Query 008758
Match_columns 554
No_of_seqs 192 out of 695
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 11:02:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008758.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008758hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z3ea1 c.47.1.12 (A:1-114) Re 9.6 23 0.0017 27.5 -0.8 31 418-448 2-32 (114)
2 d2axtt1 f.23.34.1 (T:1-30) Pho 9.4 1.7E+02 0.012 16.4 3.6 25 71-95 4-28 (30)
3 d1rw1a_ c.47.1.12 (A:) Hypothe 9.2 31 0.0022 26.6 -0.1 31 419-449 3-33 (114)
4 d1nm3a1 c.47.1.1 (A:166-239) C 9.1 43 0.0031 23.3 0.7 26 419-444 8-33 (74)
5 d1egoa_ c.47.1.1 (A:) Glutared 9.0 59 0.0043 23.3 1.5 23 419-441 4-26 (85)
6 d1r7ha_ c.47.1.1 (A:) Glutared 8.0 68 0.005 22.0 1.5 27 419-445 4-30 (74)
7 d1oedb_ f.36.1.1 (B:) Acetylch 6.8 1.3E+02 0.0098 25.6 3.2 29 65-93 219-248 (250)
8 d1h75a_ c.47.1.1 (A:) Glutared 6.4 92 0.0067 21.5 1.5 27 419-445 4-30 (76)
9 d1j9ba_ c.47.1.12 (A:) Arsenat 6.3 60 0.0044 25.9 0.4 30 419-448 3-32 (138)
10 d1fova_ c.47.1.1 (A:) Glutared 5.0 92 0.0067 21.8 0.7 27 419-445 4-30 (82)
No 1
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=9.57 E-value=23 Score=27.50 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=26.1
Q ss_pred hhccCchhhHHHHHHHHHHHhcchhHHHHHh
Q 008758 418 AAITGEAYCSSARMTYELLKRNLLSAVFVET 448 (554)
Q Consensus 418 iAi~G~~F~~Sak~a~~L~~~n~~~~~~~~~ 448 (554)
+-+||.+=|.++|+|.+.++.|+.+....|-
T Consensus 2 i~ly~~~~C~~~rka~~~L~~~~i~~~~~d~ 32 (114)
T d1z3ea1 2 VTLYTSPSCTSCRKARAWLEEHEIPFVERNI 32 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCEEEEET
T ss_pred EEEEcCCCCHHHHHHHHHHHHCCCCeEEEee
Confidence 4589999999999999999999987765543
No 2
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=9.43 E-value=1.7e+02 Score=16.43 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHhhccCCccC
Q 008758 71 ILFILFVISTFGLGIFSICNKNQNY 95 (554)
Q Consensus 71 ilFll~~~~~i~~~~~~~~~~~~~~ 95 (554)
+.|++.+++.++..++++.-++|.|
T Consensus 4 i~yv~ifac~i~lfffaiffreppr 28 (30)
T d2axtt1 4 ITYVFIFACIIALFFFAIFFREPPR 28 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCC
T ss_pred eehHHHHHHHHHHHHHHHHhcCCCC
Confidence 4455555666666666665555543
No 3
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=9.16 E-value=31 Score=26.62 Aligned_cols=31 Identities=13% Similarity=0.220 Sum_probs=26.4
Q ss_pred hccCchhhHHHHHHHHHHHhcchhHHHHHhH
Q 008758 419 AITGEAYCSSARMTYELLKRNLLSAVFVETV 449 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~~~~~~~~i 449 (554)
-+||.+=|.++|+|.+.++.|+.+.-..|-+
T Consensus 3 ~iY~~p~Cs~srka~~~L~~~~i~~~~idy~ 33 (114)
T d1rw1a_ 3 VLYGIKACDTMKKARTWLDEHKVAYDFHDYK 33 (114)
T ss_dssp EEEECSSCHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred EEEECCCChHHHHHHHHHHHcCCCeEEEEcc
Confidence 4799999999999999999999887665544
No 4
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=9.09 E-value=43 Score=23.32 Aligned_cols=26 Identities=23% Similarity=0.179 Sum_probs=17.9
Q ss_pred hccCchhhHHHHHHHHHHHhcchhHH
Q 008758 419 AITGEAYCSSARMTYELLKRNLLSAV 444 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~~~~ 444 (554)
-||+++.|.=+++|-+|+.+++....
T Consensus 8 ~iYs~~~C~~C~~ak~lL~~~~i~~~ 33 (74)
T d1nm3a1 8 SIFTKPGCPFCAKAKQLLHDKGLSFE 33 (74)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTCCCE
T ss_pred EEEECCCCHHHHHHHHHHHHcCCCeE
Confidence 46666777777777778888776543
No 5
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}
Probab=9.04 E-value=59 Score=23.25 Aligned_cols=23 Identities=17% Similarity=0.184 Sum_probs=16.5
Q ss_pred hccCchhhHHHHHHHHHHHhcch
Q 008758 419 AITGEAYCSSARMTYELLKRNLL 441 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~ 441 (554)
-||+++.|+=+++|-+|+.+++.
T Consensus 4 viysk~~Cp~C~~aK~ll~~~~~ 26 (85)
T d1egoa_ 4 VIFGRSGCPYCVRAKDLAEKLSN 26 (85)
T ss_dssp EEECCTTSTHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHhHHHHHHHHHHcCC
Confidence 46777777777777778877553
No 6
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=8.04 E-value=68 Score=22.04 Aligned_cols=27 Identities=19% Similarity=0.167 Sum_probs=21.1
Q ss_pred hccCchhhHHHHHHHHHHHhcchhHHH
Q 008758 419 AITGEAYCSSARMTYELLKRNLLSAVF 445 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~~~~~ 445 (554)
-+|+++.|.=++++-++++++++....
T Consensus 4 ~iYt~~~C~~C~~ak~~L~~~~i~~~~ 30 (74)
T d1r7ha_ 4 TLYTKPACVQCTATKKALDRAGLAYNT 30 (74)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCCEE
T ss_pred EEEeCCCChhHHHHHHHHHHcCCceEE
Confidence 477888888888888889998876643
No 7
>d1oedb_ f.36.1.1 (B:) Acetylcholine receptor protein, beta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=6.78 E-value=1.3e+02 Score=25.61 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=17.5
Q ss_pred cchhHHHHHHHHHH-HHHHHHHHhhccCCc
Q 008758 65 KDIPFIILFILFVI-STFGLGIFSICNKNQ 93 (554)
Q Consensus 65 ~D~~~~ilFll~~~-~~i~~~~~~~~~~~~ 93 (554)
-|++|+++|++..+ +++++-.-+-.+..|
T Consensus 219 lDRlfl~lF~l~~vi~t~~i~l~ap~~~~~ 248 (250)
T d1oedb_ 219 ADRLFLYVFFVICSIGTFSIFLDASHNVPP 248 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcccCCc
Confidence 47899999987554 455554444443333
No 8
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=6.38 E-value=92 Score=21.52 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=20.6
Q ss_pred hccCchhhHHHHHHHHHHHhcchhHHH
Q 008758 419 AITGEAYCSSARMTYELLKRNLLSAVF 445 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~~~~~ 445 (554)
-+|+++.|.-++++-+++.++++....
T Consensus 4 ~iYs~~~C~~C~~ak~~L~~~~i~y~~ 30 (76)
T d1h75a_ 4 TIYTRNDCVQCHATKRAMENRGFDFEM 30 (76)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCCEE
T ss_pred EEEeCCCCccHHHHHHHHHhcCceeEE
Confidence 467778888888888889988876543
No 9
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=6.35 E-value=60 Score=25.89 Aligned_cols=30 Identities=17% Similarity=0.303 Sum_probs=25.6
Q ss_pred hccCchhhHHHHHHHHHHHhcchhHHHHHh
Q 008758 419 AITGEAYCSSARMTYELLKRNLLSAVFVET 448 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~~~~~~~~ 448 (554)
-+||.+=|..+|+|.++++.++.+.-..|-
T Consensus 3 ~iY~~p~Cs~srkal~~L~~~~i~~~~idy 32 (138)
T d1j9ba_ 3 TIYHNPACGTSRNTLEMIRNSGTEPTIILY 32 (138)
T ss_dssp EEECCTTCHHHHHHHHHHHHTTCCCEEECT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCeEEEee
Confidence 478999999999999999999987765543
No 10
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=5.01 E-value=92 Score=21.82 Aligned_cols=27 Identities=19% Similarity=0.111 Sum_probs=18.1
Q ss_pred hccCchhhHHHHHHHHHHHhcchhHHH
Q 008758 419 AITGEAYCSSARMTYELLKRNLLSAVF 445 (554)
Q Consensus 419 Ai~G~~F~~Sak~a~~L~~~n~~~~~~ 445 (554)
-||+++.|.=++++-++++++++....
T Consensus 4 ~iys~~~Cp~C~~ak~~L~~~~i~y~~ 30 (82)
T d1fova_ 4 EIYTKETCPYCHRAKALLSSKGVSFQE 30 (82)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTCCCEE
T ss_pred EEEeCCCCHhHHHHHHHHHHcCCCeEE
Confidence 466666666666777778887766543
Done!