BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008757
(554 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 325/555 (58%), Gaps = 28/555 (5%)
Query: 10 YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGA 69
YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K VD+ L GA
Sbjct: 81 YGEGDPTDNAQDFYDWLQETDVD--LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGA 138
Query: 70 KRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYD 129
+R+ +GLGDDD +E+DF WRE W L + +T ++I +Y +V +
Sbjct: 139 QRIFELGLGDDDGNLEEDFITWREQFW------LAVCEHFGVEATGEESSIRQYELVVHT 192
Query: 130 NADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIA 182
+ DA+ +GE KS+ N +DA++P + V ++L+ ++R HLE DI+
Sbjct: 193 DIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDIS 249
Query: 183 GTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP 242
+ + YE+GDHV VY N S V + +LG D SL+ E+ S FP
Sbjct: 250 DSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFP 303
Query: 243 -PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVA 299
P S RTALT Y +E + LR +AS +G K+ Y W+V
Sbjct: 304 CPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVE 363
Query: 300 SQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP 359
++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+ +V +T
Sbjct: 364 ARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 422
Query: 360 TGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFR 419
GR++KG+ + W++ P+ ++ + P+FVR+S F+LP A P+IM+GPGTG+APF
Sbjct: 423 AGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 482
Query: 420 GFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 479
GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAFSRE
Sbjct: 483 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSH 542
Query: 480 KEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 539
K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++ ++A
Sbjct: 543 KVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDY 602
Query: 540 VKNLQMTGRYLRDVW 554
+K L GRY DVW
Sbjct: 603 IKKLMTKGRYSLDVW 617
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 323/555 (58%), Gaps = 28/555 (5%)
Query: 10 YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGA 69
YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K VD+ L GA
Sbjct: 81 YGEGDPTDNAQDFYDWLQETDVD--LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGA 138
Query: 70 KRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYD 129
+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y +V +
Sbjct: 139 QRIFELGLGDDDGNLEEDFITWREQFWPAVCEHF------GVEATGEESSIRQYELVVHT 192
Query: 130 NADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIA 182
+ DA+ +GE KS+ N +DA++P + V ++L+ ++R HLE DI+
Sbjct: 193 DIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDIS 249
Query: 183 GTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP 242
+ + YE+GDHV VY N S V + +LG D SL+ E+ S FP
Sbjct: 250 DSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFP 303
Query: 243 -PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVA 299
P S RTALT Y +E + LR +AS +G K+ Y W+V
Sbjct: 304 CPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVE 363
Query: 300 SQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP 359
++R +L ++ + PS +PP+ ++PRLQ YYSI+SS +V P+ +H+ +V +T
Sbjct: 364 ARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETK 422
Query: 360 TGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFR 419
GR++KG+ + W++ P ++ + P+FVR+S F+LP A P+IM+GPGTG+APF
Sbjct: 423 AGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 482
Query: 420 GFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 479
GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAFSRE
Sbjct: 483 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSH 542
Query: 480 KEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 539
K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++ ++A
Sbjct: 543 KVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDY 602
Query: 540 VKNLQMTGRYLRDVW 554
+K L GRY DVW
Sbjct: 603 IKKLMTKGRYSLDVW 617
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 324/555 (58%), Gaps = 28/555 (5%)
Query: 10 YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGA 69
YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K VD+ L GA
Sbjct: 81 YGEGDPTDNAQDFYDWLQETDVD--LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGA 138
Query: 70 KRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYD 129
+R+ +GLGDDD +E+DF WRE W L + +T ++I +Y +V +
Sbjct: 139 QRIFELGLGDDDGNLEEDFITWREQFW------LAVCEHFGVEATGEESSIRQYELVVHT 192
Query: 130 NADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIA 182
+ DA+ +GE KS+ N +DA++P + V ++L+ ++R HLE DI+
Sbjct: 193 DIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDIS 249
Query: 183 GTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP 242
+ + YE+GDHV VY N S V + +LG D SL+ E+ S FP
Sbjct: 250 DSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFP 303
Query: 243 -PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVA 299
P S RTALT Y +E + LR +AS +G K+ Y W+V
Sbjct: 304 CPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVE 363
Query: 300 SQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP 359
++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+ +V +T
Sbjct: 364 ARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK 422
Query: 360 TGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFR 419
GR++KG + W++ P+ ++ + P+FVR+S F+LP A P+IM+GPGTG+APF
Sbjct: 423 AGRINKGEATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFI 482
Query: 420 GFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 479
GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAFSRE
Sbjct: 483 GFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSH 542
Query: 480 KEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 539
K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++ ++A
Sbjct: 543 KVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDY 602
Query: 540 VKNLQMTGRYLRDVW 554
+K L GRY DVW
Sbjct: 603 IKKLMTKGRYSLDVW 617
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 326/566 (57%), Gaps = 31/566 (5%)
Query: 2 KIYVIGCR--YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKV 59
K V+ C YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K
Sbjct: 67 KSLVVFCMATYGEGDPTDNAQDFYDWLQETDVD--LTGVKFAVFGLGNKTYEHFNAMGKY 124
Query: 60 VDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 119
VD+ L GA+R+ +GLGDDD +E+DF WRE WP + +T ++
Sbjct: 125 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESS 178
Query: 120 ISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 172
I +Y +V +++ D + GE KS+ N +DA++P + V ++L+ ++R
Sbjct: 179 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTER 235
Query: 173 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 232
HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 236 HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE---- 291
Query: 233 GKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG-- 289
S FP P + RTALT Y +E + L +AS +G
Sbjct: 292 --SNKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEG 349
Query: 290 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 349
K+ Y W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 350 KELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHI 408
Query: 350 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 409
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+
Sbjct: 409 CAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMV 468
Query: 410 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 469
GPGTG+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL
Sbjct: 469 GPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQL 528
Query: 470 IVAFSREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
VAFSRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E
Sbjct: 529 NVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEF 588
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDVW 554
G ++ ++A VK L GRY DVW
Sbjct: 589 GPMEHTQAVDYVKKLMTKGRYSLDVW 614
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 325/566 (57%), Gaps = 35/566 (6%)
Query: 2 KIYVIGC--RYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKV 59
K V+ C YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K
Sbjct: 74 KSLVVFCMATYGEGDPTDNAQDFYDWLQETDVD--LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 60 VDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 119
VD+ L GA+R+ +GLGDDD +E+DF WRE WP + + ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE----------ASS 181
Query: 120 ISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 172
I +Y +V +++ D + GE KS+ N +DA++P + V ++L+ ++R
Sbjct: 182 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTER 238
Query: 173 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 232
HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 239 HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE---- 294
Query: 233 GKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG-- 289
S FP P + RTALT Y +E + L +AS +G
Sbjct: 295 --SNKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEG 352
Query: 290 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 349
K+ Y W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 353 KELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHI 411
Query: 350 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 409
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+
Sbjct: 412 CAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMV 471
Query: 410 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 469
GPGTG+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL
Sbjct: 472 GPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQL 531
Query: 470 IVAFSREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
VAFSRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E
Sbjct: 532 NVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEF 591
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDVW 554
G ++ ++A VK L GRY DVW
Sbjct: 592 GPMEHTQAVDYVKKLMTKGRYSLDVW 617
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 325/565 (57%), Gaps = 31/565 (5%)
Query: 2 KIYVIGCR--YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKV 59
K V+ C YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K
Sbjct: 74 KSLVVFCMATYGEGDPTDNAQDFYDWLQETDVD--LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 60 VDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 119
VD+ L GA+R+ +GLGDDD +E+DF WRE WP + +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESS 185
Query: 120 ISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 172
I +Y +V +++ D + GE KS+ N +DA++P + V ++L+ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTER 242
Query: 173 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 232
HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 243 HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE---- 298
Query: 233 GKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG-- 289
S FP P + RTALT Y +E + L +AS +G
Sbjct: 299 --SNKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEG 356
Query: 290 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 349
K+ Y W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 357 KELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHI 415
Query: 350 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 409
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+
Sbjct: 416 CAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMV 475
Query: 410 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 469
GPGTG+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL
Sbjct: 476 GPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQL 535
Query: 470 IVAFSREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
VAFSRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E
Sbjct: 536 NVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEF 595
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDV 553
G ++ ++A VK L GRY DV
Sbjct: 596 GPMEHTQAVDYVKKLMTKGRYSLDV 620
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 325/565 (57%), Gaps = 31/565 (5%)
Query: 2 KIYVIGC--RYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKV 59
K V+ C YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K
Sbjct: 74 KSLVVFCMATYGEGDPTDNAQDFYDWLQETDVD--LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 60 VDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 119
VD+ L GA+R+ +GLGDDD +E+DF WRE WP + +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESS 185
Query: 120 ISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 172
I +Y +V +++ D + GE KS+ N +DA++P + V ++L+ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTER 242
Query: 173 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 232
HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 243 HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE---- 298
Query: 233 GKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG-- 289
S FP P + RTALT Y +E + L +AS +G
Sbjct: 299 --SNKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEG 356
Query: 290 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 349
K+ Y W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 357 KELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHI 415
Query: 350 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 409
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+
Sbjct: 416 CAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMV 475
Query: 410 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 469
GPGTG+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL
Sbjct: 476 GPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQL 535
Query: 470 IVAFSREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
VAFSRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E
Sbjct: 536 NVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEF 595
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDV 553
G ++ ++A VK L GRY DV
Sbjct: 596 GPMEHTQAVDYVKKLMTKGRYSLDV 620
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/566 (38%), Positives = 325/566 (57%), Gaps = 31/566 (5%)
Query: 2 KIYVIGCR--YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKV 59
K V+ C YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K
Sbjct: 74 KSLVVFCMATYGEGDPTDNAQDFYDWLQETDVD--LTGVKFAVFGLGNKTYEHFNAMGKY 131
Query: 60 VDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 119
VD+ L GA+R+ +GLGDDD +E+DF WRE WP + +T ++
Sbjct: 132 VDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESS 185
Query: 120 ISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 172
I +Y +V +++ D + GE KS+ N +DA++P + V ++L+ ++R
Sbjct: 186 IRQYELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTER 242
Query: 173 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 232
HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 243 HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE---- 298
Query: 233 GKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG-- 289
S FP P + RTALT Y +E + L +AS +G
Sbjct: 299 --SNKKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEG 356
Query: 290 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 349
K+ Y W+V ++R +L ++ ++PS +PP+ ++PRLQ RYY+I+SS +V P+ +H+
Sbjct: 357 KELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYAIASSSKVHPNSVHI 415
Query: 350 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 409
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+
Sbjct: 416 CAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMV 475
Query: 410 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 469
GPGTG+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL
Sbjct: 476 GPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQL 535
Query: 470 IVAFSREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
VAFSRE K YVQH + +W ++ E GA++YV GDA++MA+DV T + IV E
Sbjct: 536 NVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVAGDARNMAKDVQNTFYDIVAEF 595
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDVW 554
G ++ ++A VK L GRY +VW
Sbjct: 596 GPMEHTQAVDYVKKLMTKGRYSLNVW 621
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 320/556 (57%), Gaps = 29/556 (5%)
Query: 10 YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGA 69
YG+G+PT NA FY W E + L +K+ VFGLGN+ YEHFN + K VD+ L GA
Sbjct: 84 YGEGDPTCNAQDFYDWLQETDVD--LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGA 141
Query: 70 KRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYD 129
+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y +V ++
Sbjct: 142 QRIFELGLGDDDGNLEEDFITWREQFWPAVAEFF------GVEATGEESSIRQYELVVHE 195
Query: 130 NADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIA 182
+ D + GE KS+ N +DA++P + V ++L+ ++R HLE DI+
Sbjct: 196 DMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMHLELDIS 252
Query: 183 GTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP 242
+ + YE+GDHV VY N S V + +LG D SL+ E+ S FP
Sbjct: 253 DSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SNKKHPFP 306
Query: 243 -PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIVA 299
P + RTALT Y +E + L +AS +G K+ Y W+V
Sbjct: 307 TPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVE 366
Query: 300 SQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP 359
++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+T V +
Sbjct: 367 ARRHILAILQDYPSLRPPIDHLLE-LLPRLQARYYSIASSSKVHPNSVHITAVAVEYEAK 425
Query: 360 TGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFR 419
+GRV+KG+ ++W++ P ++ + P+FV +S F+LP + P+IM+GPGTG+APF
Sbjct: 426 SGRVNKGVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPGTGIAPFM 485
Query: 420 GFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 479
GF+QER L+E G E+G +LL++G R DY+Y +EL F + GAL+QL VAFSRE
Sbjct: 486 GFIQERAWLREQGKEVGETLLYYGARRSDEDYLYREELARFHKDGALTQLNVAFSREQAH 545
Query: 480 KEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAES 538
K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E G ++ ++A
Sbjct: 546 KVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVD 605
Query: 539 MVKNLQMTGRYLRDVW 554
VK L GRY DVW
Sbjct: 606 YVKKLMTKGRYSLDVW 621
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 314/556 (56%), Gaps = 28/556 (5%)
Query: 10 YGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGA 69
YG+G+ D A F + E G L L+Y +FGLGN YE FN AK ++ L+ GA
Sbjct: 98 YGEGDFPDGAVNFEDFICNAEAGA-LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGA 156
Query: 70 KRLVPVGLGDDDQCIED-DFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFY 128
RL +G DD D D+ AW++ + L D+ +T ++I +Y +V +
Sbjct: 157 IRLGKLGEADDGAGTTDEDYMAWKDSILEVLK------DELGVEATGEESSIRQYELVVH 210
Query: 129 DNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDI 181
+ DA+ +GE KS+ N +DA++P + V ++L+ ++R HLE DI
Sbjct: 211 TDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDI 267
Query: 182 AGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTF 241
+ + + YE+GDHV VY N S V + +LG D SL+ E+ S F
Sbjct: 268 SDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPF 321
Query: 242 P-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEYAQWIV 298
P P S RTALT Y +E + LR +AS +G K+ Y W+V
Sbjct: 322 PCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVV 381
Query: 299 ASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKT 358
++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+ +V +T
Sbjct: 382 EARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYET 440
Query: 359 PTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPF 418
GR++KG+ + W++ P ++ + P+FVR+S F+LP A P+IM+GPGTG+APF
Sbjct: 441 KAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPF 500
Query: 419 RGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP 478
GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAFSRE
Sbjct: 501 IGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQS 560
Query: 479 TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAES 538
K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++ ++A
Sbjct: 561 HKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVD 620
Query: 539 MVKNLQMTGRYLRDVW 554
+K L GRY DVW
Sbjct: 621 YIKKLMTKGRYSLDVW 636
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 262/446 (58%), Gaps = 20/446 (4%)
Query: 119 AISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSD 171
+I +Y +V + + DA+ +GE KS+ N +DA++P + V ++L+ ++
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTE 78
Query: 172 RSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTP 231
R HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 79 RHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE--- 135
Query: 232 LGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG- 289
S FP P S RTALT Y +E + LR +AS +G
Sbjct: 136 ---SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGE 192
Query: 290 -KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIH 348
K+ Y W+V ++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H
Sbjct: 193 GKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVH 251
Query: 349 VTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIM 408
+ +V +T GR++KG+ + W++ P+ ++ + P+FVR+S F+LP A P+IM
Sbjct: 252 ICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIM 311
Query: 409 IGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 468
+GPGTG+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+Q
Sbjct: 312 VGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQ 371
Query: 469 LIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
L VAFSRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E
Sbjct: 372 LNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAEL 431
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDVW 554
G+++ ++A +K L GRY DVW
Sbjct: 432 GAMEHAQAVDYIKKLMTKGRYSLDVW 457
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 315 bits (806), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 261/446 (58%), Gaps = 20/446 (4%)
Query: 119 AISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSD 171
+I +Y +V + + DA+ +GE KS+ N +DA++P + V ++L+ ++
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTE 78
Query: 172 RSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTP 231
R HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 79 RHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE--- 135
Query: 232 LGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG- 289
S FP P S RTALT Y +E + LR +AS +G
Sbjct: 136 ---SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGE 192
Query: 290 -KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIH 348
K+ Y W+V ++R +L ++ + PS +PP+ ++PRLQ YYSI+SS +V P+ +H
Sbjct: 193 GKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVH 251
Query: 349 VTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIM 408
+ +V +T GR++KG+ + W++ P+ ++ + P+FVR+S F+LP A P+IM
Sbjct: 252 ICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIM 311
Query: 409 IGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 468
+GPGTG+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+Q
Sbjct: 312 VGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQ 371
Query: 469 LIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQ 528
L VAFSRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E
Sbjct: 372 LNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAEL 431
Query: 529 GSLDSSKAESMVKNLQMTGRYLRDVW 554
G+++ ++A +K L GRY DVW
Sbjct: 432 GAMEHAQAVDYIKKLMTKGRYSLDVW 457
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 291/602 (48%), Gaps = 71/602 (11%)
Query: 3 IYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDE 62
+ + YG+G+ D A F + E G L L+Y +FGLGN YE FN AK ++
Sbjct: 102 VSIFISTYGEGDFPDGAVNFEDFICNAEAGA-LSNLRYNMFGLGNSTYEFFNGAAKKAEK 160
Query: 63 ILANQGAKRLVPVGLGDDDQCIED-DFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAIS 121
L+ GA RL +G DD D D+ AW++ + L + L D+ ++ +
Sbjct: 161 HLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQF----- 215
Query: 122 EYRVVFYDNADASVGEKSWG---------NANGHAV--YDAQHPCRSNVAVRKELHTPSS 170
+Y V+ S+GE S NA+G + +D P + + +EL + S+
Sbjct: 216 QYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFS-SN 274
Query: 171 DRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGT 230
DR+C H EFD++G+ + Y TGDH+ V+ N E VE+ LS+ L P+T F L
Sbjct: 275 DRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLK------- 327
Query: 231 PLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGK 290
PL + P P ++ A+ Y ++L L+ K
Sbjct: 328 PLDPTVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLSK--DK 385
Query: 291 DEYAQWIVASQRSLLEVMSEFPSAKP----PLGVFFAAIVPRLQPRYYSISSSPRVAPSR 346
D++A I + ++ + + P+ F VP++ PRYYSISSS
Sbjct: 386 DQFAVEITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEKQT 444
Query: 347 IHVTCALVYEKTPTGRVHK-----GLCSTWMKN-------------SLPME-------KS 381
+HVT + E P + G+ + ++N +LP+ K
Sbjct: 445 VHVTS--IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKL 502
Query: 382 NDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA------GAEL 435
P+ VR+SNF+LP++ P+IMIGPGTG+APFRGF++ER A E+ L
Sbjct: 503 FANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSL 562
Query: 436 GPSLLFFGCRNRKMDYIYEDELNNFVQS--GALSQLIVAFSREGPTKE-YVQHKMMEKSS 492
G +LF+G RN D++Y+DE + + G+ +++VA SR TK+ YVQ K+ +
Sbjct: 563 GKHILFYGSRNTD-DFLYQDEWPEYAKKLDGSF-EMVVAHSRLPNTKKVYVQDKLKDYED 620
Query: 493 DIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRD 552
++ M++ GA++YVCGDAK MA+ V L I+ S+ + +A ++K L+ +GRY D
Sbjct: 621 QVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQED 680
Query: 553 VW 554
VW
Sbjct: 681 VW 682
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 291/602 (48%), Gaps = 71/602 (11%)
Query: 3 IYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDE 62
+ + YG+G+ D A F + E G L L+Y +FGLGN YE FN AK ++
Sbjct: 102 VSIFISTYGEGDFPDGAVNFEDFICNAEAGA-LSNLRYNMFGLGNSTYEFFNGAAKKAEK 160
Query: 63 ILANQGAKRLVPVGLGDDDQCIED-DFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAIS 121
L+ GA RL +G DD D D+ AW++ + L + L D+ ++ +
Sbjct: 161 HLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQF----- 215
Query: 122 EYRVVFYDNADASVGEKSWG---------NANGHAV--YDAQHPCRSNVAVRKELHTPSS 170
+Y V+ S+GE S NA+G + +D P + + +EL + S+
Sbjct: 216 QYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFS-SN 274
Query: 171 DRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGT 230
DR+C H EFD++G+ + Y TGDH+ V+ N E VE+ LS+ L P+T F L
Sbjct: 275 DRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLK------- 327
Query: 231 PLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGK 290
PL + P P ++ A+ Y ++L L+ K
Sbjct: 328 PLDPTVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLSK--DK 385
Query: 291 DEYAQWIVASQRSLLEVMSEFPSAKP----PLGVFFAAIVPRLQPRYYSISSSPRVAPSR 346
D++A I + ++ + + P+ F VP++ PRYYSISSS
Sbjct: 386 DQFAVEITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEKQT 444
Query: 347 IHVTCALVYEKTPTGRVHK-----GLCSTWMKN-------------SLPME-------KS 381
+HVT + E P + G+ + ++N +LP+ K
Sbjct: 445 VHVTS--IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKL 502
Query: 382 NDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA------GAEL 435
P+ VR+SNF+LP++ P+IMIGPGTG+APFRGF++ER A E+ L
Sbjct: 503 FANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSL 562
Query: 436 GPSLLFFGCRNRKMDYIYEDELNNFVQS--GALSQLIVAFSREGPTKE-YVQHKMMEKSS 492
G +LF+G RN D++Y+DE + + G+ +++VA SR TK+ YVQ K+ +
Sbjct: 563 GKHILFYGSRNTD-DFLYQDEWPEYAKKLDGSF-EMVVAHSRLPNTKKVYVQDKLKDYED 620
Query: 493 DIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRD 552
++ M++ GA++YVCGDAK MA+ V L I+ S+ + +A ++K L+ +GRY D
Sbjct: 621 QVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQED 680
Query: 553 VW 554
VW
Sbjct: 681 VW 682
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 255/537 (47%), Gaps = 32/537 (5%)
Query: 35 LQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWREL 94
L +++ VFGLG+R Y HF VD +L G +R++ + GD+ E+ F W +
Sbjct: 133 LANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELCGQEEAFRTWAKK 192
Query: 95 VWPELDNLLRDDDDPTTVSTPYTAAISE----YRVVFYDNADASVGEKSWGNANGHAVYD 150
V+ ++ DD + P + IS R F A + + G +N H
Sbjct: 193 VFKAACDVFCVGDD-VNIEKPNNSLISNDRSWKRNKFRLTYVAEAPDLTQGLSNVHK--- 248
Query: 151 AQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTG-LTYETGDHVGVYCENLSETVEEAL 209
+ + + R+ L +P S RS + G L Y+ GDH+GV+ N + V +
Sbjct: 249 -KRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALI 307
Query: 210 SLLGLSPDTYFSLHTD--KEDGTPLGKSTL---PPTFPPCSLRTALTKYXXXXXXXXXXX 264
L +P + + +E T LG + PPC++ A Y
Sbjct: 308 ERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQ 367
Query: 265 XXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAA 324
E RL L G EY +W +++EV+ EFPS + P
Sbjct: 368 LQQFASLATNEKEKQRL--LVLSKGLQEYEEWKWGKNPTMVEVLEEFPSIQMP-ATLLLT 424
Query: 325 IVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMKNSLPMEKSN 382
+ LQPRYYSISSSP + P +H+T A+V T G VH G+CS+W+ +++
Sbjct: 425 QLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI----QAD 480
Query: 383 DCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALQEAGAELGPSLL 440
D P FVR + +F LP + +VP I++GPGTG+APFR F Q+R F +Q G P +L
Sbjct: 481 DV--VPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVL 538
Query: 441 FFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPTKEYVQHKMMEK-SSDIWNML 498
FGCR K+D+IY +E G +L A+SRE K+YVQ + E+ + ++ L
Sbjct: 539 VFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRAL 598
Query: 499 SE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
E G ++YVCGD +MA DV + + I+ +QG L A + L+ RY D++
Sbjct: 599 KEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 654
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 207/416 (49%), Gaps = 26/416 (6%)
Query: 164 ELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLH 223
+L T + ++ +E DI+ T +Y+ GD V C N V+ L L L +
Sbjct: 124 QLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHXVL 183
Query: 224 TDKEDGTPLGKSTLPPTFPP-CSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLR 282
+ T +TLP P CSL+ T E RL+
Sbjct: 184 LKIKADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQ 243
Query: 283 HLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV 342
L S G +Y++++ + LL+++ FPS +PPL + + P+LQPR YS +SS
Sbjct: 244 ELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLF 302
Query: 343 APSRIHVTCALV-YEKTPTGRV-HKGLCSTWMK---------NSLPMEKSNDCSWAP--- 388
P ++H +V + T T V KG+C+ W+ N + + + AP
Sbjct: 303 HPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKIS 362
Query: 389 IFVRQSN-FKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE--LGPSLLFFGCR 445
IF R +N F LP D +PIIM+GPGTG+APF GFLQ R LQE + G LFFGCR
Sbjct: 363 IFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCR 422
Query: 446 NRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKE------YVQHKMMEKSSDIWN-ML 498
++ DY++ EL +F++ G L+ L V+FSR+ P E YVQ + + +L
Sbjct: 423 HKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILL 482
Query: 499 SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
E ++YVCGDAK+MA+DVH L I+ ++ ++ +A + L+ RYL+D+W
Sbjct: 483 QENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 199/403 (49%), Gaps = 25/403 (6%)
Query: 157 SNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP 216
+NV KEL P S RS HLE ++ +Y+ GDH+GV N V + GL
Sbjct: 7 TNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDA 65
Query: 217 DTYFSLHTDKED--GTPLGKS-TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXX 273
L ++E PL K+ ++ L+ +T+
Sbjct: 66 SQQIRLEAEEEKLAHLPLAKTVSVEELLQYVELQDPVTRTQLRAMAAKTVAPPHKV---- 121
Query: 274 XXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRY 333
L + K Y + ++A + ++LE++ ++P+ + F A ++P ++PRY
Sbjct: 122 ---------ELEALLEKQAYKEQVLAKRLTMLELLEKYPACEMKFSEFIA-LLPSIRPRY 171
Query: 334 YSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIFVR 392
YSISSSPRV + +T ++V + +G +KG+ S ++ + D I
Sbjct: 172 YSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCFISTP 227
Query: 393 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYI 452
QS F LP D + P+IM+GPGTG+APFRGF+Q R L+E G LG + L+FGCR+ DY+
Sbjct: 228 QSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYL 287
Query: 453 YEDELNNFVQSGALSQLIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAK 511
Y++EL N QS + L AFSR K YVQH M + + +L +GA+ Y+CGD
Sbjct: 288 YQEELEN-AQSEGIITLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGS 346
Query: 512 SMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
MA V TL + + + A ++ L+ GRY +DVW
Sbjct: 347 QMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVW 389
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 199/403 (49%), Gaps = 25/403 (6%)
Query: 157 SNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP 216
+NV KEL P S RS HLE ++ +Y+ GDH+GV N V + GL
Sbjct: 9 TNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDA 67
Query: 217 DTYFSLHTDKED--GTPLGKS-TLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXX 273
L ++E PL K+ ++ L+ +T+
Sbjct: 68 SQQIRLEAEEEKLAHLPLAKTVSVEELLQYVELQDPVTRTQLRAMAAKTVCPPHKV---- 123
Query: 274 XXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRY 333
L + K Y + ++A + ++LE++ ++P+ + F A ++P ++PRY
Sbjct: 124 ---------ELEALLEKQAYKEQVLAKRLTMLELLEKYPACEMKFSEFIA-LLPSIRPRY 173
Query: 334 YSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIFVR 392
YSISSSPRV + +T ++V + +G +KG+ S ++ + D I
Sbjct: 174 YSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCFISTP 229
Query: 393 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYI 452
QS F LP D + P+IM+GPGTG+APFRGF+Q R L+E G LG + L+FGCR+ DY+
Sbjct: 230 QSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYL 289
Query: 453 YEDELNNFVQSGALSQLIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAK 511
Y++EL N QS + L AFSR K YVQH M + + +L +GA+ Y+CGD
Sbjct: 290 YQEELEN-AQSEGIITLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGS 348
Query: 512 SMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
MA V TL + + + A ++ L+ GRY +DVW
Sbjct: 349 QMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVW 391
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 206/416 (49%), Gaps = 26/416 (6%)
Query: 164 ELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLH 223
+L T + ++ +E DI+ T +Y+ GD V C N V+ L L L +
Sbjct: 124 QLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHXVL 183
Query: 224 TDKEDGTPLGKSTLPPTFPP-CSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLR 282
+ T +TLP P SL+ T E RL+
Sbjct: 184 LKIKADTKKKGATLPQHIPAGXSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQ 243
Query: 283 HLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV 342
L S G +Y++++ + LL+++ FPS +PPL + + P+LQPR YS +SS
Sbjct: 244 ELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLF 302
Query: 343 APSRIHVTCALV-YEKTPTGRV-HKGLCSTWMK---------NSLPMEKSNDCSWAP--- 388
P ++H +V + T T V KG+C+ W+ N + + + AP
Sbjct: 303 HPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKIS 362
Query: 389 IFVRQSN-FKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE--LGPSLLFFGCR 445
IF R +N F LP D +PIIM+GPGTG+APF GFLQ R LQE + G LFFGCR
Sbjct: 363 IFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCR 422
Query: 446 NRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKE------YVQHKMMEKSSDIWN-ML 498
++ DY++ EL +F++ G L+ L V+FSR+ P E YVQ + + +L
Sbjct: 423 HKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILL 482
Query: 499 SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
E ++YVCGDAK+MA+DVH L I+ ++ ++ +A + L+ RYL+D+W
Sbjct: 483 QENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 201/406 (49%), Gaps = 23/406 (5%)
Query: 162 RKELHTPSSDRSCTHLEFDIAGTG-LTYETGDHVGVYCENLSETVEEALSLLGLSPDTYF 220
R+ L +P S RS + G L Y+ GDH+GV+ N + V + L +P
Sbjct: 38 RQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANH 97
Query: 221 SLHTD--KEDGTPLGKSTL---PPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXX 275
+ + +E T LG + PPC++ A Y
Sbjct: 98 VVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNE 157
Query: 276 TEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYS 335
E RL L G EY +W +++EV+ EFPS + P + LQPRYYS
Sbjct: 158 KEKQRL--LVLSKGLQEYEEWKWGKNPTMVEVLEEFPSIQMP-ATLLLTQLSLLQPRYYS 214
Query: 336 ISSSPRVAPSRIHVTCALV--YEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ 393
ISSSP + P +H+T A+V + + G VH G+CS+W+ +++D P FVR
Sbjct: 215 ISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI----QADDV--VPCFVRG 268
Query: 394 S-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALQEAGAELGPSLLFFGCRNRKMDY 451
+ +F LP + +VP I++GPGTG+APFR F Q+R F +Q G P +L FGCR K+D+
Sbjct: 269 APSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDH 328
Query: 452 IYEDELNNFVQSGALSQLIVAFSRE-GPTKEYVQHKMMEK-SSDIWNMLSE-GAYLYVCG 508
IY +E G +L A+SRE K+YVQ + E+ + ++ L E G ++YVCG
Sbjct: 329 IYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCG 388
Query: 509 DAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
D +MA DV + + I+ +QG L A + L+ RY D++
Sbjct: 389 DV-TMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 433
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 208/407 (51%), Gaps = 39/407 (9%)
Query: 149 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEA 208
Y P ++++V +++ +S++ H+E D+ +GL Y+ GD +GV+ +N V+E
Sbjct: 6 YSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEL 65
Query: 209 LSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXX 268
+ LL L D E T GK TLP L AL +
Sbjct: 66 VELLWLKGD---------EPVTVEGK-TLP-------LNEALQWHFELTVNTANIVENYA 108
Query: 269 XXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPR 328
T ++ L L K ++ A+ +++ M F A+ + P
Sbjct: 109 TL-----TRSETLLPLVGDKAKLQH----YAATTPIVD-MVRFSPAQLDAEALINLLRP- 157
Query: 329 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAP 388
L PR YSI+SS + +HVT +V GR G S+++ + + E
Sbjct: 158 LTPRLYSIASSQAEVENEVHVTVGVVRYDV-EGRARAGGASSFLADRVEEEGE-----VR 211
Query: 389 IFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNR 447
+F+ + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A + G + LFFG +
Sbjct: 212 VFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGK----NWLFFGNPHF 267
Query: 448 KMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVC 507
D++Y+ E +V+ G L+++ +A+SR+ K YVQ K+ E+ +++W +++GA++YVC
Sbjct: 268 TEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVC 327
Query: 508 GDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
GDA MA+DV + L ++ E G +D+ A+ + L++ RY RDV+
Sbjct: 328 GDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human
Cytochrome P450 Reductase At 1.93a Resolution
Length = 181
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 5 VIGC--RYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDE 62
V+ C YG+G+PTDNA FY W E + L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 73 VVFCMATYGEGDPTDNAQDFYDWLQETDVD--LSGVKFAVFGLGNKTYEHFNAMGKYVDK 130
Query: 63 ILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWP 97
L GA+R+ +GLGDDD +E+DF WRE WP
Sbjct: 131 RLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWP 165
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 332 RYYSISSSPRVAPSRIHVTCAL-----VYEKTPTGR---VHKGLCSTWMKNSLPMEKSND 383
R YSI+S+ R + T +L VY TG+ G+CS ++ NS P +K
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQL 144
Query: 384 CSWAPIFVRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGP-SLLF 441
+ + LP D IMI GTG+APFRG+L+ F G + LF
Sbjct: 145 TGPSGKIML-----LPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLF 199
Query: 442 FGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWN 496
G N +Y++E ++++ + + A SRE K YVQ K+ E S +I+
Sbjct: 200 LGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFK 258
Query: 497 MLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQ 544
+L GA++Y CG K M + TL + + +G K + KN Q
Sbjct: 259 LLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 305
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 332 RYYSISSSPRVAPSRIHVTCAL-----VYEKTPTGR---VHKGLCSTWMKNSLPMEKSND 383
R YSI+S+ R + T +L VY TG+ G+CS ++ NS P +K
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQL 144
Query: 384 CSWAPIFVRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGP-SLLF 441
+ + LP D IMI GTG+APFRG+L+ F G + LF
Sbjct: 145 TGPSGKIML-----LPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLF 199
Query: 442 FGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWN 496
G N +Y++E ++++ + + A SRE K YVQ K+ E S +I+
Sbjct: 200 LGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFK 258
Query: 497 MLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQ 544
+L GA++Y CG K M + TL + + +G K + KN Q
Sbjct: 259 LLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 305
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 332 RYYSISSSPRVAPSRIHVTCAL-----VYEKTPTGR---VHKGLCSTWMKNSLPMEKSND 383
R YSI+S+ R + T +L VY TG+ G+CS ++ NS P +K
Sbjct: 91 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQL 149
Query: 384 CSWAPIFVRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGP-SLLF 441
+ + LP D IMI GTG+APFRG+L+ F G + LF
Sbjct: 150 TGPSGKIML-----LPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLF 204
Query: 442 FGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWN 496
G N +Y++E ++++ + + A SRE K YVQ K+ E S +I+
Sbjct: 205 LGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFK 263
Query: 497 MLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQ 544
+L GA++Y CG K M + TL + + +G K + KN Q
Sbjct: 264 LLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 310
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEVVKGVCSNFLCDLKPGAEVKIT--G 149
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQ-EAGAELGPSLLFFGCRN 446
P+ +P D IIM+ GTG+APFR FL + F + E G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLFLGVPT 206
Query: 447 RKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SE 500
+Y++EL + + +L A SRE K Y+Q +M E ++W +L +
Sbjct: 207 SDT-LLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEELWELLKKD 265
Query: 501 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y+Y+CG K M + + + + + G
Sbjct: 266 NTYVYMCG-LKGMEKGIDDIMLDLAAKDG 293
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 332 RYYSISSSPR--VAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ + ++ C L Y+ +G G+CST++ N LP+ +
Sbjct: 179 RLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCN-LPVGTDDVKITG 237
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ LP D ++M+ GTG+APFR FL F Q + G + L FG
Sbjct: 238 PV---GKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGV-P 293
Query: 447 RKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWNMLSE- 500
+ +Y+D+ + +L A SRE T K YVQ ++ E + +++ M+ +
Sbjct: 294 YTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKP 353
Query: 501 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + T +++G
Sbjct: 354 NTHVYMCG-LKGMQPPIDETFTAEAEKRG 381
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G + KG+CS ++ + P ++
Sbjct: 89 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEIVKGVCSNFLCDLKP--GADVKITG 145
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+ GTG+APFR FL + F + + G + LF G
Sbjct: 146 PV---GKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPT 202
Query: 447 RKMDYIYEDELNNFVQSGALS-QLIVAFSRE----GPTKEYVQHKMMEKSSDIWNML-SE 500
+Y++EL + + +L A SRE K Y+Q +M E ++W +L +
Sbjct: 203 SD-SLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKD 261
Query: 501 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y+Y+CG K M + + + + + G
Sbjct: 262 NTYVYMCG-LKGMEKGIDDIMLNLAAKDG 289
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C L+Y G + KG+CS ++ + P + N
Sbjct: 93 RLYSIASSAIGDFGDSKTVSLCVKRLIY-TNDAGEIVKGVCSNFLCDLQPGD--NVQITG 149
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D IIM+ GTG+APFR FL + F + + G LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPT 206
Query: 447 RKMDYIYEDELNNFVQSGALS-QLIVAFSRE----GPTKEYVQHKMMEKSSDIWNML-SE 500
+Y++E + + ++ A SRE + Y+Q +M E ++W +L +
Sbjct: 207 SS-SLLYKEEFGKMKERAPENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKD 265
Query: 501 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y+Y+CG K M + + + ++ ++ G
Sbjct: 266 NTYVYMCG-LKGMEKGIDDIMVSLAEKDG 293
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-VKGMEKGIDDIMVSLAAKDG 287
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 74 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 130
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 131 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 187
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 188 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 247
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + + + ++ + G
Sbjct: 248 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 274
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 191
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 3 IYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEH-FNKIAKVVD 61
+ ++ Y +G P DNA +F W + E ++ ++Y VFG G++ + + K+ +D
Sbjct: 71 VLIVTASY-NGHPPDNAKQFVDWLDQASADE-VKGVRYSVFGCGDKNWATTYQKVPAFID 128
Query: 62 EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPEL 99
E LA +GA+ + G D E + WRE +W ++
Sbjct: 129 ETLAAKGAENIADRGEADASDDFEGTYEEWREHMWSDV 166
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y+Y+CG K M + + + ++ +G
Sbjct: 267 TYVYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y Y+CG K M + + + ++ +G
Sbjct: 267 TYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G KG+CS ++ + P
Sbjct: 75 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDKGEEVKGVCSNFLCDLKPGADVKIT--G 131
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 132 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 188
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 189 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWTLLKKDN 248
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+CG K M + + + ++ ++G
Sbjct: 249 TFVYMCG-LKGMEQGIDDIMSSLAAKEG 275
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y Y+CG K M + + + ++ +G
Sbjct: 267 TYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
Y Y+CG K M + + + ++ +G
Sbjct: 267 TYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554
+ ++ + Y+CG + M + L ++G S K+L+ GR+ + W
Sbjct: 252 IKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSDYQ----KDLKKAGRWHVETW 304
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ +E + Y+CG
Sbjct: 252 IKNEKTHTYICG 263
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 361 GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRG 420
G KG+CS ++ + P + P+ +P D IIM+G GTG+APFR
Sbjct: 125 GETIKGVCSNFLCDLKPGAEVKLT--GPV---GKEMLMPKDPNATIIMLGTGTGIAPFRS 179
Query: 421 FLQERFALQEAGAEL-GPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 479
FL + F + + G + LF G E+ ++ +L A SRE
Sbjct: 180 FLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTN 239
Query: 480 ----KEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQG 529
K Y+Q +M + + ++W ML + Y Y+CG K M + + + ++ +G
Sbjct: 240 EKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 332 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 446
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 447 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 501
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 502 AYLYVCGDAKSMARDVHRTLHTIVQEQG 529
++Y+ G K M + + + ++ + G
Sbjct: 261 TFVYMMG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 330 QPRYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCS 385
Q R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 76 QLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT- 134
Query: 386 WAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLL 440
P+ LP D + +IM+ GTG+AP R +L F E A G S L
Sbjct: 135 -GPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWL 190
Query: 441 FFGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIW 495
FG + +Y++EL Q + +L A SRE + Y+Q ++ E + +W
Sbjct: 191 VFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLW 249
Query: 496 NML-SEGAYLYVCG 508
++ ++ + Y+CG
Sbjct: 250 QLIKNQKTHTYICG 263
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + ++W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + ++W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKKMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 332 RYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV 391
R YSI+SS + T +L ++ P G +CS ++ + P + P+
Sbjct: 102 RLYSIASSA-IGDFGDSKTVSLCVKRVPDG-----VCSNFLCDLKPGSEVKIT--GPV-- 151
Query: 392 RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRNRKMD 450
+P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 152 -GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSL 210
Query: 451 YIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEGAYLY 505
E+ ++ +L A SRE K Y+Q +M + + ++W +L + ++Y
Sbjct: 211 LYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVY 270
Query: 506 VCGDAKSMARDVHRTLHTIVQEQG 529
+CG K M + + + ++ + G
Sbjct: 271 MCG-LKGMEKGIDDIMVSLAAKDG 293
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 353 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 412
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 94 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 148
Query: 413 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 467
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 149 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 207
Query: 468 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 508
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 208 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 254
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 353 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 412
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 94 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 148
Query: 413 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 467
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 149 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 207
Query: 468 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 508
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 208 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 254
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 3 IYVIGCRYGDGEPTDNAARFYK-WFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVD 61
+ V+ +G+G+ N + K F KE K +Y VFGLG+ Y F A +D
Sbjct: 90 LLVVTSTFGNGDCPGNGEKLKKSLFMLKELN---NKFRYAVFGLGSSMYPRFCAFAHDID 146
Query: 62 EILANQGAKRLVPVGLGDDDQCIEDDFSAW 91
+ L++ GA +L P+G GD+ ED F +W
Sbjct: 147 QKLSHLGASQLTPMGEGDELSGQEDAFRSW 176
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGATVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PV---GKEMLLPDDPEANVIMLAGGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PL---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+ P R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + ++W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+ P R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 332 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 387
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 442
P+ LP D + +IM+ GTG+ P R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 443 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 497
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 498 L-SEGAYLYVCG 508
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 353 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 412
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLAGG 157
Query: 413 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 467
TG+ P R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 468 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 508
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 25/183 (13%)
Query: 365 KGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLP-ADAKVPIIMIGPGTGLAPFRGFLQ 423
KG+CS +M + P ++ + F LP D I+ + GTG+APF G +
Sbjct: 131 KGVCSNYMCDLKPGDEVTMTGPS-----GKKFLLPNTDFSGDIMFLATGTGIAPFIG-MS 184
Query: 424 ERFALQEAGAELGPSLLFFGCRNRK----MDYI--YEDELNNFVQSGALSQLIVAFSREG 477
E + G L +G MDY+ E + NF +LI A SRE
Sbjct: 185 EELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNF-------KLITAISREE 237
Query: 478 PT-----KEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 532
+ Y+ H++ E++ + +L+ G Y+CG K M + V + I G+ +
Sbjct: 238 KNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYE 297
Query: 533 SSK 535
K
Sbjct: 298 EFK 300
>pdb|3JQQ|A Chain A, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|B Chain B, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|C Chain C, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|D Chain D, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|E Chain E, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|F Chain F, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 332 RYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPI 389
R YSISSS + + + YE+T + G CS ++KN K ND I
Sbjct: 101 RLYSISSSNNMENLSVAIKIH-KYEQTENAPNITNYGYCSGFIKNL----KIND----DI 151
Query: 390 FVRQSN--FKLPADA---KVPIIMIGPGTGLAPFRGFLQERFALQEAG------AELGPS 438
++ ++ F LP DA I I GTG++P+ FL++ FA + G
Sbjct: 152 YLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYI 211
Query: 439 LLFFGCRNRKMDYIYEDELNNFVQ---SGALSQLIVAFSREG-PTKEYVQHKMMEKSSDI 494
+++G N +Y +EL F + + + ++ + T YVQ ++ ++ ++
Sbjct: 212 TIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEF 270
Query: 495 WNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 539
N+ + LY+CG + + + I++ D K + +
Sbjct: 271 LNLFNNYKCELYICG-----KKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|3JQP|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|B Chain B, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|C Chain C, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|D Chain D, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|E Chain E, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|F Chain F, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQR|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 332 RYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPI 389
R YSISSS + + + YE+T + G CS ++KN K ND I
Sbjct: 101 RLYSISSSNNMENLSVAIKIH-KYEQTENAPNITNYGYCSGFIKNL----KIND----DI 151
Query: 390 FVRQSN--FKLPADA---KVPIIMIGPGTGLAPFRGFLQERFALQEAG------AELGPS 438
++ ++ F LP DA I I GTG++P+ FL++ FA + G
Sbjct: 152 YLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYI 211
Query: 439 LLFFGCRNRKMDYIYEDELNNFVQ---SGALSQLIVAFSREG-PTKEYVQHKMMEKSSDI 494
+++G N +Y +EL F + + + ++ + T YVQ ++ ++ ++
Sbjct: 212 TIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEF 270
Query: 495 WNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 539
N+ + LY+CG + + + I++ D K + +
Sbjct: 271 LNLFNNYKCELYICG-----LKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|2OK7|A Chain A, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|B Chain B, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|C Chain C, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|D Chain D, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|E Chain E, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|F Chain F, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK8|A Chain A, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|B Chain B, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|C Chain C, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|D Chain D, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
Length = 316
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 332 RYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPI 389
R YSISSS + + + YE+T + G CS ++KN K ND I
Sbjct: 101 RLYSISSSNNMENLSVAIKIH-KYEQTENAPNITNYGYCSGFIKNL----KIND----DI 151
Query: 390 FVRQSN--FKLPADA---KVPIIMIGPGTGLAPFRGFLQERFALQEAG------AELGPS 438
++ ++ F LP DA I I GTG++P+ FL++ FA + G
Sbjct: 152 YLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYI 211
Query: 439 LLFFGCRNRKMDYIYEDELNNFVQ---SGALSQLIVAFSREG-PTKEYVQHKMMEKSSDI 494
+++G N +Y +EL F + + + ++ + T YVQ ++ ++ ++
Sbjct: 212 TIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEF 270
Query: 495 WNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 539
N+ + LY+CG + + + I++ D K + +
Sbjct: 271 LNLFNNYKCELYICG-----HKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The
Escherichia Coli Sulfite Reductase
Length = 167
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 3 IYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDE 62
+ V+ G+GEP + A +K+ K+ + L+ + VF LG+ YE F + K D
Sbjct: 60 LIVVTSTQGEGEPPEEAVALHKFLFSKKAPK-LENTAFAVFSLGDTSYEFFCQSGKDFDS 118
Query: 63 ILANQGAKRLV 73
LA G +RL+
Sbjct: 119 KLAELGGERLL 129
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin
pdb|2HNB|A Chain A, Solution Structure Of A Bacterial Holo-Flavodoxin
Length = 147
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 5 VIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEIL 64
VI +G G+ DN + FY+ E++ L +++G G+G+R+Y+ F ++ L
Sbjct: 52 VISSTHGAGDIPDNLSPFYEALQEQKPD--LSAVRFGAIGIGSREYDTFCGAIDKLEAEL 109
Query: 65 ANQGAKR 71
N GAK+
Sbjct: 110 KNSGAKQ 116
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 330 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPI 389
+ R YS SS P +R+ V P G++ + L S+ + + S+
Sbjct: 154 ETRSYSFSSQPG---NRL---TGFVVRNVPQGKMSEYL-------SVQAKAGDKMSFTGP 200
Query: 390 FVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKM 449
F +F L D K P++M+ GTG+APF LQ L++ G+E P L FG +
Sbjct: 201 F---GSFYL-RDVKRPVLMLAGGTGIAPFLSMLQ---VLEQKGSE-HPVRLVFGV-TQDC 251
Query: 450 DYIYEDELNNFVQ 462
D + ++L+ Q
Sbjct: 252 DLVALEQLDALQQ 264
>pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
pdb|1CQX|B Chain B, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
Length = 403
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 44/249 (17%)
Query: 282 RHLASPAGKDEYAQWIVASQRSLLEVMSEF---PSAKPPLGVF-------FAAIVPRL-- 329
R P G + +++ +R +V++ F P+ P+ F A VP L
Sbjct: 143 RSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGL 202
Query: 330 -QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAP 388
Q R YS+S P RI V ++ G G S + + + N
Sbjct: 203 QQIRQYSLSDMPNGRTYRISV------KREGGGPQPPGYVSNLLHDHV-----NVGDQVK 251
Query: 389 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRK 448
+ +F + DAK PI++I G GL P L + ALQ ++ + G RN
Sbjct: 252 LAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSML--KVALQAPPRQV---VFVHGARNSA 306
Query: 449 MDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEY-----VQHKMMEKSSDIWNMLS 499
+ + D L ++ L V + + P ++Y V K +EKS +L
Sbjct: 307 V-HAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKS-----ILL 360
Query: 500 EGAYLYVCG 508
A Y+CG
Sbjct: 361 PDADYYICG 369
>pdb|3OZU|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Miconazole
pdb|3OZV|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZV|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZW|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
pdb|3OZW|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
Length = 403
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 44/249 (17%)
Query: 282 RHLASPAGKDEYAQWIVASQRSLLEVMSEF---PSAKPPLGVF-------FAAIVPRL-- 329
R P G + +++ +R +V++ F P+ P+ F A VP L
Sbjct: 143 RSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGL 202
Query: 330 -QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAP 388
Q R YS+S P RI V ++ G G S + + + N
Sbjct: 203 QQIRQYSLSDMPNGRSYRISV------KREGGGPQPPGYVSNLLHDHV-----NVGDQVK 251
Query: 389 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRK 448
+ +F + DAK PI++I G GL P L + ALQ ++ + G RN
Sbjct: 252 LAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSML--KVALQAPPRQV---VFVHGARNSA 306
Query: 449 MDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEY-----VQHKMMEKSSDIWNMLS 499
+ + D L ++ L V + + P ++Y V K +EKS +L
Sbjct: 307 V-HAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKS-----ILL 360
Query: 500 EGAYLYVCG 508
A Y+CG
Sbjct: 361 PDADYYICG 369
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 84 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 140
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 31.2 bits (69), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1FX1|A Chain A, A Crystallographic Structural Study Of The Oxidation
States Of Desulfovibrio Vulgaris Flavodoxin
Length = 148
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 84 QGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 140
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGESSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKQ|A Chain A, D95a Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1AKU|A Chain A, D95a Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1AKV|A Chain A, D95a Semiquinone Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G YE+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGASSYEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1F4P|A Chain A, Y98w Flavodoxin Mutant 1.5a (D. Vulgaris)
Length = 147
Score = 29.3 bits (64), Expect = 5.8, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ +E+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1I1O|A Chain A, Room Temperature Crystal Structure Flavodoxin D. Vulgaris
Mutant Y98h At 2.0 Ang. Resolution
Length = 147
Score = 29.3 bits (64), Expect = 5.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 QKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGL--GDDDQCIEDDFSAW 91
Q K FG G+ +E+F ++E L N GA+ +V GL D + DD W
Sbjct: 83 QGRKVACFGCGDSSHEYFCGAVDAIEEKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|2YXG|A Chain A, Crystal Structure Of Dihyrodipicolinate Synthase (Dapa)
pdb|2YXG|B Chain B, Crystal Structure Of Dihyrodipicolinate Synthase (Dapa)
pdb|2YXG|C Chain C, Crystal Structure Of Dihyrodipicolinate Synthase (Dapa)
pdb|2YXG|D Chain D, Crystal Structure Of Dihyrodipicolinate Synthase (Dapa)
Length = 289
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 445 RNRKMDYI-YEDELNNFVQSGALSQLIVAFSREGPTKEYVQH-KMMEKSSDIWN 496
+N+++D+ E+ +N +++G + V + E PT + +H K++EK D+ N
Sbjct: 14 KNKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,208,376
Number of Sequences: 62578
Number of extensions: 731409
Number of successful extensions: 1695
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1470
Number of HSP's gapped (non-prelim): 127
length of query: 554
length of database: 14,973,337
effective HSP length: 104
effective length of query: 450
effective length of database: 8,465,225
effective search space: 3809351250
effective search space used: 3809351250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)