BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008759
(554 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 136/223 (60%), Gaps = 20/223 (8%)
Query: 330 YWQKGD--LLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
Y + GD +LG+G++G VY G + A+KE+ D S+ Q L +EIAL
Sbjct: 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQP---LHEEIALHKH 75
Query: 387 FEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQ--VSAYTRQILLGL 442
+H+NIVQY G+ + + IF+E V GSL L + L+D++ + YT+QIL GL
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 443 KYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPE 497
KYLHD +VHRDIK N+L++ +G +K++DFG +K +L + C GT +MAPE
Sbjct: 136 KYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPE 193
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECVSAIF 539
+I+ +GYG ADIWSLGCT++EM T + P+ + E +A+F
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF 236
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 136/223 (60%), Gaps = 20/223 (8%)
Query: 330 YWQKGD--LLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
Y + GD +LG+G++G VY G + A+KE+ D S+ Q L +EIAL
Sbjct: 7 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQP---LHEEIALHKH 61
Query: 387 FEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQ--VSAYTRQILLGL 442
+H+NIVQY G+ + + IF+E V GSL L + L+D++ + YT+QIL GL
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 443 KYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPE 497
KYLHD +VHRDIK N+L++ +G +K++DFG +K +L + C GT +MAPE
Sbjct: 122 KYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPE 179
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPM-ECVSAIF 539
+I+ +GYG ADIWSLGCT++EM T + P+ + E +A+F
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF 222
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+GSFG V++GI D V + ++D +A+ I ++QEI +LS+ + + +YY
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDL-EEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK 456
G+ ++KL+I +E + GS L+L + L ++Q++ R+IL GL YLH + +HRDIK
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 457 CANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGYGLPADI 512
AN+L+ +G VKLADFG+ A +L D + R GT FWMAPEVI K Y ADI
Sbjct: 147 AANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVI--KQSAYDSKADI 202
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIFI 540
WSLG T +E+ + P++ + + +F+
Sbjct: 203 WSLGITAIELARGEPPHSELHPMKVLFL 230
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+GSFG V++GI D V + ++D +A+ I ++QEI +LS+ + + +YY
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDL-EEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK 456
G+ ++KL+I +E + GS L+L + L ++Q++ R+IL GL YLH + +HRDIK
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 457 CANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGYGLPADI 512
AN+L+ +G VKLADFG+ A +L D + R GT FWMAPEVI K Y ADI
Sbjct: 132 AANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVI--KQSAYDSKADI 187
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIFI 540
WSLG T +E+ + P++ + + +F+
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFL 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+GSFG V++GI D V + ++D +A+ I ++QEI +LS+ + + +YY
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDL-EEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK 456
G+ ++KL+I +E + GS L+L + L ++Q++ R+IL GL YLH + +HRDIK
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 457 CANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGYGLPADI 512
AN+L+ +G VKLADFG+ A +L D + R GT FWMAPEVI K Y ADI
Sbjct: 132 AANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVI--KQSAYDSKADI 187
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIFI 540
WSLG T +E+ + P++ + + +F+
Sbjct: 188 WSLGITAIELARGEPPHSELHPMKVLFL 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+GSFG V++GI D V + ++D +A+ I ++QEI +LS+ + + +YY
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDL-EEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK 456
G+ ++KL+I +E + GS L+L + L ++Q++ R+IL GL YLH + +HRDIK
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 457 CANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGYGLPADI 512
AN+L+ +G VKLADFG+ A +L D + R GT FWMAPEVI K Y ADI
Sbjct: 152 AANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVI--KQSAYDSKADI 207
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIFI 540
WSLG T +E+ + P++ + + +F+
Sbjct: 208 WSLGITAIELARGEPPHSELHPMKVLFL 235
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 127/214 (59%), Gaps = 11/214 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
+ K D +G+GSFG VY+GI D V + ++D +A+ I ++QEI +LS+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGI--DNHTKEVVAIKIIDL-EEAEDEIEDIQQEITVLSQCDSP 77
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
I +Y+G+ +KL+I +E + GS L+L + L ++ ++ R+IL GL YLH +
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGY 506
+HRDIK AN+L+ G VKLADFG+ A +L D + R GT FWMAPEVI K Y
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVI--KQSAY 193
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
ADIWSLG T +E+ + P + + + +F+
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+GSFG V++GI D V + ++D +A+ I ++QEI +LS+ + + +YY
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDL-EEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK 456
G+ SKL+I +E + GS L+L + + Q++ ++IL GL YLH + +HRDIK
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 457 CANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGYGLPADI 512
AN+L+ G VKLADFG+ A +L D + R GT FWMAPEVI + Y ADI
Sbjct: 148 AANVLLSEQGDVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVI--QQSAYDSKADI 203
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIFI 540
WSLG T +E+ + P + M + +F+
Sbjct: 204 WSLGITAIELAKGEPPNSDMHPMRVLFL 231
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 18/211 (8%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG GS+GSVY+ I + G A+K+V + + + ++ +EI+++ + + ++V+Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPV-------ESDLQEIIKEISIMQQCDSPHVVKY 89
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
YG+ + L+I +E GS+ ++ + + L + +++ + L GL+YLH +HR
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKGYGLP 509
DIK NIL++ G KLADFG+ A +L D + R GT FWMAPEVI + GY
Sbjct: 150 DIKAGNILLNTEGHAKLADFGV--AGQLTDXMAKRNXVIGTPFWMAPEVI--QEIGYNCV 205
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
ADIWSLG T +EM + PYA + + AIF+
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHPMRAIFM 236
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 118/194 (60%), Gaps = 11/194 (5%)
Query: 337 LGRGSFG-SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GSFG ++ ++DG + +KE+++ S+ ++ + +E+A+L+ +H NIVQY
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE---ESRREVAVLANMKHPNIVQY 88
Query: 396 YGTDKDESKLYIFLELVTKGSL---LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ ++ LYI ++ G L +N + ++ Q+ + QI L LK++HD+ ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILH 148
Query: 453 RDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
RDIK NI + +G+V+L DFG+A+ + + ++C GT ++++PE+ +NK Y +
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC--ENKPYNNKS 206
Query: 511 DIWSLGCTVLEMLT 524
DIW+LGC + E+ T
Sbjct: 207 DIWALGCVLYELCT 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+W+ LG G+FG VY+ + + A +V +++++ + EI +L+ +H
Sbjct: 38 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDH 93
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+ L+I +E G++ + L L +SQ+ +Q L L YLHD
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVI---NNK 502
++HRD+K NIL +G +KLADFG+ AK T+ + S GT +WMAPEV+ +K
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ Y AD+WSLG T++EM + P+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+W+ LG G+FG VY+ + + A +V +++++ + EI +L+ +H
Sbjct: 38 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDH 93
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+ L+I +E G++ + L L +SQ+ +Q L L YLHD
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVI---NNK 502
++HRD+K NIL +G +KLADFG+ AK T+ + S GT +WMAPEV+ +K
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ Y AD+WSLG T++EM + P+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+W+ LG G+FG VY+ + + A +V +++++ + EI +L+ +H
Sbjct: 38 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCDH 93
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+ L+I +E G++ + L L +SQ+ +Q L L YLHD
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVI---NNK 502
++HRD+K NIL +G +KLADFG+ AK T+ + GT +WMAPEV+ +K
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ Y AD+WSLG T++EM + P+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPH 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS G V + G AVK++ L Q Q L E+ ++ ++HEN+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 213
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
Y + +L++ +E + G+L ++ + + Q++A +L L LH Q V+HRDI
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 273
Query: 456 KCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
K +IL+ +G VKL+DFG A+ +K + K GT +WMAPE+I+ YG DIW
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIW 331
Query: 514 SLGCTVLEMLTSQIPY 529
SLG V+EM+ + PY
Sbjct: 332 SLGIMVIEMVDGEPPY 347
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 122/222 (54%), Gaps = 13/222 (5%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIA 382
R + + +G LG+G F YE D FA K V S+L + Q ++ + EIA
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 94
Query: 383 LLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLG 441
+ ++ ++V ++G +D+ +Y+ LE+ + SLL L++R + + + + RQ + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVI 499
++YLH+ V+HRD+K N+ ++ + VK+ DFGLA + + K+ GT ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL 214
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
KG+ DIWSLGC + +L + P+ C+ +I+
Sbjct: 215 C--KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIR 253
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 14/202 (6%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLD-QGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+GRG F VY DG A+K+V + D ++A+ + +EI LL + H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKAR---ADCIKEIDLLKQLNHPNVIK 96
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH-----LRDSQVSAYTRQILLGLKYLHDQD 449
YY + ++++L I LEL G L + + + + + V Y Q+ L+++H +
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAK--ATKLNDVKSCRGTAFWMAPEVINNKNKGYG 507
V+HRDIK AN+ + A G VKL D GL + ++K S GT ++M+PE I+ GY
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH--ENGYN 214
Query: 508 LPADIWSLGCTVLEMLTSQIPY 529
+DIWSLGC + EM Q P+
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPF 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 120/224 (53%), Gaps = 26/224 (11%)
Query: 335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENI 392
+L+G G++G VY+G G A+K ++D ++ I +QEI +L ++ H NI
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIK---VMDVTGDEEEEI---KQEINMLKKYSHHRNI 83
Query: 393 VQYYGT--DKD----ESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLK 443
YYG K+ + +L++ +E GS+ +L + L++ ++ R+IL GL
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVI 499
+LH V+HRDIK N+L+ N VKL DFG+ + +L+ R GT +WMAPEVI
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV--SAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 500 ---NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
N + Y +D+WSLG T +EM P M + A+F+
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIA 382
R + + +G LG+G F YE D FA K V S+L + Q ++ + EIA
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 94
Query: 383 LLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLG 441
+ ++ ++V ++G +D+ +Y+ LE+ + SLL L++R + + + + RQ + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVI 499
++YLH+ V+HRD+K N+ ++ + VK+ DFGLA + + K GT ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL 214
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
KG+ DIWSLGC + +L + P+ C+ +I+
Sbjct: 215 C--KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIR 253
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIA 382
R + + +G LG+G F YE D FA K V S+L + Q ++ + EIA
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 94
Query: 383 LLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLG 441
+ ++ ++V ++G +D+ +Y+ LE+ + SLL L++R + + + + RQ + G
Sbjct: 95 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVI 499
++YLH+ V+HRD+K N+ ++ + VK+ DFGLA + + K GT ++APEV+
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 214
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
KG+ DIWSLGC + +L + P+ C+ +I+
Sbjct: 215 C--KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIR 253
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS G V + G AVK++ L Q Q L E+ ++ ++HEN+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 136
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
Y + +L++ +E + G+L ++ + + Q++A +L L LH Q V+HRDI
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 196
Query: 456 KCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
K +IL+ +G VKL+DFG A+ +K + K GT +WMAPE+I+ YG DIW
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIW 254
Query: 514 SLGCTVLEMLTSQIPY 529
SLG V+EM+ + PY
Sbjct: 255 SLGIMVIEMVDGEPPY 270
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS G V + G AVK++ L Q Q L E+ ++ ++HEN+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 91
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
Y + +L++ +E + G+L ++ + + Q++A +L L LH Q V+HRDI
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 151
Query: 456 KCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
K +IL+ +G VKL+DFG A+ +K + K GT +WMAPE+I+ YG DIW
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIW 209
Query: 514 SLGCTVLEMLTSQIPY 529
SLG V+EM+ + PY
Sbjct: 210 SLGIMVIEMVDGEPPY 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS G V + G AVK++ L Q Q L E+ ++ ++HEN+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 93
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
Y + +L++ +E + G+L ++ + + Q++A +L L LH Q V+HRDI
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 153
Query: 456 KCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
K +IL+ +G VKL+DFG A+ +K + K GT +WMAPE+I+ YG DIW
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIW 211
Query: 514 SLGCTVLEMLTSQIPY 529
SLG V+EM+ + PY
Sbjct: 212 SLGIMVIEMVDGEPPY 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GSFG+VY + A+K++S G Q+ + + +E+ L + H N +QY
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSY--SGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 396 YGTDKDESKLYIFLE--LVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
G E ++ +E L + LL ++++ L++ +++A T L GL YLH +++HR
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKG-YGLPADI 512
D+K NIL+ G VKL DFG A+ + GT +WMAPEVI ++G Y D+
Sbjct: 179 DVKAGNILLSEPGLVKLGDFG--SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV 236
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIF 539
WSLG T +E+ + P M +SA++
Sbjct: 237 WSLGITCIELAERKPPLFNMNAMSALY 263
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIA 382
R + + +G LG+G F YE D FA K V S+L + Q ++ + EIA
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK----MSTEIA 78
Query: 383 LLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLG 441
+ ++ ++V ++G +D+ +Y+ LE+ + SLL L++R + + + + RQ + G
Sbjct: 79 IHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 138
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVI 499
++YLH+ V+HRD+K N+ ++ + VK+ DFGLA + + K GT ++APEV+
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL 198
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
KG+ DIWSLGC + +L + P+ C+ +I+
Sbjct: 199 C--KKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIR 237
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS G V + G AVK++ L Q Q L E+ ++ ++HEN+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 86
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
Y + +L++ +E + G+L ++ + + Q++A +L L LH Q V+HRDI
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 146
Query: 456 KCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
K +IL+ +G VKL+DFG A+ +K + K GT +WMAPE+I+ YG DIW
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIW 204
Query: 514 SLGCTVLEMLTSQIPY 529
SLG V+EM+ + PY
Sbjct: 205 SLGIMVIEMVDGEPPY 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS G V + G AVK++ L Q Q L E+ ++ ++HEN+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHENVVEM 82
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
Y + +L++ +E + G+L ++ + + Q++A +L L LH Q V+HRDI
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 142
Query: 456 KCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
K +IL+ +G VKL+DFG A+ +K + K GT +WMAPE+I+ YG DIW
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIW 200
Query: 514 SLGCTVLEMLTSQIPY 529
SLG V+EM+ + PY
Sbjct: 201 SLGIMVIEMVDGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 322 GRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
G K+ T ++K +G+G+ G+VY + +EV++ Q + + EI
Sbjct: 16 GDPKKKYTRFEK---IGQGASGTVYTAMD----VATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLG 441
++ ++ NIV Y + +L++ +E + GSL ++ + + Q++A R+ L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AKATKLNDVKSCR-GTAFWMAPEVI 499
L++LH V+HRDIK NIL+ +GSVKL DFG A+ T +S GT +WMAPEV+
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
K YG DIWSLG +EM+ + PY + A+++
Sbjct: 189 T--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GSFG+VY + A+K++S G Q+ + + +E+ L + H N +QY
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSY--SGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 396 YGTDKDESKLYIFLE--LVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
G E ++ +E L + LL ++++ L++ +++A T L GL YLH +++HR
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKG-YGLPADI 512
D+K NIL+ G VKL DFG A+ + GT +WMAPEVI ++G Y D+
Sbjct: 140 DVKAGNILLSEPGLVKLGDFG--SASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAIF 539
WSLG T +E+ + P M +SA++
Sbjct: 198 WSLGITCIELAERKPPLFNMNAMSALY 224
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 322 GRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
G K+ T ++K +G+G+ G+VY + +EV++ Q + + EI
Sbjct: 16 GDPKKKYTRFEK---IGQGASGTVYTAMD----VATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLG 441
++ ++ NIV Y + +L++ +E + GSL ++ + + Q++A R+ L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AKATKLNDVKSCR-GTAFWMAPEVI 499
L++LH V+HRDIK NIL+ +GSVKL DFG A+ T +S GT +WMAPEV+
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
K YG DIWSLG +EM+ + PY + A+++
Sbjct: 189 T--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 322 GRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
G K+ T ++K +G+G+ G+VY + +EV++ Q + + EI
Sbjct: 16 GDPKKKYTRFEK---IGQGASGTVYTAMD----VATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLG 441
++ ++ NIV Y + +L++ +E + GSL ++ + + Q++A R+ L
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AKATKLNDVKS-CRGTAFWMAPEVI 499
L++LH V+HRDIK NIL+ +GSVKL DFG A+ T +S GT +WMAPEV+
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
K YG DIWSLG +EM+ + PY + A+++
Sbjct: 189 T--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 322 GRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
G K+ T ++K +G+G+ G+VY + +EV++ Q + + EI
Sbjct: 17 GDPKKKYTRFEK---IGQGASGTVYTAMD----VATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLG 441
++ ++ NIV Y + +L++ +E + GSL ++ + + Q++A R+ L
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AKATKLNDVKSCR-GTAFWMAPEVI 499
L++LH V+HRDIK NIL+ +GSVKL DFG A+ T +S GT +WMAPEV+
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
K YG DIWSLG +EM+ + PY + A+++
Sbjct: 190 T--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 110/189 (58%), Gaps = 21/189 (11%)
Query: 357 AVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGS 416
A+K ++L + + S+ +L +EI +S+ H NIV YY + + +L++ ++L++ GS
Sbjct: 39 AIKRINL----EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 94
Query: 417 LLNLYQRY-----H----LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS 467
+L++ + H L +S ++ R++L GL+YLH +HRD+K NIL+ +GS
Sbjct: 95 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 154
Query: 468 VKLADFGLAK-------ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVL 520
V++ADFG++ T+ K+ GT WMAPEV+ + +GY ADIWS G T +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM-EQVRGYDFKADIWSFGITAI 213
Query: 521 EMLTSQIPY 529
E+ T PY
Sbjct: 214 ELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 110/189 (58%), Gaps = 21/189 (11%)
Query: 357 AVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGS 416
A+K ++L + + S+ +L +EI +S+ H NIV YY + + +L++ ++L++ GS
Sbjct: 44 AIKRINL----EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99
Query: 417 LLNLYQRY-----H----LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS 467
+L++ + H L +S ++ R++L GL+YLH +HRD+K NIL+ +GS
Sbjct: 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 159
Query: 468 VKLADFGLA-------KATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVL 520
V++ADFG++ T+ K+ GT WMAPEV+ + +GY ADIWS G T +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM-EQVRGYDFKADIWSFGITAI 218
Query: 521 EMLTSQIPY 529
E+ T PY
Sbjct: 219 ELATGAAPY 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG+G F +E +D FA K V SLL + Q ++ + EI++ H+++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 79
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V ++G +D +++ LEL + SLL L++R L + + Y RQI+LG +YLH V+
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINNKNKGYGLP 509
HRD+K N+ ++ + VK+ DFGLA + + K+ GT ++APEV++ KG+
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS--KKGHSFE 197
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
D+WS+GC + +L + P+ C+ +++
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR 228
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG+G F +E +D FA K V SLL + Q ++ + EI++ H+++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 83
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V ++G +D +++ LEL + SLL L++R L + + Y RQI+LG +YLH V+
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINNKNKGYGLP 509
HRD+K N+ ++ + VK+ DFGLA + + K+ GT ++APEV++ KG+
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS--KKGHSFE 201
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
D+WS+GC + +L + P+ C+ +++
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR 232
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG+G F +E +D FA K V SLL + Q ++ + EI++ H+++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 79
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V ++G +D +++ LEL + SLL L++R L + + Y RQI+LG +YLH V+
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINNKNKGYGLP 509
HRD+K N+ ++ + VK+ DFGLA + + K+ GT ++APEV++ KG+
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS--KKGHSFE 197
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
D+WS+GC + +L + P+ C+ +++
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR 228
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 16/209 (7%)
Query: 330 YWQKGDLLGR-GSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE 388
+W+ ++G G FG VY+ + + A +V +++++ + EI +L+ +
Sbjct: 13 FWE---IIGELGDFGKVYKAQNKETSVLAAAKVI----DTKSEEELEDYMVEIDILASCD 65
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLH 446
H NIV+ E+ L+I +E G++ + L L +SQ+ +Q L L YLH
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKA---TKLNDVKSCRGTAFWMAPEVI---N 500
D ++HRD+K NIL +G +KLADFG++ T + S GT +WMAPEV+
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+K++ Y AD+WSLG T++EM + P+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPH 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 322 GRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
G K+ T ++K +G+G+ G+VY + +EV++ Q + + EI
Sbjct: 17 GDPKKKYTRFEK---IGQGASGTVYTAMD----VATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLG 441
++ ++ NIV Y + +L++ +E + GSL ++ + + Q++A R+ L
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AKATKLNDVKSCR-GTAFWMAPEVI 499
L++LH V+HR+IK NIL+ +GSVKL DFG A+ T +S GT +WMAPEV+
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
K YG DIWSLG +EM+ + PY + A+++
Sbjct: 190 T--RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 4/173 (2%)
Query: 359 KEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL 418
K+V++ + +Q L E+ ++ + H+N+V Y + +L++ +E + G+L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AK 477
++ + + Q++ +L L YLH+Q V+HRDIK +IL+ ++G +KL+DFG A+
Sbjct: 131 DIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 190
Query: 478 ATK-LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+K + K GT +WMAPEVI+ YG DIWSLG V+EM+ + PY
Sbjct: 191 VSKEVPKRKXLVGTPYWMAPEVISRLP--YGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 13/212 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG+G F +E +D FA K V SLL + Q ++ + EI++ H+++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 101
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V ++G +D +++ LEL + SLL L++R L + + Y RQI+LG +YLH V+
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINNKNKGYGLP 509
HRD+K N+ ++ + VK+ DFGLA + + K GT ++APEV++ KG+
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--KKGHSFE 219
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
D+WS+GC + +L + P+ C+ +++
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR 250
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 13/212 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG+G F +E +D FA K V SLL + Q ++ + EI++ H+++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 103
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V ++G +D +++ LEL + SLL L++R L + + Y RQI+LG +YLH V+
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINNKNKGYGLP 509
HRD+K N+ ++ + VK+ DFGLA + + K GT ++APEV++ KG+
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--KKGHSFE 221
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
D+WS+GC + +L + P+ C+ +++
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR 252
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 331 WQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
W+ LG G+FG VY+ + + G A K + +++++ + EI +L+ +H
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEELEDYIVEIEILATCDH 75
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
IV+ G + KL+I +E G++ + L L + Q+ RQ+L L +LH
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVI---NNK 502
+ ++HRD+K N+L+ G ++LADFG+ AK K L S GT +WMAPEV+ K
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ Y ADIWSLG T++EM + P+
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPH 222
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 331 WQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
W+ LG G+FG VY+ + + G A K + +++++ + EI +L+ +H
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-----TKSEEELEDYIVEIEILATCDH 67
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
IV+ G + KL+I +E G++ + L L + Q+ RQ+L L +LH
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGL-AKATK-LNDVKSCRGTAFWMAPEVI---NNK 502
+ ++HRD+K N+L+ G ++LADFG+ AK K L S GT +WMAPEV+ K
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ Y ADIWSLG T++EM + P+
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPH 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 13/212 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEV--SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG+G F +E +D FA K V SLL + Q ++ + EI++ H+++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK----MSMEISIHRSLAHQHV 77
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V ++G +D +++ LEL + SLL L++R L + + Y RQI+LG +YLH V+
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINNKNKGYGLP 509
HRD+K N+ ++ + VK+ DFGLA + + K GT ++APEV++ KG+
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--KKGHSFE 195
Query: 510 ADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
D+WS+GC + +L + P+ C+ +++
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFE-TSCLKETYLR 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 10/173 (5%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNL 420
V ++D Q ++ + L E+ ++ ++H N+V+ Y + +L++ +E + G+L ++
Sbjct: 75 VKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132
Query: 421 YQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL-AKAT 479
+ L + Q++ +L L YLH Q V+HRDIK +IL+ +G VKL+DFG A+ +
Sbjct: 133 VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS 192
Query: 480 KLNDV---KSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K DV K GT +WMAPEVI+ Y DIWSLG V+EM+ + PY
Sbjct: 193 K--DVPKRKXLVGTPYWMAPEVISRSL--YATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 120/222 (54%), Gaps = 27/222 (12%)
Query: 335 DLLGRGSFGSVYEGISD-DGFFFAVKEVS---LLDQGS------------------QAKQ 372
D +G+GS+G V ++ D ++A+K +S L+ Q Q +
Sbjct: 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 373 SISQLEQEIALLSRFEHENIVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ 430
I Q+ QEIA+L + +H N+V+ D +E LY+ ELV +G ++ + L + Q
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCR 488
Y + ++ G++YLH Q ++HRDIK +N+LV +G +K+ADFG++ K +D + +
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 489 GTAFWMAPEVINNKNKGY-GLPADIWSLGCTVLEMLTSQIPY 529
GT +MAPE ++ K + G D+W++G T+ + Q P+
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 118/218 (54%), Gaps = 15/218 (6%)
Query: 320 PNGRFKRIITYWQKGDLLGRGSFGSVYEG-ISDDGFFFAVK----EVSLLDQGSQAKQSI 374
P+ + K I ++ +LG+GSFG V+ FFA+K +V L+D +
Sbjct: 9 PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC---- 64
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD-SQVSA 433
+ +E+ + L+ +EH + + T + + L+ +E + G L+ Q H D S+ +
Sbjct: 65 TMVEKRVLSLA-WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 123
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTA 491
Y +I+LGL++LH + +V+RD+K NIL+D +G +K+ADFG+ K L D K+ GT
Sbjct: 124 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 492 FWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE++ + Y D WS G + EML Q P+
Sbjct: 184 DYIAPEILLGQK--YNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 117/206 (56%), Gaps = 13/206 (6%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQ-LEQEIALLSRFE 388
++ G+LLG+GSF VY S G A+K ++D+ + K + Q ++ E+ + + +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIK---MIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLR---DSQVSAYTRQILLGLKYL 445
H +I++ Y +D + +Y+ LE+ G + N Y + ++ +++ + QI+ G+ YL
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK--SCRGTAFWMAPEVINNKN 503
H ++HRD+ +N+L+ N ++K+ADFGLA K+ K + GT +++PE+
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT--R 186
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
+GL +D+WSLGC +L + P+
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVK----EVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
+LG+GSFG V+ FFA+K +V L+D + + +E+ + L+ +EH
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC----TMVEKRVLSLA-WEHP 78
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD-SQVSAYTRQILLGLKYLHDQD 449
+ + T + + L+ +E + G L+ Q H D S+ + Y +I+LGL++LH +
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPEVINNKNKGYG 507
+V+RD+K NIL+D +G +K+ADFG+ K L D K+ GT ++APE++ + Y
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL--LGQKYN 196
Query: 508 LPADIWSLGCTVLEMLTSQIPY 529
D WS G + EML Q P+
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE 380
N F+ ++ +QK + +G G++G VY+ G A+K + L ++ + S +E
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRL---DAEDEGIPSTAIRE 69
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQIL 439
I+LL H NIV E L + E + K L + + L+DSQ+ Y Q+L
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG---TAFWMAP 496
G+ + H ++HRD+K N+L++++G++KLADFGLA+A + V+S T ++ AP
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAP 188
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+V+ K Y DIWS+GC EM+T + P P
Sbjct: 189 DVLMGSKK-YSTSVDIWSIGCIFAEMITGK-PLFP 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 10/215 (4%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE 380
N F+ ++ +QK + +G G++G VY+ G A+K + L ++ + S +E
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRL---DAEDEGIPSTAIRE 69
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQIL 439
I+LL H NIV E L + E + K L + + L+DSQ+ Y Q+L
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG---TAFWMAP 496
G+ + H ++HRD+K N+L++++G++KLADFGLA+A + V+S T ++ AP
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAP 188
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+V+ K Y DIWS+GC EM+T + P P
Sbjct: 189 DVLMGSKK-YSTSVDIWSIGCIFAEMITGK-PLFP 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 12/201 (5%)
Query: 336 LLGRGSFGSVY--EGIS--DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
+LG+GSFG V+ ++ D G +A+K +L + + + + + E +L+ H
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMK---VLKKATLKVRDRVRTKMERDILADVNHPF 91
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
+V+ + + E KLY+ L+ + G L L + + V Y ++ LGL +LH +
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPEVINNKNKGYGL 508
++RD+K NIL+D G +KL DFGL+K ++ K+ GT +MAPEV+N +G+
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN--RQGHSH 209
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
AD WS G + EMLT +P+
Sbjct: 210 SADWWSYGVLMFEMLTGSLPF 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 17/216 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G GSFG+V+ G AVK L++Q A++ +++ +E+A++ R H NIV +
Sbjct: 45 IGAGSFGTVHRA-EWHGSDVAVK--ILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFM 100
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ----RYHLRDSQVSAYTRQILLGLKYLHDQD--V 450
G L I E +++GSL L R L + + + + G+ YLH+++ +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 451 VHRDIKCANILVDANGSVKLADFGLA--KATKLNDVKSCRGTAFWMAPEVINNKNKGYGL 508
VHR++K N+LVD +VK+ DFGL+ KA+ KS GT WMAPEV+ ++
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK- 219
Query: 509 PADIWSLGCTVLEMLTSQIPYA---PMECVSAIFIK 541
+D++S G + E+ T Q P+ P + V+A+ K
Sbjct: 220 -SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G GSFG+V+ G AVK L++Q A++ +++ +E+A++ R H NIV +
Sbjct: 45 IGAGSFGTVHRA-EWHGSDVAVK--ILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFM 100
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ----RYHLRDSQVSAYTRQILLGLKYLHDQD--V 450
G L I E +++GSL L R L + + + + G+ YLH+++ +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 451 VHRDIKCANILVDANGSVKLADFGLA--KATKLNDVKSCRGTAFWMAPEVINNKNKGYGL 508
VHRD+K N+LVD +VK+ DFGL+ KA+ K GT WMAPEV+ ++
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEK- 219
Query: 509 PADIWSLGCTVLEMLTSQIPYA---PMECVSAIFIK 541
+D++S G + E+ T Q P+ P + V+A+ K
Sbjct: 220 -SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 7/217 (3%)
Query: 337 LGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G+GSFG V +D +A+K ++ Q + + + +E+ ++ EH +V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMN--KQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 396 YGTDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ + +DE +++ ++L+ G L +L Q H ++ V + ++++ L YL +Q ++HRD
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRD 140
Query: 455 IKCANILVDANGSVKLADFGLAKAT-KLNDVKSCRGTAFWMAPEVINN-KNKGYGLPADI 512
+K NIL+D +G V + DF +A + + + GT +MAPE+ ++ K GY D
Sbjct: 141 MKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDW 200
Query: 513 WSLGCTVLEMLTSQIPYAPMECVSAI-FIKTVAVTVI 548
WSLG T E+L + PY S+ + T TV+
Sbjct: 201 WSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALL 384
Y +K LG G FG V Y+ +D G AVK + D G Q + S +QEI +L
Sbjct: 15 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA-DCGPQHR---SGWKQEIDIL 70
Query: 385 SRFEHENIVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGL 442
HE+I++Y G D+ E L + +E V GSL + R+ + +Q+ + +QI G+
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGM 130
Query: 443 KYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-KLNDVKSCR----GTAFWMAPE 497
YLH Q +HR++ N+L+D + VK+ DFGLAKA + ++ R FW APE
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT----SQIPYAPMECVSAIFIKTVAVTVI 548
+ Y +D+WS G T+ E+LT SQ P P + + I I +TV+
Sbjct: 191 CLKEYKFYYA--SDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVL 241
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 24/235 (10%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALL 384
Y +K LG G FG V Y+ +D G AVK + D G Q + S +QEI +L
Sbjct: 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA-DAGPQHR---SGWKQEIDIL 87
Query: 385 SRFEHENIVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGL 442
HE+I++Y G D + L + +E V GSL + R+ + +Q+ + +QI G+
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGM 147
Query: 443 KYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-KLNDVKSCR----GTAFWMAPE 497
YLH Q +HRD+ N+L+D + VK+ DFGLAKA + ++ R FW APE
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT----SQIPYAPMECVSAIFIKTVAVTVI 548
+ Y +D+WS G T+ E+LT SQ P P + + I I +TV+
Sbjct: 208 CLKEYKFYYA--SDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVL 258
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALL 384
Y +K LG G FG V Y+ +D G AVK + D G Q + S +QEI +L
Sbjct: 15 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKA-DCGPQHR---SGWKQEIDIL 70
Query: 385 SRFEHENIVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGL 442
HE+I++Y G D+ E L + +E V GSL + R+ + +Q+ + +QI G+
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGM 130
Query: 443 KYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-KLNDVKSCR----GTAFWMAPE 497
YLH Q +HR++ N+L+D + VK+ DFGLAKA + ++ R FW APE
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT----SQIPYAPMECVSAIFIKTVAVTVI 548
+ Y +D+WS G T+ E+LT SQ P P + + I I +TV+
Sbjct: 191 CLKEYKFYYA--SDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVL 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 111/209 (53%), Gaps = 25/209 (11%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG G++ +VY+G++ G + A+KEV L + +I +EI+L+ +HENIV+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI----REISLMKELKHENIVRL 68
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYH-----------LRDSQVSAYTRQILLGLKY 444
Y E+KL + E + N ++Y L + V + Q+L GL +
Sbjct: 69 YDVIHTENKLTLVFEFMD-----NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNK 502
H+ ++HRD+K N+L++ G +KL DFGLA+A +N S T ++ AP+V+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG- 182
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
++ Y DIWS GC + EM+T + P P
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK-PLFP 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 34/212 (16%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS---------------QLEQE 380
+LG+GSFG V F VK++S GS A+Q + + + E
Sbjct: 31 VLGQGSFGKV----------FLVKKIS----GSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQIL 439
+L H IV+ + + E KLY+ L+ + G L L + + V Y ++
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPE 497
L L +LH +++RD+K NIL+D G +KL DFGL+K + ++ K+ GT +MAPE
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 196
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
V+N +G+ AD WS G + EMLT +P+
Sbjct: 197 VVN--RRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+GRGSF +VY+G+ D V L D+ K + ++E L +H NIV++Y
Sbjct: 34 IGRGSFKTVYKGL-DTETTVEVAWCELQDR-KLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 397 ----GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHDQD-- 449
T K + + + EL T G+L +R+ + +V ++ RQIL GL++LH +
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPP 151
Query: 450 VVHRDIKCANILVDA-NGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGL 508
++HRD+KC NI + GSVK+ D GLA + + K+ GT + APE K Y
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEK---YDE 208
Query: 509 PADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
D+++ G LE TS+ PY+ + + I+
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIY 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 34/212 (16%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS---------------QLEQE 380
+LG+GSFG V F VK++S GS A+Q + + + E
Sbjct: 31 VLGQGSFGKV----------FLVKKIS----GSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQIL 439
+L H IV+ + + E KLY+ L+ + G L L + + V Y ++
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPE 497
L L +LH +++RD+K NIL+D G +KL DFGL+K + ++ K+ GT +MAPE
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 196
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
V+N +G+ AD WS G + EMLT +P+
Sbjct: 197 VVN--RRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 34/212 (16%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS---------------QLEQE 380
+LG+GSFG V F VK++S GS A+Q + + + E
Sbjct: 32 VLGQGSFGKV----------FLVKKIS----GSDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQIL 439
+L H IV+ + + E KLY+ L+ + G L L + + V Y ++
Sbjct: 78 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 137
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPE 497
L L +LH +++RD+K NIL+D G +KL DFGL+K + ++ K+ GT +MAPE
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 197
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
V+N +G+ AD WS G + EMLT +P+
Sbjct: 198 VVN--RRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 33 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 88 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 140
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 41 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 96 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 40 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 95 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 147
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 207
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 237
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 41 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 96 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI +E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 17/200 (8%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG GSFG V+ S +G ++A+K L + + + E +LS H I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMK--VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ------VSAYTRQILLGLKYLHDQD 449
+GT +D ++++ ++ + G L +L LR SQ Y ++ L L+YLH +D
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSL-----LRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLP 509
+++RD+K NIL+D NG +K+ DFG AK C GT ++APEV++ K Y
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-GTPDYIAPEVVS--TKPYNKS 183
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D WS G + EML P+
Sbjct: 184 IDWWSFGILIYEMLAGYTPF 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 15 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 70 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 122
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 182
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 68 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI +E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 68 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 18 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 73 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 18 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 73 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 13 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYL 445
+ G L +VT+ GS +LY H+ +++ RQ G+ YL
Sbjct: 68 LFMGYSTAPQ-----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++K Y +D+++ G + E++T Q+PY+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 25/207 (12%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G GSFG+VY+G AVK + ++D + Q+ E+A+L + H NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGDV--AVKILKVVDPTPEQFQA---FRNEVAVLRKTRHVNILLFM 98
Query: 397 GTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSAY-----TRQILLGLKYLHDQ 448
G ++ L +VT+ GS +LY+ H+++++ + RQ G+ YLH +
Sbjct: 99 GYMTKDN-----LAIVTQWCEGS--SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINNK-N 503
+++HRD+K NI + +VK+ DFGLA + + V+ G+ WMAPEVI + N
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPYA 530
+ +D++S G + E++T ++PY+
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYS 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 22/213 (10%)
Query: 331 WQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLE-QEIALLSRFE 388
++K D LG G F +VY+ + A+K++ L S+AK I++ +EI LL
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKL-GHRSEAKDGINRTALREIKLLQELS 70
Query: 389 HENIV---QYYGTDKDESKLYIFLE-----LVTKGSLLNLYQRYHLRDSQVSAYTRQILL 440
H NI+ +G + S ++ F+E ++ SL+ L S + AY L
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV-------LTPSHIKAYMLMTLQ 123
Query: 441 GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG--TAFWMAPEV 498
GL+YLH ++HRD+K N+L+D NG +KLADFGLAK+ + T ++ APE+
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 499 INNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + YG+ D+W++GC + E+L ++P+ P
Sbjct: 184 LFGA-RMYGVGVDMWAVGCILAELLL-RVPFLP 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 23/235 (9%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFF---FAVKEVSLLDQGSQAKQSISQL 377
N R+K + D LG G +VY +++D A+K + + + + ++++ +
Sbjct: 10 NERYKIV-------DKLGGGGMSTVY--LAEDTILNIKVAIKAIFIPPR--EKEETLKRF 58
Query: 378 EQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYT 435
E+E+ S+ H+NIV D+++ Y+ +E + +G L+ Y H L +T
Sbjct: 59 EREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYI-EGPTLSEYIESHGPLSVDTAINFT 117
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA---TKLNDVKSCRGTAF 492
QIL G+K+ HD +VHRDIK NIL+D+N ++K+ DFG+AKA T L GT
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTVAVTV 547
+ +PE K + DI+S+G + EML + P+ VS I IK + +V
Sbjct: 178 YFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-IAIKHIQDSV 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 72
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 73 AVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 189
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGM 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 29 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-----YTRQILLGLKYLHDQ 448
+ G + +L I + SL Y H +++ RQ G+ YLH +
Sbjct: 84 LFMGYST-KPQLAIVTQWCEGSSL---YHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI ++
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 505 G-YGLPADIWSLGCTVLEMLTSQIPYA 530
Y +D+++ G + E++T Q+PY+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 17 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSA-----YTRQILLGLKYL 445
+ G L +VT+ GS +LY H +++ RQ G+ YL
Sbjct: 72 LFMGYSTKPQ-----LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++ Y +D+++ G + E++T Q+PY+
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYS 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 68
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 69 AVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 185
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGM 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 76
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E + KGSLL+ + +LR Q+ + QI G+ Y+ + VHR
Sbjct: 77 AVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 193
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGM 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 70
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 71 AVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 187
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGM 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 76
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E + KGSLL+ + +LR Q+ + QI G+ Y+ + VHR
Sbjct: 77 AVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR--FTIKS 193
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGM 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 328
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 329 AVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 445
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGM 468
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G +G GSFG+VY+G + V +L+ + Q + + E+ +L + H NI+
Sbjct: 29 GQRIGSGSFGTVYKGK-----WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 394 QYYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQVSA-----YTRQILLGLKYL 445
+ G L +VT+ GS +LY H +++ RQ G+ YL
Sbjct: 84 LFMGYSTAPQ-----LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVINN 501
H + ++HRD+K NI + + +VK+ DFGLA + + + + G+ WMAPEVI
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQIPYA 530
++ Y +D+++ G + E++T Q+PY+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKIRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI +E ++KG LL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 84
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 202
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 84
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 202
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 245
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 246 AVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 362
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGM 385
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 84
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 202
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 208
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG+GSFG V + D V ++++ S + S + +E+ LL + +H NI++
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 396 YGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D S YI EL T G L + + +R + + +Q+ G+ Y+H ++VHRD
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 455 IKCANILVDA---NGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+K NIL+++ + +K+ DFGL+ + N +K GTA+++APEV+ Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT---YDEKC 203
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D+WS G + +L+ P+
Sbjct: 204 DVWSAGVILYILLSGTPPF 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 84
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 202
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 245
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 246 AVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 362
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGM 385
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 76
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE +G + Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMI--EGRMHDEKVDL 194
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 195 WSLGVLCYEFLVGKPPF 211
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN-SKG 208
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG+GSFG V + D V ++++ S + S + +E+ LL + +H NI++
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 396 YGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D S YI EL T G L + + +R + + +Q+ G+ Y+H ++VHRD
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 455 IKCANILVDA---NGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+K NIL+++ + +K+ DFGL+ + N +K GTA+++APEV+ Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT---YDEKC 203
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D+WS G + +L+ P+
Sbjct: 204 DVWSAGVILYILLSGTPPF 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 104
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 164 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 222
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 91
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN-SKG 209
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 86
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 204
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG+GSFG V + D V ++++ S + S + +E+ LL + +H NI++
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 396 YGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D S YI EL T G L + + +R + + +Q+ G+ Y+H ++VHRD
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 455 IKCANILVDA---NGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+K NIL+++ + +K+ DFGL+ + N +K GTA+++APEV+ Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT---YDEKC 203
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D+WS G + +L+ P+
Sbjct: 204 DVWSAGVILYILLSGTPPF 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 91
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 209
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 92
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 151
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 152 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 210
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 211 YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 83
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 142
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 143 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 201
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 202 YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 208
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 84
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 202
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 92
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 152 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 210
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 84
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 202
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 84
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 202
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFEHENI 392
G LG+G FG+VY F + + +L + K+ + QL +EI + S H NI
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKF--IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 76
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVV 451
++ Y D ++Y+ LE +G L Q++ D Q SA + ++ L Y H++ V+
Sbjct: 77 LRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVI 136
Query: 452 HRDIKCANILVDANGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
HRDIK N+L+ G +K+ADFG + A L C GT ++ PE+I K +
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-GTLDYLPPEMIEGKT--HDEKV 193
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D+W G E L P+
Sbjct: 194 DLWCAGVLCYEFLVGMPPF 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL----REIKILLRFRHENIIGI 90
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 208
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D+ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFEHENI 392
G LG+G FG+VY F + + +L + K+ + QL +EI + S H NI
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKF--IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 77
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVV 451
++ Y D ++Y+ LE +G L Q++ D Q SA + ++ L Y H++ V+
Sbjct: 78 LRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVI 137
Query: 452 HRDIKCANILVDANGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
HRDIK N+L+ G +K+ADFG + A L C GT ++ PE+I K +
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-GTLDYLPPEMIEGKT--HDEKV 194
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D+W G E L P+
Sbjct: 195 DLWCAGVLCYEFLVGMPPF 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLRHPNIL 75
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ +NG +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 193
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L P+
Sbjct: 194 WSLGVLCYEFLVGMPPF 210
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 337 LGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS+G + DG KE LD GS + L E+ LL +H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKE---LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 396 YG--TDKDESKLYIFLELVTKGSLLNLY-----QRYHLRDSQVSAYTRQILLGLKYLH-- 446
Y D+ + LYI +E G L ++ +R +L + V Q+ L LK H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 447 ---DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINN 501
V+HRD+K AN+ +D +VKL DFGLA+ ++ K GT ++M+PE +N
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNR 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
+ Y +DIWSLGC + E+ P+
Sbjct: 191 MS--YNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLRHPNIL 75
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ +NG +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMI--EGRMHDEKVDL 193
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L P+
Sbjct: 194 WSLGVLCYEFLVGMPPF 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 76
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE +G + Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 194
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 195 WSLGVLCYEFLVGKPPF 211
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 336 LLGRGSFGSVY--EGIS--DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
+LG G++G V+ IS D G +A+K + +AK + + L +
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
+V + + E+KL++ L+ + G L +L QR + +V Y +I+L L++LH +
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNKNKGYG 507
++RDIK NIL+D+NG V L DFGL+K ++ + GT +MAP+++ + G+
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 240
Query: 508 LPADIWSLGCTVLEMLTSQIPYA 530
D WSLG + E+LT P+
Sbjct: 241 KAVDWWSLGVLMYELLTGASPFT 263
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G ++ AVK L G+ S+ +E L+ +H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKT---LKPGTM---SVQAFLEEANLMKTLQHDKLVRLY 74
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + KGSLL+ + + ++ ++ QI G+ Y+ ++ +HR
Sbjct: 75 AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 134
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ AN+LV + K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN--FGCFTIKS 192
Query: 511 DIWSLGCTVLEMLT-SQIPY 529
D+WS G + E++T +IPY
Sbjct: 193 DVWSFGILLYEIVTYGKIPY 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 337 LGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS+G + DG KE LD GS + L E+ LL +H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKE---LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 396 YG--TDKDESKLYIFLELVTKGSLLNLY-----QRYHLRDSQVSAYTRQILLGLKYLH-- 446
Y D+ + LYI +E G L ++ +R +L + V Q+ L LK H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 447 ---DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINN 501
V+HRD+K AN+ +D +VKL DFGLA+ + K+ GT ++M+PE +N
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
+ Y +DIWSLGC + E+ P+
Sbjct: 191 MS--YNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 97
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 215
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 216 WSLGVLCYEFLVGKPPF 232
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 337 LGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G GS+G + DG KE LD GS + L E+ LL +H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKE---LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 396 YG--TDKDESKLYIFLELVTKGSLLNLY-----QRYHLRDSQVSAYTRQILLGLKYLH-- 446
Y D+ + LYI +E G L ++ +R +L + V Q+ L LK H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 447 ---DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAFWMAPEVINN 501
V+HRD+K AN+ +D +VKL DFGLA+ + K+ GT ++M+PE +N
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
+ Y +DIWSLGC + E+ P+
Sbjct: 191 MS--YNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 245
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 246 AVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 362
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGM 385
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFEHENIVQY 395
LG+G FG+VY F + + +L + K+ + QL +EI + S H NI++
Sbjct: 22 LGKGKFGNVYLAREKQNKF--IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVHRD 454
Y D ++Y+ LE +G L Q++ D Q SA + ++ L Y H++ V+HRD
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 455 IKCANILVDANGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
IK N+L+ G +K+ADFG + A L C GT ++ PE+I K + D+W
Sbjct: 140 IKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC-GTLDYLPPEMIEGKT--HDEKVDLW 196
Query: 514 SLGCTVLEMLTSQIPY 529
G E L P+
Sbjct: 197 CAGVLCYEFLVGMPPF 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KG LL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 80 AVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGM 219
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 68
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-XKY 187
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 188 YSTAVDIWSLGCIFAEMVT 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E V + + ++ + + +Y Q+L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 179
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 208
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 8/212 (3%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLS 385
++I + GDLLG GS+G V E + + ++ + + + +++EI LL
Sbjct: 2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61
Query: 386 RFEHENIVQYYGT--DKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLG 441
R H+N++Q ++++ K+Y+ +E G +L+ Q Y Q++ G
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL----NDVKSCRGTAFWMAPE 497
L+YLH Q +VH+DIK N+L+ G++K++ G+A+A + ++ +G+ + PE
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ N + G DIWS G T+ + T P+
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 64
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + + ++ + + +Y Q+L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 183
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX-KY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 111/203 (54%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L RF HENI+
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLRFRHENII 104
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +Y+ L+ L L + HL + + + QIL GLKY+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 222
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY + F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI--EGRMHDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 15/200 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G ++ AVK L G+ S+ +E L+ +H+ +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKT---LKPGTM---SVQAFLEEANLMKTLQHDKLVRLY 73
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + KGSLL+ + + ++ ++ QI G+ Y+ ++ +HR
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHR 133
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ AN+LV + K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAIN--FGCFTIKS 191
Query: 511 DIWSLGCTVLEMLT-SQIPY 529
++WS G + E++T +IPY
Sbjct: 192 NVWSFGILLYEIVTYGKIPY 211
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++G V + + A++++S + + ++++ +EI +L RF HENI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL----REIKILLRFRHENIIGI 90
Query: 396 YG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
T + +YI +L+ + L L + HL + + + QIL GLKY+H +V
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKG 505
+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +KG
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-SKG 208
Query: 506 YGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + EML+++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 10/200 (5%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 97
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 453 RDIKCANILVDANGSVKLADFGL---AKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLP 509
RDIK N+L+ + G +K+ADFG A +++ +D+ C GT ++ PE+I + + +
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL--C-GTLDYLPPEMI--EGRMHDEK 212
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D+WSLG E L + P+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPF 232
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 64
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E ++ ++ + + +Y Q+L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 183
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 65
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 184
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 185 YSTAVDIWSLGCIFAEMVT 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 63
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 182
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E ++ ++ + + +Y Q+L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 181
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 63
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 182
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 64
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 183
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 63
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E ++ ++ + + +Y Q+L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 182
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 63
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 182
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 179
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 68
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 187
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 188 YSTAVDIWSLGCIFAEMVT 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 179
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 64
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E ++ ++ + + +Y Q+L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 183
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 179
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMI--EGRMHDEKVDL 190
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 191 WSLGVLCYEFLVGKPPF 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 181
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 64
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 183
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 181
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 181
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 179
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGNMSPEAFLQ---EAQVMKKLRHEKLVQLY 246
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 247 AVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGL + + N+ + +G F W APE + + +
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKS 363
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGM 386
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 108/219 (49%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T +G GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +K+ADFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG+G FG V+ G + A+K L G+ + ++ Q E ++ + HE +VQ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQ---EAQVMKKLRHEKLVQLY 69
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E + I E ++KGSLL+ + +LR Q+ QI G+ Y+ + VHR
Sbjct: 70 AVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV N K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR--FTIKS 186
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E+ T ++PY M
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGM 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 65
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 184
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 185 YSTAVDIWSLGCIFAEMVT 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 88
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 89 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 206
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 207 WSLGVLCYEFLVGKPPF 223
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 192
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 193 WSLGVLCYEFLVGKPPF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 76
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 194
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 195 WSLGVLCYEFLVGKPPF 211
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 64
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E V + ++ + + +Y Q+L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 183
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G FA+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMI--EGRMHDEKVDL 190
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 191 WSLGVLCYEFLVGKPPF 207
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G FA+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 70
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 71 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 188
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 189 WSLGVLCYEFLVGKPPF 205
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 181
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G FA+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHFAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L F HENI+
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLAFRHENII 86
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 146 NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 204
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI--EGRMHDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+K++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVINNK 502
+ HRDIK N+L+D ++K++DFGLA + N+ + GT ++APE++ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL-KR 180
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + P D+WS G + ML ++P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 75
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + D+
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM--HDEKVDL 193
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 194 WSLGVLCYEFLVGKPPF 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMI--EGRMHDEKVDL 192
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 193 WSLGVLCYEFLVGKPPF 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMI--EGRMHDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVINNK 502
+ HRDIK N+L+D ++K++DFGLA + N+ + GT ++APE++ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL-KR 180
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + P D+WS G + ML ++P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEIXINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVINNK 502
+ HRDIK N+L+D ++K++DFGLA + N+ + GT ++APE++ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL-KR 180
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + P D+WS G + ML ++P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHE 390
+++G G FG VY F+ EV++ D Q+I + QE L + +H
Sbjct: 13 EIIGIGGFGKVYRA------FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
NI+ G E L + +E G L + + + + QI G+ YLHD+ +
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 451 V---HRDIKCANILV--------DANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
V HRD+K +NIL+ +N +K+ DFGLA+ S G WMAPEVI
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
G +D+WS G + E+LT ++P+
Sbjct: 187 RASMFSKG--SDVWSYGVLLWELLTGEVPF 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 192
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 193 WSLGVLCYEFLVGKPPF 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 76
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE I + + + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXI--EGRXHDEKVDL 194
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 195 WSLGVLCYEFLVGKPPF 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEIXINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVINNK 502
+ HRDIK N+L+D ++K++DFGLA + N+ + GT ++APE++ +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL-KR 181
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + P D+WS G + ML ++P+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 73
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI--EGRMHDEKVDL 191
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 192 WSLGVLCYEFLVGKPPF 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI--EGRMHDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI--EGRMHDEKVDL 190
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 191 WSLGVLCYEFLVGKPPF 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVINNK 502
+ HRDIK N+L+D ++K++DFGLA + N+ + GT ++APE++ +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL-KR 180
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + P D+WS G + ML ++P+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + + A+K++S + + ++++ +EI +L F HENI+
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTL----REIKILLAFRHENII 86
Query: 394 QYYG-----TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + HL + + + QIL GLKY+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ + + T ++ APE++ N +
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN-S 204
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
+Q+ LG G++G V + D + + ++ + S + S S+L +E+A+L +H
Sbjct: 39 YQRVKKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NI++ Y +D+ Y+ +E G L + + R + + +Q+L G+ YLH +
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 450 VVHRDIKCANILVDA---NGSVKLADFGLAKATK-LNDVKSCRGTAFWMAPEVINNKNKG 505
+VHRD+K N+L+++ + +K+ DFGL+ + +K GTA+++APEV+ K
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK--- 213
Query: 506 YGLPADIWSLGCTVLEMLTSQIPYA 530
Y D+WS+G + +L P+
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFG 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI + +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINAML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI--EGRMHDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 60
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 178
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 453 RDIKCANILVDANGSVKLADFGL---AKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLP 509
RDIK N+L+ + G +K+ADFG A +++ +D+ C GT ++ PE+I + +
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL--C-GTLDYLPPEMIEGRM--HDEK 189
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D+WSLG E L + P+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPF 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 114/237 (48%), Gaps = 17/237 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTVAVTV 547
++APE+I +KGY D W+LG + EM P+ E + I+ K V+ V
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ-IYEKIVSGKV 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 76
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI--EGRMHDEKVDL 194
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 195 WSLGVLCYEFLVGKPPF 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM--HDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 71
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + D+
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM--HDEKVDL 189
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 190 WSLGVLCYEFLVGKPPF 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEIXINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 76
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 77 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 193
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGM 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 83
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 84 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 200
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGM 223
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T +G GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E + G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +K+ADFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 79
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 80 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKS 196
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGM 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + GT ++ PE+I + + + D+
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMI--EGRMHDEKVDL 192
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 193 WSLGVLCYEFLVGKPPF 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 69
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 70 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKS 186
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGM 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 74
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 75 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 191
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 80
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 81 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 197
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGM 220
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 75
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 76 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 192
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGM 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 82
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 83 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 199
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGM 222
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T +G GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------IGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E + G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +K+ADFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 80
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 81 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKS 197
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGM 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 54 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 103
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 163
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 222
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 223 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 74
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 75 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT--FTIKS 191
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 74
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 75 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKS 191
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 62
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 180
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G++G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 84
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 85 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKS 201
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGM 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 73
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+A+FG + + + GT ++ PE+I + + + D+
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 191
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 192 WSLGVLCYEFLVGKPPF 208
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 68
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 69 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+ADFG + + + GT ++ PE+I + + + D+
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 186
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 187 WSLGVLCYEFLVGKPPF 203
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E G + + +R +
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFGLAK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 54 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 103
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 163
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 222
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 223 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 26 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 75
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 135
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 194
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 195 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 13/210 (6%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
++ +++G+G+F V I+ + G FAVK V + S S L++E ++ +H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL-LNLYQR----YHLRDSQVSAYTRQILLGLKY 444
+IV+ T + LY+ E + L + +R + ++ S Y RQIL L+Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 445 LHDQDVVHRDIKCANILV---DANGSVKLADFGLA-KATKLNDVKSCR-GTAFWMAPEVI 499
HD +++HRD+K N+L+ + + VKL DFG+A + + V R GT +MAPEV+
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K + YG P D+W G + +L+ +P+
Sbjct: 206 --KREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 26 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 75
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 135
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 194
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 195 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 10/213 (4%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQ 379
+GR K I ++ GD LG G+FG V G + G AVK ++ Q ++ + ++ +
Sbjct: 10 DGRVK--IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILN--RQKIRSLDVVGKIRR 65
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQI 438
EI L F H +I++ Y S +++ +E V+ G L + + + L + + +QI
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--KSCRGTAFWMAP 496
L G+ Y H VVHRD+K N+L+DA+ + K+ADFGL+ + SC G+ + AP
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC-GSPNYAAP 184
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
EVI+ + G DIWS G + +L +P+
Sbjct: 185 EVISGRLYA-GPEVDIWSSGVILYALLCGTLPF 216
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+ ++ L ++ + S +EI+LL H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL---DTETEGVPSTAIREISLLKELNH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 180
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+QK + +G G++G VY+ + G A+ ++ L ++ + S +EI+LL H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL---DTETEGVPSTAIREISLLKELNH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
NIV+ E+KLY+ E + + ++ + + +Y Q+L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA--TKLNDVKSCRGTAFWMAPEVINNKNKG 505
V+HRD+K N+L++ G++KLADFGLA+A + T ++ APE++ K
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKY 179
Query: 506 YGLPADIWSLGCTVLEMLT 524
Y DIWSLGC EM+T
Sbjct: 180 YSTAVDIWSLGCIFAEMVT 198
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 28 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 77
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 137
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 196
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 197 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALL 384
Y +K LG G FG V Y+ +D G AVK L +G Q S ++EI +L
Sbjct: 9 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA---LKEGC-GPQLRSGWQREIEIL 64
Query: 385 SRFEHENIVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGL 442
HE+IV+Y G D+ E + + +E V GSL + R+ + +Q+ + +QI G+
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGM 124
Query: 443 KYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-KLNDVKSCR----GTAFWMAPE 497
YLH Q +HR + N+L+D + VK+ DFGLAKA + ++ R FW APE
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT 524
+ Y +D+WS G T+ E+LT
Sbjct: 185 CLKECKFYYA--SDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALL 384
Y +K LG G FG V Y+ +D G AVK L +G Q S ++EI +L
Sbjct: 10 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA---LKEGC-GPQLRSGWQREIEIL 65
Query: 385 SRFEHENIVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGL 442
HE+IV+Y G D+ E + + +E V GSL + R+ + +Q+ + +QI G+
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGM 125
Query: 443 KYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-KLNDVKSCR----GTAFWMAPE 497
YLH Q +HR + N+L+D + VK+ DFGLAKA + ++ R FW APE
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 185
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT 524
+ Y +D+WS G T+ E+LT
Sbjct: 186 CLKECKFYYA--SDVWSFGVTLYELLT 210
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G LG+G FG+VY F +V Q +A QL +E+ + S H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLRHPNIL 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA-YTRQILLGLKYLHDQDVVH 452
+ YG D +++Y+ LE G++ Q+ D Q +A Y ++ L Y H + V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
RDIK N+L+ + G +K+A+FG + + + GT ++ PE+I + + + D+
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRMHDEKVDL 192
Query: 513 WSLGCTVLEMLTSQIPY 529
WSLG E L + P+
Sbjct: 193 WSLGVLCYEFLVGKPPF 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIRT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E + +V+ + KD S LY+ LE G + + +R +
Sbjct: 84 KQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +K+ADFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 76
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 197 K--FSVASDVWSFGVVLYELFT 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 75
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL Q++ R + YT QI G++YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 196 K--FSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 72
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 193 K--FSVASDVWSFGVVLYELFT 212
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 20 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 69
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 129
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 130 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-GT 188
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 189 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 75
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 196 K--FSVASDVWSFGVVLYELFT 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 54 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 103
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 163
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC-GT 222
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 223 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 71
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 192 K--FSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 77
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 198 K--FSVASDVWSFGVVLYELFT 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 19 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 68
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 69 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 128
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 129 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-GT 187
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 188 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 79
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 200 K--FSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 78
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 199 K--FSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 72
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 193 K--FSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 90
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 211 K--FSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 103
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 224 K--FSVASDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 70
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 191 K--FSVASDVWSFGVVLYELFT 210
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 21/203 (10%)
Query: 337 LGRGSFG---SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+G G++G S Y+ + A+K++S + + ++++ +EI +L RF HEN++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRV--AIKKISPFEHQTYCQRTL----REIQILLRFRHENVI 104
Query: 394 QYY-----GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
T + +YI +L+ + L L + L + + + QIL GLKY+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA 163
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAK-ATKLND----VKSCRGTAFWMAPEVINNKN 503
+V+HRD+K +N+L++ +K+ DFGLA+ A +D + T ++ APE++ N +
Sbjct: 164 NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN-S 222
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
KGY DIWS+GC + EML+++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 72
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 193 K--FSVASDVWSFGVVLYELFT 212
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHKETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 90
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 211 K--FSVASDVWSFGVVLYELFT 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ + AVK + GS S+ E ++ +H+ +V+ +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSM---SVEAFLAEANVMKTLQHDKLVKLH 76
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA---YTRQILLGLKYLHDQDVVHR 453
E +YI E + KGSLL+ + + ++ QI G+ ++ ++ +HR
Sbjct: 77 AVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 135
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV A+ K+ADFGLA+ + N+ + G F W APE IN + + + +
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKS 193
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G ++E++T +IPY M
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGM 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 337 LGRGSFGSVYEG--ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR---FEHEN 391
+G G++G V++ + + G F A+K V + Q + +S + +E+A+L FEH N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTI-REVAVLRHLETFEHPN 75
Query: 392 IVQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLK 443
+V+ + TD+ E+KL + E V + + L+ + + Q+L GL
Sbjct: 76 VVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNK 502
+LH VVHRD+K NILV ++G +KLADFGLA+ + S T ++ APEV+
Sbjct: 135 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS 194
Query: 503 NKGYGLPADIWSLGCTVLEML 523
+ Y P D+WS+GC EM
Sbjct: 195 S--YATPVDLWSVGCIFAEMF 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 70
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 71 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
+++ ANILV S K+ADFGLA+ + N+ + G F W APE IN + + +
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIKS 187
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGM 210
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--ISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 337 LGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR---FEHENI 392
+G G++G+VY+ G F A+K V + + G +E+ALL R FEH N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 393 VQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
V+ TD+ E K+ + E V + + L+ L + RQ L GL +
Sbjct: 77 VRLMDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWM-APEVINNKN 503
LH +VHRD+K NILV + G+VKLADFGLA+ + W APEV+
Sbjct: 136 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST 195
Query: 504 KGYGLPADIWSLGCTVLEML 523
Y P D+WS+GC EM
Sbjct: 196 --YATPVDMWSVGCIFAEMF 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 17/208 (8%)
Query: 331 WQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
W LG G+ G V ++++ AVK V + +A +++EI +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAV--AVKIVDM----KRAVDCPENIKKEICINKML 61
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
HEN+V++YG ++ + Y+FLE + G L + + + + + Q++ G+ YLH
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KSCRGTAFWMAPEVINN 501
+ HRDIK N+L+D ++K++DFGLA + N+ K C GT ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELL-K 179
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + + P D+WS G + ML ++P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E G + + +R +
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +++ DFGLAK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 337 LGRGSFGSVYEG--ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL--LSRFEHENI 392
+G G++G V++ + + G F A+K V + Q + +S + + L L FEH N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 393 VQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
V+ + TD+ E+KL + E V + + L+ + + Q+L GL +
Sbjct: 77 VRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKN 503
LH VVHRD+K NILV ++G +KLADFGLA+ + S T ++ APEV+ +
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 504 KGYGLPADIWSLGCTVLEML 523
Y P D+WS+GC EM
Sbjct: 196 --YATPVDLWSVGCIFAEMF 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + +M P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 337 LGRGSFGSVYEG--ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL--LSRFEHENI 392
+G G++G V++ + + G F A+K V + Q + +S + + L L FEH N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 393 VQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
V+ + TD+ E+KL + E V + + L+ + + Q+L GL +
Sbjct: 77 VRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKN 503
LH VVHRD+K NILV ++G +KLADFGLA+ + S T ++ APEV+ +
Sbjct: 136 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS 195
Query: 504 KGYGLPADIWSLGCTVLEML 523
Y P D+WS+GC EM
Sbjct: 196 --YATPVDLWSVGCIFAEMF 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 28/248 (11%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGS 368
P + + P KR + + LG G FG V Y+ D+ G AVK + G+
Sbjct: 9 PATEVDPTHFEKRFLKRIRD---LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN 65
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYG--TDKDESKLYIFLELVTKGSLLNLY--QRY 424
I+ L++EI +L HENIV+Y G T+ + + + +E + GSL +
Sbjct: 66 H----IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN 121
Query: 425 HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND- 483
+ Q Y QI G+ YL + VHRD+ N+LV++ VK+ DFGL KA + +
Sbjct: 122 KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
Query: 484 ---VKSCRGT-AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAI 538
VK R + FW APE + + + +D+WS G T+ E+LT +PM A+
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSK--FYIASDVWSFGVTLHELLTYCDSDSSPM----AL 235
Query: 539 FIKTVAVT 546
F+K + T
Sbjct: 236 FLKMIGPT 243
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 25/204 (12%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ Q S Q ++EI +L +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQ-RDFQREIQILKALHSDF 69
Query: 392 IVQY----YGTDKDESKLYIFLELVTKGSLLNLYQRYHLR--DSQVSAYTRQILLGLKYL 445
IV+Y YG + E L + +E + G L + QR+ R S++ Y+ QI G++YL
Sbjct: 70 IVKYRGVSYGPGRPE--LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCR----GTAFWMAPEVIN 500
+ VHRD+ NILV++ VK+ADFGLAK L+ D R FW APE ++
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 501 NKNKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 188 DNI--FSRQSDVWSFGVVLYELFT 209
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEI 381
+++ ++ G+ LG G F V + G +A K + Q +++ +S ++E+E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK-RQSRASRRGVSREEIEREV 66
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++L + H N++ + ++ + + + LELV+ G L + L Q+ L + + +++ +QIL
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 441 GLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKLN-DVKSCRGTAFWMA 495
G+ YLH + + H D+K NI L+D N +KL DFGLA + + K+ GT ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
PE++N + GL AD+WS+G +L+ P+
Sbjct: 187 PEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEI 381
+++ ++ G+ LG G F V + G +A K + Q +++ +S ++E+E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK-RQSRASRRGVSREEIEREV 66
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++L + H N++ + ++ + + + LELV+ G L + L Q+ L + + +++ +QIL
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 441 GLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKLN-DVKSCRGTAFWMA 495
G+ YLH + + H D+K NI L+D N +KL DFGLA + + K+ GT ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
PE++N + GL AD+WS+G +L+ P+
Sbjct: 187 PEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEI 381
+++ ++ G+ LG G F V + G +A K + Q +++ +S ++E+E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK-RQSRASRRGVSREEIEREV 66
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++L + H N++ + ++ + + + LELV+ G L + L Q+ L + + +++ +QIL
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 441 GLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKLN-DVKSCRGTAFWMA 495
G+ YLH + + H D+K NI L+D N +KL DFGLA + + K+ GT ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
PE++N + GL AD+WS+G +L+ P+
Sbjct: 187 PEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVK----EVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
+LG+GSFG V + + G +AVK +V L D + + E+ I L+R H
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMT----EKRILSLAR-NHP 84
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD-SQVSAYTRQILLGLKYLHDQD 449
+ Q + + +L+ +E V G L+ Q+ D ++ Y +I+ L +LHD+
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPEVINNKNKGYG 507
+++RD+K N+L+D G KLADFG+ K N V + GT ++APE++ + YG
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL--QEMLYG 202
Query: 508 LPADIWSLGCTVLEMLTSQIPY 529
D W++G + EML P+
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPF 224
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFEHENIVQY 395
+G G++G VY+ ++ G FA+K++ L + + I S +EI++L +H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 396 YGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
Y + +L + E + + LL++ + L ++ Q+L G+ Y HD+ V+HR
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG--TAFWMAPEVINNKNKGYGLPAD 511
D+K N+L++ G +K+ADFGLA+A + K T ++ AP+V+ K Y D
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK-YSTTID 183
Query: 512 IWSLGCTVLEMLT 524
IWS+GC EM+
Sbjct: 184 IWSVGCIFAEMVN 196
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFEHENIVQY 395
+G G++G VY+ ++ G FA+K++ L + + I S +EI++L +H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 396 YGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
Y + +L + E + + LL++ + L ++ Q+L G+ Y HD+ V+HR
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG--TAFWMAPEVINNKNKGYGLPAD 511
D+K N+L++ G +K+ADFGLA+A + K T ++ AP+V+ K Y D
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK-YSTTID 183
Query: 512 IWSLGCTVLEMLT 524
IWS+GC EM+
Sbjct: 184 IWSVGCIFAEMVN 196
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFEHENIVQY 395
+G G++G VY+ ++ G FA+K++ L + + I S +EI++L +H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 396 YGTDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
Y + +L + E + + LL++ + L ++ Q+L G+ Y HD+ V+HR
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG--TAFWMAPEVINNKNKGYGLPAD 511
D+K N+L++ G +K+ADFGLA+A + K T ++ AP+V+ K Y D
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK-YSTTID 183
Query: 512 IWSLGCTVLEMLT 524
IWS+GC EM+
Sbjct: 184 IWSVGCIFAEMVN 196
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 23/204 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G+ +G G FG VY+G ++ K +++D ++ + Q +QEI ++++ +HEN+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ--QFDQEIKVMAKCQHENLV 93
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ--------RYHLRDSQVSAYTRQILLGLKYL 445
+ G D L + + GSLL+ +H+R G+ +L
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN----GINFL 149
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCR--GTAFWMAPEVINN 501
H+ +HRDIK ANIL+D + K++DFGLA+A++ V R GT +MAPE +
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-- 207
Query: 502 KNKGYGLP-ADIWSLGCTVLEMLT 524
+G P +DI+S G +LE++T
Sbjct: 208 --RGEITPKSDIYSFGVVLLEIIT 229
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEALAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ + AVK + GS S+ E ++ +H+ +V+ +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSM---SVEAFLAEANVMKTLQHDKLVKLH 249
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS---QVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + KGSLL+ + ++ ++ QI G+ ++ ++ +HR
Sbjct: 250 AVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 308
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV A+ K+ADFGLA+ + N+ + G F W APE IN + + + +
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKS 366
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G ++E++T +IPY M
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGM 389
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEI 381
+++ ++ G+ LG G F V + G +A K + Q +++ +S ++E+E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK-RQSRASRRGVSREEIEREV 66
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++L + H N++ + ++ + + + LELV+ G L + L Q+ L + + +++ +QIL
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 441 GLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKLN-DVKSCRGTAFWMA 495
G+ YLH + + H D+K NI L+D N +KL DFGLA + + K+ GT ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
PE++N + GL AD+WS+G +L+ P+
Sbjct: 187 PEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWXLXGT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 119/214 (55%), Gaps = 12/214 (5%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEI 381
+++ ++ G+ LG G F V + G +A K + Q +++ +S ++E+E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK-RQSRASRRGVSREEIEREV 66
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++L + H N++ + ++ + + + LELV+ G L + L Q+ L + + +++ +QIL
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 441 GLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKLN-DVKSCRGTAFWMA 495
G+ YLH + + H D+K NI L+D N +KL DFGLA + + K+ GT ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
PE++N + GL AD+WS+G +L+ P+
Sbjct: 187 PEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV G AVK++S + Q+ + +E+ LL +H
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 109
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ + L F + LVT L N+ + L D V QIL GLKY
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 169
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 227
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y + DIWS+GC + E+LT +
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGR 249
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 23/204 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G+ +G G FG VY+G ++ K +++D ++ + Q +QEI ++++ +HEN+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ--QFDQEIKVMAKCQHENLV 93
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ--------RYHLRDSQVSAYTRQILLGLKYL 445
+ G D L + + GSLL+ +H+R G+ +L
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN----GINFL 149
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCR--GTAFWMAPEVINN 501
H+ +HRDIK ANIL+D + K++DFGLA+A++ V R GT +MAPE +
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-- 207
Query: 502 KNKGYGLP-ADIWSLGCTVLEMLT 524
+G P +DI+S G +LE++T
Sbjct: 208 --RGEITPKSDIYSFGVVLLEIIT 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 26/223 (11%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ Q S Q ++EI +L +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQ-RDFQREIQILKALHSDF 72
Query: 392 IVQYYGTDKDESK--LYIFLELVTKGSLLNLYQRYHLR--DSQVSAYTRQILLGLKYLHD 447
IV+Y G + L + +E + G L + QR+ R S++ Y+ QI G++YL
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCR----GTAFWMAPEVINNK 502
+ VHRD+ NILV++ VK+ADFGLAK L+ D R FW APE +++
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPYAPMECV-SAIFIKTVA 544
+ +D+WS G + E+ T Y C SA F++ +
Sbjct: 193 I--FSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMG 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWXLAGT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 190 -YEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 26/224 (11%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ Q S Q ++EI +L +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQ-RDFQREIQILKALHSDF 73
Query: 392 IVQYYGTDKDESK--LYIFLELVTKGSLLNLYQRYHLR--DSQVSAYTRQILLGLKYLHD 447
IV+Y G + L + +E + G L + QR+ R S++ Y+ QI G++YL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCR----GTAFWMAPEVINNK 502
+ VHRD+ NILV++ VK+ADFGLAK L+ D R FW APE +++
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPYAPMECV-SAIFIKTVAV 545
+ +D+WS G + E+ T Y C SA F++ +
Sbjct: 194 I--FSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGC 231
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 23/204 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G+ +G G FG VY+G ++ K +++D ++ + Q +QEI ++++ +HEN+V
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ--QFDQEIKVMAKCQHENLV 87
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ--------RYHLRDSQVSAYTRQILLGLKYL 445
+ G D L + + GSLL+ +H+R G+ +L
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN----GINFL 143
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCR--GTAFWMAPEVINN 501
H+ +HRDIK ANIL+D + K++DFGLA+A++ V R GT +MAPE +
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-- 201
Query: 502 KNKGYGLP-ADIWSLGCTVLEMLT 524
+G P +DI+S G +LE++T
Sbjct: 202 --RGEITPKSDIYSFGVVLLEIIT 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 33 PSQNTAQLDQFDRIKT-------LGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKL 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L +V+ + KD S LY+ +E V G + + +R +
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+L+D G +++ DFG AK K C GT
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-GT 201
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++AP +I +KGY D W+LG + EM P+
Sbjct: 202 PEYLAPAII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 10/215 (4%)
Query: 323 RFKRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQE 380
R + + Y+ G+ LG G F V + G +A K + + S+ S +E+E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQIL 439
+++L +H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 440 LGLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWM 494
G+ YLH + H D+K NI L+D N +K+ DFGLA N+ K+ GT ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
APE++N + GL AD+WS+G +L+ P+
Sbjct: 185 APEIVN--YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 113/224 (50%), Gaps = 26/224 (11%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ Q S Q ++EI +L +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQ-RDFQREIQILKALHSDF 85
Query: 392 IVQYYGTDKDESK--LYIFLELVTKGSLLNLYQRYHLR--DSQVSAYTRQILLGLKYLHD 447
IV+Y G + L + +E + G L + QR+ R S++ Y+ QI G++YL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCR----GTAFWMAPEVINNK 502
+ VHRD+ NILV++ VK+ADFGLAK L+ D R FW APE +++
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPYAPMECV-SAIFIKTVAV 545
+ +D+WS G + E+ T Y C SA F++ +
Sbjct: 206 I--FSRQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGC 243
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 189
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 190 -YEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 73
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q++ R + YT QI G++YL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HR++ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 194 K--FSVASDVWSFGVVLYELFT 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG+G+FGSV Y+ + D+ G AVK++ ++ + E+EI +L +H+N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-----HSTEEHLRDFEREIEILKSLQHDN 75
Query: 392 IVQYYGT--DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--AYTRQILLGLKYLHD 447
IV+Y G L + +E + GSL + Q + R + YT QI G++YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKS-CRGTAFWMAPEVINNK 502
+ +HRD+ NILV+ VK+ DFGL K + VK FW APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 503 NKGYGLPADIWSLGCTVLEMLT 524
+ + +D+WS G + E+ T
Sbjct: 196 K--FSVASDVWSFGVVLYELFT 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 118/214 (55%), Gaps = 12/214 (5%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSI--SQLEQEI 381
+++ ++ G+ LG G F V + G +A K + Q +++ + ++E+E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKK-RQSRASRRGVCREEIEREV 66
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++L + H NI+ + ++ + + + LELV+ G L + L Q+ L + + +++ +QIL
Sbjct: 67 SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 441 GLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKLN-DVKSCRGTAFWMA 495
G+ YLH + + H D+K NI L+D N +KL DFGLA + + K+ GT ++A
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
PE++N + GL AD+WS+G +L+ P+
Sbjct: 187 PEIVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L + + + KD S LY+ +E G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR---FEHENI 392
+G G++G+VY+ G F A+K V + + IS + +E+ALL R FEH N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTV-REVALLRRLEAFEHPNV 68
Query: 393 VQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
V+ TD+ E K+ + E V + + L+ L + RQ L GL +
Sbjct: 69 VRLMDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWM-APEVINNKN 503
LH +VHRD+K NILV + G+VKLADFGLA+ + W APEV+
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQST 187
Query: 504 KGYGLPADIWSLGCTVLEML 523
Y P D+WS+GC EM
Sbjct: 188 --YATPVDMWSVGCIFAEMF 205
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L + + + KD S LY+ +E G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 25/225 (11%)
Query: 337 LGRGSFGSV----YEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
LG G FG V Y+ D+ G AVK + G+ I+ L++EI +L HEN
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH----IADLKKEIEILRNLYHEN 72
Query: 392 IVQYYG--TDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHD 447
IV+Y G T+ + + + +E + GSL + + Q Y QI G+ YL
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGT-AFWMAPEVINNK 502
+ VHRD+ N+LV++ VK+ DFGL KA + + VK R + FW APE +
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 503 NKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAIFIKTVAVT 546
+ + +D+WS G T+ E+LT +PM A+F+K + T
Sbjct: 193 K--FYIASDVWSFGVTLHELLTYCDSDSSPM----ALFLKMIGPT 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 314 PMSNISPNGRFKRIITYWQKGDLLGRGSFGSVY-EGISDDGFFFAVKEVSLLDQGSQAK- 371
P N + +F+RI T LG GSFG V + G +A+K +LD+ K
Sbjct: 34 PAQNTAHLDQFERIKT-------LGTGSFGRVMLVKHMETGNHYAMK---ILDKQKVVKL 83
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQ 430
+ I E +L + + + KD S LY+ +E G + + +R +
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
Y QI+L +YLH D+++RD+K N+++D G +K+ DFG AK K C GT
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-GT 202
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE+I +KGY D W+LG + EM P+
Sbjct: 203 PEYLAPEII--LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 330 YWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRF 387
Y+ G+ LG G F V + G +A K + + S+ S +E+E+++L
Sbjct: 12 YYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H N++ + ++++ + + LELV G L + L ++ L + + + + +QIL G+ YLH
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 447 DQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINN 501
+ H D+K NI L+D N +K+ DFGLA N+ K+ GT ++APE++N
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN- 190
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ GL AD+WS+G +L+ P+
Sbjct: 191 -YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 11/225 (4%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQ 379
+GR K I ++ GD LG G+FG V G G AVK ++ Q ++ + ++++
Sbjct: 5 DGRVK--IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN--RQKIRSLDVVGKIKR 60
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA--YTRQ 437
EI L F H +I++ Y + ++ +E V+ G L + Y H R ++ A +Q
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD-YICKHGRVEEMEARRLFQQ 119
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGTAFWMAP 496
IL + Y H VVHRD+K N+L+DA+ + K+ADFGL+ + +++ G+ + AP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
EVI+ + G DIWS G + +L +P+ E V +F K
Sbjct: 180 EVISGRLYA-GPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKK 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 331 WQKGDLLGRGSFGSVYEG---ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
+ K D LG G++ +VY+G ++D+ A+KE+ L + +I +E++LL
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDN--LVALKEIRLEHEEGAPCTAI----REVSLLKDL 57
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTK---------GSLLNLYQRYHLRDSQVSAYTRQI 438
+H NIV + E L + E + K G+++N++ V + Q+
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN--------VKLFLFQL 109
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL-NDVKSCRGTAFWMAPE 497
L GL Y H Q V+HRD+K N+L++ G +KLADFGLA+A + W P
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP 169
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECV 535
I + Y D+W +GC EM T + P P V
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGR-PLFPGSTV 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG+G+F V + G FA K +++ + + +LE+E + + +H NIV+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAK---IINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 396 YGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ + ++ES Y+ +LVT G L ++ R ++ S +QIL + Y H +VHR+
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 153
Query: 455 IKCANILVDA---NGSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNKNKGYGL 508
+K N+L+ + +VKLADFGL A ++ND ++ GT +++PEV+ K Y
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFAGTPGYLSPEVL--KKDPYSK 209
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
P DIW+ G + +L P+
Sbjct: 210 PVDIWACGVILYILLVGYPPF 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 41/221 (18%)
Query: 336 LLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LG+G+FG V + + D ++A+K++ ++ +S + E+ LL+ H+ +V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR------HTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 395 YYGT-------------DKDESKLYIFLELVTKGSLLNLYQRYHL---RDSQVSAYTRQI 438
YY K +S L+I +E G+L +L +L RD + RQI
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-RQI 125
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-------KL---------N 482
L L Y+H Q ++HRD+K NI +D + +VK+ DFGLAK KL +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 483 DVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
++ S GTA ++A EV++ Y D++SLG EM+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEMI 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L +++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 164 TFGNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L +++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 164 TFGNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 117/212 (55%), Gaps = 18/212 (8%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEIAL 383
+++ G+ LG G F V +G + +K+ L S +++ +S ++E+E+ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRL----SSSRRGVSREEIEREVNI 61
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGL 442
L H NI+ + ++++ + + LELV+ G L + L ++ L + + + + +QIL G+
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 443 KYLHDQDVVHRDIKCANI-LVDA---NGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPE 497
YLH + + H D+K NI L+D N +KL DFG+A K N+ K+ GT ++APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++N + GL AD+WS+G +L+ P+
Sbjct: 182 IVN--YEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 44 VRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L +++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 164 TFGNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 19/200 (9%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR---FEHENI 392
+G G++G+VY+ G F A+K V + + IS + +E+ALL R FEH N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTV-REVALLRRLEAFEHPNV 68
Query: 393 VQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
V+ TD+ E K+ + E V + + L+ L + RQ L GL +
Sbjct: 69 VRLMDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKN 503
LH +VHRD+K NILV + G+VKLADFGLA+ + T ++ APEV+
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQST 187
Query: 504 KGYGLPADIWSLGCTVLEML 523
Y P D+WS+GC EM
Sbjct: 188 --YATPVDMWSVGCIFAEMF 205
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 319 SPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQL 377
+ N F+ + Y G L+G GS+G V + + D G A+K+ D K+ +
Sbjct: 16 TENLYFQSMEKYENLG-LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR- 73
Query: 378 EQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTR 436
EI LL + HEN+V K + + Y+ E V L +L + D QV Y
Sbjct: 74 --EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK--ATKLNDVKSCRGTAFWM 494
QI+ G+ + H +++HRDIK NILV +G VKL DFG A+ A T ++
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
APE++ K YG D+W++GC V EM + P P
Sbjct: 192 APELLVGDVK-YGKAVDVWAIGCLVTEMFMGE-PLFP 226
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQ 379
+GR K I ++ GD LG G+FG V G G AVK ++ Q ++ + ++++
Sbjct: 5 DGRVK--IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN--RQKIRSLDVVGKIKR 60
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA--YTRQ 437
EI L F H +I++ Y + ++ +E V+ G L + Y H R ++ A +Q
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD-YICKHGRVEEMEARRLFQQ 119
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--KSCRGTAFWMA 495
IL + Y H VVHRD+K N+L+DA+ + K+ADFGL+ + SC G+ + A
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC-GSPNYAA 178
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIK 541
PEVI+ + G DIWS G + +L +P+ E V +F K
Sbjct: 179 PEVISGRLYA-GPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKK 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG+G+F V + G FA K +++ + + +LE+E + + +H NIV+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAK---IINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 396 YGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ + ++ES Y+ +LVT G L ++ R ++ S +QIL + Y H +VHR+
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 129
Query: 455 IKCANILVDAN---GSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNKNKGYGL 508
+K N+L+ + +VKLADFGL A ++ND ++ GT +++PEV+ K Y
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFAGTPGYLSPEVL--KKDPYSK 185
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
P DIW+ G + +L P+
Sbjct: 186 PVDIWACGVILYILLVGYPPF 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 117/212 (55%), Gaps = 18/212 (8%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEIAL 383
+++ G+ LG G F V +G + +K+ L S +++ +S ++E+E+ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRL----SSSRRGVSREEIEREVNI 68
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGL 442
L H NI+ + ++++ + + LELV+ G L + L ++ L + + + + +QIL G+
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 443 KYLHDQDVVHRDIKCANI-LVDA---NGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPE 497
YLH + + H D+K NI L+D N +KL DFG+A K N+ K+ GT ++APE
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 188
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++N + GL AD+WS+G +L+ P+
Sbjct: 189 IVN--YEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNA-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%), Gaps = 15/218 (6%)
Query: 321 NGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS-QLEQ 379
N F+ + +Q+ LG G++G V + D A + + ++ + S S S L
Sbjct: 13 NLYFQGLSDRYQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLD 70
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN---LYQRYHLRDSQVSAYTR 436
E+A+L + +H NI++ Y +D+ Y+ +E+ G L + L Q++ D+ V +
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV--IMK 128
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDA---NGSVKLADFGLAKATKL-NDVKSCRGTAF 492
Q+L G YLH ++VHRD+K N+L+++ + +K+ DFGL+ ++ +K GTA+
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 188
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV+ K Y D+WS G + +L P+
Sbjct: 189 YIAPEVLRKK---YDEKCDVWSCGVILYILLCGYPPFG 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 86
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 204
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG+G+F V + G FA K +++ + + +LE+E + + +H NIV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAK---IINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 396 YGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ + ++ES Y+ +LVT G L ++ R ++ S +QIL + Y H +VHR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 455 IKCANILVDAN---GSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNKNKGYGL 508
+K N+L+ + +VKLADFGL A ++ND ++ GT +++PEV+ K Y
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFAGTPGYLSPEVL--KKDPYSK 186
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
P DIW+ G + +L P+
Sbjct: 187 PVDIWACGVILYILLVGYPPF 207
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L +++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + + G + APE+ K K G D+WSLG + +++ +P+
Sbjct: 164 TFGNKLDAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQ 394
++GRG+FG V + V + LL + K+S S E + F + +VQ
Sbjct: 82 VIGRGAFGEV--QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D+ LY+ +E + G L+NL Y + + YT +++L L +H ++HRD
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRD 199
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNK--NKGYGLP 509
+K N+L+D +G +KLADFG + C GT +++PEV+ ++ + YG
Sbjct: 200 VKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D WS+G + EML P+
Sbjct: 260 CDWWSVGVFLFEMLVGDTPF 279
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG+G+F V + G FA K +++ + + +LE+E + + +H NIV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAK---IINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 396 YGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ + ++ES Y+ +LVT G L ++ R ++ S +QIL + Y H +VHR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 455 IKCANILVDAN---GSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNKNKGYGL 508
+K N+L+ + +VKLADFGL A ++ND ++ GT +++PEV+ K Y
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFAGTPGYLSPEVL--KKDPYSK 186
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
P DIW+ G + +L P+
Sbjct: 187 PVDIWACGVILYILLVGYPPF 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 44 VRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 103
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L +++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 104 LVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 164 TFGNKLDEFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 200
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 66/264 (25%)
Query: 330 YWQKGDLL------------GRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAK---QSI 374
Y+Q G LL G+GS+G V I + A++ + ++++ + + +
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTR--AIRAIKIMNKNKIRQINPKDV 72
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY---------- 424
+++ E+ L+ + H NI + Y +DE + + +EL G LL+ +
Sbjct: 73 ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 425 ----------------------H---------LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
H R+ +S RQI L YLH+Q + HR
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192
Query: 454 DIKCANILVDANGS--VKLADFGLAKA-TKLND-----VKSCRGTAFWMAPEVINNKNKG 505
DIK N L N S +KL DFGL+K KLN+ + + GT +++APEV+N N+
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
YG D WS G + +L +P+
Sbjct: 253 YGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 14/210 (6%)
Query: 330 YWQKGDLLGRGSFGSV----YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLS 385
+++ G+ LG G F V +G + +K+ L S+ S ++E+E+ +L
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRL--XSSRRGVSREEIEREVNILR 84
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKY 444
H NI+ + ++++ + + LELV+ G L + L ++ L + + + + +QIL G+ Y
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 445 LHDQDVVHRDIKCANI-LVDA---NGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVI 499
LH + + H D+K NI L+D N +KL DFG+A K N+ K+ GT ++APE++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + GL AD+WS+G +L+ P+
Sbjct: 205 N--YEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ G + A+K L G+ + +S + E ++ + +H+ +VQ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT---LKPGTMSPESFLE---EAQIMKKLKHDKLVQLY 70
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
+E +YI E + KGSLL+ + L+ + Q+ G+ Y+ + +HR
Sbjct: 71 AVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV K+ADFGLA+ + N+ + +G F W APE + + +
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR--FTIKS 187
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T ++PY M
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGM 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR---FEHENI 392
+G G++G+VY+ G F A+K V + + IS + +E+ALL R FEH N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTV-REVALLRRLEAFEHPNV 68
Query: 393 VQYYG------TDKDESKLYIFLELVTKG--SLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
V+ TD+ E K+ + E V + + L+ L + RQ L GL +
Sbjct: 69 VRLMDVCATSRTDR-EIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWM-APEVINNKN 503
LH +VHRD+K NILV + G+VKLADFGLA+ W APEV+
Sbjct: 128 LHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQST 187
Query: 504 KGYGLPADIWSLGCTVLEML 523
Y P D+WS+GC EM
Sbjct: 188 --YATPVDMWSVGCIFAEMF 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 34 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K S GTA +++PE++ K+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 212 SKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA-DEMTGYVATRWYRAPEIMLNW-M 205
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 37 VKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 96
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L +++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 97 LVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 156
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 157 TFGNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 45 VKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDY 104
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA-KA 478
L +++ + A RQI+ ++Y H + +VHRD+K N+L+D + ++K+ADFG + +
Sbjct: 105 LVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF 164
Query: 479 TKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
T N + + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 165 TVGNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGXVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA-DEMTGYVATRWYRAPEIMLNW-M 205
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA-DEMTGYVATRWYRAPEIMLNW-M 205
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 194
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 91
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 209
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 147
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 205
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 200
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 100
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 218
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 103
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNWMH 222
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 223 -YNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 99
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNWMH 218
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 219 -YNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 79
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 139
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 197
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---KPFQSIIHAKRTYRELRLLKHMKH 92
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 210
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 77
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 195
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 35 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K S GTA +++PE++ K+
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 213 CKS--SDLWALGCIIYQLVAGLPPF 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 77
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 137
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 195
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 78
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 138
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 196
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGR 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGL + T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 92
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 210
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 92
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 152
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 210
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 200
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 91
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 151
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 209
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 86
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 204
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 86
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 204
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 142
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 200
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 194
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 100
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGXVATRWYRAPEIMLNWMH 219
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 220 -YNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 194
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFVATRWYRAPEIMLNW-M 194
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 103
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 163
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGYVATRWYRAPEIMLNW-M 221
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 100
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNWMH 219
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 220 -YNQTVDIWSVGCIMAELLTGR 240
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 99
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNWMH 218
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 219 -YNQTVDIWSVGCIMAELLTGR 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 337 LGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++GSV + G AVK++S + Q+ + +E+ LL +HEN++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 396 YGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
L F + LVT L N+ + L D V QIL GLKY+H D+
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 156
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N Y
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-MHYNQTV 214
Query: 511 DIWSLGCTVLEMLTSQ 526
DIWS+GC + E+LT +
Sbjct: 215 DIWSVGCIMAELLTGR 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 86
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DFGLA+ T +++ T ++ APE++ N
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 204
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 10/215 (4%)
Query: 323 RFKRIITYWQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVS-LLDQGSQAKQSISQLEQE 380
R + + Y+ G+ LG G F V + G +A K + + S+ S +E+E
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIERE 64
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQIL 439
+++L +H N++ + ++++ + + ELV G L + L ++ L + + + + +QIL
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 440 LGLKYLHDQDVVHRDIKCANI-LVDAN---GSVKLADFGLAKATKL-NDVKSCRGTAFWM 494
G+ YLH + H D+K NI L+D N +K+ DFGLA N+ K+ GT ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
APE++N + GL AD+WS+G +L+ P+
Sbjct: 185 APEIVN--YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q LLG G++G V G A+K++ D+ A +++ +EI +L F+H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 390 ENIVQYYGTDKDES-----KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
ENI+ + + +S ++YI EL+ + L + L D + + Q L +K
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT------------KLNDVKSCRGTAF 492
LH +V+HRD+K +N+L+++N +K+ DFGLA+ + + + T +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
+ APEV+ K Y D+WS GC + E+
Sbjct: 188 YRAPEVMLTSAK-YSRAMDVWSCGCILAELF 217
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + AVK ++ +GS ++ Q Q + LS H +V++Y
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK---MIKEGSMSEDEFFQEAQTMMKLS---HPKLVKFY 69
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
G E +YI E ++ G LLN Y R H L SQ+ + G+ +L +HR
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLN-YLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D+ N LVD + VK++DFG+ + + S GT F W APEV + Y +
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK--YSSKS 186
Query: 511 DIWSLGCTVLEMLT-SQIPY 529
D+W+ G + E+ + ++PY
Sbjct: 187 DVWAFGILMWEVFSLGKMPY 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G G V+ G + AVK L QGS + + E L+ + +H+ +V+ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKS---LKQGSMSPDAFLA---EANLMKQLQHQRLVRLY 74
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + GSL++ + L +++ QI G+ ++ +++ +HR
Sbjct: 75 AVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
D++ ANILV S K+ADFGLA+ + + + G F W APE IN + + +
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT--FTIKS 191
Query: 511 DIWSLGCTVLEMLT-SQIPYAPM 532
D+WS G + E++T +IPY M
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGM 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSIS-QLEQEIALLSRFE 388
+Q LG GSFG V + G A+K ++++ AK + ++E+EI+ L
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALK---IINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
H +I++ Y K + ++ + +E + QR + + + + +QI+ ++Y H
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNKGYG 507
+VHRD+K N+L+D + +VK+ADFGL+ T N +K+ G+ + APEVI+ K G
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA-G 181
Query: 508 LPADIWSLGCTVLEMLTSQIPY 529
D+WS G + ML ++P+
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPF 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 12 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 190 CKS--SDLWALGCIIYQLVAGLPPF 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 12/200 (6%)
Query: 335 DLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
++LG G+F V+ G FA+K + + S A + S LE EIA+L + +HENIV
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCI----KKSPAFRD-SSLENEIAVLKKIKHENIV 69
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ + Y+ ++LV+ G L + + +R + S +Q+L +KYLH+ +VH
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 453 RDIKCANILV---DANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N+L + N + + DFGL+K + + + GT ++APEV+ K Y
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVL--AQKPYSKA 187
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D WS+G +L P+
Sbjct: 188 VDCWSIGVITYILLCGYPPF 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q LLG G++G V G A+K++ D+ A +++ +EI +L F+H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 390 ENIVQYYGTDKDES-----KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
ENI+ + + +S ++YI EL+ + L + L D + + Q L +K
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT------------KLNDVKSCRGTAF 492
LH +V+HRD+K +N+L+++N +K+ DFGLA+ + + + T +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
+ APEV+ K Y D+WS GC + E+
Sbjct: 188 YRAPEVMLTSAK-YSRAMDVWSCGCILAELF 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ D+GLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 34 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 212 XKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 111/205 (54%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 32 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K + GTA +++PE++ K+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 210 CKS--SDLWALGCIIYQLVAGLPPF 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
++ +++G+G F V I+ + G FAVK V + S S L++E ++ +H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL-LNLYQR----YHLRDSQVSAYTRQILLGLKY 444
+IV+ T + LY+ E + L + +R + ++ S Y RQIL L+Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 445 LHDQDVVHRDIKCANILV---DANGSVKLADFGLA-KATKLNDVKSCR-GTAFWMAPEVI 499
HD +++HRD+K +L+ + + VKL FG+A + + V R GT +MAPEV+
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K + YG P D+W G + +L+ +P+
Sbjct: 208 --KREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 15/208 (7%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS-QLEQEIALLSRFEH 389
+Q+ LG G++G V + D A + + ++ + S S S L E+A+L + +H
Sbjct: 6 YQRVKKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLN---LYQRYHLRDSQVSAYTRQILLGLKYLH 446
NI++ Y +D+ Y+ +E+ G L + L Q++ D+ V +Q+L G YLH
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV--IMKQVLSGTTYLH 121
Query: 447 DQDVVHRDIKCANILVDA---NGSVKLADFGLAKATKL-NDVKSCRGTAFWMAPEVINNK 502
++VHRD+K N+L+++ + +K+ DFGL+ ++ +K GTA+++APEV+ K
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 181
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPYA 530
Y D+WS G + +L P+
Sbjct: 182 ---YDEKCDVWSCGVILYILLCGYPPFG 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSIS-QLEQEIALLS 385
I +Q LG GSFG V + G A+K ++++ AK + ++E+EI+ L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK---IINKKVLAKSDMQGRIEREISYLR 69
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYL 445
H +I++ Y K + ++ + +E + QR + + + + +QI+ ++Y
Sbjct: 70 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 129
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNK 504
H +VHRD+K N+L+D + +VK+ADFGL+ T N +K+ G+ + APEVI+ K
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
G D+WS G + ML ++P+
Sbjct: 190 A-GPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSIS-QLEQEIALLS 385
I +Q LG GSFG V + G A+K ++++ AK + ++E+EI+ L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK---IINKKVLAKSDMQGRIEREISYLR 68
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYL 445
H +I++ Y K + ++ + +E + QR + + + + +QI+ ++Y
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 128
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNK 504
H +VHRD+K N+L+D + +VK+ADFGL+ T N +K+ G+ + APEVI+ K
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
G D+WS G + ML ++P+
Sbjct: 189 A-GPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 84
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K S GTA +++PE++
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 205 EKSACKS--SDLWALGCIIYQLVAGLPPF 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQ 394
++GRG+FG V + V + LL + K+S S E + F + +VQ
Sbjct: 81 VIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D+ LY+ +E + G L+NL Y + + YT +++L L +H +HRD
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNK--NKGYGLP 509
+K N+L+D +G +KLADFG + C GT +++PEV+ ++ + YG
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D WS+G + EML P+
Sbjct: 259 CDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQ 394
++GRG+FG V + V + LL + K+S S E + F + +VQ
Sbjct: 76 VIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D+ LY+ +E + G L+NL Y + + YT +++L L +H +HRD
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 193
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNK--NKGYGLP 509
+K N+L+D +G +KLADFG + C GT +++PEV+ ++ + YG
Sbjct: 194 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D WS+G + EML P+
Sbjct: 254 CDWWSVGVFLYEMLVGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQ 394
++GRG+FG V + V + LL + K+S S E + F + +VQ
Sbjct: 81 VIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ +D+ LY+ +E + G L+NL Y + + YT +++L L +H +HRD
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCR---GTAFWMAPEVINNK--NKGYGLP 509
+K N+L+D +G +KLADFG + C GT +++PEV+ ++ + YG
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D WS+G + EML P+
Sbjct: 259 CDWWSVGVFLYEMLVGDTPF 278
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q LLG G++G V G A+K++ D+ A +++ +EI +L F+H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 390 ENIVQYYGTDKDES-----KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
ENI+ + + +S ++YI EL+ + L + L D + + Q L +K
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR------------GTAF 492
LH +V+HRD+K +N+L+++N +K+ DFGLA+ + + T +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
+ APEV+ K Y D+WS GC + E+
Sbjct: 188 YRAPEVMLTSAK-YSRAMDVWSCGCILAELF 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 337 LGRGSFGSVYEGISDDGF---FFAVKEVSLLDQG--SQAKQSISQLEQEI----ALLSRF 387
LG G++G V +G V + S D+G S ++I + +EI +LL
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H NI++ + +D+ Y+ E G L + R+ + + +QIL G+ YLH
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 447 DQDVVHRDIKCANILVDANGS---VKLADFGL----AKATKLNDVKSCRGTAFWMAPEVI 499
++VHRDIK NIL++ S +K+ DFGL +K KL D GTA+++APEV+
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---LGTAYYIAPEVL 220
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
K Y D+WS G + +L P+
Sbjct: 221 KKK---YNEKCDVWSCGVIMYILLCGYPPFG 248
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 64
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 185 EKSACKS--SDLWALGCIIYQLVAGLPPF 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSIS-QLEQEIALLS 385
I +Q LG GSFG V + G A+K ++++ AK + ++E+EI+ L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK---IINKKVLAKSDMQGRIEREISYLR 63
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYL 445
H +I++ Y K + ++ + +E + QR + + + + +QI+ ++Y
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 123
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNK 504
H +VHRD+K N+L+D + +VK+ADFGL+ T N +K+ G+ + APEVI+ K
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
G D+WS G + ML ++P+
Sbjct: 184 A-GPEVDVWSCGVILYVMLCRRLPF 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 23/215 (10%)
Query: 327 IITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSL---LDQGSQAKQSISQLEQEIA 382
+ Y+ + LG G+FG V+ + G F K ++ LD+ + ++ EI+
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT--------VKNEIS 100
Query: 383 LLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYTRQILL 440
++++ H ++ + +D+ ++ + LE ++ G L + + Y + +++V Y RQ
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 160
Query: 441 GLKYLHDQDVVHRDIKCANILVDAN--GSVKLADFGLAKATKLND---VKSCRGTAFWMA 495
GLK++H+ +VH DIK NI+ + SVK+ DFGL ATKLN VK TA + A
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL--ATKLNPDEIVKVTTATAEFAA 218
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
PE+++ + G+ D+W++G +L+ P+A
Sbjct: 219 PEIVDREPVGFY--TDMWAIGVLGYVLLSGLSPFA 251
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGF-FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
++K + +G G++G+V++ + + A+K V L D S + EI LL +H
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHD 447
+NIV+ + + KL + E + L + + L V ++ Q+L GL + H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGY 506
++V+HRD+K N+L++ NG +KLADFGLA+A + S W P + K Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
D+WS GC E+ + P P
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFP 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 41/221 (18%)
Query: 336 LLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LG+G+FG V + + D ++A+K++ ++ +S + E+ LL+ H+ +V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR------HTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 395 YYGT-------------DKDESKLYIFLELVTKGSLLNLYQRYHL---RDSQVSAYTRQI 438
YY K +S L+I +E +L +L +L RD + RQI
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-RQI 125
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-------KL---------N 482
L L Y+H Q ++HRD+K NI +D + +VK+ DFGLAK KL +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 483 DVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
++ S GTA ++A EV++ Y D++SLG EM+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEMI 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
++ +++G+G F V I+ + G FAVK V + S S L++E ++ +H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL-LNLYQR----YHLRDSQVSAYTRQILLGLKY 444
+IV+ T + LY+ E + L + +R + ++ S Y RQIL L+Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 445 LHDQDVVHRDIKCANILV---DANGSVKLADFGLA-KATKLNDVKSCR-GTAFWMAPEVI 499
HD +++HRD+K +L+ + + VKL FG+A + + V R GT +MAPEV+
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K + YG P D+W G + +L+ +P+
Sbjct: 206 --KREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 62
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 183 EKSACKS--SDLWALGCIIYQLVAGLPPF 209
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 37 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 215 CKS--SDLWALGCIIYQLVAGLPPF 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 35 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 213 CKS--SDLWALGCIIYQLVAGLPPF 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 34 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 212 CKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 32 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 210 CKS--SDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 34 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 212 CKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 23/206 (11%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQ--LEQEIALLSRFEHE 390
+LG+GSFG V + I+ G AVK +S Q KQ + L +E+ LL + +H
Sbjct: 57 VLGKGSFGEVILCKDKIT--GQECAVKVIS----KRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NI++ Y +D+ Y+ E+ T G L + + R + + RQ+L G+ Y+H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 450 VVHRDIKCANILVDA---NGSVKLADFGLA---KATKLNDVKSCRGTAFWMAPEVINNKN 503
+VHRD+K N+L+++ + ++++ DFGL+ +A+K +K GTA+++APEV++
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVLHGT- 227
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D+WS G + +L+ P+
Sbjct: 228 --YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 63
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 184 EKSACKS--SDLWALGCIIYQLVAGLPPF 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 87
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 208 EKSACKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 23/206 (11%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQ--LEQEIALLSRFEHE 390
+LG+GSFG V + I+ G AVK +S Q KQ + L +E+ LL + +H
Sbjct: 56 VLGKGSFGEVILCKDKIT--GQECAVKVIS----KRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NI++ Y +D+ Y+ E+ T G L + + R + + RQ+L G+ Y+H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 450 VVHRDIKCANILVDA---NGSVKLADFGLA---KATKLNDVKSCRGTAFWMAPEVINNKN 503
+VHRD+K N+L+++ + ++++ DFGL+ +A+K +K GTA+++APEV++
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVLHGT- 226
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D+WS G + +L+ P+
Sbjct: 227 --YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 32 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 210 CKS--SDLWALGCIIYQLVAGLPPF 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 23/206 (11%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQ--LEQEIALLSRFEHE 390
+LG+GSFG V + I+ G AVK +S Q KQ + L +E+ LL + +H
Sbjct: 33 VLGKGSFGEVILCKDKIT--GQECAVKVIS----KRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NI++ Y +D+ Y+ E+ T G L + + R + + RQ+L G+ Y+H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 450 VVHRDIKCANILVDA---NGSVKLADFGLA---KATKLNDVKSCRGTAFWMAPEVINNKN 503
+VHRD+K N+L+++ + ++++ DFGL+ +A+K +K GTA+++APEV++
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVLHGT- 203
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D+WS G + +L+ P+
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 72
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 73 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 131
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 190
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 191 -FTSASDVWMFGVCMWEIL 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 34 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 212 CKS--SDLWALGCIIYQLVAGLPPF 234
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
+ ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 42 IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDY 101
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA-KA 478
L +++ + + RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG + +
Sbjct: 102 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 161
Query: 479 TKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
T + + G+ + APE+ K K G D+WSLG + +++ +P+
Sbjct: 162 TVGGKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 98
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 99 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 157
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 216
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 217 -FTSASDVWMFGVCMWEIL 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHD 447
H +V + + ES+L+ +E V G L+ QR L + Y+ +I L L YLH+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCR-GTAFWMAPEVINNKNKG 505
+ +++RD+K N+L+D+ G +KL D+G+ K + D S GT ++APE++ + +
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL--RGED 229
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
YG D W+LG + EM+ + P+
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 337 LGRGSFGSVY--EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG G+FG V+ E S G +K ++ +++ + Q+E EI +L +H NI++
Sbjct: 30 LGSGAFGDVHLVEERSS-GLERVIKTIN----KDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLR-----DSQVSAYTRQILLGLKYLHDQD 449
+ +D +YI +E G LL R + V+ +Q++ L Y H Q
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 450 VVHRDIKCANIL---VDANGSVKLADFGLAKATKLNDVKS-CRGTAFWMAPEVINNKNKG 505
VVH+D+K NIL + +K+ DFGLA+ K ++ + GTA +MAPEV +
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF---KRD 201
Query: 506 YGLPADIWSLGCTVLEMLTSQIPYA 530
DIWS G + +LT +P+
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 188
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 189 -FTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 75
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 76 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 134
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 193
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 194 -FTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 73
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 74 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 132
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 191
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 192 -FTSASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 188
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 189 -FTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 67
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q +Y L + + Y Q+ L YL
Sbjct: 68 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 185
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 186 -FTSASDVWMFGVCMWEIL 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE---IALLSRFEHEN 391
++GRG FG VY +D G +A+K L + + KQ + E ++L+S +
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
IV KL L+L+ G L +L Q ++ + Y +I+LGL+++H++ V
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 312
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
V+RD+K ANIL+D +G V+++D GLA + GT +MAPEV+ K Y A
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDSSA 371
Query: 511 DIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTVAVTVIIIL 551
D +SLGC + ++L P+ + I + +T+ + L
Sbjct: 372 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 412
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 110/204 (53%), Gaps = 19/204 (9%)
Query: 336 LLGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQ--LEQEIALLSRFEHE 390
+LG+GSFG V + D G AVK +S Q KQ + L +E+ LL + +H
Sbjct: 39 VLGKGSFGEVI--LCKDKITGQECAVKVIS----KRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NI++ Y +D+ Y+ E+ T G L + + R + + RQ+L G+ Y+H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 450 VVHRDIKCANILVDA---NGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKG 505
+VHRD+K N+L+++ + ++++ DFGL+ + + +K GTA+++APEV++
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--- 209
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
Y D+WS G + +L+ P+
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 8/221 (3%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE---IALLSRFEHEN 391
++GRG FG VY +D G +A+K L + + KQ + E ++L+S +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
IV KL L+L+ G L +L Q ++ + Y +I+LGL+++H++ V
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
V+RD+K ANIL+D +G V+++D GLA + GT +MAPEV+ K Y A
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDSSA 372
Query: 511 DIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTVAVTVIIIL 551
D +SLGC + ++L P+ + I + +T+ + L
Sbjct: 373 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 413
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 69
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 70 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 190 EKSACKS--SDLWALGCIIYQLVAGLPPF 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 335 DLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+ LG G+F V G FAVK + + + K+S +E EIA+L + +HENIV
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVK--CIPKKALKGKES--SIENEIAVLRKIKHENIV 83
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ + LY+ ++LV+ G L + + ++ + S RQ+L + YLH +VH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 453 RDIKCANILV---DANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAPEVINNKNKGYGL 508
RD+K N+L D + ++DFGL+K DV S GT ++APEV+ K Y
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL--AQKPYSK 201
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D WS+G +L P+
Sbjct: 202 AVDCWSIGVIAYILLCGYPPF 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 330 YWQKGDL------LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIA 382
++Q DL LG GSF + + FAVK +S K+ + ++EI
Sbjct: 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIIS--------KRMEANTQKEIT 57
Query: 383 LLSRFE-HENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
L E H NIV+ + D+ ++ +EL+ G L + ++ H +++ S R+++
Sbjct: 58 ALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS 117
Query: 441 GLKYLHDQDVVHRDIKCANILV---DANGSVKLADFGLAKATKLND--VKSCRGTAFWMA 495
+ ++HD VVHRD+K N+L + N +K+ DFG A+ ++ +K+ T + A
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA----PMECVSAIFI 540
PE++N GY D+WSLG + ML+ Q+P+ + C SA+ I
Sbjct: 178 PELLN--QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V ++D+ S+ +L +E+ + H NIV+ + + E LY+ E + G + +
Sbjct: 44 VKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDY 103
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT 479
L ++ + A RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG +
Sbjct: 104 LVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEF 163
Query: 480 KL-NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N + + G + APE+ K K G D+WSLG + +++ +P+
Sbjct: 164 TFGNKLDAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
+ ++D+ S+ +L +E+ ++ H NIV+ + + E LY+ +E + G + +
Sbjct: 45 IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDY 104
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA-KA 478
L +++ + + RQI+ ++Y H + +VHRD+K N+L+DA+ ++K+ADFG + +
Sbjct: 105 LVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164
Query: 479 TKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
T + + G + APE+ K K G D+WSLG + +++ +P+
Sbjct: 165 TVGGKLDAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHD 447
H +V + + ES+L+ +E V G L+ QR L + Y+ +I L L YLH+
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKS--CRGTAFWMAPEVINNKNK 504
+ +++RD+K N+L+D+ G +KL D+G+ K + D S C GT ++APE++ + +
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIAPEIL--RGE 196
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
YG D W+LG + EM+ + P+
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 70
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 130
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S RG+ F W PEV+ + +D
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK--FSSKSD 188
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 189 IWAFGVLMWEIYSLGKMPY 207
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ FGLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE---IALLSRFEHEN 391
++GRG FG VY +D G +A+K L + + KQ + E ++L+S +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
IV KL L+L+ G L +L Q ++ + Y +I+LGL+++H++ V
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
V+RD+K ANIL+D +G V+++D GLA + GT +MAPEV+ K Y A
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDSSA 372
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D +SLGC + ++L P+
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE---IALLSRFEHEN 391
++GRG FG VY +D G +A+K L + + KQ + E ++L+S +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
IV KL L+L+ G L +L Q ++ + Y +I+LGL+++H++ V
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
V+RD+K ANIL+D +G V+++D GLA + GT +MAPEV+ K Y A
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDSSA 372
Query: 511 DIWSLGCTVLEMLTSQIPY 529
D +SLGC + ++L P+
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G FG VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 19 LGGGQFGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY- 184
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 185 NK-FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q ++ L + + Y Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATK-LNDVKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + K+ +G WMAPE IN +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR- 188
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 189 -FTSASDVWMFGVCMWEIL 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHD 447
H +V + + ES+L+ +E V G L+ QR L + Y+ +I L L YLH+
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKS--CRGTAFWMAPEVINNKNK 504
+ +++RD+K N+L+D+ G +KL D+G+ K + D S C GT ++APE++ + +
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIAPEIL--RGE 185
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
YG D W+LG + EM+ + P+
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHD 447
H +V + + ES+L+ +E V G L+ QR L + Y+ +I L L YLH+
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKS--CRGTAFWMAPEVINNKNK 504
+ +++RD+K N+L+D+ G +KL D+G+ K + D S C GT ++APE++ + +
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIAPEIL--RGE 181
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
YG D W+LG + EM+ + P+
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 331 WQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLS 385
++ G +LG GSF +V S + +A+K +L++ K++ + + +E ++S
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSRE---YAIK---ILEKRHIIKENKVPYVTRERDVMS 84
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKY 444
R +H V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+Y
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVIN 500
LH + ++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K+ +D+W+LGC + +++ P+
Sbjct: 205 EKSACKS--SDLWALGCIIYQLVAGLPPF 231
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 19 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI +E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY- 184
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 185 NK-FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 21 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI +E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY- 186
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 21 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI +E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY- 186
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF + ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 32 FKFGKILGEGSFSTTV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y T +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 210 CKS--SDLWALGCIIYQLVAGLPPF 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ D GLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ D GLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%), Gaps = 14/162 (8%)
Query: 379 QEIALLSRF-EHENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYT 435
+EI +L R+ +H NI+ D +Y+ EL+ G LL+ L Q++ + + SA
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSEREASAVL 122
Query: 436 RQILLGLKYLHDQDVVHRDIKCANIL-VDANG---SVKLADFGLAKATKLND---VKSCR 488
I ++YLH Q VVHRD+K +NIL VD +G S+++ DFG AK + + + C
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 489 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
TA ++APEV+ + +GY DIWSLG + MLT P+A
Sbjct: 183 -TANFVAPEVL--ERQGYDAACDIWSLGVLLYTMLTGYTPFA 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++GRG+FG V + + +A+K ++ + +A+ + + E+++ L + + I
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV--LVNGDCQWITA 138
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ +DE+ LY+ ++ G LL L ++ L + Y +++L + +H VH
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR-----GTAFWMAPEVINNKNKG-- 505
RDIK N+L+D NG ++LADFG K+ND + + GT +++PE++ G
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 506 -YGLPADIWSLGCTVLEMLTSQIPY 529
YG D WSLG + EML + P+
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 22/214 (10%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
++ ++K +G+G+FG V++ G A+K+V L + + I+ L +EI +L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITAL-REIKILQL 73
Query: 387 FEHENIVQYYGT--------DKDESKLYI---FLELVTKGSLLNLYQRYHLRDSQVSAYT 435
+HEN+V ++ ++ +Y+ F E G L N+ ++ L S++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 131
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-----DVKSCRGT 490
+ +L GL Y+H ++HRD+K AN+L+ +G +KLADFGLA+A L + R
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
W P + + YG P D+W GC + EM T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 19 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY- 184
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 185 NK-FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGF-FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
++K + +G G++G+V++ + + A+K V L D S + EI LL +H
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKH 60
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHD 447
+NIV+ + + KL + E + L + + L V ++ Q+L GL + H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGY 506
++V+HRD+K N+L++ NG +KLA+FGLA+A + S W P + K Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
D+WS GC E+ + P P
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFP 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 12/211 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFF-FAVKEVSLLDQGSQAKQSISQLEQ----EIALLS 385
++ ++LGRG V I +AVK + + GS + + + +L + E+ +L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 386 RFE-HENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLK 443
+ H NI+Q T + + ++ +L+ KG L + L ++ L + + R +L +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVI--- 499
LH ++VHRD+K NIL+D + ++KL DFG + + ++S GT ++APE+I
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 500 -NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N+ + GYG D+WS G + +L P+
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
++ ++K +G+G+FG V++ G A+K+V L + + I+ L +EI +L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITAL-REIKILQL 73
Query: 387 FEHENIVQYYGT--------DKDESKLYI---FLELVTKGSLLNLYQRYHLRDSQVSAYT 435
+HEN+V ++ + +Y+ F E G L N+ ++ L S++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 131
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-----DVKSCRGT 490
+ +L GL Y+H ++HRD+K AN+L+ +G +KLADFGLA+A L + R
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
W P + + YG P D+W GC + EM T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ DF LA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGI-SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q +G G++GSV + G AVK++S + Q+ + +E+ LL +H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS---RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 390 ENIVQYYGTDKDESKLYIF--LELVTK---GSLLNLYQRYHLRDSQVSAYTRQILLGLKY 444
EN++ L F + LVT L N+ + L D V QIL GLKY
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+H D++HRD+K +N+ V+ + +K+ D GLA+ T +++ T ++ APE++ N
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD-DEMTGYVATRWYRAPEIMLNW-M 198
Query: 505 GYGLPADIWSLGCTVLEMLTSQ 526
Y DIWS+GC + E+LT +
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
++ ++K +G+G+FG V++ G A+K+V L + + I+ L +EI +L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITAL-REIKILQL 72
Query: 387 FEHENIVQYYGT--------DKDESKLYI---FLELVTKGSLLNLYQRYHLRDSQVSAYT 435
+HEN+V ++ + +Y+ F E G L N+ ++ L S++
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 130
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-----DVKSCRGT 490
+ +L GL Y+H ++HRD+K AN+L+ +G +KLADFGLA+A L + R
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
W P + + YG P D+W GC + EM T
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 109/205 (53%), Gaps = 10/205 (4%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-ISQLEQEIALLSRFEH 389
++ G +LG GSF +V ++ + + +L++ K++ + + +E ++SR +H
Sbjct: 39 FKFGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-AYTRQILLGLKYLHDQ 448
V+ Y +D+ KLY L G LL ++ D + YT +I+ L+YLH +
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA----TKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K NIL++ + +++ DFG AK +K GTA +++PE++ K+
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
+D+W+LGC + +++ P+
Sbjct: 217 CKS--SDLWALGCIIYQLVAGLPPF 239
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 26 LGGGQYGEVYEGV--------WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY- 191
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 192 NK-FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 337 LGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAK--QSISQLEQEIALLSRFEHENIV 393
+G+G FG V++G + D A+K + L D + + + + ++E+ ++S H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQD-- 449
+ YG + ++ +E V G L + L + + ++ S I LG++Y+ +Q+
Sbjct: 87 KLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 450 VVHRDIKCANILV---DANGSV--KLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+VHRD++ NI + D N V K+ADFGL++ + ++ V G WMAPE I + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-VHSVSGLLGNFQWMAPETIGAEEE 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
Y AD +S + +LT + P+
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 21 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY- 186
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++GRG+FG V + + +A+K ++ + +A+ + + E+++ L + + I
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV--LVNGDCQWITA 154
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ +DE+ LY+ ++ G LL L ++ L + Y +++L + +H VH
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 214
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR-----GTAFWMAPEVINNKNKG-- 505
RDIK N+L+D NG ++LADFG K+ND + + GT +++PE++ G
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 506 -YGLPADIWSLGCTVLEMLTSQIPY 529
YG D WSLG + EML + P+
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 26 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI +E +T G+LL+ + R + + QI ++YL ++
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNK-FS 195
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 22 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI +E +T G+LL+ + R + + QI ++YL ++
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY-NK-FS 191
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 12 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K+ GT ++APEV+ + + YG
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKTFCGTPEYLAPEVLEDND--YGR 184
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
++ ++K +G+G+FG V++ G A+K+V L + + I+ L +EI +L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITAL-REIKILQL 73
Query: 387 FEHENIVQYYGT--------DKDESKLYI---FLELVTKGSLLNLYQRYHLRDSQVSAYT 435
+HEN+V ++ + +Y+ F E G L N+ ++ L S++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVM 131
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-----DVKSCRGT 490
+ +L GL Y+H ++HRD+K AN+L+ +G +KLADFGLA+A L + R
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
W P + + YG P D+W GC + EM T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 15 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 130
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K+ GT ++APEV+ + + YG
Sbjct: 131 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKTFCGTPEYLAPEVLEDND--YGR 187
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPF 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVK-EVSLLDQGSQAKQS----------ISQLEQEIALLS 385
L +G F + D+ F+ K E SLL++ +S + E+ +++
Sbjct: 39 LNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIIT 98
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYT---------R 436
++E + G + ++YI E + S+L + + + D + + +
Sbjct: 99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158
Query: 437 QILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
+L Y+H++ ++ HRD+K +NIL+D NG VKL+DFG ++ +K RGT +M
Sbjct: 159 SVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMP 218
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
PE +N++ G DIWSLG + M + +P++
Sbjct: 219 PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 450
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q ++ L + + Y Q+ L YL
Sbjct: 451 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV +N VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 568
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 569 -FTSASDVWMFGVCMWEIL 586
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 21 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY- 186
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 187 NK-FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFF-FAVKEVSLLDQGSQAKQSISQLEQ----EIALLS 385
++ ++LGRG V I +AVK + + GS + + + +L + E+ +L
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 386 RFE-HENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLK 443
+ H NI+Q T + + ++ +L+ KG L + L ++ L + + R +L +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFG----LAKATKLNDVKSCRGTAFWMAPEVI 499
LH ++VHRD+K NIL+D + ++KL DFG L KL +V C GT ++APE+I
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV--C-GTPSYLAPEII 195
Query: 500 ----NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N+ + GYG D+WS G + +L P+
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V+ + AVK + GS S+ E ++ +H+ +V+ +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSM---SVEAFLAEANVMKTLQHDKLVKLH 243
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS---QVSAYTRQILLGLKYLHDQDVVHR 453
E +YI E + KGSLL+ + ++ ++ QI G+ ++ ++ +HR
Sbjct: 244 AVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR 302
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIW 513
D++ ANILV A+ K+ADFGLA+ +K W APE IN + + + +D+W
Sbjct: 303 DLRAANILVSASLVCKIADFGLARVGAKFPIK-------WTAPEAINFGS--FTIKSDVW 353
Query: 514 SLGCTVLEMLT-SQIPYAPM 532
S G ++E++T +IPY M
Sbjct: 354 SFGILLMEIVTYGRIPYPGM 373
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 325 KRIITYWQKGDLLGRGSFGSV-----YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ 379
KR I + + LG GSFG V Y+ F ++ LL + ++E+
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ--LLKKSDMH----MRVER 58
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQIL 439
EI+ L H +I++ Y + + + +E + ++ + + + + +QI+
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEV 498
++Y H +VHRD+K N+L+D N +VK+ADFGL+ T N +K+ G+ + APEV
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 499 INNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
IN K G D+WS G + ML ++P+
Sbjct: 179 INGKLYA-GPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 70
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q ++ L + + Y Q+ L YL
Sbjct: 71 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV A VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 188
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 189 -FTSASDVWMFGVCMWEIL 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 12 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K+ GT ++APEV+ + + YG
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKTFCGTPEYLAPEVLEDND--YGR 184
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 34/234 (14%)
Query: 336 LLGRGSFGSVYEGI--SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
++G G FG VY+G+ + G + L G KQ + L E ++ +F H NI+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFL-GEAGIMGQFSHHNII 109
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQDVV 451
+ G + I E + G+L + S Q+ R I G+KYL + + V
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF------WMAPEVINNKNKG 505
HRD+ NILV++N K++DFGL++ + +D ++ T+ W APE I+ +
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEATYTTSGGKIPIRWTAPEAISYRK-- 226
Query: 506 YGLPADIWSLGCTVLEMLT-SQIPY-------------------APMECVSAIF 539
+ +D+WS G + E++T + PY PM+C SAI+
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 334 GDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
G++LG+G FG + + G +KE+ D+ +Q +E+ ++ EH N+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-----RTFLKEVKVMRCLEHPNV 69
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD--SQVSAYTRQILLGLKYLHDQDV 450
+++ G + +L E + G+L + + + SQ ++ + I G+ YLH ++
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 451 VHRDIKCANILVDANGSVKLADFGLAK-----ATKLNDVKSCR-----------GTAFWM 494
+HRD+ N LV N +V +ADFGLA+ T+ ++S + G +WM
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEML 523
APE+IN ++ Y D++S G + E++
Sbjct: 190 APEMINGRS--YDEKVDVFSFGIVLCEII 216
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G+ G G FG VY+G ++ K +++D ++ + Q +QEI + ++ +HEN+V
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ--QFDQEIKVXAKCQHENLV 84
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ--------RYHLRDSQVSAYTRQILLGLKYL 445
+ G D L + GSLL+ +H R G+ +L
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAAN----GINFL 140
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCR--GTAFWMAPEVINN 501
H+ +HRDIK ANIL+D + K++DFGLA+A++ V R GT + APE +
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-- 198
Query: 502 KNKGYGLP-ADIWSLGCTVLEMLT 524
+G P +DI+S G +LE++T
Sbjct: 199 --RGEITPKSDIYSFGVVLLEIIT 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 324 FKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIA 382
+ ++ Y++ + +G G F V G A+K ++D+ + + +++ EI
Sbjct: 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLG-SDLPRIKTEIE 60
Query: 383 LLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLG 441
L H++I Q Y + +K+++ LE G L + + + L + + RQI+
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSA 120
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA---KATKLNDVKSCRGTAFWMAPEV 498
+ Y+H Q HRD+K N+L D +KL DFGL K K +++C G+ + APE+
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 499 INNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
I K+ G AD+WS+G + ++ +P+
Sbjct: 181 IQGKSY-LGSEADVWSMGILLYVLMCGFLPF 210
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFF-FAVKEVSLLDQGSQAKQSISQLEQ----EIALLS 385
++ ++LGRG V I +AVK + + GS + + + +L + E+ +L
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 386 RFE-HENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLK 443
+ H NI+Q T + + ++ +L+ KG L + L ++ L + + R +L +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFG----LAKATKLNDVKSCRGTAFWMAPEVI 499
LH ++VHRD+K NIL+D + ++KL DFG L KL +V C GT ++APE+I
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV--C-GTPSYLAPEII 182
Query: 500 ----NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
N+ + GYG D+WS G + +L P+
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 110/207 (53%), Gaps = 25/207 (12%)
Query: 336 LLGRGSFGSVY----EGISDDGFFFAVK----EVSLLDQGSQAKQSISQLEQEI-ALLSR 386
+LG+GSFG V +G + +A+K +V + D + + +E+ + ALL +
Sbjct: 26 VLGKGSFGKVMLADRKGTEE---LYAIKILKKDVVIQDDDVEC----TMVEKRVLALLDK 78
Query: 387 FEHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYL 445
+ Q + + +LY +E V G L+ ++ Q ++ Q Y +I +GL +L
Sbjct: 79 --PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS---CRGTAFWMAPEVINNK 502
H + +++RD+K N+++D+ G +K+ADFG+ K ++ V + C GT ++APE+I
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC-GTPDYIAPEII--A 193
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ YG D W+ G + EML Q P+
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 29/228 (12%)
Query: 322 GRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQE 380
G+F+ + Y +LLG G++ V +S +G +AVK + QA S S++ +E
Sbjct: 8 GKFEDM--YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-----KQAGHSRSRVFRE 60
Query: 381 IALLSRFE-HENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQI 438
+ L + + ++NI++ +D+++ Y+ E + GS+L ++ ++ H + + S R +
Sbjct: 61 VETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDV 120
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDAN---GSVKLADFGLAKATKLNDVKSCR------- 488
L +LH + + HRD+K NIL ++ VK+ DF L KLN+ SC
Sbjct: 121 AAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNN--SCTPITTPEL 178
Query: 489 ----GTAFWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
G+A +MAPEV+ ++ Y D+WSLG + ML+ P+
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQ--LEQEIALLSRFEHE 390
+LG+GSFG V + I+ G AVK +S Q KQ + L +E+ LL + +H
Sbjct: 33 VLGKGSFGEVILCKDKIT--GQECAVKVIS----KRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NI + Y +D+ Y+ E+ T G L + + R + + RQ+L G+ Y H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 450 VVHRDIKCANILVDA---NGSVKLADFGLA---KATKLNDVKSCRGTAFWMAPEVINNKN 503
+VHRD+K N+L+++ + ++++ DFGL+ +A+K K GTA+++APEV++
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KXKDKIGTAYYIAPEVLHGT- 203
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D+WS G + +L+ P+
Sbjct: 204 --YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 336 LLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
+LG+G +G V++ ++ G FA+K + AK + + + E +L +H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDT-AHTKAERNILEEVKHPF 82
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHL-RDSQVSAYTRQILLGLKYLHDQDV 450
IV + KLY+ LE ++ G L +R + + Y +I + L +LH + +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYG 507
++RD+K NI+++ G VKL DFGL K + ++D + GT +MAPE++ G+
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGTVTHTFCGTIEYMAPEIL--MRSGHN 199
Query: 508 LPADIWSLGCTVLEMLTSQIPYA 530
D WSLG + +MLT P+
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 26 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNK-FS 195
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 26 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNK-FS 195
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 25 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNK-FS 194
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 17 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 132
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K GT ++APEV+ + + YG
Sbjct: 133 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKXFCGTPEYLAPEVLEDND--YGR 189
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPF 210
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 26 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NK-FS 195
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 12 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K GT ++APEV+ + + YG
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKXFCGTPEYLAPEVLEDND--YGR 184
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 22 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY-NK-FS 191
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 23 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NK-FS 192
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 12 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K GT ++APEV+ + + YG
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKXFCGTPEYLAPEVLEDND--YGR 184
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 85
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S G+ F W PEV+ + +D
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 203
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 204 IWAFGVLMWEIYSLGKMPY 222
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 21 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNK-FS 190
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 23 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY-NK-FS 192
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 21 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNK-FS 190
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 334 GDLLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G +G G FG V++GI + A+K S ++ + QE + +F+H
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL----QEALTMRQFDH 450
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHD 447
+IV+ G E+ ++I +EL T G L + Q ++ L + + Y Q+ L YL
Sbjct: 451 PHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGT--AFWMAPEVINNKNK 504
+ VHRDI N+LV A VKL DFGL++ + + K+ +G WMAPE IN +
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR- 568
Query: 505 GYGLPADIWSLGCTVLEML 523
+ +D+W G + E+L
Sbjct: 569 -FTSASDVWMFGVCMWEIL 586
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 69
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 129
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S G+ F W PEV+ + +D
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 187
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 188 IWAFGVLMWEIYSLGKMPY 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 23 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HRD+ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NK-FS 192
Query: 508 LPADIWSLGCTVLEMLTSQI-PY 529
+ +D+W+ G + E+ T + PY
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 336 LLGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LLG+G+FG V E + G ++A+K L + AK ++ E +L H +
Sbjct: 12 LLGKGTFGKVILVREKAT--GRYYAMK--ILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ +L +E G L +L + + + Y +I+ L+YLH +DVV
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGL 508
+RDIK N+++D +G +K+ DFGL K ++D +K GT ++APEV+ + + YG
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKXFCGTPEYLAPEVLEDND--YGR 184
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPF 205
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQA-----KQSISQLEQEI 381
I Y+ + +GRGS+G V AV++ + + + ++ + + + +QEI
Sbjct: 7 INQYYTLENTIGRGSWGEVK---------IAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 57
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++ +H NI++ Y T +D + +Y+ +EL T G L + + R+S + + +L
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLS 117
Query: 441 GLKYLHDQDVVHRDIKCANILV---DANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAP 496
+ Y H +V HRD+K N L + +KL DFGLA K + + GT ++++P
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 177
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
+V+ YG D WS G + +L P++
Sbjct: 178 QVLEGL---YGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 336 LLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
+LG+G +G V++ ++ G FA+K + AK + + + E +L +H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDT-AHTKAERNILEEVKHPF 82
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHL-RDSQVSAYTRQILLGLKYLHDQDV 450
IV + KLY+ LE ++ G L +R + + Y +I + L +LH + +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPEVINNKNKGYGL 508
++RD+K NI+++ G VKL DFGL K + + + GT +MAPE++ G+
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL--MRSGHNR 200
Query: 509 PADIWSLGCTVLEMLTSQIPYA 530
D WSLG + +MLT P+
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFT 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 228 LGGGQYGEVYEGV--------WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +VSA QI ++YL
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HR++ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AY 393
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 394 NK-FSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 34 LGGGQYGEVYEGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 85
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +V+A QI ++YL
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 141 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AY 199
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
NK + + +D+W+ G + E+ T + PY
Sbjct: 200 NK-FSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 65
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 125
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S G+ F W PEV+ + +D
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 183
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 184 IWAFGVLMWEIYSLGKMPY 202
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V QG K +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKN------RELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQA-----KQSISQLEQEI 381
I Y+ + +GRGS+G V AV++ + + + ++ + + + +QEI
Sbjct: 24 INQYYTLENTIGRGSWGEVK---------IAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++ +H NI++ Y T +D + +Y+ +EL T G L + + R+S + + +L
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLS 134
Query: 441 GLKYLHDQDVVHRDIKCANILV---DANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAP 496
+ Y H +V HRD+K N L + +KL DFGLA K + + GT ++++P
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP 194
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
+V+ YG D WS G + +L P++
Sbjct: 195 QVLEGL---YGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 337 LGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAK--QSISQLEQEIALLSRFEHENIV 393
+G+G FG V++G + D A+K + L D + + + + ++E+ ++S H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQD-- 449
+ YG + ++ +E V G L + L + + ++ S I LG++Y+ +Q+
Sbjct: 87 KLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 450 VVHRDIKCANILV---DANGSV--KLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+VHRD++ NI + D N V K+ADFG ++ + ++ V G WMAPE I + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-VHSVSGLLGNFQWMAPETIGAEEE 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
Y AD +S + +LT + P+
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 85
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S G+ F W PEV+ + +D
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK--FSSKSD 203
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 204 IWAFGVLMWEIYSLGKMPY 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 76
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 136
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S G+ F W PEV+ + +D
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 194
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 195 IWAFGVLMWEIYSLGKMPY 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 337 LGRGSFGSVYEG------ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
LG G+FG V+ D AVK +L D A++ +E LL+ +HE
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVK--TLKDASDNARKD---FHREAELLTNLQHE 75
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH---------------LRDSQVSAYT 435
+IV++YG + L + E + G L N + R H L SQ+
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF--- 492
+QI G+ YL Q VHRD+ N LV N VK+ DFG+++ D G
Sbjct: 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 493 -WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WM PE I + + +D+WSLG + E+ T
Sbjct: 195 RWMPPESIMYRK--FTTESDVWSLGVVLWEIFT 225
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G FG V G + A+K ++ +GS ++ + +E ++ HE +VQ Y
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLY 70
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + ++I E + G LLN + R+ + Q+ + + ++YL + +HRD
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 130
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV+ G VK++DFGL++ ++ S G+ F W PEV+ + +D
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 188
Query: 512 IWSLGCTVLEMLT-SQIPY 529
IW+ G + E+ + ++PY
Sbjct: 189 IWAFGVLMWEIYSLGKMPY 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V QG K +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKN------RELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 337 LGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAK--QSISQLEQEIALLSRFEHENIV 393
+G+G FG V++G + D A+K + L D + + + + ++E+ ++S H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQD-- 449
+ YG + ++ +E V G L + L + + ++ S I LG++Y+ +Q+
Sbjct: 87 KLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 450 VVHRDIKCANILV---DANGSV--KLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
+VHRD++ NI + D N V K+ADF L++ + ++ V G WMAPE I + +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-VHSVSGLLGNFQWMAPETIGAEEE 203
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
Y AD +S + +LT + P+
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V QG K +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL---QGKAFKN------RELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS------QLEQEIALLSRFEH 389
+ GS+G+V G+ +G A+K V + +S ++ +EI LL+ F H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 390 ENI-----VQYYGTDKDESKLYIFLELVTKGSLLNLY-QRYHLRDSQVSAYTRQILLGLK 443
NI + + + KLY+ EL+ ++ QR + + + ILLGL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWM-APEVINNK 502
LH+ VVHRD+ NIL+ N + + DF LA+ + K+ T W APE++ +
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELV-MQ 207
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
KG+ D+WS GC + EM +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS------QLEQEIALLSRFEH 389
+ GS+G+V G+ +G A+K V + +S ++ +EI LL+ F H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 390 ENI-----VQYYGTDKDESKLYIFLELVTKGSLLNLY-QRYHLRDSQVSAYTRQILLGLK 443
NI + + + KLY+ EL+ ++ QR + + + ILLGL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWM-APEVINNK 502
LH+ VVHRD+ NIL+ N + + DF LA+ + K+ T W APE++ +
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELV-MQ 207
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
KG+ D+WS GC + EM +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 112/204 (54%), Gaps = 15/204 (7%)
Query: 333 KGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
K ++LG G FG V++ + G A K + +G + K+ +++ EI+++++ +H N
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKE---EVKNEISVMNQLDHAN 147
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
++Q Y + ++ + + +E V G L + + + Y+L + + +QI G++++H
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 450 VVHRDIKCANILV---DANGSVKLADFGLAKATKLND-VKSCRGTAFWMAPEVINNKNKG 505
++H D+K NIL DA +K+ DFGLA+ K + +K GT ++APEV+N
Sbjct: 208 ILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVS 266
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
+ P D+WS+G +L+ P+
Sbjct: 267 F--PTDMWSVGVIAYMLLSGLSPF 288
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LG+G FG V + G +A K++ + ++++ E++I L + +V
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI--LEKVNSRFVVS 248
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHL-----RDSQVSAYTRQILLGLKYLHDQD 449
+ + L + L L+ G L + YH+ +++ Y +I GL+ LH +
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 450 VVHRDIKCANILVDANGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVINNKNKGYGL 508
+V+RD+K NIL+D +G ++++D GLA + +K GT +MAPEV+ KN+ Y
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV--KNERYTF 364
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W+LGC + EM+ Q P+
Sbjct: 365 SPDWWALGCLLYEMIAGQSPF 385
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LG+G FG V + G +A K++ + ++++ E++I L + +V
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQI--LEKVNSRFVVS 248
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHL-----RDSQVSAYTRQILLGLKYLHDQD 449
+ + L + L L+ G L + YH+ +++ Y +I GL+ LH +
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 450 VVHRDIKCANILVDANGSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVINNKNKGYGL 508
+V+RD+K NIL+D +G ++++D GLA + +K GT +MAPEV+ KN+ Y
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV--KNERYTF 364
Query: 509 PADIWSLGCTVLEMLTSQIPY 529
D W+LGC + EM+ Q P+
Sbjct: 365 SPDWWALGCLLYEMIAGQSPF 385
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 267 LGGGQYGEVYEGV--------WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDV 450
Q G E YI E +T G+LL+ + R + + QI ++YL ++
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
+HR++ N LV N VK+ADFGL++ + + G F W APE + NK +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNK-FS 436
Query: 508 LPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
+ +D+W+ G + E+ T + P +S ++
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 468
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FGSV +G+ + +L QG++ K ++ +E ++ + ++ IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + E+ L + +E+ G L +R + S V+ Q+ +G+KYL +++ VHRD
Sbjct: 77 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-----WMAPEVINNKNKGYGLP 509
+ N+L+ K++DFGL+KA +D +A W APE IN + +
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--FSSR 193
Query: 510 ADIWSLGCTVLEMLT-SQIPYAPME 533
+D+WS G T+ E L+ Q PY M+
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 263
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 264 NGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 312
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++GRG+FG V + + FA+K ++ + +A+ + + E+++ L + + I
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV--LVNGDSKWITT 138
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ +D++ LY+ ++ G LL L ++ L + Y ++++ + +H VH
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 453 RDIKCANILVDANGSVKLADFG-LAKATKLNDVKS--CRGTAFWMAPEVINNKNKG---Y 506
RDIK NIL+D NG ++LADFG K + V+S GT +++PE++ G Y
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 507 GLPADIWSLGCTVLEMLTSQIPY 529
G D WSLG + EML + P+
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPF 281
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKNTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
++ G LG+G FG+VY F +V L + + QL +EI + + H
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKV-LFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-GLKYLHDQD 449
NI++ Y D ++Y+ LE +G L Q+ D Q +A + L L Y H +
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLP 509
V+HRDIK N+L+ G +K+ADFG + K+ GT ++ PE+I + + +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMI--EGRMHNEK 201
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D+W +G E+L P+
Sbjct: 202 VDLWCIGVLCYELLVGNPPF 221
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDXXKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 336 LLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGS--QAKQSISQLEQEIALLSRFEHENI 392
++G+GSFG V + F+AVK +L + + + K+ + + LL +H +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVK---VLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVV 451
V + + + KLY L+ + G L QR + + Y +I L YLH ++V
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIV 161
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPEVINNKNKGYGLP 509
+RD+K NIL+D+ G + L DFGL K ++ + GT ++APEV++ + Y
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH--KQPYDRT 219
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D W LG + EML P+
Sbjct: 220 VDWWCLGAVLYEMLYGLPPF 239
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 12/161 (7%)
Query: 379 QEIALLSRF-EHENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYT 435
+EI +L R+ +H NI+ D +Y+ EL G LL+ L Q++ + + SA
Sbjct: 64 EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-FSEREASAVL 122
Query: 436 RQILLGLKYLHDQDVVHRDIKCANIL-VDANG---SVKLADFGLAKATKLND--VKSCRG 489
I ++YLH Q VVHRD+K +NIL VD +G S+++ DFG AK + + + +
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 490 TAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
TA ++APEV+ + +GY DIWSLG + LT P+A
Sbjct: 183 TANFVAPEVL--ERQGYDAACDIWSLGVLLYTXLTGYTPFA 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 95/216 (43%), Gaps = 36/216 (16%)
Query: 337 LGRGSFGSVYEG------ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
LG G+FG V+ + D AVK +L D A++ ++E LL+ +HE
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVK--ALKDPTLAARKD---FQREAELLTNLQHE 77
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD------------------SQVS 432
+IV++YG D L + E + G L N + R H D SQ+
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 433 AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF 492
QI G+ YL Q VHRD+ N LV AN VK+ DFG+++ D G
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 493 ----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WM PE I + + +D+WS G + E+ T
Sbjct: 197 LPIRWMPPESIMYRK--FTTESDVWSFGVILWEIFT 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VYEG+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 225 LGGGQYGEVYEGV--------WKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 276
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD---SQVSA-----YTRQILLGLKYL 445
Q G E YI E +T G+LL+ +LR+ +V+A QI ++YL
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLD-----YLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HR++ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AY 390
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
NK + + +D+W+ G + E+ T + P +S ++
Sbjct: 391 NK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 426
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 111
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 231
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 232 TD-YTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 113
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 233
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 234 TD-YTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 111
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 231
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 232 TD-YTSSIDVWSAGCVLAELLLGQ 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 336 LLGRGSFGSVY----EGISDDGFFFAVK----EVSLLDQGSQAKQSISQLEQEIALLSRF 387
+LG+GSFG V +G + +AVK +V + D + + +E+ + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDE---LYAVKILKKDVVIQDDDVEC----TMVEKRVLALPG- 399
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH 446
+ + Q + + +LY +E V G L+ ++ Q ++ Y +I +GL +L
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--KSCRGTAFWMAPEVINNKNK 504
+ +++RD+K N+++D+ G +K+ADFG+ K + V K GT ++APE+I +
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII--AYQ 517
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
YG D W+ G + EML Q P+
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 115
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 235
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 236 TD-YTSSIDVWSAGCVLAELLLGQ 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 84
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 205 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 156
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 276
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 277 TD-YTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 105
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 225
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 226 TD-YTSSIDVWSAGCVLAELLLGQ 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 19/206 (9%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEV-SLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+GRG++GSV + + G AVK + S +D+ Q KQ + L+ ++ + IVQ
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ-KQLLMDLD---VVMRSSDCPYIVQ 85
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQR-YHLRDSQV-----SAYTRQILLGLKYLHDQ 448
+YG E +I +EL++ S Y+ Y + D + T + L +L +
Sbjct: 86 FYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 449 -DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR--GTAFWMAPEVIN--NKN 503
++HRDIK +NIL+D +G++KL DFG++ ++ + R G +MAPE I+
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS-GQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
+GY + +D+WSLG T+ E+ T + PY
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 91
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 211
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 212 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 239
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FGSV +G+ + +L QG++ K ++ +E ++ + ++ IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G + E+ L + +E+ G L +R + S V+ Q+ +G+KYL +++ VHR+
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-----WMAPEVINNKNKGYGLP 509
+ N+L+ K++DFGL+KA +D +A W APE IN + +
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--FSSR 519
Query: 510 ADIWSLGCTVLEMLT-SQIPYAPME 533
+D+WS G T+ E L+ Q PY M+
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 80
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 200
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 201 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGISDDGFF-FAVKEVSLLDQGSQAKQSISQLEQEIALL 384
R +Q + LG+G+F V + +A K ++ ++ Q +LE+E +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARIC 84
Query: 385 SRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLK 443
+H NIV+ + + +E Y+ +LVT G L ++ R + ++ S QIL +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 444 YLHDQDVVHRDIKCANILVDAN---GSVKLADFGLAKATKLNDVK--SCRGTAFWMAPEV 498
++H D+VHRD+K N+L+ + +VKLADFGLA + GT +++PEV
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 499 INNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ + YG P DIW+ G + +L P+
Sbjct: 205 L--RKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 77
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 197
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 198 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 14/162 (8%)
Query: 379 QEIALLSRF-EHENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYT 435
+EI +L R+ +H NI+ D +Y+ EL+ G LL+ L Q++ + + S
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-FSEREASFVL 127
Query: 436 RQILLGLKYLHDQDVVHRDIKCANIL-VDANGS---VKLADFGLAKATKLND---VKSCR 488
I ++YLH Q VVHRD+K +NIL VD +G+ +++ DFG AK + + + C
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 489 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
TA ++APEV+ K +GY DIWSLG + ML P+A
Sbjct: 188 -TANFVAPEVL--KRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 85
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 205
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 206 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H NIV+
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDHCNIVR 89
Query: 395 --YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLGLKY 444
Y+ E K ++L LV +Y+ R++ R Q V Y Q+ L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 445 LHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPEVINNK 502
+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE+I
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQ 526
Y D+WS GC + E+L Q
Sbjct: 210 TD-YTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 209
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 210 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 258
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 204
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 205 NGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 253
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 72
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 193 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 76
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 196
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 197 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G++GSV D V L + Q+ + +E+ LL +HEN++
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 397 G------TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
+ +D S++Y+ L+ L N+ + L D V Q+L GLKY+H +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+HRD+K +N+ V+ + +++ DFGLA+ ++ T ++ APE++ N Y
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQAD-EEMTGYVATRWYRAPEIMLNWMH-YNQTV 210
Query: 511 DIWSLGCTVLEML 523
DIWS+GC + E+L
Sbjct: 211 DIWSVGCIMAELL 223
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 336 LLGRGSFGSVY----EGISDDGFFFAVK----EVSLLDQGSQAKQSISQLEQEIALLSRF 387
+LG+GSFG V +G + +AVK +V + D + + +E+ + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDE---LYAVKILKKDVVIQDDDVEC----TMVEKRVLALPG- 78
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH 446
+ + Q + + +LY +E V G L+ ++ Q ++ Y +I +GL +L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--KSCRGTAFWMAPEVINNKNK 504
+ +++RD+K N+++D+ G +K+ADFG+ K + V K GT ++APE+I +
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII--AYQ 196
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
YG D W+ G + EML Q P+
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+ ++G GSFG VY+ + D G A+K+V L D+ + +E+ ++ + +H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFK--------NRELQIMRKLDH 73
Query: 390 ENIVQ--YYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQIL 439
NIV+ Y+ E K ++L LV +Y+ R++ R Q V Y Q+
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVK-SCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D + +V KL DFG AK + S + ++ APE
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 193
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+I Y D+WS GC + E+L Q
Sbjct: 194 LIFGATD-YTSSIDVWSAGCVLAELLLGQ 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 206
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 207 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 255
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 14/162 (8%)
Query: 379 QEIALLSRF-EHENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYT 435
+EI +L R+ +H NI+ D +Y+ EL+ G LL+ L Q++ + + S
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-FSEREASFVL 127
Query: 436 RQILLGLKYLHDQDVVHRDIKCANIL-VDANGS---VKLADFGLAKATKLND---VKSCR 488
I ++YLH Q VVHRD+K +NIL VD +G+ +++ DFG AK + + + C
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 489 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
TA ++APEV+ K +GY DIWSLG + ML P+A
Sbjct: 188 -TANFVAPEVL--KRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G+G+F V + G +A K ++ ++ Q +LE+E + +H NIV+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ---KLEREARICRLLKHSNIVRL 68
Query: 396 YGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
+ + +E Y+ +LVT G L ++ R + ++ S +QIL + + H VVHRD
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRD 128
Query: 455 IKCANILVDAN---GSVKLADFGLAKATKLNDVK--SCRGTAFWMAPEVINNKNKGYGLP 509
+K N+L+ + +VKLADFGLA + + GT +++PEV+ + + YG P
Sbjct: 129 LKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL--RKEAYGKP 186
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
DIW+ G + +L P+
Sbjct: 187 VDIWACGVILYILLVGYPPF 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ +E +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +++ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 124
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 242
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 330 YWQK---GDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQ------ 379
++QK D++GRG V + G FAVK + + + + S QLE+
Sbjct: 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV----TAERLSPEQLEEVREATR 147
Query: 380 -EIALLSRFE-HENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTR 436
E +L + H +I+ + + S +++ +L+ KG L + L ++ L + + + R
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR 207
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG----LAKATKLNDVKSCRGTAF 492
+L + +LH ++VHRD+K NIL+D N ++L+DFG L KL ++ C GT
Sbjct: 208 SLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL--C-GTPG 264
Query: 493 WMAPEVI----NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APE++ + + GYG D+W+ G + +L P+
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 41/221 (18%)
Query: 336 LLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LG+G+FG V + + D ++A+K++ ++ +S + E+ LL+ H+ +V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR------HTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 395 YYGT-------------DKDESKLYIFLELVTKGSLLNLYQRYHL---RDSQVSAYTRQI 438
YY K +S L+I E +L +L +L RD + RQI
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-RQI 125
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT-------KL---------N 482
L L Y+H Q ++HR++K NI +D + +VK+ DFGLAK KL +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 483 DVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
++ S GTA ++A EV++ Y D +SLG E +
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGH-YNEKIDXYSLGIIFFEXI 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 377 LEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYT 435
+E EIA+L + +H NIV + LY+ ++LV+ G L + + ++ + S
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 436 RQILLGLKYLHDQDVVHRDIKCANIL---VDANGSVKLADFGLAKATKLNDVKSCR-GTA 491
Q+L +KYLHD +VHRD+K N+L +D + + ++DFGL+K V S GT
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTP 182
Query: 492 FWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APEV+ K Y D WS+G +L P+
Sbjct: 183 GYVAPEVLAQKP--YSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 12/206 (5%)
Query: 337 LGRGSFGSVYEGISDDG----FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG V+ + + +K+ +L+ + ++ EIA+LSR EH NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLY---QRYHLRDSQVSAYT-RQILLGLKYLHDQ 448
++ D E++ + L + GS L+L+ R+ D +++Y RQ++ + YL +
Sbjct: 92 IKV--LDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-KSCRGTAFWMAPEVINNKNKGYG 507
D++HRDIK NI++ + ++KL DFG A + + + GT + APEV+ N G
Sbjct: 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG-NPYRG 208
Query: 508 LPADIWSLGCTVLEMLTSQIPYAPME 533
++WSLG T+ ++ + P+ +E
Sbjct: 209 PELEMWSLGVTLYTLVFEENPFCELE 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 337 LGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LGRGSFG V+ + D GF AVK+V L + ++E+ +A + IV
Sbjct: 80 LGRGSFGEVHR-MKDKQTGFQCAVKKVRL---------EVFRVEELVAC-AGLSSPRIVP 128
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
YG ++ + IF+EL+ GSL L ++ L + + Y Q L GL+YLH + ++H
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 454 DIKCANILVDANGS-VKLADFGLAKATKLNDVKSCR-------GTAFWMAPEVINNKNKG 505
D+K N+L+ ++GS L DFG A + + + GT MAPEV+ K
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-- 246
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
DIWS C +L ML P+
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LG G G V+ + +D A+K++ L D QS+ +EI ++ R +H+NIV+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKV 73
Query: 396 Y--------------GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLG 441
+ G+ + + +YI E + + L N+ ++ L + + Q+L G
Sbjct: 74 FEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEHARLFMYQLLRG 132
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVKSCRG-------TAFW 493
LKY+H +V+HRD+K AN+ ++ V K+ DFGLA+ ++ S +G T ++
Sbjct: 133 LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI--MDPHYSHKGHLSEGLVTKWY 190
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
+P ++ + N Y D+W+ GC EMLT + +A
Sbjct: 191 RSPRLLLSPNN-YTKAIDMWAAGCIFAEMLTGKTLFA 226
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI----SQLEQEIALLSRFEHE 390
D+LG G+F V +++D + L+ AK+++ +E EIA+L + +H
Sbjct: 24 DVLGTGAFSEVI--LAEDK-----RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NIV + LY+ ++LV+ G L + + ++ + S Q+L +KYLHD
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 450 VVHRDIKCANIL---VDANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAPEVINNKNKG 505
+VHRD+K N+L +D + + ++DFGL+K V S GT ++APEV+ K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL--AQKP 194
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
Y D WS+G +L P+
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS----QLEQEIALLSRFEHE 390
D+LG G+F V +++D + L+ AK+++ +E EIA+L + +H
Sbjct: 24 DVLGTGAFSEVI--LAEDK-----RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NIV + LY+ ++LV+ G L + + ++ + S Q+L +KYLHD
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 450 VVHRDIKCANIL---VDANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAPEVINNKNKG 505
+VHRD+K N+L +D + + ++DFGL+K V S GT ++APEV+ K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL--AQKP 194
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
Y D WS+G +L P+
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSI----SQLEQEIALLSRFEHE 390
D+LG G+F V +++D + L+ AK+++ +E EIA+L + +H
Sbjct: 24 DVLGTGAFSEVI--LAEDK-----RTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHP 76
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQD 449
NIV + LY+ ++LV+ G L + + ++ + S Q+L +KYLHD
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 450 VVHRDIKCANIL---VDANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAPEVINNKNKG 505
+VHRD+K N+L +D + + ++DFGL+K V S GT ++APEV+ K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-- 194
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
Y D WS+G +L P+
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 33/211 (15%)
Query: 335 DLLGRGSFGSVYEGISD-DGFFFAVKEV-SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
+ +G G++G V G A+K++ + D + AK+++ +E+ +L F+H+NI
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKHFKHDNI 116
Query: 393 VQY---------YGTDKDESKLYIFLELVTKGSLLNLYQRYH----LRDSQVSAYTRQIL 439
+ YG K +Y+ L+L+ +L+Q H L V + Q+L
Sbjct: 117 IAIKDILRPTVPYGEFK---SVYVVLDLMES----DLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFW 493
GLKY+H V+HRD+K +N+LV+ N +K+ DFG+A+ A + T ++
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 229
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
APE++ + ++ Y D+WS+GC EML
Sbjct: 230 RAPELMLSLHE-YTQAIDLWSVGCIFGEMLA 259
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
W D+LG+G+ +V+ G G FA+K + + S + Q+ +E +L + H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQM-REFEVLKKLNH 66
Query: 390 ENIVQYYGTDKDESKLY--IFLELVTKGSLLNLYQR----YHLRDSQVSAYTRQILLGLK 443
+NIV+ + +++ + + + +E GSL + + Y L +S+ R ++ G+
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 444 YLHDQDVVHRDIKCANIL----VDANGSVKLADFGLAKATKLND-VKSCRGTAFWMAPEV 498
+L + +VHR+IK NI+ D KL DFG A+ + ++ S GT ++ P++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 499 I------NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPME 533
+ K YG D+WS+G T T +P+ P E
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 33/211 (15%)
Query: 335 DLLGRGSFGSVYEGISD-DGFFFAVKEV-SLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
+ +G G++G V G A+K++ + D + AK+++ +E+ +L F+H+NI
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKHFKHDNI 115
Query: 393 VQY---------YGTDKDESKLYIFLELVTKGSLLNLYQRYH----LRDSQVSAYTRQIL 439
+ YG K +Y+ L+L+ +L+Q H L V + Q+L
Sbjct: 116 IAIKDILRPTVPYGEFK---SVYVVLDLMES----DLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFW 493
GLKY+H V+HRD+K +N+LV+ N +K+ DFG+A+ A + T ++
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
APE++ + ++ Y D+WS+GC EML
Sbjct: 229 RAPELMLSLHE-YTQAIDLWSVGCIFGEMLA 258
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G++GSV D V L + Q+ + +E+ LL +HEN++
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 397 G------TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
+ +D S++Y+ L+ L N+ + L D V Q+L GLKY+H +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+HRD+K +N+ V+ + +++ DFGLA+ ++ T ++ APE++ N Y
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLARQAD-EEMTGYVATRWYRAPEIMLNWMH-YNQTV 210
Query: 511 DIWSLGCTVLEML 523
DIWS+GC + E+L
Sbjct: 211 DIWSVGCIMAELL 223
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSA 433
+Q+ +E+ +L IV +YG + ++ I +E + GSL L + + + +
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK 118
Query: 434 YTRQILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF 492
+ +L GL YL ++ ++HRD+K +NILV++ G +KL DFG++ + S GT
Sbjct: 119 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMEC--VSAIFIKTVA 544
+MAPE + + Y + +DIWS+G +++E+ + P P + + AIF + V
Sbjct: 179 YMAPERLQGTH--YSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVV 230
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV--- 393
+G G++G+V + DG A + L + Q++ + +E+ LL HEN++
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 394 QYYGTDK---DESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
+ D+ D + Y+ + + L L + L + ++ Q+L GL+Y+H +
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+HRD+K N+ V+ + +K+ DFGLA+ +++ T ++ APEVI N + Y
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLARQAD-SEMXGXVVTRWYRAPEVILNWMR-YTQTV 207
Query: 511 DIWSLGCTVLEMLTSQ 526
DIWS+GC + EM+T +
Sbjct: 208 DIWSVGCIMAEMITGK 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 62
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 180
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 337 LGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+GRGSFG V+ + D GF AVK+V L + ++E+ +A + IV
Sbjct: 66 VGRGSFGEVHR-MKDKQTGFQCAVKKVRL---------EVFRVEELVAC-AGLSSPRIVP 114
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
YG ++ + IF+EL+ GSL L ++ L + + Y Q L GL+YLH + ++H
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 454 DIKCANILVDANGS-VKLADFGLAKATKLNDVKSCR-------GTAFWMAPEVINNKNKG 505
D+K N+L+ ++GS L DFG A + + + GT MAPEV+ K
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-- 232
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
DIWS C +L ML P+
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 329 TYWQKGDL-LGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLS 385
+W L LGRGSFG V+ + D GF AVK+V L + + E E+ +
Sbjct: 92 VHWATHQLRLGRGSFGEVHR-MEDKQTGFQCAVKKVRL---------EVFRAE-ELMACA 140
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKY 444
IV YG ++ + IF+EL+ GSL L + L + + Y Q L GL+Y
Sbjct: 141 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 445 LHDQDVVHRDIKCANILVDANGS-VKLADFGLAKATKLNDVKSC-------RGTAFWMAP 496
LH + ++H D+K N+L+ ++GS L DFG A + + + GT MAP
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
EV+ ++ + D+WS C +L ML P+
Sbjct: 261 EVVLGRSCDAKV--DVWSSCCMMLHMLNGCHPW 291
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 62
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 180
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 337 LGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G+ G V++ G AVK++ + K+ + L+ +L + IVQ
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD---VVLKSHDCPYIVQC 89
Query: 396 YGTDKDESKLYIFLELV-TKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQD-VVHR 453
+GT + ++I +EL+ T L + + + + T I+ L YL ++ V+HR
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 454 DIKCANILVDANGSVKLADFGLAKATKLNDVKS---CRGTAFWMAPEVINNKN---KGYG 507
D+K +NIL+D G +KL DFG+ + +L D K+ G A +MAPE I+ + Y
Sbjct: 150 DVKPSNILLDERGQIKLCDFGI--SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 508 LPADIWSLGCTVLEMLTSQIPY 529
+ AD+WSLG +++E+ T Q PY
Sbjct: 208 IRADVWSLGISLVELATGQFPY 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 115/221 (52%), Gaps = 34/221 (15%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
KR +++ +L+G G FG V++ DG + +K V K + + E+E+
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV---------KYNNEKAEREVKA 57
Query: 384 LSRFEHENIVQYYG-----------TDKDESK-----LYIFLELVTKGSLLN-LYQRYHL 426
L++ +H NIV Y G + K+ S+ L+I +E KG+L + +R
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 427 RDSQVSAYT--RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV 484
+ +V A QI G+ Y+H + +++RD+K +NI + VK+ DFGL + K ND
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-NDG 176
Query: 485 KSCR--GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
K R GT +M+PE I++++ YG D+++LG + E+L
Sbjct: 177 KRXRSKGTLRYMSPEQISSQD--YGKEVDLYALGLILAELL 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 62
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 180
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 337 LGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+GRGSFG V+ + D GF AVK+V L + ++E+ +A + IV
Sbjct: 82 VGRGSFGEVHR-MKDKQTGFQCAVKKVRL---------EVFRVEELVAC-AGLSSPRIVP 130
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHR 453
YG ++ + IF+EL+ GSL L ++ L + + Y Q L GL+YLH + ++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 454 DIKCANILVDANGS-VKLADFGLAKATKLNDVKSCR-------GTAFWMAPEVINNKNKG 505
D+K N+L+ ++GS L DFG A + + + GT MAPEV+ K
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-- 248
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
DIWS C +L ML P+
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G++GSV D V L + Q+ + +E+ LL +HEN++
Sbjct: 28 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 397 G------TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV 450
+ +D S++Y+ L+ L N+ + L D V Q+L GLKY+H +
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPA 510
+HRD+K +N+ V+ + +++ DFGLA+ ++ T ++ APE++ N Y
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLARQAD-EEMTGYVATRWYRAPEIMLNWMH-YNQTV 202
Query: 511 DIWSLGCTVLEML 523
DIWS+GC + E+L
Sbjct: 203 DIWSVGCIMAELL 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ + +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 15/213 (7%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 65
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ GT +M+PE + + Y
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTH--Y 183
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
+ +DIWS+G +++EM + P PM AIF
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYPRPPM----AIF 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 89
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 150 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 207
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL--KTRTFS 192
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 329 TYWQKGDL-LGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLS 385
+W L LGRGSFG V+ + D GF AVK+V L + + E E+ +
Sbjct: 73 VHWATHQLRLGRGSFGEVHR-MEDKQTGFQCAVKKVRL---------EVFRAE-ELMACA 121
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKY 444
IV YG ++ + IF+EL+ GSL L + L + + Y Q L GL+Y
Sbjct: 122 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 445 LHDQDVVHRDIKCANILVDANGS-VKLADFGLAKATKLNDVKS-------CRGTAFWMAP 496
LH + ++H D+K N+L+ ++GS L DFG A + + + GT MAP
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
EV+ ++ D+WS C +L ML P+
Sbjct: 242 EVVLGRS--CDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSL--LDQGSQAKQSISQLEQEIALLSRFEHENI 392
+++GRG+FG V + + K+V++ ++ S+ K I +L Q LSR H NI
Sbjct: 15 EVVGRGAFGVVCKAK------WRAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNI 64
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRY----HLRDSQVSAYTRQILLGLKYLHDQ 448
V+ YG + + + +E GSL N+ + + ++ Q G+ YLH
Sbjct: 65 VKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 449 D---VVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K N+L+ A G+V K+ DFG A + + + +G+A WMAPEV N
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-KGSAAWMAPEVFEGSN- 180
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
Y D++S G + E++T + P+
Sbjct: 181 -YSEKCDVFSWGIILWEVITRRKPF 204
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
++K +G GS+G V++ + D G A+K+ L + + I+ +EI +L + +H
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIAL--REIRMLKQLKH 61
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSL--LNLYQRYHLRDSQVSAYTRQILLGLKYLHD 447
N+V + + +L++ E L L+ YQR + + V + T Q L + + H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHK 120
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCR-GTAFWMAPEVINNKNKG 505
+ +HRD+K NIL+ + +KL DFG A+ T +D T ++ +PE++ +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ- 179
Query: 506 YGLPADIWSLGCTVLEMLTSQIPYAP 531
YG P D+W++GC E+L S +P P
Sbjct: 180 YGPPVDVWAIGCVFAELL-SGVPLWP 204
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL--KTRTFS 202
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTRTFS 196
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPW 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTRTFS 202
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 203 HASDTWMFGVTLWEMFTYGQEPW 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 33/218 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-ELDHERMSYLLYQ 134
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M PE
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMEPE 185
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
V+ + GY DIWS+GC + EM+ +I
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI 223
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LLG+G+FG V G ++A+K L + AK ++ E +L H +
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMK--ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 395 YYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH-DQDVVH 452
+ + +L +E G L +L + + + Y +I+ L YLH +++VV+
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 275
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N+++D +G +K+ DFGL K + D +K+ GT ++APEV+ + + YG
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKTFCGTPEYLAPEVLEDND--YGRA 332
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 333 VDWWGLGVVMYEMMCGRLPF 352
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENIV 393
LG G +G VY G+ K+ SL K+ ++E+ E A++ +H N+V
Sbjct: 40 LGGGQYGEVYVGVW--------KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL--------GLKYL 445
Q G E YI E + G+LL+ +LR+ T +LL ++YL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLD-----YLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNK 502
++ +HRD+ N LV N VK+ADFGL++ + + G F W APE +
Sbjct: 147 EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQI-PY 529
+ + +D+W+ G + E+ T + PY
Sbjct: 207 T--FSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 62
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 180
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 62
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 180
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAP 531
+ +DIWS+G +++EM + P P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSL--LDQGSQAKQSISQLEQEIALLSRFEHENI 392
+++GRG+FG V + + K+V++ ++ S+ K I +L Q LSR H NI
Sbjct: 14 EVVGRGAFGVVCKAK------WRAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNI 63
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRY----HLRDSQVSAYTRQILLGLKYLHDQ 448
V+ YG + + + +E GSL N+ + + ++ Q G+ YLH
Sbjct: 64 VKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 449 D---VVHRDIKCANILVDANGSV-KLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNK 504
++HRD+K N+L+ A G+V K+ DFG A + + + +G+A WMAPEV N
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-KGSAAWMAPEVFEGSN- 179
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
Y D++S G + E++T + P+
Sbjct: 180 -YSEKCDVFSWGIILWEVITRRKPF 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LLG+G+FG V G ++A+K L + AK ++ E +L H +
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMK--ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 395 YYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH-DQDVVH 452
+ + +L +E G L +L + + + Y +I+ L YLH +++VV+
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N+++D +G +K+ DFGL K + D +K+ GT ++APEV+ + + YG
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKTFCGTPEYLAPEVLEDND--YGRA 329
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 330 VDWWGLGVVMYEMMCGRLPF 349
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V GI D AV + + ++ +S L E+ ++ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSL-----------------LNLYQRYHLRDSQV 431
H+NI+ G + LY+ + +KG+L +N + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
+ T Q+ G++YL Q +HRD+ N+LV N +K+ADFGLA+ +N++ + T
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTT 217
Query: 492 F------WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 218 NGRLPVKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTRTFS 192
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---------GTSFMMTPYVV 187
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---------GTSFMMTPYVV 187
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTRTFS 196
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 197 HASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG GSFG V G D G +V L +++ +E+ + +H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
YG + + EL GSLL+ +++ H +S Y Q+ G+ YL + +H
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF-WMAPEVINNKNKGYG 507
RD+ N+L+ VK+ DFGL +A ND ++ R F W APE + K + +
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL--KTRTFS 192
Query: 508 LPADIWSLGCTVLEMLT-SQIPY 529
+D W G T+ EM T Q P+
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 28/224 (12%)
Query: 331 WQKGDLLGRGSFGSVYEG-ISDDGFFFAVK---EVSLLDQGSQAKQSISQLEQEIALLSR 386
W D+LG+G+ +V+ G G FA+K +S L + + +E +L +
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-------RPVDVQMREFEVLKK 63
Query: 387 FEHENIVQYYGTDKDESKLY--IFLELVTKGSLLNLYQR----YHLRDSQVSAYTRQILL 440
H+NIV+ + +++ + + + +E GSL + + Y L +S+ R ++
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 441 GLKYLHDQDVVHRDIKCANIL----VDANGSVKLADFGLAKATKLND-VKSCRGTAFWMA 495
G+ +L + +VHR+IK NI+ D KL DFG A+ + ++ GT ++
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLH 183
Query: 496 PEVI------NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPME 533
P++ + K YG D+WS+G T T +P+ P E
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+G G++GSV I G A+K++S + Q++ + +E+ LL +HEN++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS---RPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 396 YGTDKDESKLYIFLE--LVTKGSLLNLYQRYHLRDSQ--VSAYTRQILLGLKYLHDQDVV 451
S L F + LV +L + L+ S+ + Q+L GLKY+H VV
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPAD 511
HRD+K N+ V+ + +K+ DFGLA+ ++ T ++ APEVI + Y D
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHAD-AEMTGYVVTRWYRAPEVILSWMH-YNQTVD 206
Query: 512 IWSLGCTVLEMLTSQ 526
IWS+GC + EMLT +
Sbjct: 207 IWSVGCIMAEMLTGK 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 12/206 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q + LG+G+F V + G +A K ++ ++ Q +LE+E + +H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
NIV+ + + +E Y+ +LVT G L ++ R + ++ S +QIL + + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 449 DVVHRDIKCANILVDAN---GSVKLADFGLAKATKLNDVK--SCRGTAFWMAPEVINNKN 503
+VHRD+K N+L+ + +VKLADFGLA + + GT +++PEV+ +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL--RK 180
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
YG P D+W+ G + +L P+
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 33/214 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM-ELDHERMSYLLYQ 134
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M PE
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPE 185
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEML 523
V+ + GY DIWS+GC + EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
+ +Q + LG+G+F V + G +A K ++ ++ Q +LE+E +
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLL 78
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH 446
+H NIV+ + + +E Y+ +LVT G L ++ R + ++ S +QIL + + H
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 447 DQDVVHRDIKCANILVDA---NGSVKLADFGLAKATKLNDVK--SCRGTAFWMAPEVINN 501
VVHRD+K N+L+ + +VKLADFGLA + GT +++PEV+
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL-- 196
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ YG P D+W+ G + +L P+
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 327 IITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLS 385
++ +Q+ +G G+ G V G AVK++S + Q + + +E+ LL
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS---RPFQNQTHAKRAYRELVLLK 78
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQRYH--LRDSQVSAYTRQILLG 441
H+NI+ + L F ++ L+ NL Q H L ++S Q+L G
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG 138
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAPEVIN 500
+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ N + + T ++ APEVI
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI- 197
Query: 501 NKNKGYGLPADIWSLGCTVLEML 523
GY DIWS+GC + E++
Sbjct: 198 -LGMGYAANVDIWSVGCIMGELV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 33/220 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYG------TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ T ++ +Y+ +EL+ +L + Q L ++S Q
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM-ELDHERMSYLLYQ 134
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---------GTSFMMTPY 185
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEMLTSQIPY 529
V+ + GY DIWS+GC + EM+ +I +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 331 WQKGDLLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSI-SQLEQEIALLSRFE 388
++K LG G+ G V++ G A K + L + K +I +Q+ +E+ +L
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----EIKPAIRNQIIRELQVLHECN 81
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV-SAYTRQILLGLKYLHD 447
IV +YG + ++ I +E + GSL + ++ Q+ + ++ GL YL +
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 448 QD-VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNKNKGY 506
+ ++HRD+K +NILV++ G +KL DFG++ + S GT +M+PE + + Y
Sbjct: 142 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--Y 199
Query: 507 GLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
+ +DIWS+G +++EM + P AIF
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 33/218 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-ELDHERMSYLLYQ 134
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M PE
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMEPE 185
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
V+ + GY D+WS+GC + EM+ +I
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---------GTSFMMTPYVV 187
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 69
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 129
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---------GTSFMMTPYVV 180
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 327 IITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLS 385
++ +Q+ +G G+ G V G AVK++S + Q + + +E+ LL
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS---RPFQNQTHAKRAYRELVLLK 76
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQRYH--LRDSQVSAYTRQILLG 441
H+NI+ + L F ++ L+ NL Q H L ++S Q+L G
Sbjct: 77 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG 136
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR-GTAFWMAPEVIN 500
+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ N + + T ++ APEVI
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI- 195
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
GY DIWS+GC + E++ + +
Sbjct: 196 -LGMGYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 12/206 (5%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q + LG+G+F V + G +A K ++ ++ Q +LE+E + +H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKH 62
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
NIV+ + + +E Y+ +LVT G L ++ R + ++ S +QIL + + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 449 DVVHRDIKCANILVDAN---GSVKLADFGLAKATKLNDVK--SCRGTAFWMAPEVINNKN 503
+VHRD+K N+L+ + +VKLADFGLA + + GT +++PEV+ +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL--RK 180
Query: 504 KGYGLPADIWSLGCTVLEMLTSQIPY 529
YG P D+W+ G + +L P+
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 32/236 (13%)
Query: 332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---- 387
Q G LG G+FG V E + F KE ++L + +S + +++ AL+S
Sbjct: 41 QFGKTLGAGAFGKVVEATA----FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 388 ---EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQR-------------YHLRDSQV 431
+HENIV G + + E G LLN +R LRD +
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD--L 154
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
++ Q+ G+ +L ++ +HRD+ N+L+ K+ DFGLA+ + +G A
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 492 F----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTV 543
WMAPE I + Y + +D+WS G + E+ + + P V++ F K V
Sbjct: 215 RLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LLG+G+FG V G ++A+K L + AK ++ E +L H +
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMK--ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 395 YYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH-DQDVVH 452
+ + +L +E G L +L + + + Y +I+ L YLH +++VV+
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N+++D +G +K+ DFGL K + D +K GT ++APEV+ + + YG
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKXFCGTPEYLAPEVLEDND--YGRA 191
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 192 VDWWGLGVVMYEMMCGRLPF 211
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++LGRG FG VY+G DG AVK L ++ Q + Q + E+ ++S H N+++
Sbjct: 44 NILGRGGFGKVYKGRLADGTLVAVK--RLKEERXQGGEL--QFQTEVEMISMAVHRNLLR 99
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-----GLKYLHDQ- 448
G ++ + + GS+ + + + RQ + GL YLHD
Sbjct: 100 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 159
Query: 449 --DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK---SCRGTAFWMAPEVINNKN 503
++HRD+K ANIL+D + DFGLAK D + RGT +APE ++
Sbjct: 160 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK 219
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
D++ G +LE++T Q
Sbjct: 220 SSE--KTDVFGYGVMLLELITGQ 240
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LLG+G+FG V G ++A+K L + AK ++ E +L H +
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMK--ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 395 YYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH-DQDVVH 452
+ + +L +E G L +L + + + Y +I+ L YLH +++VV+
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N+++D +G +K+ DFGL K + D +K GT ++APEV+ + + YG
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKXFCGTPEYLAPEVLEDND--YGRA 190
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 336 LLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G F A+K L G KQ L E +++ +F+H N
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKT---LKSGYTEKQRRDFL-SEASIMGQFDHPN 95
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQD 449
++ G + + I E + GSL + ++ Q+ R I G+KYL D +
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-------WMAPEVINNK 502
VHRD+ NILV++N K++DFGL++ + + +A W APE I +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--Q 213
Query: 503 NKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ + +D+WS G + E+++ + PY M
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LLG+G+FG V G ++A+K L + AK ++ E +L H +
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMK--ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 395 YYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLH-DQDVVH 452
+ + +L +E G L +L + + + Y +I+ L YLH +++VV+
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N+++D +G +K+ DFGL K + D +K GT ++APEV+ + + YG
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKXFCGTPEYLAPEVLEDND--YGRA 189
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
D W LG + EM+ ++P+
Sbjct: 190 VDWWGLGVVMYEMMCGRLPF 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 315 MSNISPNGRFKRII--TYWQ------KGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLD 365
MS I G +K+ + T W+ +G G++GSV I G A+K++S
Sbjct: 20 MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS--- 76
Query: 366 QGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSL----LNLY 421
+ Q++ + +E+ LL +HEN++ S L F + L
Sbjct: 77 RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI 136
Query: 422 QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL 481
+ ++ Q+L GLKY+H VVHRD+K N+ V+ + +K+ DFGLA+
Sbjct: 137 MGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD- 195
Query: 482 NDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
++ T ++ APEVI + Y DIWS+GC + EMLT +
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMH-YNQTVDIWSVGCIMAEMLTGK 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 32/236 (13%)
Query: 332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---- 387
Q G LG G+FG V E + F KE ++L + +S + +++ AL+S
Sbjct: 49 QFGKTLGAGAFGKVVEATA----FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 388 ---EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQR-------------YHLRDSQV 431
+HENIV G + + E G LLN +R LRD +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD--L 162
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
++ Q+ G+ +L ++ +HRD+ N+L+ K+ DFGLA+ + +G A
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 492 F----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTV 543
WMAPE I + Y + +D+WS G + E+ + + P V++ F K V
Sbjct: 223 RLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 276
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 77
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 188
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LGRG++G V E + G AVK + + K+ + L+ + + + V
Sbjct: 59 LGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV---DCPFTVT 114
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQ- 448
+YG E ++I +EL+ SL Y++ + + + I+ L++LH +
Sbjct: 115 FYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC-RGTAFWMAPEVINNK--NKG 505
V+HRD+K +N+L++A G VK+ DFG++ + K+ G +MAPE IN + KG
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKG 233
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
Y + +DIWSLG T++E+ + PY
Sbjct: 234 YSVKSDIWSLGITMIELAILRFPY 257
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 32/238 (13%)
Query: 332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---- 387
Q G LG G+FG V E + F KE ++L + +S + +++ AL+S
Sbjct: 49 QFGKTLGAGAFGKVVEATA----FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 388 ---EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQR----------YHLRDSQVSA- 433
+HENIV G + + E G LLN +R + + +S +S
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 434 ----YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG 489
++ Q+ G+ +L ++ +HRD+ N+L+ K+ DFGLA+ + +G
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 490 TAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTV 543
A WMAPE I + Y + +D+WS G + E+ + + P V++ F K V
Sbjct: 225 NARLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 116/231 (50%), Gaps = 23/231 (9%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS 375
S S +GRF+ + Y + D+LG G+ V I+ +E ++ Q S
Sbjct: 2 STDSFSGRFEDV--YQLQEDVLGEGAHARVQTCIN----LITSQEYAVKIIEKQPGHIRS 55
Query: 376 QLEQEIALLSRFE-HENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSA 433
++ +E+ +L + + H N+++ ++E + Y+ E + GS+L ++++R H + + S
Sbjct: 56 RVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV 115
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLN-------- 482
+ + L +LH++ + HRD+K NIL + VK+ DFGL KLN
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 483 -DVKSCRGTAFWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ + G+A +MAPEV+ + + Y D+WSLG + +L+ P+
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 187
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 114
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 225
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 75
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 135
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 186
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 187 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 70
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 181
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 182 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 77
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 188
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---- 387
Q G LG G+FG V E + F KE ++L + +S + +++ AL+S
Sbjct: 49 QFGKTLGAGAFGKVVEATA----FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 388 ---EHENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVS 432
+HENIV G + + E G LLN Y H + Q+S
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 433 A-----YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC 487
+ ++ Q+ G+ +L ++ +HRD+ N+L+ K+ DFGLA+ +
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 488 RGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTV 543
+G A WMAPE I + Y + +D+WS G + E+ + + P V++ F K V
Sbjct: 225 KGNARLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 282
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 187
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 69
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 129
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 180
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVS--LLDQGSQAKQSISQLEQEIAL 383
R +Q + LG+G+F V + A +E + +++ + + +LE+E +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVK----VLAGQEYAAMIINTKKLSARDHQKLEREARI 63
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGL 442
+H NIV+ + + +E Y+ +LVT G L ++ R + ++ S +QIL +
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 123
Query: 443 KYLHDQDVVHRDIKCANILVDA---NGSVKLADFGLAKATKLNDVK--SCRGTAFWMAPE 497
+ H VVHR++K N+L+ + +VKLADFGLA + GT +++PE
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 183
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
V+ + YG P D+W+ G + +L P+
Sbjct: 184 VL--RKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---- 387
Q G LG G+FG V E + F KE ++L + +S + +++ AL+S
Sbjct: 49 QFGKTLGAGAFGKVVEATA----FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 388 ---EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQR----------YHLRDSQVSA- 433
+HENIV G + + E G LLN +R + + +S S
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR 164
Query: 434 ----YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG 489
++ Q+ G+ +L ++ +HRD+ N+L+ K+ DFGLA+ + +G
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 490 TAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFIKTV 543
A WMAPE I + Y + +D+WS G + E+ + + P V++ F K V
Sbjct: 225 NARLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 70
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL--NLYQ--RYHLRDSQVSAYTRQIL 439
+ H+NI+ + L F ++ L+ NL Q + L ++S Q+L
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P V+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPYVV 181
Query: 500 NNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
+ GY DIWS+GC + EM+ +I
Sbjct: 182 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQ--RYHLRDSQVSAYT 435
+ H+NI+ + L YI +EL+ NL Q + L ++S
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLSQVIQMELDHERMSYLL 132
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
Q+L+G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---------GTSFMMT 183
Query: 496 PEVINNKNK--------GYGLPADIWSLGCTVLEML 523
P V+ + GY DIWS+GC + EM+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 323 RFKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
+ ++ ++ + LG G+FG V+ G FA K V + + + +EI
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-----ETVRKEI 205
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA--YTRQIL 439
+S H +V + +D++++ + E ++ G L H + S+ A Y RQ+
Sbjct: 206 QTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 265
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGS--VKLADFGL-AKATKLNDVKSCRGTAFWMAP 496
GL ++H+ + VH D+K NI+ S +KL DFGL A VK GTA + AP
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
EV K GY D+WS+G +L+ P+
Sbjct: 326 EVAEGKPVGYY--TDMWSVGVLSYILLSGLSPFG 357
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 20/219 (9%)
Query: 328 ITYWQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
++Y + +++G G FG V G + G + + L G +Q + E +++ +
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQ 73
Query: 387 FEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-----AYTRQILLG 441
FEH NI++ G + + I E + G+L + + L D Q + R I G
Sbjct: 74 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASG 130
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-------WM 494
++YL + VHRD+ NILV++N K++DFGL++ + N ++ W
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
APE I + + +D WS G + E+++ + PY M
Sbjct: 191 APEAIAFRK--FTSASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 334 GDLLGRGSFGSVYEG-ISDDGFFFAVKEV-SLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
G+ +GRG+FG V+ G + D AVK L +AK QE +L ++ H N
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPN 173
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQD 449
IV+ G + +YI +ELV G L + LR + G++YL +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG-----TAFWMAPEVINNKNK 504
+HRD+ N LV +K++DFG+++ + + V + G W APE +N
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGR- 291
Query: 505 GYGLPADIWSLGCTVLEMLT 524
Y +D+WS G + E +
Sbjct: 292 -YSSESDVWSFGILLWETFS 310
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-SDDGFFFAVK-EVSLLDQGSQAK 371
S +PN RI+ T ++ +LG G+FG+VY+GI +G + + +L++ + K
Sbjct: 23 SGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK 82
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDS 429
++ +++ + +++ +H ++V+ G + + + +L+ G LL + ++
Sbjct: 83 ANVEFMDEAL-IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 430 QVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT----KLNDVK 485
+ + QI G+ YL ++ +VHRD+ N+LV + VK+ DFGLA+ K +
Sbjct: 141 LLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 486 SCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
+ WMA E I+ + + +D+WS G T+ E++T
Sbjct: 201 GGKMPIKWMALECIHYRK--FTHQSDVWSYGVTIWELMT 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 33/218 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ + D A+K++S + Q + + +E+ L
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLS---RPFQNQTHAKRAYRELVL 114
Query: 384 LSRFEHENIVQYYG------TDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ T ++ +Y+ +EL+ +L + Q L ++S Q
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQM-ELDHERMSYLLYQ 172
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPY 223
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
V+ + GY DIWS+GC + EM+ +I
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 110/207 (53%), Gaps = 22/207 (10%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LGRG FG V+ + G +A K+++ + + +E++I L++ IV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI--LAKVHSRFIVS 249
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHL----------RDSQVSAYTRQILLGLKY 444
+ ++ L + + ++ G + RYH+ ++ + YT QI+ GL++
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDI-----RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS--CRGTAFWMAPEVINNK 502
LH +++++RD+K N+L+D +G+V+++D GLA K K+ GT +MAPE++ +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D ++LG T+ EM+ ++ P+
Sbjct: 365 E--YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 47/234 (20%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
KR +++ +L+G G FG V++ DG + ++ V K + + E+E+
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV---------KYNNEKAEREVKA 58
Query: 384 LSRFEHENIVQYYGT--------------------DKDESK---------LYIFLELVTK 414
L++ +H NIV Y G D + SK L+I +E K
Sbjct: 59 LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 415 GSLLN-LYQRYHLRDSQVSAYT--RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLA 471
G+L + +R + +V A QI G+ Y+H + ++HRD+K +NI + VK+
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 472 DFGLAKATKLNDVKSCR--GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
DFGL + K ND K R GT +M+PE I++++ YG D+++LG + E+L
Sbjct: 179 DFGLVTSLK-NDGKRTRSKGTLRYMSPEQISSQD--YGKEVDLYALGLILAELL 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 110/207 (53%), Gaps = 22/207 (10%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LGRG FG V+ + G +A K+++ + + +E++I L++ IV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI--LAKVHSRFIVS 249
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHL----------RDSQVSAYTRQILLGLKY 444
+ ++ L + + ++ G + RYH+ ++ + YT QI+ GL++
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDI-----RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS--CRGTAFWMAPEVINNK 502
LH +++++RD+K N+L+D +G+V+++D GLA K K+ GT +MAPE++ +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D ++LG T+ EM+ ++ P+
Sbjct: 365 E--YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 110/207 (53%), Gaps = 22/207 (10%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LGRG FG V+ + G +A K+++ + + +E++I L++ IV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI--LAKVHSRFIVS 249
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHL----------RDSQVSAYTRQILLGLKY 444
+ ++ L + + ++ G + RYH+ ++ + YT QI+ GL++
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDI-----RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS--CRGTAFWMAPEVINNK 502
LH +++++RD+K N+L+D +G+V+++D GLA K K+ GT +MAPE++ +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D ++LG T+ EM+ ++ P+
Sbjct: 365 E--YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 361 VSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN- 419
V +++G + +++ ++EI H NIV++ + L I +E + G L
Sbjct: 49 VKYIERGEKIDENV---KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 420 LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS--VKLADFGLAK 477
+ + + + +Q++ G+ Y H V HRD+K N L+D + + +K+ADFG +K
Sbjct: 106 ICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
Query: 478 ATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
A+ L+ KS GT ++APEV+ K G AD+WS G T+ ML P+
Sbjct: 166 ASVLHSQPKSAVGTPAYIAPEVLLKKEYD-GKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 110/207 (53%), Gaps = 22/207 (10%)
Query: 336 LLGRGSFGSVYE-GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
+LGRG FG V+ + G +A K+++ + + +E++I L++ IV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI--LAKVHSRFIVS 249
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHL----------RDSQVSAYTRQILLGLKY 444
+ ++ L + + ++ G + RYH+ ++ + YT QI+ GL++
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDI-----RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS--CRGTAFWMAPEVINNK 502
LH +++++RD+K N+L+D +G+V+++D GLA K K+ GT +MAPE++ +
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
Y D ++LG T+ EM+ ++ P+
Sbjct: 365 E--YDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 198 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 244
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 323 RFKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
+ ++ ++ + LG G+FG V+ G FA K V + + + +EI
Sbjct: 45 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-----ETVRKEI 99
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA--YTRQIL 439
+S H +V + +D++++ + E ++ G L H + S+ A Y RQ+
Sbjct: 100 QTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 159
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGS--VKLADFGL-AKATKLNDVKSCRGTAFWMAP 496
GL ++H+ + VH D+K NI+ S +KL DFGL A VK GTA + AP
Sbjct: 160 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 219
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
EV K GY D+WS+G +L+ P+
Sbjct: 220 EVAEGKPVGYY--TDMWSVGVLSYILLSGLSPFG 251
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 334 GDLLGRGSFGSVYEG-ISDDGFFFAVKEV-SLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
G+ +GRG+FG V+ G + D AVK L +AK QE +L ++ H N
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPN 173
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQD 449
IV+ G + +YI +ELV G L + LR + G++YL +
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG-----TAFWMAPEVINNKNK 504
+HRD+ N LV +K++DFG+++ + + V + G W APE +N
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGR- 291
Query: 505 GYGLPADIWSLGCTVLEMLT 524
Y +D+WS G + E +
Sbjct: 292 -YSSESDVWSFGILLWETFS 310
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 337 LGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LGRG++G V E + G AVK + + K+ + L+ + + V
Sbjct: 15 LGRGAYG-VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVT 70
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQ- 448
+YG E ++I +EL+ SL Y++ + + + I+ L++LH +
Sbjct: 71 FYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS--CRGTAFWMAPEVINNK--NK 504
V+HRD+K +N+L++A G VK+ DFG++ ++DV G +MAPE IN + K
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 505 GYGLPADIWSLGCTVLEMLTSQIPY 529
GY + +DIWSLG T++E+ + PY
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPY 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 205 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 251
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 206 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 252
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 202 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 248
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENI 392
+LG G FG VYEG+ + +++++ + + ++ E+ E ++ +H +I
Sbjct: 31 ILGEGFFGEVYEGVYTN---HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDV 450
V+ G ++E +I +EL G L + +R L+ + Y+ QI + YL +
Sbjct: 88 VKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
VHRDI NILV + VKL DFGL++ + D T WM+PE IN + +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR--FT 204
Query: 508 LPADIWSLGCTVLEMLT 524
+D+W + E+L+
Sbjct: 205 TASDVWMFAVCMWEILS 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 437 GICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 495
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 496 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 553
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 554 DVWSFGVLMWEAFSYGQKPYRGMK 577
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++LGRG FG VY+G DG AVK L ++ +Q + Q + E+ ++S H N+++
Sbjct: 36 NILGRGGFGKVYKGRLADGXLVAVK--RLKEERTQGGEL--QFQTEVEMISMAVHRNLLR 91
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-----GLKYLHDQ- 448
G ++ + + GS+ + + + RQ + GL YLHD
Sbjct: 92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151
Query: 449 --DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK---SCRGTAFWMAPEVINNKN 503
++HRD+K ANIL+D + DFGLAK D + RG +APE ++
Sbjct: 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK 211
Query: 504 KGYGLPADIWSLGCTVLEMLTSQ 526
D++ G +LE++T Q
Sbjct: 212 SSE--KTDVFGYGVMLLELITGQ 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENI 392
+LG G FG VYEG+ + +++++ + + ++ E+ E ++ +H +I
Sbjct: 15 ILGEGFFGEVYEGVYTNH---KGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDV 450
V+ G ++E +I +EL G L + +R L+ + Y+ QI + YL +
Sbjct: 72 VKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
VHRDI NILV + VKL DFGL++ + D T WM+PE IN + +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR--FT 188
Query: 508 LPADIWSLGCTVLEMLT 524
+D+W + E+L+
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQ--RYHLRDSQVSAYT 435
+ H+NI+ + L YI +EL+ NL Q + L ++S
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLSQVIQMELDHERMSYLL 132
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
Q+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---------GTSFMMT 183
Query: 496 PEVINNKNK--------GYGLPADIWSLGCTVLEML 523
P V+ + GY DIWS+GC + EM+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQI 438
EI +L R H NI++ + +++ + LELVT G L + + ++ + + + +QI
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDA---NGSVKLADFGLAKATKLNDV-KSCRGTAFWM 494
L + YLH+ +VHRD+K N+L + +K+ADFGL+K + + K+ GT +
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYC 217
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
APE++ + YG D+WS+G +L P+
Sbjct: 218 APEIL--RGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 496
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 497 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 554
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 555 DVWSFGVLMWEAFSYGQKPYRGMK 578
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQ---EIALLSRFEHENI 392
+LG G FG VYEG+ + +++++ + + ++ E+ E ++ +H +I
Sbjct: 19 ILGEGFFGEVYEGVYTN---HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDV 450
V+ G ++E +I +EL G L + +R L+ + Y+ QI + YL +
Sbjct: 76 VKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 451 VHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYG 507
VHRDI NILV + VKL DFGL++ + D T WM+PE IN + +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR--FT 192
Query: 508 LPADIWSLGCTVLEMLT 524
+D+W + E+L+
Sbjct: 193 TASDVWMFAVCMWEILS 209
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 377 LEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYT 435
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 61 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGTA 491
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 120 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 492 FWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 219
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY------------HLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Q H + Q+S+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 213 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 259
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 377 LEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYT 435
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 68 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGTA 491
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 127 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 492 FWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 20/219 (9%)
Query: 328 ITYWQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR 386
++Y + +++G G FG V G + G + + L G +Q + E +++ +
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQ 71
Query: 387 FEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-----AYTRQILLG 441
FEH NI++ G + + I E + G+L + + L D Q + R I G
Sbjct: 72 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR---LNDGQFTVIQLVGMLRGIASG 128
Query: 442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-------WM 494
++YL + VHRD+ NILV++N K++DFGL++ + N ++ W
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
APE I + + +D WS G + E+++ + PY M
Sbjct: 189 APEAIAFRK--FTSASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 89
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 210 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 377 LEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYT 435
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGTA 491
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 492 FWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G+FG + D + V +++G+ +++ ++EI H NIV++
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYIERGAAIDENV---QREIINHRSLRHPNIVRFK 82
Query: 397 GTDKDESKLYIFLELVTKGSLLNLYQRY----HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
+ L I +E + G LY+R + + + +Q+L G+ Y H + H
Sbjct: 83 EVILTPTHLAIIMEYASGG---ELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 453 RDIKCANILVDANGS--VKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLP 509
RD+K N L+D + + +K+ DFG +K++ L+ KS GT ++APEV+ + G
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD-GKI 198
Query: 510 ADIWSLGCTVLEMLTSQIPY 529
AD+WS G T+ ML P+
Sbjct: 199 ADVWSCGVTLYVMLVGAYPF 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 377 LEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYT 435
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGTA 491
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 492 FWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 377 LEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYT 435
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 62 VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGTA 491
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 492 FWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 31/229 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G LG G+FG V G+ D K + + ++ +S L E+ ++ +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNL------------YQRYHLRDSQVSAY-- 434
H+NI+ G + LY+ +E +KG+L Y H + Q+S+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 435 ---TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC 487
Q+ G++YL + +HRD+ N+LV + +K+ADFGLA+ D +
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 488 RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT---SQIPYAPME 533
R WMAPE + ++ Y +D+WS G + E+ T S P P+E
Sbjct: 254 RLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 300
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 335 DLLGRGSFGSVYEG-ISDDGFFF--AVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
D++G G+FG V + I DG A+K + + +LE L H N
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE---VLCKLGHHPN 87
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQR---------YHLRDSQVSAYTRQILL-- 440
I+ G + LY+ +E G+LL+ ++ + + +S S + Q LL
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 441 ------GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC-RGTAFW 493
G+ YL + +HRD+ NILV N K+ADFGL++ ++ K+ R W
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMEC 534
MA E +N Y +D+WS G + E+++ PY M C
Sbjct: 208 MAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 149
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 150 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 206
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 207 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 30 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 89
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 141
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 142 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 199 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 43 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 102
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 103 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 154
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 155 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 211
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 212 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 33/218 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 81
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM-ELDHERMSYLLYQ 139
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPY 190
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
V+ + GY D+WS+GC + EM+ +I
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 134
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 135 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 191
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 335 DLLGRGSFGSVYEG-ISDDGFFF--AVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
D++G G+FG V + I DG A+K + + +LE L H N
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE---VLCKLGHHPN 77
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQR---------YHLRDSQVSAYTRQILL-- 440
I+ G + LY+ +E G+LL+ ++ + + +S S + Q LL
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 441 ------GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC-RGTAFW 493
G+ YL + +HRD+ NILV N K+ADFGL++ ++ K+ R W
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMEC 534
MA E +N Y +D+WS G + E+++ PY M C
Sbjct: 198 MAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 237
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 122
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 123 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 179
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 180 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 121
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 122 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 178
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 179 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 135
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 136 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 192
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQ--RYHLRDSQVSAYT 435
+ H+NI+ + L YI +EL+ NL Q + L ++S
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLSQVIQMELDHERMSYLL 132
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
Q+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---------GTSFMMT 183
Query: 496 PEVINNKNK--------GYGLPADIWSLGCTVLEML 523
P V+ + GY DIWS+GC + EM+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 149
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+K+L
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 209
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 270 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 135
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 136 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 192
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 151
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 152 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 209
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 210 DVWSFGVLMWEAFSYGQKPYRGMK 233
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 134
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 135 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 191
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 24/224 (10%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 1 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 56
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KD 113
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 114 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 173
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
+ + WMA E I ++ Y +D+WS G TV E++T
Sbjct: 174 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 215
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 134
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 135 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 191
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 122
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 123 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 179
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 180 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 121
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 122 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 178
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 179 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 135
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 136 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 192
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 1 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 56
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGXLLD-YVREH-KD 113
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 114 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 173
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 174 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 231
Query: 538 IFIK 541
I K
Sbjct: 232 ILEK 235
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 24/224 (10%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 4 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 59
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KD 116
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 117 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 176
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
+ + WMA E I ++ Y +D+WS G TV E++T
Sbjct: 177 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 218
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 135
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 136 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 192
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 211
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 212 DVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 211
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 212 DVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 91
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+K+L
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL- 210
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 211 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 58
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D+
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KDNIG 115
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
Query: 541 K 541
K
Sbjct: 234 K 234
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 57
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KD 114
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 175 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
Query: 538 IFIK 541
I K
Sbjct: 233 ILEK 236
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 33/218 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 70
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM-ELDHERMSYLLYQ 128
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPY 179
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEMLTSQI 527
V+ + GY D+WS+GC + EM+ +I
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 134
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 135 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 191
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 456 KCANILVDANGSVKLADFGLAKATKL--NDVKSCRGTAF---WMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + N K+ + W APE IN + +
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK--FSSKS 195
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 196 DVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 95
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS---AYTRQILLGLKYL 445
N++ G + E + L + G L N + R + V + Q+ G+K+L
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVI 499
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 215 --QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGLA+ + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 122
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 123 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 179
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 180 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 122/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 61
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D+
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KDNIG 118
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 119 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
Query: 541 K 541
K
Sbjct: 237 K 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 91
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+K+L
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 210
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 211 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 88
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+K+L
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 148
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 207
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 208 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQ 366
+ ++P + + + +Q G LLG G FGSVY GI D A+K V L
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 367 GSQAKQSISQLEQE-------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLL 418
G++ + L++ I LL FE ++ V + L+ F+
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-------- 149
Query: 419 NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAK 477
+R L++ ++ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG
Sbjct: 150 ---ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 206
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
K GT + PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 207 LLKDTVYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVS---LLDQGSQAKQSISQLEQEIALLSR 386
+Q G LLG G FGSVY GI D A+K V + D G + ++ E+ LL +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT--RVPMEVVLLKK 67
Query: 387 FEHE-----NIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILL 440
++ ++ ++ +S + I + L + + +R L++ ++ Q+L
Sbjct: 68 VSSGFSGVIRLLDWF--ERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 441 GLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVI 499
+++ H+ V+HRDIK NIL+D N G +KL DFG K GT + PE I
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 185
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ +G A +WSLG + +M+ IP+
Sbjct: 186 -RYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 82
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 142
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 203 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 143
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 144 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 201
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 202 DVWSFGVLMWEAFSYGQKPYRGMK 225
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 90
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+K+L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 211 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G FG V+ G + A+K + +G+ +++ + E ++ + H +VQ Y
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 68
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G +++ + + E + G L + QR + + G+ YL + V+HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV N +K++DFG+ + + S GT F W +PEV + Y +D
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--YSSKSD 186
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + +IPY
Sbjct: 187 VWSFGVLMWEVFSEGKIPY 205
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+K+L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGTAF---WMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ + + V + G WMA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 209
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 108
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 168
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 229 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 109
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS---AYTRQILLGLKYL 445
N++ G + E + L + G L N + R + V + Q+ G+KYL
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVI 499
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 229 --QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 195
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 196 DVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 90
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 211 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 33/214 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM-ELDHERMSYLLYQ 134
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPY 185
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEML 523
V+ + GY DIWS+GC + EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 87
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 147
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 208 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 19/240 (7%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQ 372
S +PN RI+ T ++K +LG G+FG+VY+G+ +G + + + + + +
Sbjct: 34 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPK 93
Query: 373 SISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS 432
+ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+ S
Sbjct: 94 ANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIGS 150
Query: 433 AYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLNDV 484
Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 151 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 485 KSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFIK 541
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I K
Sbjct: 211 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 268
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 33/214 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 77
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM-ELDHERMSYLLYQ 135
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPY 186
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEML 523
V+ + GY DIWS+GC + EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
+Q+ LG GS+G V++ S +DG +AVK +G K +L + + +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG--PKDRARKLAEVGSHEKVGQH 116
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHD 447
V+ ++ LY+ EL SL + + L ++QV Y R LL L +LH
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGL------AKATKLNDVKSCRGTAFWMAPEVINN 501
Q +VH D+K ANI + G KL DFGL A A ++ + G +MAPE++
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-----GDPRYMAPELLQG 230
Query: 502 KNKGYGLPADIWSLGCTVLEM 522
YG AD++SLG T+LE+
Sbjct: 231 S---YGTAADVFSLGLTILEV 248
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 376 QLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAY 434
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 435 TRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGT 490
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 491 AFWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 131
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 132 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 189
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 190 DVWSFGVLMWEAFSYGQKPYRGMK 213
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 88
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 148
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 209 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQ--RYHLRDSQVSAYT 435
+ H+NI+ + L YI +EL+ NL Q + L ++S
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLSQVIQMELDHERMSYLL 132
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
Q+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMT 183
Query: 496 PEVINNKNK--------GYGLPADIWSLGCTVLEML 523
P V+ + GY DIWS+GC + EM+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
LG G+FG+V +G V +L + +L E ++ + ++ IV+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
G + ES + + +E+ G L L Q H++D + Q+ +G+KYL + + VHRD+
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133
Query: 456 KCANILVDANGSVKLADFGLAKATKLND-----VKSCRGTAFWMAPEVINNKNKGYGLPA 510
N+L+ K++DFGL+KA + ++ + W APE IN + +
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--FSSKS 191
Query: 511 DIWSLGCTVLEMLT-SQIPYAPME 533
D+WS G + E + Q PY M+
Sbjct: 192 DVWSFGVLMWEAFSYGQKPYRGMK 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 33/214 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQM-ELDHERMSYLLYQ 134
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMTPY 185
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEML 523
V+ + GY DIWS+GC + EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 33/214 (15%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 78
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQ 437
+ H+NI+ + L YI +EL+ +L + Q L ++S Q
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-ELDHERMSYLLYQ 136
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE 497
+L G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M P
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------GTSFMMVPF 187
Query: 498 VINNKNK--------GYGLPADIWSLGCTVLEML 523
V+ + GY DIWS+GC + EM+
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 89
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 210 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 95
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 216 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 115/231 (49%), Gaps = 23/231 (9%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS 375
S S +GRF+ + Y + D+LG G+ V I+ +E ++ Q S
Sbjct: 2 STDSFSGRFEDV--YQLQEDVLGEGAHARVQTCIN----LITSQEYAVKIIEKQPGHIRS 55
Query: 376 QLEQEIALLSRFE-HENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSA 433
++ +E+ +L + + H N+++ ++E + Y+ E + GS+L ++++R H + + S
Sbjct: 56 RVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV 115
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLN-------- 482
+ + L +LH++ + HRD+K NIL + VK+ DF L KLN
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 483 -DVKSCRGTAFWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ + G+A +MAPEV+ + + Y D+WSLG + +L+ P+
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 85
Query: 390 ENIVQYYGTD-KDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLH 446
N++ G + E + L + G L N + ++ + + Q+ G+KYL
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVIN 500
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 501 NKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + +D+WS G + E++T P P
Sbjct: 206 TQK--FTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 317 NISPNGRFKRII-----TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAK 371
+ P G +I T+ Q+ +G G FG V+ G + A+K + +GS ++
Sbjct: 13 GLVPRGSLHMVIDPSELTFVQE---IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSE 66
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDS 429
+ E ++ + H +VQ YG +++ + + E + G L + QR
Sbjct: 67 DDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE 123
Query: 430 QVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG 489
+ + G+ YL + V+HRD+ N LV N +K++DFG+ + + S G
Sbjct: 124 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
Query: 490 TAF---WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
T F W +PEV + Y +D+WS G + E+ + +IPY
Sbjct: 184 TKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSEGKIPY 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 376 QLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAY 434
+E EI +L + H I++ D YI LEL+ G L + + L+++ Y
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 435 TRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKAT-KLNDVKSCRGT 490
Q+LL ++YLH+ ++HRD+K N+L+ + +K+ DFG +K + + +++ GT
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 491 AFWMAPEV-INNKNKGYGLPADIWSLGCTVLEMLTSQIPYA 530
++APEV ++ GY D WSLG + L+ P++
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 359
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 335 DLLGRGSFGSVYEG--ISDDG--FFFAVKEVS-LLDQGSQAKQSISQLEQEIALLSRFEH 389
+++GRG FG VY G + +DG AVK ++ + D G +SQ E ++ F H
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-----VSQFLTEGIIMKDFSH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS---AYTRQILLGLKYL 445
N++ G + E + L + G L N + R + V + Q+ G+KYL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGTAFWMAPEVI 499
+ VHRD+ N ++D +VK+ADFGLA+ +++ + WMA E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
+ + + +D+WS G + E++T P P
Sbjct: 210 --QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 113/216 (52%), Gaps = 14/216 (6%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-SDDGFFFAVK-EVSLLDQGSQAKQSI 374
+PN RI+ T ++ +LG G+FG+VY+GI +G + + +L++ + K ++
Sbjct: 3 APNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVS 432
+++ + +++ +H ++V+ G + + + +L+ G LL + ++ +
Sbjct: 63 EFMDEAL-IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLL 120
Query: 433 AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT----KLNDVKSCR 488
+ QI G+ YL ++ +VHRD+ N+LV + VK+ DFGLA+ K + +
Sbjct: 121 NWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 180
Query: 489 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WMA E I+ + + +D+WS G T+ E++T
Sbjct: 181 MPIKWMALECIHYRK--FTHQSDVWSYGVTIWELMT 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 87
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 148 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 207
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 208 AFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 238
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 96
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 217 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 114
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 115 FFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 174
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 175 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 336 LLGRGSFGSVYEGI----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G F A+K L G KQ L E +++ +F+H N
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKT---LKSGYTEKQRRDFLS-EASIMGQFDHPN 69
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQD 449
++ G + + I E + GSL + ++ Q+ R I G+KYL D +
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-------WMAPEVINNK 502
VHR + NILV++N K++DFGL++ + + +A W APE I +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI--Q 187
Query: 503 NKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ + +D+WS G + E+++ + PY M
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G G FG V G + G + L G KQ L E +++ +F+H NI+
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-SEASIMGQFDHPNIIH 94
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQDVVH 452
G + I E + GSL ++ R + Q+ R I G+KYL D VH
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVH 154
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNKGYG 507
RD+ NILV++N K++DFG+++ + + + RG W APE I + +
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK--FT 212
Query: 508 LPADIWSLGCTVLEMLT-SQIPYAPM 532
+D+WS G + E+++ + PY M
Sbjct: 213 SASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 40 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 95
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF---WMAPEVINNK 502
VHRD+ NIL+++N K++DFGL++ L D + RG W +PE I +
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYR 213
Query: 503 NKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 214 K--FTSASDVWSYGIVLWEVMSYGERPYWEM 242
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 112
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 173 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 232
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 233 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 27/222 (12%)
Query: 323 RFKRIITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
R ++ + +Q + G+G+FG+V G G A+K+V Q + + Q+ Q++
Sbjct: 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI---QDPRFRNRELQIMQDL 73
Query: 382 ALLSRFEHENIVQ---YYGTDKDESKLYIFLELVTK---GSLLNLYQRYHLRDSQ----- 430
A+L H NIVQ Y+ T + + I+L +V + +L + Y+ R
Sbjct: 74 AVL---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130
Query: 431 VSAYTRQIL--LGLKYLHDQDVVHRDIKCANILVD-ANGSVKLADFGLAK---ATKLNDV 484
+ + Q++ +G +L +V HRDIK N+LV+ A+G++KL DFG AK ++ N
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 485 KSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
C + ++ APE+I N+ Y DIWS+GC EM+ +
Sbjct: 191 YIC--SRYYRAPELIFG-NQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G FG V+ G + A+K + +G+ +++ + E ++ + H +VQ Y
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 66
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G +++ + + E + G L + QR + + G+ YL + V+HRD
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV N +K++DFG+ + + S GT F W +PEV + Y +D
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--YSSKSD 184
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + +IPY
Sbjct: 185 VWSFGVLMWEVFSEGKIPY 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 13 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 68
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 69 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 125
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 126 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 186 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 243
Query: 541 K 541
K
Sbjct: 244 K 244
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 23 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 78
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF---WMAPEVINNK 502
VHRD+ NIL+++N K++DFGL++ L D + RG W +PE I +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 503 NKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 197 K--FTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 102
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 163 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 223 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 23 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 78
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF---WMAPEVINNK 502
VHRD+ NIL+++N K++DFGL++ L D + RG W +PE I +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 503 NKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 197 K--FTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 119
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 179
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 180 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G FG V+ G + A+K + +G+ +++ + E ++ + H +VQ Y
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 68
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G +++ + + E + G L + QR + + G+ YL + V+HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV N +K++DFG+ + + S GT F W +PEV + Y +D
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--YSSKSD 186
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + +IPY
Sbjct: 187 VWSFGVLMWEVFSEGKIPY 205
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 57
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 114
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 174
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 175 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
Query: 538 IFIK 541
I K
Sbjct: 233 ILEK 236
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 7 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 62
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 119
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 180 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 538 IFIK 541
I K
Sbjct: 238 ILEK 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 113
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 174 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 234 AFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G FG V+ G + A+K + +G+ +++ + E ++ + H +VQ Y
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 71
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G +++ + + E + G L + QR + + G+ YL + V+HRD
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV N +K++DFG+ + + S GT F W +PEV + Y +D
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--YSSKSD 189
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + +IPY
Sbjct: 190 VWSFGVLMWEVFSEGKIPY 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 58
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGXLLD-YVREH-KDNIG 115
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
Query: 541 K 541
K
Sbjct: 234 K 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 58
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 115
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
Query: 541 K 541
K
Sbjct: 234 K 234
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 96
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 217 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 6 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 61
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 62 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 118
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 119 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 178
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 179 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 236
Query: 538 IFIK 541
I K
Sbjct: 237 ILEK 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 122
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 183 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 243 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 95
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I +EL+ G L + + R SQ S+ R I G +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 216 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 119
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 179
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 180 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 61
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 118
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 119 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
Query: 541 K 541
K
Sbjct: 237 K 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL + + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 58
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 115
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
Query: 541 K 541
K
Sbjct: 234 K 234
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 136
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 197 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 257 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 50 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 105
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 224
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 225 -FTSASDVWSYGIVLWEVMSYGERPYWEM 252
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSL----LDQGSQAKQSISQLEQEIALLSRFEHEN 391
++G G FG V G + KE+S+ L G KQ L E +++ +F+H N
Sbjct: 52 VVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPN 107
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQD 449
I++ G + I E + GSL + +++ + + Q+ R I G+KYL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNK 504
VHRD+ NIL+++N K++DFGL++ + + + RG W +PE I +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 505 GYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
+ +D+WS G + E+++ + PY M
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 61
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 118
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 119 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
Query: 541 K 541
K
Sbjct: 237 K 237
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 335 DLLGRGSFGSVYEG-ISDDGFFF--AVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
D++G G+FG V + I DG A+K + + +LE L H N
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE---VLCKLGHHPN 84
Query: 392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQR---------YHLRDSQVSAYTRQILL-- 440
I+ G + LY+ +E G+LL+ ++ + + +S S + Q LL
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 441 ------GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC-RGTAFW 493
G+ YL + +HR++ NILV N K+ADFGL++ ++ K+ R W
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMEC 534
MA E +N Y +D+WS G + E+++ PY M C
Sbjct: 205 MAIESLN--YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 244
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 6 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 61
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 118
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 119 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
Query: 541 K 541
K
Sbjct: 237 K 237
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 118
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 178
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 179 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 119
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 179
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 180 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 141
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 201
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 202 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 327 IITYWQKGDLLGRGSFGSVYEG------ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE 380
I+ W+ LG G+FG V+ D AVK +L + A+Q ++E
Sbjct: 14 IVLKWE----LGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKEASESARQD---FQRE 64
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS----------- 429
LL+ +H++IV+++G + L + E + G L N + R H D+
Sbjct: 65 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAP 123
Query: 430 ------QVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND 483
Q+ A Q+ G+ YL VHRD+ N LV VK+ DFG+++ D
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 484 VKSCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAI 538
G WM PE I + + +D+WS G + E+ T + P+ + AI
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 241
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 40/240 (16%)
Query: 327 IITYWQKGDLLGRGSFGSVYEG------ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE 380
I+ W+ LG G+FG V+ D AVK +L + A+Q ++E
Sbjct: 20 IVLKWE----LGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKEASESARQD---FQRE 70
Query: 381 IALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS----------- 429
LL+ +H++IV+++G + L + E + G L N + R H D+
Sbjct: 71 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAP 129
Query: 430 ------QVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND 483
Q+ A Q+ G+ YL VHRD+ N LV VK+ DFG+++ D
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 484 VKSCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAI 538
G WM PE I + + +D+WS G + E+ T + P+ + AI
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 247
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYEG------ISDDGFFFAVKEVSLLDQGSQAKQSISQLE 378
+ I+ W+ LG G+FG V+ D AVK +L + A+Q +
Sbjct: 41 RDIVLKWE----LGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKEASESARQD---FQ 91
Query: 379 QEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--------- 429
+E LL+ +H++IV+++G + L + E + G L N + R H D+
Sbjct: 92 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDV 150
Query: 430 --------QVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL 481
Q+ A Q+ G+ YL VHRD+ N LV VK+ DFG+++
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
Query: 482 NDVKSCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVS 536
D G WM PE I + + +D+WS G + E+ T + P+ +
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
Query: 537 AI 538
AI
Sbjct: 269 AI 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G G FG V G + G + L G KQ L E +++ +F+H N+V
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFL-CEASIMGQFDHPNVVH 108
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
G + I +E + G+L +++ Q+ R I G++YL D VH
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF------WMAPEVINNKNKGY 506
RD+ NILV++N K++DFGL++ + +D ++ T W APE I + +
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGGKIPVRWTAPEAIQYRK--F 225
Query: 507 GLPADIWSLGCTVLEMLT-SQIPYAPM 532
+D+WS G + E+++ + PY M
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERPYWDM 252
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G G FG V G + G + L G KQ L E +++ +F+H NI+
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-SEASIMGQFDHPNIIH 79
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQDVVH 452
G + I E + GSL ++ R + Q+ R I G+KYL D VH
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 139
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNKGYG 507
RD+ NILV++N K++DFG+++ + + + RG W APE I + +
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK--FT 197
Query: 508 LPADIWSLGCTVLEMLT-SQIPYAPM 532
+D+WS G + E+++ + PY M
Sbjct: 198 SASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 25 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 80
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 81 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 137
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 138 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 197
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 198 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 255
Query: 538 IFIK 541
I K
Sbjct: 256 ILEK 259
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G G FG V G + G + L G KQ L E +++ +F+H NI+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-SEASIMGQFDHPNIIH 73
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDS--QVSAYTRQILLGLKYLHDQDVVH 452
G + I E + GSL ++ R + Q+ R I G+KYL D VH
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 133
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNKGYG 507
RD+ NILV++N K++DFG+++ + + + RG W APE I + +
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK--FT 191
Query: 508 LPADIWSLGCTVLEMLT-SQIPYAPM 532
+D+WS G + E+++ + PY M
Sbjct: 192 SASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQ--RYHLRDSQVSAYT 435
+ H+NI+ + L YI +EL+ NL Q + L ++S
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLSQVIQMELDHERMSYLL 132
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
Q+L+G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---------GTSFMMT 183
Query: 496 PEVINNKNK--------GYGLPADIWSLGCTVLEML 523
P V+ + GY DIWS+G + EM+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSE--QDELDFLMEALIISKFNHQNI 110
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 231 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 114
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 174
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 175 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 117
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 177
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 178 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 14/220 (6%)
Query: 315 MSNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVK-EVSLLDQGSQA 370
MS +PN RI+ T +K +LG G+FG+VY+GI DG + + +L + +
Sbjct: 1 MSGAAPNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP 60
Query: 371 KQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRD 428
K + ++ E +++ + + G S + + +L+ G LL+ + R L
Sbjct: 61 KAN-KEILDEAYVMAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGS 118
Query: 429 SQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK--- 485
+ + QI G+ YL D +VHRD+ N+LV + VK+ DFGLA+ +++ +
Sbjct: 119 QDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 486 -SCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
+ WMA E I + + +D+WS G TV E++T
Sbjct: 179 DGGKVPIKWMALESILRRR--FTHQSDVWSYGVTVWELMT 216
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+F H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKFNHQNI 110
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I +EL+ G L + + R SQ S+ R I G +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 231 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 327 IITYWQKGDLLGRGSFGSV---YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
++ +Q +G G+ G V Y+ I + A+K++S + Q + + +E+ L
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNV--AIKKLS---RPFQNQTHAKRAYRELVL 76
Query: 384 LSRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQ--RYHLRDSQVSAYT 435
+ H+NI+ + L YI +EL+ NL Q + L ++S
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA----NLSQVIQMELDHERMSYLL 132
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMA 495
Q+L+G+K+LH ++HRD+K +NI+V ++ ++K+ DFGLA+ GT+F M
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---------GTSFMMT 183
Query: 496 PEVINNKNK--------GYGLPADIWSLGCTVLEML 523
P V+ + GY DIWS+G + EM+
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSL--------LDQGSQAKQSISQLEQE- 380
+Q G LLG G FGSVY GI D A+K V L G++ + L++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 381 ------IALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA 433
I LL FE ++ V + L+ F+ +R L++ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-----------ERGALQEELARS 114
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLNDVKSCRGTAF 492
+ Q+L +++ H+ V+HRDIK NIL+D N G +KL DFG K GT
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRV 174
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
+ PE I ++ +G A +WSLG + +M+ IP+
Sbjct: 175 YSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G FG V+ G + A+K + +G+ +++ + E ++ + H +VQ Y
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIE---EAEVMMKLSHPKLVQLY 69
Query: 397 GTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRD 454
G +++ + + E + G L + QR + + G+ YL + V+HRD
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 455 IKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---WMAPEVINNKNKGYGLPAD 511
+ N LV N +K++DFG+ + + S GT F W +PEV + Y +D
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--YSSKSD 187
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + +IPY
Sbjct: 188 VWSFGVLMWEVFSEGKIPY 206
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 35/216 (16%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ- 394
++G GSFG V++ + A+K+V Q + K +E+ ++ +H N+V
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVL---QDKRFKN------RELQIMRIVKHPNVVDL 97
Query: 395 ---YY--GTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQ------VSAYTRQILLG 441
+Y G KDE +FL LV + +Y+ R++ + Q + Y Q+L
Sbjct: 98 KAFFYSNGDKKDE----VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 442 LKYLHDQDVVHRDIKCANILVD-ANGSVKLADFGLAK---ATKLNDVKSCRGTAFWMAPE 497
L Y+H + HRDIK N+L+D +G +KL DFG AK A + N C + ++ APE
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPE 211
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPME 533
+I Y DIWS GC + E++ Q P P E
Sbjct: 212 LIFGAT-NYTTNIDIWSTGCVMAELMQGQ-PLFPGE 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 45/249 (18%)
Query: 332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---- 387
Q G LG G+FG V E + F KE ++L + +S + +++ AL+S
Sbjct: 34 QFGKTLGAGAFGKVVEATA----FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 388 ---EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQR--------------------- 423
+HENIV G + + E G LLN +R
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 424 -----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA 478
LRD + ++ Q+ G+ +L ++ +HRD+ N+L+ K+ DFGLA+
Sbjct: 150 EDGRPLELRD--LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 479 TKLNDVKSCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMEC 534
+ +G A WMAPE I + Y + +D+WS G + E+ + + P
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGIL 265
Query: 535 VSAIFIKTV 543
V++ F K V
Sbjct: 266 VNSKFYKLV 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 57
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KD 114
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFG AK K
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 175 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
Query: 538 IFIK 541
I K
Sbjct: 233 ILEK 236
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G+FG + D + V +++G + +++ ++EI H NIV++
Sbjct: 26 IGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENV---KREIINHRSLRHPNIVRFK 80
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
+ L I +E + G L + + + + +Q++ G+ Y H V HRD+
Sbjct: 81 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 456 KCANILVDANGS--VKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
K N L+D + + +K+ DFG +K++ L+ KS GT ++APEV+ K G AD+
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD-GKVADV 199
Query: 513 WSLGCTVLEMLTSQIPY 529
WS G T+ ML P+
Sbjct: 200 WSCGVTLYVMLVGAYPF 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +L G+FG+VY+G+ A+KE+ + +
Sbjct: 7 SGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 62
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KD 119
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 180 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 538 IFIK 541
I K
Sbjct: 238 ILEK 241
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 57
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KD 114
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFG AK K
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 175 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
Query: 538 IFIK 541
I K
Sbjct: 233 ILEK 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 37/229 (16%)
Query: 326 RIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALL 384
R +T ++ LGRG FG V+E + D +A+K + L ++ A++ + + E+ L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMR---EVKAL 57
Query: 385 SRFEHENIVQYYGT--DKDESK----------LYIFLELVTKGSL---LNLYQRYHLRDS 429
++ EH IV+Y+ +K+ ++ LYI ++L K +L +N R+
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 430 QVSAYT-RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC- 487
V + QI +++LH + ++HRD+K +NI + VK+ DFGL A ++ +
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 488 -------------RGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
GT +M+PE I+ + Y DI+SLG + E+L
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNS--YSHKVDIFSLGLILFELL 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 29/207 (14%)
Query: 335 DLLGRGSFGS-VYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENI 392
D+LG G+ G+ VY G+ D+ AVK + + S ++E+ LL EH N+
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDV-AVKRI--------LPECFSFADREVQLLRESDEHPNV 80
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDV 450
++Y+ T+KD YI +EL + Q+ HL ++ +Q GL +LH ++
Sbjct: 81 IRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITL-LQQTTSGLAHLHSLNI 139
Query: 451 VHRDIKCANILV---DANGSVK--LADFGLAKATKLNDVKSCR-----GTAFWMAPEVIN 500
VHRD+K NIL+ +A+G +K ++DFGL K + R GT W+APE+++
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 501 ---NKNKGYGLPADIWSLGCTVLEMLT 524
+N Y + DI+S GC +++
Sbjct: 200 EDCKENPTYTV--DIFSAGCVFYYVIS 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 113/221 (51%), Gaps = 24/221 (10%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 7 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 62
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + ++L+ G LL+ Y R H +D+
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLD-YVREH-KDNIG 119
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFG AK K
Sbjct: 120 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
+ + WMA E I ++ Y +D+WS G TV E++T
Sbjct: 180 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 218
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 18 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 72
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 73 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 133 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 193 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 5/159 (3%)
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSA 433
+ +++EI H NIV++ + L I +E + G L + + +
Sbjct: 60 ANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGS--VKLADFGLAKATKLN-DVKSCRGT 490
+ +Q++ G+ Y H V HRD+K N L+D + + +K+ DFG +K++ L+ KS GT
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 179
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++APEV+ K G AD+WS G T+ ML P+
Sbjct: 180 PAYIAPEVLLKKEYD-GKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 55/251 (21%)
Query: 320 PNGRFKRIITYWQKGD------LLGRGSFGSVYEGISD-DGFFFAVKEV-----SLLDQG 367
P R + WQ D L+G GS+G V E + A+K++ L+D
Sbjct: 38 PTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID-- 95
Query: 368 SQAKQSISQLEQEIALLSRFEHENIVQYYGT--DKDESK---LYIFLELVTKGSLLNLYQ 422
++ +EIA+L+R H+++V+ KD K LY+ LE+
Sbjct: 96 ------CKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT 149
Query: 423 RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL- 481
+L + + +L+G+KY+H ++HRD+K AN LV+ + SVK+ DFGLA+
Sbjct: 150 PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209
Query: 482 -------------------------NDVKSCRG---TAFWMAPEVINNKNKGYGLPADIW 513
N + G T ++ APE+I + + Y D+W
Sbjct: 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ-ENYTEAIDVW 268
Query: 514 SLGCTVLEMLT 524
S+GC E+L
Sbjct: 269 SIGCIFAELLN 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 27 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 81
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 82 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 202 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 336 LLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++G G FG V G + G + L G KQ L E +++ +F+H NI+
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPNIIH 87
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVH 452
G + I E + GSL ++ Q+ R I G+KYL D VH
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVH 147
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLND--VKSCRGTAF---WMAPEVINNKNKGYG 507
RD+ NIL+++N K++DFGL++ + + + RG W APE I + +
Sbjct: 148 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK--FT 205
Query: 508 LPADIWSLGCTVLEMLT-SQIPY-------------------APMECVSAIF 539
+D+WS G + E+++ + PY +PM+C +A++
Sbjct: 206 SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALY 257
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 41/229 (17%)
Query: 331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEIALLSRFE 388
++ L+GRGS+G VY + A K V++ + I ++ +EI +L+R +
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKN----ANKNVAIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 389 HENIVQYYGTDKDES-----KLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGL 442
+ I++ + E +LYI LE + L L++ L + V +LLG
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 443 KYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK-------LNDVK---------- 485
K++H+ ++HRD+K AN L++ + SVK+ DFGLA+ +ND++
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 486 ----------SCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
S T ++ APE+I + + Y DIWS GC E+L
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQ-ENYTNSIDIWSTGCIFAELLN 252
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+ H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKLNHQNI 96
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 217 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 57
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 114
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFG AK K
Sbjct: 115 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 174
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 175 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
Query: 538 IFIK 541
I K
Sbjct: 233 ILEK 236
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + +
Sbjct: 7 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 62
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 119
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFG AK K
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK 179
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 180 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 538 IFIK 541
I K
Sbjct: 238 ILEK 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 337 LGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
LG G+FG VYEG + +D V +L + S+ Q E ++S+ H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE--QDELDFLMEALIISKLNHQNI 110
Query: 393 VQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAY--------TRQILLGLKY 444
V+ G +I LEL+ G L + + R SQ S+ R I G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 445 LHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCRGTAF----WMAPE 497
L + +HRDI N L+ G K+ DFG+A+ G A WM PE
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 498 VINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+ D WS G + E+ + +PY
Sbjct: 231 AF--MEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 112/221 (50%), Gaps = 24/221 (10%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +L G+FG+VY+G+ A+KE+ + + +
Sbjct: 3 APNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 58
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 115
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
+ + WMA E I ++ Y +D+WS G TV E++T
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMT 214
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 26 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 80
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 141 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 201 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 316 SNISPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGS 368
S +PN RI+ T ++K +L G+FG+VY+G+ A+KE+ + +
Sbjct: 7 SGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REA 62
Query: 369 QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD 428
+ ++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D
Sbjct: 63 TSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KD 119
Query: 429 SQVSAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATK 480
+ S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K
Sbjct: 120 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 179
Query: 481 LNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSA 537
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+
Sbjct: 180 EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
Query: 538 IFIK 541
I K
Sbjct: 238 ILEK 241
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 27/241 (11%)
Query: 319 SPNGRFKRII--TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAK 371
+PN RI+ T ++K +LG G+FG+VY+G+ A+KE+ + + +
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSP 58
Query: 372 QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV 431
++ ++ E +++ ++ ++ + G S + + +L+ G LL+ Y R H +D+
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIG 115
Query: 432 SAYTR----QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLND 483
S Y QI G+ YL D+ +VHRD+ N+LV VK+ DFG AK K
Sbjct: 116 SQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175
Query: 484 VKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY--APMECVSAIFI 540
+ + WMA E I ++ Y +D+WS G TV E++T PY P +S+I
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
Query: 541 K 541
K
Sbjct: 234 K 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 33 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 87
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 208 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 24 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 78
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 79 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 138
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 139 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 199 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 232
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 20 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 74
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 75 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 135 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 195 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V G G AVK + D +QA E +++++ H N+VQ
Sbjct: 201 IGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQA------FLAEASVMTQLRHSNLVQLL 252
Query: 397 GTDKDE-SKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
G +E LYI E + KGSL++ + R L + ++ + ++YL + VH
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 453 RDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPAD 511
RD+ N+LV + K++DFGL K A+ D + + W APE + + K + +D
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKWTAPEAL--REKKFSTKSD 368
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + ++PY
Sbjct: 369 VWSFGILLWEIYSFGRVPY 387
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V G G AVK + D +QA E +++++ H N+VQ
Sbjct: 14 IGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQA------FLAEASVMTQLRHSNLVQLL 65
Query: 397 GTDKDE-SKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
G +E LYI E + KGSL++ + R L + ++ + ++YL + VH
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 453 RDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPAD 511
RD+ N+LV + K++DFGL K A+ D + + W APE + + K + +D
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKWTAPEAL--REKKFSTKSD 181
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + ++PY
Sbjct: 182 VWSFGILLWEIYSFGRVPY 200
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 26 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 80
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 141 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 201 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V G G AVK + D +QA E +++++ H N+VQ
Sbjct: 29 IGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQA------FLAEASVMTQLRHSNLVQLL 80
Query: 397 GTDKDE-SKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
G +E LYI E + KGSL++ + R L + ++ + ++YL + VH
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 453 RDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPAD 511
RD+ N+LV + K++DFGL K A+ D + + W APE + + K + +D
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKWTAPEAL--REKKFSTKSD 196
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + ++PY
Sbjct: 197 VWSFGILLWEIYSFGRVPY 215
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 27 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 81
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 82 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 202 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 55 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 109
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 110 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G WM
Sbjct: 170 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 229
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 230 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 263
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 334 GDLLGRGSFGSVYEG--ISDDGFFFAVKEVSL-LDQGSQAKQSISQLEQEIALLSRFEHE 390
G +LG G FGSV EG +DG V ++ LD SQ + I + E A + F H
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ--REIEEFLSEAACMKDFSHP 96
Query: 391 NIVQYYGTDKDES-----KLYIFLELVTKGSLLN--LYQRY-----HLRDSQVSAYTRQI 438
N+++ G + S K + L + G L LY R H+ + + I
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV----KSCRGTAFWM 494
LG++YL +++ +HRD+ N ++ + +V +ADFGL+K D + + W+
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
A E + ++ Y +D+W+ G T+ E+ T PY
Sbjct: 217 AIESL--ADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
T +K +LG G FG+V++G+ +G + + + +QS + + +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 388 EHENIVQYYGTDKDESKLYIFLELVTK----GSLLNLYQRYH---LRDSQVSAYTRQILL 440
+H +IV+ G S L+LVT+ GSLL+ + R H L + + QI
Sbjct: 91 DHAHIVRLLGLCPGSS-----LQLVTQYLPLGSLLD-HVRQHRGALGPQLLLNWGVQIAK 144
Query: 441 GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA----FWMAP 496
G+ YL + +VHR++ N+L+ + V++ADFG+A +D + A WMA
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 497 EVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYA 530
E I+ Y +D+WS G TV E++T PYA
Sbjct: 205 ESIHFGK--YTHQSDVWSYGVTVWELMTFGAEPYA 237
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 336 LLGRGSFGSV-YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
++GRG+F V + G +A+K ++ D + + +S +E +L + I Q
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGE--VSCFREERDVLVNGDRRWITQ 125
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA--YTRQILLGLKYLHDQDVVH 452
+ +DE+ LY+ +E G LL L ++ R A Y +I++ + +H VH
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 453 RDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR-----GTAFWMAPEVIN----NKN 503
RDIK NIL+D G ++LADFG KL + R GT +++PE++
Sbjct: 186 RDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG 243
Query: 504 KGYGLP-ADIWSLGCTVLEMLTSQIPY 529
G P D W+LG EM Q P+
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 329 TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
T ++K +LG G+FG+VY+G+ A+KE+ + + + ++ ++ E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSPKANKEILDEAYV 64
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----QIL 439
++ ++ ++ + G S + + +L+ G LL+ Y R H +D+ S Y QI
Sbjct: 65 MASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIGSQYLLNWCVQIA 121
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLNDVKSCRGTAFWMA 495
G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K + + WMA
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLT 524
E I ++ Y +D+WS G TV E++T
Sbjct: 182 LESILHRI--YTHQSDVWSYGVTVWELMT 208
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 33 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 87
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD----------------SQVSA 433
++V+ G + +EL+T+G L + +LR S++
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDL-----KSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF- 492
+I G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 493 ---WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
WM+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 203 PVRWMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Query: 334 GDLLGRGSFGSVYEGI--SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN 391
G +LG+G FGSV E +DG F V V +L A I + +E A + F+H +
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVA-VKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 392 IVQYYGTD---KDESKL---YIFLELVTKGSL--LNLYQR-----YHLRDSQVSAYTRQI 438
+ + G + + +L + L + G L L R ++L + + I
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--KSC--RGTAFWM 494
G++YL ++ +HRD+ N ++ + +V +ADFGL++ D + C + W+
Sbjct: 147 ACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPME 533
A E + + Y + +D+W+ G T+ E++T Q PYA +E
Sbjct: 207 ALESL--ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 334 GDLLGRGSFGSVYEGIS-DDGFFFAVKEVS---LLDQGSQAKQSISQLEQEIALLSRFE- 388
G LLG+G FG+V+ G D A+K + +L + LE +ALL +
Sbjct: 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE--VALLWKVGA 93
Query: 389 ---HENIVQYYGTDKDESKLYIFLE--LVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLK 443
H +++ + + + LE L + + ++ L + + Q++ ++
Sbjct: 94 GGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 444 YLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINNK 502
+ H + VVHRDIK NIL+D G KL DFG GT + PE I ++
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI-SR 212
Query: 503 NKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ + LPA +WSLG + +M+ IP+
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-E 388
G +LG G+FG V GIS G V V +L + + + + L E+ ++++
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVA-VKMLKEKADSSER-EALMSELKMMTQLGS 107
Query: 389 HENIVQYYGTDKDESKLYIFLELVTKGSLLNLY--QRYHLRDSQVS-------------- 432
HENIV G +Y+ E G LLN +R + ++
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 433 --------AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV 484
+ Q+ G+++L + VHRD+ N+LV VK+ DFGLA+ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 485 KSCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIFI 540
RG A WMAPE + Y + +D+WS G + E+ + + P V A F
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGI--YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY 285
Query: 541 KTV 543
K +
Sbjct: 286 KLI 288
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 316 SNISPNGRFKRIITYWQKGDLLGRGSFGSVYEG-ISDDGFFFAVKEVSLLDQGSQAKQSI 374
S + P G + + ++ RG FG V++ + +D F AVK L D+ S
Sbjct: 9 SGLVPRGSLQLL-------EIKARGRFGCVWKAQLMND--FVAVKIFPLQDKQSW----- 54
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQ 430
Q E+EI +HEN++Q+ +K S L + L L+T KGSL + + + ++
Sbjct: 55 -QSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNE 113
Query: 431 VSAYTRQILLGLKYLHDQ-----------DVVHRDIKCANILVDANGSVKLADFGLA--- 476
+ + GL YLH+ + HRD K N+L+ ++ + LADFGLA
Sbjct: 114 LCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF 173
Query: 477 -KATKLNDVKSCRGTAFWMAPEVIN---NKNKGYGLPADIWSLGCTVLEMLT 524
D GT +MAPEV+ N + L D++++G + E+++
Sbjct: 174 EPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 41/227 (18%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSIS--QLEQEIALLSRFEHENIV 393
L+GRGS+G VY + K V++ + I ++ +EI +L+R + + I+
Sbjct: 33 LIGRGSYGYVYLAYDKN----TEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 88
Query: 394 QYYGTDKDES-----KLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHD 447
+ Y + +LYI LE + L L++ L + + +LLG ++H+
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 448 QDVVHRDIKCANILVDANGSVKLADFGLAKATK-------LNDVK--------------- 485
++HRD+K AN L++ + SVK+ DFGLA+ +ND++
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 486 --SCRGTAFWMAPEVINNKNKGYGLPADIWSLGCT---VLEMLTSQI 527
S T ++ APE+I + + Y DIWS GC +L ML S I
Sbjct: 208 LTSHVVTRWYRAPELILLQ-ENYTKSIDIWSTGCIFAELLNMLQSHI 253
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 23 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 77
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRD----------------SQVSA 433
++V+ G + +EL+T+G L + +LR S++
Sbjct: 78 HHVVRLLGVVSQGQPTLVIMELMTRGDL-----KSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF- 492
+I G+ YL+ VHRD+ N +V + +VK+ DFG+ + D G
Sbjct: 133 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 493 ---WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
WM+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 193 PVRWMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTR 436
E +++ +F+H NI++ G I E + GSL + + R H Q+ R
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLR 158
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---- 492
+ G++YL D VHRD+ N+LVD+N K++DFGL++ + +D + T
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAXTTTGGKIP 217
Query: 493 --WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
W APE I + + +D+WS G + E+L + PY M
Sbjct: 218 IRWTAPEAIAFRT--FSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 329 TYWQKGDLLGRGSFGSVYEGI-----SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL 383
T ++K +LG G+FG+VY+G+ A+KE+ + + + ++ ++ E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL----REATSPKANKEILDEAYV 67
Query: 384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----QIL 439
++ ++ ++ + G S + + +L+ G LL+ Y R H +D+ S Y QI
Sbjct: 68 MASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLD-YVREH-KDNIGSQYLLNWCVQIA 124
Query: 440 LGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK----ATKLNDVKSCRGTAFWMA 495
G+ YL D+ +VHRD+ N+LV VK+ DFGLAK K + + WMA
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 496 PEVINNKNKGYGLPADIWSLGCTVLEMLT 524
E I ++ Y +D+WS G TV E++T
Sbjct: 185 LESILHRI--YTHQSDVWSYGVTVWELMT 211
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G+FG + D + V +++G + +++ ++EI H NIV++
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENV---KREIINHRSLRHPNIVRFK 81
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
+ L I +E + G L + + + + +Q++ G+ Y H V HRD+
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 456 KCANILVDANGS--VKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
K N L+D + + +K+ FG +K++ L+ KS GT ++APEV+ K G AD+
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD-GKVADV 200
Query: 513 WSLGCTVLEMLTSQIPY 529
WS G T+ ML P+
Sbjct: 201 WSCGVTLYVMLVGAYPF 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 332 QKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
+K +LG G FG+V++G+ +G + + + +QS + + + +H
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 75
Query: 391 NIVQYYGTDKDESKLYIFLELVTK----GSLLNLYQRYH---LRDSQVSAYTRQILLGLK 443
+IV+ G S L+LVT+ GSLL+ + R H L + + QI G+
Sbjct: 76 HIVRLLGLCPGSS-----LQLVTQYLPLGSLLD-HVRQHRGALGPQLLLNWGVQIAKGMY 129
Query: 444 YLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA----FWMAPEVI 499
YL + +VHR++ N+L+ + V++ADFG+A +D + A WMA E I
Sbjct: 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 500 NNKNKGYGLPADIWSLGCTVLEMLT-SQIPYA 530
+ Y +D+WS G TV E++T PYA
Sbjct: 190 HFGK--YTHQSDVWSYGVTVWELMTFGAEPYA 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V G G AVK + D +QA E +++++ H N+VQ
Sbjct: 20 IGKGEFGDVMLG-DYRGNKVAVKCIKN-DATAQA------FLAEASVMTQLRHSNLVQLL 71
Query: 397 GTDKDE-SKLYIFLELVTKGSLLNLYQ---RYHLRDSQVSAYTRQILLGLKYLHDQDVVH 452
G +E LYI E + KGSL++ + R L + ++ + ++YL + VH
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 453 RDIKCANILVDANGSVKLADFGLAK-ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPAD 511
RD+ N+LV + K++DFGL K A+ D + + W APE + + + +D
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKWTAPEAL--REAAFSTKSD 187
Query: 512 IWSLGCTVLEMLT-SQIPY 529
+WS G + E+ + ++PY
Sbjct: 188 VWSFGILLWEIYSFGRVPY 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 380 EIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTR 436
E +++ +F+H NI++ G I E + GSL + + R H Q+ R
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLR 158
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF---- 492
+ G++YL D VHRD+ N+LVD+N K++DFGL++ + +D + T
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAYTTTGGKIP 217
Query: 493 --WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPM 532
W APE I + + +D+WS G + E+L + PY M
Sbjct: 218 IRWTAPEAIAFRT--FSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKE-------VSLLDQGSQAKQSISQLEQEIALLSRFEH 389
LG+GSFG VYEG++ VK+ + +++ + ++ I L E +++ F
Sbjct: 20 LGQGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKEFNC 74
Query: 390 ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQ--RYHLRDSQVSA---------YTRQI 438
++V+ G + +EL+T+G L + + R + ++ V A +I
Sbjct: 75 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 439 LLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----WM 494
G+ YL+ VHRD+ N V + +VK+ DFG+ + D G WM
Sbjct: 135 ADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 495 APEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
+PE + K+ + +D+WS G + E+ T ++ PY
Sbjct: 195 SPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPY 228
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 33/214 (15%)
Query: 337 LGRGSFGSVYEGISDDGFF---FAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
+GRG++G VY+ DG +A+K++ +G+ S + EIALL +H N++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACR---EIALLRELKHPNVI 81
Query: 394 --QYYGTDKDESKLYIFLELVTKGSLLNLYQRY----------HLRDSQVSAYTRQILLG 441
Q + K+++ + + L ++ + + L V + QIL G
Sbjct: 82 SLQKVFLSHADRKVWLLFD-YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 442 LKYLHDQDVVHRDIKCANILVDANGS----VKLADFGLAKATK-----LNDVKSCRGTAF 492
+ YLH V+HRD+K ANILV G VK+AD G A+ L D+ T +
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200
Query: 493 WMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQ 526
+ APE++ + Y DIW++GC E+LTS+
Sbjct: 201 YRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL----------------NLYQRYHLRDSQVS 432
N+V G K L + +E G+L +LY+ + L +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF-LTLEHLI 151
Query: 433 AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF 492
Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G A
Sbjct: 152 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 493 ----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 212 LPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSL--------------LNLYQRYHLRDSQVSAY 434
N+V G K L + +E G+L +LY+ + L + Y
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF-LTLEHLICY 149
Query: 435 TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-- 492
+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G A
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 493 --WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 210 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSL--------------LNLYQRYHLRDSQVSAY 434
N+V G K L + +E G+L +LY+ + L + Y
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF-LTLEHLIXY 149
Query: 435 TRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF-- 492
+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G A
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 493 --WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 210 LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 241
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL-----------------NLYQRYHLRDSQV 431
N+V G K L + +E G+L +LY+ + L +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF-LTLEHL 150
Query: 432 SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA 491
Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G A
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 492 F----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 211 RLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + +E G+L +LY+ + L
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 140
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 201 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + +E G+L +LY+ + L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 149
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 210 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 245
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 387 FEHENIVQYYGTDKDESKL----YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-- 440
H IV Y T + E+ YI +E V +L ++ H +++
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADA 125
Query: 441 --GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-----TKLNDVKSCRGTAFW 493
L + H ++HRD+K ANI++ A +VK+ DFG+A+A + + GTA +
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
++PE + +D++SLGC + E+LT + P+ VS +
Sbjct: 186 LSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 387 FEHENIVQYYGTDKDESKL----YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-- 440
H IV Y T + E+ YI +E V +L ++ H +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADA 125
Query: 441 --GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-----TKLNDVKSCRGTAFW 493
L + H ++HRD+K ANIL+ A +VK+ DFG+A+A + + GTA +
Sbjct: 126 CQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
++PE + +D++SLGC + E+LT + P+ VS +
Sbjct: 186 LSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + +E G+L +LY+ + L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 149
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 210 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 245
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 334 GDLLGRGSFGSVYEGI------SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
G LG G+FG V E SD AVK +L + + L E+ +LS
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTER-EALMSELKVLSYL 99
Query: 388 -EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV--------------- 431
H NIV G + E G LLN +R RDS +
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELA 157
Query: 432 ------SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK 485
+++ Q+ G+ +L ++ +HRD+ NIL+ K+ DFGLA+ K +
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 486 SCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAIFI 540
+G A WMAPE I N Y +D+WS G + E+ + PY M V + F
Sbjct: 218 VVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFY 274
Query: 541 KTV 543
K +
Sbjct: 275 KMI 277
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 387 FEHENIVQYYGTDKDESKL----YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-- 440
H IV Y T + E+ YI +E V +L ++ H +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADA 125
Query: 441 --GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-----TKLNDVKSCRGTAFW 493
L + H ++HRD+K ANI++ A +VK+ DFG+A+A + + GTA +
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
++PE + +D++SLGC + E+LT + P+ VS +
Sbjct: 186 LSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G G+FG + D + V +++G + +++ ++EI H NIV++
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENV---KREIINHRSLRHPNIVRFK 81
Query: 397 GTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI 455
+ L I +E + G L + + + + +Q++ G+ Y H V HRD+
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 456 KCANILVDANGS--VKLADFGLAKATKLN-DVKSCRGTAFWMAPEVINNKNKGYGLPADI 512
K N L+D + + +K+ FG +K++ L+ K GT ++APEV+ K G AD+
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD-GKVADV 200
Query: 513 WSLGCTVLEMLTSQIPY 529
WS G T+ ML P+
Sbjct: 201 WSCGVTLYVMLVGAYPF 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 334 GDLLGRGSFGSVYEGI------SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
G LG G+FG V E SD AVK +L + + L E+ +LS
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTER-EALMSELKVLSYL 106
Query: 388 -EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV--------------- 431
H NIV G + E G LLN +R RDS +
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDELA 164
Query: 432 ------SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK 485
+++ Q+ G+ +L ++ +HRD+ NIL+ K+ DFGLA+ K +
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 486 SCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAIFI 540
+G A WMAPE I N Y +D+WS G + E+ + PY M V + F
Sbjct: 225 VVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFY 281
Query: 541 KTV 543
K +
Sbjct: 282 KMI 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 23/218 (10%)
Query: 325 KRIITYWQKGDLLGRGSFGSVYEG----ISDDGFFFAVKEVSLLDQGSQAKQSISQLEQE 380
+R++T+ + ++G+G FG VY G + + A+K +S + + Q + +E
Sbjct: 19 ERVVTHSDR--VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE----MQQVEAFLRE 72
Query: 381 IALLSRFEHENIVQYYGTDKDESKL-YIFLELVTKGSLLNLYQRYHLRDSQVS---AYTR 436
L+ H N++ G L ++ L + G LL + R R+ V ++
Sbjct: 73 GLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ-FIRSPQRNPTVKDLISFGL 131
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK------ATKLNDVKSCRGT 490
Q+ G++YL +Q VHRD+ N ++D + +VK+ADFGLA+ + + R
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIP 528
W A E + + +D+WS G + E+LT P
Sbjct: 192 VKWTALESLQTYR--FTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 387 FEHENIVQYYGTDKDESKL----YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-- 440
H IV Y T + E+ YI +E V +L ++ H +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADA 125
Query: 441 --GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-----TKLNDVKSCRGTAFW 493
L + H ++HRD+K ANI++ A +VK+ DFG+A+A + + GTA +
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
++PE + +D++SLGC + E+LT + P+ VS +
Sbjct: 186 LSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 334 GDLLGRGSFGSVYEGI------SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
G LG G+FG V E SD AVK +L + + L E+ +LS
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTER-EALMSELKVLSYL 83
Query: 388 -EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV--------------- 431
H NIV G + E G LLN +R RDS +
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK--RDSFICSKTSPAIMEDDELA 141
Query: 432 ------SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK 485
+++ Q+ G+ +L ++ +HRD+ NIL+ K+ DFGLA+ K +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 486 SCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAIFI 540
+G A WMAPE I N Y +D+WS G + E+ + PY M V + F
Sbjct: 202 VVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFY 258
Query: 541 KTV 543
K +
Sbjct: 259 KMI 261
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + +E G+L +LY+ + L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 149
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 210 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 245
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
LGRG++G V + G AVK + + K+ + L+ + + V +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV---DCPFTVTF 98
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQ-D 449
YG E ++I EL SL Y++ + + + I+ L++LH +
Sbjct: 99 YGALFREGDVWICXEL-XDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 450 VVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS--CRGTAFWMAPEVINNK--NKG 505
V+HRD+K +N+L++A G VK DFG++ ++DV G + APE IN + KG
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGIS-GYLVDDVAKDIDAGCKPYXAPERINPELNQKG 216
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
Y + +DIWSLG T +E+ + PY
Sbjct: 217 YSVKSDIWSLGITXIELAILRFPY 240
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + E G+L +LY+ + L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 140
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 201 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + +E G+L +LY+ + L
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF-LTLEH 151
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 212 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 247
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 334 GDLLGRGSFGSVYEGI------SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
G LG G+FG V E SD AVK +L + + L E+ +LS
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTER-EALMSELKVLSYL 106
Query: 388 -EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV--------------- 431
H NIV G + E G LLN +R RDS +
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDELA 164
Query: 432 ------SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK 485
+++ Q+ G+ +L ++ +HRD+ NIL+ K+ DFGLA+ K +
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 486 SCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAIFI 540
+G A WMAPE I N Y +D+WS G + E+ + PY M V + F
Sbjct: 225 VVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFY 281
Query: 541 KTV 543
K +
Sbjct: 282 KMI 284
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + +E G+L +LY+ + L
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 186
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 247 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 282
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 370 AKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHL--R 427
+ + ++ L+ E+ + F H NIV Y T +++L++ + GS +L + +
Sbjct: 50 SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM 109
Query: 428 DSQVSAYTRQ-ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF---------GLAK 477
+ AY Q +L L Y+H VHR +K ++IL+ +G V L+ G +
Sbjct: 110 NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 169
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSA 537
+ K W++PEV+ +GY +DI+S+G T E+ +P+ M
Sbjct: 170 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 229
Query: 538 IFIK 541
+ K
Sbjct: 230 LLEK 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 100/243 (41%), Gaps = 42/243 (17%)
Query: 334 GDLLGRGSFGSVYEGI------SDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF 387
G LG G+FG V E SD AVK +L + + L E+ +LS
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTER-EALMSELKVLSYL 101
Query: 388 -EHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQV--------------- 431
H NIV G + E G LLN +R RDS +
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR--KRDSFICSKTSPAIMEDDELA 159
Query: 432 ------SAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK 485
+++ Q+ G+ +L ++ +HRD+ NIL+ K+ DFGLA+ K +
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 486 SCRGTAF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPYAPMECVSAIFI 540
+G A WMAPE I N Y +D+WS G + E+ + PY M V + F
Sbjct: 220 VVKGNARLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMP-VDSKFY 276
Query: 541 KTV 543
K +
Sbjct: 277 KMI 279
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 387 FEHENIVQYYGTDKDESKL----YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-- 440
H IV Y T + E+ YI +E V +L ++ H +++
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADA 125
Query: 441 --GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-----TKLNDVKSCRGTAFW 493
L + H ++HRD+K ANI++ A +VK+ DFG+A+A + + GTA +
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++PE + +D++SLGC + E+LT + P+
Sbjct: 186 LSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 370 AKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHL--R 427
+ + ++ L+ E+ + F H NIV Y T +++L++ + GS +L + +
Sbjct: 66 SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM 125
Query: 428 DSQVSAYTRQ-ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF---------GLAK 477
+ AY Q +L L Y+H VHR +K ++IL+ +G V L+ G +
Sbjct: 126 NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185
Query: 478 ATKLNDVKSCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSA 537
+ K W++PEV+ +GY +DI+S+G T E+ +P+ M
Sbjct: 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 245
Query: 538 IFIK 541
+ K
Sbjct: 246 LLEK 249
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 323 RFKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEI 381
R++RI LG G++G VY+ I A+K + L + + + E+
Sbjct: 35 RYRRITK-------LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EV 84
Query: 382 ALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS-----AYTR 436
+LL +H NI++ +L++ E N ++Y ++ VS ++
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-----NDLKKYMDKNPDVSMRVIKSFLY 139
Query: 437 QILLGLKYLHDQDVVHRDIKCANILVDANGS-----VKLADFGLAKATKLNDVKSCRG-T 490
Q++ G+ + H + +HRD+K N+L+ + + +K+ DFGLA+A + +
Sbjct: 140 QLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII 199
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEML 523
W P I ++ Y DIWS+ C EML
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 387 FEHENIVQYYGTDKDESKL----YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-- 440
H IV Y T + E+ YI +E V +L ++ H +++
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADA 142
Query: 441 --GLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-----TKLNDVKSCRGTAFW 493
L + H ++HRD+K ANI++ A +VK+ DFG+A+A + + GTA +
Sbjct: 143 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECVSAIF 539
++PE + +D++SLGC + E+LT + P+ VS +
Sbjct: 203 LSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 38/237 (16%)
Query: 337 LGRGSFGSVYEGISDDGFF----FAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI 392
+G G+FG V++ + G F + V +L + + A + ++E AL++ F++ NI
Sbjct: 55 IGEGAFGRVFQARAP-GLLPYEPFTMVAVKMLKEEASADMQ-ADFQREAALMAEFDNPNI 112
Query: 393 VQYYGTDKDESKLYIFLELVTKGSL------LNLYQRYHLRDSQVS-------------- 432
V+ G + + E + G L ++ + L S +S
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 433 -----AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC 487
RQ+ G+ YL ++ VHRD+ N LV N VK+ADFGL++ D
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 488 RGT----AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQI-PYAPMECVSAIF 539
G WM PE I Y +D+W+ G + E+ + + PY M I+
Sbjct: 233 DGNDAIPIRWMPPESIFYNR--YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + E G+L +LY+ + L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 140
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 201 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 334 GDLLGRGSFGSVYE----GISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH 389
G LGRG+FG V E GI V V +L +G+ + + + + L+ H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 390 ENIVQYYGT-DKDESKLYIFLELVTKGSLL------------------NLYQRYHLRDSQ 430
N+V G K L + E G+L +LY+ + L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-LTLEH 140
Query: 431 VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT 490
+ Y+ Q+ G+++L + +HRD+ NIL+ VK+ DFGLA+ + +G
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 491 AF----WMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
A WMAPE I ++ Y + +D+WS G + E+ +
Sbjct: 201 ARLPLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFS 236
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V+ G G AVK S ++ S + E EI HENI+ +
Sbjct: 50 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFR------EAEIYQTVMLRHENILGFI 102
Query: 397 GTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-- 450
D ++ + L LV+ GSL + RY + + GL +LH + V
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 451 ------VHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCR--GTAFWMAPEV 498
HRD+K NILV NG+ +AD GLA AT D+ GT +MAPEV
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 222
Query: 499 ----INNKNKGYGLPADIWSLGCTVLEM 522
IN K+ ADI+++G E+
Sbjct: 223 LDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V+ G G AVK S ++ S + E EI HENI+ +
Sbjct: 12 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFR------EAEIYQTVMLRHENILGFI 64
Query: 397 GTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-- 450
D ++ + L LV+ GSL + RY + + GL +LH + V
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 451 ------VHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCR--GTAFWMAPEV 498
HRD+K NILV NG+ +AD GLA AT D+ GT +MAPEV
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 184
Query: 499 ----INNKNKGYGLPADIWSLGCTVLEM 522
IN K+ ADI+++G E+
Sbjct: 185 LDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQL 377
IS GR I+ +G G V++ +++ +A+K V+L + +Q ++
Sbjct: 51 ISVKGRIYSILKQ------IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSY 101
Query: 378 EQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYT 435
EIA L++ + + I++ Y + + +Y+ +E L ++ + + +Y
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW 161
Query: 436 RQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----GTA 491
+ +L + +H +VH D+K AN L+ +G +KL DFG+A + + + GT
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 492 FWMAPEVINNKNKG---------YGLPADIWSLGCTVLEMLTSQIPY 529
+M PE I + + +D+WSLGC + M + P+
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V+ G G AVK S ++ S + E EI HENI+ +
Sbjct: 11 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFR------EAEIYQTVMLRHENILGFI 63
Query: 397 GTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-- 450
D ++ + L LV+ GSL + RY + + GL +LH + V
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 451 ------VHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCR--GTAFWMAPEV 498
HRD+K NILV NG+ +AD GLA AT D+ GT +MAPEV
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 183
Query: 499 ----INNKNKGYGLPADIWSLGCTVLEM 522
IN K+ ADI+++G E+
Sbjct: 184 LDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V+ G G AVK S ++ S + E EI HENI+ +
Sbjct: 17 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFR------EAEIYQTVMLRHENILGFI 69
Query: 397 GTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-- 450
D ++ + L LV+ GSL + RY + + GL +LH + V
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 451 ------VHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCR--GTAFWMAPEV 498
HRD+K NILV NG+ +AD GLA AT D+ GT +MAPEV
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 189
Query: 499 ----INNKNKGYGLPADIWSLGCTVLEM 522
IN K+ ADI+++G E+
Sbjct: 190 LDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V+ G G AVK S ++ S + E EI HENI+ +
Sbjct: 37 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFR------EAEIYQTVMLRHENILGFI 89
Query: 397 GTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-- 450
D ++ + L LV+ GSL + RY + + GL +LH + V
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 451 ------VHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCR--GTAFWMAPEV 498
HRD+K NILV NG+ +AD GLA AT D+ GT +MAPEV
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 209
Query: 499 ----INNKNKGYGLPADIWSLGCTVLEM 522
IN K+ ADI+++G E+
Sbjct: 210 LDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY 396
+G+G FG V+ G G AVK S ++ S + E EI HENI+ +
Sbjct: 14 IGKGRFGEVWRG-KWRGEEVAVKIFSSREERSWFR------EAEIYQTVMLRHENILGFI 66
Query: 397 GTDKDESKLYIFLELVT----KGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-- 450
D ++ + L LV+ GSL + RY + + GL +LH + V
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 451 ------VHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCR--GTAFWMAPEV 498
HRD+K NILV NG+ +AD GLA AT D+ GT +MAPEV
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 186
Query: 499 ----INNKNKGYGLPADIWSLGCTVLEM 522
IN K+ ADI+++G E+
Sbjct: 187 LDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 28/206 (13%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
L+G G FG VY+G+ DG +V+L + ++ Q I + E EI LS H ++V
Sbjct: 46 LIGHGVFGKVYKGVLRDG-----AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR------QILLG----LKYL 445
G + +++ + + + G+L + HL S + + +I +G L YL
Sbjct: 101 IGFCDERNEMILIYKYMENGNL-----KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA-KATKLNDVK---SCRGTAFWMAPEVINN 501
H + ++HRD+K NIL+D N K+ DFG++ K T+L+ +GT ++ PE
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF-- 213
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQ 526
KG +D++S G + E+L ++
Sbjct: 214 -IKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 339 RGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGT 398
RG FG V++ + + AVK + D+ S Q E E+ L +HENI+Q+ G
Sbjct: 34 RGRFGCVWKAQLLNEYV-AVKIFPIQDKQSW------QNEYEVYSLPGMKHENILQFIGA 86
Query: 399 DKDESKLYIFLELVT----KGSL--------LNLYQRYHLRDSQVS--AYTRQILLGLKY 444
+K + + + L L+T KGSL ++ + H+ ++ AY + + GLK
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 445 LHDQDVVHRDIKCANILVDANGSVKLADFGLA----KATKLNDVKSCRGTAFWMAPEVIN 500
H + HRDIK N+L+ N + +ADFGLA D GT +MAPEV+
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 501 ---NKNKGYGLPADIWSLGCTVLEM 522
N + L D++++G + E+
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQ 394
LG+G++G V++ I G AVK++ Q S Q + +EI +L+ HENIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQ---RTFREIMILTELSGHENIVN 73
Query: 395 YYG-----TDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ 448
D+D ++ ++E + N+ + H Q Y Q++ +KYLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH---KQYVVY--QLIKVIKYLHSG 128
Query: 449 DVVHRDIKCANILVDANGSVKLADFGLAKA------------TKLND-----------VK 485
++HRD+K +NIL++A VK+ADFGL+++ +N+ +
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 486 SCRGTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
T ++ APE++ K Y D+WSLGC + E+L + P P
Sbjct: 189 DYVATRWYRAPEILLGSTK-YTKGIDMWSLGCILGEILCGK-PIFP 232
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQL 377
IS GR I+ +G G V++ +++ +A+K V+L + +Q ++
Sbjct: 51 ISVKGRIYSILKQ------IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSY 101
Query: 378 EQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSA 433
EIA L++ + + I++ Y D + + YI++ + LN L ++ + + +
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLY--DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKS 159
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----G 489
Y + +L + +H +VH D+K AN L+ +G +KL DFG+A + + + G
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 490 TAFWMAPEVINNKNKG---------YGLPADIWSLGCTVLEMLTSQIPY 529
T +M PE I + + +D+WSLGC + M + P+
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 28/206 (13%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
L+G G FG VY+G+ DG +V+L + ++ Q I + E EI LS H ++V
Sbjct: 46 LIGHGVFGKVYKGVLRDG-----AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR------QILLG----LKYL 445
G + +++ + + + G+L + HL S + + +I +G L YL
Sbjct: 101 IGFCDERNEMILIYKYMENGNL-----KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA-KATKLNDVK---SCRGTAFWMAPEVINN 501
H + ++HRD+K NIL+D N K+ DFG++ K T+L +GT ++ PE
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF-- 213
Query: 502 KNKG-YGLPADIWSLGCTVLEMLTSQ 526
KG +D++S G + E+L ++
Sbjct: 214 -IKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQL 377
IS GR I+ +G G V++ +++ +A+K V+L + +Q ++
Sbjct: 7 ISVKGRIYSILKQ------IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSY 57
Query: 378 EQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLELVTKGSL-LN--LYQRYHLRDSQVS 432
EIA L++ + + I++ Y + + +Y+ +E G++ LN L ++ + +
Sbjct: 58 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERK 114
Query: 433 AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR---- 488
+Y + +L + +H +VH D+K AN L+ +G +KL DFG+A + + +
Sbjct: 115 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 489 GTAFWMAPEVINNKNKG---------YGLPADIWSLGCTVLEMLTSQIPY 529
GT +M PE I + + +D+WSLGC + M + P+
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 34/225 (15%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
G+L+G+G FG VY G + + L+D + + ++E+ + HEN+V
Sbjct: 38 GELIGKGRFGQVYHGR-----WHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSA---YTRQI----LLGLKYLH 446
+ G L I L +L ++ +RD+++ TRQI + G+ YLH
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSV-----VRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 447 DQDVVHRDIKCANILVDANGSVKLADFGLAKATKL-------NDVKSCRGTAFWMAPEVI 499
+ ++H+D+K N+ D NG V + DFGL + + + ++ G +APE+I
Sbjct: 148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 500 NNKNKG-------YGLPADIWSLGCTVLEMLTSQIPY--APMECV 535
+ + +D+++LG E+ + P+ P E +
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQL 377
IS GR I+ +G G V++ +++ +A+K V+L + +Q ++
Sbjct: 3 ISVKGRIYSILKQ------IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSY 53
Query: 378 EQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLELVTKGSL-LN--LYQRYHLRDSQVS 432
EIA L++ + + I++ Y + + +Y+ +E G++ LN L ++ + +
Sbjct: 54 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERK 110
Query: 433 AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR---- 488
+Y + +L + +H +VH D+K AN L+ +G +KL DFG+A + + +
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 169
Query: 489 GTAFWMAPEVINNKNKG---------YGLPADIWSLGCTVLEMLTSQIPY 529
GT +M PE I + + +D+WSLGC + M + P+
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 80
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHRD+ N +V + +VK+ DFG+ + D G W
Sbjct: 136 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 196 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 230
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQL 377
IS GR I+ +G G V++ +++ +A+K V+L + +Q ++
Sbjct: 4 ISVKGRIYSILK------QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSY 54
Query: 378 EQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLELVTKGSL-LN--LYQRYHLRDSQVS 432
EIA L++ + + I++ Y + + +Y+ +E G++ LN L ++ + +
Sbjct: 55 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERK 111
Query: 433 AYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR---- 488
+Y + +L + +H +VH D+K AN L+ +G +KL DFG+A + + +
Sbjct: 112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 489 GTAFWMAPEVINNKNKG---------YGLPADIWSLGCTVLEMLTSQIPY 529
GT +M PE I + + +D+WSLGC + M + P+
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 83
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHRD+ N +V + +VK+ DFG+ + D G W
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 83
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHRD+ N +V + +VK+ DFG+ + D G W
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 24/204 (11%)
Query: 337 LGRGSFGSVY---EGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LGRG FG V+ E S + +V DQ +++EI++L+ H NI+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ--------VLVKKEISILNIARHRNIL 64
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQ 448
+ + + +L + E + S L++++R + L + ++ +Y Q+ L++LH
Sbjct: 65 HLHESFESMEELVMIFEFI---SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 449 DVVHRDIKCANILVDA--NGSVKLADFGLAKATKLNDVKSCRGTA-FWMAPEVINNKNKG 505
++ H DI+ NI+ + ++K+ +FG A+ K D TA + APEV +++
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV--HQHDV 179
Query: 506 YGLPADIWSLGCTVLEMLTSQIPY 529
D+WSLG V +L+ P+
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPF 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 331 WQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQE-----IALL 384
W+ + LG G FG V I D G A+K Q +Q +S +E I ++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK---------QCRQELSPKNRERWCLEIQIM 66
Query: 385 SRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYH----LRDSQVSAY 434
+ H N+V KL + +E G L ++ L++ +
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 435 TRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCR--- 488
I L+YLH+ ++HRD+K NI++ K+ D G AK +L+ + C
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFV 184
Query: 489 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
GT ++APE++ K Y + D WS G E +T P+ P
Sbjct: 185 GTLQYLAPELLEQKK--YTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 331 WQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQE-----IALL 384
W+ + LG G FG V I D G A+K Q +Q +S +E I ++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK---------QCRQELSPKNRERWCLEIQIM 67
Query: 385 SRFEHENIVQYYGTDKDESKL------YIFLELVTKGSLLNLYQRYH----LRDSQVSAY 434
+ H N+V KL + +E G L ++ L++ +
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 435 TRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATKLNDVKSCR--- 488
I L+YLH+ ++HRD+K NI++ K+ D G AK +L+ + C
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFV 185
Query: 489 GTAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAP 531
GT ++APE++ K Y + D WS G E +T P+ P
Sbjct: 186 GTLQYLAPELLEQKK--YTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 375 SQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSA 433
++ ++E R + ++V + + + +LY+ L+ L +R L + A
Sbjct: 79 TRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVA 138
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT---KLNDVKSCRGT 490
RQI L H HRD+K NILV A+ L DFG+A AT KL + + GT
Sbjct: 139 IVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGT 198
Query: 491 AFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPY 529
++ APE + + Y ADI++L C + E LT PY
Sbjct: 199 LYYXAPERFSESHATYR--ADIYALTCVLYECLTGSPPY 235
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH--ENIVQ 394
+G G V++ +++ +A+K V+L + +Q ++ EIA L++ + + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 395 YYGTDKDESKLYIFLELVTKGSL-LN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
Y + + +Y+ +E G++ LN L ++ + + +Y + +L + +H +V
Sbjct: 93 LYDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKG-- 505
H D+K AN L+ +G +KL DFG+A + + + GT +M PE I + +
Sbjct: 150 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 506 -------YGLPADIWSLGCTVLEMLTSQIPY 529
+D+WSLGC + M + P+
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE----- 390
++G+GSFG V + + V + L K+ Q +EI +L +
Sbjct: 104 VIGKGSFGQVVKA-----YDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 391 -NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ------VSAYTRQILLGLK 443
N++ + + + EL++ +NLY+ Q V + IL L
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 444 YLHDQDVVHRDIKCANILVDANG--SVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINN 501
LH ++H D+K NIL+ G +K+ DFG + + V + + F+ APEVI
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFYRAPEVILG 273
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPYAPME 533
YG+P D+WSLGC + E+LT P P E
Sbjct: 274 AR--YGMPIDMWSLGCILAELLTG-YPLLPGE 302
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 337 LGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH-ENIVQ 394
LGRG F V + IS G +A K L + + + +++ EIA+L + ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAK---FLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 395 YYGTDKDESKLYIFLELVTKGSLLNL---YQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
+ ++ S++ + LE G + +L + ++ V +QIL G+ YLH ++V
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 452 HRDIKCANILVDAN---GSVKLADFGLA-KATKLNDVKSCRGTAFWMAPEVINNKNKGYG 507
H D+K NIL+ + G +K+ DFG++ K +++ GT ++APE++N
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN--YDPIT 211
Query: 508 LPADIWSLGCTVLEMLTSQIPYA 530
D+W++G +LT P+
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFV 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 82
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHRD+ N +V + +VK+ DFG+ + D G W
Sbjct: 138 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 198 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 232
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH--ENIVQ 394
+G G V++ +++ +A+K V+L + +Q ++ EIA L++ + + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 395 YYGTDKDESKLYIFLELVTKGSL-LN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQDVV 451
Y + + +Y+ +E G++ LN L ++ + + +Y + +L + +H +V
Sbjct: 93 LYDYEITDQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 452 HRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----GTAFWMAPEVINNKNKG-- 505
H D+K AN L+ +G +KL DFG+A + + + GT +M PE I + +
Sbjct: 150 HSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 506 -------YGLPADIWSLGCTVLEMLTSQIPY 529
+D+WSLGC + M + P+
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 83
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHRD+ N +V + +VK+ DFG+ + D G W
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE----- 390
++G+GSFG V + V + L K+ Q +EI +L +
Sbjct: 104 VIGKGSFGQVVKAYDH-----KVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 391 -NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ------VSAYTRQILLGLK 443
N++ + + + EL++ +NLY+ Q V + IL L
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 444 YLHDQDVVHRDIKCANILVDANG--SVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINN 501
LH ++H D+K NIL+ G +K+ DFG + + V + + F+ APEVI
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFYRAPEVILG 273
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPYAPME 533
YG+P D+WSLGC + E+LT P P E
Sbjct: 274 AR--YGMPIDMWSLGCILAELLTG-YPLLPGE 302
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 29/229 (12%)
Query: 318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQL 377
IS GR I+ +G G V++ +++ +A+K V+L + +Q ++
Sbjct: 51 ISVKGRIYSILKQ------IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ---TLDSY 101
Query: 378 EQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSA 433
EIA L++ + + I++ Y D + + YI++ + LN L ++ + + +
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLY--DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKS 159
Query: 434 YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR----G 489
Y + +L + +H +VH D+K AN L+ +G +KL DFG+A + + + G
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
Query: 490 TAFWMAPEVINNKNKG---------YGLPADIWSLGCTVLEMLTSQIPY 529
+M PE I + + +D+WSLGC + M + P+
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 40/221 (18%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG GS G+V S G AVK + L+D A I L + +H N+++Y
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESD------DHPNVIRY 74
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--------AYTRQILLGLKYLHD 447
Y ++ + LYI LEL +L +L + ++ D + + RQI G+ +LH
Sbjct: 75 YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 448 QDVVHRDIKCANILVDA-------------NGSVKLADFGLAK------ATKLNDVKSCR 488
++HRD+K NILV N + ++DFGL K ++ ++ +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 489 GTAFWMAPEVINNKN-----KGYGLPADIWSLGCTVLEMLT 524
GT+ W APE++ N + DI+S+GC +L+
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 40/219 (18%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG GS G+V S G AVK + L+D A I L + +H N+++Y
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESD------DHPNVIRY 92
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--------AYTRQILLGLKYLHD 447
Y ++ + LYI LEL +L +L + ++ D + + RQI G+ +LH
Sbjct: 93 YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 448 QDVVHRDIKCANILVDA-------------NGSVKLADFGLAKATKLN--------DVKS 486
++HRD+K NILV N + ++DFGL K KL+ ++ +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNN 209
Query: 487 CRGTAFWMAPEVINNKNK-GYGLPADIWSLGCTVLEMLT 524
GT+ W APE++ K DI+S+GC +L+
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 40/219 (18%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG GS G+V S G AVK + L+D A I L + +H N+++Y
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESD------DHPNVIRY 92
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--------AYTRQILLGLKYLHD 447
Y ++ + LYI LEL +L +L + ++ D + + RQI G+ +LH
Sbjct: 93 YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 448 QDVVHRDIKCANILVDA-------------NGSVKLADFGLAKATKLN--------DVKS 486
++HRD+K NILV N + ++DFGL K KL+ ++ +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNN 209
Query: 487 CRGTAFWMAPEVINNKNK-GYGLPADIWSLGCTVLEMLT 524
GT+ W APE++ K DI+S+GC +L+
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 44/223 (19%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQY 395
+LG GS G+V S G AVK + L+D A I L + +H N+++Y
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIALMEIKLLTESD------DHPNVIRY 74
Query: 396 YGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVS--------AYTRQILLGLKYLHD 447
Y ++ + LYI LEL +L +L + ++ D + + RQI G+ +LH
Sbjct: 75 YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 448 QDVVHRDIKCANILVDA-------------NGSVKLADFGLAKATKLN--------DVKS 486
++HRD+K NILV N + ++DFGL K KL+ ++ +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNN 191
Query: 487 CRGTAFWMAPEVINNKN-----KGYGLPADIWSLGCTVLEMLT 524
GT+ W APE++ N + DI+S+GC +L+
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 29/216 (13%)
Query: 337 LGRGSFGSV--YEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ 394
LG G F V EG+ D G F+A+K + +Q Q + ++E + F H NI++
Sbjct: 37 LGEGGFSYVDLVEGLHD-GHFYALKRILCHEQ-----QDREEAQREADMHRLFNHPNILR 90
Query: 395 YYGTDKDE----SKLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYL 445
E + ++ L +G+L N +R L + Q+ I GL+ +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 446 HDQDVVHRDIKCANILVDANGSVKLADFGLA-----------KATKLNDVKSCRGTAFWM 494
H + HRD+K NIL+ G L D G +A L D + R T +
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 495 APEVINNKNKGY-GLPADIWSLGCTVLEMLTSQIPY 529
APE+ + ++ D+WSLGC + M+ + PY
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 83
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHR++ N +V + +VK+ DFG+ + D G W
Sbjct: 139 IADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 199 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 337 LGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV 393
LG+GSFG VYEG + D G V +++ + ++ I L E +++ F ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKGFTCHHVV 84
Query: 394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTR----------------Q 437
+ G + +EL+ G L + +LR + A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDL-----KSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 438 ILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF----W 493
I G+ YL+ + VHR++ N +V + +VK+ DFG+ + D G W
Sbjct: 140 IADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 494 MAPEVINNKNKGYGLPADIWSLGCTVLEMLT-SQIPY 529
MAPE + K+ + +D+WS G + E+ + ++ PY
Sbjct: 200 MAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPY 234
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE----- 390
++G+G FG V + V + L K+ Q +EI +L +
Sbjct: 104 VIGKGXFGQVVKAYDH-----KVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 391 -NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ------VSAYTRQILLGLK 443
N++ + + + EL++ +NLY+ Q V + IL L
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 444 YLHDQDVVHRDIKCANILVDANG--SVKLADFGLAKATKLNDVKSCRGTAFWMAPEVINN 501
LH ++H D+K NIL+ G +K+ DFG + + V + F+ APEVI
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYXXIQSRFYRAPEVILG 273
Query: 502 KNKGYGLPADIWSLGCTVLEMLTSQIPYAPME 533
YG+P D+WSLGC + E+LT P P E
Sbjct: 274 AR--YGMPIDMWSLGCILAELLTG-YPLLPGE 302
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 45/228 (19%)
Query: 334 GDLLGRGSFGSVYEGIS---DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
G LG G FG V + + + V +L + + + + L E +L + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-LRDLLSEFNVLKQVNHP 86
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ-------------------- 430
++++ YG + L + +E GSL R LR+S+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSL-----RGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 431 ----------VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK 480
+ ++ QI G++YL + +VHRD+ NILV +K++DFGL++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 481 LND--VKSCRG--TAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
D VK +G WMA E + + Y +D+WS G + E++T
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 45/228 (19%)
Query: 334 GDLLGRGSFGSVYEGIS---DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE 390
G LG G FG V + + + V +L + + + + L E +L + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-LRDLLSEFNVLKQVNHP 86
Query: 391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ-------------------- 430
++++ YG + L + +E GSL R LR+S+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSL-----RGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 431 ----------VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK 480
+ ++ QI G++YL + +VHRD+ NILV +K++DFGL++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 481 LND--VKSCRG--TAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
D VK +G WMA E + + Y +D+WS G + E++T
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 55/233 (23%)
Query: 334 GDLLGRGSFGSVYEGISDDGFFFAVK--------EVSLLDQGSQAKQSISQLEQEIALLS 385
G LG G FG V + + F +K V +L + + + + L E +L
Sbjct: 28 GKTLGEGEFGKVVKATA-----FHLKGRAGYTTVAVKMLKENASPSE-LRDLLSEFNVLK 81
Query: 386 RFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ--------------- 430
+ H ++++ YG + L + +E GSL R LR+S+
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL-----RGFLRESRKVGPGYLGSGGSRNS 136
Query: 431 ---------------VSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL 475
+ ++ QI G++YL + +VHRD+ NILV +K++DFGL
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 476 AKATKLND--VKSCRG--TAFWMAPEVINNKNKGYGLPADIWSLGCTVLEMLT 524
++ D VK +G WMA E + + Y +D+WS G + E++T
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVT 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,256,537
Number of Sequences: 62578
Number of extensions: 537648
Number of successful extensions: 4114
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1144
Number of HSP's gapped (non-prelim): 1141
length of query: 554
length of database: 14,973,337
effective HSP length: 104
effective length of query: 450
effective length of database: 8,465,225
effective search space: 3809351250
effective search space used: 3809351250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)