~~~ce~~~---typrtyd 463 (555)
.-.+|+|++||.|.++..|.+... +|+-++-. ..|...-++ +.-+.+ .|+.+ ++ .-+.+||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeE
Confidence 346899999999999999987643 67777754 555555433 221111 12211 11 2247999
Q ss_pred hhhcc-cccccccc---CCCChhhhhhhhcccccCCceEEEec
Q 008748 464 LLHAW-KVFSEIEE---RGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 464 l~h~~-~~~s~~~~---~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+|++. .+|..+.. ..-....+|-|+-|+|+|||++++..
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99997 67664322 11236789999999999999999864
No 311
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.51 E-value=9.8e-05 Score=69.63 Aligned_cols=112 Identities=17% Similarity=0.194 Sum_probs=76.4
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cccchhcccccCCCCCCCccchhhccccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 475 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl~g~~~~~ce~~~typrtydl~h~~~~~s~~~ 475 (555)
.+|+|++||.|.++.+|...+. .+|+-++.. ..+...-++ |+-.+----+..++..+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH--
Confidence 5799999999999999876643 245555543 444443332 5422111112223334689999998876652
Q ss_pred cCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCccc
Q 008748 476 ERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDG 521 (555)
Q Consensus 476 ~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~ 521 (555)
+..++-++-|+|+|||.+++.+ .......+.+++....++.
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQI 179 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEE
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCce
Confidence 5788999999999999999864 3445777888888877776
No 312
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.51 E-value=4.5e-05 Score=72.00 Aligned_cols=96 Identities=19% Similarity=0.221 Sum_probs=66.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccch---hcccccCCCCCCCccchhhcccccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGT---VHDWCESFSTYPRTYDLLHAWKVFSEIEE 476 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~---~~~~ce~~~typrtydl~h~~~~~s~~~~ 476 (555)
.+|+|++||.|.++..|.... .+|+-++-. ..+...-++|+-.+ ..|..+. .-+.+||+|.+.++|..+..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~~ 122 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHVPD 122 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEechhhcCCH
Confidence 489999999999999987652 255555543 55555555663221 2233222 23579999999998875432
Q ss_pred CCCChhhhhhhhcccccCCceEEEecc
Q 008748 477 RGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 477 ~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
-.+..+|-|+-|+|+|||.+++.+.
T Consensus 123 --~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 --DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp --HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1257899999999999999998754
No 313
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.50 E-value=3e-05 Score=75.50 Aligned_cols=112 Identities=16% Similarity=0.241 Sum_probs=76.6
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccccc----hhcccccCCCCCCCccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGLIG----TVHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl~g----~~~~~ce~~~typrtydl~h~~~~ 470 (555)
..|+|++||.|.++..|... +. .|+-++-. ..+...- +.|+-+ +..|. +.++.-+.+||+|++.++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecCh
Confidence 48999999999999888654 32 55555543 4454433 335422 23344 444433479999999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEecch---------------------hHHHHHHHHHhhcCccc
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~---------------------~~~~~~~~~~~~~~w~~ 521 (555)
+..+ +...+|-++-|+|||||.+++.+.. ....++.+++..-.++.
T Consensus 124 l~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (257)
T 3f4k_A 124 IYNI-----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTP 190 (257)
T ss_dssp SCCC-----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEE
T ss_pred Hhhc-----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeE
Confidence 8743 4789999999999999999998621 12455666777666665
No 314
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.50 E-value=7.4e-05 Score=72.74 Aligned_cols=95 Identities=13% Similarity=0.173 Sum_probs=65.4
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc------cccchhcccccCCCCCCCccchhhccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR------GLIGTVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r------gl~g~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
.-.+|+|++||.|.++..|.+.. .+|+-++-. ..+...-++ ++--+..|. +.++.-+.+||+|++..+|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCch
Confidence 34689999999999999998763 355555543 445544443 111122333 3344334689999999888
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
..+. +...++-|+-|+|+|||.+++.
T Consensus 115 ~~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 7432 4788999999999999999975
No 315
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.50 E-value=7e-05 Score=72.83 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=63.1
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hcccc---ch-hcccccCCCCCCCccchhhccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGLI---GT-VHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl~---g~-~~~~ce~~~typrtydl~h~~~ 469 (555)
-.+|+|++||.|.++.+|... .. +|+-++.. ..+...- +.|+- -+ ..|+. .++. +.+||+|.+.+
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVG 111 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECC
Confidence 358999999999999888643 22 44545543 4444332 33442 22 22333 3333 78999999987
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
++-... +...+|-|+-|+|||||.+++.+
T Consensus 112 ~~~~~~----~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 112 ATWIAG----GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CGGGTS----SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ChHhcC----CHHHHHHHHHHHcCCCeEEEEec
Confidence 775322 47889999999999999999975
No 316
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.50 E-value=5.9e-05 Score=75.37 Aligned_cols=96 Identities=22% Similarity=0.326 Sum_probs=65.9
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhh----ccc---cchh-cccccCCCCCCCccchhhcc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYD----RGL---IGTV-HDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~----rgl---~g~~-~~~ce~~~typrtydl~h~~ 468 (555)
.-.+|+|++||.|.++..|... +. +|+-++-. ..+...-+ .|+ +-+. .|. +.++.-+.+||+|.+.
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSCSSCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-ccCCCCCCCEeEEEec
Confidence 3458999999999999988764 33 56666543 44444333 344 2222 232 2233224799999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+++..+. +...+|-|+-|+|||||.+++.+
T Consensus 158 ~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 158 DAFLHSP----DKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp SCGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcC----CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8887543 26889999999999999999875
No 317
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.49 E-value=7.2e-05 Score=68.86 Aligned_cols=115 Identities=14% Similarity=0.191 Sum_probs=73.5
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-----cchhcccccCCCCCCCccchhhcc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-----IGTVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-----~g~~~~~ce~~~typrtydl~h~~ 468 (555)
.-..|+|++||.|.++.+|.... -+|+-++.. ..+...-++ |+ --+..|+.+.++ +.+||+|.++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 34589999999999998887652 255555543 444433332 33 223345555443 5799999988
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEecch-hHHHHHHHHHhhcCccc
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-SIINYIRKFITALKWDG 521 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~-~~~~~~~~~~~~~~w~~ 521 (555)
..|..... .+..++-++-|+|+|||.+++-+.. ....++.+.++..-+++
T Consensus 127 ~~~~~~~~---~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~ 177 (194)
T 1dus_A 127 PPIRAGKE---VLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNV 177 (194)
T ss_dssp CCSTTCHH---HHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCC
T ss_pred CCcccchh---HHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcce
Confidence 87652111 3568899999999999999987544 33444555555553333
No 318
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.49 E-value=4.9e-05 Score=74.86 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=77.3
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----cccc---ch-hcccccCCCCCCCccchhhcccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLI---GT-VHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~---g~-~~~~ce~~~typrtydl~h~~~~ 470 (555)
-.+|+|++||.|.++..|.+.+- .+|+-++-. ..+...-+ .|+- -+ ..|+ +.++.-+.+||+|.+.++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCC
Confidence 45899999999999999987643 144444432 44444333 3442 22 2333 444433579999999998
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEecch---------------------hHHHHHHHHHhhcCccc
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~---------------------~~~~~~~~~~~~~~w~~ 521 (555)
|..+ +...+|-++-|+|||||.+++.+.. ....++.+++....++.
T Consensus 124 ~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 124 IYNI-----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp GGGT-----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred ceec-----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 8743 4789999999999999999987521 12456667777777765
No 319
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.47 E-value=6.4e-05 Score=79.94 Aligned_cols=104 Identities=13% Similarity=-0.026 Sum_probs=68.4
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHHHHHHHHHc-C-CCeEEEEeCCCCC-CC-CCCCccEEEeccc-
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER-G-IPSTLGVLGTKRL-PY-PSRSFELAHCSRC- 228 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a~i~~A~~r-g-~~v~~~~~d~~~L-p~-~d~sFDlVv~s~~- 228 (555)
+.+|||+|||+|..+..|+.. .|+++|+++.++..+..+..... + .++.+..+|+..+ +. ++++||+|++.-.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCCC
Confidence 368999999999999999864 69999999998877775554330 3 3688999997664 32 2357999998411
Q ss_pred ------ccccccchHHHHHHHHhhcC-CCcEEEEEcCC
Q 008748 229 ------RIDWLQRDGILLLELDRLLR-PGGYFVYSSPE 259 (555)
Q Consensus 229 ------~l~~~~d~~~~L~el~RvLk-PGG~lvis~P~ 259 (555)
.+...++...-+.++.+.|. .+..+++-.++
T Consensus 174 r~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP 211 (410)
T 3ll7_A 174 RSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSP 211 (410)
T ss_dssp C-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECT
T ss_pred cCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCC
Confidence 11122222224566666443 44556665544
No 320
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.46 E-value=5.7e-05 Score=73.32 Aligned_cols=98 Identities=15% Similarity=0.248 Sum_probs=67.1
Q ss_pred CcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccc--cchhcccccCCCCCCCccchhhcccc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL--IGTVHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl--~g~~~~~ce~~~typrtydl~h~~~~ 470 (555)
..-.+|+|++||.|.++.+|...-. +|+-++-. ..+...-+ .|+ +-+.+.=.+.++.-+.+||+|.+.++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 3456899999999999998876432 56666643 44444332 343 22222223445543479999999988
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+..+. +...+|-|+-|+|||||.+++.+
T Consensus 97 l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 97 AHHFS----DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 76432 47899999999999999999864
No 321
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.46 E-value=7e-05 Score=73.35 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=65.9
Q ss_pred CcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----cccc--c-hhcccccCCCCCCCccchhhccc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLI--G-TVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~--g-~~~~~ce~~~typrtydl~h~~~ 469 (555)
..-.+|+|++||.|.++..|...-- .|+-++.. .-|...-+ +|+- - +..|. +.++.-+.+||+|.+..
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQMPFTDERFHIVTCRI 111 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhCCCCCCCEEEEEEhh
Confidence 3456899999999999999876521 56666643 44544333 3432 1 12233 23332247999999998
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
++-.+. +...+|-|+-|+|||||.+++.+
T Consensus 112 ~l~~~~----d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP----NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 876432 46799999999999999999864
No 322
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.45 E-value=7.6e-05 Score=73.41 Aligned_cols=97 Identities=24% Similarity=0.309 Sum_probs=64.5
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----cccc---ch-hcccccCCCCCCCccchhhccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLI---GT-VHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~---g~-~~~~ce~~~typrtydl~h~~~ 469 (555)
.-.+|+|++||.|.++..|.... -.+|+-++-. ..+...-+ .|+- -+ ..|..+ ++.-+.+||+|.+.+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFEDASFDAVWALE 137 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCTTCEEEEEEES
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCCCCCccEEEEec
Confidence 34589999999999998886431 1245555543 44444333 2542 12 223322 332246999999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+|..+. +...+|-|+-|+|+|||.+++.+
T Consensus 138 ~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 138 SLHHMP----DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CTTTSS----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhCC----CHHHHHHHHHHHcCCCeEEEEEE
Confidence 887432 35889999999999999999875
No 323
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.45 E-value=0.00024 Score=68.33 Aligned_cols=114 Identities=14% Similarity=0.157 Sum_probs=77.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cccc----hhcccccCCCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLIG----TVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl~g----~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++..|.... .+|+-++-. ..+...-++ |+.. +-.|..+ ++ .+.+||+|.+.++|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 489999999999999997743 245555543 444443333 3222 2233333 22 34589999999888
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEecch-----------hHHHHHHHHHhhcCccc
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-----------SIINYIRKFITALKWDG 521 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~-----------~~~~~~~~~~~~~~w~~ 521 (555)
..+. .-....+|-++-|+|+|||.+++-+.. -..+++++++..-.|+.
T Consensus 143 ~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 143 CAIE--PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp TTSC--GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred hcCC--HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeE
Confidence 7442 224678999999999999999985321 13678899999888886
No 324
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.45 E-value=0.00012 Score=69.89 Aligned_cols=110 Identities=17% Similarity=0.195 Sum_probs=75.3
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCC-CCchhHHhhccccchhcccccCCCCCCCccchhhccccccccccCC
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEERG 478 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~~~l~~i~~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~~ 478 (555)
-.+|+|++||.|.++..|... +-++. +..+...-++++--+..|. +.++.-+.+||+|.+.+++..+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~--- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFVD--- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS---
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc---
Confidence 358999999999999999876 22332 2445555555432222232 33443346999999999887442
Q ss_pred CChhhhhhhhcccccCCceEEEecch------------------------hHHHHHHHHHhhcCccc
Q 008748 479 CSFEDLLIEMDRMLRPEGFVIIRDKS------------------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 479 c~~~~~~~e~drilrp~g~~i~rd~~------------------------~~~~~~~~~~~~~~w~~ 521 (555)
+...+|-++-|+|+|||.+++.+.. -..+++++++....++.
T Consensus 117 -~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 117 -DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 3678999999999999999986321 13467777777777775
No 325
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.43 E-value=0.00018 Score=69.12 Aligned_cols=93 Identities=18% Similarity=0.305 Sum_probs=62.0
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-cch-hcccccCCCCCCCccchhhccc-ccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-IGT-VHDWCESFSTYPRTYDLLHAWK-VFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-~g~-~~~~ce~~~typrtydl~h~~~-~~s 472 (555)
.+|+|++||.|.++..|... .+|+-++.. ..+...-++ |. +-. -.|..+ ++ .+.+||+|-+.. +|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCchh
Confidence 68999999999999999876 366666643 444444333 21 111 123222 22 468999998765 665
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEE
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
.+. ..-....+|-++-|+|+|||.+++
T Consensus 109 ~~~-~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 109 YLQ-TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GCC-SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 331 112466789999999999999997
No 326
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.43 E-value=0.0002 Score=72.18 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=85.2
Q ss_pred eeEeeccCCcchhhhhcc--CCCceEEEecccCCC-CchhHHh----hcccc---ch-hcccccCCCCCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALK--DKDVWVMNVAPVRMS-ARLKIIY----DRGLI---GT-VHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~--~~~~wvmnv~p~~~~-~~l~~i~----~rgl~---g~-~~~~ce~~~typrtydl~h~~~ 469 (555)
.+|+|++||.|.++.+|. ..|-. +|+-++-. ..+...- +.|+- -+ -.|..+ ++ ++.+||+|.+.+
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEECC
Confidence 479999999999999983 33332 45555542 4444333 23332 12 233333 33 458999999988
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEecch---------------------------------------hHHHHH
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS---------------------------------------SIINYI 510 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~---------------------------------------~~~~~~ 510 (555)
++..+... -....++-|+-|+|||||.+++.+-. ...+++
T Consensus 196 ~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 196 LNIYEPDD-ARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred hhhhcCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 77633211 11234799999999999999988711 247788
Q ss_pred HHHHhhcCccceecccccccccCCCCCceEEEEEec
Q 008748 511 RKFITALKWDGWLSEVEPRIDALSSSEERVLIAKKK 546 (555)
Q Consensus 511 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 546 (555)
+++++.-.++.. ...+ . ....-..++++|+
T Consensus 275 ~~~l~~aGF~~v-~~~~-~----~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 275 RAQLEEAGFTDL-RFED-D----RARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHTTCEEE-EEEC-C----TTSSSCEEEEECC
T ss_pred HHHHHHCCCEEE-EEEc-c----cCceeeEEEEecC
Confidence 899998888862 2211 1 1234567888884
No 327
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.42 E-value=0.00014 Score=73.15 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=59.5
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEecccccc-
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID- 231 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l~- 231 (555)
.+|||+|||+|.|+.+++.. .+.++|+.......+. .. ...+.++.....++....++.+.+|+|+|.. +.+
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi-~~-~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDm-Apns 168 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPI-MR-TTLGWNLIRFKDKTDVFNMEVIPGDTLLCDI-GESS 168 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC-CC-CBTTGGGEEEECSCCGGGSCCCCCSEEEECC-CCCC
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccc-cc-ccCCCceEEeeCCcchhhcCCCCcCEEEecC-ccCC
Confidence 58999999999999988753 4556666543211110 00 0012233333333333345567899999854 344
Q ss_pred ---cccchH--HHHHHHHhhcCCC--cEEEEEcCC
Q 008748 232 ---WLQRDG--ILLLELDRLLRPG--GYFVYSSPE 259 (555)
Q Consensus 232 ---~~~d~~--~~L~el~RvLkPG--G~lvis~P~ 259 (555)
+.+... .+|.-+.++|+|| |.|++-.-.
T Consensus 169 G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 169 PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 222222 2566678899999 999986643
No 328
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.41 E-value=0.00016 Score=68.15 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=63.8
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc-ccchhcccccCCCCCCCccchhhcccccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG-LIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEE 476 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg-l~g~~~~~ce~~~typrtydl~h~~~~~s~~~~ 476 (555)
.-.+|+|++||.|.++..| .. -+|+-++.. ..+...-++. -+-+.+.-.+.++.-+.+||+|.+.+++..+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PY----PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CC----SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCCeEEEECCCCCHhHHhC-CC----CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC-
Confidence 3458999999999999998 32 145555543 4444444441 11222222233443346999999998887442
Q ss_pred CCCChhhhhhhhcccccCCceEEEec
Q 008748 477 RGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 477 ~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+...+|-|+-|+|+|||.+++.+
T Consensus 110 ---~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 ---DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 47889999999999999999874
No 329
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.40 E-value=0.00013 Score=71.92 Aligned_cols=96 Identities=17% Similarity=0.258 Sum_probs=64.0
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCCCCCCCccchhhccccccccccC
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER 477 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~ 477 (555)
.-.+|+|++||.|.++..|.+... +|+-++-. ..+...-++.-+-..+.=.+.++.-+.+||+||+.+++..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--- 107 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHF--- 107 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGC---
T ss_pred CCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhc---
Confidence 446899999999999999987432 44444432 22322222221222222234455445799999999988744
Q ss_pred CCChhhhhhhhcccccCCceEEEec
Q 008748 478 GCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 478 ~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
-+...+|-|+-|+|| ||++++-+
T Consensus 108 -~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 108 -SHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp -SSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred -cCHHHHHHHHHHHhC-CcEEEEEE
Confidence 247899999999999 99887754
No 330
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.40 E-value=7.4e-05 Score=70.91 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=85.4
Q ss_pred ceeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc----cc--cc-hhcccccCCCCCCCccchhhccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR----GL--IG-TVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r----gl--~g-~~~~~ce~~~typrtydl~h~~~ 469 (555)
-.+|+|++||.|.++.+|... |-. .|+-++.. ..+...-++ |+ +- +..|. +.++.-..+||+|.+.+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKG--KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEES
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeeh
Confidence 357999999999999988643 211 34444432 444433322 32 11 22233 22333346899999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEecch-------------hHHHHHHHHHhhcCccceecccccccccCCCC
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-------------SIINYIRKFITALKWDGWLSEVEPRIDALSSS 536 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~-------------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 536 (555)
+|..+. +...+|-|+-|+|+|||.+++.+-. ...+++++++....++.. ... . . ..
T Consensus 115 ~l~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~-~~~---~--~-~~ 183 (219)
T 3dh0_A 115 TFHELS----EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVG-RVV---E--V-GK 183 (219)
T ss_dssp CGGGCS----SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEE-EEE---E--E-TT
T ss_pred hhhhcC----CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEE-EEE---e--e-CC
Confidence 887542 3688999999999999999997521 236788899998889862 111 1 1 23
Q ss_pred CceEEEEEec
Q 008748 537 EERVLIAKKK 546 (555)
Q Consensus 537 ~~~~l~~~k~ 546 (555)
...+++++|.
T Consensus 184 ~~~~~~~~k~ 193 (219)
T 3dh0_A 184 YCFGVYAMIV 193 (219)
T ss_dssp TEEEEEEECC
T ss_pred ceEEEEEEec
Confidence 4567777775
No 331
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.40 E-value=0.0001 Score=73.18 Aligned_cols=112 Identities=12% Similarity=0.147 Sum_probs=72.4
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc--cccchhcccccCCCCCCCccchhhccccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR--GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 475 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r--gl~g~~~~~ce~~~typrtydl~h~~~~~s~~~ 475 (555)
.-.+|+|++||.|.++.+|..... +|+-++-. ..+...-++ ++-=+..|. +.++ ++.+||+|++..+|..+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADA-RNFR-VDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCT-TTCC-CSSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECCh-hhCC-cCCCcCEEEEcchhhhCc
Confidence 345899999999999999976322 45555543 444444443 221122233 3344 478999999998887432
Q ss_pred cCCCChhhhhhhhcccccCCceEEEecc-----hhHHHHHHHHHhhcCc
Q 008748 476 ERGCSFEDLLIEMDRMLRPEGFVIIRDK-----SSIINYIRKFITALKW 519 (555)
Q Consensus 476 ~~~c~~~~~~~e~drilrp~g~~i~rd~-----~~~~~~~~~~~~~~~w 519 (555)
+...+|-|+-|+|||||++++... ......+..+.....|
T Consensus 132 ----d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (279)
T 3ccf_A 132 ----EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGI 176 (279)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTC
T ss_pred ----CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCC
Confidence 477899999999999999998632 2344444444444444
No 332
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.38 E-value=0.00043 Score=67.29 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=83.4
Q ss_pred ceeEeeccCCcchhhhhccC-CCceEEEecccCCC-CchhHHh----hccc--cchhcccccCCCC---CCCccchhhcc
Q 008748 400 FRNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMS-ARLKIIY----DRGL--IGTVHDWCESFST---YPRTYDLLHAW 468 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~-~~~wvmnv~p~~~~-~~l~~i~----~rgl--~g~~~~~ce~~~t---yprtydl~h~~ 468 (555)
-.+|+|++||.|.++..|.. .+-. .|+-++.. ..+.+.- ..|+ |-+++.=.+.++. .+.+||+|.+.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHL--HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 35899999999988877762 2222 35555543 3333322 2354 3333322233332 35789999976
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEecc---hhHHHHHHHHHhhcCccceec-ccccccccCCCCCceEEEEE
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK---SSIINYIRKFITALKWDGWLS-EVEPRIDALSSSEERVLIAK 544 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~---~~~~~~~~~~~~~~~w~~~~~-~~~~~~~~~~~~~~~~l~~~ 544 (555)
.+ .++..++-++-|+|+|||.+++-+. .+.+.++.+.++...++.... .+. -|.......+++.+
T Consensus 149 ~~--------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 149 AV--------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFK---LPIEESDRNIMVIR 217 (240)
T ss_dssp CC--------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEE---CTTTCCEEEEEEEE
T ss_pred cc--------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEe---cCCCCCceEEEEEE
Confidence 63 3478899999999999999998653 344566667777777765211 111 12222345677778
Q ss_pred eccccc
Q 008748 545 KKLWDE 550 (555)
Q Consensus 545 k~~w~~ 550 (555)
|.=.++
T Consensus 218 k~~~~~ 223 (240)
T 1xdz_A 218 KIKNTP 223 (240)
T ss_dssp ECSCCC
T ss_pred ecCCCC
Confidence 765444
No 333
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.38 E-value=0.00013 Score=71.71 Aligned_cols=98 Identities=19% Similarity=0.296 Sum_probs=65.0
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCCCCCCCccchhhccccccccccC
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER 477 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~ 477 (555)
.-.+|+|++||.|.++..|..... +|+-++.. ..+...-++..--....=.+.++.-+.+||+|-+.+.+-.+..+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 345899999999999999987642 55556543 55555555543101111122234224689999987654323222
Q ss_pred CCChhhhhhhhcccccCCceEEEec
Q 008748 478 GCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 478 ~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
...+|-|+-|+|+|||.+++..
T Consensus 131 ---~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 131 ---KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCeEEEEEe
Confidence 7899999999999999999864
No 334
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.38 E-value=0.00053 Score=66.03 Aligned_cols=90 Identities=8% Similarity=-0.045 Sum_probs=61.5
Q ss_pred CEEEEECCCCcHHHHHHhc---CCCccccCChhhhhHHHHHHHHHcCC----CeEEEEeCCCC---------------CC
Q 008748 157 RNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGI----PSTLGVLGTKR---------------LP 214 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~---~~V~~vdis~~dls~a~i~~A~~rg~----~v~~~~~d~~~---------------Lp 214 (555)
++|||+||| +.+..|++ ..|+++|.++.....++..++ +.+. ++.+..+++.. ++
T Consensus 32 ~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp SEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 589999985 56666664 478899998877766654444 3343 57888888543 22
Q ss_pred --------C-CCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEE
Q 008748 215 --------Y-PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 255 (555)
Q Consensus 215 --------~-~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvi 255 (555)
. ..++||+|+.-.. .....+..+.+.|+|||++++
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEE
T ss_pred HHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEE
Confidence 1 2368999996541 112466677899999999976
No 335
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.37 E-value=6.1e-05 Score=76.92 Aligned_cols=70 Identities=13% Similarity=0.122 Sum_probs=49.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCC--CC---CCCccEEEec
Q 008748 156 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YP---SRSFELAHCS 226 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp--~~---d~sFDlVv~s 226 (555)
..+|||+|||+|.++..++++ .|+++|+++.++..+..+.. ..+.++.+..+|+..++ +. .++||.|++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~-~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK-EFSDRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG-GGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 358999999999999998863 58888888888766653332 22356788888876664 11 1468887753
No 336
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.37 E-value=0.00032 Score=63.99 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=76.5
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----ccc---chhcccccCCCCCCCccchhhccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GLI---GTVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl~---g~~~~~ce~~~typrtydl~h~~~ 469 (555)
.-..|+|++||.|.++..|... |- ..|+-++-. ..+...-++ |+- -+..|..+.++..+.+||+|.+.+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 3468999999999999988665 32 245555543 444443332 432 222344455555447899999877
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEecc-hhHHHHHHHHHhhcCccce
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITALKWDGW 522 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~-~~~~~~~~~~~~~~~w~~~ 522 (555)
.+.. ..++-++-|+|+|||.+++.+. .+-...+.+++....+++.
T Consensus 103 ~~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 103 GLTA--------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp -TTC--------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred cccH--------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 6652 6789999999999999998753 4556677777777766653
No 337
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.37 E-value=0.00038 Score=68.12 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=82.2
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCC-CCchhHHhhcc-ccc-----hhcccc-cCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDRG-LIG-----TVHDWC-ESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~~~l~~i~~rg-l~g-----~~~~~c-e~~~typrtydl~h~~~~~s 472 (555)
..|+|++||.|+|+..|.....- .|+-+|- ++.|.....+. -++ -+...+ +.++. .-+|..-.+-+|+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 47999999999999888765422 4566664 35555533321 011 111112 33322 0135555555555
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEe-------------------cc---hhHHHHHHHHHhhcCccceeccccccc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIR-------------------DK---SSIINYIRKFITALKWDGWLSEVEPRI 530 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~r-------------------d~---~~~~~~~~~~~~~~~w~~~~~~~~~~~ 530 (555)
. +..+|-|+-|+|+|||.+++- |. ...++++.+++....|++......+-.
T Consensus 115 ~-------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~ 187 (232)
T 3opn_A 115 S-------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIK 187 (232)
T ss_dssp C-------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSC
T ss_pred h-------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCC
Confidence 2 478999999999999999874 11 135678888898888987544433333
Q ss_pred ccCCCCCceEEEEEec
Q 008748 531 DALSSSEERVLIAKKK 546 (555)
Q Consensus 531 ~~~~~~~~~~l~~~k~ 546 (555)
++. .+-|-++.++|+
T Consensus 188 g~~-gn~e~l~~~~~~ 202 (232)
T 3opn_A 188 GGA-GNVEFLVHLLKD 202 (232)
T ss_dssp BTT-TBCCEEEEEEES
T ss_pred CCC-CCHHHHHHHhhc
Confidence 333 356778888874
No 338
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.34 E-value=0.00023 Score=65.82 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=70.5
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hccc--cchhcccccCCCCC-CCccchhhcc-ccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL--IGTVHDWCESFSTY-PRTYDLLHAW-KVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl--~g~~~~~ce~~~ty-prtydl~h~~-~~~ 471 (555)
..|+|++||.|.++..|.+. .-.|+-++-. .-+...- +.|+ +-+.++-.+.+..+ +.+||+|..+ +.+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 47999999999999999876 3356666643 4444332 2354 33444444553323 5689999655 322
Q ss_pred cccc----cCCCChhhhhhhhcccccCCceEEEecc------hhHHHHHHHHHhhcC---ccc
Q 008748 472 SEIE----ERGCSFEDLLIEMDRMLRPEGFVIIRDK------SSIINYIRKFITALK---WDG 521 (555)
Q Consensus 472 s~~~----~~~c~~~~~~~e~drilrp~g~~i~rd~------~~~~~~~~~~~~~~~---w~~ 521 (555)
.... ...-....+|-|+-|+|+|||.+++-.- .+....+.+.+..+. |.+
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 163 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTA 163 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEE
Confidence 2100 0001134567899999999999987532 234456666666665 655
No 339
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.34 E-value=0.00025 Score=80.78 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=68.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC-------CCccccCChhhhhHHHHHHHHH-----cCCCe-EEEEeCCCCC-CCCCCCcc
Q 008748 156 IRNVLDVGCGVASFGAYLLSH-------DIIAMSLAPNDVHENQIQFALE-----RGIPS-TLGVLGTKRL-PYPSRSFE 221 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~-------~V~~vdis~~dls~a~i~~A~~-----rg~~v-~~~~~d~~~L-p~~d~sFD 221 (555)
..+|||.|||+|.++..++.. .+.|+|+++..+..+..+.... .+... .+...|+... +...+.||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 468999999999999888753 3678888887766552222211 12222 4444444432 23456899
Q ss_pred EEEecccccc-ccc--------------------------c-hHHHHHHHHhhcCCCcEEEEEcCCCC
Q 008748 222 LAHCSRCRID-WLQ--------------------------R-DGILLLELDRLLRPGGYFVYSSPEAY 261 (555)
Q Consensus 222 lVv~s~~~l~-~~~--------------------------d-~~~~L~el~RvLkPGG~lvis~P~~~ 261 (555)
+|+++--... +.. + ...++..+.+.|+|||+++++.|..+
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 9998532111 000 0 13368889999999999999999864
No 340
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.33 E-value=0.00067 Score=68.71 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=59.7
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCCCCccEEEeccccc
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
+..+|||+||++|.|+..+++. .|.++|+...+...... ....+.++.....+.....+..+.+|+|+|.. +.
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~-AP 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDI-GE 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEECSCCTTTSCCCCCSEEEECC-CC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeecCceeeecCCCCcCEEeecC-cC
Confidence 3469999999999999999974 35566665422100000 00001122223333333334567899999854 34
Q ss_pred c----cccch--HHHHHHHHhhcCCC-cEEEEEcCC
Q 008748 231 D----WLQRD--GILLLELDRLLRPG-GYFVYSSPE 259 (555)
Q Consensus 231 ~----~~~d~--~~~L~el~RvLkPG-G~lvis~P~ 259 (555)
+ ..+.. ..+|.-+.++|+|| |.|++-.-.
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 3 11111 22566678899999 999997543
No 341
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.33 E-value=9.9e-05 Score=74.07 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=63.0
Q ss_pred cceeEeeccCCcchhhhhccC--CCceEEEecccCCC-CchhHHhhc-----cccc---hhcccccCCCCCC------Cc
Q 008748 399 TFRNVMDMNSNLGGFAAALKD--KDVWVMNVAPVRMS-ARLKIIYDR-----GLIG---TVHDWCESFSTYP------RT 461 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~--~~~wvmnv~p~~~~-~~l~~i~~r-----gl~g---~~~~~ce~~~typ------rt 461 (555)
.-.+|+|++||.|.++..|.. .+. -+|+-++-. ..+...-++ |+.. ..+.=.+.++.-. .+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPF--EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCC--SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 457899999999999999983 222 245555543 444444333 2222 1111112222112 69
Q ss_pred cchhhccccccccccCCCChhhhhhhhcccccCCceEEE
Q 008748 462 YDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 462 ydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
||+|++..++..+ +...+|-|+-|+|||||.+++
T Consensus 114 fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 114 IDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 9999999988743 589999999999999999998
No 342
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.33 E-value=5.4e-05 Score=75.29 Aligned_cols=95 Identities=17% Similarity=0.216 Sum_probs=66.5
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc---cchhcccccCCC-CCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL---IGTVHDWCESFS-TYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl---~g~~~~~ce~~~-typrtydl~h~~~~~ 471 (555)
..|+|++||.|.++..|..... .|+-++-. ..+...-++ |+ +-+++.=.+.++ ..+.+||+|.+.++|
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 5799999999999999987632 55555543 455544333 44 222222223333 345799999999998
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
..+. +...+|-|+-|+|+|||.+++.+
T Consensus 147 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 147 EWVA----DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGCS----CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccc----CHHHHHHHHHHHcCCCeEEEEEE
Confidence 7542 36889999999999999999875
No 343
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.32 E-value=0.00013 Score=71.12 Aligned_cols=100 Identities=16% Similarity=0.207 Sum_probs=68.5
Q ss_pred cCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc----ccchhcccccCCCCCCCccchhhccc
Q 008748 395 AQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG----LIGTVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 395 ~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg----l~g~~~~~ce~~~typrtydl~h~~~ 469 (555)
+....=.+|+|++||.|.++..|.....- +|+-++-. ..+...-++. +--+..|. +.++.-+.+||+|.+.+
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 116 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSL 116 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEES
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEch
Confidence 44434578999999999999998765321 45555543 4455444442 11122232 33443357999999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
+|..+ -+...+|-|+-|+|+|||.+++.
T Consensus 117 ~l~~~----~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 117 ALHYI----ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CGGGC----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhh----hhHHHHHHHHHHHcCCCcEEEEE
Confidence 88754 24789999999999999999996
No 344
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.32 E-value=6.4e-05 Score=75.38 Aligned_cols=97 Identities=11% Similarity=0.203 Sum_probs=59.4
Q ss_pred eeEeeccCCcchhhhh----ccC-CCceEEEecccCCC-CchhHHhhc-----cccchhcccc----cCCC------CCC
Q 008748 401 RNVMDMNSNLGGFAAA----LKD-KDVWVMNVAPVRMS-ARLKIIYDR-----GLIGTVHDWC----ESFS------TYP 459 (555)
Q Consensus 401 rn~~dm~~~~g~faa~----l~~-~~~wvmnv~p~~~~-~~l~~i~~r-----gl~g~~~~~c----e~~~------typ 459 (555)
..|+|++||.|.++.. |.. .|-+...++-++.+ .-|...-+| |+-.+--.|. +.+. .-+
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKEL 133 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCC
Confidence 4799999999986543 222 13222233555543 444443333 3322111121 1121 114
Q ss_pred CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 460 RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
.+||+|++..++-.+. +....|-||-|+|||||.+++-
T Consensus 134 ~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 134 QKWDFIHMIQMLYYVK----DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCEEEEEEESCGGGCS----CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEEeeeeeecC----CHHHHHHHHHHHcCCCcEEEEE
Confidence 7999999999887442 3788999999999999999985
No 345
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.32 E-value=0.00014 Score=72.60 Aligned_cols=100 Identities=12% Similarity=0.084 Sum_probs=65.2
Q ss_pred CcceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----cc-cc-hhcccccCCCCCCCccchhhccc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GL-IG-TVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl-~g-~~~~~ce~~~typrtydl~h~~~ 469 (555)
..-.+|+|++||.|.++..|.+. |- ...|+-++-. ..+...-++ |+ +- +..|.. .++ ++.+||+||+..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~ 97 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPE-GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICHA 97 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCT-TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEES
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEECC
Confidence 34568999999999999999865 21 0133334432 333322221 21 11 222333 333 478999999999
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEecch
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 504 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~ 504 (555)
++..+. +...+|-++-|+|+|||++++.+..
T Consensus 98 ~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMT----TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCS----SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCC----CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 887442 3679999999999999999987644
No 346
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.28 E-value=0.0001 Score=70.65 Aligned_cols=117 Identities=12% Similarity=0.147 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc--ccchhcccccC
Q 008748 378 GIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG--LIGTVHDWCES 454 (555)
Q Consensus 378 ~~w~~~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg--l~g~~~~~ce~ 454 (555)
..|....+.+...+...+ ..-.+|+|++||.|.++..|.+.-. +|+-++.. ..+...-++. +--+..|.. .
T Consensus 21 ~~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~ 94 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-D 94 (239)
T ss_dssp CCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-T
T ss_pred hhHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-H
Confidence 567766666555554333 2346899999999999998875421 45555543 4455444441 111222332 2
Q ss_pred CCCCCCccchhh-ccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 455 FSTYPRTYDLLH-AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 455 ~~typrtydl~h-~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
++. +.+||+|. +.++|..+.. .-....+|-++-|+|+|||.+++.+
T Consensus 95 ~~~-~~~~D~v~~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 95 FRL-GRKFSAVVSMFSSVGYLKT-TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCC-SSCEEEEEECTTGGGGCCS-HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ccc-CCCCcEEEEcCchHhhcCC-HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 333 78999999 4546654321 1236788999999999999999974
No 347
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.28 E-value=0.00015 Score=69.75 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=65.5
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc----ccchhcccccCCCCCCCccchhhccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG----LIGTVHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg----l~g~~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
.-.+|+|++||.|.++..|.....- +|+-++-. ..+...-++. +--+..|.. .++.-+.+||+|.+.++|..
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLD-KLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGG-GCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChh-hccCCCCCceEEEEeccccc
Confidence 4468999999999999998765321 44444432 4444444432 211222333 34433579999999988874
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEec
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+. +...+|-++-|+|+|||.+++.+
T Consensus 120 ~~----~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE----DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc----hHHHHHHHHHHhcCcCcEEEEEe
Confidence 42 47889999999999999999865
No 348
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.26 E-value=0.0012 Score=66.75 Aligned_cols=133 Identities=12% Similarity=0.126 Sum_probs=80.1
Q ss_pred CCEEEEECCCCcHHHHHHh---------cCCCccccCChh--------------------------hhhHHHHHHHHHcC
Q 008748 156 IRNVLDVGCGVASFGAYLL---------SHDIIAMSLAPN--------------------------DVHENQIQFALERG 200 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La---------~~~V~~vdis~~--------------------------dls~a~i~~A~~rg 200 (555)
++.|||+|+..|..+..|+ ++.|+++|.... .+..+..++ .+.+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~-~~~g 185 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNF-RNYD 185 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHH-HHTT
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHH-HHcC
Confidence 4689999999998777664 346777775321 111122222 2333
Q ss_pred ---CCeEEEEeCCC-CCC-CCCCCccEEEecccccccccchHHHHHHHHhhcCCCcEEEEEcCCCCCCChhhHHHHHHHH
Q 008748 201 ---IPSTLGVLGTK-RLP-YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMY 275 (555)
Q Consensus 201 ---~~v~~~~~d~~-~Lp-~~d~sFDlVv~s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~P~~~~~~~e~~~~~~~l~ 275 (555)
.++.++.+++. .+| +++++||+|+.-.. . + ......|..+...|+|||++++-.-.. .+...+ .+.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD-~-y-~~~~~~Le~~~p~L~pGGiIv~DD~~~---~~G~~~---Av~ 256 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD-L-Y-ESTWDTLTNLYPKVSVGGYVIVDDYMM---CPPCKD---AVD 256 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC-S-H-HHHHHHHHHHGGGEEEEEEEEESSCTT---CHHHHH---HHH
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC-c-c-ccHHHHHHHHHhhcCCCEEEEEcCCCC---CHHHHH---HHH
Confidence 45889999853 344 44578999995432 1 1 223457999999999999999855321 233333 444
Q ss_pred HHHHhcCcE--EEEEeeceEEeecC
Q 008748 276 DLLKSMCWK--IVSKKDQTVIWAKP 298 (555)
Q Consensus 276 ~l~~~~gw~--vv~~~~~~~iw~KP 298 (555)
++.+..++. +........+|+|+
T Consensus 257 Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 257 EYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHhcCCceEEEEecCEEEEEEeC
Confidence 455555543 33334445677775
No 349
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.25 E-value=0.00013 Score=66.69 Aligned_cols=108 Identities=7% Similarity=0.048 Sum_probs=75.5
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc--c-chhcccccCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL--I-GTVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl--~-g~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
.+|+|++||.|.++..|.. +. .+|+-++-. ..+...-++ |+ + -+-.|+.+.++. .+||+|.+++.
T Consensus 37 ~~vLdiG~G~G~~~~~l~~-~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~-- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAK-RC--KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT-- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHT-TS--SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC--
T ss_pred CEEEEeCCCCCHHHHHHHh-cC--CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc--
Confidence 4899999999999999987 32 244445432 333333222 33 1 122344443332 58999998876
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCcccee
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGWL 523 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~~~ 523 (555)
..+..++-++-|+ |||.+++-+ ..+.+.++.+.++...|++..
T Consensus 110 ------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 110 ------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDA 153 (183)
T ss_dssp ------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEE
T ss_pred ------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEE
Confidence 3478899999998 999999986 777788899999988888753
No 350
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.24 E-value=0.00013 Score=68.61 Aligned_cols=129 Identities=12% Similarity=0.097 Sum_probs=79.1
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccc--cchh-cccccCCCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGL--IGTV-HDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl--~g~~-~~~ce~~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++.+|... |-. +|+-++.. ..+...- ..|+ +-++ .|+.+ +. -+.+||+|.+.++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 47999999999998888642 322 45555533 3333322 2244 2222 23333 22 1368999987553
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEecchhHHHHHHHHHhhcCcccee-cccccccccCCCCCceEEEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDGWL-SEVEPRIDALSSSEERVLIAKKK 546 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~~~~~~~~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~l~~~k~ 546 (555)
..+..++-++-|+|+|||.+++-.....-++++++.. .|+... ..+. -+...+...++++.|+
T Consensus 142 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~---~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 -------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQ---VPALDGERHLVVIKAN 205 (207)
T ss_dssp -------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEE---CC--CCEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeec---cCCCCCceEEEEEEec
Confidence 2367899999999999999999876666777777776 676521 0001 1112345777887774
No 351
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.22 E-value=0.00018 Score=67.29 Aligned_cols=140 Identities=9% Similarity=0.022 Sum_probs=82.0
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc----cc---cchhcccccCCC-CCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR----GL---IGTVHDWCESFS-TYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r----gl---~g~~~~~ce~~~-typrtydl~h~~~ 469 (555)
.+|+|++||.|.++..|... |-- +|+-++.. ..+...-++ |+ +-+.+.=.+.+. ..+.+||+|-++.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 37999999999999888653 221 55666643 445443332 43 222222122333 3457999998776
Q ss_pred cccccccCCC------ChhhhhhhhcccccCCceEEEec------chhHHHHHHHHHhhcC---ccceecccccccccCC
Q 008748 470 VFSEIEERGC------SFEDLLIEMDRMLRPEGFVIIRD------KSSIINYIRKFITALK---WDGWLSEVEPRIDALS 534 (555)
Q Consensus 470 ~~s~~~~~~c------~~~~~~~e~drilrp~g~~i~rd------~~~~~~~~~~~~~~~~---w~~~~~~~~~~~~~~~ 534 (555)
.|-. ..... ....++-++-|+|+|||.+++-+ ..+....+.+.+..+. |++..... -. ..
T Consensus 102 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~--~~--~~ 176 (197)
T 3eey_A 102 GYLP-SGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDF--IN--QA 176 (197)
T ss_dssp SBCT-TSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEE--TT--CC
T ss_pred Cccc-CcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEe--cc--Cc
Confidence 5410 00000 13468999999999999999874 2234566667776665 66532221 11 11
Q ss_pred CCCceEEEEEecc
Q 008748 535 SSEERVLIAKKKL 547 (555)
Q Consensus 535 ~~~~~~l~~~k~~ 547 (555)
..+..++|.+|..
T Consensus 177 ~~pp~~~~~~~~~ 189 (197)
T 3eey_A 177 NCPPILVCIEKIS 189 (197)
T ss_dssp SCCCEEEEEEECC
T ss_pred cCCCeEEEEEEcc
Confidence 2466788887754
No 352
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.21 E-value=0.00024 Score=66.92 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=75.9
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhh----ccc--cc-hhcccccCCCCCCCccchhhccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYD----RGL--IG-TVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~----rgl--~g-~~~~~ce~~~typrtydl~h~~~ 469 (555)
.-.+|+|++||.|.++..|... |- -+|+-++.. ..+...-+ .|+ +- +..|..+.+... .+||++-++.
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~ 116 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPN--GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGG 116 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTT--SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECC
Confidence 3468999999999999888653 21 134445532 44444333 243 11 223333443322 5799988766
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCccce
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGW 522 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~~ 522 (555)
.+. .+..++-++-|+|+|||.+++.. ..+...++.++++...|++.
T Consensus 117 ~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 117 SGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp CTT-------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEE
T ss_pred CCc-------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCcee
Confidence 543 47889999999999999999974 45678888888888888643
No 353
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.20 E-value=0.00029 Score=66.88 Aligned_cols=98 Identities=22% Similarity=0.307 Sum_probs=63.0
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----c--ccchhcccccCCCCCCCccchhhcccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----G--LIGTVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----g--l~g~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
-.+|+|++||.|.++..|...-. +|+-++-. ..+...-++ | +--+..|..+ ++.-+.+||+|.+.+++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESCGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CCCCCCcEEEEEEcCchH
Confidence 45899999999999988875532 56655543 444433332 1 1112233333 232246999999988743
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
.... -+...+|-++-|+|+|||.+++-+.
T Consensus 115 ~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 115 HFEP--LELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GCCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCH--HHHHHHHHHHHHHcCCCcEEEEEec
Confidence 2111 1356899999999999999998754
No 354
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.20 E-value=0.00012 Score=70.19 Aligned_cols=97 Identities=21% Similarity=0.304 Sum_probs=62.3
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----c-ccchhcccccCCCCCCCccchhhcccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----G-LIGTVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----g-l~g~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
=.+|+|++||.|.++.+|... |- .+|+-++-. ..+...-++ | +--+-.|. +.++ ++.+||+|.+..+|.
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPE--ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADY-SKYD-FEEKYDMVVSALSIH 120 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTT--CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCT-TTCC-CCSCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHhhccCCCEEEEeCch-hccC-CCCCceEEEEeCccc
Confidence 368999999999999988653 21 244555542 444444333 1 11122232 2222 238999999998887
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.+.. -....+|-|+-|+|+|||.+++.|
T Consensus 121 ~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLED--EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5421 112358999999999999999976
No 355
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.20 E-value=0.0004 Score=64.96 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=86.7
Q ss_pred HhHhhHHHHHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCC-CceEEEecccCC-CCchhHHhh----cc--ccc
Q 008748 375 EDIGIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYD----RG--LIG 446 (555)
Q Consensus 375 ~d~~~w~~~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~-~~~l~~i~~----rg--l~g 446 (555)
.+++.|.+.+-.+... ...=..|+|++||.|.++.+|... +- .+|+-++- +..+...-+ .| +-=
T Consensus 12 ~~~~~~~~~~~~~l~~------~~~~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 83 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKR------MPSGTRVIDVGTGSGCIAVSIALACPG--VSVTAVDLSMDALAVARRNAERFGAVVDW 83 (215)
T ss_dssp HHHHHHHHHHHHHHTT------CCTTEEEEEEESSBCHHHHHHHHHCTT--EEEEEEECC-------------------C
T ss_pred ccHHHHHHHHHHHhhh------cCCCCEEEEecCCHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHHhCCceEE
Confidence 4566666555443221 123468999999999999888653 21 23444443 222322211 12 222
Q ss_pred hhcccccCCCC---CCCccchhhccccccccc------c------CCCC----------hhhhhhhhcccccCCce-EEE
Q 008748 447 TVHDWCESFST---YPRTYDLLHAWKVFSEIE------E------RGCS----------FEDLLIEMDRMLRPEGF-VII 500 (555)
Q Consensus 447 ~~~~~ce~~~t---yprtydl~h~~~~~s~~~------~------~~c~----------~~~~~~e~drilrp~g~-~i~ 500 (555)
+..|+.+.+.. .+.+||+|-++--|.... . .... +..++-++-|+|+|||. +++
T Consensus 84 ~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 84 AAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp CHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred EEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 33455554332 237899999865442110 0 0011 16788999999999999 777
Q ss_pred ecchhHHHHHHHHHh--hcCccceecccccccccCCCCCceEEEEEec
Q 008748 501 RDKSSIINYIRKFIT--ALKWDGWLSEVEPRIDALSSSEERVLIAKKK 546 (555)
Q Consensus 501 rd~~~~~~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k~ 546 (555)
--.......+.+++. .-.|... ... . ...+.+++++++|.
T Consensus 164 ~~~~~~~~~~~~~l~~~~~gf~~~-~~~---~--~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 164 EVGHNQADEVARLFAPWRERGFRV-RKV---K--DLRGIDRVIAVTRE 205 (215)
T ss_dssp ECTTSCHHHHHHHTGGGGGGTEEC-CEE---E--CTTSCEEEEEEEEC
T ss_pred EECCccHHHHHHHHHHhhcCCceE-EEE---E--ecCCCEEEEEEEEc
Confidence 655556777788887 6666431 111 1 11356899999875
No 356
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.19 E-value=0.00023 Score=70.99 Aligned_cols=62 Identities=16% Similarity=0.207 Sum_probs=45.3
Q ss_pred CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecc----------------hhHHHHHHHHHhhcCccc
Q 008748 460 RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK----------------SSIINYIRKFITALKWDG 521 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~----------------~~~~~~~~~~~~~~~w~~ 521 (555)
.+||+|-+..+|..+...--+...+|-||-|+|||||++++.+. .-..+++++++..-.++.
T Consensus 173 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 173 LPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp SSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 57999999988874221111367899999999999999998531 113677888888777765
No 357
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.18 E-value=0.00034 Score=68.86 Aligned_cols=120 Identities=13% Similarity=0.142 Sum_probs=80.1
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHH----hhccc---cchh-cccccCCCCC-CCccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKII----YDRGL---IGTV-HDWCESFSTY-PRTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i----~~rgl---~g~~-~~~ce~~~ty-prtydl~h~~~~ 470 (555)
.+|+|++||.|.++..|....-. +|+-++-. ..+... -..|+ +-++ .|..+....+ +.+||+|-++--
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 57999999999999988776433 56666643 334332 22244 2222 2333332223 479999998755
Q ss_pred cccc----------------ccCCCChhhhhhhhcccccCCceEEEecchhHHHHHHHHHhhcCccce
Q 008748 471 FSEI----------------EERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDGW 522 (555)
Q Consensus 471 ~s~~----------------~~~~c~~~~~~~e~drilrp~g~~i~rd~~~~~~~~~~~~~~~~w~~~ 522 (555)
|... ....+.+..++-++-|+|+|||.+++--..+.+.++...+....|+..
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 4311 011245778999999999999999997777788889899988888864
No 358
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.17 E-value=0.00012 Score=71.45 Aligned_cols=121 Identities=12% Similarity=0.068 Sum_probs=76.1
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----c------------------------------
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----G------------------------------ 443 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----g------------------------------ 443 (555)
.-.+|+|++||.|.++..|..... -+|+-++-. ..+...-++ +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 346899999999999988875433 356666643 334433221 1
Q ss_pred -cc-c-hhcccccCCCCCC---CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecchh------------
Q 008748 444 -LI-G-TVHDWCESFSTYP---RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS------------ 505 (555)
Q Consensus 444 -l~-g-~~~~~ce~~~typ---rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~------------ 505 (555)
-| - +-.|..+..+.-+ .+||+|.+..++..+..+.=....+|-++-|+|+|||.+|+.+...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 02 1 1223333222123 7999999988876322111136788999999999999999875211
Q ss_pred ----HHHHHHHHHhhcCccc
Q 008748 506 ----IINYIRKFITALKWDG 521 (555)
Q Consensus 506 ----~~~~~~~~~~~~~w~~ 521 (555)
..+.+.+++....+++
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~ 233 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTI 233 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEE
T ss_pred ccccCHHHHHHHHHHCCCEE
Confidence 2447888888777776
No 359
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.16 E-value=0.00047 Score=68.05 Aligned_cols=162 Identities=13% Similarity=0.030 Sum_probs=92.8
Q ss_pred HhhHHHHHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhH----Hhhccc--cchh
Q 008748 377 IGIWQVRVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKI----IYDRGL--IGTV 448 (555)
Q Consensus 377 ~~~w~~~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~----i~~rgl--~g~~ 448 (555)
.+.|.+++-.-...+. .+....-.+|+|++||.|.++..|... |-+ .|+-++.. .-+.+ +-+-|+ |=++
T Consensus 59 ~~~~~~~~~ds~~~l~-~~~~~~~~~vLDiG~G~G~~~i~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~ 135 (249)
T 3g89_A 59 EEVVVKHFLDSLTLLR-LPLWQGPLRVLDLGTGAGFPGLPLKIVRPEL--ELVLVDATRKKVAFVERAIEVLGLKGARAL 135 (249)
T ss_dssp HHHHHHHHHHHHGGGG-SSCCCSSCEEEEETCTTTTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHhhceeeechhhhc-ccccCCCCEEEEEcCCCCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCceEEE
Confidence 4566655433223232 122233468999999999887776532 322 34555543 33333 223355 3334
Q ss_pred cccccCCC---CCCCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEec---chhHHHHHHHHHhhcCccce
Q 008748 449 HDWCESFS---TYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD---KSSIINYIRKFITALKWDGW 522 (555)
Q Consensus 449 ~~~ce~~~---typrtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd---~~~~~~~~~~~~~~~~w~~~ 522 (555)
|.=.|.+. .++.+||+|-+..+ .++..++-++-|+|+|||.+++-. ..+-+.+++..++.+.++..
T Consensus 136 ~~d~~~~~~~~~~~~~fD~I~s~a~--------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 136 WGRAEVLAREAGHREAYARAVARAV--------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLG 207 (249)
T ss_dssp ECCHHHHTTSTTTTTCEEEEEEESS--------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEE
T ss_pred ECcHHHhhcccccCCCceEEEECCc--------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEE
Confidence 43334443 34579999986543 247788899999999999988743 34556667777777788763
Q ss_pred ecccccccccCCCCCceEEEEEecccccc
Q 008748 523 LSEVEPRIDALSSSEERVLIAKKKLWDEE 551 (555)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~l~~~k~~w~~~ 551 (555)
. ..+ -.-|.......+++.+|.=.++.
T Consensus 208 ~-~~~-~~~p~~~~~R~l~~~~k~~~t~~ 234 (249)
T 3g89_A 208 E-VLA-LQLPLSGEARHLVVLEKTAPTPP 234 (249)
T ss_dssp E-EEE-EECTTTCCEEEEEEEEECSCCCT
T ss_pred E-EEE-eeCCCCCCcEEEEEEEeCCCCCC
Confidence 1 111 11122223445677777655553
No 360
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.16 E-value=0.00025 Score=67.40 Aligned_cols=101 Identities=15% Similarity=0.168 Sum_probs=65.2
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----cc-------cch-hcccccCCCCCCCccchh
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GL-------IGT-VHDWCESFSTYPRTYDLL 465 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl-------~g~-~~~~ce~~~typrtydl~ 465 (555)
-..|+|++||.|.|+.+|... +.. +|+-++-. ..+...-++ |+ +-+ -.|. +..+.-+.+||+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v 106 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFE--QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAA 106 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCS--EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCC--EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEE
Confidence 358999999999999999753 321 45555533 444444333 22 111 1222 2222223689999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCceEEEecchh
Q 008748 466 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS 505 (555)
Q Consensus 466 h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~ 505 (555)
-+..+|..+.. -.+..+|-++-|+|+|||.+++-+..+
T Consensus 107 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 107 TVIEVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp EEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred eeHHHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 99998875432 235688999999999999998876543
No 361
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.15 E-value=0.00041 Score=66.43 Aligned_cols=120 Identities=14% Similarity=0.083 Sum_probs=76.5
Q ss_pred eeEeeccCC-cchhhhhccCCCceEEEecccCCC-CchhHHh----hccc-cchhc-ccccCCCCCC-Cccchhhccccc
Q 008748 401 RNVMDMNSN-LGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL-IGTVH-DWCESFSTYP-RTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~-~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl-~g~~~-~~ce~~~typ-rtydl~h~~~~~ 471 (555)
.+|+|++|| .|.++.+|.... .-+|+-++-. ..+...- ..|+ +-+++ |+ +.+..+| .+||+|-++-.|
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCCC
Confidence 579999999 999988876542 2345555543 3444322 2343 22222 32 1233344 799999987655
Q ss_pred ccccc---------------CCCChhhhhhhhcccccCCceEEE--ecchhHHHHHHHHHhhcCcccee
Q 008748 472 SEIEE---------------RGCSFEDLLIEMDRMLRPEGFVII--RDKSSIINYIRKFITALKWDGWL 523 (555)
Q Consensus 472 s~~~~---------------~~c~~~~~~~e~drilrp~g~~i~--rd~~~~~~~~~~~~~~~~w~~~~ 523 (555)
..... ....+..++-++-|+|+|||.+++ -...+...++.+.+....|++..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKD 202 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEE
Confidence 42111 001136789999999999999997 44557788999999999998754
No 362
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.14 E-value=0.00024 Score=65.19 Aligned_cols=112 Identities=15% Similarity=0.139 Sum_probs=75.7
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccc---c-chhcccccCCCCCCCccchhhcccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL---I-GTVHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl---~-g~~~~~ce~~~typrtydl~h~~~~ 470 (555)
-.+|+|++||.|.++..|...- -+|+-++.. ..+...-+ .|+ + -+-.|+.+.++.. .+||+|-+++.
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCc
Confidence 3589999999999998887654 355555543 33333322 233 1 1123444433321 38999988776
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCccce
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGW 522 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~~ 522 (555)
+. .+..++-++-|+|+|||.+++-+ ..+...++.+++....|++.
T Consensus 110 ~~-------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 110 GG-------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp TT-------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCE
T ss_pred hH-------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceE
Confidence 54 26889999999999999999864 46677888888888777654
No 363
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.13 E-value=0.00026 Score=68.61 Aligned_cols=92 Identities=13% Similarity=0.258 Sum_probs=60.3
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccc---cch-hcccccCCC-CCCCccchhhcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGL---IGT-VHDWCESFS-TYPRTYDLLHAW 468 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl---~g~-~~~~ce~~~-typrtydl~h~~ 468 (555)
-.+|+|++||.|.++.+|... | ...|+-++.. ..+.+.- +.|+ |-+ ..|..+.++ ..+.+||+|..+
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD--DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 468999999999999998762 2 2355556543 3343322 2343 112 234444434 346799999865
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEE
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
.-. -....++-++-|+|||||.+++
T Consensus 150 ~~~-------~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 150 AAK-------AQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TTS-------SSHHHHHHHHGGGEEEEEEEEE
T ss_pred CcH-------HHHHHHHHHHHHhcCCCeEEEE
Confidence 422 2367788899999999999999
No 364
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.11 E-value=0.00016 Score=68.89 Aligned_cols=98 Identities=14% Similarity=0.290 Sum_probs=64.3
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccc-------cchhcccccCCCCCCCccchhhcc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL-------IGTVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl-------~g~~~~~ce~~~typrtydl~h~~ 468 (555)
..|+|++||.|.++.+|..... +|+-++-. ..+...-+ .|+ +-....=.+.++.-+.+||+|-+.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4799999999999999977632 56666543 44444333 333 122222223334335799999999
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+++..+... -....+|-++-|+|||||.+++.+
T Consensus 109 ~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 109 AFLTSVPDP-KERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp SCGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCCCH-HHHHHHHHHHHHHcCCCeEEEEEE
Confidence 888743211 112379999999999999999974
No 365
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.11 E-value=0.00066 Score=67.44 Aligned_cols=135 Identities=13% Similarity=0.220 Sum_probs=86.7
Q ss_pred eeEeeccCCcchhhhhccC-CCceEEEecccCCC-CchhHHhhc----cc--c-chhcccccCCCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMS-ARLKIIYDR----GL--I-GTVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~-~~~wvmnv~p~~~~-~~l~~i~~r----gl--~-g~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++.+|.. .|-+ +|+-++.. ..+.+.-++ |+ + =+..|+.+.++ +.+||+|-++--+
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 4799999999999988863 2332 45555543 444443332 33 1 22346655543 4689999987443
Q ss_pred cccc-----------cCC----------CChhhhhhhhcccccCCceEEEecchhHHHHHHHHHhhcCccceeccccccc
Q 008748 472 SEIE-----------ERG----------CSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDGWLSEVEPRI 530 (555)
Q Consensus 472 s~~~-----------~~~----------c~~~~~~~e~drilrp~g~~i~rd~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 530 (555)
.... ... -.+..++-++-|+|+|||++++.......+++++++....|+.. ... .
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v-~~~---~ 262 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDV-ETC---R 262 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTC-CEE---E
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEE-EEE---e
Confidence 2110 000 12356788999999999999998777777888888888778641 111 1
Q ss_pred ccCCCCCceEEEEEe
Q 008748 531 DALSSSEERVLIAKK 545 (555)
Q Consensus 531 ~~~~~~~~~~l~~~k 545 (555)
...+.+++++++|
T Consensus 263 --d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 263 --DYGDNERVTLGRY 275 (276)
T ss_dssp --CTTSSEEEEEEEC
T ss_pred --cCCCCCcEEEEEE
Confidence 1246789998875
No 366
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.09 E-value=0.00032 Score=68.11 Aligned_cols=115 Identities=17% Similarity=0.154 Sum_probs=71.3
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhcc--ccchhcccccCCCCCCCccchhhcccccccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDRG--LIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~rg--l~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
.-.+|+|++||.|.++.+|.+. |.. +|+-++-. ..+...-++. +--+..| .+.++ -+.+||+|++..+|..+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d-~~~~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN--VITGIDSDDDMLEKAADRLPNTNFGKAD-LATWK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT--SEEEEESCHHHHHHHHHHSTTSEEEECC-TTTCC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHhCCCcEEEECC-hhhcC-ccCCcCEEEEeCchhhC
Confidence 3468999999999999888653 111 33444432 4444444441 1111222 23344 46799999999888743
Q ss_pred ccCCCChhhhhhhhcccccCCceEEEecc----hhHHHHHHHHHhhcCccc
Q 008748 475 EERGCSFEDLLIEMDRMLRPEGFVIIRDK----SSIINYIRKFITALKWDG 521 (555)
Q Consensus 475 ~~~~c~~~~~~~e~drilrp~g~~i~rd~----~~~~~~~~~~~~~~~w~~ 521 (555)
. +...+|-|+-|+|+|||.+++... ......+..+.....|..
T Consensus 109 ~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (259)
T 2p35_A 109 P----DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKD 155 (259)
T ss_dssp T----THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGG
T ss_pred C----CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHH
Confidence 2 478899999999999999999742 112233444544445643
No 367
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.08 E-value=0.00017 Score=75.62 Aligned_cols=114 Identities=16% Similarity=0.150 Sum_probs=76.2
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc---------c-c----cchh-cccccCC------C
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR---------G-L----IGTV-HDWCESF------S 456 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r---------g-l----~g~~-~~~ce~~------~ 456 (555)
..|+|++||.|.++..|... |-. .|+-++-. ..+.+.-++ | + +-.. .|..+ + +
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~-l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG--KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN-LATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC--EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC-GGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH-hhhcccCC
Confidence 47999999999998887643 322 45555543 555555444 4 1 1122 23332 2 2
Q ss_pred CCCCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecch-----------------------hHHHHHHHH
Q 008748 457 TYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-----------------------SIINYIRKF 513 (555)
Q Consensus 457 typrtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~-----------------------~~~~~~~~~ 513 (555)
.-+.+||+|++..+|..+. +...+|-|+-|+|||||++++.|-. -..+++.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLST----NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRL 237 (383)
T ss_dssp CCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCC----CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHH
Confidence 2346999999999988432 3689999999999999999987421 123778888
Q ss_pred HhhcCccc
Q 008748 514 ITALKWDG 521 (555)
Q Consensus 514 ~~~~~w~~ 521 (555)
+..-.++.
T Consensus 238 l~~aGF~~ 245 (383)
T 4fsd_A 238 VAEAGFRD 245 (383)
T ss_dssp HHHTTCCC
T ss_pred HHHCCCce
Confidence 88777764
No 368
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.07 E-value=0.00034 Score=66.66 Aligned_cols=109 Identities=10% Similarity=-0.035 Sum_probs=71.0
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----cccc---chh-cccccCCCCCCCccchhhcccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLI---GTV-HDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~---g~~-~~~ce~~~typrtydl~h~~~~ 470 (555)
=..|+|++||.|.++..|... ...|+-++-. ..+...-+ .|+- -++ .|..+.+... .+||++-.++.
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~ 131 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGG 131 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSC
T ss_pred CCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCc
Confidence 357999999999999888665 2345555543 44444332 2443 122 2333323322 36888765542
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCccc
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDG 521 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~ 521 (555)
+ ... ++-++-|+|||||.+++.. ..+.+.++.++++...+++
T Consensus 132 ~--------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 132 G--------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQL 174 (204)
T ss_dssp C--------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEE
T ss_pred c--------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcE
Confidence 2 356 8999999999999999975 4667788888888777765
No 369
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.07 E-value=0.00017 Score=69.33 Aligned_cols=107 Identities=12% Similarity=0.145 Sum_probs=70.3
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc--ccchhcccccCCCCC-CCccchhhcccccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG--LIGTVHDWCESFSTY-PRTYDLLHAWKVFSEIEE 476 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg--l~g~~~~~ce~~~ty-prtydl~h~~~~~s~~~~ 476 (555)
..|+|++||.|.++..|.... ..|+-++-. ..+...-++. +-=+..|+.+.++.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 479999999999999998763 256666653 5565555551 222334555555532 4799999865
Q ss_pred CCCChhhhhhhhcccccCCceEEEecchhHHHHHHHHHhhcCcc
Q 008748 477 RGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWD 520 (555)
Q Consensus 477 ~~c~~~~~~~e~drilrp~g~~i~rd~~~~~~~~~~~~~~~~w~ 520 (555)
-+...+|-|+-|+|||||.++.-........+.+.+....++
T Consensus 119 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 119 --RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWD 160 (226)
T ss_dssp --SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCE
T ss_pred --CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCe
Confidence 146788999999999999999432222334455555544443
No 370
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.06 E-value=0.00032 Score=65.70 Aligned_cols=111 Identities=16% Similarity=0.203 Sum_probs=71.0
Q ss_pred eEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-cchhcccccCCCCCCCccchhhccccccccc
Q 008748 402 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-IGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 475 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-~g~~~~~ce~~~typrtydl~h~~~~~s~~~ 475 (555)
+|+|++||.|.++..|..... +|+-++.. ..+...-++ |+ +-+++.=.+.++.-+.+||+|.+. |..+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~- 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHL- 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCC-
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcC-
Confidence 899999999999999987643 66666654 444444333 33 112221122233223689999874 2222
Q ss_pred cCCCChhhhhhhhcccccCCceEEEecc-----------------hhHHHHHHHHHhhcCccc
Q 008748 476 ERGCSFEDLLIEMDRMLRPEGFVIIRDK-----------------SSIINYIRKFITALKWDG 521 (555)
Q Consensus 476 ~~~c~~~~~~~e~drilrp~g~~i~rd~-----------------~~~~~~~~~~~~~~~w~~ 521 (555)
..-....+|-++-|+|+|||.+++.+. .-..+++++++. .|++
T Consensus 106 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v 165 (202)
T 2kw5_A 106 -PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNW 165 (202)
T ss_dssp -CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCE
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceE
Confidence 112367899999999999999998731 123567777777 6665
No 371
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.05 E-value=7.7e-05 Score=70.09 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=70.2
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc-----cccchhcccccCCCCCCCccchhhcccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-----GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r-----gl~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
.+|+|++||.|.++..|.....- +|+-++-. ..+...-++ .+--+..|..+ ++.-+.+||+|-+.++|..+
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CCSCSSCEEEEEEESHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CCCCCCcccEEEECcchhhh
Confidence 47999999999999988754211 44444432 333333222 11112233332 23224689999998887643
Q ss_pred cc-----------CCCChhhhhhhhcccccCCceEEEecchhHHHHHHHHH--hhcCccce
Q 008748 475 EE-----------RGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFI--TALKWDGW 522 (555)
Q Consensus 475 ~~-----------~~c~~~~~~~e~drilrp~g~~i~rd~~~~~~~~~~~~--~~~~w~~~ 522 (555)
.. +.-....+|-|+-|+|+|||.+++.+-..- ...+.++ ....|+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~ 180 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLR 180 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEE
Confidence 20 012357899999999999999999875432 1123333 24467764
No 372
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.04 E-value=0.00024 Score=70.63 Aligned_cols=113 Identities=16% Similarity=0.234 Sum_probs=74.0
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hccc-cch-hcccccCCCCCCCccchhhcccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL-IGT-VHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl-~g~-~~~~ce~~~typrtydl~h~~~~~s 472 (555)
=..|+|++||.|.++..|..... +|+-++-. .-+...- ..|+ +-+ ..|..+ ++. +.+||+|.+..+|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccchh
Confidence 35799999999999999987632 56666643 4444322 2343 111 123332 233 78999999999887
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecc--------------hhHHHHHHHHHhhcCccc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDK--------------SSIINYIRKFITALKWDG 521 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~--------------~~~~~~~~~~~~~~~w~~ 521 (555)
.+.. -.+..+|-++-|+|+|||.+++-.. .-.-++++++... |++
T Consensus 196 ~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~ 254 (286)
T 3m70_A 196 FLNR--ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEF 254 (286)
T ss_dssp GSCG--GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEE
T ss_pred hCCH--HHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEE
Confidence 4422 2467899999999999999776321 1114566777666 876
No 373
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.04 E-value=0.00012 Score=72.61 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=63.1
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc---cchhcccccCCCC-CCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL---IGTVHDWCESFST-YPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl---~g~~~~~ce~~~t-yprtydl~h~~~~~ 471 (555)
.+|+|++||.|.++..|...+. -+|+-++-. ..+...-++ |+ +-+.+.=.+.++. -+.+||+|.+.+++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 5899999999999988875442 145555543 344433332 32 2222222222222 35799999998877
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.....+.-....+|-|+-|+|+|||.+++..
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5211111236789999999999999999875
No 374
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.03 E-value=0.00065 Score=67.00 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=73.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCC-CCchhHHhhc----cc-cchhc-ccccCCCCCCCccchhhccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GL-IGTVH-DWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~~~l~~i~~r----gl-~g~~~-~~ce~~~typrtydl~h~~~~~s~ 473 (555)
.+|+|++||.|.++.++..... +|+-++- +..+...-++ |+ +-+++ |+.+.++ +.+||+|.++.++..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAEL 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHHH
Confidence 5899999999999888765433 5555554 3444443332 33 22221 3333332 358999998765541
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCccc
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDG 521 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~ 521 (555)
+..++-++-|+|+|||.+++.+ ...-...+++.+....++.
T Consensus 197 -------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~ 238 (254)
T 2nxc_A 197 -------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRP 238 (254)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEE
T ss_pred -------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEE
Confidence 5788999999999999999864 2344778888888877876
No 375
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.01 E-value=0.0006 Score=61.27 Aligned_cols=134 Identities=13% Similarity=0.108 Sum_probs=71.9
Q ss_pred eeEeeccCCcchhhhhccCC-----CceEEEecccCCCCchhHHhhccccchhcccccCCC--------CCCCccchhhc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-----DVWVMNVAPVRMSARLKIIYDRGLIGTVHDWCESFS--------TYPRTYDLLHA 467 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-----~~wvmnv~p~~~~~~l~~i~~rgl~g~~~~~ce~~~--------typrtydl~h~ 467 (555)
.+|+|++||.|+++.+|... .+..+-+-| -+.+ . .+--+..|..+. + .-+.+||+|.+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-----~~~~--~-~~~~~~~d~~~~-~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-----MDPI--V-GVDFLQGDFRDE-LVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-----CCCC--T-TEEEEESCTTSH-HHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-----cccc--C-cEEEEEcccccc-hhhhhhhccCCCCceeEEEE
Confidence 48999999999999888643 223322222 1111 1 111112233221 1 11368999999
Q ss_pred cccccccccCCC-C------hhhhhhhhcccccCCceEEEecc-hhHHHHHHHHHhhcCccceecccccccccCCCCCce
Q 008748 468 WKVFSEIEERGC-S------FEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITALKWDGWLSEVEPRIDALSSSEER 539 (555)
Q Consensus 468 ~~~~s~~~~~~c-~------~~~~~~e~drilrp~g~~i~rd~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 539 (555)
+..+.......- . ...++-++-|+|+|||.+++... ..-...+.+.+.. .|+.. ....+.. ......|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~ 171 (180)
T 1ej0_A 95 DMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKV-KVRKPDS-SRARSREV 171 (180)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEE-EEECCTT-SCTTCCEE
T ss_pred CCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhE-EeecCCc-ccccCceE
Confidence 877652111000 0 15788999999999999998532 1223344444444 25541 2221111 12235688
Q ss_pred EEEEEec
Q 008748 540 VLIAKKK 546 (555)
Q Consensus 540 ~l~~~k~ 546 (555)
+++|++.
T Consensus 172 ~~~~~~~ 178 (180)
T 1ej0_A 172 YIVATGR 178 (180)
T ss_dssp EEEEEEE
T ss_pred EEEEccC
Confidence 8888763
No 376
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.99 E-value=0.0069 Score=60.18 Aligned_cols=92 Identities=18% Similarity=0.194 Sum_probs=53.6
Q ss_pred CCEEEEECCCCcHHHHHHhcC--------CCcccc--CChhhhhHHHHHHHHHcCCCe-EEEEe-CCCCCCCCCCCccEE
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--------DIIAMS--LAPNDVHENQIQFALERGIPS-TLGVL-GTKRLPYPSRSFELA 223 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--------~V~~vd--is~~dls~a~i~~A~~rg~~v-~~~~~-d~~~Lp~~d~sFDlV 223 (555)
..+|||+||+.|+++.+.++. .++++| +.|.+.. ..+.++ .|..+ |+..+. ...+|+|
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~--------~~Gv~~i~~~~G~Df~~~~--~~~~DvV 143 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ--------SYGWNIVTMKSGVDVFYKP--SEISDTL 143 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC--------STTGGGEEEECSCCGGGSC--CCCCSEE
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc--------CCCceEEEeeccCCccCCC--CCCCCEE
Confidence 468999999999999999875 123444 2222110 012222 34435 766543 4579999
Q ss_pred Eecccc---cccccchH--HHHHHHHhhcCCCc-EEEEEc
Q 008748 224 HCSRCR---IDWLQRDG--ILLLELDRLLRPGG-YFVYSS 257 (555)
Q Consensus 224 v~s~~~---l~~~~d~~--~~L~el~RvLkPGG-~lvis~ 257 (555)
+|-.+. ....+... .+|.-+.++|+||| .|++-.
T Consensus 144 LSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 144 LCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 984321 11111111 14555668999999 888754
No 377
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.99 E-value=0.0012 Score=60.72 Aligned_cols=129 Identities=15% Similarity=0.159 Sum_probs=82.9
Q ss_pred eEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhccccchhcccccCCCCCCCccchhhccccccccccC---
Q 008748 402 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEIEER--- 477 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~~~~--- 477 (555)
.|+|++||.|.++.+|...- +|+-++-. .-+.. ...+--+..|..+.+. +.+||+|-++..|......
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCccccc
Confidence 79999999999999998765 67777654 44433 2223223344444333 2799999988766521111
Q ss_pred --CCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcCccceecccccccccCCCCCceEEEEEe
Q 008748 478 --GCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLIAKK 545 (555)
Q Consensus 478 --~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~k 545 (555)
......++-++=|.| |||.+++-. ......+++++++...|+...... . ....|++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~--~----~~~~e~~~~~~~ 161 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKV--R----KILGETVYIIKG 161 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEE--E----ECSSSEEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEe--e----ccCCceEEEEEE
Confidence 112345666777777 999999865 445678899999999998742221 1 124577776653
No 378
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.98 E-value=0.00056 Score=70.76 Aligned_cols=111 Identities=13% Similarity=0.138 Sum_probs=67.0
Q ss_pred HHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCCCchhH----Hhhccc---cchhcccccCCCCC
Q 008748 386 DYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFSTY 458 (555)
Q Consensus 386 ~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~----i~~rgl---~g~~~~~ce~~~ty 458 (555)
.|.+.+...+....=..|||++||.|.++..+...+. -.|+-++....+.. +-+.|+ |-+.+.=.+.+ ..
T Consensus 37 ~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~ 113 (348)
T 2y1w_A 37 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-SL 113 (348)
T ss_dssp HHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CC
T ss_pred HHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhC-CC
Confidence 3544443333333345899999999999887765542 13444443323322 222354 22332222222 24
Q ss_pred CCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 459 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 459 prtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
|..||+|-+..++..+.. -.+...+.++-|+|+|||.+++.
T Consensus 114 ~~~~D~Ivs~~~~~~~~~--~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 PEQVDIIISEPMGYMLFN--ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp SSCEEEEEECCCBTTBTT--TSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCceeEEEEeCchhcCCh--HHHHHHHHHHHhhcCCCeEEEEe
Confidence 678999999887764432 24677888999999999999843
No 379
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.98 E-value=0.00019 Score=67.46 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=60.3
Q ss_pred eeEeeccCCcchhhhh-ccCCCceEEEecccCCC-CchhHHhhc----cc-cchhcccccCCCCCCCccchhhccccccc
Q 008748 401 RNVMDMNSNLGGFAAA-LKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-IGTVHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 401 rn~~dm~~~~g~faa~-l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-~g~~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
.+|+|++||.|.++++ +..... +|+-++.. .-+...-++ |. +-+.+.=.+.++.-+.+||+|.+.+++..
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 5899999999998543 333322 55555543 344433222 21 11222112233322479999999887764
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEec
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+. .-....++-|+-|+|+|||.+++.+
T Consensus 102 ~~--~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 102 MR--KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 31 1236789999999999999999875
No 380
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=96.97 E-value=0.00035 Score=71.67 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=60.6
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCCCchhH----Hhhccc---cchhcccccCCCCCC-Cccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFSTYP-RTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~----i~~rgl---~g~~~~~ce~~~typ-rtydl~h~~~~~s 472 (555)
.+|||++||.|.++..+...+. -.|+-++....+.. +-+.|+ |-+++.-.+.++ .| .+||+|.+..++.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMGY 116 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCBT
T ss_pred CEEEEecCccHHHHHHHHHCCC--CEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCchh
Confidence 4799999999999887765542 14444554333332 223455 223333333333 35 7899999876544
Q ss_pred ccccCCCChhhhhhhhcccccCCceEE
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVI 499 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i 499 (555)
.+. ..-.+..++-+++|+|+|||.++
T Consensus 117 ~l~-~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLL-YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBS-TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcc-cHHHHHHHHHHHHhhcCCCeEEE
Confidence 221 12346788999999999999998
No 381
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=96.96 E-value=0.00077 Score=70.54 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=70.1
Q ss_pred HHHHHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCCCchhH----Hhhccc---cchhcccccCC
Q 008748 383 RVVDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESF 455 (555)
Q Consensus 383 ~v~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~----i~~rgl---~g~~~~~ce~~ 455 (555)
+...|.+.+...+....=..|||++||.|.++..|.+... -.|+-++..+-+.. +-..|+ |-+++.=.+.+
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhc
Confidence 3344655553222333346899999999999887765432 14555554433332 334454 33444333443
Q ss_pred CCCCCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 456 STYPRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 456 ~typrtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
. +|.+||+|.+..+...+. ..-.+..++-+++|+|+|||.+|+.
T Consensus 125 ~-~~~~~D~Iv~~~~~~~l~-~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 125 S-LPEKVDVIISEWMGYFLL-RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp C-CSSCEEEEEECCCBTTBT-TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred C-cCCcceEEEEcChhhccc-chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 3 568999999865433221 1123677899999999999999854
No 382
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.94 E-value=0.00032 Score=70.00 Aligned_cols=93 Identities=12% Similarity=0.014 Sum_probs=57.4
Q ss_pred CEEEEECCCCcHHHHHHhc--CCCccccCChhhhhHHH--HHHHHHc----C---CCeEEEEeCCCC-CCCCCCCccEEE
Q 008748 157 RNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQ--IQFALER----G---IPSTLGVLGTKR-LPYPSRSFELAH 224 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~--~~V~~vdis~~dls~a~--i~~A~~r----g---~~v~~~~~d~~~-Lp~~d~sFDlVv 224 (555)
.+|||+|||+|..+..++. ..|+++|+++....... ++.+... + .++.+..+|... ++....+||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 5899999999999999885 37999999986432222 2222211 1 247888888654 342224699999
Q ss_pred ecccccccccchHHHHHHHHhhcCCCc
Q 008748 225 CSRCRIDWLQRDGILLLELDRLLRPGG 251 (555)
Q Consensus 225 ~s~~~l~~~~d~~~~L~el~RvLkPGG 251 (555)
+.- ..+.. ....++++..++|++.+
T Consensus 170 lDP-~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDP-MFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECC-CCCCC-CC-----HHHHHHHHHS
T ss_pred EcC-CCCCc-ccchHHHHHHHHHHHhh
Confidence 764 23332 22346677777887755
No 383
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.94 E-value=0.00054 Score=70.91 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=62.5
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCCCchhH----Hhhccc---cchhcccccCCCCCC-Cccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFSTYP-RTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~----i~~rgl---~g~~~~~ce~~~typ-rtydl~h~~~~~s 472 (555)
.+|||++||.|.++..|.+.+. -.|+-++....+.. +-..|+ |-+.+.=.+.+ .+| .+||+|.+..+..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA--RKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCC--CEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccccc
Confidence 5799999999999988876643 13444444333332 334565 33333333443 345 7999999876544
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEE
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
.+. ..-.+..++-+++|+|+|||.+|.
T Consensus 145 ~l~-~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLF-YESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBT-BTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccc-CchhHHHHHHHHHHhCCCCCEEcc
Confidence 221 123577899999999999999873
No 384
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.93 E-value=0.00048 Score=68.93 Aligned_cols=111 Identities=9% Similarity=0.092 Sum_probs=73.5
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccccc---hhcccccCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLIG---TVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~g---~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
..|+|++||.|+|+..|...-.= .|+-++.. ..+...-+ .|+-. .++.=++.+.. +.+||+|.++..++
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~~ 203 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVVR 203 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCSS
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCchh
Confidence 47999999999999887642110 35555543 34443222 25432 22222233333 67999998765433
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecch-------hHHHHHHHHHhhcCccce
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-------SIINYIRKFITALKWDGW 522 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~-------~~~~~~~~~~~~~~w~~~ 522 (555)
...++-++-|+|+|||.+++-+.. +.++++++.+....|++.
T Consensus 204 --------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 204 --------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp --------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred --------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeE
Confidence 367788899999999999996543 567889999999999874
No 385
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.93 E-value=0.0004 Score=70.21 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=64.8
Q ss_pred CcceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccccc---hh-cccccCCCCCCCccchhhcc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLIG---TV-HDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~g---~~-~~~ce~~~typrtydl~h~~ 468 (555)
..-.+|+|++||.|.++..|.+.. -..|+-++-. ..+...-+ .|+-+ .+ .|. +.++.=+.+||+|.+.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM-LDTPFDKGAVTASWNN 192 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hcCCCCCCCEeEEEEC
Confidence 445689999999999999887641 1245555543 44443333 34421 22 232 2333223799999998
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.+|..+ +...+|-|+-|+|||||.+++-+
T Consensus 193 ~~l~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 193 ESTMYV-----DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCGGGS-----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchhhC-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 888743 38999999999999999999764
No 386
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=96.92 E-value=0.00031 Score=72.95 Aligned_cols=101 Identities=13% Similarity=0.198 Sum_probs=65.4
Q ss_pred CcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhh----ccccc----hhcccccCCCCCCCccchhhcc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGLIG----TVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~----rgl~g----~~~~~ce~~~typrtydl~h~~ 468 (555)
...+.|+|++||.|.++.+|.+. |-. .|+-++-+..+...-+ .|+-+ +-+|.-+.-.++|.+||++.+.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEV--EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTC--EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC--EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 45689999999999999999642 322 3333333444443332 24322 2334433211367899999998
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+++..+... ....+|-++-|.|+|||.++|-|
T Consensus 256 ~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSEE--EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCHH--HHHHHHHHHHHhcCCCcEEEEEe
Confidence 888643321 24578899999999999999864
No 387
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.92 E-value=0.00034 Score=67.63 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=59.8
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc----c-----cchhcccccCCCCCCCccchhhcc-c
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG----L-----IGTVHDWCESFSTYPRTYDLLHAW-K 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg----l-----~g~~~~~ce~~~typrtydl~h~~-~ 469 (555)
..|+|++||.|.++..|..... -+|+-++.. ..|...-++. . .|-..+.-.+|. +.+||+|.++ .
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~fD~V~~d~~ 137 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP--DGHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC--TTCEEEEEECCC
T ss_pred CeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccC--CCceEEEEECCc
Confidence 5799999999999999976543 256666644 4554444332 1 122222222333 3799999873 2
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
.++.-..+.-..+.++-|+-|+|||||.+++-+-
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 1121111111233679999999999999998653
No 388
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=96.89 E-value=0.00044 Score=69.84 Aligned_cols=103 Identities=15% Similarity=0.085 Sum_probs=63.5
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc-----------c--cchhcccccCCC---CC---
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG-----------L--IGTVHDWCESFS---TY--- 458 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg-----------l--~g~~~~~ce~~~---ty--- 458 (555)
.-.+|+|++||.|+++..|...+.. +|+-+|-. ..+...-+|- . +-..+.=++.++ .+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 3458999999999999988765432 46666643 4444433331 1 111222223322 13
Q ss_pred CCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 459 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 459 prtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
+.+||+|-+...+.....+.-....+|-++-|+|+|||.+++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 358999998876642111111246889999999999999998743
No 389
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.87 E-value=0.00081 Score=68.43 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=65.9
Q ss_pred CCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhh----ccc----cchhcccccCCCCCCCccchhh
Q 008748 396 QKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGL----IGTVHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 396 ~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~----rgl----~g~~~~~ce~~~typrtydl~h 466 (555)
.... .+|+|++||.|.++.+|.+. |-. .|+-++-+..+...-+ .|+ --+-+|..+ .+|..||++.
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~ 238 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSA--RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNGDIYL 238 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTC--EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSCSEEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCC--EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCCCEEE
Confidence 4445 89999999999999998643 322 3333333444443322 232 223345554 3568899999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+.+++..+... ....+|-++-|.|+|||.++|-|
T Consensus 239 ~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 239 LSRIIGDLDEA--ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EESCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EchhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 99888644322 23589999999999999999875
No 390
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.86 E-value=0.00079 Score=65.23 Aligned_cols=96 Identities=18% Similarity=0.333 Sum_probs=60.7
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-cc-hhcccccCCCCCCCccchhhcc-cc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-IG-TVHDWCESFSTYPRTYDLLHAW-KV 470 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-~g-~~~~~ce~~~typrtydl~h~~-~~ 470 (555)
.-.+|+|++||.|.++..|..... +|+-++-. ..|...-++ |+ +- +-.|..+ ++ .+.+||+|.+. +.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFST 115 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCc
Confidence 346899999999999999876543 56666653 444443322 32 11 1223333 32 46789999754 22
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
+.... .-....+|-++-|+|+|||.+|+.
T Consensus 116 ~~~~~--~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 116 IMYFD--EEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC--HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 22111 113678899999999999999974
No 391
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.84 E-value=0.00085 Score=62.67 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=44.2
Q ss_pred Cccchhhcccccccccc----CC---CChhhhhhhhcccccCCceEEEecch-hHHHHHHHHHhhcCccceecccccccc
Q 008748 460 RTYDLLHAWKVFSEIEE----RG---CSFEDLLIEMDRMLRPEGFVIIRDKS-SIINYIRKFITALKWDGWLSEVEPRID 531 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~----~~---c~~~~~~~e~drilrp~g~~i~rd~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~ 531 (555)
.+||+|-++..+..... .. -....++-++-|+|+|||.+++.... +....+...+... |.. +....+..
T Consensus 105 ~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~-v~~~~~~~- 181 (201)
T 2plw_A 105 KKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQL-VHTTKPKA- 181 (201)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEE-EEECCCC--
T ss_pred CcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-Hhe-EEEECCcc-
Confidence 68999998775541100 00 00123788899999999999985211 2233444444442 432 12221111
Q ss_pred cCCCCCceEEEEEe
Q 008748 532 ALSSSEERVLIAKK 545 (555)
Q Consensus 532 ~~~~~~~~~l~~~k 545 (555)
......|..+||++
T Consensus 182 ~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 182 SRNESREIYLVCKN 195 (201)
T ss_dssp ----CCEEEEEEEE
T ss_pred cCCcCceEEEEEec
Confidence 11235788999986
No 392
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.83 E-value=0.00051 Score=66.93 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=60.9
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-----cchhcccccCCCCCCCccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-----IGTVHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-----~g~~~~~ce~~~typrtydl~h~~~~ 470 (555)
..|||++||.|.+|..|.+... -+|+-++.. ..+...-++ |+ .|-..+....|.. .+||.|..+.+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~FD~i~~D~~ 137 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEECCC
T ss_pred CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccc--cCCceEEEeee
Confidence 4699999999999999987642 245555543 455544332 22 1222233334432 58999976665
Q ss_pred ccccc-cCCCChhhhhhhhcccccCCceEEEec
Q 008748 471 FSEIE-ERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 471 ~s~~~-~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.+... .+.=....++=|+-|+|||||.+++-+
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 54221 111134578889999999999998753
No 393
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=96.78 E-value=0.0011 Score=67.64 Aligned_cols=121 Identities=14% Similarity=0.176 Sum_probs=77.2
Q ss_pred ccCCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhH----Hhhccccc----hhcccccCCCCCCCccch
Q 008748 394 VAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKI----IYDRGLIG----TVHDWCESFSTYPRTYDL 464 (555)
Q Consensus 394 ~~~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~----i~~rgl~g----~~~~~ce~~~typrtydl 464 (555)
.+......+|+|++||.|.++.+|.+. |-. .++-++-+..+.. +.+.|+-+ +-+|..++ .|-+||+
T Consensus 164 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D~ 238 (332)
T 3i53_A 164 KYDWAALGHVVDVGGGSGGLLSALLTAHEDL--SGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAGG 238 (332)
T ss_dssp SSCCGGGSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCSE
T ss_pred hCCCCCCCEEEEeCCChhHHHHHHHHHCCCC--eEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCcE
Confidence 345566889999999999999988642 321 1222233333332 22335422 23454444 4558999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCceEEEecch----------------------hHHHHHHHHHhhcCccc
Q 008748 465 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS----------------------SIINYIRKFITALKWDG 521 (555)
Q Consensus 465 ~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~----------------------~~~~~~~~~~~~~~w~~ 521 (555)
+.+.+++..+... ....+|-++=|.|+|||+++|-|.. ...++++++++.-.++.
T Consensus 239 v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 239 YVLSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred EEEehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 9999988743321 2468999999999999999987642 11455667777666665
No 394
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.76 E-value=0.00028 Score=67.57 Aligned_cols=135 Identities=11% Similarity=0.045 Sum_probs=76.5
Q ss_pred cceeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhh----ccccc----hhcccccCCCCCC-----Ccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYD----RGLIG----TVHDWCESFSTYP-----RTY 462 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~----rgl~g----~~~~~ce~~~typ-----rty 462 (555)
.-++|+|++||.|.++..|... +- -.|+-++.. ..+.++-+ .|+-. +..|..+.++..+ .+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPG--ARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC--CEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 3468999999999999888652 11 245555543 34443322 24422 2234444445555 689
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCceEEEecc-----hhHHHHHHHHHhhcCccceecccccccccCCCCC
Q 008748 463 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-----SSIINYIRKFITALKWDGWLSEVEPRIDALSSSE 537 (555)
Q Consensus 463 dl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~-----~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 537 (555)
|+|..++..... . ....++-++ |+|||||.+++.|- .++++.+++ .=++++.. +. ..-+.....
T Consensus 136 D~V~~d~~~~~~-~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~--~~-~~~~~~~~~ 204 (221)
T 3u81_A 136 DMVFLDHWKDRY-L---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTH--YS-SYLEYMKVV 204 (221)
T ss_dssp SEEEECSCGGGH-H---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEE--EE-EEETTTTEE
T ss_pred EEEEEcCCcccc-h---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEE--cc-cccccCCCC
Confidence 999887755521 1 133566677 99999999998764 334444443 23455421 10 000111234
Q ss_pred ceEEEEEec
Q 008748 538 ERVLIAKKK 546 (555)
Q Consensus 538 ~~~l~~~k~ 546 (555)
+.+.+++++
T Consensus 205 dG~~~~~~~ 213 (221)
T 3u81_A 205 DGLEKAIYQ 213 (221)
T ss_dssp EEEEEEEEC
T ss_pred CceEEEEEe
Confidence 678887764
No 395
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=96.75 E-value=0.00099 Score=68.57 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=63.3
Q ss_pred ccCCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchh--HHhhccccc----hhcccccCCCCCCCccchhh
Q 008748 394 VAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLK--IIYDRGLIG----TVHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 394 ~~~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~--~i~~rgl~g----~~~~~ce~~~typrtydl~h 466 (555)
.+.......|+|++||.|.++.+|.+. |-. .++-++-+..+. .+-+.|+-+ +-+|..+ ..| +||++.
T Consensus 179 ~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~---~~p-~~D~v~ 252 (348)
T 3lst_A 179 AGDFPATGTVADVGGGRGGFLLTVLREHPGL--QGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLR---EVP-HADVHV 252 (348)
T ss_dssp HSCCCSSEEEEEETCTTSHHHHHHHHHCTTE--EEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTT---CCC-CCSEEE
T ss_pred hCCccCCceEEEECCccCHHHHHHHHHCCCC--EEEEecCHHHhhcccccccCCCCCeEEEecCCCC---CCC-CCcEEE
Confidence 345567889999999999999988642 221 222222221111 001123321 2344443 456 999999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+.+++-.+... ....+|-|+-|+|||||.++|-|
T Consensus 253 ~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 99888643321 23589999999999999999865
No 396
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=96.74 E-value=0.00019 Score=75.97 Aligned_cols=128 Identities=10% Similarity=0.154 Sum_probs=76.5
Q ss_pred HHHHHHHhhhhccCCCcceeEeeccCC------cchhhhhccCC--CceEEEecccCCCCchhHHhhccccchhcccccC
Q 008748 383 RVVDYWKQMKTVAQKNTFRNVMDMNSN------LGGFAAALKDK--DVWVMNVAPVRMSARLKIIYDRGLIGTVHDWCES 454 (555)
Q Consensus 383 ~v~~y~~~~~~~~~~~~~rn~~dm~~~------~g~faa~l~~~--~~wvmnv~p~~~~~~l~~i~~rgl~g~~~~~ce~ 454 (555)
-...|.+.|.+... .-.+|||++|| .||.+..|... |- -.|+=++-..... .....+-=+..|- +.
T Consensus 202 y~~~Ye~lL~~l~~--~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~--a~V~GVDiSp~m~-~~~~rI~fv~GDa-~d 275 (419)
T 3sso_A 202 FTPHYDRHFRDYRN--QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR--GQIYGLDIMDKSH-VDELRIRTIQGDQ-ND 275 (419)
T ss_dssp CHHHHHHHHGGGTT--SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTT--CEEEEEESSCCGG-GCBTTEEEEECCT-TC
T ss_pred HHHHHHHHHHhhcC--CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHh-hcCCCcEEEEecc-cc
Confidence 34567666654322 34789999999 78877666532 21 1344444321111 0011111111121 11
Q ss_pred CCCC------CCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecc------------------hhHHHHH
Q 008748 455 FSTY------PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK------------------SSIINYI 510 (555)
Q Consensus 455 ~~ty------prtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~------------------~~~~~~~ 510 (555)
+++- ..+||+|.+++... .. .....|-|+=|+|||||.+|+.|- ..+++.+
T Consensus 276 lpf~~~l~~~d~sFDlVisdgsH~--~~---d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~l 350 (419)
T 3sso_A 276 AEFLDRIARRYGPFDIVIDDGSHI--NA---HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLL 350 (419)
T ss_dssp HHHHHHHHHHHCCEEEEEECSCCC--HH---HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHH
T ss_pred cchhhhhhcccCCccEEEECCccc--ch---hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHH
Confidence 1111 36899999876422 12 356789999999999999999643 4579999
Q ss_pred HHHHhhcCccc
Q 008748 511 RKFITALKWDG 521 (555)
Q Consensus 511 ~~~~~~~~w~~ 521 (555)
++++..++|+-
T Consensus 351 k~l~D~l~~~~ 361 (419)
T 3sso_A 351 KSLIDAIQHQE 361 (419)
T ss_dssp HHHHHHHTGGG
T ss_pred HHHHHHhcccc
Confidence 99999999885
No 397
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.72 E-value=0.0013 Score=60.14 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=52.0
Q ss_pred CEEEEECCCCc-HHHHHHhc-C--CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCCCCCC--CCccEEEeccccc
Q 008748 157 RNVLDVGCGVA-SFGAYLLS-H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS--RSFELAHCSRCRI 230 (555)
Q Consensus 157 ~~VLDIGCGtG-~~a~~La~-~--~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~Lp~~d--~sFDlVv~s~~~l 230 (555)
.+|||||||.| ..+..|++ . .|+++|+++..+. ++..|+.+ |..+ +.||+|++.+...
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirPP~ 100 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRPPA 100 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESCCT
T ss_pred CcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCCCH
Confidence 58999999999 69999986 4 5788888887664 56666544 3222 3799999776432
Q ss_pred ccccchHHHHHHHHhhcCCCcEEEEE
Q 008748 231 DWLQRDGILLLELDRLLRPGGYFVYS 256 (555)
Q Consensus 231 ~~~~d~~~~L~el~RvLkPGG~lvis 256 (555)
+....+.++.+.. |.-++|.
T Consensus 101 ----El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 101 ----EIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp ----TTHHHHHHHHHHH--TCEEEEE
T ss_pred ----HHHHHHHHHHHHc--CCCEEEE
Confidence 3344555555543 3445553
No 398
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=96.68 E-value=0.0009 Score=69.12 Aligned_cols=143 Identities=17% Similarity=0.147 Sum_probs=83.9
Q ss_pred CCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHh----hcccc----chhcccccCCCCCCCccchhh
Q 008748 396 QKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY----DRGLI----GTVHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 396 ~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~----~rgl~----g~~~~~ce~~~typrtydl~h 466 (555)
....-..|+|++||.|.++.+|.+. |-+ .++-++-+..+...- +.|+- =+-+|..+. .|..||++.
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 253 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHL--RGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKP---LPVTADVVL 253 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSCCEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCC--EEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCc---CCCCCCEEE
Confidence 3445679999999999999988643 221 222233233333222 23432 223454443 455699999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEecc--h--h-----------------------HHHHHHHHHhhcCc
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK--S--S-----------------------IINYIRKFITALKW 519 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~--~--~-----------------------~~~~~~~~~~~~~w 519 (555)
+.+++-.+... ....+|-++-|+|+|||.++|-|. . + ..+++++++..-.+
T Consensus 254 ~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 331 (374)
T 1qzz_A 254 LSFVLLNWSDE--DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGL 331 (374)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTE
T ss_pred EeccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 98888643221 124799999999999999998765 2 1 24566777777777
Q ss_pred cceecccccccccCCCCCceEEEEEecc
Q 008748 520 DGWLSEVEPRIDALSSSEERVLIAKKKL 547 (555)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~l~~~k~~ 547 (555)
+.. ...+. .+..-.....++.++|.=
T Consensus 332 ~~~-~~~~~-~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 332 ALA-SERTS-GSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEE-EEEEE-CCSSCSSCEEEEEEEECC
T ss_pred ceE-EEEEC-CCCcccCCcEEEEEEECc
Confidence 652 22111 110000112788888853
No 399
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.67 E-value=0.0011 Score=68.44 Aligned_cols=111 Identities=16% Similarity=0.089 Sum_probs=63.9
Q ss_pred HHHHHhhhhccCCCcceeEeeccCCcchhhhhccCCCceEEEecccCCCCchhH----Hhhccc---cchhcccccCCCC
Q 008748 385 VDYWKQMKTVAQKNTFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKI----IYDRGL---IGTVHDWCESFST 457 (555)
Q Consensus 385 ~~y~~~~~~~~~~~~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~----i~~rgl---~g~~~~~ce~~~t 457 (555)
..|.+.+...+....=..|||++||.|.++..|..... -.|+-++...-+.. +-+.|+ |-+++.=.+.+ .
T Consensus 50 ~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~ 126 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV-H 126 (340)
T ss_dssp HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-C
T ss_pred HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHh-c
Confidence 34544443322223335799999999999888765532 13444444322332 223344 22333223333 2
Q ss_pred CC-CccchhhccccccccccCCCChhhhhhhhcccccCCceEE
Q 008748 458 YP-RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVI 499 (555)
Q Consensus 458 yp-rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i 499 (555)
+| .+||+|-+..+...+. ..-.+..+|-++.|+|+|||.+|
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLL-FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCSCEEEEEECCCBTTBT-TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCcEEEEEEcCchhhcc-CHHHHHHHHHHHHhhcCCCcEEE
Confidence 45 7999999876422111 11235678999999999999998
No 400
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.65 E-value=0.0022 Score=62.75 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=77.6
Q ss_pred ceeEeeccCCcchhhhhccCC-C-ceEEEecccCC-CCchhHHhhc----cccc----hhcccccCCCCCCC--ccchhh
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKIIYDR----GLIG----TVHDWCESFSTYPR--TYDLLH 466 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~-~~~l~~i~~r----gl~g----~~~~~ce~~~typr--tydl~h 466 (555)
-++|+|++||.|+++.+|... | - -.|+-++- +..+..+-++ |+-. +..|..+.++..+. +||+|.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPAD--GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 468999999999999888754 1 1 23455554 2444443333 5421 22344443444444 899998
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEecchh------------HHHHHHHHHhh----cCccceeccccccc
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS------------IINYIRKFITA----LKWDGWLSEVEPRI 530 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~------------~~~~~~~~~~~----~~w~~~~~~~~~~~ 530 (555)
++.-.. ....++-++-|+|||||.+++.|..- ....++++... -+|++... .. -
T Consensus 142 ~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-~~-~- 211 (248)
T 3tfw_A 142 IDADKP-------NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATAL-QT-V- 211 (248)
T ss_dssp ECSCGG-------GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE-EE-C-
T ss_pred ECCchH-------HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEe-ec-C-
Confidence 765322 24567888899999999999865431 22344444443 35554211 00 0
Q ss_pred ccCCCCCceEEEEEec
Q 008748 531 DALSSSEERVLIAKKK 546 (555)
Q Consensus 531 ~~~~~~~~~~l~~~k~ 546 (555)
.....+.+.+++|+
T Consensus 212 --g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 212 --GTKGWDGFTLAWVN 225 (248)
T ss_dssp --STTCSEEEEEEEEC
T ss_pred --CCCCCCeeEEEEEe
Confidence 01235789999885
No 401
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.64 E-value=0.0003 Score=70.57 Aligned_cols=93 Identities=15% Similarity=0.272 Sum_probs=61.4
Q ss_pred eEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc-----cch-hcccccCCCCCCCccchhhcc-c
Q 008748 402 NVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL-----IGT-VHDWCESFSTYPRTYDLLHAW-K 469 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl-----~g~-~~~~ce~~~typrtydl~h~~-~ 469 (555)
.|+|++||.|.++..|.... .+|+-++-. ..+...-++ |+ +-+ -.|.. .++. +.+||+|.+. .
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCCC-SCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCCc-CCCcCEEEECCc
Confidence 79999999999999998763 256666643 445444333 21 222 23333 3443 7899988743 4
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
++..+. .-....+|-|+-|+|||||.+++.
T Consensus 160 ~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 160 SINELD--EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHTTSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 444211 112578999999999999999986
No 402
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.64 E-value=0.00097 Score=63.37 Aligned_cols=118 Identities=16% Similarity=0.219 Sum_probs=73.4
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhh----ccc--cchh-cccccCCCC-C-CCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYD----RGL--IGTV-HDWCESFST-Y-PRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~----rgl--~g~~-~~~ce~~~t-y-prtydl~h~~~ 469 (555)
..|+|++||.|.|+.+|... |- .+|+-++-. ..+...-+ .|+ +-++ .|..+ ++. + +.+||+|.++.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPD--INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEES
T ss_pred CeEEEEccCcCHHHHHHHHHCCC--CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEEC
Confidence 46999999999999888643 21 256666643 44444322 343 2122 23332 321 2 46899998763
Q ss_pred ccccc----ccCCCChhhhhhhhcccccCCceEEEe-cchhHHHHHHHHHhhcCccc
Q 008748 470 VFSEI----EERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITALKWDG 521 (555)
Q Consensus 470 ~~s~~----~~~~c~~~~~~~e~drilrp~g~~i~r-d~~~~~~~~~~~~~~~~w~~ 521 (555)
..... ..++=....+|-++-|+|+|||.+++. |..+....+.+++....|+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKL 176 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCee
Confidence 22100 011223467999999999999999997 45567778877777767765
No 403
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.59 E-value=0.00062 Score=64.90 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=58.8
Q ss_pred eeEeeccCCcchhhhhccCC-C-ceEEEecccCCC-CchhHHh----hccccc---hh-cccccCCCCCC-----Cccch
Q 008748 401 RNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRMS-ARLKIIY----DRGLIG---TV-HDWCESFSTYP-----RTYDL 464 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~~-~~l~~i~----~rgl~g---~~-~~~ce~~~typ-----rtydl 464 (555)
.+|+|++||.|.++..|... | - -.|+-++.. ..+...- +.|+-. ++ .|..+.++..+ .+||+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 48999999999999988764 1 2 234444432 3333322 224321 22 23333333333 68999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCceEEEecch
Q 008748 465 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 504 (555)
Q Consensus 465 ~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~ 504 (555)
|..++-.. ....++-++=|+|||||++++.|-.
T Consensus 144 v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDADKA-------NTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 98655322 2566788888999999999987543
No 404
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.59 E-value=0.011 Score=64.84 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=76.4
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCcHHHHHHhc-----------------CCCccccCChhhhhHHHHHHH
Q 008748 134 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQFA 196 (555)
Q Consensus 134 ~y~~~l~~ll~~~~~~l~~~~~~~~VLDIGCGtG~~a~~La~-----------------~~V~~vdis~~dls~a~i~~A 196 (555)
...+.+.+++.. ....+|+|-.||+|.|.....+ ..+.|.|+.+....-+..+..
T Consensus 204 ~Vv~lmv~l~~p--------~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 204 PVVRFMVEVMDP--------QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp HHHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc--------CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 455666666653 2335899999999999766542 247788888877766666655
Q ss_pred HHcCCCeEEEEeCCCCCCC----CCCCccEEEecccccc--c-----------c--cc-hHHHHHHHHhhcC-------C
Q 008748 197 LERGIPSTLGVLGTKRLPY----PSRSFELAHCSRCRID--W-----------L--QR-DGILLLELDRLLR-------P 249 (555)
Q Consensus 197 ~~rg~~v~~~~~d~~~Lp~----~d~sFDlVv~s~~~l~--~-----------~--~d-~~~~L~el~RvLk-------P 249 (555)
........+..+|....|+ ....||+|+++-- +. + . .+ .-.++..+.+.|| |
T Consensus 276 lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 276 LHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPP-FGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCC-SSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred hcCCccccccccccccCchhhhcccccceEEEecCC-CCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 5443345677777655543 2357999997531 11 0 0 01 1236777888886 7
Q ss_pred CcEEEEEcCCC
Q 008748 250 GGYFVYSSPEA 260 (555)
Q Consensus 250 GG~lvis~P~~ 260 (555)
||++.++.|..
T Consensus 355 gGr~avVlP~g 365 (530)
T 3ufb_A 355 GGRAAVVVPNG 365 (530)
T ss_dssp CCEEEEEEEHH
T ss_pred CceEEEEecch
Confidence 99999999863
No 405
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.54 E-value=0.0017 Score=62.15 Aligned_cols=116 Identities=13% Similarity=0.209 Sum_probs=71.5
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccc--cch-hcccccCCCC-C-CCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGL--IGT-VHDWCESFST-Y-PRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl--~g~-~~~~ce~~~t-y-prtydl~h~~~ 469 (555)
..|+|++||.|.|+.+|... |- .+|+-++-. .-+...- +.|+ +-+ ..|..+ ++. + +.+||.|+..
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~- 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN- 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE-
T ss_pred ceEEEEecCCCHHHHHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE-
Confidence 35999999999999988643 32 256666654 4444332 2354 112 223332 221 2 4688988653
Q ss_pred ccccc------ccCCCChhhhhhhhcccccCCceEEEe-cchhHHHHHHHHHhhcCccc
Q 008748 470 VFSEI------EERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITALKWDG 521 (555)
Q Consensus 470 ~~s~~------~~~~c~~~~~~~e~drilrp~g~~i~r-d~~~~~~~~~~~~~~~~w~~ 521 (555)
|+.- ..++-....+|-++-|+|+|||.+++. |..+..+.+.+.+....|+.
T Consensus 116 -~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 116 -FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp -SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred -CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 2211 122333468899999999999999987 56666777777766656653
No 406
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.50 E-value=0.0015 Score=62.26 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=58.8
Q ss_pred ceeEeeccCCcchhhhhccCC-C-ceEEEecccCCC-CchhHHh----hccccc---h-hcccccCCCCCC----Cccch
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRMS-ARLKIIY----DRGLIG---T-VHDWCESFSTYP----RTYDL 464 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~~-~~l~~i~----~rgl~g---~-~~~~ce~~~typ----rtydl 464 (555)
-.+|+|++||.|+++.+|... | - ..|+-++-. ..+..+- ..|+-. + ..|..+.++..+ .+||+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSG--GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSS--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 358999999999999988754 1 1 145555542 4444332 225422 1 123333222221 56999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 465 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 465 ~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
|..+...+ ....++-++-|+|||||.+++.|.
T Consensus 137 v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 98766433 245778889999999999998643
No 407
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.46 E-value=0.00076 Score=67.41 Aligned_cols=96 Identities=8% Similarity=0.000 Sum_probs=63.1
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcccc-chhcccccCC----CCCCCccchhhccccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRGLI-GTVHDWCESF----STYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rgl~-g~~~~~ce~~----~typrtydl~h~~~~~s~ 473 (555)
=..|+|++||.|.++..|.+.- -.|+-++.. .-|.+.-++--- .+-.+|.+.- ...+.+||+|-++.++..
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~ 122 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINR 122 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGG
T ss_pred cCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHh
Confidence 3579999999999999887653 246666644 455554433210 1223343211 122468999999988764
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEe
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
+.. -....++-+|-|+| |||.+++.
T Consensus 123 ~~~--~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 123 FTT--EEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp SCH--HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred CCH--HHHHHHHHHHHHhC-cCcEEEEE
Confidence 321 13667899999999 99999987
No 408
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.46 E-value=0.0043 Score=60.49 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=64.2
Q ss_pred eeEeeccCCcchhhhhccCC-----CceEEEecccCCC-CchhHHhhccc----cchhcccccC--CCCCCC-ccchhhc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-----DVWVMNVAPVRMS-ARLKIIYDRGL----IGTVHDWCES--FSTYPR-TYDLLHA 467 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-----~~wvmnv~p~~~~-~~l~~i~~rgl----~g~~~~~ce~--~~typr-tydl~h~ 467 (555)
.+|+|++||.|+.++.|.+. |- -.|+-++-. .-+.+. |++ -=+..|..+. ++..+. +||+|+.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~--~~V~gvD~s~~~l~~a--~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGID--CQVIGIDRDLSRCQIP--ASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCC--CEEEEEESCCTTCCCC--GGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCC--CEEEEEeCChHHHHHH--hccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 48999999999999988542 21 123333322 111111 122 1122233332 222222 6999986
Q ss_pred cccccccccCCCChhhhhhhhcc-cccCCceEEEecchh-----HHHHHHHHHhhc--Cccc
Q 008748 468 WKVFSEIEERGCSFEDLLIEMDR-MLRPEGFVIIRDKSS-----IINYIRKFITAL--KWDG 521 (555)
Q Consensus 468 ~~~~s~~~~~~c~~~~~~~e~dr-ilrp~g~~i~rd~~~-----~~~~~~~~~~~~--~w~~ 521 (555)
+.. + -....+|-|+-| +|+|||.+++.|... --..+.++++.. +++.
T Consensus 159 d~~------~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 159 DNA------H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp ESS------C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred CCc------h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 553 1 257789999998 999999999976311 123567777766 5655
No 409
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.43 E-value=0.0028 Score=61.90 Aligned_cols=114 Identities=15% Similarity=0.187 Sum_probs=66.8
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhh----------ccc--cchh-cccccCCC--CCCCcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYD----------RGL--IGTV-HDWCESFS--TYPRTY 462 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~----------rgl--~g~~-~~~ce~~~--typrty 462 (555)
=..|+|++||.|.|+.+|... |-+ ||+=++-. .-|...-+ .|+ |-++ .|.-+.++ .-+.+|
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~--~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDT--LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTS--EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 356999999999999998753 322 45555543 33322211 232 1111 22222122 124689
Q ss_pred chhhcccccccc------ccCCCChhhhhhhhcccccCCceEEEe-cchhHHHHHHHHHhhc
Q 008748 463 DLLHAWKVFSEI------EERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITAL 517 (555)
Q Consensus 463 dl~h~~~~~s~~------~~~~c~~~~~~~e~drilrp~g~~i~r-d~~~~~~~~~~~~~~~ 517 (555)
|+|... |..- .++|.....+|-|+-|+|+|||.+++. |.....+.+.+.+..-
T Consensus 125 D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 125 TKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEH 184 (235)
T ss_dssp EEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred eEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 988642 3211 133444568999999999999999985 7777777777766654
No 410
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.43 E-value=0.00056 Score=66.10 Aligned_cols=97 Identities=14% Similarity=0.024 Sum_probs=60.9
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhcc----ccchhcccccCC--CCCC--Cccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDRG----LIGTVHDWCESF--STYP--RTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~rg----l~g~~~~~ce~~--~typ--rtydl~h~~~~~ 471 (555)
..|+|++||.|.++..|...-. +|+-++-. ..+...-++- +--+..|..+.- ..++ ..||+|.+..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 4699999999999998865322 56666543 4444443332 111112222210 0111 238999999888
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
..+.. -....+|-|+-|+|+|||.++|-|
T Consensus 135 ~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 135 HHIPV--EKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp TTSCG--GGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hcCCH--HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 74321 246789999999999999988765
No 411
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.42 E-value=0.0008 Score=63.67 Aligned_cols=92 Identities=18% Similarity=0.094 Sum_probs=57.6
Q ss_pred eeEeeccCCcchhhhhccCC-C-ceEEEecccCCC-CchhHH----hhccccc---hh-cccccCCCCCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRMS-ARLKII----YDRGLIG---TV-HDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~~-~~l~~i----~~rgl~g---~~-~~~ce~~~typrtydl~h~~~ 469 (555)
++|+|++||.|.++.+|... + - -.|+-++-. ..+.+. -..|+-. ++ .|..+.++..+. ||+|..+.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISIS--SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 58999999999999888653 1 1 134444432 333322 2234421 22 234343344456 99997653
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
- .-....++-++-|+|+|||.+++.|
T Consensus 135 ~-------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D-------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T-------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C-------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1 2346788889999999999999965
No 412
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.42 E-value=0.00068 Score=69.55 Aligned_cols=104 Identities=12% Similarity=0.128 Sum_probs=67.0
Q ss_pred cCCCc-ceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHh----hccccc----hhcccccCCCCCCCccch
Q 008748 395 AQKNT-FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY----DRGLIG----TVHDWCESFSTYPRTYDL 464 (555)
Q Consensus 395 ~~~~~-~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~----~rgl~g----~~~~~ce~~~typrtydl 464 (555)
+.... ...|+|++||.|.++.+|.+. |-. .++-++-+..+...- +.|+-+ +-+|..+.-...|..||+
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~ 251 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQL--TGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADV 251 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTC--EEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCC--eEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccE
Confidence 44445 789999999999999988643 321 222233333443322 234422 334443332125778999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 465 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 465 ~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+.+.++|..+... ....+|-++-|.|+|||.++|-|
T Consensus 252 v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 252 VMLNDCLHYFDAR--EAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEecccccCCHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999988744321 24689999999999999999865
No 413
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=96.42 E-value=0.0017 Score=67.42 Aligned_cols=139 Identities=12% Similarity=0.152 Sum_probs=85.7
Q ss_pred ccCCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhH----Hhhcccc----chhcccccCCCCCCCccch
Q 008748 394 VAQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKI----IYDRGLI----GTVHDWCESFSTYPRTYDL 464 (555)
Q Consensus 394 ~~~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~----i~~rgl~----g~~~~~ce~~~typrtydl 464 (555)
.+......+|+|++||.|.++.+|.+. |-. .++-++-+..+.. +-+.|+- =+-+|..++ +|..||+
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p~~~D~ 271 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGL--RGTLLERPPVAEEARELLTGRGLADRCEILPGDFFET---IPDGADV 271 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CCSSCSE
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCC--eEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCC---CCCCceE
Confidence 345567799999999999999998653 211 2222232333332 2233442 223455444 4558999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCceEEEecch------------------------hHHHHHHHHHhhcCcc
Q 008748 465 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------------------SIINYIRKFITALKWD 520 (555)
Q Consensus 465 ~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~------------------------~~~~~~~~~~~~~~w~ 520 (555)
+-+.+++..+... ....+|-++=|.|+|||.++|-|.. ...++++++++.-.++
T Consensus 272 v~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 272 YLIKHVLHDWDDD--DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred EEhhhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 9998888643221 1236899999999999999986421 1145677778877777
Q ss_pred ceecccccccccCCCCCceEEEEEe
Q 008748 521 GWLSEVEPRIDALSSSEERVLIAKK 545 (555)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~l~~~k 545 (555)
.. .... .......|+.|+|
T Consensus 350 ~~-~~~~-----~~~~~~svie~~~ 368 (369)
T 3gwz_A 350 VE-RSLP-----CGAGPVRIVEIRR 368 (369)
T ss_dssp EE-EEEE-----CSSSSEEEEEEEE
T ss_pred EE-EEEE-----CCCCCcEEEEEEe
Confidence 62 2211 1123467888876
No 414
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=96.41 E-value=0.00099 Score=65.74 Aligned_cols=62 Identities=10% Similarity=0.069 Sum_probs=44.5
Q ss_pred CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecchh----------------HHHHHHHHHhhcCccc
Q 008748 460 RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS----------------IINYIRKFITALKWDG 521 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~----------------~~~~~~~~~~~~~w~~ 521 (555)
.+||+|-++.+|..+..+.=++..+|-+|-|+|||||.+|+.+... ..+++.+++..-..++
T Consensus 155 ~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 155 PLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 4899999998887432221235678999999999999999985211 3567777777666654
No 415
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.40 E-value=0.00053 Score=69.97 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=52.7
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHh-h-ccc--cchhcccccCCCCCCCccchhhccccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY-D-RGL--IGTVHDWCESFSTYPRTYDLLHAWKVFSEIE 475 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~-~-rgl--~g~~~~~ce~~~typrtydl~h~~~~~s~~~ 475 (555)
..|+|++||.|+|+..|.+. .|.-+-+....++..+..+- + .|. +-+... .+.+..-+.+||+|.++..|+ ..
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~-~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGES-SP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCC-CS
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccc-cC
Confidence 58999999999999888775 23222221011111111000 0 011 111111 012221246899999987664 11
Q ss_pred cC---CCChhhhhhhhcccccCCceEEEe
Q 008748 476 ER---GCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 476 ~~---~c~~~~~~~e~drilrp~g~~i~r 501 (555)
.. .-....+|-++-|+|+|||.+++.
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 00 000114788899999999999985
No 416
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=96.40 E-value=0.0038 Score=63.21 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=63.9
Q ss_pred CcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhh----ccccc----hhcccccCCCCCCCccchhhcc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGLIG----TVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~----rgl~g----~~~~~ce~~~typrtydl~h~~ 468 (555)
..-.+|+|++||.|.++.+|.+. |-. .|+-++-+..+...-+ .|+-+ +-+|..+. ..|..||++.+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~ 239 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA--EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLLP 239 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC--eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEEc
Confidence 45578999999999999998753 322 3444443333332222 24322 22344332 356679999998
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+++..+... ....+|-++-|+|+|||+++|-|
T Consensus 240 ~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 240 NFLHHFDVA--TCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp SCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhccCCHH--HHHHHHHHHHHhCCCCcEEEEEe
Confidence 888744211 24689999999999999988764
No 417
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=96.37 E-value=0.00052 Score=68.97 Aligned_cols=44 Identities=16% Similarity=0.324 Sum_probs=34.0
Q ss_pred CCCccchhhccccccccc--cCCCChhhhhhhhcccccCCceEEEe
Q 008748 458 YPRTYDLLHAWKVFSEIE--ERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 458 yprtydl~h~~~~~s~~~--~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
.+.+||+|.+.+++..+. .....+..++-++-|+|||||.+|+.
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 457999999988874221 01234778999999999999999996
No 418
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.37 E-value=0.00029 Score=64.68 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=61.1
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hcccc----chhcccccCCCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGLI----GTVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl~----g~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++.+|...+. -+|+-++-. ..+...- ..|+- =+..|+.+.++..+.+||+|.++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 4799999999999988876643 245556543 3333322 23332 12234444334445679999988776
Q ss_pred cccccCCCChhhhhhhhc--ccccCCceEEEecch
Q 008748 472 SEIEERGCSFEDLLIEMD--RMLRPEGFVIIRDKS 504 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~d--rilrp~g~~i~rd~~ 504 (555)
.. .....++-++- |+|+|||.+++....
T Consensus 111 ~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 111 AK-----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HH-----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred Cc-----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 41 12345555555 999999999987543
No 419
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.35 E-value=0.00055 Score=63.72 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=60.9
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hccc--cchh-cccccCCCCC-CCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL--IGTV-HDWCESFSTY-PRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl--~g~~-~~~ce~~~ty-prtydl~h~~~~~ 471 (555)
.+|+|++||.|.++.++...+.- .|+-++.. ..+...- ..|+ +-++ .|..+....+ +.+||+|-++..|
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 47999999999999866554422 34555543 3343322 2243 1122 2222221112 4789999988776
Q ss_pred cccccCCCChhhhhhhhcc--cccCCceEEEecc
Q 008748 472 SEIEERGCSFEDLLIEMDR--MLRPEGFVIIRDK 503 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~dr--ilrp~g~~i~rd~ 503 (555)
..... .+..++-++-| +|+|||.+++...
T Consensus 124 ~~~~~---~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 124 NVDSA---DVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp TSCHH---HHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred Ccchh---hHHHHHHHHHhcCccCCCeEEEEEec
Confidence 63211 36788899988 9999999999754
No 420
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.35 E-value=0.00075 Score=64.04 Aligned_cols=115 Identities=10% Similarity=0.189 Sum_probs=71.8
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc-cc--------------cchhcccccCCCCCC----C
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-GL--------------IGTVHDWCESFSTYP----R 460 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r-gl--------------~g~~~~~ce~~~typ----r 460 (555)
..|+|++||.|.++..|.+.. ..|+-+|-+ .-|...-+| ++ ..-..=.|..+...| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 479999999999999997653 257777644 555555444 11 011111233333333 6
Q ss_pred ccchhhccccccccccCCCChhhhhhhhcccccCCce--EEEecch----------hHHHHHHHHHhhcCccc
Q 008748 461 TYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGF--VIIRDKS----------SIINYIRKFITALKWDG 521 (555)
Q Consensus 461 tydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~--~i~rd~~----------~~~~~~~~~~~~~~w~~ 521 (555)
+||+|-+.+.|..+.. -....++-||-|+|||||. ++.-+.. -..++++.++.. .|++
T Consensus 101 ~fD~v~~~~~l~~l~~--~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i 170 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPA--DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEV 170 (203)
T ss_dssp SEEEEEEESCGGGSCH--HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEE
T ss_pred CEEEEEECcchhhCCH--HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEE
Confidence 8999988777764321 1244678999999999998 3332211 125777887776 6765
No 421
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.35 E-value=0.0031 Score=61.68 Aligned_cols=97 Identities=9% Similarity=0.094 Sum_probs=56.1
Q ss_pred ceeEeeccCCcchhhhhccCC-----CceEEEecccCCCCchhHHhhcccc---chh-cccccCCCCC-----CCccchh
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-----DVWVMNVAPVRMSARLKIIYDRGLI---GTV-HDWCESFSTY-----PRTYDLL 465 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-----~~wvmnv~p~~~~~~l~~i~~rgl~---g~~-~~~ce~~~ty-----prtydl~ 465 (555)
-++|+|++||.|.++.+|... .|..+-+-|......-..+-..|+- -++ .|..+.++.. +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 468999999999998887642 2232222222111111223333542 122 2322333333 4789999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 466 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 466 h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
..+.-.. ....++-++-|+|||||.+++.|.
T Consensus 141 ~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 141 FIDADKT-------NYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEESCGG-------GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEcCChH-------HhHHHHHHHHHhcCCCeEEEEECC
Confidence 8765422 245577788899999999998643
No 422
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=96.25 E-value=0.00079 Score=64.43 Aligned_cols=90 Identities=14% Similarity=0.237 Sum_probs=58.0
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc-----cccchhcccccCCCCCCCccchhhccccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-----GLIGTVHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r-----gl~g~~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
-.+|+|++||.|.++..|...- -+|+-++-. ..+...-++ .+--+..|..+.++ -+.+||+|.+++.+..
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHH
Confidence 3489999999999999887643 245555543 444444333 12122234444222 2368999998887763
Q ss_pred cccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 474 IEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 474 ~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
+ .-++-|+|+|||.+++-..
T Consensus 147 ~----------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 147 L----------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp C----------CHHHHHTEEEEEEEEEEEC
T ss_pred H----------HHHHHHHcCCCcEEEEEEc
Confidence 2 2378899999999998754
No 423
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.25 E-value=0.061 Score=54.41 Aligned_cols=98 Identities=16% Similarity=0.214 Sum_probs=60.4
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcCCC-eEEEEe-CCCCCCCCCCCccEEEeccccc
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIP-STLGVL-GTKRLPYPSRSFELAHCSRCRI 230 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg~~-v~~~~~-d~~~Lp~~d~sFDlVv~s~~~l 230 (555)
.+|||+||++|.|+.+.+.. .|.++|+-.....+.+. ..+.+-+ +.+... |+..++. ..+|+|+|--.
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~--~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-- 169 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQL--VQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-- 169 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCC--CCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC--
T ss_pred CEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcch--hhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc--
Confidence 48999999999999987753 57788887653311100 0011111 455555 6666654 56999998432
Q ss_pred ccccch----HH---HHHHHHhhcCCC-cEEEEEcCCC
Q 008748 231 DWLQRD----GI---LLLELDRLLRPG-GYFVYSSPEA 260 (555)
Q Consensus 231 ~~~~d~----~~---~L~el~RvLkPG-G~lvis~P~~ 260 (555)
+-.+++ .. +|.-+.+.|++| |-|++-+-..
T Consensus 170 eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 170 ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 222222 11 566667889999 8998866443
No 424
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.24 E-value=0.0017 Score=65.91 Aligned_cols=99 Identities=8% Similarity=0.058 Sum_probs=59.9
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----ccc------c-hh-cccc------cCCC-CC-C
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLI------G-TV-HDWC------ESFS-TY-P 459 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl~------g-~~-~~~c------e~~~-ty-p 459 (555)
..|+|++||.|+.+..+.....+ +|+=+|-+ .-|.+.-+| |+- . .| ...+ +.+. .+ +
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 57999999999977766544433 46666654 555554433 220 0 01 1112 2211 12 4
Q ss_pred CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 460 RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.+||+|-+...+-..... -....+|-||-|+|||||.+|+..
T Consensus 128 ~~FD~V~~~~~lhy~~~~-~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHP-RHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp SCEEEEEEESCGGGTCST-TTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCH-HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 799999766544211111 135789999999999999999864
No 425
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.23 E-value=0.001 Score=66.13 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=58.4
Q ss_pred eEeeccCCcchhhhhccCC---CceEEEecccCCC-CchhHHh----hccccchhcccccCCCCCC-Cccchhhcccccc
Q 008748 402 NVMDMNSNLGGFAAALKDK---DVWVMNVAPVRMS-ARLKIIY----DRGLIGTVHDWCESFSTYP-RTYDLLHAWKVFS 472 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~---~~wvmnv~p~~~~-~~l~~i~----~rgl~g~~~~~ce~~~typ-rtydl~h~~~~~s 472 (555)
+|+|++||.|.++.+|... +-+ +|+=++-. .-|...- +.|+..-..=.|.-+..+| ..||++-+..++.
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~--~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNC--KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSC--EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCC--EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 6999999999998877532 222 34555533 3444322 2344222211222222222 3699998776665
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
.+.. -....+|-||-|+|||||.+|+.|.
T Consensus 151 ~~~~--~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 151 FLEP--SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecCc--hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 3211 1234689999999999999999753
No 426
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.23 E-value=0.0019 Score=63.93 Aligned_cols=115 Identities=14% Similarity=0.128 Sum_probs=72.4
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc-cc-------------------cchhcccccCCCCCC
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-GL-------------------IGTVHDWCESFSTYP 459 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r-gl-------------------~g~~~~~ce~~~typ 459 (555)
..|+|++||.|.++..|.+.- + +|+-++-+ .-+....++ ++ -+-..=.|..+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G-~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRG-H--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTT-C--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCC-C--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 469999999999999998763 2 57777754 444444332 11 011111222232322
Q ss_pred ----CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEec---------c---hhHHHHHHHHHhhcCccc
Q 008748 460 ----RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD---------K---SSIINYIRKFITALKWDG 521 (555)
Q Consensus 460 ----rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd---------~---~~~~~~~~~~~~~~~w~~ 521 (555)
.+||+|-+.++|..+. ......++-||-|+|||||.+++-. . .-..++++.++.. .|++
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~--~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v 221 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAIN--PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSM 221 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSC--GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEE
T ss_pred cccCCCEEEEEEhhhhhhCC--HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEE
Confidence 6899999888776442 1235678999999999999986321 0 0125777888776 4776
No 427
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.23 E-value=0.006 Score=59.72 Aligned_cols=99 Identities=11% Similarity=0.110 Sum_probs=56.9
Q ss_pred ceeEeeccCCcchhhhhccCC--C-ceEEEecccCC----CCchhHHhh----ccc---cchh-cc-cc-cCCCCCCCcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK--D-VWVMNVAPVRM----SARLKIIYD----RGL---IGTV-HD-WC-ESFSTYPRTY 462 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~--~-~wvmnv~p~~~----~~~l~~i~~----rgl---~g~~-~~-~c-e~~~typrty 462 (555)
=.+|+|++||.|.++..|.+. | .=|.-|=+... +..+...-+ .|+ +-+. .| .. +..+.-+.+|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 358999999999999888753 2 33333322221 125554322 233 1111 12 21 1222224799
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 463 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 463 dl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
|+|++.+++..... ...++-.+.++++|||.+++.+
T Consensus 124 D~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 124 DRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp SEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEE
Confidence 99999998874432 3444555566666799999953
No 428
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.22 E-value=0.0023 Score=62.35 Aligned_cols=114 Identities=14% Similarity=0.217 Sum_probs=65.4
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc------------cccch---hcccccCCCC-C-CCc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------------GLIGT---VHDWCESFST-Y-PRT 461 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r------------gl~g~---~~~~ce~~~t-y-prt 461 (555)
..|+|++||.|+|+.+|... |- .+|+-++.. .-+..+-++ |+-.+ -.|..+.++. + +.+
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE--DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT--SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC--CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 57999999999999888642 21 256666643 333333221 44221 1222222221 1 346
Q ss_pred cchhhccccccccc------cCCCChhhhhhhhcccccCCceEEE-ecchhHHHHHHHHHhhcC
Q 008748 462 YDLLHAWKVFSEIE------ERGCSFEDLLIEMDRMLRPEGFVII-RDKSSIINYIRKFITALK 518 (555)
Q Consensus 462 ydl~h~~~~~s~~~------~~~c~~~~~~~e~drilrp~g~~i~-rd~~~~~~~~~~~~~~~~ 518 (555)
+|.|.. +|+... .++--...++-++-|+|+|||.+++ -|..+..+.+.+.+..-.
T Consensus 129 ~d~v~~--~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~ 190 (246)
T 2vdv_E 129 LSKMFF--CFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHP 190 (246)
T ss_dssp EEEEEE--ESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHST
T ss_pred cCEEEE--ECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCc
Confidence 776652 122111 1122235899999999999999998 477766777776665543
No 429
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.22 E-value=0.006 Score=63.67 Aligned_cols=105 Identities=17% Similarity=0.122 Sum_probs=68.3
Q ss_pred CCCEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC-------CCeEEEEeCCCCCC-CCCCCccE
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-------IPSTLGVLGTKRLP-YPSRSFEL 222 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg-------~~v~~~~~d~~~Lp-~~d~sFDl 222 (555)
.+.+|||+.||.|+=+.+|++. .|+++|++..-+.... +.....+ .++.+...|...++ ...+.||.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~-~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQ-KILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHH-HHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHH-HHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 3468999999999988888763 5778888775443332 2222222 35677777776654 34578999
Q ss_pred EEe----ccc---ccc------cccc----------hHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 223 AHC----SRC---RID------WLQR----------DGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 223 Vv~----s~~---~l~------~~~d----------~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
|++ +.. .+. +... ...+|....+.|||||+++.++-..
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 995 321 111 1101 1247888999999999999988654
No 430
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.19 E-value=0.0045 Score=58.37 Aligned_cols=137 Identities=13% Similarity=0.068 Sum_probs=68.9
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCCCchhHHhhccccchhcccccCCCC-------CC----Cccchhhcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLKIIYDRGLIGTVHDWCESFST-------YP----RTYDLLHAW 468 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~~i~~rgl~g~~~~~ce~~~t-------yp----rtydl~h~~ 468 (555)
-.+|+|++||.|+|+..|.+... .|+-++-....+ ..|+-=+-.|..+. .+ .+ .+||+|-++
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~~---~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEMEE---IAGVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCCC---CTTCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCEEEEEeecCCHHHHHHHHcCC---cEEEEecccccc---CCCeEEEEccccCH-HHHHHHHHHhhcccCCcceEEecC
Confidence 36899999999999999987632 233232211000 01222222333221 10 11 378998876
Q ss_pred ccccccc-------cCCCChhhhhhhhcccccCCceEEEecc-hhHHHHHHHHHhhcCccceecccccccccCCCCCceE
Q 008748 469 KVFSEIE-------ERGCSFEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERV 540 (555)
Q Consensus 469 ~~~s~~~-------~~~c~~~~~~~e~drilrp~g~~i~rd~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 540 (555)
.-..... ...-..+.++-++-|+|||||.+++.-. ..-...+...++.. ++. +....+... -+.+.|..
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~-v~~~kP~as-R~~s~E~y 175 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSS-YKISKPPAS-RGSSSEIY 175 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEE-EEEECC-------CCEEE
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCE-EEEECCCCc-cCCCceEE
Confidence 5322000 0000124677888999999999997531 11133444444432 432 223222221 22468999
Q ss_pred EEEEec
Q 008748 541 LIAKKK 546 (555)
Q Consensus 541 l~~~k~ 546 (555)
+||++.
T Consensus 176 ~v~~~~ 181 (191)
T 3dou_A 176 IMFFGF 181 (191)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 999763
No 431
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.19 E-value=0.0024 Score=67.05 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=62.8
Q ss_pred CCCEEEEECCCCcHHHHHHhcC---CCccccCChhhhhHHHHHHHHHc-------------CCCeEEEEeCCCCC----C
Q 008748 155 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER-------------GIPSTLGVLGTKRL----P 214 (555)
Q Consensus 155 ~~~~VLDIGCGtG~~a~~La~~---~V~~vdis~~dls~a~i~~A~~r-------------g~~v~~~~~d~~~L----p 214 (555)
++++||=||.|.|..++.+++. .|+.+|+++.-+ +.+++. ..++.+...|.... .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VV-----e~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVI-----DGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHH-----HHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHH-----HHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh
Confidence 3579999999999999999874 466666666544 444432 12357777775322 1
Q ss_pred CCCCCccEEEecccccccccc---------hHHHHHHHHhhcCCCcEEEEEc
Q 008748 215 YPSRSFELAHCSRCRIDWLQR---------DGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 215 ~~d~sFDlVv~s~~~l~~~~d---------~~~~L~el~RvLkPGG~lvis~ 257 (555)
-..+.||+|+.-..--....+ ...+++.+.++|+|||.++.-.
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 234679999953100000011 1457889999999999998743
No 432
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.16 E-value=0.0014 Score=66.81 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=58.4
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccccchhcccccCCCCC-CCccchhhcccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGLIGTVHDWCESFSTY-PRTYDLLHAWKVFS 472 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl~g~~~~~ce~~~ty-prtydl~h~~~~~s 472 (555)
=..|+|++||.|+++|.+..+ +- -.|+-++-. ..+...- +.|+ .-..--|.....+ ..+||+|....+-
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~- 198 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYG--MRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA- 198 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC-
T ss_pred cCEEEEECCCccHHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc-
Confidence 358999999999998665321 21 245555543 4444332 2365 2111112211222 4799999765431
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
-+...++-|+-|+|||||.+++++.
T Consensus 199 ------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 199 ------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2467899999999999999999974
No 433
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.14 E-value=0.0011 Score=63.52 Aligned_cols=93 Identities=22% Similarity=0.269 Sum_probs=53.2
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-Cc----hhHHhhc-cccchhcccccC--CCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-AR----LKIIYDR-GLIGTVHDWCES--FSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~----l~~i~~r-gl~g~~~~~ce~--~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++..|.+. +- -.|+-++-. .- +...-.+ ++.-+..|-.+. +...+.+||+|-++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~--~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~-- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDE--GIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI-- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTT--SEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC--
T ss_pred CEEEEECCcCCHHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec--
Confidence 37999999999998876542 10 134444433 11 1111112 222223344332 123457999998762
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
. .. =....++-|+-|+|||||.+++-
T Consensus 135 ~---~~-~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 A---QK-NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp C---ST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---Ch-hHHHHHHHHHHHHhCCCCEEEEE
Confidence 2 11 11334588999999999999985
No 434
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.13 E-value=0.00092 Score=62.99 Aligned_cols=90 Identities=17% Similarity=0.124 Sum_probs=57.1
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----ccc--ch-hcccccCCCCCCCccchhhcccc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GLI--GT-VHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl~--g~-~~~~ce~~~typrtydl~h~~~~ 470 (555)
.-.+|+|++||.|.+++.|.... -+|+-++-. ..+...-++ |+- -+ ..|..+.+. -..+||+|.++..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAA 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSB
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccc
Confidence 34579999999999999887652 345555543 444433332 431 12 223333222 2468999999877
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+..+. =++-|+|+|||.+++--
T Consensus 153 ~~~~~----------~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 153 PPEIP----------TALMTQLDEGGILVLPV 174 (210)
T ss_dssp CSSCC----------THHHHTEEEEEEEEEEE
T ss_pred hhhhh----------HHHHHhcccCcEEEEEE
Confidence 76322 16789999999999854
No 435
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.13 E-value=0.0029 Score=61.26 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=53.9
Q ss_pred eeEeeccCCcchhhhhccC-CCceEEEecccCCC-Cch-hH-------Hhhccccch--hcccccCCCC-CCCccchhhc
Q 008748 401 RNVMDMNSNLGGFAAALKD-KDVWVMNVAPVRMS-ARL-KI-------IYDRGLIGT--VHDWCESFST-YPRTYDLLHA 467 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~-~~~wvmnv~p~~~~-~~l-~~-------i~~rgl~g~--~~~~ce~~~t-yprtydl~h~ 467 (555)
..|+|++||.|.++..|.. .+- .+|+=+|.. ..+ .+ +.+.|+-.+ .+.=.+.++. +.-.+|.++.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~--~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQN--TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTT--EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 5799999999999999872 333 346666644 444 22 123455322 1111223321 1133444443
Q ss_pred ccccccc-ccCCCChhhhhhhhcccccCCceEEE
Q 008748 468 WKVFSEI-EERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 468 ~~~~s~~-~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
..-+... ...+-....+|-||-|+|||||.+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 2211110 01112245689999999999999999
No 436
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.02 E-value=0.002 Score=61.97 Aligned_cols=93 Identities=14% Similarity=0.233 Sum_probs=60.7
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc----cc---cc-hhcccccCCCCC--CCccchhhcc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR----GL---IG-TVHDWCESFSTY--PRTYDLLHAW 468 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r----gl---~g-~~~~~ce~~~ty--prtydl~h~~ 468 (555)
.+|+|++||.|.++..|... |- -+|+-++.. ..+...-++ |+ |- +..|..+..+.. +.+||+|-++
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPE--ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 48999999999999888643 21 245555543 444443333 43 21 223444322222 4689999876
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
..++ ....++-++-|+|+|||.+++.|
T Consensus 134 ~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AAKG-------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GGGS-------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 6543 36788899999999999999975
No 437
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=95.96 E-value=0.0025 Score=69.00 Aligned_cols=95 Identities=14% Similarity=0.163 Sum_probs=60.7
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCCCchh----HHhhccc---cchh-cccccCCCCCCCccchhhccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMSARLK----IIYDRGL---IGTV-HDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~~~l~----~i~~rgl---~g~~-~~~ce~~~typrtydl~h~~~~~ 471 (555)
-..|+|++||.|.++..|...+.. .|+-++....+. .+.+.|| |-+. .|+-+ + .+|..||+|-+..++
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPMG 234 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCCH
T ss_pred CCEEEEecCcccHHHHHHHHcCCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCch
Confidence 358999999999999888765432 344444332222 2344465 2222 23333 2 356789999987765
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEE
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVII 500 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~ 500 (555)
..+.. -.+..++.++-|+|+|||.+++
T Consensus 235 ~~~~~--e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YMLFN--ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHTC--HHHHHHHHHGGGGEEEEEEEES
T ss_pred HhcCc--HHHHHHHHHHHHhcCCCCEEEE
Confidence 43221 1356778899999999999984
No 438
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.96 E-value=0.00079 Score=60.78 Aligned_cols=94 Identities=9% Similarity=0.142 Sum_probs=56.5
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccc-cch-hcccccCCCCCC---Cccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL-IGT-VHDWCESFSTYP---RTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl-~g~-~~~~ce~~~typ---rtydl~h~~~~ 470 (555)
.+|+|++||.|.++.+|...-. +|+-++.. ..+...-+ .|+ +-+ ..|+.+..+..+ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 4799999999999988865421 25555543 33333222 232 111 123333222222 27999999887
Q ss_pred ccccccCCCChhhhhhhhc--ccccCCceEEEecc
Q 008748 471 FSEIEERGCSFEDLLIEMD--RMLRPEGFVIIRDK 503 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~d--rilrp~g~~i~rd~ 503 (555)
|. . ....++-++- |+|+|||.+++...
T Consensus 120 ~~---~---~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 120 YA---M---DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp TT---S---CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred Cc---h---hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 75 1 2445566666 99999999998643
No 439
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.90 E-value=0.0026 Score=65.34 Aligned_cols=102 Identities=24% Similarity=0.368 Sum_probs=64.7
Q ss_pred CCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHh----hcccc----chhcccccCCCCCCCccchhh
Q 008748 396 QKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIY----DRGLI----GTVHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 396 ~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~----~rgl~----g~~~~~ce~~~typrtydl~h 466 (555)
....-.+|+|++||.|.++.+|... |-+ .++-++-+..+...- +.|+- =+-+|+.+. .|..||++-
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 254 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHV--SATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEP---LPRKADAII 254 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSC---CSSCEEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCC--EEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCC---CCCCccEEE
Confidence 3345678999999999999888643 222 222233233444322 23432 233455543 456799999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEecch
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS 504 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~ 504 (555)
+.++|..+... ....+|-++-|+|+|||.++|-|..
T Consensus 255 ~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 255 LSFVLLNWPDH--DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 88887643221 1257899999999999999987643
No 440
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.90 E-value=0.0032 Score=64.90 Aligned_cols=101 Identities=15% Similarity=0.296 Sum_probs=64.1
Q ss_pred cCCCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhh----ccccc----hhcccccCCCCCCCccchh
Q 008748 395 AQKNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD----RGLIG----TVHDWCESFSTYPRTYDLL 465 (555)
Q Consensus 395 ~~~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~----rgl~g----~~~~~ce~~~typrtydl~ 465 (555)
+....-.+|+|++||.|.++.+|.+. |-. .|+-+|-+..+...-+ .|+-+ +-+|..+. .+|. +|++
T Consensus 186 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v 260 (359)
T 1x19_A 186 AKLDGVKKMIDVGGGIGDISAAMLKHFPEL--DSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAV 260 (359)
T ss_dssp CCCTTCCEEEEESCTTCHHHHHHHHHCTTC--EEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEE
T ss_pred cCCCCCCEEEEECCcccHHHHHHHHHCCCC--eEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEE
Confidence 34456789999999999999998643 211 2222333334443332 25432 23444432 2333 4999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 466 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 466 h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.+..+|..+.. -....+|-++-|+|+|||.++|-|
T Consensus 261 ~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 261 LFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEechhccCCH--HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99888864322 125788999999999999998866
No 441
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.87 E-value=0.017 Score=56.80 Aligned_cols=120 Identities=11% Similarity=0.116 Sum_probs=71.7
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----h---ccc---cchhc-ccccCCC-----CC-C
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----D---RGL---IGTVH-DWCESFS-----TY-P 459 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~---rgl---~g~~~-~~ce~~~-----ty-p 459 (555)
.-.+|+|++||.|.++..|... |- .+|+-++-. ..+...- . .|+ +-+++ |..+..+ .+ +
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 3458999999999998777543 22 345555543 3232221 1 233 22222 2222111 12 4
Q ss_pred Cccchhhcccccccc--------------ccCCCChhhhhhhhcccccCCceEEEecchhHHHHHHHHHhhcCccc
Q 008748 460 RTYDLLHAWKVFSEI--------------EERGCSFEDLLIEMDRMLRPEGFVIIRDKSSIINYIRKFITALKWDG 521 (555)
Q Consensus 460 rtydl~h~~~~~s~~--------------~~~~c~~~~~~~e~drilrp~g~~i~rd~~~~~~~~~~~~~~~~w~~ 521 (555)
.+||+|-++--|... ....+.+..++-++-|+|+|||.+++--..+.+.++.+.+..- |..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 689999988444311 1123668899999999999999998766666677777777763 664
No 442
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.85 E-value=0.0035 Score=61.48 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=69.5
Q ss_pred eeEeeccCCcchhhhhccCC---CceEEEecccCCC-Cch----hHHhhc-cccchhcccccCC--CCCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK---DVWVMNVAPVRMS-ARL----KIIYDR-GLIGTVHDWCESF--STYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~---~~wvmnv~p~~~~-~~l----~~i~~r-gl~g~~~~~ce~~--~typrtydl~h~~~ 469 (555)
-.|+|++||.|++++.|.+. .- .|+-++-. .-+ ...-+| .+.-+..|-.++. ...+.+||+|.++.
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G---~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNG---KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTS---EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCC---EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 57999999999999887642 11 23333322 211 122222 2333344433321 11245788887663
Q ss_pred cccccccCCCChhhhhh-hhcccccCCceEEEe----------cchhHHHHHHHHHhhcCccceecccccccccCCCCCc
Q 008748 470 VFSEIEERGCSFEDLLI-EMDRMLRPEGFVIIR----------DKSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEE 538 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~-e~drilrp~g~~i~r----------d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 538 (555)
-+ .....+|+ .+.|.|+|||.+++. +..++...+.+.++.-..+.. ..+ .-+|+. .+.
T Consensus 155 a~-------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~-~~~--~l~p~~-~~h 223 (232)
T 3id6_C 155 AQ-------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETI-QII--NLDPYD-KDH 223 (232)
T ss_dssp CC-------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEE-EEE--ECTTTC-SSC
T ss_pred CC-------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEE-EEe--ccCCCc-Cce
Confidence 32 23455555 456699999999975 111233344444443334431 122 223442 457
Q ss_pred eEEEEEecc
Q 008748 539 RVLIAKKKL 547 (555)
Q Consensus 539 ~~l~~~k~~ 547 (555)
-+++++|++
T Consensus 224 ~~v~~~~~~ 232 (232)
T 3id6_C 224 AIVLSKYKG 232 (232)
T ss_dssp EEEEEEEC-
T ss_pred EEEEEEeCC
Confidence 788888863
No 443
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=95.84 E-value=0.003 Score=60.74 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=62.4
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-C----chhHHhhc-cccchhcccccC--CCCCCCccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-A----RLKIIYDR-GLIGTVHDWCES--FSTYPRTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~----~l~~i~~r-gl~g~~~~~ce~--~~typrtydl~h~~~~ 470 (555)
..|+|++||.|+|+..|.+. |-. .|+-++-. . .+...-.+ ++--+..|..+. ++..+.+||+|.++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~--~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDG--LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC--EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 47999999999999988653 211 23333332 1 12222221 222223344331 2223468999987543
Q ss_pred ccccccCCCCh-hhhhhhhcccccCCceEEEecchh----------HHHHHHHHHhhcCccc
Q 008748 471 FSEIEERGCSF-EDLLIEMDRMLRPEGFVIIRDKSS----------IINYIRKFITALKWDG 521 (555)
Q Consensus 471 ~s~~~~~~c~~-~~~~~e~drilrp~g~~i~rd~~~----------~~~~~~~~~~~~~w~~ 521 (555)
. ... ..++.++-|+|+|||.+++.-... ++.+-.+++....|+.
T Consensus 157 -~------~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 211 (233)
T 2ipx_A 157 -Q------PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKP 211 (233)
T ss_dssp -C------TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEE
T ss_pred -C------ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCce
Confidence 1 112 345677999999999999853321 1222245566666765
No 444
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.77 E-value=0.015 Score=58.81 Aligned_cols=145 Identities=10% Similarity=0.049 Sum_probs=74.7
Q ss_pred CcceeEeeccCCcchhhhhccCC-CceEEEecccCC-CCchhHHhhc------------cccchhcccccCCCCCCCccc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRM-SARLKIIYDR------------GLIGTVHDWCESFSTYPRTYD 463 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~-~~~l~~i~~r------------gl~g~~~~~ce~~~typrtyd 463 (555)
..-++|+|++||.|+++..|... ++- .|+=++- +.-+.+.-++ .+-=+..|..+.....+.+||
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~--~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCC--EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 45679999999999999988776 443 3333332 2222222111 111122343333334467999
Q ss_pred hhhcccccccccc-CCCChhhhhhhhcccccCCceEEEec-----chhHHHHHHHHHhhcCccceecccccccccCCCCC
Q 008748 464 LLHAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSE 537 (555)
Q Consensus 464 l~h~~~~~s~~~~-~~c~~~~~~~e~drilrp~g~~i~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 537 (555)
+|-.+.... ... ...-...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+......--. +..+.
T Consensus 160 vIi~D~~~p-~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~--~p~g~ 236 (294)
T 3adn_A 160 VIISDCTDP-IGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPT--YYGGI 236 (294)
T ss_dssp EEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTT--SSSSE
T ss_pred EEEECCCCc-cCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecc--cCCCc
Confidence 998754321 111 11112678889999999999999962 2233444444444332222211110001 11234
Q ss_pred ceEEEEEecc
Q 008748 538 ERVLIAKKKL 547 (555)
Q Consensus 538 ~~~l~~~k~~ 547 (555)
..+++|.|+.
T Consensus 237 ~~f~~as~~~ 246 (294)
T 3adn_A 237 MTFAWATDND 246 (294)
T ss_dssp EEEEEEESCT
T ss_pred eEEEEEeCCc
Confidence 5788898875
No 445
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=95.77 E-value=0.0028 Score=61.22 Aligned_cols=131 Identities=11% Similarity=0.053 Sum_probs=75.7
Q ss_pred eEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhH----Hhhcccc-c---h-hcccccCCCCC-CCccchhhcc
Q 008748 402 NVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKI----IYDRGLI-G---T-VHDWCESFSTY-PRTYDLLHAW 468 (555)
Q Consensus 402 n~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~----i~~rgl~-g---~-~~~~ce~~~ty-prtydl~h~~ 468 (555)
+|+|++||.|.++.+|... +- -.|+-++.. ..+.+ +-..|+- . + ..|-.+.++.. +.+||+|-.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADN--TTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTT--SEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 8999999999988877541 11 134444432 23322 2222432 1 1 11222323333 4789999765
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEecch------------hHHHHHHHHHhhcCccceecccccccccCCCC
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS------------SIINYIRKFITALKWDGWLSEVEPRIDALSSS 536 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~------------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 536 (555)
.-.. ....++-++-|+|||||.+++.|-. .....++++...++++-++... -=| -
T Consensus 137 ~~~~-------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~lp---~ 203 (221)
T 3dr5_A 137 VSPM-------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVA---RLP---L 203 (221)
T ss_dssp CCTT-------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEE---EES---S
T ss_pred CcHH-------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEE---Eee---c
Confidence 4222 3556788889999999999985432 2234567777777776422111 112 2
Q ss_pred CceEEEEEecc
Q 008748 537 EERVLIAKKKL 547 (555)
Q Consensus 537 ~~~~l~~~k~~ 547 (555)
.+.+++++|.+
T Consensus 204 gdGl~~~~~~~ 214 (221)
T 3dr5_A 204 GAGLTVVTKAL 214 (221)
T ss_dssp TTCEEEEEECC
T ss_pred cchHHHHHHHH
Confidence 56799999976
No 446
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.75 E-value=0.00063 Score=65.68 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=60.0
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHH----hhccc---cchh-cccccCCCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKII----YDRGL---IGTV-HDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i----~~rgl---~g~~-~~~ce~~~typrtydl~h~~~~~ 471 (555)
..|+|++||.|+++.+|...- ..|+-++-. ..+... -..|+ +-++ .|..+. + -+.+||+|.++..|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL-A-SFLKADVVFLSPPW 154 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-G-GGCCCSEEEECCCC
T ss_pred CEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh-c-ccCCCCEEEECCCc
Confidence 479999999999999997653 355555543 333332 22233 2122 233322 2 24699999999888
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
..... ....+.|+-|+|+|||.+|+..
T Consensus 155 ~~~~~----~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPDY----ATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGGG----GGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcch----hhhHHHHHHhhcCCcceeHHHH
Confidence 74321 2336779999999999987764
No 447
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.74 E-value=0.035 Score=54.56 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=61.3
Q ss_pred CEEEEECCCCcHHHHHHhcC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEe-CCCCCCCCCCCccEEEecccc-
Q 008748 157 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVL-GTKRLPYPSRSFELAHCSRCR- 229 (555)
Q Consensus 157 ~~VLDIGCGtG~~a~~La~~----~V~~vdis~~dls~a~i~~A~~rg-~~v~~~~~-d~~~Lp~~d~sFDlVv~s~~~- 229 (555)
.+|||+||++|.++.+.+.. .|.++|+-+....+.+. ....| ..+.|..+ |...++- ..+|.|+|--.-
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~--~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIgeS 155 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP--MSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIGES 155 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC--CCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCCCC
T ss_pred CEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch--hhhcCcCceEEEeccceeecCC--ccccEEEEecCCC
Confidence 48999999999999987753 68888887755421110 01122 24677777 7655543 569999985421
Q ss_pred --cccccch--HHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 230 --IDWLQRD--GILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 230 --l~~~~d~--~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
...++.. -.+|.-+.+.|++ |-|++-+-..
T Consensus 156 s~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 156 SPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred CCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 1111111 1156666788998 7888755443
No 448
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=95.74 E-value=0.0028 Score=63.26 Aligned_cols=111 Identities=9% Similarity=0.043 Sum_probs=57.0
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccC--CC-CchhH-Hhhccccch--hcccccCCCCCCCccchhhccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVR--MS-ARLKI-IYDRGLIGT--VHDWCESFSTYPRTYDLLHAWKVFSE 473 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~--~~-~~l~~-i~~rgl~g~--~~~~ce~~~typrtydl~h~~~~~s~ 473 (555)
..|+|++||.|+|+..|... .|.-+-+-|.. +. +.+.. .+.-++.-+ -.|-. .++ +.+||+|-++..+..
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~~~ 152 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGESS 152 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCcccC
Confidence 57999999999998877664 34433333420 00 00000 000011111 11222 233 579999988754220
Q ss_pred -cc-cCCCChhhhhhhhcccccCCc--eEEEe----cchhHHHHHHHHH
Q 008748 474 -IE-ERGCSFEDLLIEMDRMLRPEG--FVIIR----DKSSIINYIRKFI 514 (555)
Q Consensus 474 -~~-~~~c~~~~~~~e~drilrp~g--~~i~r----d~~~~~~~~~~~~ 514 (555)
.. .+.-....+|-++.|+|+||| .+++. +..++++.++.+.
T Consensus 153 ~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~ 201 (265)
T 2oxt_A 153 PKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQ 201 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHH
T ss_pred CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHH
Confidence 00 000000126788999999999 89885 3443334444433
No 449
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.67 E-value=0.0026 Score=60.09 Aligned_cols=99 Identities=8% Similarity=0.137 Sum_probs=60.4
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccc----cchh-cccccCCCCC-CCc-cchhhcc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL----IGTV-HDWCESFSTY-PRT-YDLLHAW 468 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl----~g~~-~~~ce~~~ty-prt-ydl~h~~ 468 (555)
..|+|++||.|+|+..+..... -.|+-++.. ..+...-+ .|+ +-++ .|..+..... +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3699999999999886543322 245666644 44443322 233 1112 2333322222 468 9999888
Q ss_pred ccccccccCCCChhhhhhhh--cccccCCceEEEecchhH
Q 008748 469 KVFSEIEERGCSFEDLLIEM--DRMLRPEGFVIIRDKSSI 506 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~--drilrp~g~~i~rd~~~~ 506 (555)
..|. . -....++-++ -|+|+|||.+++......
T Consensus 133 ~~~~-~----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PPFH-F----NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSS-S----CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCC-C----ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 7764 1 1255677777 789999999999765544
No 450
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=95.66 E-value=0.0026 Score=61.57 Aligned_cols=92 Identities=13% Similarity=0.254 Sum_probs=54.7
Q ss_pred eeEeeccCCcchhhhhccCC-C-ceEEEecccCCC-CchhHHhh----ccccc---h-hcc----------------ccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRMS-ARLKIIYD----RGLIG---T-VHD----------------WCE 453 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~~-~~l~~i~~----rgl~g---~-~~~----------------~ce 453 (555)
.+|+|++||.|.++..|... + . -+|+-++.. ..+...-+ .|+-. + ..| |-+
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPED--GKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 47999999999999888642 1 1 134444432 33332222 23311 1 111 222
Q ss_pred CCCCCC-CccchhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 454 SFSTYP-RTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 454 ~~~typ-rtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.|++ + .+||+|..+.... ....++-++-|+|||||.+++.+
T Consensus 140 ~f~~-~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAF-GPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCC-STTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccC-CCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 2222 2 6899998664322 24577889999999999999976
No 451
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=95.61 E-value=0.0033 Score=60.76 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=55.8
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccccc---h-hcccccCCCCCC-----Cccchh
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGLIG---T-VHDWCESFSTYP-----RTYDLL 465 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl~g---~-~~~~ce~~~typ-----rtydl~ 465 (555)
++|+|++||.|.++.+|... +- --.|+-++.. ..+.+.- ..|+-. + ..|..+.++..| .+||+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPP-DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 58999999999998888653 10 0134444432 3333322 224421 1 122222222222 689999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 466 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 466 h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
..+.... ....++-++-|+|||||.+++.|
T Consensus 153 ~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 153 FIDADKR-------NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EECSCGG-------GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEeC
Confidence 7665321 35677888899999999999964
No 452
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.60 E-value=0.0064 Score=61.60 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=76.9
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc------cc----cc-hhcccccCCCC-CCCccch
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------GL----IG-TVHDWCESFST-YPRTYDL 464 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r------gl----~g-~~~~~ce~~~t-yprtydl 464 (555)
.-++|+|++||.|+++..|.+. ++- .|+=++-. .-+.+.-++ ++ +- +..|..+-... -+.+||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3478999999999999999865 332 33333322 222222111 11 11 11222221111 2578999
Q ss_pred hhccccccccccCCCChhhhhhhhcccccCCceEEEecc-----hhHHHHHHHHHhhcCccc-eeccccccccc-CCCCC
Q 008748 465 LHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-----SSIINYIRKFITALKWDG-WLSEVEPRIDA-LSSSE 537 (555)
Q Consensus 465 ~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~-----~~~~~~~~~~~~~~~w~~-~~~~~~~~~~~-~~~~~ 537 (555)
|-++..........---..++-++-|+|+|||.+++... ......+.+.++...+.. .+... .-| +..+.
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~---~vP~yp~g~ 249 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALM---HVPTYPCGS 249 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEEC---CCTTSTTSC
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEe---ecccccCcc
Confidence 998654321000101115778899999999999999632 245666777777665543 21111 111 11345
Q ss_pred ceEEEEEec
Q 008748 538 ERVLIAKKK 546 (555)
Q Consensus 538 ~~~l~~~k~ 546 (555)
-.+++|.|+
T Consensus 250 w~f~~as~~ 258 (304)
T 3bwc_A 250 IGTLVCSKK 258 (304)
T ss_dssp CEEEEEESS
T ss_pred eEEEEEeCC
Confidence 678899986
No 453
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=95.59 E-value=0.0031 Score=65.41 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=61.1
Q ss_pred CCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhh-ccccchhcccccCCCCCCCccchhhcccccccc
Q 008748 397 KNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYD-RGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 397 ~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~-rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
......|+|++||.|.++.+|.+. |-. .++-++-+..+...-+ .++--+-+|..++ .|. ||++.+.+++-.+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~--~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~~~-~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLI--KGINFDLPQVIENAPPLSGIEHVGGDMFAS---VPQ-GDAMILKAVCHNW 280 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTC---CCC-EEEEEEESSGGGS
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCC--eEEEeChHHHHHhhhhcCCCEEEeCCcccC---CCC-CCEEEEecccccC
Confidence 345679999999999999998643 211 1222221111111111 1232334455553 455 9999999888744
Q ss_pred ccCCCChhhhhhhhcccccCCceEEEec
Q 008748 475 EERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 475 ~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
... ....+|-++-|+|+|||.++|-|
T Consensus 281 ~d~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 281 SDE--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 322 13489999999999999999874
No 454
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=95.59 E-value=0.0048 Score=59.43 Aligned_cols=114 Identities=10% Similarity=0.105 Sum_probs=66.4
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhH----Hhhccccc---hhcccccCCC--CCCCccchhhcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKI----IYDRGLIG---TVHDWCESFS--TYPRTYDLLHAW 468 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~----i~~rgl~g---~~~~~ce~~~--typrtydl~h~~ 468 (555)
-..|+|++||.|.++.+|... |- .+|+-++-. .-+.. +-+.|+-. +-.|-.+-++ .-+.+||+|+..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~--~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPE--QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCC--CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 357999999999999988632 21 245555543 33333 33345422 1223222211 125799999865
Q ss_pred ccccccc-----cCCCChhhhhhhhcccccCCceEEEe-cchhHHHHHHHHHhh
Q 008748 469 KVFSEIE-----ERGCSFEDLLIEMDRMLRPEGFVIIR-DKSSIINYIRKFITA 516 (555)
Q Consensus 469 ~~~s~~~-----~~~c~~~~~~~e~drilrp~g~~i~r-d~~~~~~~~~~~~~~ 516 (555)
.... +. +++---..++-++-|+|+|||.+++. |.....+.+.+++..
T Consensus 113 ~~~p-~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 113 FPDP-WHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp SCCC-CCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCC-ccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 2211 11 11122235889999999999999986 555556666666654
No 455
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.56 E-value=0.0023 Score=61.06 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=53.3
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc----c--------ccchhcccccCCCCCCCccchh
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR----G--------LIGTVHDWCESFSTYPRTYDLL 465 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r----g--------l~g~~~~~ce~~~typrtydl~ 465 (555)
.+|+|++||.|++++.|... +- -+|+-++-. ..+...-++ | +--+..|..+.+. -+.+||+|
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~i 155 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCT--GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDAI 155 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCC--cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCEE
Confidence 48999999999999888642 11 134444432 333332211 2 1112234433321 24589999
Q ss_pred hccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 466 HAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 466 h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+++..+. .++-++-|+|+|||.+++--
T Consensus 156 ~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 156 HVGAAAP----------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EECSBBS----------SCCHHHHHTEEEEEEEEEEE
T ss_pred EECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 9776553 34567889999999999853
No 456
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.52 E-value=0.01 Score=57.05 Aligned_cols=104 Identities=12% Similarity=0.010 Sum_probs=66.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc----cc---c-chhcccccCCCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR----GL---I-GTVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r----gl---~-g~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++.+|... ..+|+-++-. ..+...-++ |+ + -+..|..+.+. -+.+||++-++-
T Consensus 93 ~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-PEGIFHAAFVDV-- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-CTTCBSEEEECS--
T ss_pred CEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-CCCcccEEEECC--
Confidence 47999999999999888765 2356666643 455544433 43 1 12234444330 135799886421
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEecc-hhHHHHHHHHHhhc
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITAL 517 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~-~~~~~~~~~~~~~~ 517 (555)
-+...++-++-|+|+|||.+++-.. .+-+.++...+...
T Consensus 167 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 167 -------REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp -------SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred -------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 1356788899999999999998765 45566666665543
No 457
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.50 E-value=0.012 Score=57.07 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=70.4
Q ss_pred ceeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc----cccc----hhcccccCCCCCCCccchhhcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR----GLIG----TVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r----gl~g----~~~~~ce~~~typrtydl~h~~ 468 (555)
=.+|+|++||.|+++.+|... |- ..|+-++-. ..+...-++ |+-. +..|..+.|+. .+||+|-++
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~v~~~ 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPE--GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE--ENVDHVILD 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC--CSEEEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHHhCCC--eEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC--CCcCEEEEC
Confidence 357999999999999988653 11 134444543 444443333 5432 34566666543 579998642
Q ss_pred ccccccccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhhcC
Q 008748 469 KVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITALK 518 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~~~ 518 (555)
- -....++-++-|+|+|||.+++-. ..+-+.++.+.++...
T Consensus 170 ~---------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 L---------PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp S---------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred C---------CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1 234678999999999999999864 4566777777777665
No 458
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.49 E-value=0.0084 Score=59.98 Aligned_cols=140 Identities=16% Similarity=0.076 Sum_probs=75.4
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhhc-----cc-----------cchh-cccccCCCCCCCc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYDR-----GL-----------IGTV-HDWCESFSTYPRT 461 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~r-----gl-----------~g~~-~~~ce~~~typrt 461 (555)
-++|+|++||.|+++..|...+. .+|+=++-. .-+.+.-++ |+ +-+. .|-.+-... +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 36899999999999999987643 244444432 222222111 22 1111 121111122 578
Q ss_pred cchhhcccccccccc-CCCChhhhhhhhcccccCCceEEEec-----chhHHHHHHHHHhhcCccceecccccccccCCC
Q 008748 462 YDLLHAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSS 535 (555)
Q Consensus 462 ydl~h~~~~~s~~~~-~~c~~~~~~~e~drilrp~g~~i~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 535 (555)
||+|-++.... ... ..--...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+..... .-|.-.
T Consensus 153 fD~Ii~d~~~~-~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~---~vP~~~ 228 (281)
T 1mjf_A 153 FDVIIADSTDP-VGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSF---PVIGYA 228 (281)
T ss_dssp EEEEEEECCCC-C-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEE---CCTTSS
T ss_pred eeEEEECCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEE---ecCCCC
Confidence 99998765321 111 00012567889999999999999862 334455555555544323321111 111112
Q ss_pred CCceEEEEEec
Q 008748 536 SEERVLIAKKK 546 (555)
Q Consensus 536 ~~~~~l~~~k~ 546 (555)
+...+++|.|+
T Consensus 229 g~~~~~~as~~ 239 (281)
T 1mjf_A 229 SPWAFLVGVKG 239 (281)
T ss_dssp SSEEEEEEEES
T ss_pred ceEEEEEeeCC
Confidence 45778999986
No 459
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.47 E-value=0.0053 Score=56.79 Aligned_cols=43 Identities=16% Similarity=0.103 Sum_probs=28.3
Q ss_pred Cccchhhcccccccccc----C---CCChhhhhhhhcccccCCceEEEec
Q 008748 460 RTYDLLHAWKVFSEIEE----R---GCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~----~---~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.+||+|-++..+..... . ......++-|+-|+|||||.+++.+
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 58999987654331000 0 0001467889999999999999973
No 460
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=95.46 E-value=0.0043 Score=60.78 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=55.5
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhccc-c-chhcccccCCCCCCCccchhhccccccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDRGL-I-GTVHDWCESFSTYPRTYDLLHAWKVFSEIE 475 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~rgl-~-g~~~~~ce~~~typrtydl~h~~~~~s~~~ 475 (555)
-.+|+|++||.|.++..|... +-. +|+-++-. ..+...-+++- + =+..|. +.++.-+.+||+|.+.+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEI--TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTS--EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESC-----
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC--eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCC-----
Confidence 347999999999999888754 221 34444433 44555544441 1 011122 223322368999986432
Q ss_pred cCCCChhhhhhhhcccccCCceEEEec
Q 008748 476 ERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 476 ~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
...+-|+-|+|||||.+++-+
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEE
T ss_pred ------hhhHHHHHHhcCCCcEEEEEE
Confidence 235789999999999999864
No 461
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.43 E-value=0.004 Score=79.69 Aligned_cols=98 Identities=16% Similarity=0.240 Sum_probs=43.5
Q ss_pred CCEEEEECCCCcHHHHHHhcC---------CCccccCChhhhhHHHHHHHHHcCCCeEEEEeCCCCC-CCCCCCccEEEe
Q 008748 156 IRNVLDVGCGVASFGAYLLSH---------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHC 225 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~---------~V~~vdis~~dls~a~i~~A~~rg~~v~~~~~d~~~L-p~~d~sFDlVv~ 225 (555)
..+||+||.|+|..+..+.+. .++..|+++.....++.++.. ..+.....|.... ++...+||+|++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---~di~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---LHVTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---HTEEEECCCSSCCCC-----CCEEEE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---cccccccccccccccCCCCceeEEEE
Confidence 358999999999765543321 345566666544444333321 1222222343332 345567999998
Q ss_pred cccccccccchHHHHHHHHhhcCCCcEEEEEc
Q 008748 226 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 257 (555)
Q Consensus 226 s~~~l~~~~d~~~~L~el~RvLkPGG~lvis~ 257 (555)
++ ++|-..+....|.++.++|||||++++..
T Consensus 1318 ~~-vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1318 NC-ALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EC-C--------------------CCEEEEEE
T ss_pred cc-cccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 87 68877888889999999999999998865
No 462
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=95.42 E-value=0.009 Score=62.04 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=60.3
Q ss_pred CCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhhc-cccchhcccccCCCCCCCccchhhcccccccc
Q 008748 397 KNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYDR-GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 397 ~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~r-gl~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
....+.|+|++||.|.++.+|.+. |-. .++-.+-+..+...-++ ++-=+-+|.-++ +|.. |++.+.+++-.+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~p~~-D~v~~~~vlh~~ 274 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSI--NAINFDLPHVIQDAPAFSGVEHLGGDMFDG---VPKG-DAIFIKWICHDW 274 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGGB
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCC--EEEEEehHHHHHhhhhcCCCEEEecCCCCC---CCCC-CEEEEechhhcC
Confidence 456789999999999999999642 321 11112211111111111 222233455444 4544 999988888644
Q ss_pred ccCCCChhhhhhhhcccccCCceEEEec
Q 008748 475 EERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 475 ~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
... ....+|-++=|.|+|||.++|-|
T Consensus 275 ~~~--~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 275 SDE--HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 322 24578999999999999999865
No 463
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.40 E-value=0.0066 Score=60.96 Aligned_cols=130 Identities=13% Similarity=0.193 Sum_probs=81.9
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccc---cc-hhcccccCCCCCCCcc---chhhcc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGL---IG-TVHDWCESFSTYPRTY---DLLHAW 468 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl---~g-~~~~~ce~~~typrty---dl~h~~ 468 (555)
.+|+|++||.|.++.+|...|-+ +|+-++-. .-|.+.-+ .|+ +- +..||.+.+ +.+| |+|-++
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---KEKFASIEMILSN 199 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---GGGTTTCCEEEEC
T ss_pred CEEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---ccccCCCCEEEEc
Confidence 36999999999999998754433 45555543 44444322 354 22 234666644 3578 999876
Q ss_pred cccccccc---------------CCCChhhhhhhhc-ccccCCceEEEecchhHHHHHHHHHhhcCccceeccccccccc
Q 008748 469 KVFSEIEE---------------RGCSFEDLLIEMD-RMLRPEGFVIIRDKSSIINYIRKFITALKWDGWLSEVEPRIDA 532 (555)
Q Consensus 469 ~~~s~~~~---------------~~c~~~~~~~e~d-rilrp~g~~i~rd~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 532 (555)
--+..... ..++-..++-++= +.|+|||++++--..+--+.|++++... ++. .+
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~--~~~-~D------- 269 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT--VFL-KD------- 269 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC--EEE-EC-------
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC--Cee-cc-------
Confidence 22221000 1123337788888 9999999999976666677787777765 331 11
Q ss_pred CCCCCceEEEEEec
Q 008748 533 LSSSEERVLIAKKK 546 (555)
Q Consensus 533 ~~~~~~~~l~~~k~ 546 (555)
+ .+.++++++.++
T Consensus 270 ~-~g~~R~~~~~~k 282 (284)
T 1nv8_A 270 S-AGKYRFLLLNRR 282 (284)
T ss_dssp T-TSSEEEEEEECC
T ss_pred c-CCCceEEEEEEc
Confidence 2 367899988875
No 464
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.32 E-value=0.0061 Score=58.06 Aligned_cols=94 Identities=14% Similarity=0.064 Sum_probs=56.3
Q ss_pred ceeEeeccCCcchhhhhccCC-C-ceEEEecccCC-CCchhHHh----hcccc---chh-cccccCCCCCC-----Cccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRM-SARLKIIY----DRGLI---GTV-HDWCESFSTYP-----RTYD 463 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~-~~~l~~i~----~rgl~---g~~-~~~ce~~~typ-----rtyd 463 (555)
-.+|+|++||.|.++.+|... + - -+|+-++. +..+.+.- +.|+- -+. .|..+.++..+ .+||
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPAD--GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 358999999999999888653 1 1 13444443 23333322 22441 111 12222222222 6899
Q ss_pred hhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 464 LLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 464 l~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+|..+.- .-....++-++-|+|||||.+++.|
T Consensus 148 ~v~~d~~-------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 148 VAVVDAD-------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEECSC-------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC-------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9886543 2235678888999999999999954
No 465
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=95.24 E-value=0.0046 Score=63.58 Aligned_cols=99 Identities=17% Similarity=0.169 Sum_probs=60.4
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHh----hccccchhcccccCCCCCCCccchhhcccccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIY----DRGLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~----~rgl~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
.+|+|++||.|.++.+|... |-+ +|+-++.. .-+...- ..|+-..+ -+...++.-+.+||+|-++..|...
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKI--RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTC--BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCcccC
Confidence 37999999999999888643 221 34444432 2233222 23432211 1223333336799999998887621
Q ss_pred c-cCCCChhhhhhhhcccccCCceEEEec
Q 008748 475 E-ERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 475 ~-~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
. ...-....++-|+-|+|+|||.+++-.
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 0 011135688999999999999999864
No 466
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=95.19 E-value=0.0081 Score=60.29 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=51.2
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccC-----CC---Cch--hHHhhccccchhcccccCCCCCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVR-----MS---ARL--KIIYDRGLIGTVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~-----~~---~~l--~~i~~rgl~g~~~~~ce~~~typrtydl~h~~~ 469 (555)
..|+|++||.|+|+..|... .|.-+-+-|.. .+ ..+ ++.+-.+ -.|- +.++ +.+||+|-++.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~----~~D~-~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKS----KVDV-TKME--PFQADTVLCDI 156 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEEC----SCCG-GGCC--CCCCSEEEECC
T ss_pred CEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEec----cCcH-hhCC--CCCcCEEEECC
Confidence 57999999999998887665 33333333320 00 000 1111100 1122 2244 57899998765
Q ss_pred cccccc--cCCCChhhhhhhhcccccCCc--eEEEe
Q 008748 470 VFSEIE--ERGCSFEDLLIEMDRMLRPEG--FVIIR 501 (555)
Q Consensus 470 ~~s~~~--~~~c~~~~~~~e~drilrp~g--~~i~r 501 (555)
.+.... .+.-....+|-++.|+|+||| .+++.
T Consensus 157 ~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 157 GESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 422100 000000126788999999999 88875
No 467
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=95.19 E-value=0.0033 Score=57.56 Aligned_cols=96 Identities=17% Similarity=0.215 Sum_probs=57.9
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhH----Hhhccc---cch-hcccccCCCCC---CCccchhhcc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKI----IYDRGL---IGT-VHDWCESFSTY---PRTYDLLHAW 468 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~----i~~rgl---~g~-~~~~ce~~~ty---prtydl~h~~ 468 (555)
.+|+|++||.|.++.++...+. -+|+-++-. ..+.. +-..|+ +-+ ..|+.+..+.. +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 4899999999999887765542 234445432 33332 222233 212 22444422211 4689999988
Q ss_pred ccccccccCCCChhhhhhhh--cccccCCceEEEecc
Q 008748 469 KVFSEIEERGCSFEDLLIEM--DRMLRPEGFVIIRDK 503 (555)
Q Consensus 469 ~~~s~~~~~~c~~~~~~~e~--drilrp~g~~i~rd~ 503 (555)
..|.. -....++-++ -|+|+|||.+++...
T Consensus 124 ~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 124 PPYAK-----QEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp CCGGG-----CCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCCc-----hhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 77651 1245556556 999999999998643
No 468
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.19 E-value=0.0042 Score=60.37 Aligned_cols=94 Identities=9% Similarity=0.048 Sum_probs=56.7
Q ss_pred ceeEeeccCCcchhhhhccCC-C-ceEEEecccCCC-CchhHH----hhccccc---h-hcccccCCCCC------CCcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRMS-ARLKII----YDRGLIG---T-VHDWCESFSTY------PRTY 462 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~~-~~l~~i----~~rgl~g---~-~~~~ce~~~ty------prty 462 (555)
-++|+|++||.|+.+.+|... | - -.|+-++-. ..+.+. -..|+-. + ..|..+.++.. +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 468999999999988877532 1 1 134444432 333332 2335421 1 12333332322 4689
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 463 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 463 dl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
|+|-.++--. ....++-++-|+|||||.+++.+
T Consensus 149 D~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEec
Confidence 9997664211 25677888889999999999875
No 469
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.18 E-value=0.0083 Score=61.74 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=66.0
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----cccc----chhcccccCCCCC----CCccchhhc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLI----GTVHDWCESFSTY----PRTYDLLHA 467 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~----g~~~~~ce~~~ty----prtydl~h~ 467 (555)
..|+|++||.|+|+.++..... .|+-+|.. .-|...-+ .|+- -+++.=+..+... ..+||+|=+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4799999999999988876533 56667654 44443222 2331 1222111111111 358999876
Q ss_pred ccc-cccccc-----CCCChhhhhhhhcccccCCceEEEec-------chhHHHHHHHHHhhcCccc
Q 008748 468 WKV-FSEIEE-----RGCSFEDLLIEMDRMLRPEGFVIIRD-------KSSIINYIRKFITALKWDG 521 (555)
Q Consensus 468 ~~~-~s~~~~-----~~c~~~~~~~e~drilrp~g~~i~rd-------~~~~~~~~~~~~~~~~w~~ 521 (555)
+-- |..... ..-.+..++-++-|+|+|||.+++-. ...+.+.+++.+.....++
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 432 221000 00125678889999999999977642 2234445555555665554
No 470
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=95.18 E-value=0.0064 Score=57.54 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=66.1
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHH--------hhcccc--chhcccccCCCCCCCccchhhcc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKII--------YDRGLI--GTVHDWCESFSTYPRTYDLLHAW 468 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i--------~~rgl~--g~~~~~ce~~~typrtydl~h~~ 468 (555)
..|+|++||.|.++..|... |- -+|+-++-. ..|..+ -.+|+- -..+.=.+.++.-+.+ |.+.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~-- 103 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPS--RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH-- 103 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTT--EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE--
T ss_pred CEEEEecCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE--
Confidence 56999999999999998753 22 245555543 444432 134432 2222222334433344 6665
Q ss_pred cccc--ccc-cCCCChhhhhhhhcccccCCceEEEecc-------------------hhHHHHHHHHHhhcCccc
Q 008748 469 KVFS--EIE-ERGCSFEDLLIEMDRMLRPEGFVIIRDK-------------------SSIINYIRKFITALKWDG 521 (555)
Q Consensus 469 ~~~s--~~~-~~~c~~~~~~~e~drilrp~g~~i~rd~-------------------~~~~~~~~~~~~~~~w~~ 521 (555)
-+|+ ... .+--+...+|-||-|+|||||.+++... ..+.+.++.++..-.|++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i 178 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKL 178 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCc
Confidence 2222 000 0001126889999999999999998521 122334777777777775
No 471
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=95.18 E-value=0.01 Score=57.43 Aligned_cols=108 Identities=13% Similarity=0.105 Sum_probs=66.4
Q ss_pred ceeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc-----cc--c-chhcccccC-CCCCCCccchhhc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR-----GL--I-GTVHDWCES-FSTYPRTYDLLHA 467 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r-----gl--~-g~~~~~ce~-~~typrtydl~h~ 467 (555)
-.+|+|++||.|.++.+|... |- -+|+-++.. ..+...-++ |. + -...|..+. |+ +.+||+|-+
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~--~~~~D~v~~ 172 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEK--GLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE--EAAYDGVAL 172 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC--TTCEEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC--CCCcCEEEE
Confidence 348999999999999888653 11 134445532 444443333 41 1 122344443 22 258998875
Q ss_pred cccccccccCCCChhhhhhhhcccccCCceEEEecch-hHHHHHHHHHhhcCcc
Q 008748 468 WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKS-SIINYIRKFITALKWD 520 (555)
Q Consensus 468 ~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~-~~~~~~~~~~~~~~w~ 520 (555)
+ . -....++-++-|+|+|||.+++-... +-+.++.+.+....|.
T Consensus 173 ~-----~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 D-----L----MEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp E-----S----SCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred C-----C----cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 2 1 13457899999999999999986644 3555666666555554
No 472
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.16 E-value=0.016 Score=58.37 Aligned_cols=143 Identities=10% Similarity=0.024 Sum_probs=74.7
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc------cc----cch-hcccccCCCCCCCccchhh
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------GL----IGT-VHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r------gl----~g~-~~~~ce~~~typrtydl~h 466 (555)
-.+|+|++||.|+++.+|... ++. +|+-++-. .-+.+.-++ |+ +-+ ..|..+.....+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 378999999999999999876 432 34444432 233322211 11 111 1222222223367899998
Q ss_pred ccccccc-ccc-CCCChhhhhhhhcccccCCceEEEec-----chhHHHHHHHHHhhcCccceecccccccccCCCCCce
Q 008748 467 AWKVFSE-IEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEER 539 (555)
Q Consensus 467 ~~~~~s~-~~~-~~c~~~~~~~e~drilrp~g~~i~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 539 (555)
++. +.. ... ..-....++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+......-.. +..+...
T Consensus 169 ~d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~--~p~g~~~ 245 (296)
T 1inl_A 169 IDS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTT--YPSGMWS 245 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTT--STTSEEE
T ss_pred EcC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCc--cCCCceE
Confidence 653 221 100 00012578889999999999999962 2333444444444432233211110001 1124567
Q ss_pred EEEEEecc
Q 008748 540 VLIAKKKL 547 (555)
Q Consensus 540 ~l~~~k~~ 547 (555)
+++|.|++
T Consensus 246 f~~as~~~ 253 (296)
T 1inl_A 246 YTFASKGI 253 (296)
T ss_dssp EEEEESSC
T ss_pred EEEecCCC
Confidence 88999874
No 473
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.16 E-value=0.003 Score=60.32 Aligned_cols=92 Identities=14% Similarity=0.191 Sum_probs=51.9
Q ss_pred eeEeeccCCcchhhhhccCC--C-ceEEEecccCCC-CchhHHh----hc-cccchhcccccC--CCCCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--D-VWVMNVAPVRMS-ARLKIIY----DR-GLIGTVHDWCES--FSTYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~-~wvmnv~p~~~~-~~l~~i~----~r-gl~g~~~~~ce~--~~typrtydl~h~~~ 469 (555)
.+|+|++||.|.++..|.+. + . .|+-++.. .-+.... ++ ++--+..|..+. +...+.+||+|-++.
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEG---KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCe---EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 47999999999999888643 1 1 22223322 1111111 11 222222333331 123356899998654
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
... -....++-++-|+|+|||.+++-
T Consensus 152 ~~~------~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 AQP------TQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CST------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCH------hHHHHHHHHHHHhcCCCCEEEEE
Confidence 311 11235589999999999999984
No 474
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.11 E-value=0.0073 Score=61.49 Aligned_cols=117 Identities=14% Similarity=0.090 Sum_probs=64.3
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc----ccc--chh-cccccCCCCCCCccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR----GLI--GTV-HDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r----gl~--g~~-~~~ce~~~typrtydl~h~~~~ 470 (555)
..|+|++||.|+++.+|... +- -.|+-++-. ..+..+-++ |+- -+. .|. +.++.++.+||+|-++--
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEECC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEeCC
Confidence 47999999999999888642 11 124445543 444444333 441 122 232 223334668999987532
Q ss_pred ccccc---cC-----CCC----------hhhhhhhhcccccCCceEEEec----chhHHHHHHHHHhhcCcc
Q 008748 471 FSEIE---ER-----GCS----------FEDLLIEMDRMLRPEGFVIIRD----KSSIINYIRKFITALKWD 520 (555)
Q Consensus 471 ~s~~~---~~-----~c~----------~~~~~~e~drilrp~g~~i~rd----~~~~~~~~~~~~~~~~w~ 520 (555)
.|-.. .+ +-. -..+|-++-|+|||||.+++.. ..+--..|+.+++...++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 22100 00 000 1478889999999999999842 122233455555554444
No 475
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.10 E-value=0.024 Score=56.57 Aligned_cols=144 Identities=12% Similarity=0.112 Sum_probs=76.3
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc------cc----cchh-cccccCCCCCCCccchh
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------GL----IGTV-HDWCESFSTYPRTYDLL 465 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r------gl----~g~~-~~~ce~~~typrtydl~ 465 (555)
.-++|+|++||.|+++..+... ++- .|+=++-. .-+.+.-+. |+ +-++ .|--+-....+.+||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 4578999999999999998876 432 23333321 222221111 11 1111 12111112235789999
Q ss_pred hcccccccccc-CCCChhhhhhhhcccccCCceEEEec-----chhHHHHHHHHHhhcCccceecccccccccCCCCCce
Q 008748 466 HAWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEER 539 (555)
Q Consensus 466 h~~~~~s~~~~-~~c~~~~~~~e~drilrp~g~~i~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 539 (555)
-++.... ... ..--...++-++-|+|+|||.+++.- ..+.+..+.+.++..=-.+......-.. +..+...
T Consensus 153 i~d~~~~-~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~--~~~g~w~ 229 (275)
T 1iy9_A 153 MVDSTEP-VGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPT--YPSGLWT 229 (275)
T ss_dssp EESCSSC-CSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTT--SGGGCEE
T ss_pred EECCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCc--ccCcceE
Confidence 8764332 111 01112578889999999999999973 2344555555555542233211110001 1123567
Q ss_pred EEEEEecc
Q 008748 540 VLIAKKKL 547 (555)
Q Consensus 540 ~l~~~k~~ 547 (555)
+++|.|++
T Consensus 230 ~~~ask~~ 237 (275)
T 1iy9_A 230 FTIGSKKY 237 (275)
T ss_dssp EEEEESSC
T ss_pred EEEeeCCC
Confidence 88999874
No 476
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.03 E-value=0.024 Score=57.16 Aligned_cols=94 Identities=20% Similarity=0.243 Sum_probs=57.8
Q ss_pred CeEEEEeCCCC-CC-CCCCCccEEEeccccc---c----------------cccchHHHHHHHHhhcCCCcEEEEEcCCC
Q 008748 202 PSTLGVLGTKR-LP-YPSRSFELAHCSRCRI---D----------------WLQRDGILLLELDRLLRPGGYFVYSSPEA 260 (555)
Q Consensus 202 ~v~~~~~d~~~-Lp-~~d~sFDlVv~s~~~l---~----------------~~~d~~~~L~el~RvLkPGG~lvis~P~~ 260 (555)
.+.+.++|... +. +++++||+|+++--.. . |......++.++.|+|||||.+++.....
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 45678888544 32 4678999999863211 1 11112347889999999999999877643
Q ss_pred CCC-Chhh----HHHHHHHHHHHHhcCcEEEEEeeceEEeecCC
Q 008748 261 YAH-DPEN----RRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 299 (555)
Q Consensus 261 ~~~-~~e~----~~~~~~l~~l~~~~gw~vv~~~~~~~iw~KPl 299 (555)
... .... ......+..++++.||.... ..+|.|+.
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 200 0000 01234677788899997653 45899875
No 477
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.01 E-value=0.01 Score=58.13 Aligned_cols=94 Identities=9% Similarity=0.037 Sum_probs=56.6
Q ss_pred ceeEeeccCCcchhhhhccCC-C-ceEEEecccCCC-CchhHH----hhcccc---chh-cccccCCCCC------CCcc
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-D-VWVMNVAPVRMS-ARLKII----YDRGLI---GTV-HDWCESFSTY------PRTY 462 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~-~wvmnv~p~~~~-~~l~~i----~~rgl~---g~~-~~~ce~~~ty------prty 462 (555)
-++|+|++||.|.++..|... | - -.|+-++.. ..+.+. -..|+- -+. .|..+..+.. +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPED--GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTT--CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 468999999999998877532 1 1 234444432 333322 223541 111 2333322222 4689
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 463 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 463 dl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
|+|-.+.-. -....++-++-|+|||||.+++.+
T Consensus 158 D~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK-------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS-------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch-------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 999765421 135677888899999999999865
No 478
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.01 E-value=0.0041 Score=58.64 Aligned_cols=90 Identities=16% Similarity=0.099 Sum_probs=54.3
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc----cccc---hhcccccCCCCCCCccchhhcccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR----GLIG---TVHDWCESFSTYPRTYDLLHAWKV 470 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r----gl~g---~~~~~ce~~~typrtydl~h~~~~ 470 (555)
.+|+|++||.|.+++.|... |- -+|+-++.. ..+...-++ |+-. ...|..+.+. -+.+||+|.+...
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGED--GLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAA 155 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSB
T ss_pred CEEEEECCCccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCc
Confidence 48999999999999888642 10 134444432 344433332 3211 1223333322 1358999998877
Q ss_pred ccccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 471 FSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 471 ~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
+..+. -++-|+|||||.+++--.
T Consensus 156 ~~~~~----------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 156 GPKIP----------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp BSSCC----------HHHHHTEEEEEEEEEEES
T ss_pred hHHHH----------HHHHHHcCCCcEEEEEEC
Confidence 76321 378899999999998643
No 479
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=94.99 E-value=0.017 Score=57.09 Aligned_cols=109 Identities=13% Similarity=0.100 Sum_probs=68.2
Q ss_pred cceeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc-----cc--c-chhcccccCCCCCCCccchhhc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR-----GL--I-GTVHDWCESFSTYPRTYDLLHA 467 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r-----gl--~-g~~~~~ce~~~typrtydl~h~ 467 (555)
.-.+|+|++||.|+++..|... |.. .|+-++.. ..+..+-++ |+ + -+..|..+.++ +.+||+|-+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi~ 185 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKG--TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVIA 185 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSS--EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEEE
Confidence 3458999999999999888653 221 34445542 444443333 42 1 12234444333 358999875
Q ss_pred cccccccccCCCChhhhhhhhcccccCCceEEEecchh-HHHHHHHHHhhcCcc
Q 008748 468 WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS-IINYIRKFITALKWD 520 (555)
Q Consensus 468 ~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~-~~~~~~~~~~~~~w~ 520 (555)
+ . -....+|-++-|+|+|||.+++-+... -..++.+.+....|.
T Consensus 186 ~-----~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 186 D-----I----PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp C-----C----SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred c-----C----cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 2 1 124678999999999999999876543 556666666655554
No 480
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=94.96 E-value=0.0081 Score=59.75 Aligned_cols=110 Identities=12% Similarity=0.061 Sum_probs=63.1
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHH----hhccccc--hhcccccCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKII----YDRGLIG--TVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i----~~rgl~g--~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
.+|+|++||.|+|+..|... + .-.|+-++.. .-+... -..|+-. +++.=.+.++ .+.+||+|-.+...
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~--~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSK--PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-LKDVADRVIMGYVH- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTC--CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-CTTCEEEEEECCCS-
T ss_pred CEEEEecCcCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-ccCCceEEEECCcc-
Confidence 47999999999998887643 1 0123333322 222221 1123211 2221122222 25689998655432
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecchh------HHHH-HHHHHhhcCccc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS------IINY-IRKFITALKWDG 521 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~------~~~~-~~~~~~~~~w~~ 521 (555)
....++.++-|.|+|||.+++.+... .+.+ ++.+...+.+++
T Consensus 197 -------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 197 -------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKL 245 (272)
T ss_dssp -------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEE
T ss_pred -------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCee
Confidence 46778999999999999999886543 3444 444444454544
No 481
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=94.87 E-value=0.019 Score=59.45 Aligned_cols=99 Identities=13% Similarity=0.148 Sum_probs=61.1
Q ss_pred CCcceeEeeccCCcchhhhhccCC-CceEEEecccCCCCchhHHhhc-cccchhcccccCCCCCCCccchhhcccccccc
Q 008748 397 KNTFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMSARLKIIYDR-GLIGTVHDWCESFSTYPRTYDLLHAWKVFSEI 474 (555)
Q Consensus 397 ~~~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~~~l~~i~~r-gl~g~~~~~ce~~~typrtydl~h~~~~~s~~ 474 (555)
......|+|++||.|.++.+|.+. |-. .++-.+-+..+...-++ ++-=+-+|.-++ +|.. |++.+.+++-.+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~---~p~~-D~v~~~~vlh~~ 272 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTI--KGVNFDLPHVISEAPQFPGVTHVGGDMFKE---VPSG-DTILMKWILHDW 272 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGGS
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCC--eEEEecCHHHHHhhhhcCCeEEEeCCcCCC---CCCC-CEEEehHHhccC
Confidence 456789999999999999999642 221 11112211111111111 222233555554 4444 999988888644
Q ss_pred ccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 475 EERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 475 ~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
... ....+|-++=|.|+|||.++|-|.
T Consensus 273 ~d~--~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 273 SDQ--HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp CHH--HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CHH--HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 321 246789999999999999998653
No 482
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.81 E-value=0.025 Score=64.90 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=64.3
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----------ccc--cchhcccccCCCCCCCccchhh
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----------RGL--IGTVHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----------rgl--~g~~~~~ce~~~typrtydl~h 466 (555)
-..|+|++||.|.++.+|...---.-.|+-+|-. .-|...-+ .|+ |-.++.=-+.++....+||+|.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 3579999999999999998653111245555543 44444332 244 2233333334555568999999
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
+..+|..+... ....++-||-|+|||| .+||.
T Consensus 802 ~~eVLeHL~dp--~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 802 CLEVIEHMEED--QACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHTTCCS-EEEEE
T ss_pred EeCchhhCChH--HHHHHHHHHHHHcCCC-EEEEE
Confidence 99998865421 1345788999999999 77765
No 483
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=94.76 E-value=0.017 Score=55.50 Aligned_cols=133 Identities=14% Similarity=0.206 Sum_probs=67.3
Q ss_pred eeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc-----cccchhcccccC--CCCCCCccchhhccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR-----GLIGTVHDWCES--FSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r-----gl~g~~~~~ce~--~~typrtydl~h~~~~~ 471 (555)
.+|+|++||.|.++..|.+. +- -.|+-++-. ..+...-++ .+.-+..|..++ +..++.+||+|-.+ +
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~--~ 151 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADK--GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED--V 151 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC--C
T ss_pred CEEEEEcccCCHHHHHHHHHcCC--cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe--c
Confidence 47999999999999888643 21 123333322 222211111 111112233221 01234679987511 1
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEE----ecch------h-HHHHHHHHHhhcCccceecccccccccCCCCCceE
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVII----RDKS------S-IINYIRKFITALKWDGWLSEVEPRIDALSSSEERV 540 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~----rd~~------~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 540 (555)
. .. =....++-++-|+|+|||.+++ +... . .-..++ ++....++.. ...+ -++. ..+.-+
T Consensus 152 ~---~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~-~~~~--~~~~-~~~~~~ 222 (230)
T 1fbn_A 152 A---QP-NQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIV-DEVD--IEPF-EKDHVM 222 (230)
T ss_dssp C---ST-THHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEE-EEEE--CTTT-STTEEE
T ss_pred C---Ch-hHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEE-EEEc--cCCC-ccceEE
Confidence 1 10 1135678999999999999999 2211 1 125566 5555555542 1111 1121 123567
Q ss_pred EEEEec
Q 008748 541 LIAKKK 546 (555)
Q Consensus 541 l~~~k~ 546 (555)
++++|+
T Consensus 223 v~~~k~ 228 (230)
T 1fbn_A 223 FVGIWE 228 (230)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 788774
No 484
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.70 E-value=0.0087 Score=57.21 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=52.7
Q ss_pred eeEeeccCCcchhhhhccCC-Cc----eEEEecccCCC-CchhHHhhc----c--------ccchhcccccCCCCCCCcc
Q 008748 401 RNVMDMNSNLGGFAAALKDK-DV----WVMNVAPVRMS-ARLKIIYDR----G--------LIGTVHDWCESFSTYPRTY 462 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~-~~----wvmnv~p~~~~-~~l~~i~~r----g--------l~g~~~~~ce~~~typrty 462 (555)
..|+|++||.|.+++.|... +. +--.|+-++-. .-+...-++ | +-=+..|..+.++. ..+|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCc
Confidence 37999999999999988652 10 00023333322 223222211 2 11122344333322 2589
Q ss_pred chhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 463 DLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 463 dl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
|+|++...+. .++-++-|+|+|||.+++--
T Consensus 165 D~I~~~~~~~----------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 165 NAIHVGAAAP----------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEEECSCBS----------SCCHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCchH----------HHHHHHHHHhcCCCEEEEEE
Confidence 9999776554 24467889999999999863
No 485
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=94.66 E-value=0.017 Score=52.73 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=43.5
Q ss_pred CCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEecchh----------HHHHHHHHHhhcCc
Q 008748 459 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDKSS----------IINYIRKFITALKW 519 (555)
Q Consensus 459 prtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~~~----------~~~~~~~~~~~~~w 519 (555)
+.+||+|.+..++..+. -+...+|-|+-|+|||||.+++.+... ..+++.+.+..-.+
T Consensus 61 ~~~fD~V~~~~~l~~~~---~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTT---LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp SSCEEEEEECCSTTCCC---CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCCEeEEEECChhhhcc---cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 57999999988776431 246899999999999999999964321 15677777776555
No 486
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=94.65 E-value=0.0059 Score=58.14 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=53.0
Q ss_pred eeEeeccCCcchhhhhccCC------CceEEEecccCCC-CchhHHhh----ccc-------cc-hhcccccCCC---CC
Q 008748 401 RNVMDMNSNLGGFAAALKDK------DVWVMNVAPVRMS-ARLKIIYD----RGL-------IG-TVHDWCESFS---TY 458 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~------~~wvmnv~p~~~~-~~l~~i~~----rgl-------~g-~~~~~ce~~~---ty 458 (555)
.+|+|++||.|.+++.|... |-. +|+-++.. .-+...-+ .|+ +- +..|..+.+. .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNS--YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTC--EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCC--EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 48999999999999888642 111 33334432 33333222 231 11 1123333210 11
Q ss_pred CCccchhhccccccccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 459 PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 459 prtydl~h~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
+.+||+|+++..+. .++-++-++|+|||.+++--
T Consensus 160 ~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS----------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 35799998776654 24577889999999999763
No 487
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=94.64 E-value=0.0058 Score=62.81 Aligned_cols=94 Identities=16% Similarity=0.209 Sum_probs=60.3
Q ss_pred CcceeEeeccCCcchhhhhccCC-C---ceEEEecccCCCCchhHHhh-ccccchhcccccCCCCCCCccchhhcccccc
Q 008748 398 NTFRNVMDMNSNLGGFAAALKDK-D---VWVMNVAPVRMSARLKIIYD-RGLIGTVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 398 ~~~rn~~dm~~~~g~faa~l~~~-~---~wvmnv~p~~~~~~l~~i~~-rgl~g~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
.....|+|++||.|.++.+|.+. | +-+.-. | ..+...-+ .++-=+-+|..++ .|. ||++.+.++|.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~---~p~-~D~v~~~~~lh 257 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFTS---IPN-ADAVLLKYILH 257 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTTC---CCC-CSEEEEESCGG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccCC---CCC-ccEEEeehhhc
Confidence 35579999999999999999743 3 333322 2 11111111 1222233455443 454 99999999887
Q ss_pred ccccCCCChhhhhhhhcccccC---CceEEEec
Q 008748 473 EIEERGCSFEDLLIEMDRMLRP---EGFVIIRD 502 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp---~g~~i~rd 502 (555)
.+... ....+|-++-|+|+| ||.++|-|
T Consensus 258 ~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 258 NWTDK--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp GSCHH--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred cCCHH--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 54322 134899999999999 99999864
No 488
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.61 E-value=0.018 Score=58.81 Aligned_cols=143 Identities=14% Similarity=0.156 Sum_probs=75.9
Q ss_pred ceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhhc------cc----cc-hhcccccCCCCCCCccchhh
Q 008748 400 FRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYDR------GL----IG-TVHDWCESFSTYPRTYDLLH 466 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~r------gl----~g-~~~~~ce~~~typrtydl~h 466 (555)
-++|+|++||.|+++.+|... +.. .|+-++-. .-+.+.-++ |+ +- +..|..+.....+.+||+|-
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVE--NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCC--EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 368999999999999999876 433 34444432 333332221 11 11 12233322222357899998
Q ss_pred cccccccccc-CCCChhhhhhhhcccccCCceEEEec-----chhHHHHHHHHHhhcCccceecccccccccCCCCCceE
Q 008748 467 AWKVFSEIEE-RGCSFEDLLIEMDRMLRPEGFVIIRD-----KSSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERV 540 (555)
Q Consensus 467 ~~~~~s~~~~-~~c~~~~~~~e~drilrp~g~~i~rd-----~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 540 (555)
++. +..... ...--..++-++-|+|+|||.+++.- ..+.+.++.+.++..--.+......-.. +..+.-.+
T Consensus 195 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~--~~~g~w~f 271 (321)
T 2pt6_A 195 VDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPT--YPCGCIGI 271 (321)
T ss_dssp EEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTT--SGGGEEEE
T ss_pred ECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEecc--ccCceEEE
Confidence 764 221110 00111577889999999999999953 2244555555555443333221110001 11123457
Q ss_pred EEEEecc
Q 008748 541 LIAKKKL 547 (555)
Q Consensus 541 l~~~k~~ 547 (555)
++|.|++
T Consensus 272 ~~as~~~ 278 (321)
T 2pt6_A 272 LCCSKTD 278 (321)
T ss_dssp EEEESST
T ss_pred EEeeCCC
Confidence 8888864
No 489
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=94.54 E-value=0.012 Score=55.55 Aligned_cols=97 Identities=9% Similarity=0.102 Sum_probs=58.1
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHh----hccc--cchh-cccccCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIY----DRGL--IGTV-HDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~----~rgl--~g~~-~~~ce~~~typrtydl~h~~~~~s 472 (555)
.+|+|++||.|.++..+..... -.|+-++.. .-+.+.- ..|+ +-++ .|..+..+.-+.+||+|=++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 4799999999999886543321 156666643 4444332 2333 2122 233332233346899998776654
Q ss_pred ccccCCCChhhhhhhh--cccccCCceEEEecch
Q 008748 473 EIEERGCSFEDLLIEM--DRMLRPEGFVIIRDKS 504 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~--drilrp~g~~i~rd~~ 504 (555)
. -....++-++ -|+|+|||.+++....
T Consensus 134 ~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 R-----GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp T-----TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-----CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 1245566666 4579999999987654
No 490
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=94.40 E-value=0.032 Score=55.04 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=68.8
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCC-CCchhHHhhc----cc----cchhcccccCCCCCCCccchhhccc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRM-SARLKIIYDR----GL----IGTVHDWCESFSTYPRTYDLLHAWK 469 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~-~~~l~~i~~r----gl----~g~~~~~ce~~~typrtydl~h~~~ 469 (555)
.+|+|++||.|.++.+|... |- .+|+-++. +..+.+.-++ |+ --+..|..+.++ +.+||+|-++-
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~V~~~~ 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD--EKDVDALFLDV 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--CCSEEEEEECC
T ss_pred CEEEEECCcCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc--CCccCEEEECC
Confidence 47999999999999888643 22 24555554 3455544333 43 112345555433 25799886421
Q ss_pred cccccccCCCChhhhhhhhcccccCCceEEEecc-hhHHHHHHHHHhhcCcc
Q 008748 470 VFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-SSIINYIRKFITALKWD 520 (555)
Q Consensus 470 ~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~-~~~~~~~~~~~~~~~w~ 520 (555)
-....++-++-|+|+|||.+++-+. .+-+.++.+.+....|.
T Consensus 190 ---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 190 ---------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp ---------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred ---------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 1245788899999999999998765 34566777776666554
No 491
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.36 E-value=0.013 Score=59.68 Aligned_cols=143 Identities=10% Similarity=0.032 Sum_probs=75.5
Q ss_pred cceeEeeccCCcchhhhhccCC-CceEEEecccCCC-CchhHHhh------cc-c----cc-hhcccccCCCCCCCccch
Q 008748 399 TFRNVMDMNSNLGGFAAALKDK-DVWVMNVAPVRMS-ARLKIIYD------RG-L----IG-TVHDWCESFSTYPRTYDL 464 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~-~~wvmnv~p~~~~-~~l~~i~~------rg-l----~g-~~~~~ce~~~typrtydl 464 (555)
.-++|+|++||.|+++..|... ++ .+|+=++-. .-+.+.-+ .| + +- +..|-.+-...-+.+||+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 3478999999999999999876 33 234434332 22222111 11 1 11 111221111122578999
Q ss_pred hhcccccccc---c-cCCCChhhhhhhhcccccCCceEEEec------chhHHHHHHHHHhhcCccceecccccccccCC
Q 008748 465 LHAWKVFSEI---E-ERGCSFEDLLIEMDRMLRPEGFVIIRD------KSSIINYIRKFITALKWDGWLSEVEPRIDALS 534 (555)
Q Consensus 465 ~h~~~~~s~~---~-~~~c~~~~~~~e~drilrp~g~~i~rd------~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 534 (555)
|-++.... . . ...--...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+..... .-|..
T Consensus 155 Ii~d~~~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~---~vP~~ 230 (314)
T 1uir_A 155 VIIDLTDP-VGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKN---HIPGF 230 (314)
T ss_dssp EEEECCCC-BSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEE---EEGGG
T ss_pred EEECCCCc-ccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEE---ecCCC
Confidence 99875432 2 0 000013577889999999999999862 234455555555554333321110 00111
Q ss_pred CCCceEEEEEecc
Q 008748 535 SSEERVLIAKKKL 547 (555)
Q Consensus 535 ~~~~~~l~~~k~~ 547 (555)
.+...+++|.|++
T Consensus 231 ~g~~~~~~as~~~ 243 (314)
T 1uir_A 231 FLNFGFLLASDAF 243 (314)
T ss_dssp TEEEEEEEEESSS
T ss_pred CCeEEEEEEECCC
Confidence 2345688898873
No 492
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.31 E-value=0.073 Score=53.51 Aligned_cols=42 Identities=19% Similarity=0.117 Sum_probs=33.1
Q ss_pred CCEEEEECCCCcHHHHHHhc--CCCccccCChhhhhHHHHHHHH
Q 008748 156 IRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFAL 197 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~--~~V~~vdis~~dls~a~i~~A~ 197 (555)
...|||++||+|..+..++. +.++++|+++..+..+..+...
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 35899999999999888775 4789999999887666654433
No 493
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=94.25 E-value=0.042 Score=53.93 Aligned_cols=108 Identities=15% Similarity=0.141 Sum_probs=65.1
Q ss_pred eeEeeccCCcchhhhhccCC--CceEEEecccCCC-CchhHHhhc-----c-ccc----hhcccccCCCCCCCccchhhc
Q 008748 401 RNVMDMNSNLGGFAAALKDK--DVWVMNVAPVRMS-ARLKIIYDR-----G-LIG----TVHDWCESFSTYPRTYDLLHA 467 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~--~~wvmnv~p~~~~-~~l~~i~~r-----g-l~g----~~~~~ce~~~typrtydl~h~ 467 (555)
.+|+|++||.|.++.+|... |- .+|+-++-. ..+...-++ | +.. +..|..+. +.-+.+||+|-+
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~D~v~~ 177 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSVDRAVL 177 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCEEEEEE
T ss_pred CEEEEEcccccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCceeEEEE
Confidence 37999999999999988653 21 145555543 444443332 3 211 22344443 211468998875
Q ss_pred cccccccccCCCChhhhhhhhcccccCCceEEEec-chhHHHHHHHHHhh-cCcc
Q 008748 468 WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRD-KSSIINYIRKFITA-LKWD 520 (555)
Q Consensus 468 ~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd-~~~~~~~~~~~~~~-~~w~ 520 (555)
+. -....++-++-|+|+|||.+++-. ..+.+.++...+.. ..|.
T Consensus 178 ~~---------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 178 DM---------LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp ES---------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred CC---------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 21 135578999999999999999854 34445555555544 5554
No 494
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=94.24 E-value=0.011 Score=58.83 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=58.2
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCC-C-CchhHHhh---------ccc-------cc-hhcccccCCCCC---
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-S-ARLKIIYD---------RGL-------IG-TVHDWCESFSTY--- 458 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~-~~l~~i~~---------rgl-------~g-~~~~~ce~~~ty--- 458 (555)
.+|+|++||.|.++.+|..... -.|+-++- . ..|.++-+ .|+ +- ...+|.+.....
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 4799999999999887765432 14555554 2 33433222 222 21 225677654322
Q ss_pred --CCccchhhccccccccccCCCChhhhhhhhccccc---C--CceEEE
Q 008748 459 --PRTYDLLHAWKVFSEIEERGCSFEDLLIEMDRMLR---P--EGFVII 500 (555)
Q Consensus 459 --prtydl~h~~~~~s~~~~~~c~~~~~~~e~drilr---p--~g~~i~ 500 (555)
+.+||+|-+..++-.. -....++-++.|+|+ | ||.+++
T Consensus 159 ~~~~~fD~Ii~~dvl~~~----~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH----QAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HSCSSBSEEEEESCCSCG----GGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred ccCCCCCEEEEeCcccCh----HHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 4689999876655421 236789999999999 9 996543
No 495
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=94.22 E-value=0.049 Score=54.03 Aligned_cols=130 Identities=15% Similarity=0.062 Sum_probs=68.7
Q ss_pred cceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh------ccc----cchhcccccCCCCCCCccchhhc
Q 008748 399 TFRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD------RGL----IGTVHDWCESFSTYPRTYDLLHA 467 (555)
Q Consensus 399 ~~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~------rgl----~g~~~~~ce~~~typrtydl~h~ 467 (555)
.-++|+|++||.|+++.++...+ -.|+=++-. .-+.+.-+ .|+ +-+.+.=...| +.+||+|=+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~---~~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD---IKKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC---CCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH---HhhCCEEEE
Confidence 34789999999999999887664 345444432 11111111 011 11111111122 278999976
Q ss_pred cccccccccCCCChhhhhhhhcccccCCceEEEecc-----hhHHHHHHHHHhhcCccceecccccccccCCCCCceEEE
Q 008748 468 WKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIRDK-----SSIINYIRKFITALKWDGWLSEVEPRIDALSSSEERVLI 542 (555)
Q Consensus 468 ~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~rd~-----~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~ 542 (555)
+. + . -...+-++-|.|+|||.+++... .+.+..+.+.++..--.+. .....-|. .+...+++
T Consensus 146 d~--~---d----p~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~---~~~~~vP~-~g~~~~~~ 212 (262)
T 2cmg_A 146 LQ--E---P----DIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAM---PFVAPLRI-LSNKGYIY 212 (262)
T ss_dssp SS--C---C----CHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEE---EECCTTCT-TCCEEEEE
T ss_pred CC--C---C----hHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceE---EEEEccCC-CcccEEEE
Confidence 62 1 1 12367799999999999998621 1233344433333311221 11111222 23456788
Q ss_pred EEecc
Q 008748 543 AKKKL 547 (555)
Q Consensus 543 ~~k~~ 547 (555)
|.|++
T Consensus 213 as~~~ 217 (262)
T 2cmg_A 213 ASFKT 217 (262)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 88863
No 496
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=94.20 E-value=0.0086 Score=57.64 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=52.2
Q ss_pred ceeEeeccCCcchhhhhccCCCceEEEecccCCC-CchhHHhh----ccccc---hhcccccCCCCCCCccchhhccccc
Q 008748 400 FRNVMDMNSNLGGFAAALKDKDVWVMNVAPVRMS-ARLKIIYD----RGLIG---TVHDWCESFSTYPRTYDLLHAWKVF 471 (555)
Q Consensus 400 ~rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~~-~~l~~i~~----rgl~g---~~~~~ce~~~typrtydl~h~~~~~ 471 (555)
-.+|+|++||.|.+++.|...-- .+|+-++.. ..+...-+ .|+-. ...|....++. ...||+|.++..+
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIVTAGA 168 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEECSBB
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCCccEEEECCcH
Confidence 34899999999999998865310 234444432 33333222 23311 11233223321 1249999877765
Q ss_pred cccccCCCChhhhhhhhcccccCCceEEEec
Q 008748 472 SEIEERGCSFEDLLIEMDRMLRPEGFVIIRD 502 (555)
Q Consensus 472 s~~~~~~c~~~~~~~e~drilrp~g~~i~rd 502 (555)
.. +.-++-|+|+|||.+++--
T Consensus 169 ~~----------~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 169 PK----------IPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp SS----------CCHHHHHTEEEEEEEEEEE
T ss_pred HH----------HHHHHHHhcCCCcEEEEEE
Confidence 52 2237789999999999864
No 497
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=94.19 E-value=0.035 Score=55.91 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=29.2
Q ss_pred CCEEEEECCCCcHHHHHHhcC--CCccccCChhhhhHH
Q 008748 156 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHEN 191 (555)
Q Consensus 156 ~~~VLDIGCGtG~~a~~La~~--~V~~vdis~~dls~a 191 (555)
...+||.+||.|..+..|+++ .|+|+|.++..+..+
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A 60 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARA 60 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 358999999999999999975 688888877766433
No 498
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=94.15 E-value=0.015 Score=56.58 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=30.8
Q ss_pred CccchhhccccccccccC-----CCChhhhhhhhcccccCCceEEEecch
Q 008748 460 RTYDLLHAWKVFSEIEER-----GCSFEDLLIEMDRMLRPEGFVIIRDKS 504 (555)
Q Consensus 460 rtydl~h~~~~~s~~~~~-----~c~~~~~~~e~drilrp~g~~i~rd~~ 504 (555)
.+||+|-++..|...... .-....++-++-|+|+|||++++-+..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 489999887665421110 012347888999999999999986543
No 499
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.14 E-value=0.007 Score=61.41 Aligned_cols=92 Identities=17% Similarity=0.077 Sum_probs=55.7
Q ss_pred eeEeeccCCcchhhhhccCCCceEEEecccCC-CCchhHHhhc----cccc---hhcccccCCCCCCCccchhhcccccc
Q 008748 401 RNVMDMNSNLGGFAAALKDKDVWVMNVAPVRM-SARLKIIYDR----GLIG---TVHDWCESFSTYPRTYDLLHAWKVFS 472 (555)
Q Consensus 401 rn~~dm~~~~g~faa~l~~~~~wvmnv~p~~~-~~~l~~i~~r----gl~g---~~~~~ce~~~typrtydl~h~~~~~s 472 (555)
.+|+|++||.|+++..|...-.=--+|+-++- +..+...-++ |+-. ...|..+... -..+||+|.+...+.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVGVD 155 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSBBS
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCCHH
Confidence 48999999999999888643000012444443 2444443333 5422 1223333221 235899999888776
Q ss_pred ccccCCCChhhhhhhhcccccCCceEEEecc
Q 008748 473 EIEERGCSFEDLLIEMDRMLRPEGFVIIRDK 503 (555)
Q Consensus 473 ~~~~~~c~~~~~~~e~drilrp~g~~i~rd~ 503 (555)
.+. -++-|+|+|||.+++...
T Consensus 156 ~~~----------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 156 EVP----------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CCC----------HHHHHHEEEEEEEEEEBC
T ss_pred HHH----------HHHHHhcCCCcEEEEEEC
Confidence 322 367889999999999754
No 500
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=94.12 E-value=0.034 Score=54.46 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=57.7
Q ss_pred cCCCcceeEeeccCCcchhhhhccCC-----CceEEEecccCCCCchhHHhhcc-ccchhcccccC--CCCCCCccchhh
Q 008748 395 AQKNTFRNVMDMNSNLGGFAAALKDK-----DVWVMNVAPVRMSARLKIIYDRG-LIGTVHDWCES--FSTYPRTYDLLH 466 (555)
Q Consensus 395 ~~~~~~rn~~dm~~~~g~faa~l~~~-----~~wvmnv~p~~~~~~l~~i~~rg-l~g~~~~~ce~--~~typrtydl~h 466 (555)
|+.|. .|+|++||.|.|+.+|.+. .|....+-|.-...-....-+++ +.-+..|-+.+ .+.-+-++|++.
T Consensus 75 ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 75 VKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEE
Confidence 55555 7999999999999999642 35555543332111112223343 33333344332 122234677765
Q ss_pred ccccccccccCCCChhhhhhhhcccccCCceEEEe
Q 008748 467 AWKVFSEIEERGCSFEDLLIEMDRMLRPEGFVIIR 501 (555)
Q Consensus 467 ~~~~~s~~~~~~c~~~~~~~e~drilrp~g~~i~r 501 (555)
++-.+. =....++-|+-|+|+|||.++|-
T Consensus 153 ~d~~~~------~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 153 ADVAQP------EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp ECCCCT------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeccCC------hhHHHHHHHHHHhccCCCEEEEE
Confidence 432221 12456888999999999999985
Done!