Query 008757
Match_columns 554
No_of_seqs 268 out of 2562
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 11:01:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008757.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008757hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qe2_A CPR, P450R, NADPH--cyto 100.0 7E-104 2E-108 875.2 59.5 537 2-554 73-617 (618)
2 2bpo_A CPR, P450R, NADPH-cytoc 100.0 1.4E-97 5E-102 833.1 53.1 533 1-554 100-682 (682)
3 1tll_A Nitric-oxide synthase, 100.0 9.6E-95 3.3E-99 810.3 50.5 536 1-554 59-654 (688)
4 3qfs_A CPR, P450R, NADPH--cyto 100.0 2.1E-84 7.1E-89 691.6 49.4 428 119-554 22-457 (458)
5 2qtl_A MSR;, methionine syntha 100.0 1.2E-79 4E-84 668.7 43.3 407 145-554 105-538 (539)
6 4dql_A Bifunctional P-450/NADP 100.0 3.5E-78 1.2E-82 635.2 40.2 382 153-554 5-391 (393)
7 1f20_A Nitric-oxide synthase; 100.0 1.3E-75 4.3E-80 624.4 41.7 396 149-554 25-433 (435)
8 1ddg_A Sulfite reductase (NADP 100.0 8.8E-74 3E-78 598.8 39.2 368 148-554 5-374 (374)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 1.6E-36 5.6E-41 310.6 25.8 271 150-554 33-314 (314)
10 2bmw_A Ferredoxin--NADP reduct 100.0 4.9E-36 1.7E-40 305.6 27.9 272 150-554 17-304 (304)
11 3vo2_A Putative uncharacterize 100.0 2.2E-35 7.6E-40 301.6 26.5 272 149-554 28-310 (310)
12 2b5o_A FNR, ferredoxin--NADP r 100.0 7.1E-35 2.4E-39 307.9 26.6 273 149-554 117-402 (402)
13 2rc5_A Ferredoxin-NADP reducta 100.0 1E-33 3.6E-38 289.7 24.5 276 151-554 18-314 (314)
14 3lo8_A Ferredoxin--NADP reduct 100.0 1.2E-33 4E-38 289.0 16.5 227 316-554 61-311 (311)
15 3jqq_A Ferredoxin NADP reducta 100.0 1.5E-31 5.1E-36 273.8 23.7 290 149-554 10-316 (316)
16 1tvc_A Methane monooxygenase c 99.9 2.3E-24 7.8E-29 213.0 13.4 184 315-524 43-232 (250)
17 1qfj_A Protein (flavin reducta 99.9 2.9E-24 1E-28 209.7 9.1 182 315-523 29-216 (232)
18 3hr4_A Nitric oxide synthase, 99.9 6.6E-24 2.3E-28 203.5 11.0 104 1-106 88-191 (219)
19 2r6h_A NADH:ubiquinone oxidore 99.9 2.4E-23 8.1E-28 210.2 13.5 182 328-524 83-277 (290)
20 1krh_A Benzoate 1,2-dioxygenas 99.9 1.7E-23 5.9E-28 216.0 12.0 181 315-524 138-323 (338)
21 1fdr_A Flavodoxin reductase; f 99.9 4.2E-24 1.4E-28 210.7 6.8 188 315-525 30-230 (248)
22 4eh1_A Flavohemoprotein; struc 99.9 2.8E-23 9.6E-28 204.1 10.3 183 315-525 33-224 (243)
23 2eix_A NADH-cytochrome B5 redu 99.9 4.2E-23 1.4E-27 202.9 11.4 168 330-524 59-233 (243)
24 1gvh_A Flavohemoprotein; oxido 99.9 5.8E-23 2E-27 216.7 12.5 181 315-524 182-378 (396)
25 4fk8_A Ferredoxin--NADP reduct 99.9 2.8E-24 9.7E-29 214.9 0.7 203 315-554 46-268 (271)
26 1umk_A B5R, NADH-cytochrome B5 99.9 6.8E-23 2.3E-27 205.3 10.1 177 330-524 64-265 (275)
27 1ep3_B Dihydroorotate dehydrog 99.9 6.4E-23 2.2E-27 204.2 6.7 171 316-523 34-211 (262)
28 2bgi_A Ferredoxin-NADP(H) redu 99.9 4.6E-23 1.6E-27 206.4 5.4 186 316-524 44-248 (272)
29 4g1v_A Flavohemoglobin; three 99.9 8.9E-22 3.1E-26 207.8 15.6 170 329-524 204-378 (399)
30 2qdx_A Ferredoxin reductase; o 99.9 4.6E-23 1.6E-27 204.5 4.7 187 315-524 30-234 (257)
31 1cqx_A Flavohemoprotein; globi 99.9 3.1E-22 1.1E-26 211.6 10.4 189 315-524 184-384 (403)
32 2cnd_A NADH-dependent nitrate 99.9 5.5E-22 1.9E-26 198.0 8.2 176 330-523 60-258 (270)
33 2pia_A Phthalate dioxygenase r 99.8 1.6E-21 5.3E-26 199.9 6.8 173 316-523 39-214 (321)
34 1bvy_F Protein (cytochrome P45 99.7 4.5E-18 1.5E-22 160.7 10.1 98 1-100 69-167 (191)
35 2gpj_A Siderophore-interacting 99.6 3.1E-17 1.1E-21 162.1 2.3 166 317-522 40-211 (252)
36 1ykg_A SIR-FP, sulfite reducta 99.6 5.3E-16 1.8E-20 143.5 9.2 100 1-103 58-157 (167)
37 2hna_A Protein MIOC, flavodoxi 99.6 7E-17 2.4E-21 146.1 1.5 97 1-99 48-146 (147)
38 3a1f_A Cytochrome B-245 heavy 99.6 2.6E-16 8.8E-21 147.4 4.8 132 392-525 6-170 (186)
39 3lyu_A Putative hydrogenase; t 99.6 1.7E-15 5.8E-20 136.2 6.7 120 388-525 4-131 (142)
40 3lrx_A Putative hydrogenase; a 99.6 9.1E-16 3.1E-20 140.6 3.8 120 388-525 9-136 (158)
41 3f6r_A Flavodoxin; FMN binding 99.4 8.5E-14 2.9E-18 125.7 6.1 94 1-98 51-147 (148)
42 1f4p_A Flavodoxin; electron tr 99.3 1.9E-12 6.4E-17 116.6 6.7 94 1-98 50-146 (147)
43 1yob_A Flavodoxin 2, flavodoxi 99.3 5.5E-12 1.9E-16 117.7 8.7 96 1-100 48-176 (179)
44 2wc1_A Flavodoxin; electron tr 99.3 3.9E-12 1.3E-16 119.0 7.2 99 1-103 49-180 (182)
45 2fcr_A Flavodoxin; electron tr 99.2 1.9E-11 6.5E-16 113.4 9.4 95 1-99 47-171 (173)
46 1ag9_A Flavodoxin; electron tr 99.2 1.6E-11 5.4E-16 114.2 6.4 97 1-101 47-169 (175)
47 2bmv_A Flavodoxin; electron tr 99.1 1.5E-11 5.2E-16 112.9 3.4 93 1-99 46-163 (164)
48 2xod_A NRDI protein, NRDI; fla 99.1 4.9E-11 1.7E-15 103.5 5.4 84 1-97 34-118 (119)
49 1obo_A Flavodoxin; electron tr 99.1 1.3E-10 4.4E-15 107.1 7.3 96 1-100 48-168 (169)
50 1czn_A Flavodoxin; FMN binding 99.1 1.3E-10 4.4E-15 107.1 6.6 95 1-99 48-167 (169)
51 1rlj_A NRDI protein; flavoprot 99.0 5.1E-10 1.8E-14 99.7 6.2 83 2-97 46-129 (139)
52 5nul_A Flavodoxin; electron tr 98.7 2.8E-08 9.6E-13 88.0 9.1 86 1-95 47-135 (138)
53 3n3a_C Protein NRDI; ribonucle 98.5 7E-08 2.4E-12 86.1 4.4 81 2-97 61-150 (153)
54 2fz5_A Flavodoxin; alpha/beta 98.2 1.9E-06 6.6E-11 75.6 7.7 87 1-96 48-135 (137)
55 3hly_A Flavodoxin-like domain; 98.1 3.5E-06 1.2E-10 76.7 6.4 90 1-101 53-144 (161)
56 3fni_A Putative diflavin flavo 98.1 2.5E-06 8.6E-11 77.5 4.9 91 1-102 58-150 (159)
57 1e5d_A Rubredoxin\:oxygen oxid 97.4 0.00021 7.1E-09 74.4 7.6 93 1-102 305-399 (402)
58 1ycg_A Nitric oxide reductase; 97.4 0.00013 4.5E-09 75.8 6.0 89 1-98 304-395 (398)
59 2a5l_A Trp repressor binding p 96.9 0.0017 5.9E-08 60.4 7.4 72 1-73 73-144 (200)
60 2ohh_A Type A flavoprotein FPR 96.8 0.00081 2.8E-08 69.9 5.1 92 1-99 309-402 (404)
61 2q9u_A A-type flavoprotein; fl 96.5 0.0051 1.7E-07 64.1 8.5 92 1-101 309-405 (414)
62 3klb_A Putative flavoprotein; 96.4 0.0067 2.3E-07 54.7 7.4 80 1-95 80-160 (162)
63 3d7n_A Flavodoxin, WRBA-like p 96.3 0.0051 1.7E-07 57.2 6.3 71 1-72 56-126 (193)
64 2ark_A Flavodoxin; FMN, struct 96.1 0.021 7.3E-07 52.6 9.2 100 1-103 54-169 (188)
65 2zki_A 199AA long hypothetical 96.0 0.01 3.4E-07 55.1 6.6 72 1-73 72-143 (199)
66 3b6i_A Flavoprotein WRBA; flav 96.0 0.0087 3E-07 55.4 6.2 71 1-73 70-140 (198)
67 4ici_A Putative flavoprotein; 95.9 0.018 6E-07 52.5 7.9 79 1-95 89-168 (171)
68 2vzf_A NADH-dependent FMN redu 95.9 0.0083 2.8E-07 55.9 5.5 67 1-73 71-137 (197)
69 1ydg_A Trp repressor binding p 95.6 0.016 5.5E-07 54.3 6.4 72 1-73 80-151 (211)
70 1t5b_A Acyl carrier protein ph 95.2 0.051 1.7E-06 50.2 8.3 99 1-101 88-197 (201)
71 3gfs_A FMN-dependent NADPH-azo 94.8 0.053 1.8E-06 49.1 6.9 65 1-72 65-130 (174)
72 4dik_A Flavoprotein; TM0755, e 94.3 0.049 1.7E-06 56.8 6.1 83 2-94 322-404 (410)
73 1t0i_A YLR011WP; FMN binding p 93.6 0.22 7.4E-06 45.6 8.6 64 1-73 86-149 (191)
74 1sqs_A Conserved hypothetical 93.5 0.14 4.9E-06 49.0 7.3 98 1-101 81-179 (242)
75 1rtt_A Conserved hypothetical 93.5 0.27 9.4E-06 45.1 9.0 70 1-73 74-143 (193)
76 3k1y_A Oxidoreductase; structu 92.1 0.31 1.1E-05 45.0 7.3 66 1-72 87-152 (191)
77 3edo_A Flavoprotein, putative 91.1 0.32 1.1E-05 42.9 6.0 73 1-92 78-150 (151)
78 4hs4_A Chromate reductase; tri 90.6 0.72 2.5E-05 42.8 8.2 69 1-72 75-143 (199)
79 3lcm_A SMU.1420, putative oxid 90.6 0.52 1.8E-05 43.5 7.1 102 1-103 75-189 (196)
80 3u7r_A NADPH-dependent FMN red 89.6 2.7 9.3E-05 38.5 11.1 70 1-72 69-138 (190)
81 3fvw_A Putative NAD(P)H-depend 89.1 1.4 4.8E-05 40.3 8.8 70 1-73 69-144 (192)
82 3ha2_A NADPH-quinone reductase 89.0 2.1 7.2E-05 38.8 9.8 101 1-102 53-167 (177)
83 3svl_A Protein YIEF; E. coli C 88.9 1.4 4.9E-05 40.4 8.8 69 1-72 74-142 (193)
84 2hpv_A FMN-dependent NADH-azor 88.7 1.2 4.2E-05 41.1 8.2 98 1-100 96-202 (208)
85 1rli_A Trp repressor binding p 87.3 1.7 6E-05 38.9 8.1 71 1-72 73-151 (184)
86 3r6w_A FMN-dependent NADH-azor 86.2 2.8 9.7E-05 38.7 9.2 98 1-100 89-206 (212)
87 3rpe_A MDAB, modulator of drug 85.0 6.6 0.00022 36.8 11.0 100 1-103 85-216 (218)
88 2amj_A Modulator of drug activ 84.2 5.3 0.00018 36.8 9.9 75 1-76 72-178 (204)
89 3s2y_A Chromate reductase; ura 84.5 0.2 6.9E-06 46.5 0.0 70 1-73 75-144 (199)
90 3p0r_A Azoreductase; structura 83.7 3 0.0001 38.8 8.0 99 1-101 94-206 (211)
91 2q62_A ARSH; alpha/beta, flavo 83.4 4.4 0.00015 38.8 9.2 69 1-72 100-169 (247)
92 3f2v_A General stress protein 82.8 8 0.00027 35.4 10.4 101 1-102 60-181 (192)
93 3tem_A Ribosyldihydronicotinam 82.0 3.2 0.00011 39.2 7.5 103 1-104 94-215 (228)
94 2fzv_A Putative arsenical resi 78.7 2.8 9.7E-05 40.9 6.1 69 1-72 125-194 (279)
95 1d4a_A DT-diaphorase, quinone 76.5 7.9 0.00027 37.4 8.6 102 1-103 95-215 (273)
96 3u7i_A FMN-dependent NADH-azor 69.2 17 0.00057 34.0 8.7 100 1-101 96-212 (223)
97 3l9w_A Glutathione-regulated p 68.7 22 0.00074 36.6 10.1 101 1-102 294-407 (413)
98 3lo8_A Ferredoxin--NADP reduct 60.4 18 0.0006 35.4 7.3 49 151-200 25-73 (311)
99 1mkz_A Molybdenum cofactor bio 45.8 20 0.00069 32.0 4.5 59 34-92 7-65 (172)
100 2xpn_B SPT6, chromatin structu 36.5 14 0.00048 21.5 1.1 12 37-48 3-14 (26)
101 4gi5_A Quinone reductase; prot 32.6 1.5E+02 0.0051 28.6 8.7 103 1-104 114-243 (280)
102 2lnb_A Z-DNA-binding protein 1 32.6 78 0.0027 24.3 5.1 24 527-550 42-65 (80)
103 3pzy_A MOG; ssgcid, seattle st 29.4 20 0.00067 31.8 1.6 57 35-92 5-63 (164)
104 3s2u_A UDP-N-acetylglucosamine 27.8 41 0.0014 33.5 3.9 25 404-428 3-29 (365)
105 2pjk_A 178AA long hypothetical 26.1 16 0.00054 32.9 0.3 58 34-91 12-76 (178)
106 1y5e_A Molybdenum cofactor bio 23.8 40 0.0014 29.8 2.6 57 35-91 11-67 (169)
107 2r6h_A NADH:ubiquinone oxidore 22.3 1.4E+02 0.0048 28.2 6.5 41 155-200 10-51 (290)
108 1tvc_A Methane monooxygenase c 21.5 91 0.0031 28.9 4.8 42 154-200 10-56 (250)
109 3iwt_A 178AA long hypothetical 21.3 31 0.0011 30.7 1.3 57 35-91 13-76 (178)
110 1lxj_A YBL001C, hypothetical 1 21.2 84 0.0029 25.5 3.8 70 14-90 21-93 (104)
No 1
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=6.9e-104 Score=875.17 Aligned_cols=537 Identities=41% Similarity=0.771 Sum_probs=466.0
Q ss_pred eEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCC
Q 008757 2 KIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDD 81 (554)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~ 81 (554)
.+||++||||+|++|+||+.|+++|.... ..|++++||||||||++|++||+++++++++|+++||++++|+|++|++
T Consensus 73 ~vi~~~sT~G~G~~pd~~~~F~~~L~~~~--~~l~~~~~avfGlGd~~Y~~f~~~~k~~d~~L~~lGa~~~~~~g~~D~~ 150 (618)
T 3qe2_A 73 LVVFCMATYGEGDPTDNAQDFYDWLQETD--VDLSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDD 150 (618)
T ss_dssp EEEEEEECBGGGBCCGGGHHHHHHHHHCC--CCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEETT
T ss_pred EEEEEcCccCCCCCCHHHHHHHHHHhhcc--ccccCCEEEEEeCCCCCcHhHhHHHHHHHHHHHhCCCCEeecccccccC
Confidence 58999999999999999999999998532 3499999999999999999999999999999999999999999999999
Q ss_pred CCcHhhHHHHHHHHhHHHHhhhCCCCCCCCcCCCccccccceEEEEecCCCc---ccccc--ccCCCCCCcccCCCCCee
Q 008757 82 QCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDNADA---SVGEK--SWGNANGHAVYDAQHPCR 156 (554)
Q Consensus 82 ~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 156 (554)
.+++++|++|++.+|++|.+.++.+... . . ...+.+++........ ...+. ..........++..+|+.
T Consensus 151 ~~~~~~~~~W~~~l~~~l~~~~~~~~~~--~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (618)
T 3qe2_A 151 GNLEEDFITWREQFWLAVCEHFGVEATG--E-E---SSIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFL 224 (618)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTCCCC---------CCCCSEEEEECTTCCGGGSBCSCCSSTTTTTSCCSCCSSSSCEE
T ss_pred CCcHHHHHHHHHHHHHHHHHHhCCCccc--c-c---ccccceeEEecccccccccccccccccccccccCCCcccCCcEE
Confidence 9999999999999999999988633211 0 0 1123455554321110 00000 001112233456778999
Q ss_pred EEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCCCCCC
Q 008757 157 SNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 236 (554)
Q Consensus 157 ~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~ 236 (554)
++|+.|++|+. ++.++|+||+|++++++++|+|||+|+|+|.|+++.|+++|++||+++|+.|+++..... ..
T Consensus 225 a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~~~~~------~~ 297 (618)
T 3qe2_A 225 AAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SN 297 (618)
T ss_dssp EEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTT------CS
T ss_pred EEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEecCCcc------cc
Confidence 99999999995 578999999999998899999999999999999999999999999999999999754321 22
Q ss_pred CCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhc--CccCHHHHHHHHHhcCCCHHHHHhhCCC
Q 008757 237 LPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLA--SPAGKDEYAQWIVASQRSLLEVMSEFPS 313 (554)
Q Consensus 237 ~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~--~~~g~~~~~~~~~~~~~~~~d~l~~fp~ 313 (554)
.+.|+| |+|++++|++|+||+++|+++||+.||.||+|+.+|++|++|+ +++|++.|++|+.+.+++++|||.+||+
T Consensus 298 ~~~~~p~~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~~i~dvL~~fps 377 (618)
T 3qe2_A 298 KKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPS 377 (618)
T ss_dssp CCSSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTCCHHHHHHHSTT
T ss_pred CCCCCCCceEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCCCHHHHHHhCCc
Confidence 345788 9999999999999999999999999999999999999999999 7789999999999999999999999999
Q ss_pred CCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEEEec
Q 008757 314 AKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ 393 (554)
Q Consensus 314 ~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~~ 393 (554)
+++|+++|++.+ |+++||+|||||+|..++++++|+|+++.+.++.++.+.|+||+||+++.+.|+......++|+++.
T Consensus 378 ~~~p~~~l~~~l-p~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~~~~~~v~v~~p~ 456 (618)
T 3qe2_A 378 LRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRK 456 (618)
T ss_dssp BCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC-----CCEEEEEEEC
T ss_pred cCCCHHHHHHhc-cccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCCCcceEEEEEEec
Confidence 999999999875 9999999999999987789999999999888888899999999999999873221011257899999
Q ss_pred CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEE
Q 008757 394 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 473 (554)
Q Consensus 394 ~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~ 473 (554)
|.|++|.+..+|+||||+||||||||||++++......+...++++||||||+++.|++|++||++|.+.+.+++++++|
T Consensus 457 g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~g~l~~l~~a~ 536 (618)
T 3qe2_A 457 SQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAF 536 (618)
T ss_dssp CSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEE
T ss_pred CcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHHhcCCCcEEEEEE
Confidence 99999988889999999999999999999999876544444589999999999856999999999999989888999999
Q ss_pred ccCCCCcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeeEee
Q 008757 474 SREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDV 553 (554)
Q Consensus 474 Sr~~~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dv 553 (554)
||++..++||||+|.++.+.+++++.++++||||||+..|+++|.++|.+|++++++++.++|++|+++|+++|||++||
T Consensus 537 Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~~l~~~~RY~~Dv 616 (618)
T 3qe2_A 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDV 616 (618)
T ss_dssp TTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred cCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCeEEee
Confidence 99988899999999999999999888899999999955999999999999999999999999999999999999999999
Q ss_pred C
Q 008757 554 W 554 (554)
Q Consensus 554 w 554 (554)
|
T Consensus 617 ~ 617 (618)
T 3qe2_A 617 W 617 (618)
T ss_dssp E
T ss_pred c
Confidence 9
No 2
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=1.4e-97 Score=833.15 Aligned_cols=533 Identities=32% Similarity=0.600 Sum_probs=453.2
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.+||++||||+|++|+|++.|++||.... ...|++++|||||+||++|++||.+++.++++|+++||+++.+++++|+
T Consensus 100 ~~vi~~~sT~G~G~~p~~~~~F~~~l~~~~-~~~L~~~~~avfGlGds~Y~~f~~a~k~l~~~L~~lGa~~l~~~~~~D~ 178 (682)
T 2bpo_A 100 VIVSIFISTYGEGDFPDGAVNFEDFICNAE-AGALSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADD 178 (682)
T ss_dssp SEEEEEEECBTTTBCCSSCHHHHHHHHTCC-TTSSTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEEET
T ss_pred CeEEEEeCccCCCCCCHHHHHHHHHHHhcc-chhccCCEEEEEecCCCCchhHhHHHHHHHHHHHHCCCeEeECcEEEec
Confidence 468999999999999999999999998543 2348999999999999999999999999999999999999999999998
Q ss_pred CC-CcHhhHHHHHHHHhHHHHhhhCCCCCCCCcCCCccccccceEEEEecC--CCccccccc---cCC--------CCCC
Q 008757 81 DQ-CIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEYRVVFYDN--ADASVGEKS---WGN--------ANGH 146 (554)
Q Consensus 81 ~~-~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~--------~~~~ 146 (554)
+. +.+++|++|.+.||++|.+.+..+... .. ..+.+++...+. ......+.. ... .+..
T Consensus 179 ~~~~~~~~~~~W~~~l~~~l~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (682)
T 2bpo_A 179 GAGTTDEDYMAWKDSILEVLKDELHLDEQE-AK------FTSQFQYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQL 251 (682)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHTTCCCCC-CC------CCCSBCCEECSSCCTTSCSSCSSGGGSTTSCCCCCTTCCBC
T ss_pred CCcccHHHHHHHHHHHHHHHHhhcCCcccc-cc------cCCcceeEecccCCccccccCcccccccccccccccccccc
Confidence 74 789999999999999999887532211 01 112233322211 000000000 000 0112
Q ss_pred cccCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCC
Q 008757 147 AVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDK 226 (554)
Q Consensus 147 ~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~ 226 (554)
..++..+|+.++|+.+++|+. +++++|+||+|++++++++|+|||+|+|||.|+++.|+++|++||+++|+.|+++...
T Consensus 252 ~~~~~~~p~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~~~ 330 (682)
T 2bpo_A 252 GPFDLSQPYIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLD 330 (682)
T ss_dssp SCCBTTBCCCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCBSS
T ss_pred CcccCCCceEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEecCC
Confidence 245667899999999999998 8899999999999888999999999999999999999999999999999999886432
Q ss_pred CCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHH
Q 008757 227 EDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLL 305 (554)
Q Consensus 227 ~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~ 305 (554)
. ..+.|+| |+|++++|++|+||+++|++.||+.||.||+|+++|++|++|+ +|++.|.+|+...+++++
T Consensus 331 ~--------~~~~p~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i~ 400 (682)
T 2bpo_A 331 P--------TVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIA 400 (682)
T ss_dssp T--------TCCCSSCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCHH
T ss_pred c--------ccCCCCCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCHH
Confidence 1 2345788 9999999999999999999999999999999999999999999 699999999999999999
Q ss_pred HHHhhCC----CCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCC---CCcccCccchhhhccCCC
Q 008757 306 EVMSEFP----SAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPT---GRVHKGLCSTWMKNSLPM 378 (554)
Q Consensus 306 d~l~~fp----~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~---g~~~~G~~S~~L~~l~~~ 378 (554)
|+|.+|| ++++|+++++..+ |+++||+|||||+|..+++.++|+|+++.+.++. ++.+.|+||+||+++.++
T Consensus 401 dvL~~fp~~~~s~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g 479 (682)
T 2bpo_A 401 DALKYLSDGAKWDTVPMQFLVESV-PQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLA 479 (682)
T ss_dssp HHHHHHHTTCCCTTSCHHHHHHHS-CBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHH
T ss_pred HHHHhccCcccccCCCHHHHHHhC-cccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhcccc
Confidence 9999999 8899999999765 9999999999999987789999999988777765 677899999999987652
Q ss_pred -----------CcCC---------CCceeeEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHh------hc
Q 008757 379 -----------EKSN---------DCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQE------AG 432 (554)
Q Consensus 379 -----------~~~~---------~~~~~~v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~------~~ 432 (554)
++.. .+..++++++.+.|++|.++.+|+||||+||||||||||++++...+. .+
T Consensus 480 ~~~~~~~~~~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g 559 (682)
T 2bpo_A 480 QNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNN 559 (682)
T ss_dssp HTTCCTTTSCCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----C
T ss_pred cccccccccccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhccccccccc
Confidence 1111 013577888888999998888999999999999999999999987654 23
Q ss_pred CCCCCeEEEEcccCCCCCCCcHHHHHHHH-HcCCcCeEEEEEcc-CCCCcccchhhhcccHHHHHHHHhCCCEEEEecCC
Q 008757 433 AELGPSLLFFGCRNRKMDYIYEDELNNFV-QSGALSQLIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDA 510 (554)
Q Consensus 433 ~~~~~~~L~~G~R~~~~d~ly~del~~~~-~~~~~~~l~~a~Sr-~~~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~ 510 (554)
...++++||||||++ .|++|++||++|+ +.+.+++++++||| ++..++||||+|.++.+.+++++.+++.||||||+
T Consensus 560 ~~~~~~~L~fG~R~~-~D~ly~dEl~~~~~~~g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGpa 638 (682)
T 2bpo_A 560 VSLGKHILFYGSRNT-DDFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDA 638 (682)
T ss_dssp CCCCCEEEEEEESSS-SSCTTTTTHHHHHHHHGGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEECS
T ss_pred CCcCCEEEEEecCCh-hhhhhHHHHHHHHHhcCCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCCc
Confidence 335899999999999 4999999999994 55777799999999 56679999999999999999988788999999996
Q ss_pred cchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeeEeeC
Q 008757 511 KSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 511 ~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
++|+++|.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 639 ~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 639 KGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred hHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 79999999999999999999999999999999999999999999
No 3
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=9.6e-95 Score=810.25 Aligned_cols=536 Identities=32% Similarity=0.591 Sum_probs=446.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc----------------------------------------CCCccCCcee
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE----------------------------------------GGEWLQKLKY 40 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~----------------------------------------~~~~l~~~~~ 40 (554)
+.+||++||||+|+||+|++.|+++|.... ....|++++|
T Consensus 59 ~~vl~vtsT~G~Gdpp~n~~~F~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~~L~~~~~ 138 (688)
T 1tll_A 59 ALVLVVTSTFGNGDPPENGEKFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDLRDNFESTGPLANVRF 138 (688)
T ss_dssp SEEEEEECCBTTTBCCGGGHHHHHHHHHHTC-----CCCCCHHHHTSCCC----------------------CTTTTCEE
T ss_pred ceEEEEEcccCCCcCCHHHHHHHHHHHhccCCccccccccccccccccccccccccccccccccccccccccccCCCCeE
Confidence 368999999999999999999999998431 0235899999
Q ss_pred eEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHHHHHHHhHHHHhhhCCCCCCCCcC-------
Q 008757 41 GVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVS------- 113 (554)
Q Consensus 41 avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~~~~~~~~~~~------- 113 (554)
||||||||+|++||++++.+|++|+++||++|++++++|+..+.+++|++|.+.+|+++.+.+..........
T Consensus 139 aVfGlGds~Y~~F~~~~k~ld~~L~~lGa~rl~~~~~~D~~~g~e~~f~~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 218 (688)
T 1tll_A 139 SVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEKPNNSLIS 218 (688)
T ss_dssp EEEEEECTTSSSTTHHHHHHHHHHHHTTCEESSCCEEEETTTTHHHHHHHHHHHHHHHHHHHHTCCSSSCCC-------C
T ss_pred EEEeeccCchHHHHHHHHHHHHHHHHcCCceeecceeeccCCCcHHHHHHHHHHHHHHHHHhcCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999888999999999999999998874322110000
Q ss_pred CCccccccceEEEEecCCCccccccccCCCCCCcccCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCC-CccccCCC
Q 008757 114 TPYTAAISEYRVVFYDNADASVGEKSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT-GLTYETGD 192 (554)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~-~~~y~~GD 192 (554)
.......+.+++......... . .....++..+|+.++|+.|++|+.++++++++||+|+++++ +++|+|||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD 290 (688)
T 1tll_A 219 NDRSWKRNKFRLTYVAEAPDL--T------QGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGD 290 (688)
T ss_dssp CSSSCCTTTEEEEECSCCCCH--H------HHHHHHTTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTC
T ss_pred cccccCCcceEEecccccccc--c------ccccccccCCceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCC
Confidence 000011223444332111000 0 00011334578999999999999999999999999999764 79999999
Q ss_pred eEEEeecCCHHHHHHHHHHcCC--CCCcEEEEeeCCCCCCCCC---CCCCCCCCCcchHHHHHhhcccccCCCCHHHHHH
Q 008757 193 HVGVYCENLSETVEEALSLLGL--SPDTYFSLHTDKEDGTPLG---KSTLPPTFPPCSLRTALTKYADLLSSPKKSALLA 267 (554)
Q Consensus 193 ~l~i~p~N~~~~V~~~l~~l~l--~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~ 267 (554)
+|+|+|+|+++.|+++|++|++ ++|+.|++........+.+ ....+.++||+|++++|++|+||+++|++.||+.
T Consensus 291 ~l~V~P~N~~~~V~~~l~~l~~~~~~d~~v~~~~~~~~~~p~~~~~~~~~~~~~p~~tl~~~l~~~lDi~~~p~~~~l~~ 370 (688)
T 1tll_A 291 HLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQ 370 (688)
T ss_dssp EEEECCCCCHHHHHHHHTTCSSCCCSCSCEEEEEEEECCCSSSCCEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHhCCCCCCCeEEEEeccccccCCCcccccccccCCCCCccHHHHHHhheeCCCCCCHHHHHH
Confidence 9999999999999999999986 6789998864321111111 0122346678999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHhhCCCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeE
Q 008757 268 LAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRI 347 (554)
Q Consensus 268 la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i 347 (554)
||.||+|+++|++|++|++ +++.|.+|+...+++++|+|.+||++++|+++++..+ |++++|+|||||+|..+++.+
T Consensus 371 la~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~~~i~evl~~fps~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i 447 (688)
T 1tll_A 371 FASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEV 447 (688)
T ss_dssp HHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEEBCSCTTTSTTEE
T ss_pred HHHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcCCCHHHHHHhCCCcCCCHHHHHHhC-cccceeEEeecCCcccCCCeE
Confidence 9999999999999999996 7889999999999999999999999999999999765 999999999999998667899
Q ss_pred EEEEEEEEeeCCC--CCcccCccchhhhccCCCCcCCCCceeeEEEe-cCCCCCCCCCCCCeEEEccCCccchhHHHHHH
Q 008757 348 HVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR-QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQE 424 (554)
Q Consensus 348 ~l~v~~v~~~~~~--g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~-~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~ 424 (554)
+|+|+++.+.++. |+.+.|.||+||+++.+|+ .+.|.++ .|.|++|.+..+|+||||+|||||||+||+++
T Consensus 448 ~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd------~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~ 521 (688)
T 1tll_A 448 HLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADD------VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQ 521 (688)
T ss_dssp EEEEECCEEETGGGTSCEEECHHHHHHTTCCTTS------EEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHH
T ss_pred EEEEEEEEEecCCCCCCcCCCchhHHHHhCCCCC------EEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHH
Confidence 9999988776654 3567899999999876643 4788885 45899998878999999999999999999999
Q ss_pred HHHHHh-hcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEEccCCCC-cccchhhhccc-HHHHHHHH-hC
Q 008757 425 RFALQE-AGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT-KEYVQHKMMEK-SSDIWNML-SE 500 (554)
Q Consensus 425 ~~~~~~-~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~-~~yVqd~l~~~-~~~v~~~l-~~ 500 (554)
+....+ .+...++++||||||+++.|++|++||++|.+.+.+++++++|||++.. ++|||++|.++ .+.+++++ ..
T Consensus 522 ~~~~~~~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~ 601 (688)
T 1tll_A 522 RQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQ 601 (688)
T ss_dssp HHHHHHHSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTS
T ss_pred HHHhhhhccCCCCCEEEEEEeccchhhhhHHHHHHHHHHcCCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccC
Confidence 876532 1223578999999999876899999999999988887899999998754 89999999988 77888776 57
Q ss_pred CCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeeEeeC
Q 008757 501 GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 501 ~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
+++|||||| ++|+++|.++|.+++++++|++.++|++|+++|+.++||++|+|
T Consensus 602 ~~~vYvCGp-~~M~~~V~~~L~~i~~~~gg~~~~~a~~~l~~l~~~~ry~~Evf 654 (688)
T 1tll_A 602 GGHIYVCGD-VTMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 654 (688)
T ss_dssp CCEEEEEEE-HHHHHHHHHHHHHHHHTTTCCCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEeCC-HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhhcCCEEEEec
Confidence 899999999 78999999999999999999999999999999999999999998
No 4
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=2.1e-84 Score=691.56 Aligned_cols=428 Identities=41% Similarity=0.766 Sum_probs=377.3
Q ss_pred cccceEEEEecCCCc---cccccc--cCCCCCCcccCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCe
Q 008757 119 AISEYRVVFYDNADA---SVGEKS--WGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDH 193 (554)
Q Consensus 119 ~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~ 193 (554)
..++|++...+..+. +..+.. ....++..+++.++|+.|+|++|++||. +++++|+||+||+++++++|+|||+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~ge~~~~~~~~~~~~~~~~~~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD~ 100 (458)
T 3qfs_A 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDH 100 (458)
T ss_dssp --CCEEEEECTTCCGGGCBSSCSSSTTTTTSCCSCCCSSSCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCE
T ss_pred ceeceEEEEccCccccccccCChhhcccccccCCCCCCCCCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCCE
Confidence 456788887654332 122221 1234456678889999999999999997 5789999999999988999999999
Q ss_pred EEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhC
Q 008757 194 VGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHA 272 (554)
Q Consensus 194 l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~ 272 (554)
|+|||.|+++.|+++|++||+++|+.+++...... ...+.|+| |+|++++|++|+||+++|++.||+.||.||
T Consensus 101 l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~------~~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la~~a 174 (458)
T 3qfs_A 101 VAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYA 174 (458)
T ss_dssp EEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTT------CSCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGB
T ss_pred EEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCcc------cccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999753321 12345788 999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcC--ccCHHHHHHHHHhcCCCHHHHHhhCCCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEE
Q 008757 273 SDPTEADRLRHLAS--PAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVT 350 (554)
Q Consensus 273 ~~~~~k~~L~~l~~--~~g~~~~~~~~~~~~~~~~d~l~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~ 350 (554)
+|+.+|++|++|++ ++|++.|++|+.+.+++++|||.+||++++|+++|++.+ |+++||+|||||+|..+++.++|+
T Consensus 175 ~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ildvL~~fps~~~p~~~ll~~l-p~l~pR~YSIsSsp~~~~~~i~lt 253 (458)
T 3qfs_A 175 SEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHIC 253 (458)
T ss_dssp CSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEE
T ss_pred CCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHHhhC-CCCcceeEeeccCcccCCCEEEEE
Confidence 99999999999987 478899999999999999999999999999999999875 999999999999998778999999
Q ss_pred EEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHh
Q 008757 351 CALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQE 430 (554)
Q Consensus 351 v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~ 430 (554)
|++|.+.++.|+.+.|+||+||+++.++++......++++++.|.|++|.++.+|+||||+|||||||+||++++....+
T Consensus 254 V~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~~~~~~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~ 333 (458)
T 3qfs_A 254 AVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQ 333 (458)
T ss_dssp EECCEEECTTSCEEECHHHHHHHTCCSSCSSCCCCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCCchhHHHHhhccCCccCCceEEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHh
Confidence 99998888888999999999999998876432222578899999999998888999999999999999999999875544
Q ss_pred hcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEEccCCCCcccchhhhcccHHHHHHHHhCCCEEEEecCC
Q 008757 431 AGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDA 510 (554)
Q Consensus 431 ~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~ 510 (554)
.+...++++||||||+...|++|++||++|.+.+.+++++++|||++..++|||++|.++.+.+++++.+++.||||||+
T Consensus 334 ~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~g~l~~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~ 413 (458)
T 3qfs_A 334 QGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDA 413 (458)
T ss_dssp HTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEET
T ss_pred cCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHcCCCCEEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCC
Confidence 44345789999999997559999999999999988888999999998889999999999999999988889999999995
Q ss_pred cchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeeEeeC
Q 008757 511 KSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 511 ~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
..|+++|.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 414 ~~M~~~V~~~L~~i~~~~g~~~~~~A~~~~~~l~~~~RY~~Dvw 457 (458)
T 3qfs_A 414 RNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVW 457 (458)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeEEEec
Confidence 68999999999999999999999999999999999999999999
No 5
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=1.2e-79 Score=668.68 Aligned_cols=407 Identities=34% Similarity=0.626 Sum_probs=352.8
Q ss_pred CCcccCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCC--CcEEEE
Q 008757 145 GHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP--DTYFSL 222 (554)
Q Consensus 145 ~~~~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~--~~~~~~ 222 (554)
+..+++..+|+.++|+.|++|+.++++++|+||+||+++.+++|+|||+|+|+|.|+++.|+++|++||+++ +..|.+
T Consensus 105 ~~~~~~~~~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~~ 184 (539)
T 2qtl_A 105 QVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVLL 184 (539)
T ss_dssp --------CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEEE
T ss_pred ccCCCCCCCCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEEE
Confidence 344677889999999999999999999999999999998889999999999999999999999999999985 567777
Q ss_pred eeCCCCCCCCCCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcC
Q 008757 223 HTDKEDGTPLGKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQ 301 (554)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~ 301 (554)
........ .+...|+++| ++|++++|++|+||+++|++.||+.||.||+|+++|++|++|++++|++.|++|+.+.+
T Consensus 185 ~~~~~~~~--~~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~ 262 (539)
T 2qtl_A 185 KIKADTKK--KGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAC 262 (539)
T ss_dssp EECTTCCC--TTCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTT
T ss_pred eccccccC--CCccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcC
Confidence 65432111 1245678888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeC--CCCCcccCccchhhhccC---
Q 008757 302 RSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKT--PTGRVHKGLCSTWMKNSL--- 376 (554)
Q Consensus 302 ~~~~d~l~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~--~~g~~~~G~~S~~L~~l~--- 376 (554)
++++|+|.+||++++|+++|++.+ |+++||+|||||+|..+++.++|+|+++.+.+ ..++.+.|+||+||+++.
T Consensus 263 ~~lldvL~~fps~~~p~~~ll~~l-p~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~ 341 (539)
T 2qtl_A 263 ACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASV 341 (539)
T ss_dssp CCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTT
T ss_pred CCHHHHHHhCCCcCCCHHHHHHhC-cCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhh
Confidence 999999999999999999999765 99999999999999766799999999886643 345668899999999983
Q ss_pred --------CCCc-CCCCceeeEEEec-CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc--CCCCCeEEEEcc
Q 008757 377 --------PMEK-SNDCSWAPIFVRQ-SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG--AELGPSLLFFGC 444 (554)
Q Consensus 377 --------~~~~-~~~~~~~~v~~~~-~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~--~~~~~~~L~~G~ 444 (554)
+|+. ...+..++|+++. +.|++|.+..+|+||||+||||||||||++++....+.+ ...++++|||||
T Consensus 342 ~~~~~~~~~Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~ 421 (539)
T 2qtl_A 342 LQPNIHASHEDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGC 421 (539)
T ss_dssp C--------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEE
T ss_pred ccccccCCCCCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEE
Confidence 3320 0011257888886 489999888899999999999999999999987654332 235899999999
Q ss_pred cCCCCCCCcHHHHHHHHHcCCcCeEEEEEccCCC------CcccchhhhcccHHHHHHHH-hCCCEEEEecCCcchHHHH
Q 008757 445 RNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP------TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDV 517 (554)
Q Consensus 445 R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~------~~~yVqd~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v 517 (554)
|+++.|++|++||++|.+.+.+++++++|||++. .++||||+|.++.+.+++++ .++++||||||+.+|+++|
T Consensus 422 R~~~~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V 501 (539)
T 2qtl_A 422 RHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDV 501 (539)
T ss_dssp SCTTTCCTTHHHHHHHHHTTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHH
Confidence 9995599999999999999988899999999876 79999999999999999988 5789999999944999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHCCCeeEeeC
Q 008757 518 HRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 518 ~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
.++|.+|++++++++.++|++|+++|+++|||++|||
T Consensus 502 ~~~L~~i~~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw 538 (539)
T 2qtl_A 502 HDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538 (539)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHCCcEEEEcC
Confidence 9999999999999999999999999999999999999
No 6
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=3.5e-78 Score=635.21 Aligned_cols=382 Identities=34% Similarity=0.614 Sum_probs=337.6
Q ss_pred CCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCCCCC
Q 008757 153 HPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 232 (554)
Q Consensus 153 ~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~~~~ 232 (554)
+++.++|+.|++||.++++++|+||+|+++ .+++|+|||+|+|+|.|+++.|+++|++||+++++.+++.....
T Consensus 5 ~~~~a~v~~n~~Lt~~~~~~~~~hie~~l~-~~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~----- 78 (393)
T 4dql_A 5 GAFSTNVVASKELQQPGSARSTRHLEIELP-KEASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEE----- 78 (393)
T ss_dssp CCEEEEEEEEEECSCTTCSCCEEEEEEECC-TTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC--------
T ss_pred CcEEEEEEeEEEcCCCCCCceEEEEEEECC-CCCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCC-----
Confidence 567899999999999999999999999997 58999999999999999999999999999999999887653211
Q ss_pred CCCCCCCCCC-cchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHhhC
Q 008757 233 GKSTLPPTFP-PCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEF 311 (554)
Q Consensus 233 ~~~~~~~~~p-~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l~~f 311 (554)
.....|++ |+|++++|++ +||+++|++.||+.||.||+|+.+|++|++|++. +.|.+++...+++++|+|.+|
T Consensus 79 --~~~~~p~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~f 152 (393)
T 4dql_A 79 --KLAHLPLAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEKY 152 (393)
T ss_dssp ----------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHHC
T ss_pred --ccccCCCCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHhC
Confidence 11123456 8999999999 9999999999999999999999999999999874 379999999999999999999
Q ss_pred CCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCC-cccCccchhhhccCCCCcCCCCceeeEE
Q 008757 312 PSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIF 390 (554)
Q Consensus 312 p~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~-~~~G~~S~~L~~l~~~~~~~~~~~~~v~ 390 (554)
|++++|+++|++.+ |+++||+|||||+|..+++.++|+|+++...++.|+ .+.|.||+||+++.+|+ .+.++
T Consensus 153 ps~~~p~~~~l~~l-p~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~Gd------~v~v~ 225 (393)
T 4dql_A 153 PACEMKFSEFIALL-PSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQEGD------TITCF 225 (393)
T ss_dssp TTCCCCHHHHHHTS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCTTC------EEEEE
T ss_pred CCCCCCHHHHHHhC-CCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCCcC------EEEEE
Confidence 99999999999765 999999999999998778999999998877665554 46799999999976653 35655
Q ss_pred Ee--cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCe
Q 008757 391 VR--QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 468 (554)
Q Consensus 391 ~~--~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~ 468 (554)
++ .|.|++|.+..+|+||||+|||||||+||++++....+.+...++++||||||++..|++|++||++|.+.+.+ +
T Consensus 226 v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~~~l-~ 304 (393)
T 4dql_A 226 ISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSEGII-T 304 (393)
T ss_dssp EECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHTTSC-E
T ss_pred EEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhCCCe-E
Confidence 54 58899998888999999999999999999999876655554457899999999965599999999999988766 7
Q ss_pred EEEEEcc-CCCCcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCC
Q 008757 469 LIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTG 547 (554)
Q Consensus 469 l~~a~Sr-~~~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~ 547 (554)
++++||| ++..++||||++.++.+.+++++.++++||||||++.|+++|+++|.+|+++++|++.++|++|+++|+++|
T Consensus 305 l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~ 384 (393)
T 4dql_A 305 LHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKG 384 (393)
T ss_dssp EEEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCC
Confidence 9999999 566799999999999999999888899999999978999999999999999999999999999999999999
Q ss_pred CeeEeeC
Q 008757 548 RYLRDVW 554 (554)
Q Consensus 548 Ry~~dvw 554 (554)
||++|||
T Consensus 385 Ry~~dv~ 391 (393)
T 4dql_A 385 RYAKDVW 391 (393)
T ss_dssp CEEEEEE
T ss_pred CEEEEec
Confidence 9999999
No 7
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=1.3e-75 Score=624.41 Aligned_cols=396 Identities=34% Similarity=0.640 Sum_probs=346.9
Q ss_pred cCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCC-CccccCCCeEEEeecCCHHHHHHHHHHcCC--CCCcEEEEeeC
Q 008757 149 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGT-GLTYETGDHVGVYCENLSETVEEALSLLGL--SPDTYFSLHTD 225 (554)
Q Consensus 149 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~-~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l--~~~~~~~~~~~ 225 (554)
++.++|+.++|+.|++|++++++++++||+|+++++ +++|+|||+|+|+|.|+++.|+++|++|++ ++|+.|+++..
T Consensus 25 ~~~~~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~~~ 104 (435)
T 1f20_A 25 VHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEML 104 (435)
T ss_dssp HHTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEEEE
T ss_pred cccCCcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEecc
Confidence 456789999999999999999999999999999765 799999999999999999999999999976 77999988642
Q ss_pred CCCCCCCC---CCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCC
Q 008757 226 KEDGTPLG---KSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQR 302 (554)
Q Consensus 226 ~~~~~~~~---~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~ 302 (554)
.....+.+ ....+.++||+|++++|++|+||+++|++.||+.||.||+|++||++|++|++ +++.|.+|+...++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~p~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~~~~ 182 (435)
T 1f20_A 105 EERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKNP 182 (435)
T ss_dssp EEESSSTTCEEEEEECCSSCSBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHCC
T ss_pred ccccCCCCccccccccCCCCCccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhccCC
Confidence 11111111 01224566789999999999999999999999999999999999999999996 78899999999999
Q ss_pred CHHHHHhhCCCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCC--CcccCccchhhhccCCCCc
Q 008757 303 SLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTG--RVHKGLCSTWMKNSLPMEK 380 (554)
Q Consensus 303 ~~~d~l~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g--~~~~G~~S~~L~~l~~~~~ 380 (554)
+++|+|.+||++++|+++++..+ |++++|+|||||+|..+++.++|+|+++.+.++.| +.+.|.||+||+++.+|+
T Consensus 183 ~i~~vl~~fps~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd- 260 (435)
T 1f20_A 183 TMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADD- 260 (435)
T ss_dssp CHHHHHHHSTTBCBCHHHHHHHS-CBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTTC-
T ss_pred CHHHHHHhCCcCCCCHHHHHHhC-CCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCCC-
Confidence 99999999999999999999775 99999999999999866789999999887766543 567899999999876643
Q ss_pred CCCCceeeEEEe-cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHh-hcCCCCCeEEEEcccCCCCCCCcHHHHH
Q 008757 381 SNDCSWAPIFVR-QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQE-AGAELGPSLLFFGCRNRKMDYIYEDELN 458 (554)
Q Consensus 381 ~~~~~~~~v~~~-~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~-~~~~~~~~~L~~G~R~~~~d~ly~del~ 458 (554)
.+.|.++ .|.|++|.+..+|+||||+|||||||+||++++..... .+...++++||||||+++.|++|++||+
T Consensus 261 -----~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~El~ 335 (435)
T 1f20_A 261 -----VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETL 335 (435)
T ss_dssp -----EEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHH
T ss_pred -----EEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHHHHH
Confidence 4788885 56899998878999999999999999999999976421 2223579999999999876899999999
Q ss_pred HHHHcCCcCeEEEEEccCCCC-cccchhhhccc-HHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHH
Q 008757 459 NFVQSGALSQLIVAFSREGPT-KEYVQHKMMEK-SSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSK 535 (554)
Q Consensus 459 ~~~~~~~~~~l~~a~Sr~~~~-~~yVqd~l~~~-~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~ 535 (554)
+|.+.+.+++++++|||++.. ++|||++|.++ .+.+++++ ..++.|||||| ++|+++|.++|.+++.++++++.++
T Consensus 336 ~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp-~~M~~~V~~~L~~i~~~~~~~~~~~ 414 (435)
T 1f20_A 336 QAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGD-VTMAADVLKAIQRIMTQQGKLSEED 414 (435)
T ss_dssp HHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEEC-HHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHcCCccEEEEEECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCC-hhHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999988887899999998654 89999999887 77788876 57899999999 6899999999999999999999999
Q ss_pred HHHHHHHHHHCCCeeEeeC
Q 008757 536 AESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 536 a~~~~~~l~~~~Ry~~dvw 554 (554)
|++|+++|+++|||++|||
T Consensus 415 a~~~~~~l~~~~RY~~Dv~ 433 (435)
T 1f20_A 415 AGVFISRLRDDNRYHEDIF 433 (435)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEec
Confidence 9999999999999999999
No 8
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=8.8e-74 Score=598.79 Aligned_cols=368 Identities=31% Similarity=0.576 Sum_probs=332.2
Q ss_pred ccCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCC
Q 008757 148 VYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKE 227 (554)
Q Consensus 148 ~~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~ 227 (554)
.++..+|+.++|+.|++|++++++++|+||+|++++++++|+|||+|+|+|+|+++.|+++|++||+++|+.+++.
T Consensus 5 ~~~~~~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~---- 80 (374)
T 1ddg_A 5 PYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE---- 80 (374)
T ss_dssp CCBTTBCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET----
T ss_pred CCCCCCCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC----
Confidence 3566789999999999999999999999999999888999999999999999999999999999999999998873
Q ss_pred CCCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHH
Q 008757 228 DGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEV 307 (554)
Q Consensus 228 ~~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~ 307 (554)
+ .|+|++++|++|+||+ +|++.||+.||.||+|++ |++|++ +++.|.+|+. +++++|+
T Consensus 81 -~------------~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~~--~~~~~~~~~~--~~~~~~v 138 (374)
T 1ddg_A 81 -G------------KTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLVG--DKAKLQHYAA--TTPIVDM 138 (374)
T ss_dssp -T------------EEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGTT--CTHHHHHHHH--HSCHHHH
T ss_pred -C------------CCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHhc--ChHHHHHHHc--CCCHHHH
Confidence 1 1799999999999999 899999999999999974 888884 7788999986 5899999
Q ss_pred HhhCCCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhc-cCCCCcCCCCce
Q 008757 308 MSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSW 386 (554)
Q Consensus 308 l~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~~~~~~~~~~ 386 (554)
|.+||+ ++++|||+... +++.+|+|||||+|..+++.++|+|+++.+.++ |+.+.|.||+||++ +.+|+ .
T Consensus 139 l~~~p~-~~~~Gq~v~l~-~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~Gd------~ 209 (374)
T 1ddg_A 139 VRFSPA-QLDAEALINLL-RPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEG------E 209 (374)
T ss_dssp HHHSCC-CCCHHHHHHHS-CBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCSSC------E
T ss_pred HHHCCC-CCCHHHHHhhc-cCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCCCC------E
Confidence 999998 99999999765 889999999999997667899999998866655 66778999999998 65543 4
Q ss_pred eeEEEe-cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCC
Q 008757 387 APIFVR-QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA 465 (554)
Q Consensus 387 ~~v~~~-~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~ 465 (554)
+.+.++ .|.|.+|.+..+|+||||+|||||||+||++++...+ ..++++||||||+++.|++|++||++|.+.+.
T Consensus 210 v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~----~~~~~~L~~G~R~~~~d~ly~~El~~~~~~~~ 285 (374)
T 1ddg_A 210 VRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE----APGKNWLFFGNPHFTEDFLYQVEWQRYVKEGV 285 (374)
T ss_dssp EEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT----CCSCEEEEEEESCHHHHCTTHHHHHHHHHTTS
T ss_pred EEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC----CCCCEEEEEEeCCchhhhhHHHHHHHHHHhCC
Confidence 778885 4689999878899999999999999999999997653 23789999999997449999999999999988
Q ss_pred cCeEEEEEccCCCCcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 008757 466 LSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQM 545 (554)
Q Consensus 466 ~~~l~~a~Sr~~~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~ 545 (554)
+++++.+|||++..++|||++|.++.+.+++++.++++|||||++++|+++|.++|.++++++++++.++|++|+++|++
T Consensus 286 ~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~ 365 (374)
T 1ddg_A 286 LTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRV 365 (374)
T ss_dssp CCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTTHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 88999999999888999999999998899998878999999993389999999999999999999999999999999999
Q ss_pred CCCeeEeeC
Q 008757 546 TGRYLRDVW 554 (554)
Q Consensus 546 ~~Ry~~dvw 554 (554)
+|||++|||
T Consensus 366 ~~Ry~~dv~ 374 (374)
T 1ddg_A 366 ERRYQRDVY 374 (374)
T ss_dssp TTCEEEEEC
T ss_pred CCCeEEecC
Confidence 999999999
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=1.6e-36 Score=310.61 Aligned_cols=271 Identities=24% Similarity=0.448 Sum_probs=217.4
Q ss_pred CCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCC
Q 008757 150 DAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDG 229 (554)
Q Consensus 150 ~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~ 229 (554)
....++.++|+.+++++..++.+++++|+|+.++ .+.|+||+++.|.++|.. .
T Consensus 33 ~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~------------------------~-- 85 (314)
T 1fnb_A 33 KPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEG-EIPYREGQSVGVIPDGED------------------------K-- 85 (314)
T ss_dssp BTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC------------------------T--
T ss_pred CCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCC-CCCcCCCCEEEEecCCCC------------------------c--
Confidence 3455778999999999988888899999999865 489999999999876421 0
Q ss_pred CCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHh
Q 008757 230 TPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMS 309 (554)
Q Consensus 230 ~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l~ 309 (554)
.|
T Consensus 86 ----------------------------------------------------------~g-------------------- 87 (314)
T 1fnb_A 86 ----------------------------------------------------------NG-------------------- 87 (314)
T ss_dssp ----------------------------------------------------------TS--------------------
T ss_pred ----------------------------------------------------------CC--------------------
Confidence 00
Q ss_pred hCCCCCCChHHHHHHhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCce
Q 008757 310 EFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSW 386 (554)
Q Consensus 310 ~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~ 386 (554)
.+..+|+|||+|+|.. .++.++|+|+.+.+.++.|+.+.|.+|+||+++.+|+ .
T Consensus 88 -----------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd------~ 144 (314)
T 1fnb_A 88 -----------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGA------E 144 (314)
T ss_dssp -----------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTC------E
T ss_pred -----------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCC------E
Confidence 1246799999999863 2578999998765655666667799999999976643 3
Q ss_pred eeEEEecCCC-CCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc-CCCCCeEEEEcccCCCCCCCcHHHHHHHHHcC
Q 008757 387 APIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG-AELGPSLLFFGCRNRKMDYIYEDELNNFVQSG 464 (554)
Q Consensus 387 ~~v~~~~~~F-~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~ 464 (554)
+.|.++.|.| .++.+..+|+||||+|||||||++|++++......+ ...++++||||||+++ |++|.+||+++.+.+
T Consensus 145 v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~el~~l~~~~ 223 (314)
T 1fnb_A 145 VKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSS-SLLYKEEFEKMKEKA 223 (314)
T ss_dssp EEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGG-GCCSHHHHHHHHHHC
T ss_pred EEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHH-HhhhHHHHHHHHHhC
Confidence 6788887876 456555689999999999999999999986532111 1136799999999986 999999999998765
Q ss_pred C-cCeEEEEEccCCC----CcccchhhhcccHHHHHHHHh-CCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHHH
Q 008757 465 A-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAES 538 (554)
Q Consensus 465 ~-~~~l~~a~Sr~~~----~~~yVqd~l~~~~~~v~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~~ 538 (554)
. ..+++.++||+.. .++||+++|.+..+.+++.+. .++.||+||| ++|+++|.+.|.+++.+.+ . +|++
T Consensus 224 ~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~~~g-~---~~~~ 298 (314)
T 1fnb_A 224 PDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGL-KGMEKGIDDIMVSLAAAEG-I---DWIE 298 (314)
T ss_dssp TTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEEC-TTHHHHHHHHHHHHHHTTT-C---CHHH
T ss_pred CCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECC-HHHHHHHHHHHHHHHHHhC-c---hHHH
Confidence 4 4589999999743 588999999887777766553 5789999999 8999999999999998765 3 5789
Q ss_pred HHHHHHHCCCeeEeeC
Q 008757 539 MVKNLQMTGRYLRDVW 554 (554)
Q Consensus 539 ~~~~l~~~~Ry~~dvw 554 (554)
++++|+++|||++|||
T Consensus 299 ~~~~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 299 YKRQLKKAEQWNVEVY 314 (314)
T ss_dssp HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHCCcEEEecC
Confidence 9999999999999999
No 10
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=4.9e-36 Score=305.60 Aligned_cols=272 Identities=25% Similarity=0.439 Sum_probs=216.4
Q ss_pred CCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCCC
Q 008757 150 DAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDG 229 (554)
Q Consensus 150 ~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~~ 229 (554)
+...++.++|+.++++++.++.+++++|+|++++..+.|+||+++.|.++|...
T Consensus 17 ~~~~~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~-------------------------- 70 (304)
T 2bmw_A 17 RPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDK-------------------------- 70 (304)
T ss_dssp BTTBCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCT--------------------------
T ss_pred CCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcc--------------------------
Confidence 345678899999999999888999999999987656899999999998875210
Q ss_pred CCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHHh
Q 008757 230 TPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMS 309 (554)
Q Consensus 230 ~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l~ 309 (554)
.|
T Consensus 71 ----------------------------------------------------------~g-------------------- 72 (304)
T 2bmw_A 71 ----------------------------------------------------------NG-------------------- 72 (304)
T ss_dssp ----------------------------------------------------------TS--------------------
T ss_pred ----------------------------------------------------------cC--------------------
Confidence 00
Q ss_pred hCCCCCCChHHHHHHhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCC-CCcccCccchhhhccCCCCcCCCCc
Q 008757 310 EFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPT-GRVHKGLCSTWMKNSLPMEKSNDCS 385 (554)
Q Consensus 310 ~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~-g~~~~G~~S~~L~~l~~~~~~~~~~ 385 (554)
.+..+|+|||+|+|.. .++.++|+|+.+.+.++. +..+.|.||+||+++.+|+
T Consensus 73 -----------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~Gd------ 129 (304)
T 2bmw_A 73 -----------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGS------ 129 (304)
T ss_dssp -----------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCTTC------
T ss_pred -----------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCCCC------
Confidence 0236799999999852 357899998876554432 3445799999999976643
Q ss_pred eeeEEEecCCC-CCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhh--c---CCCCCeEEEEcccCCCCCCCcHHHHHH
Q 008757 386 WAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA--G---AELGPSLLFFGCRNRKMDYIYEDELNN 459 (554)
Q Consensus 386 ~~~v~~~~~~F-~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~--~---~~~~~~~L~~G~R~~~~d~ly~del~~ 459 (554)
.+.|.+|.|.| .+|.+..+|+||||+|||||||+||++++....+. + ...++++||||||+.+ |++|.+||++
T Consensus 130 ~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~~el~~ 208 (304)
T 2bmw_A 130 EVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEE 208 (304)
T ss_dssp EEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGG-GCTTHHHHHH
T ss_pred EEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChH-hcchHHHHHH
Confidence 46788887765 56655678999999999999999999997654311 1 0136899999999986 9999999999
Q ss_pred HHHcCC-cCeEEEEEccCCC----CcccchhhhcccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCH
Q 008757 460 FVQSGA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDS 533 (554)
Q Consensus 460 ~~~~~~-~~~l~~a~Sr~~~----~~~yVqd~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~ 533 (554)
+.+... ..+++.++||+.. .++|||+++.++.+.+++++ ..++.||+||| ++|+++|+++|.+++.+.+ +.
T Consensus 209 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~~~~~g-~~- 285 (304)
T 2bmw_A 209 IQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGP-PPMEEGIDAALSAAAAKEG-VT- 285 (304)
T ss_dssp HHHHCTTTEEEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-TTHHHHHHHHHHHHHHTTT-CC-
T ss_pred HHHhCCCcEEEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHHHcC-cc-
Confidence 987653 5589999999742 47899999998877777766 34789999999 8999999999999988754 43
Q ss_pred HHHHHHHHHHHHCCCeeEeeC
Q 008757 534 SKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 534 ~~a~~~~~~l~~~~Ry~~dvw 554 (554)
+++++++|+++|||++|||
T Consensus 286 --~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 286 --WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp --HHHHHHHHHHTTCEEEEEC
T ss_pred --HHHHHHHHHHcCCeEEecC
Confidence 6789999999999999999
No 11
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=2.2e-35 Score=301.64 Aligned_cols=272 Identities=24% Similarity=0.447 Sum_probs=220.4
Q ss_pred cCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCC
Q 008757 149 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 228 (554)
Q Consensus 149 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~ 228 (554)
++...|+.++|+.+++++..+...++++|+|+.+ ..+.|+||.++.|.++... .
T Consensus 28 ~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~-~~~~~~pGQ~v~l~~~~~~------------------------~- 81 (310)
T 3vo2_A 28 YKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTE-GEIPYREGQSIGIIADGED------------------------K- 81 (310)
T ss_dssp BBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECT-TCCCCCTTCEEEEECSSBC------------------------T-
T ss_pred ecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCC-CCCcccCCCEEEEECCCcC------------------------C-
Confidence 4456788999999999998877888999999964 4688999999988654200 0
Q ss_pred CCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHH
Q 008757 229 GTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVM 308 (554)
Q Consensus 229 ~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l 308 (554)
.|
T Consensus 82 -----------------------------------------------------------~g------------------- 83 (310)
T 3vo2_A 82 -----------------------------------------------------------NG------------------- 83 (310)
T ss_dssp -----------------------------------------------------------TS-------------------
T ss_pred -----------------------------------------------------------CC-------------------
Confidence 00
Q ss_pred hhCCCCCCChHHHHHHhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCc
Q 008757 309 SEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCS 385 (554)
Q Consensus 309 ~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~ 385 (554)
.++.+|+|||+|+|.. .++.++|+|+.+.+.++.|+.+.|.||+||+++.+|+
T Consensus 84 ------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd------ 139 (310)
T 3vo2_A 84 ------------------KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGA------ 139 (310)
T ss_dssp ------------------CBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCTTC------
T ss_pred ------------------CcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCCCC------
Confidence 1246799999999863 3578999998776666677777899999999976654
Q ss_pred eeeEEEecCCCC-CCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc-CCCCCeEEEEcccCCCCCCCcHHHHHHHHHc
Q 008757 386 WAPIFVRQSNFK-LPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG-AELGPSLLFFGCRNRKMDYIYEDELNNFVQS 463 (554)
Q Consensus 386 ~~~v~~~~~~F~-lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~del~~~~~~ 463 (554)
.+.|.+|.|.|. +|.+..+|+||||+|||||||++|++++....... ...++++||||||+.+ |++|.+||+++.+.
T Consensus 140 ~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~-d~~~~~el~~l~~~ 218 (310)
T 3vo2_A 140 DVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSD-SLLYKEELEKMKEM 218 (310)
T ss_dssp EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGG-GCCSHHHHHHHHHH
T ss_pred EEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChh-hcccHHHHHHHHHh
Confidence 367788877754 56566789999999999999999999987432111 1126799999999987 99999999999987
Q ss_pred CC-cCeEEEEEccCCC----CcccchhhhcccHHHHHHHHh-CCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHHHH
Q 008757 464 GA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAE 537 (554)
Q Consensus 464 ~~-~~~l~~a~Sr~~~----~~~yVqd~l~~~~~~v~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~a~ 537 (554)
.. .++++.++||++. .++|||+++.+..+.+++++. +++.||+||| ++|+++|+++|.+++.+.+ + +++
T Consensus 219 ~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp-~~M~~~v~~~L~~~~~~~g-~---~~~ 293 (310)
T 3vo2_A 219 APDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGL-KGMEKGIDDIMLNLAAKDG-I---DWM 293 (310)
T ss_dssp CTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEES-TTHHHHHHHHHHHHHHHTT-C---CHH
T ss_pred CCCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCC-HHHHHHHHHHHHHHHHHcC-c---CHH
Confidence 64 5589999999753 578999999998888888774 6899999999 8999999999999998864 3 578
Q ss_pred HHHHHHHHCCCeeEeeC
Q 008757 538 SMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 538 ~~~~~l~~~~Ry~~dvw 554 (554)
+|+++|+++|||++|||
T Consensus 294 ~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 294 QYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp HHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHCCceEEecC
Confidence 99999999999999999
No 12
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=100.00 E-value=7.1e-35 Score=307.92 Aligned_cols=273 Identities=25% Similarity=0.429 Sum_probs=218.2
Q ss_pred cCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCC
Q 008757 149 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 228 (554)
Q Consensus 149 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~ 228 (554)
+....++.++|+.+++++.+++.+++++|+|+.++..+.|+||+++.|.+++.. .
T Consensus 117 ~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~------------------------~- 171 (402)
T 2b5o_A 117 YRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED------------------------K- 171 (402)
T ss_dssp SCSSSCEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE------------------------T-
T ss_pred ccCCCCEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC------------------------c-
Confidence 344567889999999999888889999999998754589999999999876411 0
Q ss_pred CCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHH
Q 008757 229 GTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVM 308 (554)
Q Consensus 229 ~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l 308 (554)
.|
T Consensus 172 -----------------------------------------------------------~g------------------- 173 (402)
T 2b5o_A 172 -----------------------------------------------------------NG------------------- 173 (402)
T ss_dssp -----------------------------------------------------------TT-------------------
T ss_pred -----------------------------------------------------------CC-------------------
Confidence 00
Q ss_pred hhCCCCCCChHHHHHHhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCC-CCCcccCccchhhhccCCC-CcCCC
Q 008757 309 SEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTP-TGRVHKGLCSTWMKNSLPM-EKSND 383 (554)
Q Consensus 309 ~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~-~g~~~~G~~S~~L~~l~~~-~~~~~ 383 (554)
.+..+|+|||+|+|.. .++.++|+|+.+.+.++ .++...|.||+||+++.+| +
T Consensus 174 ------------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G~d---- 231 (402)
T 2b5o_A 174 ------------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTD---- 231 (402)
T ss_dssp ------------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCTTCC----
T ss_pred ------------------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCCCCc----
Confidence 0246799999999863 25789999987644443 2445679999999997665 4
Q ss_pred CceeeEEEecCCC-CCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhc-CCCCCeEEEEcccCCCCCCCcHHHHHHHH
Q 008757 384 CSWAPIFVRQSNF-KLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAG-AELGPSLLFFGCRNRKMDYIYEDELNNFV 461 (554)
Q Consensus 384 ~~~~~v~~~~~~F-~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~del~~~~ 461 (554)
.+.|..|.|.| .++.+..+|+||||+|||||||++|++++......+ ...++++||||||+.+ |++|.+||+++.
T Consensus 232 --~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~eL~~l~ 308 (402)
T 2b5o_A 232 --DVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTA-NILYKDDFEKMA 308 (402)
T ss_dssp --CEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGG-GCTTHHHHHHHH
T ss_pred --eEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHH-HhHHHHHHHHHH
Confidence 36778887775 566666789999999999999999999986532111 1136899999999986 999999999998
Q ss_pred HcCC-cCeEEEEEccCCC----CcccchhhhcccHHHHHHHHh-CCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHHH
Q 008757 462 QSGA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLS-EGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSK 535 (554)
Q Consensus 462 ~~~~-~~~l~~a~Sr~~~----~~~yVqd~l~~~~~~v~~~l~-~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~~ 535 (554)
+.+. .++++.++||+.. .++|||++|.+..+.+++++. .++.||+||| ++|+++|.+.|.+++.+.+. .
T Consensus 309 ~~~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP-~~M~~~v~~~L~~~g~~~g~----~ 383 (402)
T 2b5o_A 309 AENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGL-KGMQPPIDETFTAEAEKRGL----N 383 (402)
T ss_dssp HHCTTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-GGGHHHHHHHHHHHHHHTTC----C
T ss_pred HhCCCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECC-HHHHHHHHHHHHHHHHHcCc----h
Confidence 8754 5589999999742 578999999988778887773 5789999999 89999999999999988754 4
Q ss_pred HHHHHHHHHHCCCeeEeeC
Q 008757 536 AESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 536 a~~~~~~l~~~~Ry~~dvw 554 (554)
+++++++|+++|||++|||
T Consensus 384 ~~~~~~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 384 WEEMRRSMKKEHRWHVEVY 402 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEecC
Confidence 7889999999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=100.00 E-value=1e-33 Score=289.74 Aligned_cols=276 Identities=21% Similarity=0.328 Sum_probs=209.2
Q ss_pred CCCCeeEEEEeeeecCCCCCCCc---------EEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEE
Q 008757 151 AQHPCRSNVAVRKELHTPSSDRS---------CTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFS 221 (554)
Q Consensus 151 ~~~~~~~~v~~~~~l~~~~~~~~---------~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~ 221 (554)
...++.++|+.+++|++.++.++ +++|+|+.++..+.|+||+++.|.++|....
T Consensus 18 ~~~~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~----------------- 80 (314)
T 2rc5_A 18 KSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE----------------- 80 (314)
T ss_dssp TTBCEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHH-----------------
T ss_pred CCCCEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccc-----------------
Confidence 34577899999999998777666 9999999875558999999999998764210
Q ss_pred EeeCCCCCCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcC
Q 008757 222 LHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQ 301 (554)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~ 301 (554)
+. +. .+
T Consensus 81 -------g~------------~~--------------------------------------~~----------------- 86 (314)
T 2rc5_A 81 -------KK------------AK--------------------------------------GL----------------- 86 (314)
T ss_dssp -------HH------------HT--------------------------------------TC-----------------
T ss_pred -------cC------------cc--------------------------------------ch-----------------
Confidence 00 00 00
Q ss_pred CCHHHHHhhCCCCCCChHHHHHHhcCCCCCcccccCCCCCC---CCCeEEEEEEEEEeeCCCCCc-ccCccchhhhccCC
Q 008757 302 RSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV---APSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNSLP 377 (554)
Q Consensus 302 ~~~~d~l~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g~~-~~G~~S~~L~~l~~ 377 (554)
.+| ++.+|+|||+|+|.. .++.++|+|+++.+.++.|+. +.|.+|+||+++.+
T Consensus 87 -------~~~----------------~~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~ 143 (314)
T 2rc5_A 87 -------ADV----------------GYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKP 143 (314)
T ss_dssp -------SCC----------------BCCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCT
T ss_pred -------hhc----------------CCCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCC
Confidence 011 267899999999852 357899988876443444443 46999999999765
Q ss_pred CCcCCCCceeeEEEecCCCC-CCC-CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHH
Q 008757 378 MEKSNDCSWAPIFVRQSNFK-LPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYED 455 (554)
Q Consensus 378 ~~~~~~~~~~~v~~~~~~F~-lp~-~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~d 455 (554)
|+ .+.|..+.|.|. ++. +..+|+||||+|||||||++|++++.... .....++++||||+|+++ |++|.+
T Consensus 144 Gd------~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~-~~~~~~~v~l~~g~r~~~-d~~~~~ 215 (314)
T 2rc5_A 144 GD------EVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK-LIKFTGNITLVYGAPYSD-ELVMMD 215 (314)
T ss_dssp TC------EEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTC-SSCBCSCEEEEEEESSGG-GSCSHH
T ss_pred cC------EEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhc-ccCCCCcEEEEEEeCCHH-HHhHHH
Confidence 43 467888888765 454 45689999999999999999999986432 111236899999999987 999999
Q ss_pred HHHHHHHcCCcCeEEEEEccCC-----CCcccchhhhcccHHHHHHHHhCCCEEEEe-cCCcchHHHHHHHHHHHHHHcC
Q 008757 456 ELNNFVQSGALSQLIVAFSREG-----PTKEYVQHKMMEKSSDIWNMLSEGAYLYVC-GDAKSMARDVHRTLHTIVQEQG 529 (554)
Q Consensus 456 el~~~~~~~~~~~l~~a~Sr~~-----~~~~yVqd~l~~~~~~v~~~l~~~~~iyvC-G~~~~M~~~v~~~L~~i~~~~~ 529 (554)
||+++.+.....+++.++||+. ..++|||+++.+..+.+.+.+.....+|+| || ++|+++|++.|.+++. .
T Consensus 216 el~~l~~~~~~~~~~~~~s~~~~~~~~g~~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp-~~m~~~v~~~L~~~g~--~ 292 (314)
T 2rc5_A 216 YLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGP-KGMEKGVIEEIQKISG--N 292 (314)
T ss_dssp HHHHHHHHHSSEEEEEEETTTCBCTTTSSBCCHHHHHHHTHHHHHHHHHHTCEEEEEESS-TTTHHHHHHHHHHHHT--C
T ss_pred HHHHHHHhCCcEEEEEEECCCCCcccCCCceehhHHHHHhHHHHHHHhhcCCeEEEeCCc-HHHHHHHHHHHHHHHh--c
Confidence 9999987644558999999973 247899999988777777666333445999 98 8999999999999865 2
Q ss_pred CCCHHHHHHHHHHHHHCCCeeEeeC
Q 008757 530 SLDSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 530 ~~~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
++ .++.|+.+|+++|||++|+|
T Consensus 293 ~i---~~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 293 TG---TYEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp CS---CHHHHHHHHHHTTCEEEEEC
T ss_pred cc---hHHHHHHHHHHCCCEEEecC
Confidence 33 46789999999999999999
No 14
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=1.2e-33 Score=288.95 Aligned_cols=227 Identities=27% Similarity=0.430 Sum_probs=177.7
Q ss_pred CChHHHHHHhcCC---------CCCcccccCCCCCC---CCCeEEEEEEEEEeeCCC----CCcccCccchhhhccCCCC
Q 008757 316 PPLGVFFAAIVPR---------LQPRYYSISSSPRV---APSRIHVTCALVYEKTPT----GRVHKGLCSTWMKNSLPME 379 (554)
Q Consensus 316 ~p~~~ll~~~~p~---------~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~----g~~~~G~~S~~L~~l~~~~ 379 (554)
..+||++.+.+|. ..+|+|||||+|.. .++.++|+|+.+.+..+. ++...|.+|+||+++.+|+
T Consensus 61 ~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd 140 (311)
T 3lo8_A 61 YWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGD 140 (311)
T ss_dssp CCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTTC
T ss_pred ccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCCcC
Confidence 4567776554454 26899999999964 247899988865322221 1236799999999976543
Q ss_pred cCCCCceeeEEEecCCCCCCC--CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCC-CCCeEEEEcccCCCCCCCcHHH
Q 008757 380 KSNDCSWAPIFVRQSNFKLPA--DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-LGPSLLFFGCRNRKMDYIYEDE 456 (554)
Q Consensus 380 ~~~~~~~~~v~~~~~~F~lp~--~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~-~~~~~L~~G~R~~~~d~ly~de 456 (554)
.+.+.++.|.|.+.+ +..+|+||||+|||||||++|++++......+.. .++++||||||+.+ |++|.+|
T Consensus 141 ------~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~~e 213 (311)
T 3lo8_A 141 ------KIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSD-SLLYDEE 213 (311)
T ss_dssp ------EEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGG-GCSSHHH
T ss_pred ------EEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChH-HhhHHHH
Confidence 367888888876543 3568999999999999999999998653211111 25799999999987 9999999
Q ss_pred HHHHHHcCC-cCeEEEEEccCCC----CcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 008757 457 LNNFVQSGA-LSQLIVAFSREGP----TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSL 531 (554)
Q Consensus 457 l~~~~~~~~-~~~l~~a~Sr~~~----~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~ 531 (554)
|+++.+... ..+++.++||++. .++||++.+.+..+.+++++..++.||+||| ++|+++|++.|.+++.+.+
T Consensus 214 l~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~~~g-- 290 (311)
T 3lo8_A 214 FTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGL-KGMMPGIQDTLKKVAERRG-- 290 (311)
T ss_dssp HHHHHHHCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEEC-GGGHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHhCCCcEEEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHHhcc--
Confidence 999998764 5589999999753 4799999999887777776678899999999 8999999999999998765
Q ss_pred CHHHHHHHHHHHHHCCCeeEeeC
Q 008757 532 DSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 532 ~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
++|++|+++|+++|||++|||
T Consensus 291 --~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 291 --ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp --CCHHHHHHHHHHTTCEEEEEC
T ss_pred --HHHHHHHHHHHHCCcEEEecC
Confidence 368899999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.98 E-value=1.5e-31 Score=273.84 Aligned_cols=290 Identities=22% Similarity=0.369 Sum_probs=203.5
Q ss_pred cCCCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecCCHHHHHHHHHHcCCCCCcEEEEeeCCCC
Q 008757 149 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 228 (554)
Q Consensus 149 ~~~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N~~~~V~~~l~~l~l~~~~~~~~~~~~~~ 228 (554)
|...+|+.++|+.+.+|+.++...+|+||+|+.+ ..+.|.+|.+++|.|+..+.. .. .+
T Consensus 10 ~~~~~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~GQ~~~i~~~~~~~~-~~----~~--------------- 68 (316)
T 3jqq_A 10 YTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHN-GLFKYLEGHTCGIIPYYNELD-NN----PN--------------- 68 (316)
T ss_dssp SCSSSCEEEEEEEEEECSCTTCSCCEEEEEEECT-TCCCCCTTCEEEECTTCC---------------------------
T ss_pred ecCCCCEEEEEEeeEEccCCCCCCceEEEEEeCC-CCcceecCcEeEEECCCcccc-cc----cc---------------
Confidence 5567899999999999999998999999999985 469999999999999875532 00 00
Q ss_pred CCCCCCCCCCCCCCcchHHHHHhhcccccCCCCHHHHHHHHHhCCCHHHHHHHHHhcCccCHHHHHHHHHhcCCCHHHHH
Q 008757 229 GTPLGKSTLPPTFPPCSLRTALTKYADLLSSPKKSALLALAAHASDPTEADRLRHLASPAGKDEYAQWIVASQRSLLEVM 308 (554)
Q Consensus 229 ~~~~~~~~~~~~~p~~t~~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~g~~~~~~~~~~~~~~~~d~l 308 (554)
++.+.+- .++-++ .++ .+..++
T Consensus 69 ------~~~~~~~----------~~~~~~------------~~~---------------------------~h~~~~--- 90 (316)
T 3jqq_A 69 ------NQINKDH----------NIINTT------------NHT---------------------------NHNNIA--- 90 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------ccccccc----------cccccc------------ccc---------------------------cccccc---
Confidence 0000000 000000 000 000000
Q ss_pred hhCCCCCCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCC---CCCcccCccchhhhccCCCCcCCCCc
Q 008757 309 SEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTP---TGRVHKGLCSTWMKNSLPMEKSNDCS 385 (554)
Q Consensus 309 ~~fp~~~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~---~g~~~~G~~S~~L~~l~~~~~~~~~~ 385 (554)
...+-+...+|+|||||+|.. +.++|+|+++.+..+ .++.+.|.||+||+++.+|+
T Consensus 91 -------------~~~~~g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd------ 149 (316)
T 3jqq_A 91 -------------LSHIKKQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKIND------ 149 (316)
T ss_dssp -------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCTTC------
T ss_pred -------------cccCCCcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCC------
Confidence 001114578999999999963 679998887633221 23456799999998887654
Q ss_pred eeeEEEecCCCCCCCC---CCCCeEEEccCCccchhHHHHHHHHHHHhh------cCCCCCeEEEEcccCCCCCCCcHHH
Q 008757 386 WAPIFVRQSNFKLPAD---AKVPIIMIGPGTGLAPFRGFLQERFALQEA------GAELGPSLLFFGCRNRKMDYIYEDE 456 (554)
Q Consensus 386 ~~~v~~~~~~F~lp~~---~~~piimIa~GtGIAPf~s~l~~~~~~~~~------~~~~~~~~L~~G~R~~~~d~ly~de 456 (554)
.+.|.++.|.|.++.+ ..+|+||||+|||||||+||++++...... +...++++||||||+++ |++|.+|
T Consensus 150 ~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~e 228 (316)
T 3jqq_A 150 DIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNED-SILYLNE 228 (316)
T ss_dssp EEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGG-GCTTHHH
T ss_pred EEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHH-HhhcHHH
Confidence 3678888899999876 378999999999999999999998754211 01247899999999997 9999999
Q ss_pred HHHHHHcCC-cCeEEEEEccCC---CCcccchhhhcccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCC
Q 008757 457 LNNFVQSGA-LSQLIVAFSREG---PTKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSL 531 (554)
Q Consensus 457 l~~~~~~~~-~~~l~~a~Sr~~---~~~~yVqd~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~ 531 (554)
|+++.+... ..+++.++||++ ..++|||+.+.+..+.+++++ ..++.||+||| ++|++++++.|.+.. ++
T Consensus 229 L~~l~~~~~~~~~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP-~~m~~~v~~~l~~~G----~~ 303 (316)
T 3jqq_A 229 LEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGK-KSIRYKVMDILKSHD----QF 303 (316)
T ss_dssp HHHHHHHCTTTEEEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEEC-STHHHHHHHHHHC--------
T ss_pred HHHHHHhCCCcEEEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCC-HHHHHHHHHHHHHcC----CC
Confidence 999988743 458999999974 368999999999888888776 46899999999 899999988776543 23
Q ss_pred CHHHHHHHHHHHHHCCCeeEeeC
Q 008757 532 DSSKAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 532 ~~~~a~~~~~~l~~~~Ry~~dvw 554 (554)
+. ...+|++.|+|
T Consensus 304 ~~----------v~~~rih~E~f 316 (316)
T 3jqq_A 304 DE----------KKKKRVHVEVY 316 (316)
T ss_dssp CH----------HHHTTEEEEEC
T ss_pred cc----------cccccEEEEeC
Confidence 22 34478888876
No 16
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.91 E-value=2.3e-24 Score=213.04 Aligned_cols=184 Identities=17% Similarity=0.267 Sum_probs=142.1
Q ss_pred CCChHHHHHHhcCC-CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhh-ccCCCCcCCCCceeeEEEe
Q 008757 315 KPPLGVFFAAIVPR-LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVR 392 (554)
Q Consensus 315 ~~p~~~ll~~~~p~-~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~~~~~~~~~~~~v~~~ 392 (554)
...+||++.+.+|. ...|+|||+|+|.. .+.++|+|+.+ ..|.+|+||+ ++.+|+ .+.|..+
T Consensus 43 ~~~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk~~---------~~G~~s~~l~~~l~~Gd------~v~v~gP 106 (250)
T 1tvc_A 43 KFEPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIRVL---------PEGRFSDYLRNDARVGQ------VLSVKGP 106 (250)
T ss_dssp SCCSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEECCC---------TTSSSHHHHHHHSSSSS------EEEEEEE
T ss_pred CcCCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEEEEC---------CCCCchHHHHhcCCCCC------EEEEEcC
Confidence 34577877554454 57899999999863 46788776532 2488999996 666543 3678888
Q ss_pred cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEE
Q 008757 393 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVA 472 (554)
Q Consensus 393 ~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a 472 (554)
.|.|.++.+...++||||+|||||||++|+++....+ ...+++|+||+|+.+ |++|.+||+++.+.....+++.+
T Consensus 107 ~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~ 181 (250)
T 1tvc_A 107 LGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWT----APNETRIYFGVNTEP-ELFYIDELKSLERSMRNLTVKAC 181 (250)
T ss_dssp ECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHT----CCSCEEEEEECSSST-TCCCHHHHHHHHHHSSSCEEEEC
T ss_pred ccccccCccCCceEEEEEeccCHHHHHHHHHHHHhcC----CCceEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEE
Confidence 8999988665689999999999999999999987642 236899999999997 99999999999875555688889
Q ss_pred EccCCC----CcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 473 FSREGP----TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 473 ~Sr~~~----~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
+||+.. .++||++.+.+. +.+. ..++.+|+||| ++|+++|++.|.+.
T Consensus 182 ~s~~~~~~~g~~g~v~~~l~~~---~~~~-~~~~~vyvCGp-~~m~~~v~~~l~~~ 232 (250)
T 1tvc_A 182 VWHPSGDWEGEQGSPIDALRED---LESS-DANPDIYLCGP-PGMIDAACELVRSR 232 (250)
T ss_dssp CSSCSSCCSSSSSSSSHHHHHH---HHHS-SSSSEEEEESS-HHHHHHHHHHHHHH
T ss_pred eccCCCCcCCccceehHHHHhh---hhcc-cCCcEEEEeCC-HHHHHHHHHHHHHc
Confidence 998532 577888877642 2221 25789999999 89999999988754
No 17
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.90 E-value=2.9e-24 Score=209.73 Aligned_cols=182 Identities=16% Similarity=0.199 Sum_probs=136.8
Q ss_pred CCChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchh-hhccCCCCcCCCCceeeEEEec
Q 008757 315 KPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTW-MKNSLPMEKSNDCSWAPIFVRQ 393 (554)
Q Consensus 315 ~~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~-L~~l~~~~~~~~~~~~~v~~~~ 393 (554)
...+||++...+|....|+|||+|+|.. ++.++|+|+.+ ..|.+|++ +.++.+|+ .+.+..|.
T Consensus 29 ~~~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~~---------~~G~~s~~~~~~l~~Gd------~v~v~gP~ 92 (232)
T 1qfj_A 29 SFRAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGAS---------EINLYAKAVMDRILKDH------QIVVDIPH 92 (232)
T ss_dssp CCCTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHHHS------EEEEEEEE
T ss_pred CcCCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEEc---------cCCchhHHHHHhCCCCC------EEEEeCCc
Confidence 3457888865557778999999999863 46788877654 12666776 55555543 36788888
Q ss_pred CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEE
Q 008757 394 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 473 (554)
Q Consensus 394 ~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~ 473 (554)
|.|.++.+..++++|||+|||||||++++++....+ ...+++|+||+|+.+ |++|.+||+++.+.....+++.++
T Consensus 93 G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~ 167 (232)
T 1qfj_A 93 GEAWLRDDEERPMILIAGGTGFSYARSILLTALARN----PNRDITIYWGGREEQ-HLYDLCELEALSLKHPGLQVVPVV 167 (232)
T ss_dssp CSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHC----TTCCEEEEEEESSGG-GCTTHHHHHHHHHHCTTEEEEEEE
T ss_pred cceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhcC----CCCcEEEEEeeCCHH-HhhhHHHHHHHHHHCCCeEEEEEE
Confidence 999987665689999999999999999999987642 236899999999987 999999999998765556888999
Q ss_pred ccCCC----CcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHH-HH
Q 008757 474 SREGP----TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTL-HT 523 (554)
Q Consensus 474 Sr~~~----~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L-~~ 523 (554)
|++.. .++||++.+.+.. .+ ..++.+|+||| ++|+++|++.| .+
T Consensus 168 s~~~~~~~g~~g~v~~~~~~~~---~~--~~~~~vyvCGp-~~m~~~v~~~l~~~ 216 (232)
T 1qfj_A 168 EQPEAGWRGRTGTVLTAVLQDH---GT--LAEHDIYIAGR-FEMAKIARDLFCSE 216 (232)
T ss_dssp SSCCTTCCSEESCHHHHHHHHC---SC--CTTCEEEEESC-HHHHHHHHHHHHHH
T ss_pred cCCCCCcCCceeeHHHHHHHhc---CC--ccccEEEEECC-HHHHHHHHHHHHHH
Confidence 98643 3578877665421 01 24689999999 89999999887 44
No 18
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=99.90 E-value=6.6e-24 Score=203.46 Aligned_cols=104 Identities=28% Similarity=0.497 Sum_probs=96.4
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.+||++||||+|++|+|++.|+++|.... ..+++++||||||||++|++||.+++.++++|+++||++++|++++|+
T Consensus 88 ~~vI~~tsTyG~Ge~Pdna~~F~~~L~~~~--~~l~~~~~aVfGlGdssY~~F~~a~k~ld~~L~~lGa~~l~~~g~~D~ 165 (219)
T 3hr4_A 88 RLLLVVTSTFGNGDCPGNGEKLKKSLFMLK--ELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPMGEGDE 165 (219)
T ss_dssp SEEEEEEECBTTTBCCGGGHHHHHHHHHCC--CCSSCCEEEEEEEECTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEET
T ss_pred CeEEEEEeccCCCcCCHHHHHHHHHHHhcc--hhhcCCEEEEEeCCCcchHHHhHHHHHHHHHHHHCCCCEeeCCEEEec
Confidence 368999999999999999999999998532 248999999999999999999999999999999999999999999999
Q ss_pred CCCcHhhHHHHHHHHhHHHHhhhCCC
Q 008757 81 DQCIEDDFSAWRELVWPELDNLLRDD 106 (554)
Q Consensus 81 ~~~~~~~~~~W~~~l~~~l~~~~~~~ 106 (554)
+.+.+++|++|.+.||++|.+.++.+
T Consensus 166 ~~~~e~~~~~W~~~l~~~l~~~~~~~ 191 (219)
T 3hr4_A 166 LSGQEDAFRSWAVQTFKAACETFDVR 191 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence 88999999999999999999988643
No 19
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.89 E-value=2.4e-23 Score=210.17 Aligned_cols=182 Identities=18% Similarity=0.337 Sum_probs=135.3
Q ss_pred CCCCcccccCCCCCCCCCeEEEEEEEEEee--CC-C---CCcccCccchhhhccCCCCcCCCCceeeEEEecCCCCCCCC
Q 008757 328 RLQPRYYSISSSPRVAPSRIHVTCALVYEK--TP-T---GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPAD 401 (554)
Q Consensus 328 ~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~--~~-~---g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~~~~F~lp~~ 401 (554)
...+|+|||+|+|.. .+.++|+|+++... +. . .+...|.+|+||+++.+|+ .+.|..+.|.|.++.
T Consensus 83 ~~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~Gd------~v~v~gP~G~f~~~~- 154 (290)
T 2r6h_A 83 EETVRAYSMANYPAE-GNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGD------KVMMSGPYGDFHIQD- 154 (290)
T ss_dssp SCEEEEEECCSCTTC-CSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCTTC------EEEEEEEECCCCCCS-
T ss_pred CCcceeeeccCCCCC-CCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCCCC------EEEEEecccCCcCCC-
Confidence 456899999999863 47888887653110 00 0 1134699999999976543 367888889998863
Q ss_pred CCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEEccCCC---
Q 008757 402 AKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP--- 478 (554)
Q Consensus 402 ~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~--- 478 (554)
..+|+||||+|||||||++|++++.... ....+++||||+|+.+ |++|.+||+++.+.....+++.++||+..
T Consensus 155 ~~~~~vliagGtGitP~~s~l~~~~~~~---~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~ 230 (290)
T 2r6h_A 155 TDAEMLYIGGGAGMAPLRAQILHLFRTL---KTGRKVSYWYGARSKN-EIFYEEDFREIEREFPNFKFHIALSDPQPEDN 230 (290)
T ss_dssp SSCEEEEEEEGGGHHHHHHHHHHHHHTS---CCCSCEEEEEEESSGG-GCCSHHHHHHHHHHCTTEEEEEEESSCCGGGC
T ss_pred CCCeEEEEECccCHHHHHHHHHHHHHhc---CCCCcEEEEEEcCCHH-HHHHHHHHHHHHHhCCCeEEEEEEccCCcccC
Confidence 4688999999999999999999877532 1236899999999987 99999999999876656689999998632
Q ss_pred ---CcccchhhhcccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 479 ---TKEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 479 ---~~~yVqd~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
.++||++.+.+. .+.+.. ..++.+|+||| ++|+++|++.|.+.
T Consensus 231 ~~g~~g~v~~~~~~~--~l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 231 WTGYVGFIHQVIYDN--YLKDHDAPEDIEYYMCGP-GPMANAVKGMLENL 277 (290)
T ss_dssp CCSCBSCHHHHHHHH--TTTTCSCGGGEEEEEECC-HHHHHHHHHHHHHH
T ss_pred CCCeeEecCHHHHHh--HHhhccCcCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 367888766332 011111 23678999999 89999999988764
No 20
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.89 E-value=1.7e-23 Score=216.02 Aligned_cols=181 Identities=23% Similarity=0.283 Sum_probs=142.0
Q ss_pred CCChHHHHHHhcCC-CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhh-ccCCCCcCCCCceeeEEEe
Q 008757 315 KPPLGVFFAAIVPR-LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVR 392 (554)
Q Consensus 315 ~~p~~~ll~~~~p~-~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~~~~~~~~~~~~v~~~ 392 (554)
...+||++...+|. ..+|+|||+|+|. .+.++|+|+.+ ..|.+|+||+ ++.+|+ .+.+..|
T Consensus 138 ~~~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~~---------~~G~~S~~L~~~l~~Gd------~v~v~gP 200 (338)
T 1krh_A 138 HFLAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRNV---------PQGKMSEYLSVQAKAGD------KMSFTGP 200 (338)
T ss_dssp CCCTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEECC---------TTCHHHHHHHTTCCTTC------EEEEEEE
T ss_pred CcCCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEEEc---------CCCCchhhHhhccCCCC------EEEEECC
Confidence 34578887655565 5689999999986 57888877643 2488999996 565543 4678888
Q ss_pred cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEE
Q 008757 393 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVA 472 (554)
Q Consensus 393 ~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a 472 (554)
.|.|.++.+ .+|+||||+|||||||++++++....+ ...+++||||+|+++ |++|.++|+++.+.....+++.+
T Consensus 201 ~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~----~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~ 274 (338)
T 1krh_A 201 FGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKG----SEHPVRLVFGVTQDC-DLVALEQLDALQQKLPWFEYRTV 274 (338)
T ss_dssp ECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHC----CSSCEEEEEEESSGG-GCCCHHHHHHHHHHCTTEEEEEE
T ss_pred ccceEeCCC-CceEEEEEccccHhHHHHHHHHHHHcC----CCCeEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEEE
Confidence 899998765 489999999999999999999987642 136899999999987 99999999999876655688889
Q ss_pred EccCCC---CcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 473 FSREGP---TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 473 ~Sr~~~---~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
+|+++. .++||++.+.+. .+. ..+..+|+||| ++|++++++.|.+.
T Consensus 275 ~s~~~~~~~~~g~v~~~l~~~--~~~---~~~~~vy~CGp-~~m~~~v~~~l~~~ 323 (338)
T 1krh_A 275 VAHAESQHERKGYVTGHIEYD--WLN---GGEVDVYLCGP-VPMVEAVRSWLDTQ 323 (338)
T ss_dssp ETTCCSSSSEESCSGGGCCGG--GGG---GGCSEEEEEEE-HHHHHHHHHHHHHH
T ss_pred EecCCCCCCccCccCHHHHHh--hcc---cCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 998654 368999888642 111 25689999999 89999999988764
No 21
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.89 E-value=4.2e-24 Score=210.72 Aligned_cols=188 Identities=18% Similarity=0.213 Sum_probs=139.9
Q ss_pred CCChHHHHHHhcCC---CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEE-
Q 008757 315 KPPLGVFFAAIVPR---LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF- 390 (554)
Q Consensus 315 ~~p~~~ll~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~- 390 (554)
...+||++...+|. ...|+|||+|+|.. +.++|+|+.+ ..|.+|+||+++.+|+ .+.+.
T Consensus 30 ~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~ 92 (248)
T 1fdr_A 30 PFTAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVTV---------PDGKLSPRLAALKPGD------EVQVVS 92 (248)
T ss_dssp CCCTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEECC---------TTCSSHHHHHTCCTTC------EEEEES
T ss_pred CcCCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEEe---------CCCchhhHHHhCCCcC------EEEEec
Confidence 44678887554452 45799999999863 6788776533 2488999999876654 36677
Q ss_pred EecCCCCCCCCC-CCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcC-CcCe
Q 008757 391 VRQSNFKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSG-ALSQ 468 (554)
Q Consensus 391 ~~~~~F~lp~~~-~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~-~~~~ 468 (554)
.+.|.|.++.+. .++++|||+|||||||++++++..... ...+++|+||+|+.+ |++|.+||+++.+.. ...+
T Consensus 93 gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 167 (248)
T 1fdr_A 93 EAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLD----RFKNLVLVHAARYAA-DLSYLPLMQELEKRYEGKLR 167 (248)
T ss_dssp SCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCT----TCSEEEEEEEESSGG-GCTTHHHHHHHHHHTTTSEE
T ss_pred CCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhhC----CCCcEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcEE
Confidence 677889887653 678999999999999999999864321 136899999999987 999999999998653 3447
Q ss_pred EEEEEccCCC---CcccchhhhcccH-HHHHHH-H-hCCCEEEEecCCcchHHHHHHHH-HHHH
Q 008757 469 LIVAFSREGP---TKEYVQHKMMEKS-SDIWNM-L-SEGAYLYVCGDAKSMARDVHRTL-HTIV 525 (554)
Q Consensus 469 l~~a~Sr~~~---~~~yVqd~l~~~~-~~v~~~-l-~~~~~iyvCG~~~~M~~~v~~~L-~~i~ 525 (554)
++.++|+++. .+++|++.+.+.. +..... . ..++.+|+||| ++|+++|++.| .+..
T Consensus 168 ~~~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~~G 230 (248)
T 1fdr_A 168 IQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGN-PQMVRDTQQLLKETRQ 230 (248)
T ss_dssp EEEEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEEC-HHHHHHHHHHHHHHHC
T ss_pred EEEEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCC-HHHHHHHHHHHHHHcC
Confidence 8889998754 3688998876542 111111 1 25689999999 89999999988 6643
No 22
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.88 E-value=2.8e-23 Score=204.10 Aligned_cols=183 Identities=16% Similarity=0.285 Sum_probs=137.7
Q ss_pred CCChHHHHHHhcCCC-----CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhc-cCCCCcCCCCceee
Q 008757 315 KPPLGVFFAAIVPRL-----QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAP 388 (554)
Q Consensus 315 ~~p~~~ll~~~~p~~-----~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~~~~~~~~~~~~ 388 (554)
...+||++.+.+|.. .+|+|||+|+|. .+.++|+|+.+ ..++...|.+|+||++ +.+|+ .+.
T Consensus 33 ~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~----~~~~~~~G~~S~~l~~~l~~G~------~v~ 100 (243)
T 4eh1_A 33 DYQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKRE----GVGSDNPGLVSHYLHNNVKVGD------SVK 100 (243)
T ss_dssp CCCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECT----TTTSSSCCHHHHHHHHHCCTTC------EEE
T ss_pred CcCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEe----ecCCCCCCeehhHHHhcCCCCC------EEE
Confidence 345788875544522 469999999985 36677766532 1123356999999974 65543 467
Q ss_pred EEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCe
Q 008757 389 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 468 (554)
Q Consensus 389 v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~ 468 (554)
+..+.|.|.++ +...|+||||+|||||||++|++++..... ..++|+||+|+.+ |++|.+||+++.+.. ..+
T Consensus 101 v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~~-----~~v~l~~~~r~~~-~~~~~~el~~l~~~~-~~~ 172 (243)
T 4eh1_A 101 LYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQNK-----SGVTYLYACNSAK-EHTFAQETAQLIAQQ-GWM 172 (243)
T ss_dssp EEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTTC-----CSEEEEEEESSGG-GCTTHHHHHHHHHHH-TCE
T ss_pred EEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHcCC-----CeEEEEEEeCChh-hhhHHHHHHHHHHhC-CeE
Confidence 88888999988 567899999999999999999999876421 2399999999987 999999999998776 558
Q ss_pred EEEEEccCCC---CcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHH
Q 008757 469 LIVAFSREGP---TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIV 525 (554)
Q Consensus 469 l~~a~Sr~~~---~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~ 525 (554)
++.++|++.. .++++++.+. . +-..+..||+||| +.|+++|++.|.+..
T Consensus 173 ~~~~~s~~~~~~~~~g~~~~~~~-~------~~~~~~~vyvCGp-~~m~~~v~~~l~~~g 224 (243)
T 4eh1_A 173 QQVWYRDESADDVLQGEMQLAEL-I------LPIEDGDFYLCGP-IGFMQYVVKQLLALG 224 (243)
T ss_dssp EEEEESSCCCTTCEESSCCCTTS-C------CCTTTCEEEEEEC-HHHHHHHHHHHHHHT
T ss_pred EEEEEccCCCcccccCCccHHHe-e------ccCCCcEEEEECC-HHHHHHHHHHHHHcC
Confidence 8899998654 3566665443 1 1136789999999 899999999988654
No 23
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.88 E-value=4.2e-23 Score=202.90 Aligned_cols=168 Identities=18% Similarity=0.258 Sum_probs=130.3
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEEEecCCCCCCCCCCCCeEEE
Q 008757 330 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 409 (554)
Q Consensus 330 ~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~~~~F~lp~~~~~piimI 409 (554)
..|+|||+|+|. ..+.++|+|+.+ ..|.+|+||+++.+|+ .+.+..+.|.|.++.+..++++||
T Consensus 59 ~~R~ysi~s~~~-~~~~~~l~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~gP~G~f~~~~~~~~~~vli 122 (243)
T 2eix_A 59 IYRPYTPVSSDD-EKGYFDLIIKVY---------EKGQMSQYIDHLNPGD------FLQVRGPKGQFDYKPNMVKEMGMI 122 (243)
T ss_dssp EEEEECCCSCTT-CCSEEEEEEECC---------TTCHHHHHHHTCCTTC------EEEEEEEECSCCCCTTSSSEEEEE
T ss_pred EEeeeeecCCCC-CCCEEEEEEEEc---------CCCCcchHhhcCCCCC------EEEEECCeEEEEeCCCCCcEEEEE
Confidence 369999999985 357788877543 2488999999876654 367888889999887666899999
Q ss_pred ccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEEccCCC----Ccccchh
Q 008757 410 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGP----TKEYVQH 485 (554)
Q Consensus 410 a~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~----~~~yVqd 485 (554)
|+|||||||++++++..... ....+++|+||+|+.+ |++|.+||+++.+.....+++.++|++.. .++||++
T Consensus 123 agG~GiaP~~~~l~~l~~~~---~~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~g~~g~v~~ 198 (243)
T 2eix_A 123 AGGTGITPMLQVARAIIKNP---KEKTIINLIFANVNED-DILLRTELDDMAKKYSNFKVYYVLNNPPAGWTGGVGFVSA 198 (243)
T ss_dssp EEGGGHHHHHHHHHHHHTCT---TCCCEEEEEEEEEEGG-GCTTHHHHHHHHHHCTTEEEEEEEEECCTTCCSEESSCCH
T ss_pred ecCccHHHHHHHHHHHHhCC---CCCcEEEEEEEcCCHH-HhhHHHHHHHHHHHCCCeEEEEEeCCCCccccCcCCccCH
Confidence 99999999999999986421 1236899999999987 99999999999876555688999998532 3577775
Q ss_pred hhcccHHHHHHHH---hCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 486 KMMEKSSDIWNML---SEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 486 ~l~~~~~~v~~~l---~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
.+.+ +.+ ..++.+|+||| ++|+++|++.|.+.
T Consensus 199 ~~l~------~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~ 233 (243)
T 2eix_A 199 DMIK------QHFSPPSSDIKVMMCGP-PMMNKAMQGHLETL 233 (243)
T ss_dssp HHHH------HHSCCTTSSEEEEEESS-HHHHHHHHHHHHHH
T ss_pred HHHH------HhcCCCCCCeEEEEECC-HHHHHHHHHHHHHc
Confidence 4321 222 24578999999 89999999988764
No 24
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.88 E-value=5.8e-23 Score=216.66 Aligned_cols=181 Identities=14% Similarity=0.235 Sum_probs=138.0
Q ss_pred CCChHHHHHHhcCC-----CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhc-cCCCCcCCCCceee
Q 008757 315 KPPLGVFFAAIVPR-----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAP 388 (554)
Q Consensus 315 ~~p~~~ll~~~~p~-----~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~~~~~~~~~~~~ 388 (554)
...+||++...+|+ ...|+|||+|+|. .+.++|+|+.+ ..|.+|+||++ +.+|+ .+.
T Consensus 182 ~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~---------~~G~~S~~L~~~l~~Gd------~v~ 244 (396)
T 1gvh_A 182 EYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKRE---------EGGQVSNWLHNHANVGD------VVK 244 (396)
T ss_dssp CCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECC---------TTCHHHHHHHHTCCTTC------EEE
T ss_pred CCCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEc---------CCCcchHHHHhcCCCCC------EEE
Confidence 34578887654442 3479999999986 46788777532 24999999997 55543 467
Q ss_pred EEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCe
Q 008757 389 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 468 (554)
Q Consensus 389 v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~ 468 (554)
+..|.|.|.++.+..+|+||||+|||||||++|+++....+ ...+++|+||+|+.+ |++|.+||+++.+.....+
T Consensus 245 v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 319 (396)
T 1gvh_A 245 LVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAG----HTAQVNWFHAAENGD-VHAFADEVKELGQSLPRFT 319 (396)
T ss_dssp EEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHT----CCSCEEEEEEESCTT-TCCSHHHHHHHHHTSSSEE
T ss_pred EEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcC----CCCcEEEEEEeCCHH-HhhhHHHHHHHHHHCCCeE
Confidence 88888999997666789999999999999999999987642 136899999999997 9999999999998766668
Q ss_pred EEEEEccCCC---------Ccccchhh-hcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 469 LIVAFSREGP---------TKEYVQHK-MMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 469 l~~a~Sr~~~---------~~~yVqd~-l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
++.++|++.. ..++++.. +.+.. .+ .++.+|+||| ++|+++|++.|.+.
T Consensus 320 ~~~~~s~~~~~~~~~~~~~~~G~~~~~~l~~~~-----~~-~~~~vyvCGp-~~m~~~v~~~L~~~ 378 (396)
T 1gvh_A 320 AHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAF-----SD-PTMQFYLCGP-VGFMQFTAKQLVDL 378 (396)
T ss_dssp EEEEESSCCHHHHHHTCCSEESSCCGGGSSSCC-----CC-TTCEEEEESC-HHHHHHHHHHHHHT
T ss_pred EEEEECCCCccccccCccCccCcCCHHHHhhcc-----CC-CCCEEEEeCC-HHHHHHHHHHHHHc
Confidence 8899998642 23455443 22210 11 3789999999 89999999988753
No 25
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.88 E-value=2.8e-24 Score=214.93 Aligned_cols=203 Identities=17% Similarity=0.219 Sum_probs=145.9
Q ss_pred CCChHHHHHHhcC---CCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEE-
Q 008757 315 KPPLGVFFAAIVP---RLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF- 390 (554)
Q Consensus 315 ~~p~~~ll~~~~p---~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~- 390 (554)
...+||++...+| ....|+|||+|+|. .+.++++|..+ ..|.+|+||+++.+|+ .+.+.
T Consensus 46 ~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~ 108 (271)
T 4fk8_A 46 RFNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKV---------QNGPLTSRLQHLKVGD------PVLIGK 108 (271)
T ss_dssp CCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEES
T ss_pred CcCCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEEE---------CCCchhhHHhcCCCCC------EEEEec
Confidence 3457888755444 23479999999985 35677665432 3488999998876654 36788
Q ss_pred EecCCCCCCC-CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCC----
Q 008757 391 VRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA---- 465 (554)
Q Consensus 391 ~~~~~F~lp~-~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~---- 465 (554)
.+.|.|.++. ...++++|||+|||||||++++++...... ..+++|+||+|+.+ |++|.+||+++.+...
T Consensus 109 gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~----~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~ 183 (271)
T 4fk8_A 109 KPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER----FDKVVLTHTCRLKG-ELAYMDYIKHDLPGHEYLGD 183 (271)
T ss_dssp CCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH----CSEEEEEECCCSHH-HHHHHHHHHTCCTTCTTHHH
T ss_pred CCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCC----CCCEEEEEecCCHH-HHhHHHHHHHHHHhCccccc
Confidence 7889998875 356899999999999999999999865432 26899999999987 9999999998876643
Q ss_pred ----cCeEEEEEccCCC-CcccchhhhcccHHHHHHH-----H-hCCCEEEEecCCcchHHHHHHHHHHHHHHcCCCCHH
Q 008757 466 ----LSQLIVAFSREGP-TKEYVQHKMMEKSSDIWNM-----L-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSS 534 (554)
Q Consensus 466 ----~~~l~~a~Sr~~~-~~~yVqd~l~~~~~~v~~~-----l-~~~~~iyvCG~~~~M~~~v~~~L~~i~~~~~~~~~~ 534 (554)
..+++.++|++.. .++++++.+.+. .+.+. + .+++.+|+||| ++|+++|++.|.+.......
T Consensus 184 ~~~~~~~~~~~~s~~~~~~~G~v~~~~~~~--~l~~~~~~~~~~~~~~~v~vCGp-~~m~~~v~~~l~~~gv~~~~---- 256 (271)
T 4fk8_A 184 VIREKLVYYPTVTREEFENEGRITDLIASG--KLFTDLDMPPFSPEQDRVMLCGS-TAMLKDTTELLKKAGLVEGK---- 256 (271)
T ss_dssp HHHHHEEEEECC-------CCHHHHHHHHS--HHHHHTTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHTTCCBCB----
T ss_pred cccceEEEEEEecCCccccccccChHHhcc--hhhhhcccccCCCCCCEEEEECC-HHHHHHHHHHHHHcCCchhh----
Confidence 3468888888653 468888877543 11111 1 35789999999 89999999999875544332
Q ss_pred HHHHHHHHHHHCCCeeEeeC
Q 008757 535 KAESMVKNLQMTGRYLRDVW 554 (554)
Q Consensus 535 ~a~~~~~~l~~~~Ry~~dvw 554 (554)
+...|+|+.|.|
T Consensus 257 --------i~~~~~~~~E~y 268 (271)
T 4fk8_A 257 --------NSAPGHYVIERA 268 (271)
T ss_dssp --------TTBCBSEEEEES
T ss_pred --------cCCCCcEEEEEe
Confidence 234678887765
No 26
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.88 E-value=6.8e-23 Score=205.26 Aligned_cols=177 Identities=17% Similarity=0.234 Sum_probs=130.4
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEEEecCCCCC--------CCC
Q 008757 330 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKL--------PAD 401 (554)
Q Consensus 330 ~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~~~~F~l--------p~~ 401 (554)
.+|+|||+|+|. ..+.++|+|+.+...+..+....|.+|+||+++.+|+ .+.|..+.|.|.+ +.+
T Consensus 64 ~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd------~v~v~gP~G~~~~~~~~~f~l~~~ 136 (275)
T 1umk_A 64 VVRPYTPISSDD-DKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGD------TIEFRGPSGLLVYQGKGKFAIRPD 136 (275)
T ss_dssp EEEEECCSSCTT-CCSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEEEEETTEEEECSS
T ss_pred EEeccccCCccC-CCCeEEEEEEEeccCcccccCCCChhHHHHhcCCCCC------EEEEEcCccceEecCCcccccccc
Confidence 569999999986 3578898887652222222224599999999876654 3667777777643 321
Q ss_pred --------CCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCC-cCeEEEE
Q 008757 402 --------AKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA-LSQLIVA 472 (554)
Q Consensus 402 --------~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~-~~~l~~a 472 (554)
...|+||||+|||||||++|++++.... ....+++|+||+|+.+ |++|.+||+++.+... ..+++.+
T Consensus 137 ~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~~---~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~ 212 (275)
T 1umk_A 137 KKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDP---DDHTVCHLLFANQTEK-DILLRPELEELRNKHSARFKLWYT 212 (275)
T ss_dssp TTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTCT---TCCCEEEEEEEESSGG-GCTTHHHHHHHHHHCTTTEEEEEE
T ss_pred ccccccccCCceEEEEecCccHhHHHHHHHHHHhCC---CCCcEEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcEEEEEE
Confidence 3578999999999999999999986421 1236899999999986 9999999999987643 3478889
Q ss_pred EccCCC----CcccchhhhcccHHHHHHHH---hCCCEEEEecCCcchHH-HHHHHHHHH
Q 008757 473 FSREGP----TKEYVQHKMMEKSSDIWNML---SEGAYLYVCGDAKSMAR-DVHRTLHTI 524 (554)
Q Consensus 473 ~Sr~~~----~~~yVqd~l~~~~~~v~~~l---~~~~~iyvCG~~~~M~~-~v~~~L~~i 524 (554)
+|++.. .++||++.+.+ +.+ ..++.+|+||| ++|++ ++++.|.+.
T Consensus 213 ~s~~~~~~~~~~g~v~~~~l~------~~l~~~~~~~~vyvCGp-~~m~~~~v~~~L~~~ 265 (275)
T 1umk_A 213 LDRAPEAWDYGQGFVNEEMIR------DHLPPPEEEPLVLMCGP-PPMIQYACLPNLDHV 265 (275)
T ss_dssp ESSCCSSCSSEESSCCHHHHH------HHSCCGGGCCEEEEESC-HHHHHHTTHHHHHHH
T ss_pred EcCCCccccCccCccCHHHHH------HhcCCCCCCeEEEEECC-HHHHHHHHHHHHHHc
Confidence 998643 35677764322 122 25789999999 89999 899888764
No 27
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.87 E-value=6.4e-23 Score=204.19 Aligned_cols=171 Identities=22% Similarity=0.247 Sum_probs=129.5
Q ss_pred CChHHHHHHhcCC---CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEEEe
Q 008757 316 PPLGVFFAAIVPR---LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR 392 (554)
Q Consensus 316 ~p~~~ll~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~ 392 (554)
..+||++.+.+|. ..+|+|||+|+|.. .+.++|+|+.+ ..|.+|+||+++.+|+ .+.+..|
T Consensus 34 ~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~-~~~l~~~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~gP 97 (262)
T 1ep3_B 34 DLPGQFLHLAVPNGAMLLRRPISISSWDKR-AKTCTILYRIG---------DETTGTYKLSKLESGA------KVDVMGP 97 (262)
T ss_dssp CSTTCEEEECCSCTTCCSCEEEECCEEETT-TTEEEEEEECC---------CTTSHHHHHHTCCTTC------EEEEEEE
T ss_pred CCCCceEEEEcCCCCceeeEEEEeeeecCC-CCEEEEEEEEe---------cCCchHHHHhcCCCCC------EEEEEcc
Confidence 3567777554453 67899999998853 57788777542 2488999999876654 3678888
Q ss_pred cCC-CCCCCC-CCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEE
Q 008757 393 QSN-FKLPAD-AKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLI 470 (554)
Q Consensus 393 ~~~-F~lp~~-~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~ 470 (554)
.|. |.++.+ ..+|++|||+|||||||++|++++...+ .+++||||+|+++ |++|.+||+++... +++
T Consensus 98 ~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~------~~v~l~~~~r~~~-~~~~~~el~~l~~~----~~~ 166 (262)
T 1ep3_B 98 LGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG------CQMTILLGFASEN-VKILENEFSNLKNV----TLK 166 (262)
T ss_dssp ESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT------CEEEEEEEESSGG-GCCCHHHHHTSTTE----EEE
T ss_pred cCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC------CeEEEEEEcCCHH-HhhhHHHHhhhccC----cEE
Confidence 777 998765 4689999999999999999999987531 5799999999997 99999999886532 344
Q ss_pred EEEccCC--CCcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHH
Q 008757 471 VAFSREG--PTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHT 523 (554)
Q Consensus 471 ~a~Sr~~--~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 523 (554)
.+ ++++ ..++||++.+.+. +.+++.+|+||| ++|+++|++ |.+
T Consensus 167 ~~-~~~~~~~~~g~v~~~l~~~-------~~~~~~vyvCGp-~~m~~~v~~-l~~ 211 (262)
T 1ep3_B 167 IA-TDDGSYGTKGHVGMLMNEI-------DFEVDALYTCGA-PAMLKAVAK-KYD 211 (262)
T ss_dssp EE-ETTCSSSEESCHHHHHHHC-------CSCCSEEEEESC-HHHHHHHHH-HTT
T ss_pred EE-ECCCCCcceeehHHHHHhh-------ccCCCEEEEECC-HHHHHHHHH-HHh
Confidence 44 4432 2467888865442 335789999999 899999998 754
No 28
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.87 E-value=4.6e-23 Score=206.36 Aligned_cols=186 Identities=17% Similarity=0.223 Sum_probs=137.9
Q ss_pred CChHHHHHHhcCC----CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEE-
Q 008757 316 PPLGVFFAAIVPR----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF- 390 (554)
Q Consensus 316 ~p~~~ll~~~~p~----~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~- 390 (554)
..+||++...+|. ...|+|||+|+|. .+.++|+|+.+ ..|.+|+||+++.+|+ .+.+.
T Consensus 44 ~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~--~~~~~l~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~~ 106 (272)
T 2bgi_A 44 FRSGEFVMIGLLDDNGKPIMRAYSIASPAW--DEELEFYSIKV---------PDGPLTSRLQHIKVGE------QIILRP 106 (272)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEEECCSCTT--CSEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEEE
T ss_pred cCCCCEEEEEeccCCCCeeeeeeeeccCCC--CCeEEEEEEEc---------cCCCchhHHHhCCCCC------EEEEee
Confidence 4578887554452 3579999999986 36787766532 2488999999776654 36677
Q ss_pred EecCCCCCCCCC-CCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHH-HHHH-----c
Q 008757 391 VRQSNFKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELN-NFVQ-----S 463 (554)
Q Consensus 391 ~~~~~F~lp~~~-~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~-~~~~-----~ 463 (554)
.+.|.|.++... ..+++|||+|||||||++|+++..... ...+++|+||+|+.+ |++|.+||+ ++.+ .
T Consensus 107 gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~ 181 (272)
T 2bgi_A 107 KPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYE----KFDEVIMMHACRTVA-ELEYGRQLVEALQEDPLIGE 181 (272)
T ss_dssp EEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGT----SCSEEEEEEEESSSG-GGHHHHHHHHHHHHCTTTTT
T ss_pred CCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhcC----CCCcEEEEEEeCCHH-HhhHHHHHHHHHHhcchhhc
Confidence 678889887543 578999999999999999999865321 136899999999997 999999999 9887 2
Q ss_pred --CCcCeEEEEEccCCC-CcccchhhhcccH-HHHHHH--H-hCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 464 --GALSQLIVAFSREGP-TKEYVQHKMMEKS-SDIWNM--L-SEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 464 --~~~~~l~~a~Sr~~~-~~~yVqd~l~~~~-~~v~~~--l-~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
....+++.++||+.. .++||++.+.+.. +....+ + ..++.+|+||| ++|+++|++.|.+.
T Consensus 182 ~~~~~~~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 248 (272)
T 2bgi_A 182 LVEGKLKYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGS-LAFNVDVMKVLESY 248 (272)
T ss_dssp TSTTTEEEEEEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHTT
T ss_pred ccCCcEEEEEEecCCccccCceechHHHhhhHhhhcccccCCCCCcEEEEECC-HHHHHHHHHHHHHc
Confidence 234478889998742 4789998876542 111100 1 25689999999 89999999988653
No 29
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.87 E-value=8.9e-22 Score=207.78 Aligned_cols=170 Identities=14% Similarity=0.287 Sum_probs=131.7
Q ss_pred CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhh-ccCCCCcCCCCceeeEEEecCCCCCCCC----CC
Q 008757 329 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMK-NSLPMEKSNDCSWAPIFVRQSNFKLPAD----AK 403 (554)
Q Consensus 329 ~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~~~~~~~~~~~~v~~~~~~F~lp~~----~~ 403 (554)
..+|+|||+|+|. .+.++|+|+... ..+....|.+|+||+ ++.+|+ .+.+..|.|.|.++.+ ..
T Consensus 204 ~~~R~ySi~s~p~--~~~~~i~Vk~~~---~~~~~~~G~~S~~L~~~l~~Gd------~v~v~gP~G~f~l~~~~~~~~~ 272 (399)
T 4g1v_A 204 DALRHYSLCSAST--KNGLRFAVKMEA---ARENFPAGLVSEYLHKDAKVGD------EIKLSAPAGDFAINKELIHQNE 272 (399)
T ss_dssp CEEEEEEBSCSCC--TTCEEEEEECCC---CBTTBCCCHHHHHHHHTCCTTC------EEEEEEEECSCCCCTTTTTCSS
T ss_pred ceeeeecccCCCC--CCeEEEEEEecc---CCCCCCCCEehhHHHhCCCCCC------EEEEEecccceeeCcccccCCC
Confidence 4679999999986 467887665321 111124699999997 555543 4778888899999866 57
Q ss_pred CCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEEccCCCCcccc
Q 008757 404 VPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYV 483 (554)
Q Consensus 404 ~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~Sr~~~~~~yV 483 (554)
+|+||||+|||||||++|+++....+. .++++|+||+|+.+ |++|.++|+++.+.....+++.++|++. +++
T Consensus 273 ~~~vlIagG~GitP~~s~l~~l~~~~~----~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~~s~~~---g~~ 344 (399)
T 4g1v_A 273 VPLVLLSSGVGVTPLLAMLEEQVKCNP----NRPIYWIQSSYDEK-TQAFKKHVDELLAECANVDKIIVHTDTE---PLI 344 (399)
T ss_dssp SCEEEEEEGGGHHHHHHHHHHHHHHCT----TSCEEEEEEESSST-TSTTHHHHHHHHTTCSSEEEEEEETTTS---CCC
T ss_pred CCEEEEecceeHhHHHHHHHHHHHcCC----CCCEEEEEecCCHH-HhhhHHHHHHHHHhCCCcEEEEEEeCCC---Ccc
Confidence 899999999999999999999876431 36899999999987 9999999999998776668999999854 454
Q ss_pred hhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 484 QHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 484 qd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
+. +.+.+.+..++.+|+||| .+|+++|++.|.+.
T Consensus 345 ~~------~~l~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 345 NA------AFLKEKSPAHADVYTCGS-LAFMQAMIGHLKEL 378 (399)
T ss_dssp CH------HHHHHHSCSSCEEEEEEC-HHHHHHHHHHHHHT
T ss_pred cH------HHHHhhCCCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 42 223334445899999999 89999999998764
No 30
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.86 E-value=4.6e-23 Score=204.50 Aligned_cols=187 Identities=16% Similarity=0.186 Sum_probs=136.0
Q ss_pred CCChHHHHHHhcC---CCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEE-
Q 008757 315 KPPLGVFFAAIVP---RLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIF- 390 (554)
Q Consensus 315 ~~p~~~ll~~~~p---~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~- 390 (554)
...+||++.+.+| ....|+|||+|+|. .+.++|+|..+ ..|.+|+||+++.+|+ .+.|.
T Consensus 30 ~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~~~~~i~~~---------~~G~~s~~l~~l~~Gd------~v~v~~ 92 (257)
T 2qdx_A 30 RFKTGQFVMIGLEVDGRPLMRAYSIASPNY--EEHLEFFSIKV---------PDGPLTSRLQHLKEGD------ELMVSR 92 (257)
T ss_dssp CCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEECS
T ss_pred ccCCCCEEEEEecCCCCceeeeeEeecCCC--CCeEEEEEEEe---------CCCcchhHHHhCCCCC------EEEEec
Confidence 3457888754444 23579999999986 36777766533 3489999999876654 35666
Q ss_pred EecCCCCCCCCC-CCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHH-HHHH-----c
Q 008757 391 VRQSNFKLPADA-KVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELN-NFVQ-----S 463 (554)
Q Consensus 391 ~~~~~F~lp~~~-~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~-~~~~-----~ 463 (554)
.+.|.|.++... .+++||||+|||||||++++++....+. ..+++|+||+|+.+ |++|.+||+ ++.+ .
T Consensus 93 gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~----~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~~ 167 (257)
T 2qdx_A 93 KPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYER----YEKVILVHGVRWVS-ELAYADFITKVLPEHEYFGD 167 (257)
T ss_dssp CCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHH----CSEEEEEEEESSGG-GCTTHHHHHTTGGGCTTTHH
T ss_pred CCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCC----CCeEEEEEEcCCHH-HhHhHHHHHHHHHhchhhhc
Confidence 466888886543 5789999999999999999998765432 26899999999997 999999999 7765 1
Q ss_pred --CCcCeEEEEEccCCC-CcccchhhhcccH-HHHHHH--H-hCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 464 --GALSQLIVAFSREGP-TKEYVQHKMMEKS-SDIWNM--L-SEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 464 --~~~~~l~~a~Sr~~~-~~~yVqd~l~~~~-~~v~~~--l-~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
....+++.++|++.. .+++|++.+.+.. +....+ + ..++.+|+||| ++|+++|++.|.+.
T Consensus 168 ~~~~~~~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~ 234 (257)
T 2qdx_A 168 QVKEKLIYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGS-PSMLEETSAVLDSF 234 (257)
T ss_dssp HHHHHEEEEEEESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHT
T ss_pred cCCCcEEEEEEecCCCcccCceechhhhhhhHHHhcccccCCcCCCEEEEECC-HHHHHHHHHHHHHc
Confidence 123378889998743 4788998776531 111100 1 25689999999 89999999988753
No 31
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.86 E-value=3.1e-22 Score=211.55 Aligned_cols=189 Identities=21% Similarity=0.303 Sum_probs=137.2
Q ss_pred CCChHHHHHHhcC--C---CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhc-cCCCCcCCCCceee
Q 008757 315 KPPLGVFFAAIVP--R---LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKN-SLPMEKSNDCSWAP 388 (554)
Q Consensus 315 ~~p~~~ll~~~~p--~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~~~~~~~~~~~~ 388 (554)
...+||++...+| . ..+|+|||+|+|. .+.++|+|+.+ +.+..+.|.+|+||++ +.+|+ .+.
T Consensus 184 ~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~----~~~~~~~G~~S~~L~~~l~~Gd------~v~ 251 (403)
T 1cqx_A 184 NFEPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKRE----GGGPQPPGYVSNLLHDHVNVGD------QVK 251 (403)
T ss_dssp CCCTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECC----CBTTBCCCHHHHHHHHHCCTTC------EEE
T ss_pred CCCCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEEC----CCCCCCCCeehHHHhhCCCCCC------EEE
Confidence 3457888754444 2 2479999999986 46788777643 1112235999999995 65543 366
Q ss_pred EEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCe
Q 008757 389 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 468 (554)
Q Consensus 389 v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~ 468 (554)
+..|.|.|.++.+..+|+||||+|||||||++|+++... . ...+++|+||+|+.+ |++|.+||+++.+.....+
T Consensus 252 v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 325 (403)
T 1cqx_A 252 LAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-A----PPRQVVFVHGARNSA-VHAMRDRLREAAKTYENLD 325 (403)
T ss_dssp ECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-S----SCCCEEEEEEESCSS-SCHHHHHHHHHHHHCTTEE
T ss_pred EecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-C----CCCcEEEEEEeCChh-hCcHHHHHHHHHHhCCCcE
Confidence 777888999976667899999999999999999999864 1 236899999999997 9999999999987766568
Q ss_pred EEEEEccCCCCc----ccchh-hhcccHHHHHHH-HhCCCEEEEecCCcchHHHHHHHHHHH
Q 008757 469 LIVAFSREGPTK----EYVQH-KMMEKSSDIWNM-LSEGAYLYVCGDAKSMARDVHRTLHTI 524 (554)
Q Consensus 469 l~~a~Sr~~~~~----~yVqd-~l~~~~~~v~~~-l~~~~~iyvCG~~~~M~~~v~~~L~~i 524 (554)
++.++|++.... .|.+. ++.. +.+.+. ...++.+|+||| ++|+++|++.|.+.
T Consensus 326 ~~~~~s~~~~~~~~~~~~~~~G~i~~--~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~ 384 (403)
T 1cqx_A 326 LFVFYDQPLPEDVQGRDYDYPGLVDV--KQIEKSILLPDADYYICGP-IPFMRMQHDALKNL 384 (403)
T ss_dssp EEEEESSCCTTCCBTTTBSEESSCCG--GGSHHHHCCTTCEEEEESS-HHHHHHHHHHHHHT
T ss_pred EEEEECCCCcccccccccCcCCCcCH--HHHhhccCCCCCEEEEeCC-HHHHHHHHHHHHHc
Confidence 888999865321 12222 2221 112221 123789999999 89999999988753
No 32
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.85 E-value=5.5e-22 Score=198.05 Aligned_cols=176 Identities=14% Similarity=0.244 Sum_probs=126.4
Q ss_pred CCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCc-ccCccchhhhccCCCCcCCCCceeeEEEecCC--------CCCCC
Q 008757 330 QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRV-HKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSN--------FKLPA 400 (554)
Q Consensus 330 ~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~-~~G~~S~~L~~l~~~~~~~~~~~~~v~~~~~~--------F~lp~ 400 (554)
.+|+|||+|+|.. .+.++|+|+++. ....++. ..|.+|+||+++.+|+ .+.+..+.|. |.++.
T Consensus 60 ~~R~ySi~s~~~~-~~~~~l~vk~~~-~~~~~~~~~~G~~s~~l~~l~~Gd------~v~v~gP~G~~~~~~~g~f~l~~ 131 (270)
T 2cnd_A 60 CMRAYTPTSMVDE-IGHFDLLVKVYF-KNEHPKFPNGGLMTQYLDSLPVGS------YIDVKGPLGHVEYTGRGSFVING 131 (270)
T ss_dssp EEEEECCCSCTTC-CSEEEEEEECCC-SSCBTTBTTCCHHHHHHHHCCTTC------EEEEEEEECSEECCSSSCEEETT
T ss_pred EEEeeccCCCccC-CCEEEEEEEEec-cCcccccCCCCchhhHHhcCCCCC------EEEEECCcccceeccccceeccC
Confidence 4699999999863 578888877542 1111111 2499999998776654 3667777665 66664
Q ss_pred --CCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCC-cCeEEEEEccC-
Q 008757 401 --DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGA-LSQLIVAFSRE- 476 (554)
Q Consensus 401 --~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~-~~~l~~a~Sr~- 476 (554)
+..+|+||||+|||||||++|++++.... .....+++||||+|+.+ |++|.+||+++.+... ..+++.++|++
T Consensus 132 ~~~~~~~~vliagGtGiaP~~~~l~~l~~~~--~~~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~~s~~~ 208 (270)
T 2cnd_A 132 KQRNARRLAMICGGSGITPMYQIIQAVLRDQ--PEDHTEMHLVYANRTED-DILLRDELDRWAAEYPDRLKVWYVIDQVK 208 (270)
T ss_dssp EEECCSEEEEEEEGGGHHHHHHHHHHHHHTT--TTCCCEEEEEEEESCGG-GCTTHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred CcccCCEEEEEeccccHHHHHHHHHHHHhcC--CCCCcEEEEEEEcCCHH-HcchHHHHHHHHHHCcCcEEEEEEECCCC
Confidence 24678999999999999999999987531 11236899999999997 9999999999987643 34788888873
Q ss_pred --CC----CcccchhhhcccHHHHHHHH---hCCCEEEEecCCcchHHH-HHHHHHH
Q 008757 477 --GP----TKEYVQHKMMEKSSDIWNML---SEGAYLYVCGDAKSMARD-VHRTLHT 523 (554)
Q Consensus 477 --~~----~~~yVqd~l~~~~~~v~~~l---~~~~~iyvCG~~~~M~~~-v~~~L~~ 523 (554)
+. .++||++.+.+ +.+ ..++.+|+||| ++|+++ +++.|.+
T Consensus 209 ~~~~~~~~~~g~v~~~~l~------~~l~~~~~~~~vyvCGp-~~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 209 RPEEGWKYSVGFVTEAVLR------EHVPEGGDDTLALACGP-PPMIQFAISPNLEK 258 (270)
T ss_dssp CGGGCCCSEESSCCHHHHH------HHSCCCSSSEEEEEECC-HHHHHTTTHHHHHT
T ss_pred CCCCCcccccccCCHHHHH------HhcCCCcCCEEEEEECC-HHHHHHHHHHHHHH
Confidence 11 35777775432 122 23568999999 899986 5777654
No 33
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.83 E-value=1.6e-21 Score=199.95 Aligned_cols=173 Identities=15% Similarity=0.194 Sum_probs=129.3
Q ss_pred CChHHHHHHhcCCCCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCc-cchhhh-ccCCCCcCCCCceeeEEEec
Q 008757 316 PPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGL-CSTWMK-NSLPMEKSNDCSWAPIFVRQ 393 (554)
Q Consensus 316 ~p~~~ll~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~-~S~~L~-~l~~~~~~~~~~~~~v~~~~ 393 (554)
..+||++.+.+|....|+|||+|+|.. .+.++|+|+.+ ..|. +|+||+ ++.+|+ .+.|..|.
T Consensus 39 ~~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk~~---------~~G~g~S~~L~~~l~~Gd------~v~v~gP~ 102 (321)
T 2pia_A 39 FEAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVKRD---------SNGRGGSISFIDDTSEGD------AVEVSLPR 102 (321)
T ss_dssp CCTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEECC---------TTSCSHHHHHHHSCCTTC------EEEECCCB
T ss_pred CCCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEEEe---------cCCcchhHHHHhcCCCCC------EEEEeCCc
Confidence 457888765556568899999999863 46788777532 2377 899999 665543 36677778
Q ss_pred CCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEEE
Q 008757 394 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 473 (554)
Q Consensus 394 ~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a~ 473 (554)
|.|.++.+ .+++||||+|||||||++|+++....+ ..+++|+||+|+.+ |++|.+||+++. .+. ++.+.+
T Consensus 103 g~f~l~~~-~~~~vliagG~GItP~~s~l~~l~~~~-----~~~v~l~~~~r~~~-~~~~~~el~~l~-~~~--~~~~~~ 172 (321)
T 2pia_A 103 NEFPLDKR-AKSFILVAGGIGITPMLSMARQLRAEG-----LRSFRLYYLTRDPE-GTAFFDELTSDE-WRS--DVKIHH 172 (321)
T ss_dssp CCSCCCTT-CSEEEEEEEGGGHHHHHHHHHHHHHHC-----SSEEEEEEEESCGG-GCTTHHHHHSTT-TTT--TEEEEE
T ss_pred cccccCCC-CCCEEEEEecccHhHHHHHHHHHHHcC-----CCcEEEEEEECChh-hhHHHHHHhcCc-cCC--eEEEEE
Confidence 89998765 678999999999999999999987532 15899999999987 899999999885 222 355556
Q ss_pred ccCC-CCcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHH
Q 008757 474 SREG-PTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHT 523 (554)
Q Consensus 474 Sr~~-~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~ 523 (554)
+++. ..+.++++.+.+ ...+..+|+||| ++|+++|++.|.+
T Consensus 173 ~~~~~~g~~~~~~ll~~--------~~~~~~vyvCGP-~~m~~~v~~~l~~ 214 (321)
T 2pia_A 173 DHGDPTKAFDFWSVFEK--------SKPAQHVYCCGP-QALMDTVRDMTGH 214 (321)
T ss_dssp CTTCTTSCCCHHHHHSS--------CCTTEEEEEESC-HHHHHHHHHHTTT
T ss_pred CCCcccCccCHHHHhcc--------cCCCCEEEEECC-HHHHHHHHHHHHh
Confidence 6643 123445444432 135789999999 8999999999876
No 34
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=99.74 E-value=4.5e-18 Score=160.69 Aligned_cols=98 Identities=28% Similarity=0.713 Sum_probs=88.3
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCc-hHHHHHHHHHHHHHHHcCCcccccccccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPVGLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y-~~f~~~~~~~~~~L~~lGa~~~~~~~~~d 79 (554)
+.+||++||| +|++|+|+..|+++|.... ...|++++|||||+||++| ++||.+++.++++|+++||+++.+.+++|
T Consensus 69 d~vi~g~~Ty-~G~~p~~~~~fl~~L~~~~-~~~l~~~~~avfG~Gds~y~~~f~~a~~~l~~~L~~~Ga~~v~~~~~~d 146 (191)
T 1bvy_F 69 GAVLIVTASY-NGHPPDNAKQFVDWLDQAS-ADEVKGVRYSVFGCGDKNWATTYQKVPAFIDETLAAKGAENIADRGEAD 146 (191)
T ss_dssp SEEEEEECCB-TTBCCTTTHHHHHHHHTCC-SSCCTTCCEEEEEEECTTSGGGTTHHHHHHHHHHHTTTCCCCEEEEEEE
T ss_pred CeEEEEEeec-CCCcCHHHHHHHHHHHhcc-chhhCCCEEEEEEccCCchhhhHhHHHHHHHHHHHHCCCeEeeccEEEe
Confidence 4689999999 9999999999999997432 2348999999999999999 69999999999999999999999999998
Q ss_pred CCCCcHhhHHHHHHHHhHHHH
Q 008757 80 DDQCIEDDFSAWRELVWPELD 100 (554)
Q Consensus 80 ~~~~~~~~~~~W~~~l~~~l~ 100 (554)
++.+.+.+|++|.+.||++|.
T Consensus 147 ~~~d~e~~~~~w~~~l~~~l~ 167 (191)
T 1bvy_F 147 ASDDFEGTYEEWREHMWSDVA 167 (191)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHHhc
Confidence 866677779999999999996
No 35
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.64 E-value=3.1e-17 Score=162.07 Aligned_cols=166 Identities=14% Similarity=0.111 Sum_probs=111.5
Q ss_pred ChHHHHHHhcCC----CCCcccccCCCCCCCCCeEEEEEEEEEeeCCCCCcccCccchhhhccCCCCcCCCCceeeEEEe
Q 008757 317 PLGVFFAAIVPR----LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVR 392 (554)
Q Consensus 317 p~~~ll~~~~p~----~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~~~~~~~~~~~~v~~~ 392 (554)
.+||++.+.+|. ...|+|||+|.+. +.++|.|.++ + ..|.+|+||+++.+|+ .+.|..|
T Consensus 40 ~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~----~----~~G~~S~~l~~l~~Gd------~l~v~gP 102 (252)
T 2gpj_A 40 QESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLH----D----TDGPASSWAKTAQVGE------LIQIGGP 102 (252)
T ss_dssp CTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECC----S----SCCHHHHHHHHCCTTC------EEEEEEE
T ss_pred CCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEe----C----CCCcHHHHHhhCCCCC------EEEEecC
Confidence 468887655553 3569999999764 5666555321 1 1288899999876654 3678888
Q ss_pred cCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcCeEEEE
Q 008757 393 QSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVA 472 (554)
Q Consensus 393 ~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~~l~~a 472 (554)
.|.|.++.+ .++++|||+||||||+++|+++... ..++++|+++|+.+ |.+. |. .....+++.+
T Consensus 103 ~G~f~l~~~-~~~~lliagGtGitPi~s~l~~l~~-------~~~~~~~~~~~~~~-d~~~---l~----~~~~~~v~~~ 166 (252)
T 2gpj_A 103 GLKKLINFE-ADWFLLAGDMTALPAISVNLAKLPN-------NAVGYAVIEVLSEA-DIQP---LV----HPEHVELHWV 166 (252)
T ss_dssp ECCCCCCSS-SSEEEEEEEGGGHHHHHHHHHHSCT-------TCEEEEEEEESSGG-GCCC---CC----CCTEEEEEEE
T ss_pred CCCCcCCCC-CceEEEEcchhhHHHHHHHHHhCCC-------CCcEEEEEEECCHH-Hhhc---cc----CCCCcEEEEE
Confidence 899998754 4689999999999999999998632 14678999999876 5442 11 1222356656
Q ss_pred EccCCCC-cccchhhhcccHHHHHHHH-hCCCEEEEecCCcchHHHHHHHHH
Q 008757 473 FSREGPT-KEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLH 522 (554)
Q Consensus 473 ~Sr~~~~-~~yVqd~l~~~~~~v~~~l-~~~~~iyvCG~~~~M~~~v~~~L~ 522 (554)
++.+... ...+.+.+.+. .+ ..+..+|+||| ++|++++++.|.
T Consensus 167 ~~~~~~~~g~~~~~~l~~~------~~~~~~~~vy~CGP-~~m~~av~~~l~ 211 (252)
T 2gpj_A 167 INPEADPEGRPLVERIAQL------PWLAGEPAVWIACE-FNSMRALRRHFK 211 (252)
T ss_dssp ECSSCCTTCHHHHHHHTTS------CCCSSCEEEEEEEE-HHHHHHHHHHHH
T ss_pred eCCCCCcccHHHHHHHHhc------cCCCCCcEEEEEcC-HHHHHHHHHHHH
Confidence 5543221 12233333221 01 23568999999 899999999887
No 36
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=99.63 E-value=5.3e-16 Score=143.48 Aligned_cols=100 Identities=29% Similarity=0.436 Sum_probs=88.7
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.+||++||||.|++|++++.|+++|.... ...+++++|+|||+||++|.+||.+++.++++|+++|++++.+.+.+|
T Consensus 58 d~ii~g~pt~g~G~~p~~~~~f~~~l~~~~-~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v~~~~~~d- 135 (167)
T 1ykg_A 58 KLLIVVTSTQGEGEPPEEAVALHKFLFSKK-APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDAD- 135 (167)
T ss_dssp SEEEEEEECBGGGBCCGGGHHHHHHHTSTT-CCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEESSCCEEEC-
T ss_pred CeEEEEEcccCCCcCChhHHHHHHHHHhcc-ccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEeecceecC-
Confidence 468999999999999999999999997421 224889999999999999999999999999999999999999988887
Q ss_pred CCCcHhhHHHHHHHHhHHHHhhh
Q 008757 81 DQCIEDDFSAWRELVWPELDNLL 103 (554)
Q Consensus 81 ~~~~~~~~~~W~~~l~~~l~~~~ 103 (554)
.+.++++++|.+.++++|...+
T Consensus 136 -~~~~~~~~~w~~~l~~~l~~~~ 157 (167)
T 1ykg_A 136 -VEYQAAASEWRARVVDALKSRA 157 (167)
T ss_dssp -TTCHHHHHHHHHHHHHHHHTCC
T ss_pred -CCcHHHHHHHHHHHHHHHHhhc
Confidence 4568899999999999987654
No 37
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=99.61 E-value=7e-17 Score=146.09 Aligned_cols=97 Identities=26% Similarity=0.338 Sum_probs=86.6
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.+||++||||.|++|++++.|+++|.... ..+++++|+|||+||++|++||.+++.++++|+++||+++.+.+++|.
T Consensus 48 d~vi~g~pt~g~g~~p~~~~~f~~~l~~~~--~~l~~~~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~d~ 125 (147)
T 2hna_A 48 GIWLVISSTHGAGDIPDNLSPFYEALQEQK--PDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINI 125 (147)
T ss_dssp EEEEEECCTTTTCCTTSSCHHHHHHHHHHC--CCTTEEEEEEESCCHHHHSCSSSCTTHHHHHHHHHTCEECSSCBCCCC
T ss_pred CeEEEEECccCCCCCChhHHHHHHHHHhhc--cccCCCEEEEEecccCCHHHHHHHHHHHHHHHHHcCCeEeeeeEEEec
Confidence 368999999999999999999999997532 137899999999999999999999999999999999999999999887
Q ss_pred CC--CcHhhHHHHHHHHhHHH
Q 008757 81 DQ--CIEDDFSAWRELVWPEL 99 (554)
Q Consensus 81 ~~--~~~~~~~~W~~~l~~~l 99 (554)
.. +.++++++|.+.++++|
T Consensus 126 ~~~~~~~~~~~~w~~~~~~~l 146 (147)
T 2hna_A 126 LDHDIPEDPAEEWLGSWVNLL 146 (147)
T ss_dssp SSCCSSCSCCHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHh
Confidence 53 56788999999999876
No 38
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.61 E-value=2.6e-16 Score=147.44 Aligned_cols=132 Identities=12% Similarity=0.247 Sum_probs=87.7
Q ss_pred ecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhh---cCCCCCeEEEEcccCCCCCCC-cHHHHHHHHHc----
Q 008757 392 RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA---GAELGPSLLFFGCRNRKMDYI-YEDELNNFVQS---- 463 (554)
Q Consensus 392 ~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~---~~~~~~~~L~~G~R~~~~d~l-y~del~~~~~~---- 463 (554)
|.|.|.++....+|+||||+|||||||+++++++...... .....+++|+||+|+.+ +++ |.++|+++.+.
T Consensus 6 P~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~-~~~w~~~~l~~l~~~~~~~ 84 (186)
T 3a1f_A 6 PFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTH-AFEWFADLLQLLESQMQER 84 (186)
T ss_dssp TTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTT-TTHHHHHHHHHHHHHHHHT
T ss_pred CCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcc-hHHHHHHHHHHHHHHHhhc
Confidence 4466655433457899999999999999999998765321 12246899999999987 787 99999999865
Q ss_pred --CCcCeEEEEEccCCC---Ccccchh-----hh----------cccHHHHHH-HH---h-CCCEEEEecCCcchHHHHH
Q 008757 464 --GALSQLIVAFSREGP---TKEYVQH-----KM----------MEKSSDIWN-ML---S-EGAYLYVCGDAKSMARDVH 518 (554)
Q Consensus 464 --~~~~~l~~a~Sr~~~---~~~yVqd-----~l----------~~~~~~v~~-~l---~-~~~~iyvCG~~~~M~~~v~ 518 (554)
....++++.+|++.. .+.|++. .+ +-+.+.+.+ +. . .+..||+||| ++|+++|+
T Consensus 85 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP-~~m~~~v~ 163 (186)
T 3a1f_A 85 NNAGFLSYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGP-EALAETLS 163 (186)
T ss_dssp TCTTSEEEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESC-HHHHHHHH
T ss_pred cCCCeEEEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCC-HHHHHHHH
Confidence 223478888898532 1122221 00 111122222 21 1 3578999999 89999999
Q ss_pred HHHHHHH
Q 008757 519 RTLHTIV 525 (554)
Q Consensus 519 ~~L~~i~ 525 (554)
+.|.+..
T Consensus 164 ~~l~~~g 170 (186)
T 3a1f_A 164 KQSISNS 170 (186)
T ss_dssp HHHHHTC
T ss_pred HHHHHhh
Confidence 9987754
No 39
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.57 E-value=1.7e-15 Score=136.21 Aligned_cols=120 Identities=11% Similarity=0.042 Sum_probs=82.8
Q ss_pred eEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcC
Q 008757 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 467 (554)
Q Consensus 388 ~v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~ 467 (554)
.|..|.|.|...++ .++++|||+|+||||++|++++....+ .+++|+ |+|+++ |.+|.+||+++..+ .
T Consensus 4 ~v~GP~G~~~~~~~-~~~~llIaGG~GiaPl~sm~~~l~~~~------~~v~l~-g~R~~~-~~~~~~el~~l~~~--~- 71 (142)
T 3lyu_A 4 NVAGPLGTPVPMEK-FGKILAIGAYTGIVEVYPIAKAWQEIG------NDVTTL-HVTFEP-MVILKEELEKAVTR--H- 71 (142)
T ss_dssp ---CCCSCCBCCCC-CSEEEEEEETTHHHHHHHHHHHHHHTT------CEEEEE-EEEEGG-GCCSHHHHHTTSSE--E-
T ss_pred eeeCCCCCCccCCC-CCeEEEEECcCcHHHHHHHHHHHHhcC------CcEEEE-EeCCHH-HhhHHHHHHHHHhh--e-
Confidence 35566677765433 678999999999999999999876431 479999 999997 99999999887532 1
Q ss_pred eEEEEEccCCC--------CcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHH
Q 008757 468 QLIVAFSREGP--------TKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIV 525 (554)
Q Consensus 468 ~l~~a~Sr~~~--------~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~ 525 (554)
.+..++++... .+++|.+.+.+. ... .+...||+||| ++|+++|.+.+.+..
T Consensus 72 ~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~----~~~-~~~~~vy~CGP-~~Mm~av~~~l~~~~ 131 (142)
T 3lyu_A 72 IVEPVPLNPNQDFLANMKNVSQRLKEKVREL----LES-EDWDLVFMVGP-VGDQKQVFEVVKEYG 131 (142)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHHHHHH----HHS-SCCSEEEEESC-HHHHHHHHHHHHHHT
T ss_pred EEEEeecccccCCCCCCCCCccchhHHHHHh----ccc-CCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 23333443211 245666544321 110 24568999999 999999999887753
No 40
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.56 E-value=9.1e-16 Score=140.57 Aligned_cols=120 Identities=11% Similarity=0.039 Sum_probs=82.2
Q ss_pred eEEEecCCCCCCCCCCCCeEEEccCCccchhHHHHHHHHHHHhhcCCCCCeEEEEcccCCCCCCCcHHHHHHHHHcCCcC
Q 008757 388 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 467 (554)
Q Consensus 388 ~v~~~~~~F~lp~~~~~piimIa~GtGIAPf~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~del~~~~~~~~~~ 467 (554)
.+..|.|+|...+ ..+|++|||+||||||++|++++....+ .+++|+ |+|+++ |.+|.+||+++..+ .
T Consensus 9 ~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~~~------~~v~l~-g~r~~~-d~~~~~el~~l~~~--~- 76 (158)
T 3lrx_A 9 NVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQEIG------NDVTTL-HVTFEP-MVILKEELEKAVTR--H- 76 (158)
T ss_dssp ---CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHHHT------CEEEEE-EECBGG-GCCSHHHHHHHSSE--E-
T ss_pred EEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHhcC------CcEEEE-EeCCHH-HhhHHHHHHHHHhc--e-
Confidence 5667777755433 4679999999999999999999976432 479999 999997 99999999998642 1
Q ss_pred eEEEEEccCC--------CCcccchhhhcccHHHHHHHHhCCCEEEEecCCcchHHHHHHHHHHHH
Q 008757 468 QLIVAFSREG--------PTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIV 525 (554)
Q Consensus 468 ~l~~a~Sr~~--------~~~~yVqd~l~~~~~~v~~~l~~~~~iyvCG~~~~M~~~v~~~L~~i~ 525 (554)
.+..++++.. ..+++|++.+.+. +.+ .+...||+||| ++|+++|.+.|.+..
T Consensus 77 ~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~---l~~--~~~~~vy~CGP-~~mm~~v~~~l~~~G 136 (158)
T 3lrx_A 77 IVEPVPLNPNQDFLANMKNVSQRLKEKVREL---LES--EDWDLVFMVGP-VGDQKQVFEVVKEYG 136 (158)
T ss_dssp EECCBCCCTTSCHHHHHHHHHHHHHHHHHHH---HHH--SCCSEEEEESC-HHHHHHHHHHHGGGT
T ss_pred EEEEeeccccccCCCCCCCCcccccHHHHHh---hcc--CCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 2222233221 1246666544321 111 24578999999 999999999887643
No 41
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=99.43 E-value=8.5e-14 Score=125.67 Aligned_cols=94 Identities=19% Similarity=0.220 Sum_probs=81.2
Q ss_pred CeEEEEeccCCC--CCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccc
Q 008757 1 MKIYVIGCRYGD--GEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLG 78 (554)
Q Consensus 1 ~~~i~~~sT~g~--G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~ 78 (554)
+.+||++||||. |++|++++.|+++|... .+++++|+|||+||+.|..||.+++.++++|+++|++++.+...+
T Consensus 51 d~ii~g~pty~~~~G~~p~~~~~fl~~l~~~----~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~~~~ 126 (148)
T 3f6r_A 51 DAVLFGCSAWGMEDLEMQDDFLSLFEEFDRI----GLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEGLKM 126 (148)
T ss_dssp SEEEEEECEECSSSCEECHHHHHHHTTGGGT----CCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCCEEE
T ss_pred CEEEEEecccCCCCCCCcHHHHHHHHHhhcc----CCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecceEe
Confidence 468999999999 99999999999998742 388999999999999999999999999999999999999887776
Q ss_pred cCCCC-cHhhHHHHHHHHhHH
Q 008757 79 DDDQC-IEDDFSAWRELVWPE 98 (554)
Q Consensus 79 d~~~~-~~~~~~~W~~~l~~~ 98 (554)
+...+ ..+.+++|.+.|+.+
T Consensus 127 ~~~p~~~~~~~~~~~~~l~~~ 147 (148)
T 3f6r_A 127 EGDASNDPEAVASFAEDVLKQ 147 (148)
T ss_dssp ESSGGGCHHHHHHHHHHHHHT
T ss_pred ecCcchHHHHHHHHHHHHHhh
Confidence 65321 567788998887654
No 42
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=99.31 E-value=1.9e-12 Score=116.58 Aligned_cols=94 Identities=23% Similarity=0.284 Sum_probs=80.8
Q ss_pred CeEEEEeccCCCCC--cCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccc
Q 008757 1 MKIYVIGCRYGDGE--PTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLG 78 (554)
Q Consensus 1 ~~~i~~~sT~g~G~--~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~ 78 (554)
+.+||+++|||.|. +|++++.|+++|... .+++++++|||+||+.|..||.+.+.+++.|..+|++.+.+...+
T Consensus 50 d~ii~~~p~y~~g~~~~p~~~~~fl~~l~~~----~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~ 125 (147)
T 1f4p_A 50 DLVLLGCSTWGDDSIELQDDFIPLFDSLEET----GAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRI 125 (147)
T ss_dssp SEEEEEECEECSSSCEECTTTHHHHHTGGGS----CCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECSCCEEE
T ss_pred CEEEEEeCCCCCCCcCCChhHHHHHHHHHhc----ccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhhccccc
Confidence 46899999999999 999999999998742 388999999999999998899999999999999999999887766
Q ss_pred cCCCC-cHhhHHHHHHHHhHH
Q 008757 79 DDDQC-IEDDFSAWRELVWPE 98 (554)
Q Consensus 79 d~~~~-~~~~~~~W~~~l~~~ 98 (554)
|...+ ..+.+.+|.+.++++
T Consensus 126 ~~~p~~~~~~~~~~~~~l~~~ 146 (147)
T 1f4p_A 126 DGDPRAARDDIVGWAHDVRGA 146 (147)
T ss_dssp ESCGGGGHHHHHHHHHHHHTT
T ss_pred ccCchhHHHHHHHHHHHHHhh
Confidence 65322 566799999887654
No 43
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=99.28 E-value=5.5e-12 Score=117.71 Aligned_cols=96 Identities=21% Similarity=0.303 Sum_probs=80.2
Q ss_pred CeEEEEeccCCCCCcC--------chHHHHHHHHhhccCCCccCCceeeEEeecCCC-ch-HHHHHHHHHHHHHHHcCCc
Q 008757 1 MKIYVIGCRYGDGEPT--------DNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAK 70 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p--------~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~L~~lGa~ 70 (554)
+.|||++||||+|++| ++++.|+++|.. ..+++++|+|||+||+. |. +||.+++.++++|.++||+
T Consensus 48 d~iilg~pt~~~G~~pg~~~~~~~~~~~~fl~~l~~----~~l~gk~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~ 123 (179)
T 1yob_A 48 QFLILGTPTLGEGELPGLSSDAENESWEEFLPKIEG----LDFSGKTVALFGLGDQVGYPENYLDALGELYSFFKDRGAK 123 (179)
T ss_dssp SEEEEEEECBTTTBCSSGGGTCSSCCHHHHHHHHTT----CCCTTCEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCE
T ss_pred CEEEEEeccCCCCcCCcccccccchHHHHHHHHhhh----cccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCE
Confidence 4689999999999999 999999999863 23889999999999998 95 7999999999999999999
Q ss_pred ccccc-------------------cc-ccCC---CCcHhhHHHHHHHHhHHHH
Q 008757 71 RLVPV-------------------GL-GDDD---QCIEDDFSAWRELVWPELD 100 (554)
Q Consensus 71 ~~~~~-------------------~~-~d~~---~~~~~~~~~W~~~l~~~l~ 100 (554)
.+.+. +. .|.+ ...++.++.|.+.++++|.
T Consensus 124 ~~~~~~~~g~~~~~s~~~~~~~f~gl~~d~~~~~~~~~~~i~~w~~~l~~~~~ 176 (179)
T 1yob_A 124 IVGSWSTDGYEFESSEAVVDGKFVGLALDLDNQSGKTDERVAAWLAQIAPEFG 176 (179)
T ss_dssp EECCBCCTTCCCSCCTTBSSSSBSSEEECTTTCGGGHHHHHHHHHHHHGGGGT
T ss_pred EEEeeccCCCCcccchhhhcCceeccccCCCCCCcccHHHHHHHHHHHHHHHh
Confidence 87653 32 3432 2357789999999988764
No 44
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=99.28 E-value=3.9e-12 Score=118.98 Aligned_cols=99 Identities=20% Similarity=0.378 Sum_probs=82.3
Q ss_pred CeEEEEeccCCCCCcC--------chHHHHHHHHhhccCCCccCCceeeEEeecCCC-ch-HHHHHHHHHHHHHHHcCCc
Q 008757 1 MKIYVIGCRYGDGEPT--------DNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAK 70 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p--------~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~L~~lGa~ 70 (554)
+.|||+++|||.|++| ++++.|+++|.. ..+++++|+|||+||+. |. +||.+++.++++|.++||+
T Consensus 49 d~ii~g~pty~~G~~pg~~~~~~~~~~~~f~~~l~~----~~l~gk~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~ 124 (182)
T 2wc1_A 49 DFLILGTPTLGDGQLPGLSANAASESWEEFLPRIAD----QDFSGKTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGAN 124 (182)
T ss_dssp SEEEEEEECBTTTBCSSGGGTCSSCCHHHHGGGGTT----CCCTTCEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCE
T ss_pred CeEEEEEeeCCCCCCCccccccchhHHHHHHHHhhh----ccCCCCEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCE
Confidence 4789999999999999 999999998863 23889999999999998 95 8999999999999999999
Q ss_pred ccccc-------------------ccc-cCCC---CcHhhHHHHHHHHhHHHHhhh
Q 008757 71 RLVPV-------------------GLG-DDDQ---CIEDDFSAWRELVWPELDNLL 103 (554)
Q Consensus 71 ~~~~~-------------------~~~-d~~~---~~~~~~~~W~~~l~~~l~~~~ 103 (554)
.+.+. |.+ |.++ ..++.++.|.+.|+++|...+
T Consensus 125 ~v~~~~~~g~~~~~~~~~~~~~~~gl~~d~~~~~~~~~~~~~~w~~~l~~~l~~~~ 180 (182)
T 2wc1_A 125 VVGRWPAKGYGFEDSLAVVEGEFLGLALDQDNQAALTPERLKGWLSLIAADFGLVL 180 (182)
T ss_dssp EECCEECTTSCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHTHHHHTCCC
T ss_pred EEEeecCCCcCcccchhhhcCceeeeeccCCCCccccHHHHHHHHHHHHHHHhccc
Confidence 87653 443 3322 257789999999999887543
No 45
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=99.23 E-value=1.9e-11 Score=113.36 Aligned_cols=95 Identities=24% Similarity=0.369 Sum_probs=77.8
Q ss_pred CeEEEEeccCCCCCc----CchHHHHH-HHHhhccCCCccCCceeeEEeecCCC-ch-HHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEP----TDNAARFY-KWFTEKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~----p~n~~~f~-~~l~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||++||||.|++ |++++.|+ +.|... .+++++|+|||+||+. |. +||.+++.++++|.++||+.+.
T Consensus 47 d~ii~g~pt~~~G~~~~~~p~~~~~fl~~~l~~~----~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~~ 122 (173)
T 2fcr_A 47 DLLFLGAPTWNTGADTERSGTSWDEFLYDKLPEV----DMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPVG 122 (173)
T ss_dssp SEEEEEEECCSTTCSSCCSCSTHHHHHHHTGGGC----CCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEEC
T ss_pred CEEEEEEeecCCCCcCccCcHHHHHHHHhhcccc----ccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEe
Confidence 468999999999999 99999999 877632 3889999999999998 84 8999999999999999998876
Q ss_pred cc-------------------cc-ccC---CCCcHhhHHHHHHHHhHHH
Q 008757 74 PV-------------------GL-GDD---DQCIEDDFSAWRELVWPEL 99 (554)
Q Consensus 74 ~~-------------------~~-~d~---~~~~~~~~~~W~~~l~~~l 99 (554)
+. +. .|. +...++.++.|.+.+.+.|
T Consensus 123 ~~~~~g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~i~~w~~~i~~~~ 171 (173)
T 2fcr_A 123 FSNPDDYDYEESKSVRDGKFLGLPLDMVNDQIPMEKRVAGWVEAVVSET 171 (173)
T ss_dssp CBCGGGSCCSCCTTEETTEESSEEEETTTCSSCHHHHHHHHHHHHHHHH
T ss_pred ecccCCcccccchhhhCCeeeeeeecCCCCccccHHHHHHHHHHHHHHh
Confidence 52 11 122 2246778999999988765
No 46
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=99.19 E-value=1.6e-11 Score=114.16 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=79.3
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCC-c-hHHHHHHHHHHHHHHHcCCcccccc---
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQ-Y-EHFNKIAKVVDEILANQGAKRLVPV--- 75 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~-y-~~f~~~~~~~~~~L~~lGa~~~~~~--- 75 (554)
+.|||+++|||.|++|++++.|+++|... .+++++++|||+||+. | ++||.+.+.+++.|.+.||+.+...
T Consensus 47 d~ii~g~pt~~~G~~p~~~~~f~~~l~~~----~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~~~~ 122 (175)
T 1ag9_A 47 DILLLGIPTWYYGEAQCDWDDFFPTLEEI----DFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTA 122 (175)
T ss_dssp SEEEEECCEETTTEECHHHHHHHHHHTTC----CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCEECT
T ss_pred CEEEEEEeecCCCcChHHHHHHHhhhhhc----ccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 46899999999999999999999999732 3889999999999986 8 5899999999999999999887531
Q ss_pred -----------------cc-ccCCC---CcHhhHHHHHHHHhHHHHh
Q 008757 76 -----------------GL-GDDDQ---CIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 76 -----------------~~-~d~~~---~~~~~~~~W~~~l~~~l~~ 101 (554)
+. .|.+. ..++.++.|.+.|++++..
T Consensus 123 g~~~~~s~~~~~~~~~~gl~~~~~~~~~~~~~~i~~w~~~i~~~~~~ 169 (175)
T 1ag9_A 123 GYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHL 169 (175)
T ss_dssp TCCCSCCSCEEETTEESSEEECTTTCHHHHHHHHHHHHHHHHHHHTH
T ss_pred CcccccchheeeCCeEEeeecCCCCcccccHHHHHHHHHHHHHHhhh
Confidence 11 22222 2456799999999998764
No 47
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=99.13 E-value=1.5e-11 Score=112.88 Aligned_cols=93 Identities=22% Similarity=0.325 Sum_probs=74.2
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCC-ch-HHHHHHHHHHHHHHHcCCcccccc---
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV--- 75 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~L~~lGa~~~~~~--- 75 (554)
+.|||++||||.|++|++++.|+++|... .+++++|+|||+||+. |. +||.+++.++++|.+ |+.+.+.
T Consensus 46 d~ii~g~pt~~~g~~p~~~~~f~~~l~~~----~l~~k~~avf~~G~~~~y~~~~~~a~~~l~~~l~~--~~~~~~~~~~ 119 (164)
T 2bmv_A 46 TKVILVAPTAGAGDLQTDWEDFLGTLEAS----DFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKA--GKVVGQTSTD 119 (164)
T ss_dssp SEEEEEEEEETTTEECHHHHHHHTTCCTH----HHHTSEEEEEEECCTTTCTTSTTTHHHHHHHHHTT--SEECCCEEST
T ss_pred CEEEEEECCcCCCcCcHHHHHHHHHHhhh----hcCCCEEEEEEeCCcchhhHHHhHHHHHHHHHHhh--CEEEccccCC
Confidence 46899999999999999999999987632 3789999999999996 97 799999999999998 7666552
Q ss_pred ----------------cc-ccCCC---CcHhhHHHHHHHHhHHH
Q 008757 76 ----------------GL-GDDDQ---CIEDDFSAWRELVWPEL 99 (554)
Q Consensus 76 ----------------~~-~d~~~---~~~~~~~~W~~~l~~~l 99 (554)
+. .|... ..++.+++|.+.+++.|
T Consensus 120 g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~l~~~l 163 (164)
T 2bmv_A 120 GYHFEASKAVEGGKFVGLVIDEDNQDDLTDERISKWVEQVKGSF 163 (164)
T ss_dssp TCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHTTTC
T ss_pred CccccchhhhhcCcccCccCCCCCccccCHHHHHHHHHHHHHhh
Confidence 22 22221 24678999999887654
No 48
>2xod_A NRDI protein, NRDI; flavoprotein, redox protein, ribonucleotide reductase; HET: FMN; 0.96A {Bacillus anthracis} PDB: 2xoe_A* 2x2o_A* 2x2p_A*
Probab=99.11 E-value=4.9e-11 Score=103.54 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=63.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchH-HHHHHHHHHHHHHHcCCcccccccccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEH-FNKIAKVVDEILANQGAKRLVPVGLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~-f~~~~~~~~~~L~~lGa~~~~~~~~~d 79 (554)
+.+||++||||+|++|++++.|++. +++++|+|||+||+.|.. ||.+++.++++|.. ...... .+.
T Consensus 34 ~~ii~g~pt~~~g~~p~~~~~fl~~---------~~~~~~~v~g~G~~~y~~~~~~~~~~l~~~~~~---~~~~~~-~~~ 100 (119)
T 2xod_A 34 EDFILITYTTGFGNVPERVLEFLER---------NNEKLKGVSASGNRNWGDMFGASADKISAKYEV---PIVSKF-ELS 100 (119)
T ss_dssp SCEEEEECCBTTTBCCHHHHHHHHH---------HGGGEEEEEEEECGGGGGGTTHHHHHHHHHHTC---CEEEEE-ETT
T ss_pred CCEEEEEeecCCCcCCHHHHHHHHH---------cCCCEEEEEEeCCChHHHHHHHHHHHHHHHhCC---ccEEEE-ecC
Confidence 4689999999999999999999864 457899999999999975 99999999999743 222221 122
Q ss_pred CCCCcHhhHHHHHHHHhH
Q 008757 80 DDQCIEDDFSAWRELVWP 97 (554)
Q Consensus 80 ~~~~~~~~~~~W~~~l~~ 97 (554)
.+....+.+++|.+.+++
T Consensus 101 ~~~~d~~~~~~~~~~i~~ 118 (119)
T 2xod_A 101 GTNNDVEYFKERVREIAT 118 (119)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhcc
Confidence 222234458899887753
No 49
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=99.08 E-value=1.3e-10 Score=107.10 Aligned_cols=96 Identities=18% Similarity=0.298 Sum_probs=78.3
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCC-Cch-HHHHHHHHHHHHHHHcCCcccccc---
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNR-QYE-HFNKIAKVVDEILANQGAKRLVPV--- 75 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds-~y~-~f~~~~~~~~~~L~~lGa~~~~~~--- 75 (554)
+.|||+++|||.|.+|++++.|+++|... .+++++++|||+|++ .|. +||.+.+.+++.|.++|++.+.+.
T Consensus 48 d~ii~g~p~y~~g~~p~~~~~fl~~l~~~----~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~ 123 (169)
T 1obo_A 48 QYLIIGCPTLNIGELQSDWEGLYSELDDV----DFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGYWSTD 123 (169)
T ss_dssp SEEEEEEEEETTTEECHHHHHHHTTGGGC----CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECT
T ss_pred CEEEEEEeeCCCCcCCHHHHHHHHHhhhc----CcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEeecCC
Confidence 46899999999999999999999988642 388999999999998 497 799999999999999999887541
Q ss_pred ----------------cc-ccC---CCCcHhhHHHHHHHHhHHHH
Q 008757 76 ----------------GL-GDD---DQCIEDDFSAWRELVWPELD 100 (554)
Q Consensus 76 ----------------~~-~d~---~~~~~~~~~~W~~~l~~~l~ 100 (554)
+. .+. +...++.++.|.+.++++|.
T Consensus 124 g~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~~l~ 168 (169)
T 1obo_A 124 GYDFNDSKALRNGKFVGLALDEDNQSDLTDDRIKSWVAQLKSEFG 168 (169)
T ss_dssp TCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHHHHHT
T ss_pred CcccccchhhcCCceeeEEeeCCCccccCHHHHHHHHHHHHHHhc
Confidence 11 122 22356789999999988763
No 50
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=99.07 E-value=1.3e-10 Score=107.10 Aligned_cols=95 Identities=19% Similarity=0.313 Sum_probs=78.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCC-ch-HHHHHHHHHHHHHHHcCCcccccc---
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQ-YE-HFNKIAKVVDEILANQGAKRLVPV--- 75 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~-y~-~f~~~~~~~~~~L~~lGa~~~~~~--- 75 (554)
+.+||+++||+.|++|++++.|+++|... .+++++++|||+|++. |. .||.+.+.+++.|.++||+.+...
T Consensus 48 d~ii~g~pty~~g~~p~~~~~f~~~l~~~----~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~~~~~ 123 (169)
T 1czn_A 48 DYLIIGCPTWNVGELQSDWEGIYDDLDSV----NFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGYWPIE 123 (169)
T ss_dssp SEEEEECCEETTTEECHHHHHHGGGGGGS----CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCCEECT
T ss_pred CEEEEEecccCCCcCCHHHHHHHHHhhhh----ccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 46899999999999999999999988632 3889999999999995 96 799999999999999999887521
Q ss_pred ----------------cc-ccCC---CCcHhhHHHHHHHHhHHH
Q 008757 76 ----------------GL-GDDD---QCIEDDFSAWRELVWPEL 99 (554)
Q Consensus 76 ----------------~~-~d~~---~~~~~~~~~W~~~l~~~l 99 (554)
+. .|.+ ...++.++.|.+.++++|
T Consensus 124 g~~~~~s~~~~~~~~~gl~~~~~~~~~~~~~~~~~w~~~~~~~~ 167 (169)
T 1czn_A 124 GYDFNESKAVRNNQFVGLAIDEDNQPDLTKNRIKTWVSQLKSEF 167 (169)
T ss_dssp TCCCSCCTTEETTEESSEEECTTTCGGGHHHHHHHHHHHHHHHT
T ss_pred CcceecchheeCCeeeeeeecCCCccccCHHHHHHHHHHHHHHh
Confidence 21 2322 245778999999998876
No 51
>1rlj_A NRDI protein; flavoprotein, FMN, thioredoxin, alpha/beta/alpha sandwich, structural genomics, PSI, protein structure initiative; HET: FMN; 2.00A {Bacillus subtilis} SCOP: c.23.5.7
Probab=98.97 E-value=5.1e-10 Score=99.68 Aligned_cols=83 Identities=17% Similarity=0.142 Sum_probs=61.1
Q ss_pred eEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCc-hHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 2 KIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y-~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
.+|+++||||.|++|+++.+|++.. .+..|||+|+||++| +.||.+++.+++++ |...+ ..-+.+.
T Consensus 46 ~~ilv~pTyG~G~~P~~v~~Fl~~~---------~~~~~~V~g~Gd~~yg~~f~~a~~~i~~~~---~~~~~-~~~el~g 112 (139)
T 1rlj_A 46 PFVLVTYTTNFGQVPASTQSFLEKY---------AHLLLGVAASGNKVWGDNFAKSADTISRQY---QVPIL-HKFELSG 112 (139)
T ss_dssp CEEEEECCBGGGBCCHHHHHHHHHH---------GGGEEEEEEEECGGGGGGTTHHHHHHHHHH---TCCEE-EEEETTC
T ss_pred CEEEEEcCcCCCcCcHHHHHHHHhC---------CCCEEEEEecCCCcHHHHHHHHHHHHHHHc---CCCCc-ceEEEcC
Confidence 5789999999999999999888521 246899999999999 68999999988776 43222 2222221
Q ss_pred CCCcHhhHHHHHHHHhH
Q 008757 81 DQCIEDDFSAWRELVWP 97 (554)
Q Consensus 81 ~~~~~~~~~~W~~~l~~ 97 (554)
.....+.+.+|++.+|.
T Consensus 113 ~~~D~~~~~~~~~~~~~ 129 (139)
T 1rlj_A 113 TSKDVELFTQEVERVVT 129 (139)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 22234568899988876
No 52
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=98.73 E-value=2.8e-08 Score=88.02 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=67.9
Q ss_pred CeEEEEeccCCCCCcCc-hHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008757 1 MKIYVIGCRYGDGEPTD-NAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~-n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d 79 (554)
+.+||++||||.|.+|+ +++.|+++|... ++++++++||.|+..| |.+.+.++++|+++|++.+.+...++
T Consensus 47 d~iiig~pty~~g~~p~~~~~~fl~~l~~~-----l~~k~~~~f~t~g~~~---~~a~~~l~~~l~~~G~~~v~~~~~~~ 118 (138)
T 5nul_A 47 DILILGCSAMTDEVLEESEFEPFIEEISTK-----ISGKKVALFGSYGWGD---GKWMRDFEERMNGYGCVVVETPLIVQ 118 (138)
T ss_dssp SEEEEEECCBTTTBCCTTTHHHHHHHHGGG-----CTTCEEEEEEEESSSC---SHHHHHHHHHHHHTTCEECSCCEEEE
T ss_pred CEEEEEcCccCCCCCChHHHHHHHHHHHhh-----cCCCEEEEEEecCCCC---ChHHHHHHHHHHHCCCEEECCceEEe
Confidence 46899999999999997 999999999732 7899999999988764 78899999999999999987655554
Q ss_pred CCC--CcHhhHHHHHHHH
Q 008757 80 DDQ--CIEDDFSAWRELV 95 (554)
Q Consensus 80 ~~~--~~~~~~~~W~~~l 95 (554)
... .. +...+|.+.+
T Consensus 119 ~~p~~~d-~~~~~~~~~l 135 (138)
T 5nul_A 119 NEPDEAE-QDCIEFGKKI 135 (138)
T ss_dssp SSCGGGH-HHHHHHHHHH
T ss_pred cCCCHHH-HHHHHHHHHH
Confidence 422 23 4455555443
No 53
>3n3a_C Protein NRDI; ribonucleotide reductase, four-helix bundle, dimanganese CLU flavoprotein, oxidoreductase; HET: FMN; 1.99A {Escherichia coli} PDB: 3n39_C* 3n3b_C*
Probab=98.49 E-value=7e-08 Score=86.07 Aligned_cols=81 Identities=20% Similarity=0.265 Sum_probs=60.4
Q ss_pred eEEEEeccCC----CCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCc-hHHHHHHHHHHHHHHHcCCcccccc-
Q 008757 2 KIYVIGCRYG----DGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQY-EHFNKIAKVVDEILANQGAKRLVPV- 75 (554)
Q Consensus 2 ~~i~~~sT~g----~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y-~~f~~~~~~~~~~L~~lGa~~~~~~- 75 (554)
-+|++++||| .|+.|+...+|++.+.. .+.-++|+|.||++| +.||.+++.+.+.+.. |.
T Consensus 61 p~vlv~PTYg~g~~~G~vP~~v~dFl~~~~n-------~~~~~gVigsGN~nfg~~Fc~A~d~ia~k~~v-------P~l 126 (153)
T 3n3a_C 61 PYILIVPSYGGGGTAGAVPRQVIRFLNDEHN-------RALLRGVIASGNRNFGEAYGRAGDVIARKCGV-------PWL 126 (153)
T ss_dssp CEEEEEECCTTSSSSSSSCHHHHHHHTSHHH-------HHHEEEEEEEECGGGGGGTTHHHHHHHHHHTC-------CEE
T ss_pred CEEEEEeccCCCCcCCcCcHHHHHHHhhhcc-------cCcEEEEEecCCCchhHHHHHHHHHHHHHhCC-------CeE
Confidence 4799999999 59999999999876642 245699999999998 8999999999998862 22
Q ss_pred ccccCCCCcH---hhHHHHHHHHhH
Q 008757 76 GLGDDDQCIE---DDFSAWRELVWP 97 (554)
Q Consensus 76 ~~~d~~~~~~---~~~~~W~~~l~~ 97 (554)
.+.+- .+.+ +.+.+|++++|+
T Consensus 127 ~kfEL-~Gt~eDv~~v~~~~~~~~~ 150 (153)
T 3n3a_C 127 YRFEL-MGTQSDIENVRKGVTEFWQ 150 (153)
T ss_dssp EEEET-TCCHHHHHHHHHHHHHHHH
T ss_pred EEEeC-CCCHHHHHHHHHHHHHHHh
Confidence 22222 2333 346677777775
No 54
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=98.24 E-value=1.9e-06 Score=75.60 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=66.7
Q ss_pred CeEEEEeccCCCCCcCc-hHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008757 1 MKIYVIGCRYGDGEPTD-NAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~-n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d 79 (554)
+.+||+++||+.|.+|+ +++.|++++.. .++++++++||.+... ||.+.+.+++.|..+|++.+ +...++
T Consensus 48 d~vi~g~p~y~~~~~~~~~~~~fl~~l~~-----~l~~k~~~~~~t~g~~---~~~~~~~l~~~l~~~g~~~~-~~~~~~ 118 (137)
T 2fz5_A 48 DVILLGCPAMGSEELEDSVVEPFFTDLAP-----KLKGKKVGLFGSYGWG---SGEWMDAWKQRTEDTGATVI-GTAIVN 118 (137)
T ss_dssp SEEEEECCCBTTTBCCHHHHHHHHHHHGG-----GCSSCEEEEEEEESSC---CSHHHHHHHHHHHHTTCEEE-EEEEEE
T ss_pred CEEEEEccccCCCCCCHHHHHHHHHHhhh-----hcCCCEEEEEEecCCC---CchHHHHHHHHHHHCCCEEc-CcEEEe
Confidence 46899999999999998 49999999963 3789999999975433 78899999999999999887 433333
Q ss_pred CCCCcHhhHHHHHHHHh
Q 008757 80 DDQCIEDDFSAWRELVW 96 (554)
Q Consensus 80 ~~~~~~~~~~~W~~~l~ 96 (554)
...+..+.+.+|.+++.
T Consensus 119 g~~~~~~~~~~~~~~l~ 135 (137)
T 2fz5_A 119 EMPDNAPECKELGEAAA 135 (137)
T ss_dssp SSSSSCTHHHHHHHHHH
T ss_pred eCCChHHHHHHHHHHHh
Confidence 32211566777776653
No 55
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=98.10 E-value=3.5e-06 Score=76.72 Aligned_cols=90 Identities=12% Similarity=-0.062 Sum_probs=67.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.|||+++||| |.+|. +.|++.|.... ++++++++||.++. +|.+.+.+++.|+++|++.+.+...+..
T Consensus 53 d~ii~Gspty~-g~~p~--~~fl~~l~~~~----l~gk~v~~fgs~g~----~g~a~~~l~~~l~~~G~~~v~~~~~~~~ 121 (161)
T 3hly_A 53 RGIVLGTPPSQ-PSEAV--ATALSTIFAAA----HNKQAIGLFDSYGG----DDEPIDALLAQFRNLGLHTAFPPIRVKD 121 (161)
T ss_dssp SEEEEECCBSS-CCHHH--HHHHHHHHHHC----CTTSEEEEECCCCS----SBCCHHHHHHHHHHTTCEESSSCBCCCS
T ss_pred CEEEEEcCCcC-CchhH--HHHHHHHHhhh----hCCCEEEEEEcCCC----CcHHHHHHHHHHHHCCCEEecCceEEee
Confidence 46899999997 88885 88999887432 78999999997654 3688999999999999998876544433
Q ss_pred CC--CcHhhHHHHHHHHhHHHHh
Q 008757 81 DQ--CIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 81 ~~--~~~~~~~~W~~~l~~~l~~ 101 (554)
.. ...+...+|.+.+...|.+
T Consensus 122 ~P~~~dl~~~~~~g~~la~~l~~ 144 (161)
T 3hly_A 122 QPTEAIYQQCEESGTDLGQWLTR 144 (161)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 22 2334566787777766654
No 56
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=98.07 E-value=2.5e-06 Score=77.55 Aligned_cols=91 Identities=8% Similarity=-0.099 Sum_probs=68.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.|||.++||+ |++| ++.|++.|.... ++++.+++||.++ .+|.+.+.+.++|+++|++.+.+...+..
T Consensus 58 d~ii~Gspty~-g~~p--~~~~l~~l~~~~----~~~k~va~fgs~g----~~~~a~~~l~~~l~~~G~~~v~~~~~~~~ 126 (159)
T 3fni_A 58 TGLVIGMSPAA-SAAS--IQGALSTILGSV----NEKQAVGIFETGG----GDDEPIDPLLSKFRNLGLTTAFPAIRIKQ 126 (159)
T ss_dssp EEEEEECCBTT-SHHH--HHHHHHHHHHHC----CTTSEEEEECCSS----SCBCCHHHHHHHHHHTTCEESSSCBCCSS
T ss_pred CEEEEEcCcCC-CCcc--HHHHHHHHHhhc----ccCCEEEEEEcCC----CCcHHHHHHHHHHHHCCCEEecCceEEEe
Confidence 36899999997 8887 488998887433 6899999999764 34668899999999999998876655544
Q ss_pred CC--CcHhhHHHHHHHHhHHHHhh
Q 008757 81 DQ--CIEDDFSAWRELVWPELDNL 102 (554)
Q Consensus 81 ~~--~~~~~~~~W~~~l~~~l~~~ 102 (554)
.. ...+...+|.+.|...+...
T Consensus 127 ~P~~~dl~~~~~~g~~la~~~~~~ 150 (159)
T 3fni_A 127 TPTENTYKLCEEAGTDLGQWVTRD 150 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 32 23345677888877776654
No 57
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=97.41 E-value=0.00021 Score=74.41 Aligned_cols=93 Identities=14% Similarity=0.012 Sum_probs=69.2
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.+||+++|||.|.+| .++.|+++|... .++++.+++||.+ ..||.+.+.+.+.|..+|++.+.+...++.
T Consensus 305 d~ii~gsp~~~~~~~~-~~~~~l~~l~~~----~l~~k~~~~f~t~----g~~~~a~~~l~~~l~~~G~~~~~~~~~~~~ 375 (402)
T 1e5d_A 305 GAVIVGSPTHNNGILP-YVAGTLQYIKGL----RPQNKIGGAFGSF----GWSGESTKVLAEWLTGMGFDMPATPVKVKN 375 (402)
T ss_dssp SEEEEECCCBTTBCCH-HHHHHHHHHHHT----CCCSCEEEEEEEE----SSSCHHHHHHHHHHHHTTCBCCSCCEEEES
T ss_pred CEEEEECCccCCCchH-HHHHHHHHhhhc----ccCCCEEEEEEcC----CCccHHHHHHHHHHHHCCCEEecCceEEee
Confidence 4689999999877766 699999998743 2789999999974 346889999999999999998864433333
Q ss_pred CC--CcHhhHHHHHHHHhHHHHhh
Q 008757 81 DQ--CIEDDFSAWRELVWPELDNL 102 (554)
Q Consensus 81 ~~--~~~~~~~~W~~~l~~~l~~~ 102 (554)
.. ...+.+..|.+++...+.+.
T Consensus 376 ~p~~~~~~~~~~~~~~l~~~l~~~ 399 (402)
T 1e5d_A 376 VPTHADYEQLKTMAQTIARALKAK 399 (402)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 22 23345778888777766543
No 58
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=97.41 E-value=0.00013 Score=75.82 Aligned_cols=89 Identities=7% Similarity=-0.145 Sum_probs=64.3
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccccc-cccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPV-GLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~-~~~d 79 (554)
+.+||+++||+.|.+|. ++.|+++|.... ++++.+++||.+ ..||.+.+.+++.|..+|++.+.+. ...+
T Consensus 304 d~ii~g~p~y~~~~~~~-~~~~l~~l~~~~----~~~k~~~~~~s~----g~~~~a~~~l~~~l~~~g~~~~~~~~~~~~ 374 (398)
T 1ycg_A 304 RAVLVGSPTINNDILPV-VSPLLDDLVGLR----PKNKVGLAFGAY----GWGGGAQKILEERLKAAKIELIAEPGPTVQ 374 (398)
T ss_dssp SEEEEECCCBTTBCCGG-GHHHHHHHHHHC----CSSCEEEEEEEE----SSSCCHHHHHHHHHHHTTCEESCSSCCEEE
T ss_pred CEEEEECCccCccchHH-HHHHHHHHhccc----cCCCEEEEEEeC----CCchHHHHHHHHHHHHCCeEEecCceEEEe
Confidence 46899999998777774 999999987432 789999999974 3478899999999999999888654 3333
Q ss_pred CCC--CcHhhHHHHHHHHhHH
Q 008757 80 DDQ--CIEDDFSAWRELVWPE 98 (554)
Q Consensus 80 ~~~--~~~~~~~~W~~~l~~~ 98 (554)
... ...+.+++|.+++...
T Consensus 375 ~~p~~~~~~~~~~~~~~l~~~ 395 (398)
T 1ycg_A 375 WVPRGEDLQRCYELGRKIAAR 395 (398)
T ss_dssp SSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHH
Confidence 222 2233455666555443
No 59
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=96.90 E-value=0.0017 Score=60.40 Aligned_cols=72 Identities=11% Similarity=-0.151 Sum_probs=57.9
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||+++|| .|.+|..++.|++++........++++++++|+.+...+..++.+.+.+.+.|..+|++.+-
T Consensus 73 D~ii~gsP~y-~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~ 144 (200)
T 2a5l_A 73 AGLALGSPTR-FGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLG 144 (200)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEEcChh-ccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEEC
Confidence 4689999999 58899999999998863211123789999999999887655677889999999999987654
No 60
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=96.83 E-value=0.00081 Score=69.91 Aligned_cols=92 Identities=14% Similarity=-0.023 Sum_probs=65.3
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.+||+++||+ |..|..++.|++++....... ++++++++||.|+.. +.+.+.+.+.|..+|++.+.+ .....
T Consensus 309 d~iiigsP~y~-~~~~~~~k~~ld~l~~~~~~~-l~~k~~~~~~~~g~~----~~a~~~l~~~l~~~g~~~~~~-~~~~~ 381 (404)
T 2ohh_A 309 GAIALGAPTIY-DEPYPSVGDLLMYLRGLKFNR-TLTRKALVFGSMGGN----GGATGTMKELLAEAGFDVACE-EEVYY 381 (404)
T ss_dssp SEEEEECCEET-TEECTHHHHHHHHHHHHCGGG-TCCEEEEEEEEESSS----CCHHHHHHHHHHHTTEEEEEE-EEEES
T ss_pred CEEEEECcccc-ccchHHHHHHHHHhhhccccc-cCCCEEEEEEecCCC----ChhHHHHHHHHHHCCCEEEeE-EEEee
Confidence 46899999996 566667999999997432122 689999999998865 556789999999999988765 22222
Q ss_pred --CCCcHhhHHHHHHHHhHHH
Q 008757 81 --DQCIEDDFSAWRELVWPEL 99 (554)
Q Consensus 81 --~~~~~~~~~~W~~~l~~~l 99 (554)
+....+.+++|.+++...+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~ 402 (404)
T 2ohh_A 382 VPTGDELDACFEAGRKLAAEI 402 (404)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 1123345667766665443
No 61
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=96.53 E-value=0.0051 Score=64.15 Aligned_cols=92 Identities=8% Similarity=-0.162 Sum_probs=64.7
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCcc-CCceeeEEeecCCCchHHHHHHHHHHHHHHH-cCCcccccc-cc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWL-QKLKYGVFGLGNRQYEHFNKIAKVVDEILAN-QGAKRLVPV-GL 77 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l-~~~~~avfGlGds~y~~f~~~~~~~~~~L~~-lGa~~~~~~-~~ 77 (554)
+.|||+++||+ |..|..++.|++++.... + +++++++||.|+.. +.+.+.+.+.|.. +|++.+.+. ..
T Consensus 309 D~iiigsP~y~-~~~~~~~k~fld~l~~~~----~~~~K~~~~~~t~g~~----~~a~~~l~~~l~~~~g~~~~~~~~~~ 379 (414)
T 2q9u_A 309 GAVAFASPTLN-NTMMPSVAAALNYVRGLT----LIKGKPAFAFGAFGWS----NRAVPDIVAELRDGCKADVYDEKGIT 379 (414)
T ss_dssp SEEEEECCCBT-TBCCHHHHHHHHHHHHHT----TTTTSBEEEEEEESSS----CCHHHHHHHHHHHTSCCBCCCSSCEE
T ss_pred CEEEEEcCccC-cCchHHHHHHHHHHHhhc----ccCCCEEEEEEecCCC----chhHHHHHHHHHhhcCcEEccCccEE
Confidence 46899999996 555556999999987432 5 78999999998764 4467889999999 999887643 22
Q ss_pred ccCCC--CcHhhHHHHHHHHhHHHHh
Q 008757 78 GDDDQ--CIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 78 ~d~~~--~~~~~~~~W~~~l~~~l~~ 101 (554)
+.... ...+.+..|.+++...+.+
T Consensus 380 ~~~~p~~~~~~~~~~~g~~l~~~~~~ 405 (414)
T 2q9u_A 380 FKFNYTEELLEQAYNAGVDLGKRAIA 405 (414)
T ss_dssp EESCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 22221 2234566777776665544
No 62
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=96.39 E-value=0.0067 Score=54.74 Aligned_cols=80 Identities=13% Similarity=0.006 Sum_probs=55.3
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEee-cCCCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGl-Gds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d 79 (554)
+.|||.++|| .|.+|..++.|++.+ .++++++++|+. |++.+. .+.+.+.+.|. ||+- .+-....
T Consensus 80 d~iilG~P~~-~g~~~~~~~~fl~~~-------~l~gk~v~~f~t~g~~~~g---~~~~~l~~~l~--~~~~-~~g~~~~ 145 (162)
T 3klb_A 80 EVLFVGFPVW-WYIAPTIINTFLESY-------DFAGKIVVPFATSGGSGIG---NCEKNLHKAYP--DIVW-KDGKLLN 145 (162)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTS-------CCTTCEEEEEEECSSCCSH---HHHHHHHHHCT--TSEE-CCCEECC
T ss_pred CEEEEEcccc-cCCCCHHHHHHHHhc-------CCCCCEEEEEEEeCCCCcc---HHHHHHHHHcC--CCEe-ecceEEe
Confidence 4689999999 589999888887754 288999999987 556663 34556666665 5553 3322222
Q ss_pred CCCCcHhhHHHHHHHH
Q 008757 80 DDQCIEDDFSAWRELV 95 (554)
Q Consensus 80 ~~~~~~~~~~~W~~~l 95 (554)
. ...+++++.|++++
T Consensus 146 g-~~~~~~v~~W~~~~ 160 (162)
T 3klb_A 146 G-QITRDLVTEWFEKI 160 (162)
T ss_dssp S-CCCHHHHHHHHHHT
T ss_pred C-CCCHHHHHHHHHHh
Confidence 2 34578899999865
No 63
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=96.31 E-value=0.0051 Score=57.19 Aligned_cols=71 Identities=13% Similarity=0.001 Sum_probs=57.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+.|||.++|| .|.+|..++.|++++...-....++++.+++|+.+.+.+..+..+...+...|..+|...+
T Consensus 56 D~ii~gsP~y-~g~~~~~~k~fld~~~~~~~~~~l~gK~~~~f~s~g~~~g~~~~~l~~l~~~l~~~G~~~v 126 (193)
T 3d7n_A 56 DAIIFGTPTY-MGGPSWQFKKFADASSKPWFSAKWQDKVFGGFTNSASLNGDKLNTLQYLVLLAGQHGGLWV 126 (193)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHHHTHHHHHTTTTTTCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeCcc-CCCccHHHHHHHHHhhhhccccccCCCEEEEEEECCCCCCChHHHHHHHHHHHHHCCCEEe
Confidence 4689999999 5999999999999886211122488999999999988876677888999999999998654
No 64
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=96.06 E-value=0.021 Score=52.55 Aligned_cols=100 Identities=11% Similarity=-0.045 Sum_probs=66.4
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEee-cCCCchHHHHHHHHHHHHHHHcCCccccc-----
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRLVP----- 74 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGl-Gds~y~~f~~~~~~~~~~L~~lGa~~~~~----- 74 (554)
+.|||.++|| .|.+|..++.|++++.... ...++++++++||. |+.. ..+..+.+.+.+.|..+|...+-.
T Consensus 54 D~ii~gsP~y-~g~~~~~lk~fld~~~~~~-~~~l~gk~~~~~~t~g~~~-g~~~~~l~~l~~~l~~~g~~~~~~~~~~~ 130 (188)
T 2ark_A 54 DGLAVGSPTN-MGLVSWKMKRFFDDVLGDL-WGEIDGKIACAFSSSGGWG-GGNEVACMSILTMLMNFGFLVFGVTDYVG 130 (188)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHTGGGT-TTSCTTCEEEEEEEESSBT-SSHHHHHHHHHHHHHHTTCEECCEEEEEE
T ss_pred CEEEEEeCcc-CCcCCHHHHHHHHHHhhhh-HHHhCCCeEEEEEECCCCC-CCHHHHHHHHHHHHHHCCcEEeCCCcccc
Confidence 4689999999 8999999999999986411 12388999999999 5533 224556677888888889854421
Q ss_pred -c-----c---cccCC-CCcHhhHHHHHHHHhHHHHhhh
Q 008757 75 -V-----G---LGDDD-QCIEDDFSAWRELVWPELDNLL 103 (554)
Q Consensus 75 -~-----~---~~d~~-~~~~~~~~~W~~~l~~~l~~~~ 103 (554)
. + .+.-+ .+..+....|.+.+...+.+..
T Consensus 131 ~~~~~~~g~~~~~~p~~~~~~~~~~~~g~~la~~~~~~~ 169 (188)
T 2ark_A 131 KKFTLHYGAVVAGEPRSEEEKEACRRLGRRLAEWVAIFV 169 (188)
T ss_dssp TTEEESSSEEEESSCCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCcceeecCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 01111 1122346677777777766553
No 65
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=96.00 E-value=0.01 Score=55.14 Aligned_cols=72 Identities=7% Similarity=-0.132 Sum_probs=55.2
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||.+++| .|.+|..++.|++++...-....++++++++|+.+...+.....+.+.+...|..+|+..+-
T Consensus 72 D~ii~gsP~y-~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~ 143 (199)
T 2zki_A 72 DGFAIGSPTR-YGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVP 143 (199)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECC
T ss_pred CEEEEECCcc-ccCccHHHHHHHHHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeC
Confidence 4689999999 59999999999998752211224889999999987766543456778889999999987653
No 66
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=96.00 E-value=0.0087 Score=55.42 Aligned_cols=71 Identities=13% Similarity=-0.075 Sum_probs=54.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||.++|| .|.+|..++.|++++........++++++++|+.+... .....+.+.+...|..+|+..+-
T Consensus 70 D~ii~gsP~y-~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~-g~~~~~l~~l~~~l~~~g~~~v~ 140 (198)
T 3b6i_A 70 DAIIFGTPTR-FGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTG-GGQEQTITSTWTTLAHHGMVIVP 140 (198)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEESSS-TTHHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEEeChh-cCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCCCC-ccHHHHHHHHHHHHHHCCcEEEC
Confidence 4689999999 89999999999998863211123889999999998765 34456778888889999986653
No 67
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=95.95 E-value=0.018 Score=52.48 Aligned_cols=79 Identities=11% Similarity=0.059 Sum_probs=55.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecC-CCchHHHHHHHHHHHHHHHcCCcccccccccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGN-RQYEHFNKIAKVVDEILANQGAKRLVPVGLGD 79 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGd-s~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d 79 (554)
+.|||+++||+ |.+|..++.|++.+ .++++++++|+.+. +.+ ..+.+.+.+.|. ||+ +.+-...+
T Consensus 89 D~iilg~Pvy~-g~~~~~~~~fl~~~-------~l~gk~v~~f~t~g~~~~---g~a~~~l~~~l~--~~~-~~~g~~~~ 154 (171)
T 4ici_A 89 DVVFIGYPIWW-DLAPRIINTFIEGH-------SLKGKTVVPFATSGGSSI---GNSATVLKKTYP--DLN-WKEGRLLN 154 (171)
T ss_dssp SEEEEEEECBT-TBCCHHHHHHHHHS-------CCTTSEEEEEEECSSCCS---HHHHHHHHHHST--TSE-ECCCEECS
T ss_pred CEEEEeccccc-CCchHHHHHHHHHc-------CCCcCEEEEEEecCCCCc---chHHHHHHHHcC--CCe-eccCeEec
Confidence 46899999995 88888888888765 27899999999965 443 345566677765 554 33433332
Q ss_pred CCCCcHhhHHHHHHHH
Q 008757 80 DDQCIEDDFSAWRELV 95 (554)
Q Consensus 80 ~~~~~~~~~~~W~~~l 95 (554)
. ..++++..|++.+
T Consensus 155 ~--~~~~~i~~Wl~~~ 168 (171)
T 4ici_A 155 R--TDEKAIRAWLDVI 168 (171)
T ss_dssp S--CCHHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHh
Confidence 2 3577899999875
No 68
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=95.88 E-value=0.0083 Score=55.87 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=52.2
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.+||++++| .|..|..++.|.+++.. ..++++.+++|+.|.... .++.....+...|..+|++.+-
T Consensus 71 D~ii~~sP~y-~~~~p~~lK~~ld~l~~----~~~~gK~~~~~~tgg~~~-~~~a~~~~l~~~l~~~g~~~v~ 137 (197)
T 2vzf_A 71 DGLIVATPIY-KASYTGLLKAFLDILPQ----FALAGKAALPLATGGSPA-HVLALDYGLRPVLHSMGVRHVV 137 (197)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHTTSCT----TTTTTCEEEEEEEESSGG-GGGHHHHTHHHHHHTTTCSEEC
T ss_pred CEEEEEeCcc-CCCCCHHHHHHHHhccc----cccCCCEEEEEEECCCcc-hhhHHHHHHHHHHHHcCCEecc
Confidence 4689999999 58899999999998852 348899999999987642 3333324688999999998764
No 69
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=95.62 E-value=0.016 Score=54.31 Aligned_cols=72 Identities=10% Similarity=-0.057 Sum_probs=56.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||.+++| .|.+|..++.|++++...-....++++++++|+.+...+..+..+...+...|..+|+..+-
T Consensus 80 D~ii~gsP~y-~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~ 151 (211)
T 1ydg_A 80 EAIVFSSPTR-FGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTP 151 (211)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECC
T ss_pred CEEEEEcCcc-ccCccHHHHHHHHHhccccccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeC
Confidence 4689999999 59999999999998752111224889999999998876644466778889999999987653
No 70
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=95.23 E-value=0.051 Score=50.16 Aligned_cols=99 Identities=9% Similarity=-0.040 Sum_probs=68.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc---------CCCccCCceeeEEeecCCCch--HHHHHHHHHHHHHHHcCC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE---------GGEWLQKLKYGVFGLGNRQYE--HFNKIAKVVDEILANQGA 69 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~---------~~~~l~~~~~avfGlGds~y~--~f~~~~~~~~~~L~~lGa 69 (554)
+.|||++++| .|.+|.-.+.|.+++.... +...++++++++|+.+...|. .|+.+...+...|..+|+
T Consensus 88 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~~l~~~G~ 166 (201)
T 1t5b_A 88 DVIVIAAPMY-NFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLGFIGI 166 (201)
T ss_dssp SEEEEECCCB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHHHHHHTTC
T ss_pred CEEEEEeCcc-cCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHHHHhhcCc
Confidence 4689999999 6889999999999986210 012488999999998776664 366677778999999999
Q ss_pred ccccccccccCCCCcHhhHHHHHHHHhHHHHh
Q 008757 70 KRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 70 ~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~ 101 (554)
+.+-.......+. .++..++|+++....+.+
T Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~ 197 (201)
T 1t5b_A 167 TDVNFVFAEGIAY-GPEVAAKAQADAKAAIDS 197 (201)
T ss_dssp CCEEEEEECCGGG-CHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEecccC-ChHHHHHHHHHHHHHHHH
Confidence 8763322211122 334457887766555543
No 71
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=94.75 E-value=0.053 Score=49.11 Aligned_cols=65 Identities=6% Similarity=0.083 Sum_probs=51.7
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEee-cCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGL-GNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGl-Gds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+.+||++++| +|..|.-.+.|++|+... .+.++.+++||. |... .+..+...+...|..+|+..+
T Consensus 65 D~ii~~tP~y-~~~~p~~lk~~lD~l~~~----~~~gK~~~~~~~sgg~~--g~~~a~~~l~~~l~~~g~~~v 130 (174)
T 3gfs_A 65 DAIVLLSPEY-HSGMSGALKNALDFLSSE----QFKYKPVALLAVAGGGD--GGINALNNMRTVMRGVYANVI 130 (174)
T ss_dssp SSEEEEEECS-SSSCCHHHHHHHHTCCHH----HHTTCEEEEEEECCSTT--CSHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEcCCc-CCCCCHHHHHHHHHhCHh----hhCCCcEEEEEECCCCh--hHHHHHHHHHHHHHHcCCEEe
Confidence 4589999999 899999999999988632 388999999984 4332 234567789999999999765
No 72
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=94.27 E-value=0.049 Score=56.79 Aligned_cols=83 Identities=13% Similarity=0.011 Sum_probs=58.0
Q ss_pred eEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCC
Q 008757 2 KIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDD 81 (554)
Q Consensus 2 ~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~ 81 (554)
-+||.++||+ |++++.++.|+..|.... ++++..|+||.+. |. +.+.+.+.++|+++|.+.+-+ ......
T Consensus 322 ~ivlGspT~~-~~~~p~~~~~l~~l~~~~----~~~K~~~~FGSyG--Ws--g~a~~~~~~~l~~~~~~~v~~-~~~~~~ 391 (410)
T 4dik_A 322 ALIFGVSTYE-AEIHPLMRFTLLEIIDKA----NYEKPVLVFGVHG--WA--PSAERTAGELLKETKFRILSF-TEIKGS 391 (410)
T ss_dssp EEEEEECCTT-SSSCHHHHHHHHHHHHHC----CCCCEEEEEEECC--CC--CTTSCCHHHHHTTSSCEEEEE-EEECST
T ss_pred eEEEEeCCcC-CcCCHHHHHHHHHHHhcc----cCCCEEEEEECCC--CC--cHHHHHHHHHHHHCCCEEECc-EEEECC
Confidence 5899999996 667778999998887443 6789999999643 32 467899999999999876544 332222
Q ss_pred CCcHhhHHHHHHH
Q 008757 82 QCIEDDFSAWREL 94 (554)
Q Consensus 82 ~~~~~~~~~W~~~ 94 (554)
...++.+++-.+.
T Consensus 392 ~~de~~lee~~~~ 404 (410)
T 4dik_A 392 NMDERKIEEAISL 404 (410)
T ss_dssp TCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 2335555554433
No 73
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=93.60 E-value=0.22 Score=45.61 Aligned_cols=64 Identities=11% Similarity=-0.014 Sum_probs=51.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||++++| .|.+|...+.|.+++.. .++++++++|+.|...- ..+...+...|..+|++.+-
T Consensus 86 D~iI~~sP~y-~~~~p~~lK~~iD~~~~-----~l~gK~~~~~~~G~~~~---~~~~~~l~~~l~~~G~~~~~ 149 (191)
T 1t0i_A 86 DIIVFVTPQY-NWGYPAALKNAIDRLYH-----EWHGKPALVVSYGGHGG---SKCNDQLQEVLHGLKMNVIG 149 (191)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTCST-----TTTTCEEEEEEEETTTT---HHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeceE-CCCCCHHHHHHHHHHHh-----hcCCCEEEEEEeCCcch---hhHHHHHHHHHHHCCCEEcc
Confidence 4689999999 68899999999998752 37899999999988542 34567889999999997653
No 74
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=93.48 E-value=0.14 Score=48.96 Aligned_cols=98 Identities=10% Similarity=0.042 Sum_probs=66.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.|||.+++| .|..|...+.|.+++........+.+++.++|+.+...- ...+...+...|..+|++.+-+....+.
T Consensus 81 D~iI~~sP~y-~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~g--~~~~~~~l~~~l~~~G~~~v~~~~~~~~ 157 (242)
T 1sqs_A 81 DIIIISSPVY-LQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNG--SDNVSEYLRDIFSYMGGQILHQVSITNS 157 (242)
T ss_dssp SEEEEEEEEC-SSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSCC--SCCHHHHHHHHHHHTTCEEEEEEEEEGG
T ss_pred CEEEEEcccc-ccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCCc--hhhHHHHHHHHHHHCCCeeeeEEEEecc
Confidence 4689999999 788999999999998532122358899999997654321 1245567888999999987654433222
Q ss_pred -CCCcHhhHHHHHHHHhHHHHh
Q 008757 81 -DQCIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 81 -~~~~~~~~~~W~~~l~~~l~~ 101 (554)
.....+.++.+.+.+...+..
T Consensus 158 ~~~~~~~~~~~~~~~la~~i~~ 179 (242)
T 1sqs_A 158 LKDIAEAQLMEATYKIEDVLEG 179 (242)
T ss_dssp GGGGHHHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHHHHHHhc
Confidence 223445677777777666654
No 75
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=93.47 E-value=0.27 Score=45.06 Aligned_cols=70 Identities=7% Similarity=0.064 Sum_probs=54.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.|||++++| .|..|...+.|.+++..... ..++++++++|+.+...+. ...+...+...|..+|++.+-
T Consensus 74 D~ii~~sP~y-~~~~p~~lK~~iD~~~~~~~-~~l~gK~~~~~~t~gg~~g-~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 74 DALLFATPEY-NYSMAGVLKNAIDWASRPPE-QPFSGKPAAILGASAGRFG-TARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp SEEEEECCEE-TTEECHHHHHHHHHHTCSSS-CTTTTCEEEEEEECSSTTT-THHHHHHHHHHHHHHTCEECC
T ss_pred CEEEEEcccc-ccCcCHHHHHHHHHhccccC-cccCCCeEEEEEeCCCCCc-cHHHHHHHHHHHHHcCCEEcC
Confidence 4689999999 67799999999999973211 3488999999999754442 234667889999999997664
No 76
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=92.08 E-value=0.31 Score=44.98 Aligned_cols=66 Identities=11% Similarity=0.047 Sum_probs=50.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+-+||++++| +|.+|.-++.|.+|+.. ..+.++..++++.|... ......-..+...|..+|+..+
T Consensus 87 D~ivi~sP~Y-~~~~~~~lK~~iD~~~~----~~l~gK~~~~v~t~G~~-~~~~~~~~~L~~il~~lg~~vv 152 (191)
T 3k1y_A 87 DGLVVATPVF-KASYTGLFKMFFDILDT----DALTGMPTIIAATAGSA-RHSLVLDYALRPLLSYMRAVVV 152 (191)
T ss_dssp SEEEEEEECB-TTBSCHHHHHHHHHSCT----TTTTTCEEEEEEEESSS-TTTTHHHHTHHHHHHHTTCEEC
T ss_pred CEEEEEcCcc-CCcCcHHHHHHHHHhhh----hhcCCCEEEEEEeCCCc-chhhHHHHHHHHHHHHCCCEEc
Confidence 4689999999 89999999999999963 34899999999988543 2222222337888999999765
No 77
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=91.12 E-value=0.32 Score=42.89 Aligned_cols=73 Identities=12% Similarity=0.169 Sum_probs=50.4
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccC
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDD 80 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~ 80 (554)
+.|||.++|| .|.+|..++.|++.+. .+.+..+++|+.|.+.+. .+.+.+.+.|. ||+ +.+-...+
T Consensus 78 d~iilG~P~~-~g~~~~~~~~fl~~~~------~~~~k~~~~~t~gg~~~g---~~~~~l~~~~~--~~~-~~~g~~~~- 143 (151)
T 3edo_A 78 DLILIGSPVW-SGYPATPIKTLLDQMK------NYRGEVASFFTSAGTNHK---AYVSHFNEWAD--GLN-VIGVARDD- 143 (151)
T ss_dssp SEEEEEEEEE-TTEECTHHHHHHHHTT------TCCSEEEEEEECSSCCHH---HHHHHHHHHTT--TSE-EEEEEETT-
T ss_pred CEEEEEccee-cccccHHHHHHHHhch------hcCCEEEEEEEeCCCCCC---cHHHHHHHHcC--CCe-eecccccH-
Confidence 4689999999 5999999999999764 267789999999998763 23455555554 333 32322221
Q ss_pred CCCcHhhHHHHH
Q 008757 81 DQCIEDDFSAWR 92 (554)
Q Consensus 81 ~~~~~~~~~~W~ 92 (554)
.++..|+
T Consensus 144 -----~~~~~w~ 150 (151)
T 3edo_A 144 -----SEVDKWS 150 (151)
T ss_dssp -----TTHHHHH
T ss_pred -----HHHHHHh
Confidence 3588886
No 78
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=90.64 E-value=0.72 Score=42.75 Aligned_cols=69 Identities=9% Similarity=0.034 Sum_probs=54.0
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+-+||++++| +|..|.-.+.|.+|+... ....+.++.+++++.+-..+... .+...+...|..+|+..+
T Consensus 75 D~iVi~tP~Y-~~s~p~~LK~~iD~~~~~-~~~~l~gK~v~~v~tsgg~~g~~-~a~~~Lr~il~~lg~~~v 143 (199)
T 4hs4_A 75 DAVVIVTPEY-NYSVPGVLKNAIDWLSRV-SPQPLAGKPVALVTASPGMIGGA-RAQNHLRQSLVFLDAYVL 143 (199)
T ss_dssp SEEEEEECCB-TTBCCHHHHHHHHHHTTS-SSCTTTTCEEEEEEECSSSSCSH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEcCcc-CCCcCHHHHHHHHHhccc-CCcccCCCEEEEEEeCCCCcccH-HHHHHHHHHHHHcCCEEc
Confidence 4689999999 788999999999999752 23458999999999965544322 244678889999999766
No 79
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=90.57 E-value=0.52 Score=43.52 Aligned_cols=102 Identities=12% Similarity=-0.073 Sum_probs=70.6
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc------c---CCCccCCceeeEEeecCCC--chH--HHHHHHHHHHHHHHc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK------E---GGEWLQKLKYGVFGLGNRQ--YEH--FNKIAKVVDEILANQ 67 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~------~---~~~~l~~~~~avfGlGds~--y~~--f~~~~~~~~~~L~~l 67 (554)
+.|||+++.| ++..|.-.+.|++++... . +...|+|+++.|+..+... |.. |.....-+...|.-+
T Consensus 75 D~iV~~~P~y-~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~~~~l~~~l~~~ 153 (196)
T 3lcm_A 75 DHLIFIFPIW-WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGKVLKKQILKPC 153 (196)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSSCGGGTTTSSCTTHHHHHHTTGGG
T ss_pred CEEEEECchh-hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCCchhhHhhhccCHHHHHHHHHHhc
Confidence 5689999999 899999999999999521 1 1135899999999877765 431 111114466677778
Q ss_pred CCccccccccccCCCCcHhhHHHHHHHHhHHHHhhh
Q 008757 68 GAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 103 (554)
Q Consensus 68 Ga~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 103 (554)
|.+.+-.......+...++....|++++.....+.+
T Consensus 154 G~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~ 189 (196)
T 3lcm_A 154 AISPVKLTELTSIEKISDDERQKLLHKVAQITRNIL 189 (196)
T ss_dssp TCCCEEEEEECSTTTSCHHHHHHHHHHHHHHHHTCC
T ss_pred CCceeeEEEEeCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 998765554444444466788999998777666554
No 80
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=89.62 E-value=2.7 Score=38.53 Aligned_cols=70 Identities=13% Similarity=0.073 Sum_probs=53.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+-+||+++.| +|..|.-.+.|.+||........+.++.++++|.+-..+-... +...+...|..+|+..+
T Consensus 69 D~~ii~tPeY-n~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg~~-a~~~Lr~vl~~lg~~v~ 138 (190)
T 3u7r_A 69 DAVLAITPEY-NRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAAL-AQARLKNDLLHVGTVMM 138 (190)
T ss_dssp SEEEEECCCB-TTBCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTTHH-HHHHHHHHHHTTTCEEC
T ss_pred CcEEEechhh-cccCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCchhhHHH-HHHHHHHHHHHcCCEEc
Confidence 4589999999 8999999999999997433345699999999987655443322 23457788899999654
No 81
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=89.07 E-value=1.4 Score=40.35 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=52.4
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc------CCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE------GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~------~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+.+||++++| +|..|.-.+.|.+++.... ....++++++++++.+... .+..+...+...|..+|++.+-
T Consensus 69 D~iV~~sP~y-~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~--g~~~~~~~l~~~l~~~G~~~v~ 144 (192)
T 3fvw_A 69 DAIWIFSPVY-NYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGA--SPEEVFEDYRSLLPFIRMHLVD 144 (192)
T ss_dssp SEEEEECCCB-TTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC-----CCSHHHHHHHHHTTCEECC
T ss_pred CEEEEECccc-ccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCc--chhHHHHHHHHHHHHcCCeeec
Confidence 4689999999 7889999999999997321 1235899999999887663 2233446678889999997653
No 82
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=89.03 E-value=2.1 Score=38.80 Aligned_cols=101 Identities=7% Similarity=-0.071 Sum_probs=69.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc----cCCCccCCceeeEEeecCCC---ch-------HHHHHHHHHHHHHHH
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK----EGGEWLQKLKYGVFGLGNRQ---YE-------HFNKIAKVVDEILAN 66 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~----~~~~~l~~~~~avfGlGds~---y~-------~f~~~~~~~~~~L~~ 66 (554)
+.|||.++.| .+..|.-.+.|.+.+... .....|+|+++.++...... |. .+...-+-+...+.-
T Consensus 53 D~iV~~~P~y-~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~~~y~~~g~~g~~~~~~l~p~~~~~~~ 131 (177)
T 3ha2_A 53 DRIILEFPLY-WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANK 131 (177)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCGGGSSTTSTTCSCHHHHTHHHHHHHHH
T ss_pred CEEEEECChh-hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCChHHhcccCcccCCHHHHHHHHHHHHHh
Confidence 5789999999 788999999999987521 11345899999988665544 32 123344445667888
Q ss_pred cCCccccccccccCCCCcHhhHHHHHHHHhHHHHhh
Q 008757 67 QGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNL 102 (554)
Q Consensus 67 lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~ 102 (554)
+|.+.+-+......+...+++.++|+++....|.+.
T Consensus 132 ~G~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~l~~~ 167 (177)
T 3ha2_A 132 TKMMYLPILAVHQFLYLEPDAQQRLLVAYQQYATNV 167 (177)
T ss_dssp TTCEECCCEEEESGGGSCHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEeCeEEEeCCCCCCHHHHHHHHHHHHHHHccc
Confidence 899877554444334445778899998877766643
No 83
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=88.95 E-value=1.4 Score=40.44 Aligned_cols=69 Identities=9% Similarity=0.012 Sum_probs=52.0
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+-+||++++| +|..|.-.+.|.+|+.... ...+.++..++++..-..+-.. .+...+...|..+|+..+
T Consensus 74 D~iv~~sP~y-~~~~~~~lK~~iD~~~~~~-~~~~~gK~~~~~~~s~g~~gg~-~a~~~Lr~~l~~lg~~v~ 142 (193)
T 3svl_A 74 DGVVIVTPEY-NYSVPGGLKNAIDWLSRLP-DQPLAGKPVLIQTSSMGVIGGA-RCQYHLRQILVFLDAMVM 142 (193)
T ss_dssp SEEEEEECCB-TTBCCHHHHHHHHHHHTST-TCTTTTCEEEEEEECSSTTTTH-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeccc-CCCCCHHHHHHHHHHhhcC-ccccCCCeEEEEEeCCCCcchH-HHHHHHHHHHHHCCCEEc
Confidence 4689999999 8999999999999997522 3458999999999732222221 245678888999999755
No 84
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=88.67 E-value=1.2 Score=41.05 Aligned_cols=98 Identities=9% Similarity=-0.008 Sum_probs=62.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc---------CCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE---------GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKR 71 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~---------~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~ 71 (554)
+.|||++++| .|.+|.-.+.|.+++.... +...+++++.+++......|..=..+...+...|.-+|++.
T Consensus 96 D~iv~~~P~y-~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~l~~~~~~~G~~~ 174 (208)
T 2hpv_A 96 DKVVIANPMW-NLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVDQ 174 (208)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSCCCSCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEEEeccc-cCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCCCCCcchHHHHHHHHHHhCCCCe
Confidence 4689999999 7889999999999986310 11347899999986544445310223456777888999986
Q ss_pred ccccccccCCCCcHhhHHHHHHHHhHHHH
Q 008757 72 LVPVGLGDDDQCIEDDFSAWRELVWPELD 100 (554)
Q Consensus 72 ~~~~~~~d~~~~~~~~~~~W~~~l~~~l~ 100 (554)
+-.......+. .++..++|+++....+.
T Consensus 175 ~~~~~~~~~~~-~~~~~~~~l~~a~~~~~ 202 (208)
T 2hpv_A 175 VDGLFIEGIDH-FPDRAEELLNTAMTKAT 202 (208)
T ss_dssp EEEEEEECTTT-CGGGHHHHHHHHHHHHH
T ss_pred eeEEEEccccC-CHHHHHHHHHHHHHHHH
Confidence 64433222222 23556677766544443
No 85
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=87.25 E-value=1.7 Score=38.90 Aligned_cols=71 Identities=8% Similarity=-0.018 Sum_probs=53.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccC-------CCccCCceeeEEeecCCCch-HHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEG-------GEWLQKLKYGVFGLGNRQYE-HFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~-------~~~l~~~~~avfGlGds~y~-~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+.|||++++| .|.+|.-++.|.+++..... ...+++++.++|+.+..... .+..+.+.+...|..+|++.+
T Consensus 73 D~ii~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~l~~~l~~~G~~~~ 151 (184)
T 1rli_A 73 HILIFATPIY-WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFK 151 (184)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSCHHHHTHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEEeCcc-ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCCCccchHHHHHHHHHHHHHcCCccc
Confidence 4689999999 78899999999998862110 01378999999998765322 244466788889999999765
No 86
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=86.18 E-value=2.8 Score=38.74 Aligned_cols=98 Identities=7% Similarity=-0.039 Sum_probs=64.6
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc--------cC-----CCccCCceeeEEeecC--CCch-----HHHHHHHHH
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK--------EG-----GEWLQKLKYGVFGLGN--RQYE-----HFNKIAKVV 60 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~--------~~-----~~~l~~~~~avfGlGd--s~y~-----~f~~~~~~~ 60 (554)
+.|||+++.| ++..|.-.+.|++++... .. ...|+++++.++.... ..|. .+.....-+
T Consensus 89 D~iV~~~P~y-~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~~~l 167 (212)
T 3r6w_A 89 DLLVISTPMY-NFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWL 167 (212)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEECSSSCCSTTCTTGGGCCSHHHH
T ss_pred CEEEEEcCcc-cccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEecCCCCcCCCCCCCchhhhHHHH
Confidence 4689999999 788999999999999521 11 2258899888886633 3332 233444667
Q ss_pred HHHHHHcCCccccccccccCCCCcHhhHHHHHHHHhHHHH
Q 008757 61 DEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELD 100 (554)
Q Consensus 61 ~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~ 100 (554)
...|.-+|.+.+-. .........++..+.|++.....+.
T Consensus 168 ~~~l~~~G~~~~~~-v~~~g~~~~~~~~~~~l~~a~~~~~ 206 (212)
T 3r6w_A 168 RTALGFIGIDEVTV-VAAEGEESGGRSFEDSCDEAEQRLL 206 (212)
T ss_dssp HHHHHHHTCCEEEE-EEECCTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCceeEE-EEEecccCCHHHHHHHHHHHHHHHH
Confidence 88888899987633 3333322345667777776555444
No 87
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=84.96 E-value=6.6 Score=36.80 Aligned_cols=100 Identities=13% Similarity=-0.053 Sum_probs=67.4
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc--------------------cCCCccCCceeeEEeecCCCchH-------H
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK--------------------EGGEWLQKLKYGVFGLGNRQYEH-------F 53 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~--------------------~~~~~l~~~~~avfGlGds~y~~-------f 53 (554)
+.|||.++.| .+..|.-.+.|++.+... .+...|+|+++.|+-........ |
T Consensus 85 D~iv~~~P~y-~~~~p~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk~~li~T~G~p~~~y~~~g~~~ 163 (218)
T 3rpe_A 85 DTIIYQMPAW-WMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFF 163 (218)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCEEEEEEECSSCTHHHHCTTSTT
T ss_pred CEEEEECChH-hccCCHHHHHHHHHHHhcCcceeeccccccccccccccCCccCCCCCEEEEEEcCCCChHhhccccccc
Confidence 4689999999 899999999999988511 01235789998887665544222 2
Q ss_pred HH-----HHHHHHHHHHHcCCccccccccccCCCCcHhhHHHHHHHHhHHHHhhh
Q 008757 54 NK-----IAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 103 (554)
Q Consensus 54 ~~-----~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 103 (554)
+. .-.-+...|.-+|.+.+-+....+... ++++++|++++-..|.+.+
T Consensus 164 ~g~~~~~~l~p~~~~l~f~G~~~l~~~~~~g~~~--~~~~~~~~~~~~~~L~~~~ 216 (218)
T 3rpe_A 164 HGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIK--QPDIEGDIARYRQHLAENV 216 (218)
T ss_dssp TTCHHHHHTHHHHHHHHHTTCEECCCEEECSTTT--SCCHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEeceEEEeCCCC--hHHHHHHHHHHHHHHHHhc
Confidence 22 112246778888998775555444332 4578888888777777654
No 88
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=84.21 E-value=5.3 Score=36.82 Aligned_cols=75 Identities=12% Similarity=-0.052 Sum_probs=51.7
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc--------------------cCCCccCCceeeEEeecCCCchHH-------
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK--------------------EGGEWLQKLKYGVFGLGNRQYEHF------- 53 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~--------------------~~~~~l~~~~~avfGlGds~y~~f------- 53 (554)
+.|||.++.| .+..|.-.+.|++.+... .+...+.+++++++.........|
T Consensus 72 D~iV~~~P~y-~~s~pa~LK~~iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~~~~i~t~g~~~~~y~~~g~~~ 150 (204)
T 2amj_A 72 DVVIWQMPGW-WMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFF 150 (204)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCEEEEEEECSSCTHHHHCTTSSS
T ss_pred CEEEEECCcc-ccCCCHHHHHHHHHHhhcCcceeeccCcccccccccccCcccccCCCeEEEEEeCCCChHHHccCcccc
Confidence 5789999999 789999999999976410 012358899999988765543222
Q ss_pred -----HHHHHHHHHHHHHcCCccccccc
Q 008757 54 -----NKIAKVVDEILANQGAKRLVPVG 76 (554)
Q Consensus 54 -----~~~~~~~~~~L~~lGa~~~~~~~ 76 (554)
..+..-+...|.-+|++.+-+..
T Consensus 151 ~~~~~~~~l~~l~~~l~~~G~~~~~~~~ 178 (204)
T 2amj_A 151 HGVGVDGVYLPFHKANQFLGMEPLPTFI 178 (204)
T ss_dssp CSCCHHHHTHHHHHHHHHTTCEECCCEE
T ss_pred cCCCHHHHHHHHHHHHHHcCCeecceEE
Confidence 12223367788889998764443
No 89
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=84.52 E-value=0.2 Score=46.55 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=52.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhccCCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCcccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLV 73 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~ 73 (554)
+-+||++++| +|..|.-.+.|.+|+...... .+.++.+++++.+...+. ...+...+...|..+|+..+-
T Consensus 75 D~iIi~tP~Y-~~s~p~~lK~~iD~l~~~~~~-~l~gK~v~~v~tsgg~~g-~~~a~~~Lr~~l~~lg~~~v~ 144 (199)
T 3s2y_A 75 DAVVIVTPEY-NYSVPGVLKNAIDWLSRVSPQ-PLAGKPVALVTASPGMIG-GARAQYHLRQSLVFLDAYVLN 144 (199)
Confidence 4589999999 788999999999999742111 589999999997544332 334567788888889987663
No 90
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=83.71 E-value=3 Score=38.77 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=65.8
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc-------c--CCCccCCceeeEEeecCCCch-----HHHHHHHHHHHHHHH
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK-------E--GGEWLQKLKYGVFGLGNRQYE-----HFNKIAKVVDEILAN 66 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~-------~--~~~~l~~~~~avfGlGds~y~-----~f~~~~~~~~~~L~~ 66 (554)
+.|||+++.| ++..|.-.+.|.+++... . +...|.++++.++..-...|. .|.....-+...|.-
T Consensus 94 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~~~~~~~~~~~~~~~l~~~l~~ 172 (211)
T 3p0r_A 94 DKVVFGFPLW-NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGF 172 (211)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCCSSSTTGGGCBSHHHHHHHHHH
T ss_pred CEEEEEcChh-cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCCCCCCccchhHHHHHHHHHHHh
Confidence 4689999999 889999999999998621 0 123588999988875444442 233344667888999
Q ss_pred cCCccccccccccCCCCcHhhHHHHHHHHhHHHHh
Q 008757 67 QGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 67 lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~ 101 (554)
+|++.+-.......+. ..+.-++|+++....+.+
T Consensus 173 ~G~~~v~~i~~~g~~~-~~~~~~~~l~~a~~~~~~ 206 (211)
T 3p0r_A 173 FGATNMETVVIEGHNQ-FPDKAEEIITAGLEEAAK 206 (211)
T ss_dssp TTCCSCEEEEEECTTT-SGGGHHHHHHHHHHHHHH
T ss_pred CCCCeeeEEEEecccc-CchHHHHHHHHHHHHHHH
Confidence 9998764433222222 244677888766555543
No 91
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=83.38 E-value=4.4 Score=38.75 Aligned_cols=69 Identities=9% Similarity=-0.028 Sum_probs=51.7
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc-CCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE-GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~-~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+-|||++++| +|..|.-.+.|++|+.... ....+.++..++++.+-..- .. .+...+...|..+|+..+
T Consensus 100 D~iI~~sP~Y-n~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~g-g~-~a~~~Lr~~l~~lg~~~v 169 (247)
T 2q62_A 100 EGQVWVSPER-HGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGSQ-SF-NAVNQMRILGRWMRMITI 169 (247)
T ss_dssp SEEEEEEECS-SSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEEC
T ss_pred CEEEEEeCCC-CCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCcc-HH-HHHHHHHHHHHHCCCEEe
Confidence 4689999999 8999999999999996321 11348999999999853322 11 345678889999999755
No 92
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=82.76 E-value=8 Score=35.39 Aligned_cols=101 Identities=11% Similarity=-0.060 Sum_probs=63.0
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc-----cCCCccCCceeeEEeecCCC---ch-------HHHHHHHHHHHHHH
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK-----EGGEWLQKLKYGVFGLGNRQ---YE-------HFNKIAKVVDEILA 65 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~-----~~~~~l~~~~~avfGlGds~---y~-------~f~~~~~~~~~~L~ 65 (554)
+.|||.++.| .+..|.-.+.|++++... ..+..|+|+++.++...... |. .+...-.-+...+.
T Consensus 60 D~iv~~~P~y-~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~~~y~~~g~~~~~~~~~l~pl~~~~~ 138 (192)
T 3f2v_A 60 DSLVWQFPIY-WFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPAADYRADGAVGCSVAEVLRPFELTAK 138 (192)
T ss_dssp SSEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCGGGSSTTSSSCSCHHHHHHHHHHHHH
T ss_pred CEEEEEcChh-hcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCChHhhccCCccccCHHHHHHHHHHHHH
Confidence 4689999999 889999999999988521 11246899999988765544 42 22333344677888
Q ss_pred HcCCccccccccccCCCC------cHhhHHHHHHHHhHHHHhh
Q 008757 66 NQGAKRLVPVGLGDDDQC------IEDDFSAWRELVWPELDNL 102 (554)
Q Consensus 66 ~lGa~~~~~~~~~d~~~~------~~~~~~~W~~~l~~~l~~~ 102 (554)
-+|.+.+-+....+.... .+++++...++....|.+.
T Consensus 139 f~G~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~~~l~~~ 181 (192)
T 3f2v_A 139 YCNADYRPPFTFHTIDSNAGYSEAARQEVERSARDYLAWLDAL 181 (192)
T ss_dssp HTTCEECCCEEEEC-------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCeEeeeEEEeccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 899987655443333221 2344555555444444443
No 93
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=82.04 E-value=3.2 Score=39.20 Aligned_cols=103 Identities=12% Similarity=-0.065 Sum_probs=67.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc------c---CCCccCCceeeEEeecCCC---chH--HHHHHHH----HH-
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK------E---GGEWLQKLKYGVFGLGNRQ---YEH--FNKIAKV----VD- 61 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~------~---~~~~l~~~~~avfGlGds~---y~~--f~~~~~~----~~- 61 (554)
+.|||+++.| .|..|.-.+.|++++... . ....|+|+++.++...... |.. ++...+. +.
T Consensus 94 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~~~~~y~~~g~~~~~~~~l~p~~~ 172 (228)
T 3tem_A 94 DLVIFQFPLY-WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQH 172 (228)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSSCTTTTSTTSTTCCHHHHHHHHHC
T ss_pred CEEEEECChh-hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCCCHHHHhhccccCCHHHHHHHHHH
Confidence 4689999999 899999999999998521 0 1245899999888554332 431 3322222 11
Q ss_pred HHHHHcCCccccccccccCCCCcHhhHHHHHHHHhHHHHhhhC
Q 008757 62 EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLR 104 (554)
Q Consensus 62 ~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~~ 104 (554)
..+.-+|.+.+-+....+.....++..++|+++....|.....
T Consensus 173 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 215 (228)
T 3tem_A 173 GTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWK 215 (228)
T ss_dssp CCCCTTTCEECCCEEECCTTTSCHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHhCCceEcCeEEEcCCCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 1333467776655545555555677888999988888876653
No 94
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=78.70 E-value=2.8 Score=40.92 Aligned_cols=69 Identities=9% Similarity=-0.076 Sum_probs=51.7
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc-CCCccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE-GGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRL 72 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~-~~~~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~ 72 (554)
+-+||++++| +|..|.-.+.|++|+.... ....+.++..++++.+-..- .+ .+...+...|..+|+..+
T Consensus 125 DgiV~aSP~Y-n~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG~~g-g~-~a~~~Lr~~l~~lg~~vv 194 (279)
T 2fzv_A 125 EGQVWCSPER-HGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGGSQ-SF-NAVNTLRLLGRWMRMFTI 194 (279)
T ss_dssp SEEEEEEEEE-TTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSSSC-CC-HHHHHHHHHHHHTTCEEC
T ss_pred CeEEEEcCcc-ccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECCCcc-HH-HHHHHHHHHHHhcCcEEe
Confidence 4689999999 8999999999999996321 12348999999999853322 22 244678888999998755
No 95
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=76.47 E-value=7.9 Score=37.45 Aligned_cols=102 Identities=13% Similarity=-0.122 Sum_probs=62.1
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc---------CCCccCCceeeEEeecCCC---chH--HH----HHHHHHH-
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE---------GGEWLQKLKYGVFGLGNRQ---YEH--FN----KIAKVVD- 61 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~---------~~~~l~~~~~avfGlGds~---y~~--f~----~~~~~~~- 61 (554)
+.|||.++.| .+..|.-.+.|++++.... +...+.++++.++...... |.. ++ .....+.
T Consensus 95 D~IV~~~P~y-~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg~~~~y~~~g~~~~~~~~~~~~~~ 173 (273)
T 1d4a_A 95 DLVIFQFPLQ-WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQS 173 (273)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSSCTGGGSTTBTTCCHHHHHHHHHT
T ss_pred CEEEEECchh-hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCCChHHhcccccCCCHHHHHHHHHH
Confidence 4689999999 7889999999999986210 1235889998888764444 421 11 1222222
Q ss_pred HHHHHcCCccccccccccCCCCcHhhHHHHHHHHhHHHHhhh
Q 008757 62 EILANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLL 103 (554)
Q Consensus 62 ~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~ 103 (554)
..|.-+|++.+-+..........++..+.|++.....+.+..
T Consensus 174 ~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~l~ 215 (273)
T 1d4a_A 174 GILHFCGFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIW 215 (273)
T ss_dssp TTTGGGTCEECCCEEETTGGGSCHHHHHHHHHHHHHHHTTGG
T ss_pred HHHHhCCCeeeeEEEEeccccCCHHHHHHHHHHHHHHHHHHH
Confidence 355677987764433332222234466677776666665554
No 96
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=69.25 E-value=17 Score=34.00 Aligned_cols=100 Identities=7% Similarity=-0.084 Sum_probs=65.5
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhcc---------CCCcc-CCceeeEEeecCCCc------hHHHHHHHHHHHHH
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEKE---------GGEWL-QKLKYGVFGLGNRQY------EHFNKIAKVVDEIL 64 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~~---------~~~~l-~~~~~avfGlGds~y------~~f~~~~~~~~~~L 64 (554)
+.|||.++.| ++..|.-.+.|++++.... +...+ .+++..|+..-...| ..+.....-+...|
T Consensus 96 D~iv~~~P~y-~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~~~~~~~~~~~~~~~~~l~~~l 174 (223)
T 3u7i_A 96 NTYVIVLPLH-NFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMF 174 (223)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSCCSSSSHHHHTCHHHHHHHHHH
T ss_pred CEEEEEcChh-hccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCCCCCCCccchHHHHHHHHHHHH
Confidence 4689999999 8899999999999986311 01235 788888887644444 22444556678889
Q ss_pred HHcCCccccccccccC-CCCcHhhHHHHHHHHhHHHHh
Q 008757 65 ANQGAKRLVPVGLGDD-DQCIEDDFSAWRELVWPELDN 101 (554)
Q Consensus 65 ~~lGa~~~~~~~~~d~-~~~~~~~~~~W~~~l~~~l~~ 101 (554)
.-+|++.+-....... ..+.++.++++.+.+-....+
T Consensus 175 ~~~G~~~~~~i~~~g~~~~~~~~~~~~a~~~~~~~~~~ 212 (223)
T 3u7i_A 175 NFLGIEDYQIVRAQGTAVLDPTEVLQNAYKEVEEAASR 212 (223)
T ss_dssp HHHTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCceeEEEEEcCccCCCHHHHHHHHHHHHHHHHHH
Confidence 8999987643322222 223566677777765554443
No 97
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=68.70 E-value=22 Score=36.63 Aligned_cols=101 Identities=12% Similarity=0.001 Sum_probs=61.9
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc-----cCCCccCCceeeEEee-cCCC--ch-----HHHHHHHHHHHHHHHc
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK-----EGGEWLQKLKYGVFGL-GNRQ--YE-----HFNKIAKVVDEILANQ 67 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~-----~~~~~l~~~~~avfGl-Gds~--y~-----~f~~~~~~~~~~L~~l 67 (554)
+.|||.++.| .+..|.-.+.|++++... .....|+|+++.++.. |... |. .|...-.-+...|.-+
T Consensus 294 D~iv~~~P~y-w~~~Pa~lK~~iDrv~~~g~~y~~~~~~l~gK~~~~~~t~g~~~~~y~~~~~~~~~~~l~~l~~~~~~~ 372 (413)
T 3l9w_A 294 DLIVWQHPMQ-WYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYC 372 (413)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSTTCCTTTTCEEEEEEECSSCGGGGCCSSSCSGGGGGHHHHHHHHHT
T ss_pred CEEEEECchh-hccCCHHHHHHHHHHHhcCceecCCCCccccceEEEEEeCCCChHhhCCCCccCchHHHHHHHHHHHhC
Confidence 5789999999 788999999999988521 1233589999887754 3322 21 1222335566778889
Q ss_pred CCccccccccccCCCCcHhhHHHHHHHHhHHHHhh
Q 008757 68 GAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNL 102 (554)
Q Consensus 68 Ga~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~ 102 (554)
|.+.+-+........-.+++...+.+.....|...
T Consensus 373 G~~~l~~~~~~g~~~~~d~~~~~~~~~~~~~L~~~ 407 (413)
T 3l9w_A 373 GLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEW 407 (413)
T ss_dssp TCEECCCEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeecceEEEcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99876443332222223445555555555555443
No 98
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=60.40 E-value=18 Score=35.36 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=40.3
Q ss_pred CCCCeeEEEEeeeecCCCCCCCcEEEEEEEecCCCccccCCCeEEEeecC
Q 008757 151 AQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCEN 200 (554)
Q Consensus 151 ~~~~~~~~v~~~~~l~~~~~~~~~~~i~~~~~~~~~~y~~GD~l~i~p~N 200 (554)
...+..++|+..+.++.++...++++|.|..+. .+.|+||.++.|..+.
T Consensus 25 ~~~~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~-~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 25 PKEPFTATIVSVESLVGPKAPGETCHIVIDHGG-NVPYWEGQSYGVIPPG 73 (311)
T ss_dssp TTBCEEEEEEEEEECSCTTSSSCEEEEEEECTT-SSCCCTTCEEEEECSS
T ss_pred CCCCeEEEEEeeEeccCCCCCCccEEEEEeCCC-CCcccCCCEEEEeCCC
Confidence 445678899999999866666789999999764 6899999999998764
No 99
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=45.76 E-value=20 Score=31.96 Aligned_cols=59 Identities=14% Similarity=0.195 Sum_probs=42.0
Q ss_pred ccCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHHHH
Q 008757 34 WLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWR 92 (554)
Q Consensus 34 ~l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~ 92 (554)
.....+++|+-.||..-..++.-+..+.++|.++|++...-....|+.....+.+..|.
T Consensus 7 ~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~ 65 (172)
T 1mkz_A 7 EFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWI 65 (172)
T ss_dssp SCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHH
Confidence 36678999999999977778888888999999999865543333444333444555554
No 100
>2xpn_B SPT6, chromatin structure modulator; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.95A {Encephalitozoon cuniculi} PDB: 2xpo_B
Probab=36.52 E-value=14 Score=21.52 Aligned_cols=12 Identities=25% Similarity=0.769 Sum_probs=9.7
Q ss_pred CceeeEEeecCC
Q 008757 37 KLKYGVFGLGNR 48 (554)
Q Consensus 37 ~~~~avfGlGds 48 (554)
.+-|-|||+||-
T Consensus 3 slFyEIFGtG~E 14 (26)
T 2xpn_B 3 HMFFEIFGTGEE 14 (26)
T ss_pred cEEEEEecCCce
Confidence 467889999985
No 101
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=32.63 E-value=1.5e+02 Score=28.55 Aligned_cols=103 Identities=12% Similarity=-0.055 Sum_probs=63.9
Q ss_pred CeEEEEeccCCCCCcCchHHHHHHHHhhc-----------------cCCCccCCceeeEEeecCCC---ch--HHHHHHH
Q 008757 1 MKIYVIGCRYGDGEPTDNAARFYKWFTEK-----------------EGGEWLQKLKYGVFGLGNRQ---YE--HFNKIAK 58 (554)
Q Consensus 1 ~~~i~~~sT~g~G~~p~n~~~f~~~l~~~-----------------~~~~~l~~~~~avfGlGds~---y~--~f~~~~~ 58 (554)
+.|||+.+.| .+..|.-.+.|.+.+... -+...|.|+++.++-.-+.. |. -|+....
T Consensus 114 D~iv~~~P~~-w~~~Pa~lK~~iDrv~~~g~ay~~~~~~~~~~~~~~~~g~l~gKk~~l~~T~g~~~~~y~~~g~~~~~~ 192 (280)
T 4gi5_A 114 DTVIFQFPLW-WFSMPAIMKGWIDRVYAWGFAYGVGEHSDRHWGDRYGEGTFVGKRAMLIVTAGGWAEHYSPRGINGPID 192 (280)
T ss_dssp SEEEEEEECB-TTBCCHHHHHHHHHHSCBTTTBSCSCBSSSCBSSCSSCSTTTTCEEEEEEECSSCGGGGSTTBTTCCHH
T ss_pred CEEEEEeccc-cccCcHHHHHHHHHhcccCceeccCCccccccccccCccccCCCEEEEEEecCCChHHccccccCCCHH
Confidence 5799999999 788999999999987510 01235778888765433332 42 2333222
Q ss_pred HHHHH-----HHHcCCccccccccccCCCCcHhhHHHHHHHHhHHHHhhhC
Q 008757 59 VVDEI-----LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLR 104 (554)
Q Consensus 59 ~~~~~-----L~~lGa~~~~~~~~~d~~~~~~~~~~~W~~~l~~~l~~~~~ 104 (554)
.+-.. +.-.|.+.+-|....+.+...++++++|++.+-+.|..+..
T Consensus 193 ~~l~~~~~~~~~~~Gm~~l~~f~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 243 (280)
T 4gi5_A 193 DILFPIQHGMLFYPGFEVLPPLVFYRTDKTDAGQFADQCAALAERLDTLWQ 243 (280)
T ss_dssp HHTHHHHCCCCCTTTCEECCCEEECSGGGCCHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHcCCCeECCcEEEecCCCCCHHHHHHHHHHHHHHHhhhhh
Confidence 22111 11247666655555555555677889999888888876653
No 102
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=32.56 E-value=78 Score=24.28 Aligned_cols=24 Identities=0% Similarity=-0.002 Sum_probs=20.6
Q ss_pred HcCCCCHHHHHHHHHHHHHCCCee
Q 008757 527 EQGSLDSSKAESMVKNLQMTGRYL 550 (554)
Q Consensus 527 ~~~~~~~~~a~~~~~~l~~~~Ry~ 550 (554)
+..|++..+..+.+++|+++|+.+
T Consensus 42 e~~GvdKKeVdKaik~LKkEgkI~ 65 (80)
T 2lnb_A 42 KECQAPKRELNQVLYRMKKELKVS 65 (80)
T ss_dssp HHHTSCHHHHHHHHHHHHHTTSEE
T ss_pred HHHCCCHHHHHHHHHHHHHcCCcc
Confidence 445788899999999999999865
No 103
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.36 E-value=20 Score=31.83 Aligned_cols=57 Identities=18% Similarity=0.160 Sum_probs=38.0
Q ss_pred cCCceeeEEeecCCCc--hHHHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHHHH
Q 008757 35 LQKLKYGVFGLGNRQY--EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAWR 92 (554)
Q Consensus 35 l~~~~~avfGlGds~y--~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W~ 92 (554)
.+..+++|+-.||.-+ .-++..+..+.++|+++|++...-....|+ ....+.+.+|.
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~ 63 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAI 63 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHH
Confidence 4567999999999876 356777788999999999976543333444 44555666654
No 104
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=27.80 E-value=41 Score=33.55 Aligned_cols=25 Identities=24% Similarity=0.293 Sum_probs=20.5
Q ss_pred CCeEEEccCCc--cchhHHHHHHHHHH
Q 008757 404 VPIIMIGPGTG--LAPFRGFLQERFAL 428 (554)
Q Consensus 404 ~piimIa~GtG--IAPf~s~l~~~~~~ 428 (554)
+.|++.||||| |-|.+++.++....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC
Confidence 35889999997 88999999987653
No 105
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=26.09 E-value=16 Score=32.94 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=37.5
Q ss_pred ccCCceeeEEeecCCCc-------hHHHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHHH
Q 008757 34 WLQKLKYGVFGLGNRQY-------EHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 91 (554)
Q Consensus 34 ~l~~~~~avfGlGds~y-------~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W 91 (554)
.....+++|+-.||..+ .-++..+..+.++|+++|++...-....|+.....+.+..|
T Consensus 12 ~~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a 76 (178)
T 2pjk_A 12 APKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDA 76 (178)
T ss_dssp -CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 36779999999999655 23666778889999999997543323333322333344444
No 106
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=23.82 E-value=40 Score=29.77 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=37.6
Q ss_pred cCCceeeEEeecCCCchHHHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHHH
Q 008757 35 LQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 91 (554)
Q Consensus 35 l~~~~~avfGlGds~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W 91 (554)
....+++|+-.||.--..++.-+..+.++|+++|++...-....|+.....+.+..|
T Consensus 11 ~~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~ 67 (169)
T 1y5e_A 11 PKEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAG 67 (169)
T ss_dssp -CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHH
T ss_pred ccCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHH
Confidence 567899999999987444666677789999999986543333334432344444444
No 107
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=22.26 E-value=1.4e+02 Score=28.18 Aligned_cols=41 Identities=10% Similarity=0.195 Sum_probs=32.2
Q ss_pred eeEEEEeeeecCCCCCCCcEEEEEEEecC-CCccccCCCeEEEeecC
Q 008757 155 CRSNVAVRKELHTPSSDRSCTHLEFDIAG-TGLTYETGDHVGVYCEN 200 (554)
Q Consensus 155 ~~~~v~~~~~l~~~~~~~~~~~i~~~~~~-~~~~y~~GD~l~i~p~N 200 (554)
..++|+..+.+++ +++.|+|..++ ..+.|+||.++.|..+.
T Consensus 10 ~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~ 51 (290)
T 2r6h_A 10 WECEVLSNKNVST-----FIKEFVVKLPEGETMNFKSGSYAQIKIPK 51 (290)
T ss_dssp EEEEEEEEEESSS-----SEEEEEEECSTTCCCCCCTTCEEEEEECS
T ss_pred EEEEEEEeeecCC-----CeEEEEEEcCCCCccccCCCceEEEEccc
Confidence 4578888888874 58889998764 36789999999997654
No 108
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=21.52 E-value=91 Score=28.90 Aligned_cols=42 Identities=10% Similarity=0.203 Sum_probs=31.9
Q ss_pred CeeEEEEeeeecCCCCCCCcEEEEEEEe-c-CC---CccccCCCeEEEeecC
Q 008757 154 PCRSNVAVRKELHTPSSDRSCTHLEFDI-A-GT---GLTYETGDHVGVYCEN 200 (554)
Q Consensus 154 ~~~~~v~~~~~l~~~~~~~~~~~i~~~~-~-~~---~~~y~~GD~l~i~p~N 200 (554)
+..++|+..+.++. +++.++|.. + +. ...|+||.++.|..++
T Consensus 10 ~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~ 56 (250)
T 1tvc_A 10 SFEAEVVGLNWVSS-----NTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG 56 (250)
T ss_dssp EEEEEBCCCEEEET-----TEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS
T ss_pred eEEEEEEEEEEcCC-----CeEEEEEEecCCCCcccccCcCCCcEEEEEeCC
Confidence 45677888888863 588898887 5 42 5789999999998654
No 109
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=21.25 E-value=31 Score=30.68 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=37.3
Q ss_pred cCCceeeEEeecCCCchH-------HHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHHH
Q 008757 35 LQKLKYGVFGLGNRQYEH-------FNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSAW 91 (554)
Q Consensus 35 l~~~~~avfGlGds~y~~-------f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~W 91 (554)
-+.+++||+=.||+.|.. ....+..|.++|.++|.+.+.-....|+.......+..|
T Consensus 13 ~~~~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~ 76 (178)
T 3iwt_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDA 76 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHH
Confidence 356899999999987631 356677899999999987654433344432333344443
No 110
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=21.16 E-value=84 Score=25.46 Aligned_cols=70 Identities=13% Similarity=0.016 Sum_probs=46.3
Q ss_pred CcCchHHHHHHHHhhccCCCccCCceeeEEeecCC---CchHHHHHHHHHHHHHHHcCCccccccccccCCCCcHhhHHH
Q 008757 14 EPTDNAARFYKWFTEKEGGEWLQKLKYGVFGLGNR---QYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIEDDFSA 90 (554)
Q Consensus 14 ~~p~n~~~f~~~l~~~~~~~~l~~~~~avfGlGds---~y~~f~~~~~~~~~~L~~lGa~~~~~~~~~d~~~~~~~~~~~ 90 (554)
+..+--....+.|+ -+|++|-+=.+|=. .|+.--.+.+++++.+.+.|+.|++-..+.|...+....++.
T Consensus 21 svs~~Va~~i~~i~-------~sGl~y~~~pm~T~IEGe~devm~vv~~~~e~~~~~G~~RV~~~iKid~R~d~~~~~~~ 93 (104)
T 1lxj_A 21 SISDFVALIEKKIR-------ESPLKSTLHSAGTTIEGPWDDVMGLIGEIHEYGHEKGYVRVHTDIRVGTRTDKHQTAQD 93 (104)
T ss_dssp CCHHHHHHHHHHHH-------TSSSEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECCSSCCCCHHH
T ss_pred CHHHHHHHHHHHHH-------HcCCCeEeCCCccEEEcCHHHHHHHHHHHHHHHHHcCCCeEEEEEEEEecCCCCCCHHH
Confidence 44444445666665 24555544443322 288888889999999999999999888888875443344443
Done!