RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 008755
(554 letters)
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase
subunit A {Thermotoga maritima [TaxId: 2336]}
Length = 475
Score = 176 bits (448), Expect = 7e-50
Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 27/399 (6%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
G+ A+ D G T + + +TVV + E G +GK +DEF
Sbjct: 57 KFWGIPVAIKDNILTLGMRTTCASRILE--NYESVFDATVVKKMKEAGFVVVGKANLDEF 114
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
A + + NP ++PGGSS G+A AV+A +V +LG DT G VR P++ CG
Sbjct: 115 AMGSSTERSAFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCG 174
Query: 177 ILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK-ILRHVGHVLLQLPFAAQRSPRQIII 235
++G++P+YG VS G++ ++SLD +G + + + + + A R++
Sbjct: 175 VVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAILMEIISGRDENDATTVNRKVDF 234
Query: 236 ADDCFELLKIPADRVVQVVI-----KSTEKLFGRQVLKHENLG-EYFDSKVPSLKGFHKT 289
+ E + V + + + + F + E LG + K+P +K T
Sbjct: 235 LSEIEEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSVAT 294
Query: 290 -----------NGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML-----E 333
N + ++ R + K ++++ ++ I
Sbjct: 295 YYVIAPAEASSNLARFDGVKYGLRIKEKGLREMYMKTRNVGFGEEVRRRIMIGTFTLSAA 354
Query: 334 ISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLL 393
E +R ++ ++ +L ++TPT+ K+G + Y F+
Sbjct: 355 YYEAYFNKAMKVRRKISDELNEVLSQYDAILTPTSPVTAFKIGEIKDPLTYYLMDIFT-- 412
Query: 394 SIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
A+++G ++VP G+ + P V I R D +
Sbjct: 413 IPANLAGLPAISVPFGFSNNLPVGVQVIGRRFADGKVFR 451
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase
subunit A {Staphylococcus aureus [TaxId: 1280]}
Length = 485
Score = 167 bits (424), Expect = 2e-46
Identities = 85/406 (20%), Positives = 154/406 (37%), Gaps = 30/406 (7%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ L G+ + D G T T + A IGK
Sbjct: 66 QMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLH--KENAVLIGKLN 123
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
+DEFA + ++ NP +PGGSS G+A AVAA LV SLG DT G +R P+
Sbjct: 124 MDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPA 183
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPK----ILRHVGHVLLQLPFAAQR 228
A+CG++G +P+YG VS G++ ++SLD +G R+ K +L + + +A
Sbjct: 184 AYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPV 243
Query: 229 SPRQIIIA-DDCFELLKI--PADRVVQVVIKSTEKLFGRQVLKHENLG-EYFDSKVPSLK 284
+ LK+ P + + + V ++ V ++LG + +P+ K
Sbjct: 244 DDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTK 303
Query: 285 ------------GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEML 332
+ E + + S ++ I
Sbjct: 304 FGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGT 363
Query: 333 -----EISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQN 387
+ + + +R +++ + ++ ++V PT LG E + +
Sbjct: 364 FALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLG--EEIDDPLTM 421
Query: 388 RAFSLL-SIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
A LL + +++G ++VP G + P + FI + ++ L
Sbjct: 422 YANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYR 467
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas
maltophilia [TaxId: 40324]}
Length = 490
Score = 114 bits (286), Expect = 6e-28
Identities = 96/413 (23%), Positives = 151/413 (36%), Gaps = 43/413 (10%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+ PL G+ + D + T G + +V L + GA +GKT
Sbjct: 69 RLRGPLHGIPLLLKDNINAAPMATSAGSLAL---QGFRPDDAYLVRRLRDAGAVVLGKTN 125
Query: 113 VDEFA-----YSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGG 167
+ E+A SI+G + NP S P GSSSG+AVAVAA+L ++G +T G
Sbjct: 126 LSEWANFRGNDSISGWSARGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTETDGS 185
Query: 168 VRVPSAFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVL-LQLPFAA 226
+ P+A G++G +P+ G VS GIIPIS S DT G AR V + +
Sbjct: 186 IVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPMARSVADAAAVLTAIAGRDDADP 245
Query: 227 QRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV--LKHENLGEYFDSKVPSLK 284
+ D L R ++ + T L R + L + E + +
Sbjct: 246 ATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLLKYRGMPPLIEQAATELRRAGAVVVP 305
Query: 285 GFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPAL-----------------------D 321
G R + YEFK + + + L +
Sbjct: 306 VELPNQGAWAEAERTLLLYEFKAGLERYFNTHRAPLRSLADLIAFNQAHSKQELGLFGQE 365
Query: 322 PDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGI--LVTPTTAYPPPKLGGKE 379
+ A+ L + + R I + L + LV PTT P +
Sbjct: 366 LLVEADATAGLADPAYIRARSDARRLAGPEGIDAALAAHQLDALVAPTTGVAWPIRSEGD 425
Query: 380 MLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYDKCPTSVSFIARHGGDRFLLD 432
+ S A+V+G +TVP+G D P + F+ + L++
Sbjct: 426 DFPGES-------YSAAAVAGYPSLTVPMGQIDGLPVGLLFMGTAWSEPKLIE 471
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum
[TaxId: 375]}
Length = 412
Score = 99.4 bits (246), Expect = 4e-23
Identities = 84/393 (21%), Positives = 139/393 (35%), Gaps = 32/393 (8%)
Query: 53 KAPHPLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTV 112
+A PL G++ + D+ D T G + + VV L GAT IGKT
Sbjct: 49 QASGPLRGIAVGIKDIIDTANMPTEMGSEIYR--GWQPRSDAPVVMMLKRAGATIIGKTT 106
Query: 113 VDEFAYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPS 172
FA + + PGGSSSG+A AV A ++ +LG T G V P+
Sbjct: 107 TTAFASRDPTATLNPHNTGHS------PGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPA 160
Query: 173 AFCGILGFRPSYGAVSHMGIIPISTSLDTVGWFARDPKILRHVGHVLLQLPFAAQRSPRQ 232
A+CG +PS+ + +G+ S +LDTVG F + L + + P +
Sbjct: 161 AYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGIVPAK 220
Query: 233 IIIADDCFELLKIPADRVVQVVIKSTEKLFGRQVLKHENLGEYFDSKVPSLKGFHKTNGE 292
+ + + +++ K R + + E
Sbjct: 221 APRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASVQA------------IDLPEAVHE 268
Query: 293 LKNVMRLIQRYEFKNNHNEWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSA 352
+ +IQ +E + P + A + + ++ + + I R
Sbjct: 269 AWRIHPIIQDFEAHRALAWEFSEHHDEIAPMLRASLDATVGLTPKEYDEARRIGRRGRRE 328
Query: 353 ISSLLKDDGILVTPTTAYPPPKLGGKEMLSEDYQNRAFSLLSIASVSGCCQVTVPLGYYD 412
+ + + +L+T + P + NR ++L+ G V VP+
Sbjct: 329 LGEVFEGVDVLLTYSAPGTAPAKAL-ASTGDPRYNRLWTLM------GNPCVNVPVLKVG 381
Query: 413 KCPTSVSFIARHGGDRFLLDTVQNMYASLQEQA 445
P V IAR G D L T A E A
Sbjct: 382 GLPIGVQVIARFGNDAHALAT-----AWFLEDA 409
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide
hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 537
Score = 95.5 bits (236), Expect = 2e-21
Identities = 75/438 (17%), Positives = 130/438 (29%), Gaps = 71/438 (16%)
Query: 57 PLTGLSFAVSDLFDIEGYVTGFGHPEWARTHSAASRTSTVVSTLVEGGATCIGKTVVDEF 116
L G+ ++ + F +G+ + G + VV L GA T V +
Sbjct: 97 LLYGVPVSLKECFSYKGHDSTLGLS--LNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQS 154
Query: 117 AYSINGTNKHYDTPTNPAAPSQMPGGSSSGAAVAVAADLVDFSLGIDTVGGVRVPSAFCG 176
S + +N + NP S+ PGGSS G + + LG D G +R PSAFCG
Sbjct: 155 MLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCG 214
Query: 177 ILGFRPSYGAVSHMGIIPI----STSLDTVGWFARDPKILRHVGHVL------------- 219
I G +P+ +S G+ + ++G ARD + L L
Sbjct: 215 ICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVP 274
Query: 220 ----LQLPFAAQRSPRQIIIADDCFELLKIPADRVVQVVIKSTEKLFGRQV--------- 266
+ + + R R D + + R + + E +
Sbjct: 275 PLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPY 334
Query: 267 -LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFKNNHNEWIESVKPALDPDIS 325
L+ + G F S K + + LI + + + L P ++
Sbjct: 335 ALEVLSAGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLA 394
Query: 326 AEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGI--LVTPTTAYPPPKLGGKEMLSE 383
A + M S + + R ++ + K + L+TP
Sbjct: 395 AFLNSMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRA--- 451
Query: 384 DYQNRAFSLLSIASVSGCCQVTVPLGYYDKC----------------------------- 414
A S + + VP+
Sbjct: 452 ---TGAISYTVLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKKAMKNSVG 508
Query: 415 -PTSVSFIARHGGDRFLL 431
P +V +A + L
Sbjct: 509 LPVAVQCVALPWQEELCL 526
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 78.1 bits (191), Expect = 3e-17
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 463 SAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCT 522
SA+ KE+GN+ + +++ +A + Y AI N A YY+NRA YL+ QA ADC
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCR 62
Query: 523 KAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
+A+ LD ++VKA+ G + + Y EAI
Sbjct: 63 RALELDGQSVKAHFFLGQCQLEMESYDEAIA 93
Score = 43.8 bits (102), Expect = 2e-05
Identities = 11/83 (13%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
G + + + +AI+ A L + + + L A+ +I +
Sbjct: 79 GQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR-----IAKKKRWNSIEERRI 133
Query: 531 NVKAYLRRGTAREMLGYYKEAIE 553
+ ++ L R + + +E
Sbjct: 134 HQESELHSYLTRLIAAERERELE 156
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 66.8 bits (162), Expect = 4e-14
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 521
+ A KE GN AYK K + A+ Y +A +L+ N TY +N+AA Y E G + + C
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 522 TKAINLDKKNV-------KAYLRRGTAREMLGYYKEAIE 553
KAI + ++N KAY R G + YK+AI
Sbjct: 62 EKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIH 100
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 71.2 bits (173), Expect = 6e-14
Identities = 11/80 (13%), Positives = 27/80 (33%)
Query: 469 EKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLD 528
E ++ Y+ + A + + +N ++ + + ++ T AI +
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN 63
Query: 529 KKNVKAYLRRGTAREMLGYY 548
+AY G + G
Sbjct: 64 PLLAEAYSNLGNVYKERGQL 83
Score = 67.0 bits (162), Expect = 1e-12
Identities = 15/76 (19%), Positives = 30/76 (39%)
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
N + +A+ Y +A+++ A +SN A+ + G +A +AI +
Sbjct: 312 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371
Query: 531 NVKAYLRRGTAREMLG 546
AY G + +
Sbjct: 372 FADAYSNMGNTLKEMQ 387
Score = 61.2 bits (147), Expect = 1e-10
Identities = 23/94 (24%), Positives = 37/94 (39%)
Query: 460 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 519
+ GN + + + +A++ Y A+ L+ N+A + N A Y E G A
Sbjct: 199 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID 258
Query: 520 DCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
+AI L AY A + G EA +
Sbjct: 259 TYRRAIELQPHFPDAYCNLANALKEKGSVAEAED 292
Score = 59.3 bits (142), Expect = 4e-10
Identities = 22/90 (24%), Positives = 33/90 (36%)
Query: 464 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTK 523
A + Y+ AI Y AI+L + Y N A A E GS +AE
Sbjct: 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNT 296
Query: 524 AINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
A+ L + + + G +EA+
Sbjct: 297 ALRLCPTHADSLNNLANIKREQGNIEEAVR 326
Score = 57.4 bits (137), Expect = 2e-09
Identities = 18/94 (19%), Positives = 35/94 (37%)
Query: 460 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 519
Q + N + +A Y A++L +A +N A E G+ +A
Sbjct: 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 326
Query: 520 DCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
KA+ + + A+ + + G +EA+
Sbjct: 327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 360
Score = 48.9 bits (115), Expect = 8e-07
Identities = 19/82 (23%), Positives = 32/82 (39%)
Query: 472 NQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKN 531
N + +A + Y +AI+ N A +SN + G A KA+ LD
Sbjct: 143 NLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNF 202
Query: 532 VKAYLRRGTAREMLGYYKEAIE 553
+ AY+ G + + A+
Sbjct: 203 LDAYINLGNVLKEARIFDRAVA 224
Score = 46.6 bits (109), Expect = 5e-06
Identities = 8/51 (15%), Positives = 14/51 (27%)
Query: 503 NRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
A ++G F AE C + + N L + +
Sbjct: 4 ELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAH 54
Score = 40.0 bits (92), Expect = 6e-04
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 14/103 (13%)
Query: 458 FNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFL-- 515
Q A G + AI + +A+ L+ N AY+ G+ L
Sbjct: 163 ETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD-------AYINLGNVLKE 215
Query: 516 -----QAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
+A A +A++L + + G AI+
Sbjct: 216 ARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID 258
Score = 39.7 bits (91), Expect = 7e-04
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESG 512
+ A + + + +A+ Y EAI+++ A YSN E
Sbjct: 337 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 38.9 bits (89), Expect = 0.001
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 460 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYL 509
+ + + + ++ ++ ++ F T AIK N A YSN Y
Sbjct: 29 EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK 78
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 59.1 bits (141), Expect = 4e-10
Identities = 8/67 (11%), Positives = 24/67 (35%)
Query: 459 NQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAE 518
N + E+G + ++ A+ + A++ + + + E+ L A
Sbjct: 14 NPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAI 73
Query: 519 ADCTKAI 525
+ + +
Sbjct: 74 SALRRCL 80
Score = 49.8 bits (117), Expect = 3e-07
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Query: 485 SFYTEAIKLNGNN----ATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGT 540
+ Y + + N L+ G A A+ D K+++A+ GT
Sbjct: 2 ATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGT 61
Query: 541 AREMLGYYKEAIE 553
+ AI
Sbjct: 62 TQAENEQELLAIS 74
Score = 32.9 bits (73), Expect = 0.085
Identities = 17/83 (20%), Positives = 36/83 (43%)
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
G ++ KA+ +T A+ + N+ ++ A +A A +A+ L
Sbjct: 179 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPG 238
Query: 531 NVKAYLRRGTAREMLGYYKEAIE 553
+++ G + LG ++EA+E
Sbjct: 239 YIRSRYNLGISCINLGAHREAVE 261
Score = 31.3 bits (69), Expect = 0.25
Identities = 6/41 (14%), Positives = 12/41 (29%)
Query: 475 YKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFL 515
+A+ + EA+ + + A S L
Sbjct: 251 INLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTL 291
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 55.4 bits (132), Expect = 8e-10
Identities = 39/92 (42%), Positives = 56/92 (60%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 521
+ AE K + N +K K + AI FY++AI+LN +NA YY NR+ AYL + + A D
Sbjct: 8 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDA 67
Query: 522 TKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
T+AI LDKK +K Y RR + LG ++ A+
Sbjct: 68 TRAIELDKKYIKGYYRRAASNMALGKFRAALR 99
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 54.6 bits (130), Expect = 2e-09
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKL---------------NGNNATYYSNRAA 506
+ A I KEKG +K ++++A+ Y + + + N A
Sbjct: 13 EQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAM 72
Query: 507 AYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
YL+ + +A C KA+ LD N K RRG A+ ++ ++ A
Sbjct: 73 CYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKG 119
Score = 34.9 bits (79), Expect = 0.012
Identities = 3/42 (7%), Positives = 14/42 (33%)
Query: 478 KQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 519
++ A + + +++N N ++ + +
Sbjct: 112 NEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHNERDR 153
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 55.8 bits (134), Expect = 3e-09
Identities = 16/84 (19%), Positives = 33/84 (39%)
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
A + Q +A+ EAIK + +A+ S+ G F +A+ ++I L +
Sbjct: 3 WKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE 62
Query: 531 NVKAYLRRGTAREMLGYYKEAIEG 554
+ + + K+ +G
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQG 86
Score = 38.9 bits (90), Expect = 0.001
Identities = 10/50 (20%), Positives = 16/50 (32%)
Query: 504 RAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
+ L G QA +AI K+ + G ++ A E
Sbjct: 2 QWKNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADE 51
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 54.5 bits (130), Expect = 3e-09
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 470 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDK 529
+G A K W A+ ++ ++ N Y + +AE T++IN DK
Sbjct: 11 EGVLAADKKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDK 67
Query: 530 KNVKAYLRRGTAREMLGYYKEAIE 553
AY +RG Y AI+
Sbjct: 68 HLAVAYFQRGMLYYQTEKYDLAIK 91
Score = 41.0 bits (95), Expect = 1e-04
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 16/110 (14%)
Query: 460 QKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEA 519
Q + I G K +A +T +I + + A Y R Y ++ + A
Sbjct: 32 QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIK 91
Query: 520 DCTKAINLDKKN----------------VKAYLRRGTAREMLGYYKEAIE 553
D +A+ + N + +K+A E
Sbjct: 92 DLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEE 141
Score = 36.4 bits (83), Expect = 0.004
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 465 EIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKA 524
++A + +A + + I + ++ N A Y + + +AE A
Sbjct: 87 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALA 146
Query: 525 INLDKKNVKAYLRRGTAREMLGYYKEAIE 553
++ K+ R + + +
Sbjct: 147 TSM-----KSEPRHSKIDKAMECVWKQKL 170
Score = 31.0 bits (69), Expect = 0.28
Identities = 6/48 (12%), Positives = 13/48 (27%)
Query: 470 KGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQA 517
K ++W KA A + ++A + +
Sbjct: 126 IAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEP 173
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 49.2 bits (116), Expect = 6e-07
Identities = 12/85 (14%), Positives = 26/85 (30%)
Query: 469 EKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLD 528
E A+ ++ FY + S L++ + + +
Sbjct: 213 ELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPEN 272
Query: 529 KKNVKAYLRRGTAREMLGYYKEAIE 553
K + + A + L Y KE ++
Sbjct: 273 KWCLLTIILLMRALDPLLYEKETLQ 297
Score = 40.8 bits (94), Expect = 3e-04
Identities = 7/60 (11%), Positives = 18/60 (30%)
Query: 459 NQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAE 518
K + + +++ ++ A Y + + +L S L+ E
Sbjct: 271 ENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKME 330
Score = 35.0 bits (79), Expect = 0.022
Identities = 13/126 (10%), Positives = 37/126 (29%), Gaps = 14/126 (11%)
Query: 438 YASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNN 497
+ +EQA+ + Q + + +++ + + ++ + N +
Sbjct: 7 VKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDES----VLELTSQILGANPDF 62
Query: 498 ATYYSNR----------AAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGY 547
AT ++ R + + + ++ K+ + R L
Sbjct: 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE 122
Query: 548 YKEAIE 553
A E
Sbjct: 123 PNWARE 128
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 48.0 bits (113), Expect = 1e-06
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Query: 476 KDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQ-AEADCTKAINLDKKNVKA 534
+D++ +A +AI+LN N T + R L T I KN +
Sbjct: 55 RDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV 114
Query: 535 YLRRGTAREMLGYYKEA 551
+ R E L +
Sbjct: 115 WHHRRVLVEWLRDPSQE 131
Score = 43.4 bits (101), Expect = 4e-05
Identities = 11/64 (17%), Positives = 17/64 (26%), Gaps = 1/64 (1%)
Query: 490 AIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLG-YY 548
I + Y A +A AI L+ N + R + L
Sbjct: 35 QIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDL 94
Query: 549 KEAI 552
E +
Sbjct: 95 HEEM 98
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 45.0 bits (105), Expect = 2e-06
Identities = 34/92 (36%), Positives = 49/92 (53%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 521
+ KEKGN+A A+ Y+EAIKL+ +N YSNR+AAY + G + +A D
Sbjct: 1 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDG 60
Query: 522 TKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
K ++L K Y R+ A E L ++EA
Sbjct: 61 CKTVDLKPDWGKGYSRKAAALEFLNRFEEAKR 92
Score = 29.2 bits (64), Expect = 0.52
Identities = 7/38 (18%), Positives = 10/38 (26%), Gaps = 1/38 (2%)
Query: 472 NQAYKDKQWL-KAISFYTEAIKLNGNNATYYSNRAAAY 508
A + +A Y E +K NN
Sbjct: 78 AAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 115
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 45.4 bits (106), Expect = 2e-06
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 448 ATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTE----------------AI 491
A KS + QSA KE+GN+ +K + +AI Y E
Sbjct: 1 AKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLD 60
Query: 492 KLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEA 551
K + N A Y ++ + +A +K + +DK NVKA + G A G+ +EA
Sbjct: 61 KKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEA 120
Query: 552 IE 553
E
Sbjct: 121 KE 122
Score = 30.4 bits (67), Expect = 0.27
Identities = 6/34 (17%), Positives = 10/34 (29%)
Query: 475 YKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAY 508
+A +A LN NN ++
Sbjct: 112 MYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 45.8 bits (107), Expect = 2e-06
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEA---------------IKLNGNNATYYSNRAA 506
+ + I KE+G +K+ ++ +A+ Y + K + N A
Sbjct: 11 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAM 70
Query: 507 AYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
+L+ +F A C KA+ LD N K RRG A + ++ A
Sbjct: 71 CHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARA 117
Score = 31.9 bits (71), Expect = 0.10
Identities = 8/57 (14%), Positives = 17/57 (29%), Gaps = 5/57 (8%)
Query: 479 QWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC-----TKAINLDKK 530
+ A + + + ++L NN + A L E + + K
Sbjct: 111 DFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENK 167
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 45.5 bits (106), Expect = 3e-06
Identities = 21/140 (15%), Positives = 35/140 (25%), Gaps = 50/140 (35%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEA----------------IKLNGNNATYYSNRA 505
+E K GN +K + W AI YT+ KL + N
Sbjct: 25 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIG 84
Query: 506 A----------------------------------AYLESGSFLQAEADCTKAINLDKKN 531
A + + QA AD KA + ++
Sbjct: 85 ACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 144
Query: 532 VKAYLRRGTAREMLGYYKEA 551
++ + K+
Sbjct: 145 KAIQAELLKVKQKIKAQKDK 164
Score = 32.7 bits (73), Expect = 0.065
Identities = 9/84 (10%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Query: 436 NMYASLQEQADIATKSKLSTNTFNQKQSAEIAKEKGNQAYKDKQWL-KAISFYTEAIKLN 494
N+ A + +D S A + Q ++ + +A++ +A ++
Sbjct: 82 NIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIA 141
Query: 495 GNNATYYSNRAAAYLESGSFLQAE 518
+ + + + E
Sbjct: 142 PEDKAIQAELLKVKQKIKAQKDKE 165
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 42.1 bits (98), Expect = 1e-05
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 463 SAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNG-------NNATYYSNRAAAYLESGSFL 515
+AE + E G AY + + + +A++ + + + A + G
Sbjct: 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLD 63
Query: 516 QAEADCTKAINLDKKNVKAYLRRGTAREMLG 546
+A K + LD ++ +A ++
Sbjct: 64 KALLLTKKLLELDPEHQRANGNLKYFEYIMA 94
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 45.2 bits (106), Expect = 1e-05
Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 481 LKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLD-----KKNVKAY 535
L++ + +A L + A + + K + D K V+
Sbjct: 3 LQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDKKVEQD 59
Query: 536 LRRGTAREMLGYYKEAIE 553
L + + + +
Sbjct: 60 LWNHAFKNQITTLQGQAK 77
Score = 43.2 bits (101), Expect = 6e-05
Identities = 10/107 (9%), Positives = 27/107 (25%), Gaps = 5/107 (4%)
Query: 452 KLSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLES 511
+ N N +S A + + + ++ S +
Sbjct: 74 GQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQ 133
Query: 512 GSFLQAEADCTKAINLDKKNVKAYL-----RRGTAREMLGYYKEAIE 553
+ + + ++ +L R + YY+ A +
Sbjct: 134 THTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ 180
Score = 30.1 bits (67), Expect = 0.65
Identities = 10/76 (13%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Query: 462 QSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADC 521
+ + + A L I +Y +I + +N A ++
Sbjct: 184 SNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDE---- 239
Query: 522 TKAINLDKKNVKAYLR 537
K +KA+++
Sbjct: 240 VKTKWGVSDFIKAFIK 255
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 40.6 bits (93), Expect = 2e-04
Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 439 ASLQEQADIATKSK-LSTNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNN 497
+LQ++ +A + L++ + A++ E+G A + +++A+ + +
Sbjct: 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM 70
Query: 498 ATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
++ ++G+F A + LD A+L RG A G K A +
Sbjct: 71 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQD 126
Score = 36.3 bits (82), Expect = 0.006
Identities = 13/83 (15%), Positives = 22/83 (26%)
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKK 530
Q +KQ + + + E E + +AD T +L +
Sbjct: 148 AEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEH 207
Query: 531 NVKAYLRRGTAREMLGYYKEAIE 553
+ G LG A
Sbjct: 208 LSETNFYLGKYYLSLGDLDSATA 230
Score = 30.2 bits (66), Expect = 0.58
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 456 NTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYY 501
NT + +E G A + + A+ N +N +
Sbjct: 201 NTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEH 246
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 39.0 bits (89), Expect = 4e-04
Identities = 8/61 (13%), Positives = 21/61 (34%), Gaps = 12/61 (19%)
Query: 464 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLN------------GNNATYYSNRAAAYLES 511
A +A + ++ +A + A++++ G +A ++ A A
Sbjct: 9 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL 68
Query: 512 G 512
Sbjct: 69 R 69
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 38.4 bits (87), Expect = 0.002
Identities = 9/95 (9%), Positives = 23/95 (24%), Gaps = 5/95 (5%)
Query: 464 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNN-----ATYYSNRAAAYLESGSFLQAE 518
AE + A D +A A++ S G ++
Sbjct: 12 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL 71
Query: 519 ADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
A + + +++ + + +
Sbjct: 72 ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGF 106
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 37.3 bits (85), Expect = 0.004
Identities = 14/120 (11%), Positives = 42/120 (35%), Gaps = 8/120 (6%)
Query: 441 LQEQADIATKSKL-------STNTFNQKQSAEIAKEKGNQAYKDKQWLKAISFYTEAIKL 493
L ++A+ ++++ +++A++ + K+ A + +A
Sbjct: 7 LLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADY 66
Query: 494 NGNNATYYSNRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREMLGYYKEAIE 553
Y+E+ ++ + A++ + ++ + RG R + E E
Sbjct: 67 QKKA-GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGE 125
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC)
{Helicobacter pylori [TaxId: 210]}
Length = 265
Score = 32.6 bits (72), Expect = 0.090
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 464 AEIAKEKGNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAYLE 510
+ G ++YK+K + +A ++ +A L N+ + N Y +
Sbjct: 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCF--NLGVLYYQ 46
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 30.5 bits (68), Expect = 0.22
Identities = 5/38 (13%), Positives = 12/38 (31%)
Query: 471 GNQAYKDKQWLKAISFYTEAIKLNGNNATYYSNRAAAY 508
Y+ K++ KA+ + ++ N
Sbjct: 79 AVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 116
Score = 27.8 bits (61), Expect = 1.6
Identities = 3/54 (5%), Positives = 8/54 (14%), Gaps = 3/54 (5%)
Query: 503 NRAAAYLESGSFLQAEADCTKAINLDKKNVKAYLRRGTAREM---LGYYKEAIE 553
+ L+ E + ++ I
Sbjct: 4 AVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIV 57
>d2pgga1 e.8.1.4 (A:31-804) Viral RNA polymerase {Avian infectious
bursal disease virus [TaxId: 10995]}
Length = 774
Score = 30.7 bits (69), Expect = 0.59
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 14/80 (17%)
Query: 303 YEFKNNH-------NEWIESVKPALDPDISAEIGEMLEIS---ETVIENCKSIRNE-MRS 351
F NNH ++W +P D + I + L I+ E I++ + + +
Sbjct: 458 ATFINNHLLSTLVLDQWNLMRQPRPDSEEFKSIEDKLGINFKIERSIDDIRGKLRQLVLL 517
Query: 352 AISSLLKDDGILVTPTTAYP 371
A L V P + P
Sbjct: 518 AQPGYLSGG---VEPEQSSP 534
>d2b5ea3 c.47.1.2 (A:240-364) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 125
Score = 28.4 bits (63), Expect = 1.1
Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 267 LKHENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR--YEFKNNHN 310
+ +Y +S +P F+ EL+ L + + N
Sbjct: 5 IDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMN 50
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS)
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 28.1 bits (61), Expect = 2.1
Identities = 6/39 (15%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 311 EWIESVKPALDPDISAEIGEMLEISETVIENCKSIRNEM 349
+W E+ D + A++ +L++ ++ ++ R +
Sbjct: 144 DWPEADPALADEALVAQMRAVLKV----VDLARAARAKS 178
>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 551
Score = 28.0 bits (62), Expect = 3.9
Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Query: 274 EYFDSKVPSLKGFHKTNGELKNVMRLIQRYEFK--NNHNEWIESVKPALDPDISAEIGEM 331
E S + + + +G L ++ +LI+R E + + S+KP +
Sbjct: 40 EDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDPQINITKKMPF 99
Query: 332 LEISETVIENCKSIRNEMRSA 352
+ + I +
Sbjct: 100 PYYEDQQLGALSWILDYFHGN 120
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 27.5 bits (59), Expect = 4.3
Identities = 11/59 (18%), Positives = 29/59 (49%)
Query: 315 SVKPALDPDISAEIGEMLEISETVIENCKSIRNEMRSAISSLLKDDGILVTPTTAYPPP 373
+ P LDP+++A + + ++ + N ++ + + A+ + L DG+ + +A
Sbjct: 1 TTFPTLDPELAAALTMLPKVDFADLPNARATYDALIGAMLADLSFDGVSLRELSAPGLD 59
>d2djka1 c.47.1.2 (A:1-133) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 133
Score = 26.0 bits (57), Expect = 8.1
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 269 HENLGEYFDSKVPSLKGFHKTNGELKNVMRLIQR 302
E +Y + +P F +T E K + ++
Sbjct: 13 PETYSDYMSAGIPLAYIFAETAEERKELSDKLKP 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.133 0.390
Gapped
Lambda K H
0.267 0.0557 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,041,640
Number of extensions: 95597
Number of successful extensions: 398
Number of sequences better than 10.0: 1
Number of HSP's gapped: 369
Number of HSP's successfully gapped: 70
Length of query: 554
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 464
Effective length of database: 1,171,896
Effective search space: 543759744
Effective search space used: 543759744
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.4 bits)