BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008761
(554 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/543 (71%), Positives = 448/543 (82%), Gaps = 29/543 (5%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FIDRS VRILLCDND+ SSD +F+LL CSYQVTSVRS RQVIDALNAEG DID+ILAEV
Sbjct: 21 FIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEV 80
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLPMTKG+KMLKYI RDKEL+RIP+IMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN
Sbjct: 81 DLPMTKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 140
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTHMWRRRRMLGLAEKNIL+YDFD+ ASDPSDANTNS T+FSDDTDDKSR S NPE+ +
Sbjct: 141 LWTHMWRRRRMLGLAEKNILNYDFDVAASDPSDANTNS-TMFSDDTDDKSRMSANPEMVV 199
Query: 207 STHQETESVPVATATVVASTSGTAAVEP--IDASECGPDVPGISDRRT----AGPKKIEL 260
S HQE E V ++ AT+ S A EP ++ EC PDVPGISDRRT +GPKK EL
Sbjct: 200 SVHQEDE-VSLSNATI---DSTDVAAEPPVVNQLECRPDVPGISDRRTGQLLSGPKKSEL 255
Query: 261 RIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEA 320
++GESSAFFTYVKS+M + +S I N+++SA Q+ RMEE+ Q ++ V+DT+ HENGEA
Sbjct: 256 KVGESSAFFTYVKSSMIKTNSQGIPNINESAPQHSRMEERVQAWSEKGVNDTQEHENGEA 315
Query: 321 WENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMPPTRNE---- 374
WENYSQG+DF SS+S+PDSLS+E S TPP +F Q RN K E+F Q + P RNE
Sbjct: 316 WENYSQGDDFPSSNSIPDSLSVEMSCTPPAPIEFVQGRNSKGEEFSQVPIHP-RNEHQVD 374
Query: 375 ----PPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH----SMLPQYNHLPQCVPH 426
P Y Y MSG MNQVM+P SSAQ+Y K+LH++QN+ +MLPQYNHLPQC PH
Sbjct: 375 ISGFPGHTAYPYCMSGVMNQVMMP-SSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPH 433
Query: 427 VNGMASFPYYPINMCLQPGQVS-ANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKER 485
V G+ASFPYYP+++CLQPGQ+S + WPSYGNS STEVK+ KVDRREAALIKFRQKRKER
Sbjct: 434 VPGVASFPYYPVSICLQPGQMSTTHPWPSYGNSSSTEVKLGKVDRREAALIKFRQKRKER 493
Query: 486 CFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVDYDEDEDEEEEM-ASRD 544
CFDKKIRYVNRKRLAERRPRVRGQFVRK+NGVNVDLNG+P+SVD+DEDE+E EE ASRD
Sbjct: 494 CFDKKIRYVNRKRLAERRPRVRGQFVRKMNGVNVDLNGRPASVDFDEDEEEYEEENASRD 553
Query: 545 SSP 547
S+P
Sbjct: 554 STP 556
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/549 (68%), Positives = 440/549 (80%), Gaps = 39/549 (7%)
Query: 1 MESKEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVT 60
MES E++LN+E G GD FIDRSKVRIL+CDND+ S + V +LL+KCSYQVT
Sbjct: 1 MESMEVSLNRE-GGGNSSKGGGGGDAFIDRSKVRILVCDNDAKSLEEVSTLLLKCSYQVT 59
Query: 61 SVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEV 120
SVRS RQVIDALNAEG++ID+ILAE+DLP+ KG+K+LKYI RD +L+RIPVIMMSAQDEV
Sbjct: 60 SVRSARQVIDALNAEGANIDIILAELDLPLAKGMKLLKYINRDNDLRRIPVIMMSAQDEV 119
Query: 121 SVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDA 180
SVVVKCLRLGAADYLVKPLRTNELLNLWTH+WRRRRMLGLAEKNIL+YDFDLVASDPSDA
Sbjct: 120 SVVVKCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLGLAEKNILNYDFDLVASDPSDA 179
Query: 181 NTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEP--IDAS 238
NTNSTTLFSDDTDD+S RSTNPE+G+S H+E E S AAVEP I+
Sbjct: 180 NTNSTTLFSDDTDDRSCRSTNPEMGLSVHEEDE-------------SAGAAVEPPYIELD 226
Query: 239 ECGPDVPGISDRRT----AGPKKIELRIGE-SSAFFTYVKSNMPRDSSPRIVNVDDSAAQ 293
E PDVP ISDRRT +GPKK EL+IGE SSAFFTYVK++ + SSP + NV+++ AQ
Sbjct: 227 EYRPDVPKISDRRTGQFSSGPKKSELKIGESSSAFFTYVKTSTLQKSSPGVANVEENVAQ 286
Query: 294 NVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--D 351
VRM E Q C QQVV+D +I+++GE WE+YSQG++F SS+S+PDS S+ERSSTP +
Sbjct: 287 -VRMGENHQACVQQVVNDPQINDSGEVWESYSQGDEFPSSNSMPDSFSIERSSTPSASME 345
Query: 352 FPQNRNFKDEKFFQPQMPPTRNE--------PPQATYQYYMSGAMNQVMLPSSSAQMYQK 403
PQ R+ KDE+F Q P RNE P Q + Y MSG +NQVM+P S+AQ+Y K
Sbjct: 346 LPQQRDLKDERFSQVLSHP-RNEHQLDASGLPAQTAFPYCMSGVVNQVMMP-SAAQLYHK 403
Query: 404 NLHELQNHS---MLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSA-NSWPSYGNSP 459
NLH+LQNHS M+ QY+HLPQC PHVNGMA FPYYP+N+CLQPGQ+SA +SWP +G+
Sbjct: 404 NLHDLQNHSPKAMMSQYHHLPQCPPHVNGMAPFPYYPVNICLQPGQMSASHSWP-FGSPS 462
Query: 460 STEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
S+EV ++KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV
Sbjct: 463 SSEVNLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 522
Query: 520 DLNGQPSSV 528
DLNG P+SV
Sbjct: 523 DLNGHPTSV 531
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/573 (68%), Positives = 450/573 (78%), Gaps = 42/573 (7%)
Query: 1 MESKEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVT 60
ME KE N SG G G+G IDRSKVRILLCDNDS SS+ VF+LL+KCSYQVT
Sbjct: 1 MEGKEPNK----SGGG-------GEGLIDRSKVRILLCDNDSKSSEEVFTLLLKCSYQVT 49
Query: 61 SVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEV 120
SVRS RQVIDALNAEG DID+IL+EVDLPM KG+KMLKYITRDKEL+RIPVIMMSAQDEV
Sbjct: 50 SVRSARQVIDALNAEGPDIDIILSEVDLPMNKGMKMLKYITRDKELRRIPVIMMSAQDEV 109
Query: 121 SVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDA 180
S+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNIL YDFDLVASDPSDA
Sbjct: 110 SIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILIYDFDLVASDPSDA 169
Query: 181 NTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVE--PIDAS 238
NTNSTTLFSDDTDDKSR+ NPEIG+STHQE VV SGTAA E P +
Sbjct: 170 NTNSTTLFSDDTDDKSRKCLNPEIGVSTHQE---------DVVNRGSGTAADEPPPCNRL 220
Query: 239 ECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQN 294
E PDVPGISDRRTA GPKK EL+IGESSAFFTYVKS+ ++ S +D +
Sbjct: 221 EYRPDVPGISDRRTAQLSSGPKKSELKIGESSAFFTYVKSSTIKNDSQGFPTTEDYTVPS 280
Query: 295 VRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP--TDF 352
+R EE Q C QQVV+D ++HEN E W++Y Q +DFRSSSS+PDS+S+ERS TPP ++F
Sbjct: 281 LRAEENLQACAQQVVNDAQLHENRETWQSYPQ-DDFRSSSSIPDSISLERSCTPPMSSEF 339
Query: 353 PQNRNFKDEKFFQPQMPP-------TRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNL 405
PQ RNFKD+K Q P T Q+ Y YYMSG +NQV++P SAQ+YQKNL
Sbjct: 340 PQ-RNFKDDKLPQVFTNPINELQLDTSGLSTQSMYPYYMSGVVNQVIMP-PSAQLYQKNL 397
Query: 406 HELQNHS---MLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPST 461
HELQN++ MLPQYNHL QC PHV MASFPYYP+N+CLQPGQ+ + WPS+G S S
Sbjct: 398 HELQNNAPSPMLPQYNHLSQCSPHVASMASFPYYPVNLCLQPGQMPPTHPWPSFGGSSSP 457
Query: 462 EVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDL 521
+VK+ K+DRREAAL+KFRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRK+NGVNVDL
Sbjct: 458 DVKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKLNGVNVDL 517
Query: 522 NGQPSSVDYDEDEDEEEEMASRDSSPDNDTSGN 554
NGQP++ +++E++E+E+A R SS + D SG+
Sbjct: 518 NGQPAADYDEDEEEDEDELALRGSSLEEDASGS 550
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/573 (64%), Positives = 443/573 (77%), Gaps = 38/573 (6%)
Query: 1 MESK-EMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQV 59
MES E+NLN E N KS GDGF+DRSKVRILLCDNDS SS VF+LL++CSYQV
Sbjct: 1 MESGDEINLNIESGN----NGKSGGDGFVDRSKVRILLCDNDSKSSQEVFTLLLRCSYQV 56
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSV+S RQVIDALNAEG ID+ILAE+DLPM KG+KMLKYI +DKE +RIPVIMMSAQDE
Sbjct: 57 TSVKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDE 116
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSD 179
VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGL EKNIL+YDFDLV SDPSD
Sbjct: 117 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVVSDPSD 176
Query: 180 ANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPID--A 237
ANTNSTTLFSDDTDDKS+RSTNPE+G+S QE ES +A A V EP D A
Sbjct: 177 ANTNSTTLFSDDTDDKSKRSTNPEVGISVQQEQEST-IAIAAAVE--------EPPDAHA 227
Query: 238 SECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQ 293
SECGPDV G++D +TA GPKK ELRIGESSAFFTYVK+++ + + +VNVD + A
Sbjct: 228 SECGPDVDGVNDHQTAHFSSGPKKSELRIGESSAFFTYVKASILKSNLEGVVNVDKNGAT 287
Query: 294 NVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--D 351
+VRME Q C QQ V+D +I ENGEA+E+ SQ +D SS+S+PDSLS+ERS TPP +
Sbjct: 288 HVRMEVMHQTCAQQGVNDLQIRENGEAYESQSQ-DDLPSSTSIPDSLSIERSCTPPASME 346
Query: 352 FPQNRNFKDEKFFQPQMPP----------TRNEPPQATYQYYMSGAMNQVMLPSSSAQMY 401
Q +++++E Q M P Q Y YY+SG +N VM+PSS+ +
Sbjct: 347 VSQQKHYREENLHQGVMHPRNGTHCSELEVSGMASQQVYPYYISGVVNHVMMPSSAQMYH 406
Query: 402 QKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGN 457
QKN+ +LQNH +M+ QY+HLPQ PH GM SFPYYP+++CLQPGQ+ + +SW S+GN
Sbjct: 407 QKNIQDLQNHPSSAMISQYSHLPQGGPHGTGMTSFPYYPMSICLQPGQIPNPHSWQSFGN 466
Query: 458 SPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGV 517
S S+E K++KVDRREAAL+KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK+ G
Sbjct: 467 SSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLKGA 526
Query: 518 NVDLNGQPSSV-DYDEDEDEEEEMASRDSSPDN 549
N DLNGQP+S+ ++DE++E++ +RDSSP++
Sbjct: 527 NADLNGQPASIDYDEDDEEDEDDQGARDSSPED 559
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/547 (68%), Positives = 443/547 (80%), Gaps = 43/547 (7%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCDND+ SS VF+LL+KCSYQVTSVRS RQVIDALNAEG +ID+IL+EV
Sbjct: 19 FVDRSKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEV 78
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
D+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDEVS+VVKCLRLGAADYLVKPLRTNELLN
Sbjct: 79 DIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLN 138
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTHMWRRR MLGLAEKNIL+YDFD VASDPSDANTNSTTLFSDDTDD SRRSTNPE+GM
Sbjct: 139 LWTHMWRRRHMLGLAEKNILNYDFDPVASDPSDANTNSTTLFSDDTDDLSRRSTNPEMGM 198
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRT----AGPKKIELRI 262
STHQE E P D + PDVPGISDRRT +GPKK EL+I
Sbjct: 199 STHQEDEP------------------SPGDPQKYRPDVPGISDRRTGHLSSGPKKSELKI 240
Query: 263 GESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWE 322
GESSAFFTYVK + +++S + ++D+ QN+RMEEK Q C +Q+++D + ENGEA E
Sbjct: 241 GESSAFFTYVKPSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLNDAHLQENGEALE 300
Query: 323 NYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMPPTRNEP----- 375
+SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q NEP
Sbjct: 301 IHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT----NEPQLDAS 355
Query: 376 ---PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQN---HSMLPQYNHLPQCVPHVNG 429
Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+ +MLP YNHLPQC PH++G
Sbjct: 356 SLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSLGTSAMLPGYNHLPQCPPHMSG 414
Query: 430 MASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFD 488
MASFPYYP+++CLQPGQ+ + SWPS+G+S S +VK+NKVDRREAAL KFRQKRKERCFD
Sbjct: 415 MASFPYYPVSICLQPGQMPTTPSWPSFGSSTSADVKLNKVDRREAALNKFRQKRKERCFD 474
Query: 489 KKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSV-DYDEDEDEEEEMASRDSSP 547
KKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP+S +++E++ +E ASRDSSP
Sbjct: 475 KKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQPASTDYDEDEEEDGDEQASRDSSP 534
Query: 548 DNDTSGN 554
++D SG+
Sbjct: 535 EDDASGS 541
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/528 (68%), Positives = 420/528 (79%), Gaps = 41/528 (7%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FIDRS VRILLCDND+ SSD +F+LL CSYQVTSVRS RQVIDALNAEG DID+ILAEV
Sbjct: 19 FIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEV 78
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLPMTKG+KMLKYI RDKEL+RIP+IMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN
Sbjct: 79 DLPMTKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 138
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTHMWRRRRMLGLAEKNIL+YDFD+ ASDPSDANTNS T+FSDDTDDKSR S NPE+ +
Sbjct: 139 LWTHMWRRRRMLGLAEKNILNYDFDVAASDPSDANTNS-TMFSDDTDDKSRMSANPEMVV 197
Query: 207 STHQETESVPVATATVVASTSGTAAVEP--IDASECGPDVPGISDRRT----AGPKKIEL 260
S HQE ES +T VA+ EP ++ EC PDVPGISDRRT +GPKK EL
Sbjct: 198 SVHQEDESNATIDSTDVAA-------EPPVVNQLECRPDVPGISDRRTGQLLSGPKKSEL 250
Query: 261 RIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEA 320
++GESSAFFTYVKS+M + +S I N+++SA Q+ RMEE+ Q ++ V+DT+ HENGEA
Sbjct: 251 KVGESSAFFTYVKSSMIKTNSQGIPNINESAPQHSRMEERVQAWSEKGVNDTQEHENGEA 310
Query: 321 WENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATY 380
WENYSQG+DF S E S P P+N + D F P Y
Sbjct: 311 WENYSQGDDFPSK---------EFSQVPI--HPRNEHQVDISGF----------PGHTAY 349
Query: 381 QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH----SMLPQYNHLPQCVPHVNGMASFPYY 436
Y MSG MNQVM+P SSAQ+Y K+LH++QN+ +MLPQYNHLPQC PHV G+ASFPYY
Sbjct: 350 PYCMSGVMNQVMMP-SSAQLYPKSLHDMQNNATTSAMLPQYNHLPQCPPHVPGVASFPYY 408
Query: 437 PINMCLQPGQVS-ANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVN 495
P+++CLQPGQ+S + WPSYGNS STEVK+ KVDRREAALIKFRQKRKERCFDKKIRYVN
Sbjct: 409 PVSICLQPGQMSTTHPWPSYGNSSSTEVKLGKVDRREAALIKFRQKRKERCFDKKIRYVN 468
Query: 496 RKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVDYDEDEDEEEEMASR 543
RKRLAERRPRVRGQFVRK+NGVNVDLNG+P+SVD+DEDE+E+ + S+
Sbjct: 469 RKRLAERRPRVRGQFVRKMNGVNVDLNGRPASVDFDEDEEEKADGFSK 516
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/574 (64%), Positives = 443/574 (77%), Gaps = 42/574 (7%)
Query: 1 MES-KEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQV 59
MES +E+NLN E G KS GDGFIDRSKVRILLCDNDS SS VF+LL++CSYQV
Sbjct: 1 MESGEEINLNIESGG------KSGGDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQV 54
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSV+S RQVIDALNAEG ID+ILAE+DLPM KG+KMLKYI RDKE +RIPVIMMSAQDE
Sbjct: 55 TSVKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDE 114
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSD 179
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGL EKNIL+YDFDLV SDPSD
Sbjct: 115 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVVSDPSD 174
Query: 180 ANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVE-PID-- 236
ANTNSTTLFSDDTDDKS+RSTNPE G+S QE ES + + AAVE P D
Sbjct: 175 ANTNSTTLFSDDTDDKSKRSTNPEAGISVQQEQES----------TIANAAAVEGPPDAH 224
Query: 237 ASECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAA 292
ASECGPDV G++D +TA GPKK ELRIGESSAFFTYVK+++ + + +VNVD++ A
Sbjct: 225 ASECGPDVDGVNDHQTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNVDNNGA 284
Query: 293 QNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT-- 350
+V ME Q C QQ V+ +I ENGEA E+ SQ +D SS+S+PDSLS+ERS TPP
Sbjct: 285 THVGMEVMHQACAQQGVNSLQILENGEACESQSQ-DDLPSSTSIPDSLSIERSCTPPASM 343
Query: 351 DFPQNRNFKDEKFFQPQMPP----------TRNEPPQATYQYYMSGAMNQVMLPSSSAQM 400
+ Q +++++E Q M P Q Y YY+SG +N VM+PSS+
Sbjct: 344 EVSQQKHYREENSQQGVMHPRNGTHCSEHEVSGMASQHAYPYYISGVVNHVMMPSSAQMY 403
Query: 401 YQKNLHELQNHS---MLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYG 456
+QKN+ +LQNH+ M+ QYNHLPQ PH GM SFPYYP+++CLQPGQ+ + +SW S+G
Sbjct: 404 HQKNIQDLQNHTSTAMISQYNHLPQGGPHGTGMTSFPYYPMSICLQPGQIPNPHSWQSFG 463
Query: 457 NSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNG 516
NS +E K++KVDRREAAL+KFRQKRKERCFDKKIRY+NRKRLAERRPRVRGQFVRK+NG
Sbjct: 464 NSSPSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYINRKRLAERRPRVRGQFVRKLNG 523
Query: 517 VNVDLNGQPSSV-DYDEDEDEEEEMASRDSSPDN 549
NVDLNG+P+S+ ++DE++E++ +RDSSP++
Sbjct: 524 ANVDLNGEPASIDYDEDDEEDEDDQGARDSSPED 557
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/562 (66%), Positives = 440/562 (78%), Gaps = 23/562 (4%)
Query: 2 ESKEM-NLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVT 60
E++E+ NLN + S G GN+ SGDGFIDRSKVRILLCDNDS SS+ VF+LL+ CSYQVT
Sbjct: 6 ETEELINLNDKSSNFG-GNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFALLLGCSYQVT 64
Query: 61 SVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEV 120
SVRS RQVIDALNAEG ID+ILAEVDLP+ KG+K+LKYI RDKEL RIPVIMMSAQDEV
Sbjct: 65 SVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEV 124
Query: 121 SVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDA 180
S+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGL E NIL+YDFDLVASDPSDA
Sbjct: 125 SIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILTYDFDLVASDPSDA 184
Query: 181 NTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASEC 240
NTNSTTLFSDDTDDKS+RSTNPE G+S QE E+ A VV SE
Sbjct: 185 NTNSTTLFSDDTDDKSKRSTNPETGVSIQQEQEASIATIAAVVVELPNAL------LSEY 238
Query: 241 GPDVPGISDRRT----AGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVR 296
PDVPGISDRRT +GPKK EL+IGESSAFFTYVK+ + + +VD++ VR
Sbjct: 239 QPDVPGISDRRTGHFLSGPKKSELKIGESSAFFTYVKATTLKRNVEESAHVDNTTTTEVR 298
Query: 297 MEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP--TDFPQ 354
+E+ Q C +Q +D + HEN E +EN+SQ +D SS+S+PDS S+ERS TPP T+ Q
Sbjct: 299 VEDMNQACTEQGGNDLKTHENEEMFENHSQ-DDLPSSNSIPDSFSIERSCTPPASTEVSQ 357
Query: 355 NRNFKDEK---FFQPQMPPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
+++K+E P+ + P Q Y YY+SG +N VM+P SSAQ+YQKN+ +LQ+H
Sbjct: 358 QKHYKEEHSQGVVHPRNGSHGSGPAQHAYPYYISGVVNHVMMP-SSAQLYQKNIQDLQSH 416
Query: 412 ---SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSANSWPSYGNSPSTEVKMNKV 468
SM+ QYNHLPQC PH NGM SFPYYP+++CLQPGQ+S NSWPS G+S S EVK++KV
Sbjct: 417 AGSSMIAQYNHLPQCPPHANGMTSFPYYPMSICLQPGQISTNSWPSLGSSSSCEVKISKV 476
Query: 469 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSV 528
DRREAAL+KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK+NG+NVDLNGQP+S
Sbjct: 477 DRREAALVKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGINVDLNGQPAST 536
Query: 529 -DYDEDEDEEEEMASRDSSPDN 549
++DE+EE+ +RDSSP++
Sbjct: 537 DYDEDDEEEEDNHGARDSSPED 558
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/567 (64%), Positives = 433/567 (76%), Gaps = 29/567 (5%)
Query: 2 ESKEM-NLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVT 60
E++E+ NLN S G GN+ SGDGFIDRSKVRILLCDNDS SS+ VF+LL+ CSYQV
Sbjct: 6 EAEELINLNNISSNCG-GNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLLGCSYQVI 64
Query: 61 SVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEV 120
SVRS RQVIDALNAEG ID+ILAEVDLP+ KG+K+LKYI RDKEL RIPVIMMSAQDEV
Sbjct: 65 SVRSARQVIDALNAEGQYIDMILAEVDLPIKKGMKLLKYIARDKELCRIPVIMMSAQDEV 124
Query: 121 SVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDA 180
S+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGL E NIL+YDFDLVASDPSDA
Sbjct: 125 SIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDLVASDPSDA 184
Query: 181 NTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASEC 240
NTNSTTLFSDDTDDKS+R TNPE G+ QE E+ A VV S+
Sbjct: 185 NTNSTTLFSDDTDDKSKRGTNPETGVLIQQEQEASIATIAAVVVELPSYL------VSQY 238
Query: 241 GPDVPGISDRRT----AGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDS------ 290
PDVPGISDRRT +GPKK EL+IGESSAFFTYVK+ + + +VD+S
Sbjct: 239 QPDVPGISDRRTGHFSSGPKKSELKIGESSAFFTYVKATTLKSNIEESAHVDNSNNTTTT 298
Query: 291 -AAQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP 349
VRME+ Q C +Q + + H+NGE + N+SQ +D SS+S+ DS S+ERS TPP
Sbjct: 299 TTTTEVRMEDMNQACIEQGDNGLKTHKNGEMFGNHSQ-DDLPSSNSILDSFSIERSCTPP 357
Query: 350 T--DFPQNRNFKDEK---FFQPQMPPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKN 404
+ Q +++K+E P+ + P Q Y YY+SG +N VM+P SSAQ+YQKN
Sbjct: 358 ASMEVSQQKHYKEEHSQGVVHPRNGSHGSVPAQHAYPYYISGVVNHVMMP-SSAQLYQKN 416
Query: 405 LHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSANSWPSYGNSPST 461
+ +LQ H SM+ QYNHLPQC PH NGM +FPYYP+N+CLQPGQ+S NSWPS G+S S
Sbjct: 417 IQDLQIHAGSSMIAQYNHLPQCPPHANGMTNFPYYPMNICLQPGQISTNSWPSLGSSSSC 476
Query: 462 EVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDL 521
EV+++KVDRREAAL+KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK+NG+NVDL
Sbjct: 477 EVQISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGINVDL 536
Query: 522 NGQPSSVDYDEDEDEEEEMASRDSSPD 548
NGQP+S DYDED++EE+ +RDSSP+
Sbjct: 537 NGQPASTDYDEDDEEEDNHRARDSSPE 563
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/580 (64%), Positives = 435/580 (75%), Gaps = 51/580 (8%)
Query: 1 MESKEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVT 60
M+ KE+NLN++C G G G K+ GDGFIDRSKVRILLCDNDS SS+ VF LL+KCSYQV
Sbjct: 1 MDCKELNLNEDCGGCGSG-GKNXGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVI 59
Query: 61 SVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEV 120
SV S RQVIDALNAEG +ID+IL+EVDLPM KG+KMLKYITRDKEL+RIPVIMMS QDEV
Sbjct: 60 SVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEV 119
Query: 121 SVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDA 180
+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR LGLAEKNIL+Y+FDLVASDPSDA
Sbjct: 120 PIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYEFDLVASDPSDA 179
Query: 181 NTNSTTLFSDDTDDKSRRSTNPEIGMS---THQETESVPVATATVVASTSGTAAVEP--I 235
NTNSTTLFSDDTDDKSRRSTNPE+G++ THQE E P AT+ VEP +
Sbjct: 180 NTNSTTLFSDDTDDKSRRSTNPEMGITAPATHQEDE--PGIAATI---------VEPPAV 228
Query: 236 DASECGPDVPGISDRRTAG----PKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSA 291
+ + PDVPGIS+RRT P+K EL+IGESSAFFTYVKS R + V+++DS
Sbjct: 229 HSVQHQPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKS---RTVKNKAVDIEDS- 284
Query: 292 AQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP-- 349
+ + +EE Q Q+ V I E GEA E++SQG++ SS+S PDS S+ERS TPP
Sbjct: 285 TKRLLLEENHQETSQRAVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAG 344
Query: 350 TDFPQNRNFKDEKFFQPQMPPTRN-----------EPPQATYQYYMSGAMNQVMLPSSSA 398
TD + RN +E Q + +RN + A Y +YM M SA
Sbjct: 345 TDVHRERNINEENCSQVLL-HSRNGSQLDISGLPVQTQTAAYPFYMPEGM-------MSA 396
Query: 399 QMYQKNLHELQNH-SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV----SANSWP 453
QMYQ NLHE+QNH +M+ QY H C P+V+G+AS+PYYP+N+CLQPGQ+ + +SWP
Sbjct: 397 QMYQNNLHEMQNHAAMMSQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPTTTNTHSWP 456
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GNS S E K NK DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK
Sbjct: 457 SLGNSSSNEAKSNKFDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 516
Query: 514 VNGVNVDLNGQPSSVDYDEDEDEEEEMASRDSSPDNDTSG 553
VNGVNVDLNGQP+S D EDEDEEEE+ SRDSS ++D SG
Sbjct: 517 VNGVNVDLNGQPASADDVEDEDEEEELLSRDSSHEDDGSG 556
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/575 (64%), Positives = 436/575 (75%), Gaps = 41/575 (7%)
Query: 1 MES-KEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQV 59
MES +E+NLN E G GN SGDGFIDRSKVRILLCDNDSNSS VF+LL+ CSYQV
Sbjct: 1 MESGEEINLNIESGG---GNHGKSGDGFIDRSKVRILLCDNDSNSSQEVFTLLLGCSYQV 57
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
T V+SPRQVIDALNAEG I +ILAE+DLP KG+KMLKYI RDKE +RIPVIMMSAQDE
Sbjct: 58 TLVKSPRQVIDALNAEGQHIGIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDE 117
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSD 179
VSVVVKCLRLGAADYLVKPLRTNELLNLW HMW RRRMLGL EKNILSY+FD+VASDPSD
Sbjct: 118 VSVVVKCLRLGAADYLVKPLRTNELLNLWMHMWGRRRMLGLVEKNILSYEFDIVASDPSD 177
Query: 180 ANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPID--A 237
ANTNSTTLFSDDTDDKS+RS NPE+G+ QE ES + G A VEP+D A
Sbjct: 178 ANTNSTTLFSDDTDDKSKRSNNPEVGLPVQQEQES---------SIAIGAAVVEPLDAHA 228
Query: 238 SECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQ 293
SE PDV G +D RTA GPKK ELRIGESSAFFT VK+++ + + +VNVD++ A
Sbjct: 229 SEHRPDVDGFNDHRTAHFSSGPKKSELRIGESSAFFTCVKASILKSNFEGVVNVDNNGAA 288
Query: 294 NVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDF- 352
+VRME Q C QQ V+D + ENGE E+ SQ +D S SSVPDSLS+ERS TPP
Sbjct: 289 HVRMEAMHQACAQQGVNDLQTRENGETCESQSQ-DDLPSCSSVPDSLSIERSCTPPASME 347
Query: 353 --PQNRNFKDEKFFQPQMPP----------TRNEPPQATYQYYMSGAMNQVMLPSSSAQM 400
PQ KD+ F Q M P Q TY YY+SG N VM+PSS+
Sbjct: 348 VSPQKH--KDKNFHQGVMHPRNGTHCSEHEVSGMASQHTYPYYISGGFNHVMMPSSAQMY 405
Query: 401 YQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYG 456
+QKN+ +LQNH +M+ QY+HLPQ PH GMASFPYYP+++CLQPGQV +SWPS+G
Sbjct: 406 HQKNMQDLQNHHSAAMIAQYSHLPQGGPHGTGMASFPYYPMSICLQPGQVPQPHSWPSFG 465
Query: 457 NSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNG 516
+S S+E K++KVDRREAAL+KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK+NG
Sbjct: 466 SSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNG 525
Query: 517 VNVDLNGQPSSV--DYDEDEDEEEEMASRDSSPDN 549
N+DLNGQP+S+ D D+DE++E++ +RDSSP++
Sbjct: 526 ANMDLNGQPASIDYDEDDDEEDEDDQGARDSSPED 560
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/580 (64%), Positives = 435/580 (75%), Gaps = 51/580 (8%)
Query: 1 MESKEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVT 60
M+ KE+NLN++C G G K+ GDGFIDRSKVRILLCDNDS SS+ VF LL+KCSYQV
Sbjct: 1 MDCKELNLNEDCGGCG-SGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVI 59
Query: 61 SVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEV 120
SV S RQVIDALNAEG +ID+IL+EVDLPM KG+KMLKYITRDKEL+RIPVIMMS QDEV
Sbjct: 60 SVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEV 119
Query: 121 SVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDA 180
+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR LGLAEKNIL+Y+FDLVASDPSDA
Sbjct: 120 PIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRTLGLAEKNILNYEFDLVASDPSDA 179
Query: 181 NTNSTTLFSDDTDDKSRRSTNPEIGMS---THQETESVPVATATVVASTSGTAAVEP--I 235
NTNSTTLFSDDTDDKSRRSTNPE+G++ THQE E P AT+ VEP +
Sbjct: 180 NTNSTTLFSDDTDDKSRRSTNPEMGITAPATHQEDE--PGIAATI---------VEPPAV 228
Query: 236 DASECGPDVPGISDRRT----AGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSA 291
+ + PDVPGIS+RRT + P+K EL+IGESSAFFTYVKS R + V+++DS
Sbjct: 229 HSVQHQPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKS---RTVKNKAVDIEDS- 284
Query: 292 AQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP-- 349
+ + +EE Q Q+ V I E GEA E++SQG++ SS+S PDS S+ERS TPP
Sbjct: 285 TKRLLLEENHQETSQRAVRLPPIQEIGEALESHSQGDEHPSSTSFPDSFSVERSCTPPAG 344
Query: 350 TDFPQNRNFKDEKFFQPQMPPTRN-----------EPPQATYQYYMSGAMNQVMLPSSSA 398
TD + RN +E Q + +RN + A Y +YM M SA
Sbjct: 345 TDVHRERNINEENCSQVLL-HSRNGSQLDISGLPVQTQTAAYPFYMPEGM-------MSA 396
Query: 399 QMYQKNLHELQNH-SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV----SANSWP 453
Q+YQ NLHE+QNH +M+ QY H C P+V+G+AS+PYYP+N+CLQPGQ+ + +SWP
Sbjct: 397 QIYQNNLHEMQNHAAMMSQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPTTTNTHSWP 456
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GNS S E K NK DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK
Sbjct: 457 SLGNSSSNEAKSNKFDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 516
Query: 514 VNGVNVDLNGQPSSVDYDEDEDEEEEMASRDSSPDNDTSG 553
VNGVNVDLNGQP+S D EDEDEEEE+ SRDSS ++D SG
Sbjct: 517 VNGVNVDLNGQPASADDVEDEDEEEELLSRDSSHEDDGSG 556
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/526 (64%), Positives = 400/526 (76%), Gaps = 29/526 (5%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
SG+GFIDRSKVRILLCD D+ SS VF+LL KCSYQVTS RSPRQVIDALNAEG +ID+I
Sbjct: 9 SGEGFIDRSKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDII 68
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
L+EVDLPM+KG KMLKYI RDKEL+RIPVIMMSAQDEVS+VVKCL+ GAADYLVKPLRTN
Sbjct: 69 LSEVDLPMSKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTN 128
Query: 143 ELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNP 202
ELLNLWTHMWRRR+MLGLAEKNILSYDFDLV SDPSD NTNSTTLFSDDTDD+SR+S N
Sbjct: 129 ELLNLWTHMWRRRQMLGLAEKNILSYDFDLVVSDPSDPNTNSTTLFSDDTDDRSRKSVNL 188
Query: 203 EIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAG----PKKI 258
E S QE E +A+ A+ T V P SEC DVPG ++R+T PKK
Sbjct: 189 EACPSIQQEDE----VSASTTAAHIETTHVFP---SECQSDVPGTNERQTGHISLFPKKS 241
Query: 259 ELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENG 318
EL+IG SSAFFTYVKS + + + ++ Q +R+EEK + +T++ N
Sbjct: 242 ELKIGGSSAFFTYVKSGVLKTNEQGTTCTHENVPQ-LRIEEKSNAVDGNLEIETQMQVNE 300
Query: 319 EAWENYSQGEDFRSSSSVPDSLSMERSSTPP--TDFPQNRNFKDEKFFQPQMPPTRNEP- 375
+A EN+SQG+D+RSS+S P+S SM+RS TPP + + RN K E+F Q M P RNE
Sbjct: 301 DAVENHSQGDDYRSSNSFPESYSMKRSCTPPLSLELTRQRNSKMEEFSQVYMHP-RNEAQ 359
Query: 376 -------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVP 425
Q Y Y++SGAMNQVM+P S +YQKNL +L NH ++LPQYNH+P C P
Sbjct: 360 RDAVSFHAQTAYSYFVSGAMNQVMMP--SPHIYQKNLQDLHNHANSAVLPQYNHMPPCPP 417
Query: 426 HVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKE 484
H++GMASFPYYP+ +CLQPGQ+ + + WP+ GNSPS E K + VDRR AAL+KFRQKRKE
Sbjct: 418 HMHGMASFPYYPMGLCLQPGQMPTPHQWPTIGNSPSAEGKGSIVDRRTAALMKFRQKRKE 477
Query: 485 RCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVDY 530
RCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNG P+S DY
Sbjct: 478 RCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGHPASADY 523
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/526 (63%), Positives = 390/526 (74%), Gaps = 31/526 (5%)
Query: 15 AGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNA 74
G N++ S D FIDRSKVRILLCDNDS S + VF LL CSYQVT+VRS RQVIDALNA
Sbjct: 12 GGPSNARGS-DPFIDRSKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNA 70
Query: 75 EGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
EG DID+IL+EVDLP KGLKMLKYI RD++LQRIPVIMMS QDEVS+VVKCLRLGAADY
Sbjct: 71 EGPDIDIILSEVDLPTKKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADY 130
Query: 135 LVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDD 194
LVKPLRTNE+LNLWTHMWRRR+MLGLAEKNI++YDFDL ASD SDANTNSTTLFSDDTDD
Sbjct: 131 LVKPLRTNEMLNLWTHMWRRRQMLGLAEKNIVNYDFDLAASDHSDANTNSTTLFSDDTDD 190
Query: 195 KSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAG 254
+SRR N E+ M+ +E E S T+ P D +C PDVPGI DRRT
Sbjct: 191 RSRRGVNLEMSMTIQEEDE-----------SNKATSDPMPADLFDCRPDVPGICDRRTGQ 239
Query: 255 ----PKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVS 310
KK EL+IGE SAFFTYVKS+ +++ + +V+ + AQ R+E+K + + V +
Sbjct: 240 FVPFAKKSELKIGECSAFFTYVKSSAVKNNC-QAADVEVNHAQPSRLEDKSERLNEVVNN 298
Query: 311 DTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT-DFPQNRNFKDEKFFQPQMP 369
ENGE WEN S EDFRSS+SVPDS SMERS TP + DF N++ DE Q M
Sbjct: 299 GNMRCENGETWENNSN-EDFRSSTSVPDSTSMERSCTPVSLDFMPNKSM-DEGLSQVHM- 355
Query: 370 PTRNEP-------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHSMLPQYNHLPQ 422
+RN + Y YYMSG MNQVM+ SSSA MY+K+L E +++P YNHL
Sbjct: 356 NSRNGAHFDVSGLAHSAYPYYMSGMMNQVMM-SSSAHMYRKDLQEHGTSAVMPHYNHLSH 414
Query: 423 CVPHVNGMA-SFPYYPINMCLQPGQVSAN-SWPSYGNSPSTEVKMNKVDRREAALIKFRQ 480
C PHV GMA + YYP+N+C+Q GQ+ +N PS+GNS S+EVK+ +VDRREAALIKFRQ
Sbjct: 415 CPPHVPGMAPPYTYYPLNLCIQQGQLPSNHQMPSFGNSSSSEVKLREVDRREAALIKFRQ 474
Query: 481 KRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPS 526
KRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGV VDLNG PS
Sbjct: 475 KRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVTVDLNGDPS 520
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/583 (55%), Positives = 398/583 (68%), Gaps = 81/583 (13%)
Query: 21 KSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
KS G+GFIDRSKVRILLCDND SS V+ LL KCSYQVT VRSPRQVIDALN EG DID
Sbjct: 8 KSGGEGFIDRSKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDID 67
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
+IL+EVDLPM KG KMLKYI RDK+L+RIPVIMMSAQDEV+VVVKCLRLGAADYLVKPLR
Sbjct: 68 IILSEVDLPMAKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLR 127
Query: 141 TNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFS-DDTDDKSRRS 199
TNELLNLWTHMWRRRRMLGLAEKNIL+ +FD + SD SDANTNSTTLFS DDT++KSRRS
Sbjct: 128 TNELLNLWTHMWRRRRMLGLAEKNILNCEFDPMHSDHSDANTNSTTLFSEDDTEEKSRRS 187
Query: 200 TNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRT------- 252
+NPEI +S +E ES V G + ++ S+ P+VP I+++R
Sbjct: 188 SNPEISLSIPREVES-------NVNIAPGLVNTQFVNLSDDTPNVPEINEQRAVYPGKLM 240
Query: 253 AGPKKIELRIGESSAFFTYVKSNM----------------------------PRDSSPRI 284
GPKK ELRIG+SSAFFTYVKS+M R S I
Sbjct: 241 VGPKKSELRIGQSSAFFTYVKSSMFASTTLGGDITIEEAPPPQLDSKLSLGGERVDSITI 300
Query: 285 VNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQG-EDFRSSSSVPDSLSME 343
+++A Q V +EEK + VSDT++ ++ + G E F +++S PDS+S++
Sbjct: 301 NLTNENATQYVHLEEKISTWGEH-VSDTQV-------DDCTPGPEKFHNNNSFPDSMSLD 352
Query: 344 RSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEP------PQATYQYYMSGAMNQVMLPSSS 397
SSTPP+ P+ + K + Q + P P + Y YY+ G MN VM+ S S
Sbjct: 353 TSSTPPSQ-PEYSPQMNSKISETQQSGNNHHPDVSGFNPYSAYPYYLPGPMNHVMM-SPS 410
Query: 398 AQMYQKNLHELQNHSMLPQYNHLPQCVP-HVNGMASFPYYPINMCLQPGQV--SANSWPS 454
+ MYQ+N+ ++P C P H+ GM SFPYYP+N+CL PGQ+ + WP
Sbjct: 411 SSMYQQNM-------------NVPHCPPHHMPGMTSFPYYPVNLCL-PGQMPPGMHPWPP 456
Query: 455 YGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
YG S S V + K+DRREAAL+KFRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRK+
Sbjct: 457 YGGSSSNNVNVPKLDRREAALLKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKI 516
Query: 515 NGVNVDLNGQPSSVDYDEDEDEEEE---MASRD-SSPDNDTSG 553
NG+NVDLNGQP+S D+DED+D++EE A RD SSP+N+ +
Sbjct: 517 NGINVDLNGQPTSNDFDEDDDDDEEEEYQAGRDSSSPENNYAA 559
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 331/644 (51%), Positives = 395/644 (61%), Gaps = 123/644 (19%)
Query: 6 MNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSP 65
M+LN EC G GDGFIDRS+VRILLCDNDS S VF+LL +CSYQVT+V+S
Sbjct: 1 MDLNGECKG---------GDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSA 51
Query: 66 RQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVK 125
RQVIDALNAEG DID+ILAE+DLPM KG+KML+YITRDK+L+RIPVIMMS QDEV VVVK
Sbjct: 52 RQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVK 111
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNST 185
CL+LGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+LSYDFDLV SD SD NTNST
Sbjct: 112 CLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNST 171
Query: 186 TLFSDDTDDKSRRSTNPEIGMSTHQETE----SVPV--------ATATVVASTSGTAAVE 233
LFSDDTDD+S RSTNP+ G +HQE E + PV A T +S + TA
Sbjct: 172 NLFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEP 231
Query: 234 PIDASECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSS-------- 281
P+D P + A PKK L+IGESSAFFTYVKS + R +
Sbjct: 232 PLDHLAGSHHEPMKRNSNPAQFSSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDG 291
Query: 282 --------------------------------------------PRIVNVDDSAAQNVRM 297
P +VN + S +
Sbjct: 292 NGSLHLHRGLAEKFQVVASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGA 351
Query: 298 EEKCQPCCQQVVSDTRIHENGEAWENY-SQGEDFRSSSSVPDSLSMERSSTPPTDF-PQN 355
EK Q + +++T+ E Y SQGE ++ +S P SL ERS T PT
Sbjct: 352 AEKFQVVASEGINNTKQAHRSRGTEQYHSQGETLQNGASYPHSL--ERSRTLPTSMESHG 409
Query: 356 RNFKDEKFFQPQMPPTRNE-----------PPQATYQYYMSGAMNQVMLPSSSAQMYQKN 404
RN+++ PQ+ R++ P A Y YYM G MNQVM+ S+
Sbjct: 410 RNYQEGNMNIPQVAMNRSKDSSQVDGSGFSAPNA-YPYYMHGVMNQVMMQSA-------- 460
Query: 405 LHELQNHSMLPQYNH-LPQCVP-HVNGMASFPYY--PIN-------MCLQPGQVSA--NS 451
+M+PQY H +P C P H NGM +PYY P+N M LQ GQ+S +S
Sbjct: 461 -------AMMPQYGHQIPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHS 513
Query: 452 WPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
W GN PS EV++NK+DRRE AL+KFR+KR +RCFDKKIRYVNRKRLAERRPRV+GQFV
Sbjct: 514 WSPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV 573
Query: 512 RKVNGVNVDLNGQPSSVDYDE--DEDEEEEMASRDSSPDNDTSG 553
RK+NGVNVDLNGQP S DYD+ +E+EEEE +RDSSP +D G
Sbjct: 574 RKMNGVNVDLNGQPDSADYDDEEEEEEEEEEENRDSSPQDDALG 617
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/644 (51%), Positives = 394/644 (61%), Gaps = 123/644 (19%)
Query: 6 MNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSP 65
M+LN EC G GDGFIDRS+VRILLCDNDS S VF+LL +CSYQVT+V+S
Sbjct: 1 MDLNGECKG---------GDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSA 51
Query: 66 RQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVK 125
RQVIDALNAEG DID+ILAE+DLPM KG+KML+YITRDK+L+RIPVIMMS QDEV VVVK
Sbjct: 52 RQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVK 111
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNST 185
CL+LGAADYLVKPL TNELLNLWTHMWRRRRMLGLAEKN+LSYDFDLV SD SD NTNST
Sbjct: 112 CLKLGAADYLVKPLLTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNST 171
Query: 186 TLFSDDTDDKSRRSTNPEIGMSTHQETE----SVPV--------ATATVVASTSGTAAVE 233
LFSDDTDD+S RSTNP+ G +HQE E + PV A T +S + TA
Sbjct: 172 NLFSDDTDDRSLRSTNPQRGNLSHQENEWSVATAPVHARDGGLGADGTATSSLAVTAIEP 231
Query: 234 PIDASECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSS-------- 281
P+D P + A PKK L+IGESSAFFTYVKS + R +
Sbjct: 232 PLDHLAGSHHEPMKRNSNPAQFSSAPKKSRLKIGESSAFFTYVKSTVLRTNGQDPPLVDG 291
Query: 282 --------------------------------------------PRIVNVDDSAAQNVRM 297
P +VN + S +
Sbjct: 292 NGSLHLHRGLAEKFQVVASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNGSHHLHRGA 351
Query: 298 EEKCQPCCQQVVSDTRIHENGEAWENY-SQGEDFRSSSSVPDSLSMERSSTPPTDF-PQN 355
EK Q + +++T+ E Y SQGE ++ +S P SL ERS T PT
Sbjct: 352 AEKFQVVASEGINNTKQAHRSRGTEQYHSQGETLQNGASYPHSL--ERSRTLPTSMESHG 409
Query: 356 RNFKDEKFFQPQMPPTRNE-----------PPQATYQYYMSGAMNQVMLPSSSAQMYQKN 404
RN+++ PQ+ R++ P A Y YYM G MNQVM+ S+
Sbjct: 410 RNYQEGNMNIPQVAMNRSKDSSQVDGSGFSAPNA-YPYYMHGVMNQVMMQSA-------- 460
Query: 405 LHELQNHSMLPQYNH-LPQCVP-HVNGMASFPYY--PIN-------MCLQPGQVSA--NS 451
+M+PQY H +P C P H NGM +PYY P+N M LQ GQ+S +S
Sbjct: 461 -------AMMPQYGHQIPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHS 513
Query: 452 WPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
W GN PS EV++NK+DRRE AL+KFR+KR +RCFDKKIRYVNRKRLAERRPRV+GQFV
Sbjct: 514 WSPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV 573
Query: 512 RKVNGVNVDLNGQPSSVDYDE--DEDEEEEMASRDSSPDNDTSG 553
RK+NGVNVDLNGQP S DYD+ +E+EEEE +RDSSP +D G
Sbjct: 574 RKMNGVNVDLNGQPDSADYDDEEEEEEEEEEENRDSSPQDDALG 617
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/645 (50%), Positives = 395/645 (61%), Gaps = 120/645 (18%)
Query: 6 MNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSP 65
M+LN EC G GDGFIDRS+VRILLCDNDS S VF+LL +CSYQVTSV+S
Sbjct: 1 MDLNGECKG---------GDGFIDRSRVRILLCDNDSKSLGEVFTLLSECSYQVTSVKSA 51
Query: 66 RQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVK 125
RQVIDALNAEG DID+ILAE+DLPM KG+KML+YITRDK+L+RIPVIMMS QDEV VVVK
Sbjct: 52 RQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVK 111
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNST 185
CL+LGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+LSYDFDLV SDPSD NTNST
Sbjct: 112 CLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNST 171
Query: 186 TLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATA-------------TVVASTSGTAAV 232
LFSDDTD++S RSTN + G +HQE E VATA T + + TA
Sbjct: 172 NLFSDDTDERSLRSTNLQRGNLSHQENE-WSVATAPVHAGDGGLGADGTATSFLAVTAIE 230
Query: 233 EPIDASECGPDVPGISDRRTA----GPKKIELRIGESSAFFTYVKSNMPRDSSPR--IVN 286
P+D P + A PKK L+IGESSAFFTYVKS + R + +VN
Sbjct: 231 PPLDHLAGSHHEPMKRNSNPAQFSSAPKKSRLKIGESSAFFTYVKSTVRRTNGQDLPLVN 290
Query: 287 VDDSAAQNVRMEEKCQPCCQQVVSDTR-----------IHENG----------------- 318
+ S + + EK Q + +++T+ NG
Sbjct: 291 GNGSLHLHRGLAEKFQAVASEGINNTKQACGTTPKSTVFRNNGQDAPLVNGYGSLHLHRG 350
Query: 319 -----------------------EAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDF-PQ 354
E + +SQGE+ ++ ++ SL ERS T PT
Sbjct: 351 LAEKFQAVASKGINNSKQARGSRETEKYHSQGENLQNGANYQHSL--ERSRTLPTSMESH 408
Query: 355 NRNFKDEKFFQPQMPPTRNE-----------PPQATYQYYMSGAMNQVMLPSSSAQMYQK 403
RN+++ PQ+ R++ P A Y YYM G MNQVM+ S+A M K
Sbjct: 409 GRNYQEGNMNTPQVAMNRSKDSSQVDGLSFSAPNA-YPYYMHGVMNQVMM-QSAAMMPTK 466
Query: 404 NLHELQNHSMLPQYNHLPQCVP-HVNGMASFPYY--PIN-------MCLQPGQVSA--NS 451
+ P + LP C P H NGM +PYY P+N M LQ GQ+S +S
Sbjct: 467 S---------SPWGHQLPHCQPNHPNGMTGYPYYHHPMNTSLQHSQMSLQNGQMSMVHHS 517
Query: 452 WPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
W GN PS EV++NK+DRRE AL+KFR+KR +RCFDKKIRYVNRKRLAERRPRV+GQFV
Sbjct: 518 WSPVGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFV 577
Query: 512 RKVNGVNVDLNGQPSSVDYDE---DEDEEEEMASRDSSPDNDTSG 553
RK+NGVNVDLNGQP S DYD+ +E+EEEE + +SSP +D G
Sbjct: 578 RKMNGVNVDLNGQPDSADYDDEEEEEEEEEEEENHNSSPQDDALG 622
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 320/611 (52%), Positives = 388/611 (63%), Gaps = 99/611 (16%)
Query: 6 MNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSP 65
M+LN EC GDGFIDRS+VRILLCDND NS VF+LL +CSYQVTSV+S
Sbjct: 1 MDLNGECK-------GGGGDGFIDRSRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSA 53
Query: 66 RQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVK 125
RQVIDALNAEG DID+ILAE+DLPM KG+KML+YITRDK+L+RIPVIMMS QDEV VVVK
Sbjct: 54 RQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVK 113
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNST 185
CL+LGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+LSY+FDLV SDPSD NTNST
Sbjct: 114 CLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYEFDLVGSDPSDPNTNST 173
Query: 186 TLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVA---STSGTAAVEPIDASECGP 242
LFSDDTD++S RSTNP+ G +HQE E PV T +V A + GTA P A P
Sbjct: 174 NLFSDDTDERSIRSTNPQRG--SHQEKE-WPVPTGSVCAGDGAADGTATSTPPVAIIEPP 230
Query: 243 --DVPGISDRRT----------AGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDS 290
+P T + PKK L+IGESSAFFTYVKS V+ +
Sbjct: 231 LNHLPEPHHEPTKRNTNPAQFSSVPKKSRLKIGESSAFFTYVKS-----------TVNGN 279
Query: 291 AAQNVRMEEKCQPCCQQVVSDTRIHENG-EAWENYSQGEDF------------------- 330
+ + M EK Q +V+++ + G E +N +QGE+
Sbjct: 280 GSVHPGMAEKLQAVASEVINNAKQTRGGRETEKNKAQGENLVNGTLERSRTLPTPMELHG 339
Query: 331 -RSSSSVPDSLSMERSSTPPTDFPQNRN-FKDEKFFQPQMPPTRNE---PPQATYQYYMS 385
RS VP+S+ R+ PP + R+ +++ ++ ++ P Q Y YYM
Sbjct: 340 SRSYQEVPNSIERSRTLPPPMELHGTRSCYQEGSMDDARVAAAKDSSQFPAQNAYPYYMH 399
Query: 386 GAMNQVMLPSSSAQMYQKNLHELQNHSMLPQYNH--LPQCVP-HVNGMASFPYY----PI 438
G MNQVM +Q+ +M+PQY H P C P H+NGM FPYY +
Sbjct: 400 GVMNQVM---------------MQSAAMMPQYGHHQHPHCPPNHLNGMTGFPYYHHHHQM 444
Query: 439 NMCLQPGQV------------SANSWPSYGNSPS-TEVKMNKVDRREAALIKFRQKRKER 485
N LQ G V +SWP GN PS EV++ K+DRRE AL+KFR+KR +R
Sbjct: 445 NTSLQNGHVPLQNGQMPPMVHHHHSWPQVGNHPSPNEVRVTKLDRREEALLKFRRKRNQR 504
Query: 486 CFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPS--SVDY-DEDEDEEEEMAS 542
CFDKKIRYVNRK+LAERRPRV+GQFVRK+NGVNVDLNGQP S DY DE+E++EEE +
Sbjct: 505 CFDKKIRYVNRKKLAERRPRVKGQFVRKMNGVNVDLNGQPEPDSADYDDEEEEDEEEEEN 564
Query: 543 RDSSPDNDTSG 553
RDSSP +D G
Sbjct: 565 RDSSPQDDALG 575
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 300/563 (53%), Positives = 372/563 (66%), Gaps = 70/563 (12%)
Query: 6 MNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSP 65
M+LN EC G GDGFIDRS+VRILLCDNDS S VF+LL +CSYQVTSV+S
Sbjct: 1 MDLNGECKG---------GDGFIDRSRVRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSA 51
Query: 66 RQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVK 125
RQVIDALNAEG DID+ILAE+DLPM KG+KML+YITRDK+L+RIPVIMMS QDEV VVVK
Sbjct: 52 RQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVK 111
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNST 185
CL+LGAADYLVKPLRTNELLNLWT+MWRRRRMLGLAEKN+LSYDFDLV SDPSD NTNST
Sbjct: 112 CLKLGAADYLVKPLRTNELLNLWTYMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNST 171
Query: 186 TLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVP 245
LFSDDTDD+S RSTNP G + QE E P AT +V + T+A P++ P
Sbjct: 172 NLFSDDTDDRSIRSTNPLRGPLSRQEKE-CPAATGSV--DGTATSAPPPLNHLPGSHHEP 228
Query: 246 GISDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVR---MEEKCQ 302
++ ++ PKK L+IGESSAFFTYVKS + +V+ + + ++ + EK Q
Sbjct: 229 N-PEKFSSVPKKSRLKIGESSAFFTYVKSTALATNCQDPPHVNGNGSLHLHPGVVAEKLQ 287
Query: 303 PCCQQVVSDTR-IHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDE 361
+V++ + H + E +N G T+ R++++
Sbjct: 288 VVASEVINKPKQTHRSRETEKNLQNGG--------------------ATEELHGRSYQER 327
Query: 362 KFFQPQMPPTRN-EPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHSMLPQYNH- 419
Q+ R+ + Q Y YYM G MNQVM+ S+ +M+PQY H
Sbjct: 328 N----QVAVNRSKDSSQVAYPYYMQGVMNQVMMQSA---------------AMMPQYGHH 368
Query: 420 -LPQCVP-HVNGMASFPYY---PINMCLQPGQVSANSWPS--YGNSPSTEVKMNKVDRRE 472
P P H+NGM PYY P+N LQ Q+S N S + + S EV+ +K+DRRE
Sbjct: 369 QHPHYPPNHLNGMTGVPYYHHHPMNTPLQHNQMSQNGQMSMVHYHPSSNEVRASKLDRRE 428
Query: 473 AALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVDY-- 530
AL+KFR+KR +RCFDKKIRYVNRK+LAERRPRV+GQFVRK+NGVNVDLNGQP DY
Sbjct: 429 EALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRVKGQFVRKMNGVNVDLNGQP---DYDD 485
Query: 531 DEDEDEEEEMASRDSSPDNDTSG 553
+E+E++EEE +RDSSP +D G
Sbjct: 486 EEEEEDEEEEENRDSSPQDDAQG 508
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 246/507 (48%), Positives = 306/507 (60%), Gaps = 43/507 (8%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD D+ SS V LL CSY VT +SPRQVI+ LN EG +ID+ILAEV
Sbjct: 28 FVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEV 87
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+K+L+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLRTNELLN
Sbjct: 88 DLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLN 147
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGL EKN +F+LV S+PSDANTNSTTL SD+TDD+ + + N E G
Sbjct: 148 LWTHVWRRRRMLGLPEKNFFHDNFELVLSEPSDANTNSTTLLSDETDDRPKENMNQETGT 207
Query: 207 STHQETESVP-VATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGES 265
S E ES P VA G +DAS+ PG R + P K LRI ES
Sbjct: 208 SNQLEYESNPSVAEPDQRDKMEGVPG-SVVDASQASS--PG---RMFSRPIKTNLRIAES 261
Query: 266 SAFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQ--VVSDTRIHENGEAWE 322
SAF YVK++ P SS + S ++ + C + V+D I N EA+E
Sbjct: 262 SAFLAYVKTSTPTTSSLDSELQRGGSQLDSLDNQGNCSSATDRSDTVTDVNI-RNKEAFE 320
Query: 323 NYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQY 382
Q SSS + MERS+ D T PP + +
Sbjct: 321 MPVQYPMVCFSSS---NTHMERSNEGHND-------------------TSGTPPVYHFPF 358
Query: 383 YMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQC--VPHVNGMASFPYYP 437
Y G + M SS Q +Q N++ Q H +MLPQYN PQC +P + +SF + P
Sbjct: 359 YYPGMVEHNM-AVSSVQNFQANINNAQAHTPPTMLPQYNVYPQCHGLPMI---SSFQFNP 414
Query: 438 INMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNR 496
M + + + N W S ++P E N+ +RR AAL KFRQKRKERCFDKK+RYVNR
Sbjct: 415 AGMNMHSSHLPTQNVWSSASSTPMPEETCNRSERRAAALAKFRQKRKERCFDKKVRYVNR 474
Query: 497 KRLAERRPRVRGQFVRKVNGVNVDLNG 523
K+LAE RPRVRGQFVR+ + ++ G
Sbjct: 475 KKLAETRPRVRGQFVRQASNTDITSTG 501
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 301/513 (58%), Gaps = 55/513 (10%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN E +ID+ILAEV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGL+EKN + +F+L S+PSDANTNSTTL SDDTDDK + + N E
Sbjct: 142 LWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETST 201
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPD---VPGISDRRTAGPKKIELRIG 263
S E ES P A E + S G D PG+ R P K LRI
Sbjct: 202 SNQHEYESNPSD-----AEPKQKGTPEGLLVSTEGGDQASSPGVMFSR---PIKTNLRIA 253
Query: 264 ESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWEN 323
ESSAF YVKS+ P SS D+ + + G ++
Sbjct: 254 ESSAFLAYVKSSTPTTSS----------------------------FDSELQKGGNRLDS 285
Query: 324 YSQGEDFRSSSSVPDS-----LSMERSSTPPTDFP----QNRNFKDEKFFQPQMPPTRNE 374
+F S++ D+ + + + P +P + N E+ + Q +
Sbjct: 286 SDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVCFSSSNLHLERSNEGQNDAS-GT 344
Query: 375 PPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMA 431
PP + +Y G M+ M Q +Q N++ Q H ++LPQYN PQC V+ M
Sbjct: 345 PPVYHFPFYYPGMMDHGMT-HPPVQNFQGNINNAQVHTPQTLLPQYNIYPQC-HGVSMMP 402
Query: 432 SFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKK 490
F Y P M +Q Q+ + N WP ++P E ++ +RR AAL KFR KRKERCFDKK
Sbjct: 403 PFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKFRLKRKERCFDKK 462
Query: 491 IRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNG 523
+RYVNRK+LAE RPRVRGQFVR+ N ++ G
Sbjct: 463 VRYVNRKKLAETRPRVRGQFVRQANYTDITSTG 495
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 301/513 (58%), Gaps = 55/513 (10%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN E +ID+ILAEV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGL+EKN + +F+L S+PSDANTNSTTL SDDTDDK + + N E
Sbjct: 142 LWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETST 201
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPD---VPGISDRRTAGPKKIELRIG 263
S E ES P A E + S G D PG+ R P K LR+
Sbjct: 202 SNQHEYESNPSD-----AEPKQKGTPEGLLVSTEGGDQASSPGVMFSR---PIKTNLRVA 253
Query: 264 ESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWEN 323
ESSAF YVKS+ P SS D+ + + G ++
Sbjct: 254 ESSAFLAYVKSSTPTTSS----------------------------FDSELQKGGNRLDS 285
Query: 324 YSQGEDFRSSSSVPDS-----LSMERSSTPPTDFP----QNRNFKDEKFFQPQMPPTRNE 374
+F S++ D+ + + + P +P + N E+ + Q +
Sbjct: 286 SDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVCFSSSNLHLERSNEGQNDAS-GT 344
Query: 375 PPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMA 431
PP + +Y G M+ M Q +Q N++ Q H ++LPQYN PQC V+ M
Sbjct: 345 PPVYHFPFYYPGMMDHGMT-HPPVQNFQGNINNAQVHTPQTLLPQYNVYPQC-HGVSMMP 402
Query: 432 SFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKK 490
F Y P M +Q Q+ + N WP ++P E ++ +RR AAL KFR KRKERCFDKK
Sbjct: 403 PFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKFRLKRKERCFDKK 462
Query: 491 IRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNG 523
+RYVNRK+LAE RPRVRGQFVR+ N ++ G
Sbjct: 463 VRYVNRKKLAETRPRVRGQFVRQANYTDITSTG 495
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 301/513 (58%), Gaps = 55/513 (10%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN E +ID+ILAEV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGL+EKN + +F+L S+PSDANTNSTTL SDDTDDK + + N E
Sbjct: 142 LWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETST 201
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPD---VPGISDRRTAGPKKIELRIG 263
S E ES P A E + S G D PG+ R P K LR+
Sbjct: 202 SNQHEYESNPSD-----AEPKQKGTPEGLLVSTEGGDQASSPGVMFSR---PIKTNLRVA 253
Query: 264 ESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWEN 323
ESSAF YVKS+ P SS D+ + + G ++
Sbjct: 254 ESSAFLAYVKSSTPTTSS----------------------------FDSELQKGGNRLDS 285
Query: 324 YSQGEDFRSSSSVPDS-----LSMERSSTPPTDFP----QNRNFKDEKFFQPQMPPTRNE 374
+F S++ D+ + + + P +P + N E+ + Q +
Sbjct: 286 SDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVCFSSSNLHLERSNEGQNDAS-GT 344
Query: 375 PPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMA 431
PP + +Y G M+ M Q +Q N++ Q H ++LPQYN PQC V+ M
Sbjct: 345 PPVYHFPFYYPGMMDHGMT-HPPVQNFQGNINNAQVHTPQTLLPQYNVYPQC-HGVSMMP 402
Query: 432 SFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKK 490
F Y P M +Q Q+ + N WP ++P E ++ +RR AAL KFR KRKERCFDKK
Sbjct: 403 PFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKFRLKRKERCFDKK 462
Query: 491 IRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNG 523
+RYVNRK+LAE RPRVRGQFVR+ N ++ G
Sbjct: 463 VRYVNRKKLAETRPRVRGQFVRQANYTDITSTG 495
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/518 (46%), Positives = 307/518 (59%), Gaps = 42/518 (8%)
Query: 13 SGAGIGNSKSSGDG--FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVID 70
+G G G+ G F+DRSKVRILLCD D+ SS V LL CSY VT +SPRQVI+
Sbjct: 2 AGGGEGDRVGVGGAQQFVDRSKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVIN 61
Query: 71 ALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLG 130
LN EG +ID+ILAEVDLP++K KMLKYI R+K+L+ IP+IMMS +DEVSVVVKCLRLG
Sbjct: 62 ILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLG 121
Query: 131 AADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSD 190
AA+YLVKPLRTNELLNLWTH+WRRRRMLGL EKN + +F+LV S+PSDANTNSTTL SD
Sbjct: 122 AAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSD 181
Query: 191 DTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDR 250
+TDD+ + +TN E G S E ES P VA +E + S R
Sbjct: 182 ETDDRPKGNTNQETGTSKQLEYESNP-----SVAEPDQREKMEGVPGSALDASKKSSPRR 236
Query: 251 RTAGPKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQVV 309
+ P K LR+ ESSAF YVK + P SS + S ++ + C +
Sbjct: 237 AFSRPIKTNLRVAESSAFLAYVKPSTPATSSFDSELQRGGSRLDSLDNQGNCSSATDRSD 296
Query: 310 SDTRIH-ENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQM 368
+ T ++ + EA+E +Q SSS ++ MERSS D
Sbjct: 297 TGTDVNIRSKEAFEMPAQYPMVWFSSS---NMHMERSSEGHND----------------- 336
Query: 369 PPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHS---MLPQYNHLPQC-- 423
T PP + +Y G + M SSAQ +Q N++ Q H+ MLPQYN PQC
Sbjct: 337 --TSGTPPAYHFPFYYPGMVEHNMA-LSSAQDFQANINNAQAHTPPAMLPQYNVYPQCHG 393
Query: 424 VPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPST-EVKMNKVDRREAALIKFRQK 481
+P + SF + P M + + N W S ++P E ++ +RR AAL KFR K
Sbjct: 394 LPVI---PSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLK 450
Query: 482 RKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
RKERCFDKK+RYVNRK+LAE RPRVRGQFVR+ +V
Sbjct: 451 RKERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTNTDV 488
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/518 (46%), Positives = 307/518 (59%), Gaps = 42/518 (8%)
Query: 13 SGAGIGNSKSSGDG--FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVID 70
+G G G+ G F+DRSKVRILLCD D+ SS V LL C+Y VT +SPRQV++
Sbjct: 2 AGGGEGDRVGVGGAQQFVDRSKVRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVN 61
Query: 71 ALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLG 130
LN EG +ID+ILAEVDLP++K KMLKYI R+K+L+ IP+IMMS +DEVSVVVKCLRLG
Sbjct: 62 ILNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLG 121
Query: 131 AADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSD 190
AA+YLVKPLRTNELLNLWTH+WRRRRMLGL EKN + +F+LV S+PSDANTNSTTL SD
Sbjct: 122 AAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSD 181
Query: 191 DTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDR 250
+TDD+ + +TN E G S E ES P VA +E + S R
Sbjct: 182 ETDDRPKGNTNQETGTSKQLEYESNP-----SVAEPDQREKMEGVPGSALDASQKSSPRR 236
Query: 251 RTAGPKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQVV 309
+ P K LR+ ESSAF YV+S+ P SS + S ++ + C +
Sbjct: 237 AFSRPIKTNLRVAESSAFLAYVRSSTPATSSFDSELQRGGSRLDSLDNQGNCSSATDKSD 296
Query: 310 SDTRIH-ENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQM 368
+ T ++ N EA+E +Q SSS ++ MERSS D
Sbjct: 297 TGTDVNIRNKEAFEMPAQYPMVWFSSS---NMHMERSSEGHND----------------- 336
Query: 369 PPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQC-- 423
T PP + +Y G + M SSAQ +Q N++ Q H +MLPQYN PQC
Sbjct: 337 --TSGTPPAYHFPFYYPGMVEHNMA-LSSAQDFQANINNAQAHTPPTMLPQYNVYPQCHG 393
Query: 424 VPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPST-EVKMNKVDRREAALIKFRQK 481
+P + SF + P M + + N W S ++P E ++ +RR AAL KFR K
Sbjct: 394 LPVI---PSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLK 450
Query: 482 RKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
RKERCFDKK+RYVNRK+LAE R RVRGQFVR+ +V
Sbjct: 451 RKERCFDKKVRYVNRKKLAETRARVRGQFVRQPTNTDV 488
>gi|327342204|gb|AEA50889.1| toc1 [Populus tremula]
Length = 336
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/340 (63%), Positives = 273/340 (80%), Gaps = 25/340 (7%)
Query: 234 PIDASECGPDVPGISDRRT----AGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDD 289
P D + PDVPGISDRRT +GPKK EL+IGESSAFFTYVKS+ ++SS + ++D
Sbjct: 3 PGDPQKYRPDVPGISDRRTGHLSSGPKKSELKIGESSAFFTYVKSSTVKNSSQGVALIED 62
Query: 290 SAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPP 349
+ +N+RMEEK + C +Q+++D + ENGEA E +SQG+DFRSSSS+PDSLS+ERS TPP
Sbjct: 63 NTNRNLRMEEKLKACGEQMLNDAHLQENGEALEIHSQGDDFRSSSSIPDSLSLERSCTPP 122
Query: 350 T--DFPQNRNFKDEKFFQPQMPPTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQ 399
+FPQ RNFKD++ Q NEP Q+ Y Y+MSG +NQVM+ SSSAQ
Sbjct: 123 MSREFPQ-RNFKDDRVLMHQT----NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQ 176
Query: 400 MYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSY 455
+YQKNLHELQ+H +MLP YNHLPQC+PH++GMASFP+YP+++CLQPGQ+ + SWPS+
Sbjct: 177 LYQKNLHELQSHGTSAMLPGYNHLPQCLPHMSGMASFPFYPVSICLQPGQMPTTPSWPSF 236
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
G S ++VK+N+VDRREAALIKFRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVN
Sbjct: 237 GTSSPSDVKLNQVDRREAALIKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVN 296
Query: 516 GVNVDLNGQPSSVDY-DEDEDEEEEMASRDSSPDNDTSGN 554
GVNVDLNGQP+S DY +++E++++E ASRDSSP++D SG+
Sbjct: 297 GVNVDLNGQPASTDYDEDEEEDDDEQASRDSSPEDDASGS 336
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 246/526 (46%), Positives = 313/526 (59%), Gaps = 44/526 (8%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN EG+++D+ILAEV
Sbjct: 27 FVDRSKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEV 86
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 87 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 146
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGLAEKN + +LV SDPSDANTNSTTL SD+TDD+ + +TN E
Sbjct: 147 LWTHVWRRRRMLGLAEKNFFIDNLELVLSDPSDANTNSTTLLSDETDDRPKENTNHETNT 206
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESS 266
S E ES PVA + D + P G+ R P K LR+GESS
Sbjct: 207 SNQHEYES-PVAEFPKRDQVENLPDIMEYDNN--APYTGGMFSR----PIKTNLRVGESS 259
Query: 267 AFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTRIHENGEAWENYSQ 326
AF YVKS+ P DS +++ + C ++ D+ H+ N S+
Sbjct: 260 AFLAYVKSSTPTDS---------------QLDSEQPRGCDRL--DSMGHQG-----NLSR 297
Query: 327 GEDFRSSSSVPDSLSMERSSTPPTDFP----QNRNFKDEKFFQPQMPPTRNEPPQATYQY 382
D R ++ ++ E++ P +P + N E+ Q Q PP + +
Sbjct: 298 AAD-RIDTNTSINIEDEKAFETPMQYPVVCYSSSNSHHERSNQVQH-DVSGAPPVYHFPF 355
Query: 383 YMSGAMNQVM-LPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPI 438
Y G + M LP Q +Q N++ Q H ++L QYN PQ V+ M SF Y
Sbjct: 356 YYPGMIEHGMALP--PVQNFQGNINSAQPHTPPTLLHQYNVYPQS-HGVSMMPSFQYNHA 412
Query: 439 NMCL-QPGQVSA-NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNR 496
M Q +S N W S ++P + ++ DRR AAL KFRQKRKERCFDKK+RYVNR
Sbjct: 413 GMSFHQSSHLSMQNVWSSVSSTPVPDETCSRSDRRAAALAKFRQKRKERCFDKKVRYVNR 472
Query: 497 KRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVDYDEDEDEEEEMAS 542
K+LAE RPRVRGQFVR+ ++ G S D D+ E EM S
Sbjct: 473 KKLAEIRPRVRGQFVRQAGNADIISTGDDISEDEDDPSSREVEMVS 518
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/517 (46%), Positives = 305/517 (58%), Gaps = 42/517 (8%)
Query: 14 GAGIGNSKSSGDG--FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
G G G+ G F+DRSKVRILLCD D+ S V LL C+Y VT +SPRQVI+
Sbjct: 3 GGGEGDRVGVGGAQQFVDRSKVRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINI 62
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
LN EG +ID+ILAEVDLP++K KMLKYI R+K+L+ IP+IMMS +DEVSVVVKCLRLGA
Sbjct: 63 LNYEGGEIDIILAEVDLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGA 122
Query: 132 ADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDD 191
A+YLVKPLRTNELLNLWTH+WRRRRMLGL EKN + +F+LV S+PSDANTNSTTL SD+
Sbjct: 123 AEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDE 182
Query: 192 TDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRR 251
TDD+ + +TN E G S E ES P VA +E + S R
Sbjct: 183 TDDRPKGNTNQETGTSKQLEYESNP-----SVAEPDQREKMEGVPGSALDASKKSSPRRA 237
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQVVS 310
+ P K LR+ ESSAF YVK + P SS + S ++ + C + +
Sbjct: 238 FSRPIKTNLRVAESSAFLAYVKPSTPATSSFDSELQRGGSRLDSLDNQGNCSSATDRSDT 297
Query: 311 DTRIH-ENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMP 369
T ++ + EA+E +Q SSS ++ MERSS D
Sbjct: 298 GTDVNIRSKEAFEMPAQYPMVWFSSS---NMHMERSSEGHND------------------ 336
Query: 370 PTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHS---MLPQYNHLPQC--V 424
T PP + +Y G + M SSAQ +Q N++ Q H+ MLPQYN PQC +
Sbjct: 337 -TSGTPPAYHFPFYYPGMVEHNMA-LSSAQDFQANINNAQAHTPPAMLPQYNVYPQCHGL 394
Query: 425 PHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPST-EVKMNKVDRREAALIKFRQKR 482
P + SF + P M + + N W S ++P E ++ +RR AAL KFR KR
Sbjct: 395 PVI---PSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLKR 451
Query: 483 KERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
KERCFDKK+RYVNRK+LAE RPRVRGQFVR+ +V
Sbjct: 452 KERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTNTDV 488
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/499 (48%), Positives = 299/499 (59%), Gaps = 40/499 (8%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD D++SS V LL CSY VT +SPRQVI+ LN EG +ID+ILAEV
Sbjct: 22 FVDRSKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEV 81
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+K+L+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLRTNELLN
Sbjct: 82 DLPVSKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLN 141
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGL EKN + +F+LV S+PSDANTNS TL SD+TDD+ + +TN E G
Sbjct: 142 LWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDANTNSATLLSDETDDRPKENTNQETGT 201
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESS 266
S E ES P G A +DAS+ PG R + P K L++ ESS
Sbjct: 202 SNQLEYESNPSVAERDQRDKIG-APGSALDASQSS--TPG---RMFSRPIKTNLKVAESS 255
Query: 267 AFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQ--VVSDTRIHENGEAWEN 323
AF YVKS+ P SS + DS ++ C + +D I N EA+E
Sbjct: 256 AFLAYVKSSTPATSSFDSGLQRGDSRLDSLDNHGNCSSATDRSDTGADVNI-RNKEAFEM 314
Query: 324 YSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYY 383
Q SSS S+ MERS+ D T PP + +Y
Sbjct: 315 PVQYPMVCFSSS---SMHMERSNEGHND-------------------TSGTPPAYHFPFY 352
Query: 384 MSGAMNQVMLPSSSAQMYQKNLHELQNHS---MLPQYNHLPQCVPHVNGMAS-FPYYPIN 439
G + M SS Q +Q N++ Q H+ ML QYN QC H M S F +
Sbjct: 353 YPGMVEHNM-ALSSVQNFQANINSAQAHTPPAMLHQYNVFSQC--HSLPMISPFQFNTSG 409
Query: 440 MCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKR 498
M + + + N W S ++P+ + N+ +RR AAL KFRQKRKERCFDKK+RYVNRK+
Sbjct: 410 MSMHSSHLPTQNVWSSASSTPTPDETCNRSERRAAALAKFRQKRKERCFDKKVRYVNRKK 469
Query: 499 LAERRPRVRGQFVRKVNGV 517
LAE R RVRGQFVR + +
Sbjct: 470 LAETRLRVRGQFVRHASNM 488
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/531 (46%), Positives = 319/531 (60%), Gaps = 42/531 (7%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN EG++ID+ILAEV
Sbjct: 25 FVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEV 84
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 85 DLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 144
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGLAEKN + +LV S+PSDANTNSTTL SD+TDDK + + N E
Sbjct: 145 LWTHVWRRRRMLGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNT 204
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESS 266
S+ E ES AT T + I + PG R P K LRI ESS
Sbjct: 205 SSQYEYES----PATDPPKTDQLENLPSIAEGDDNASSPGGMFSR---PIKTNLRIAESS 257
Query: 267 AFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQV-VSDTRIHENGEAWENYS 325
AF YVKS+ P +SS ++ + Q ++ + D +++ +G +
Sbjct: 258 AFLAYVKSSTPANSS---------------LDTELQRGANKLDIVDHQVNFSGS-----T 297
Query: 326 QGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMS 385
D SS+++ D + E + P + N + E+ + Q + N PP Y +Y
Sbjct: 298 DRIDTNSSTNIQDEKAFEMPTQYPLVCFSSSNLQLEQRNEGQQDVSGN-PPVYHYPFYYP 356
Query: 386 GAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCL 442
G + M S Q +Q N++ Q H +ML QY+ Q + M S+ Y P M +
Sbjct: 357 GMVEHSM-ALHSVQSFQGNINTAQAHTPPTMLHQYSVYHQS-HGASTMPSYQYNPAGMNV 414
Query: 443 QPGQVSA-NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAE 501
+S N W S ++P +E + RR AAL KFRQKRK+RCFDKK+RYVNRK+LAE
Sbjct: 415 HSSHLSMQNVWSSVSSTPISEERHGHSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAE 474
Query: 502 RRPRVRGQFVRKVNGVNVDLNGQPSSVDYDEDEDEEEEMASRD----SSPD 548
RPRVRGQFVR+ + N S+ D D E E+++ +SRD SSP+
Sbjct: 475 TRPRVRGQFVRQAS--NTSYTDIISTGD-DISEYEDDDPSSRDVELVSSPE 522
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/528 (45%), Positives = 312/528 (59%), Gaps = 36/528 (6%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN EG++ID+ILAEV
Sbjct: 25 FVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEV 84
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 85 DLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 144
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGLAEKN + +LV S+PSDANTNSTTL SD+TDDK + + N E
Sbjct: 145 LWTHVWRRRRMLGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNT 204
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESS 266
S+ E ES P A ++ D + P G+ R P K LRI ESS
Sbjct: 205 SSQYEYES-PAADPPKTDQLENLPSIAEDDDNASSPG--GMFSR----PIKTNLRIAESS 257
Query: 267 AFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQV-VSDTRIHENGEAWENYS 325
AF YVKS+ P +SS ++ + Q ++ + D +++ +G +
Sbjct: 258 AFLAYVKSSTPANSS---------------LDTELQRGANKLDIVDHQVNFSGS-----T 297
Query: 326 QGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMS 385
D SS+++ D + E + P + N + E+ + Q + N PP Y +Y
Sbjct: 298 DRIDTNSSTNIQDEKAFEMPTQYPLVCFSSSNLQLEQRNEGQQDVSGN-PPVYHYPFYYP 356
Query: 386 GAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCL 442
G + M S Q +Q N++ Q H +ML QY+ Q + M S+ Y P M +
Sbjct: 357 GMVEHSM-ALHSVQSFQGNINTAQAHTPPTMLHQYSVYHQS-HGASTMPSYQYNPAGMNV 414
Query: 443 QPGQVSA-NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAE 501
+S N W S ++P E + RR AAL KFRQKRK+RCFDKK+RYVNRK+LAE
Sbjct: 415 HSSHLSMQNVWSSVSSTPIPEERHGHSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAE 474
Query: 502 RRPRVRGQFVRKV-NGVNVDLNGQPSSVDYDEDEDEEEEMASRDSSPD 548
RPRVRGQFVR+ N D+ + ED+D SSP+
Sbjct: 475 TRPRVRGQFVRQASNTSYTDIISTGDDISEYEDDDPSSRDVELVSSPE 522
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/528 (45%), Positives = 312/528 (59%), Gaps = 36/528 (6%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+DRSKVRILLCD+D +SS V LL CSYQVT +SPRQVI+ LN EG++ID+ILAEV
Sbjct: 25 FVDRSKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEV 84
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP++K KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLN
Sbjct: 85 DLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 144
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGM 206
LWTH+WRRRRMLGLAEKN + +LV S+PSDANTNSTTL SD+TDDK + + N E
Sbjct: 145 LWTHVWRRRRMLGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNT 204
Query: 207 STHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESS 266
S+ E ES AT T + I + PG R P K LRI ESS
Sbjct: 205 SSQYEYES----PATDPPKTDQLENLPSIAEDDDNASSPGGMFSR---PIKTNLRIAESS 257
Query: 267 AFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQV-VSDTRIHENGEAWENYS 325
AF YVKS+ P +SS ++ + Q ++ + D +++ +G +
Sbjct: 258 AFLAYVKSSTPANSS---------------LDTELQRGANKLDIVDHQVNFSGS-----T 297
Query: 326 QGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMS 385
D SS+++ D + E + P + N + E+ + Q + N PP Y +Y
Sbjct: 298 DRIDTNSSTNIQDEKAFEMPTQYPLVCFSSSNLQLEQRNEGQQDVSGN-PPVYHYPFYYP 356
Query: 386 GAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCL 442
G + M S Q +Q N++ Q H +ML QY+ Q + M S+ Y P M +
Sbjct: 357 GMVEHSM-ALHSVQSFQGNINTAQAHTPPTMLHQYSVYHQS-HGASTMPSYQYNPAGMNV 414
Query: 443 QPGQVSA-NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAE 501
+S N W S ++P +E + RR AAL KFRQKRK+RCFDKK+RYVNRK+LAE
Sbjct: 415 HSSHLSMQNVWSSVSSTPISEERHGHSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAE 474
Query: 502 RRPRVRGQFVRKV-NGVNVDLNGQPSSVDYDEDEDEEEEMASRDSSPD 548
RPRVRGQFVR+ N D+ + ED+D SSP+
Sbjct: 475 TRPRVRGQFVRQASNTSYTDIISTGDDISEYEDDDPSSRDVELVSSPE 522
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/553 (43%), Positives = 328/553 (59%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
SVD EDED+
Sbjct: 527 VVYSVDSSEDEDD 539
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 328/553 (59%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N ++E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSASEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/554 (42%), Positives = 329/554 (59%), Gaps = 47/554 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDFPQNRN 357
V+ +D R + + EA ++ ++ E D L S S +P Q
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQ-VA 352
Query: 358 FKDEKF--FQPQMP-----PTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQN 410
E+F Q +P ++ +++ G MN M S+S + H++ +
Sbjct: 353 LAGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGS 410
Query: 411 HS---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEV 463
H ++P + P +GM A+ PYYP + P + S+++WP N +E
Sbjct: 411 HGAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEP 465
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLN 522
K+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + N
Sbjct: 466 KITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGAN 525
Query: 523 GQPSSVDYDEDEDE 536
G VD EDED+
Sbjct: 526 GVVYGVDSSEDEDD 539
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 328/553 (59%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+++ + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AEKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 327/553 (59%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIELSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 327/553 (59%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/553 (42%), Positives = 325/553 (58%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV-------SDTRIHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ S + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNSPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/553 (42%), Positives = 325/553 (58%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV-------SDTRIHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ S + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNSPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/553 (42%), Positives = 327/553 (59%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N ++E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSASEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ + +RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQXERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/553 (43%), Positives = 325/553 (58%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VVS--DTRIHENG-----EAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ T H G EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNHPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/551 (43%), Positives = 324/551 (58%), Gaps = 41/551 (7%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAA--QNVRMEEKCQPCC 305
+ + + PK EL+ G +SAF TYV +++ +P ++V ++ A Q + EK
Sbjct: 237 AGKFLSYPKSSELKFGGASAFLTYVNASVQAKRTPNQISVGENKASQQETAIPEK-HGMM 295
Query: 306 QQVVSDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----PQN 355
+D R + + EA ++ ++ E D L S S +P P
Sbjct: 296 GPPSTDNRPNGLSHSSEAVKSSNRTEFIPCEEHRRDRLETRSCNVSMSPEIPIGQVAPAG 355
Query: 356 RNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNHS- 412
F + P N ++ +++ G MN M S+S + H++ +H
Sbjct: 356 EQFPKVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHGVHHDVGSHGA 413
Query: 413 --MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMN 466
++P + P +GM A+ PYYP + P + S+++WP N +E K+
Sbjct: 414 PRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPKIT 468
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNGQP 525
+V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 469 QVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGPNGVV 528
Query: 526 SSVDYDEDEDE 536
VD +DED+
Sbjct: 529 YGVDSSDDEDD 539
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/561 (42%), Positives = 326/561 (58%), Gaps = 61/561 (10%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ + +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAASSVLDRSFVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS----------TNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASE 239
DDT+DK RS T PE + +H P ++ S+ G P + E
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDS----PKLELSLKRSSEG-----PPEEPE 232
Query: 240 CGPDVPGISDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEE 299
G ++ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E
Sbjct: 233 LG----SLAGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QE 285
Query: 300 KCQPCCQQVV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPP 349
P V+ +D R + + EA ++ ++ E D L S S +P
Sbjct: 286 TAIPEKHGVMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPE 345
Query: 350 TDF----PQNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQK 403
P F + P N ++ +++ G MN M S+S +
Sbjct: 346 IPIGQVAPAGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPGMMNHSM--SASMHLCHG 403
Query: 404 NLHELQNHS---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYG 456
H++ +H ++P + P +GM A+ PYYP + P + S+++WP
Sbjct: 404 VHHDVGSHGAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMA 458
Query: 457 NSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNG 516
N +E K+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N
Sbjct: 459 NLSVSEPKITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTND 518
Query: 517 VN-VDLNGQPSSVDYDEDEDE 536
+ NG VD EDED+
Sbjct: 519 MEAAGANGVVYGVDSSEDEDD 539
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/553 (42%), Positives = 326/553 (58%), Gaps = 45/553 (8%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS-TNPEIGMS-THQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGI 247
DDT+DK RS PEI T E E + + S ++ P + P++ +
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDSPKLELSLKRSSEGPPEE-----PELGSL 236
Query: 248 SDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQ 307
+ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E P
Sbjct: 237 AGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QETAIPEKHG 293
Query: 308 VV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPPTDF----P 353
V+ +D R + + EA ++ ++ E D L S S +P P
Sbjct: 294 VMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPEIPIGQVAP 353
Query: 354 QNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQKNLHELQNH 411
F + P N ++ +++ MN M S+S + H++ +H
Sbjct: 354 AGEQFPMVQGGLPNEGSGMNNHDISSLPASHFLPSMMNHSM--SASMHLCHGVHHDVGSH 411
Query: 412 S---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVK 464
++P + P +GM A+ PYYP + P + S+++WP N +E K
Sbjct: 412 GAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMANLSVSEPK 466
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNG 523
+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 467 ITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANG 526
Query: 524 QPSSVDYDEDEDE 536
VD EDED+
Sbjct: 527 VVYGVDSSEDEDD 539
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/561 (42%), Positives = 326/561 (58%), Gaps = 61/561 (10%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
G G ++ +G +DRS VRILLCD D +S + LL KCSYQVT+V + R+V+ LN
Sbjct: 2 GKGSISNSDAGSSVLDRSCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
EG +IDLILAEVDLP +KG KMLKYITR LQRIP++MMSAQDEV+VV+KCL+LGAAD
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 134 YLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILS----YDFDLVASDPSDANTNSTTLFS 189
YLVKPLR NELLNLW HMWRRRRMLGLA+KNI+S +D D++ SD SD+NTNST LFS
Sbjct: 122 YLVKPLRINELLNLWMHMWRRRRMLGLADKNIISKNLGHDLDMLVSDLSDSNTNSTNLFS 181
Query: 190 DDTDDKSRRS----------TNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASE 239
DDT+DK RS T PE + +H P ++ S+ G P + E
Sbjct: 182 DDTNDKKVRSHAGPEISTQVTPPECELQSHDS----PKLELSLKRSSEG-----PPEEPE 232
Query: 240 CGPDVPGISDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEE 299
G ++ + + PK+ E++ G +SAF TYV +++ + +P ++V ++ A +E
Sbjct: 233 LG----SLAGKFLSYPKRSEVKFGGASAFLTYVNASVQANRTPNQISVGENKASQ---QE 285
Query: 300 KCQPCCQQVV----SDTR---IHENGEAWENYSQGEDFRSSSSVPDSL---SMERSSTPP 349
P V+ +D R + + EA ++ ++ E D L S S +P
Sbjct: 286 TAIPEKHGVMGPPSTDNRPIGLSHSSEAVKSSNRTEVIPCEEHRRDRLETRSCNVSMSPE 345
Query: 350 TDF----PQNRNFKDEKFFQPQMPPTRNEPPQATY--QYYMSGAMNQVMLPSSSAQMYQK 403
P F + P N ++ +++ MN M S+S +
Sbjct: 346 IPIGQVAPAGEQFPMVQGGLPNEGSGMNNHDISSLPAPHFLPSMMNHSM--SASMHLCHG 403
Query: 404 NLHELQNHS---MLPQYNHLPQCVPHVNGM---ASFPYYPINMCLQPGQV-SANSWPSYG 456
H++ +H ++P + P +GM A+ PYYP + P + S+++WP
Sbjct: 404 VHHDVGSHGAPRLIPFHTFQP-----CHGMPVNATMPYYPYGFVVAPATIGSSHAWPGMA 458
Query: 457 NSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNG 516
N +E K+ +V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N
Sbjct: 459 NLSVSEPKITQVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTND 518
Query: 517 VN-VDLNGQPSSVDYDEDEDE 536
+ NG VD EDED+
Sbjct: 519 MEAAGANGVVYGVDSSEDEDD 539
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/521 (45%), Positives = 305/521 (58%), Gaps = 36/521 (6%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILLCD+D +SS V LL CSYQVT +SPRQVI+ LN EG++ID+ILAEVDLP++K
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
KMLKYI R+KEL+ IP+IMMS +DEVSVVVKCLRLGAA+YLVKPLR NELLNLWTH+WR
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETE 213
RRRMLGLAEKN + +LV S+PSDANTNSTTL SD+TDDK + + N E S+ E E
Sbjct: 121 RRRMLGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNTSSQYEYE 180
Query: 214 SVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESSAFFTYVK 273
S AT T + I + PG R P K LRI ESSAF YVK
Sbjct: 181 S----PATDPPKTDQLENLPSIAEDDDNASSPGGMFSR---PIKTNLRIAESSAFLAYVK 233
Query: 274 SNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQV-VSDTRIHENGEAWENYSQGEDFRS 332
S+ P +SS ++ + Q ++ + D +++ +G + D S
Sbjct: 234 SSTPANSS---------------LDTELQRGANKLDIVDHQVNFSGS-----TDRIDTNS 273
Query: 333 SSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMSGAMNQVM 392
S+++ D + E + P + N + E+ + Q + N PP Y +Y G + M
Sbjct: 274 STNIQDEKAFEMPTQYPLVCFSSSNLQLEQRNEGQQDVSGN-PPVYHYPFYYPGMVEHSM 332
Query: 393 LPSSSAQMYQKNLHELQNH---SMLPQYNHLPQCVPHVNGMASFPYYPINMCLQPGQVSA 449
S Q +Q N++ Q H +ML QY+ Q + M S+ Y P M + +S
Sbjct: 333 -ALHSVQSFQGNINTAQAHTPPTMLHQYSVYHQS-HGASTMPSYQYNPAGMNVHSSHLSM 390
Query: 450 -NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRG 508
N W S ++P +E + RR AAL KFRQKRK+RCFDKK+RYVNRK+LAE RPRVRG
Sbjct: 391 QNVWSSVSSTPISEERHGHSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKLAETRPRVRG 450
Query: 509 QFVRKV-NGVNVDLNGQPSSVDYDEDEDEEEEMASRDSSPD 548
QFVR+ N D+ + ED+D SSP+
Sbjct: 451 QFVRQASNTSYTDIISTGDDISEYEDDDPSSRDVELVSSPE 491
>gi|339778505|gb|AEK06134.1| timing of cab 1 [Populus balsamifera]
gi|339778507|gb|AEK06135.1| timing of cab 1 [Populus balsamifera]
gi|339778511|gb|AEK06137.1| timing of cab 1 [Populus balsamifera]
gi|339778513|gb|AEK06138.1| timing of cab 1 [Populus balsamifera]
gi|339778515|gb|AEK06139.1| timing of cab 1 [Populus balsamifera]
gi|339778523|gb|AEK06143.1| timing of cab 1 [Populus balsamifera]
gi|339778527|gb|AEK06145.1| timing of cab 1 [Populus balsamifera]
gi|339778531|gb|AEK06147.1| timing of cab 1 [Populus balsamifera]
gi|339778535|gb|AEK06149.1| timing of cab 1 [Populus balsamifera]
gi|339778539|gb|AEK06151.1| timing of cab 1 [Populus balsamifera]
gi|339778541|gb|AEK06152.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/288 (65%), Positives = 233/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GMASFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|339778537|gb|AEK06150.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/288 (65%), Positives = 233/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GMASFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VA DPS
Sbjct: 178 LLGLAEKNILNYDFDPVALDPS 199
>gi|339778519|gb|AEK06141.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/288 (65%), Positives = 232/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + + D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIXDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GMASFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|339778501|gb|AEK06132.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/288 (64%), Positives = 232/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GM SFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMTSFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|339778525|gb|AEK06144.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/288 (64%), Positives = 232/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GM SFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMTSFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|339778509|gb|AEK06136.1| timing of cab 1 [Populus balsamifera]
gi|339778517|gb|AEK06140.1| timing of cab 1 [Populus balsamifera]
gi|339778521|gb|AEK06142.1| timing of cab 1 [Populus balsamifera]
gi|339778529|gb|AEK06146.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/288 (64%), Positives = 232/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GM SFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMXSFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|339778503|gb|AEK06133.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 187/288 (64%), Positives = 232/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLQENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GMASFPYYP+++CLQPGQ+ + SWPS+G+S S++ K+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMASFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDXKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|339778533|gb|AEK06148.1| timing of cab 1 [Populus balsamifera]
Length = 557
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 187/288 (64%), Positives = 232/288 (80%), Gaps = 20/288 (6%)
Query: 252 TAGPKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSAAQNVRMEEKCQPCCQQVVSD 311
++GPKK EL+IG+SSAFFTYVKS+ +++S + ++D+ QN+RMEEK Q C +Q+++D
Sbjct: 276 SSGPKKSELKIGKSSAFFTYVKSSTVKNNSQGVALIEDNTNQNLRMEEKLQVCGEQMLND 335
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT--DFPQNRNFKDEKFFQPQMP 369
+ ENGEA E +SQ +DFRSSSS+PDSLS+ERS TPP +FPQ RNFKD++ Q
Sbjct: 336 AHLXENGEALEIHSQVDDFRSSSSIPDSLSLERSCTPPMSREFPQ-RNFKDDRVLMHQT- 393
Query: 370 PTRNEP--------PQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNH---SMLPQYN 418
NEP Q+ Y Y+MSG +NQVM+ SSSAQ+YQKNLHELQ+H +MLP YN
Sbjct: 394 ---NEPQLDASSLSTQSVYPYFMSGVVNQVMM-SSSAQLYQKNLHELQSHGTSAMLPGYN 449
Query: 419 HLPQCVPHVNGMASFPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIK 477
HLPQC PH++GM SFPYYP+++CLQPGQ+ + SWPS+G+S S++VK+NKVDRREAAL K
Sbjct: 450 HLPQCPPHMSGMXSFPYYPVSICLQPGQMPTTPSWPSFGSSTSSDVKLNKVDRREAALNK 509
Query: 478 FRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
FRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFVRKVNGVNVDLNGQP
Sbjct: 510 FRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKVNGVNVDLNGQP 557
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 95/99 (95%)
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
TSVRS RQVIDALNAEG +ID+IL+EVD+PMTKG+KMLKYI RDK+L+RIPVIMMSAQDE
Sbjct: 1 TSVRSARQVIDALNAEGPEIDIILSEVDIPMTKGMKMLKYIMRDKDLRRIPVIMMSAQDE 60
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
VS+VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR M+
Sbjct: 61 VSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRHMM 99
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 21/22 (95%)
Query: 157 MLGLAEKNILSYDFDLVASDPS 178
+LGLAEKNIL+YDFD VASDPS
Sbjct: 178 LLGLAEKNILNYDFDPVASDPS 199
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 202/520 (38%), Positives = 276/520 (53%), Gaps = 75/520 (14%)
Query: 24 GDGFI--DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
G+G I DRS+VRILLCD DS ++ V LL +CSYQV+ V++ RQV++ LN S +DL
Sbjct: 3 GEGKIGFDRSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDL 62
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
+L+EV+LP +G KMLK+I + + + IP++MMSA+DE++VVVKCL+LGAADYLVKPLR
Sbjct: 63 VLSEVELPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRI 122
Query: 142 NELLNLWTHMWRRRRMLGLAEKNILSYDF-------DLVASDPSDANTNSTTLFSDDTDD 194
NELLNLWTHMWRRRRMLGL EK+IL ++ SD S++NT ST +FS+D++D
Sbjct: 123 NELLNLWTHMWRRRRMLGLTEKHILKGHLSSRNTIAEIFVSDTSESNTFSTDIFSEDSND 182
Query: 195 KSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAG 254
+ P I Q E T ST T EP +RR +
Sbjct: 183 NKVKKLKP-ISEEEEQAPELELSLTPKSKDSTRTTEIGEP--------------ERRPSP 227
Query: 255 PKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVD--DSAAQNVRMEEKCQPCCQQVVSDT 312
P+K EL++G+SSAF +Y + R N + DS Q P C +V T
Sbjct: 228 PRKSELKLGQSSAFLSYTR------VVSRTTNAEKPDSTTQ--------PPTCMEVPVGT 273
Query: 313 R-----IHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQ 367
+ E G+ +Q + + D P + + Q Q
Sbjct: 274 SQQPLDLEEPGQVGARGNQAAELTQTQEPDDDPEQSHHHHHQHSIPWSSSSTTGAAEQYQ 333
Query: 368 MPPTRNEP--PQATYQYYMSGAMNQ------VMLPSSSAQMYQKNLHELQNHSMLPQYNH 419
+ N+P A + +G NQ +M+P H + ++L H
Sbjct: 334 VLQI-NDPRAAAAAAAHAATGVFNQAHIIPPLMVP-----------HSIHPSTLLQPPIH 381
Query: 420 LPQCVPHVNGM----ASFPYYPINMCLQPGQV--SANSWPSYGNSPSTEVKMNKVDRREA 473
Q VP A+F YYP + + QV +A + P G E K +RREA
Sbjct: 382 YYQAVPPPEATPIPAAAFSYYPFPLHIPSQQVPWNAAALPQVG----LERKAGVAERREA 437
Query: 474 ALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
AL KFRQKRK+RC++KKIRY +RKRLAE+RPRV+GQFVR+
Sbjct: 438 ALHKFRQKRKDRCYEKKIRYASRKRLAEQRPRVKGQFVRR 477
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 277/535 (51%), Gaps = 102/535 (19%)
Query: 24 GDGFI--DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
G+G I DRS+VRILLCD DS ++ V LL +CSYQV+ V++ RQV++ LN S +DL
Sbjct: 3 GEGKIGFDRSRVRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDL 62
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
+L+EV+LP +G KMLK+I + + + IP++MMSA+DE++VVVKCL+LGAADYLVKPLR
Sbjct: 63 VLSEVELPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRI 122
Query: 142 NELLNLWTHMWRRRRMLGLAEKNILSYDF-------DLVASDPSDANTNSTTLFSDDTDD 194
NELLNLWTHMWRRRRMLGL EK+IL ++ SD S++NT ST +FS+D++D
Sbjct: 123 NELLNLWTHMWRRRRMLGLTEKHILKGHLSSRNTIAEIFVSDTSESNTFSTDIFSEDSND 182
Query: 195 KSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAG 254
+ P I Q E T ST T EP +RR +
Sbjct: 183 NKVKKLKP-ISEDEEQAPELELSLTPKSKDSTRTTEIGEP--------------ERRPSP 227
Query: 255 PKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVD--DSAAQNVRMEEKCQPCCQQVVSDT 312
+K EL++G+SSAF +Y + R N + DS Q P C +V T
Sbjct: 228 LRKSELKLGQSSAFLSYTR------LVSRTTNAEKPDSTTQ--------PPTCMEVPVGT 273
Query: 313 R-----IHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQ 367
+ E G+ +Q + + P D P+ + Q
Sbjct: 274 SQQPLDLEEPGQVGARGNQAAELTQTQE-------------PDDDPEQSHHHHHHHHQHS 320
Query: 368 MPPTRNEPPQATYQYYM-----------------SGAMNQ------VMLPSSSAQMYQKN 404
+P + + A QY + +G NQ +M+P
Sbjct: 321 IPWSSSSTTGAAEQYQVLQINDPRAAAAAAAHAATGVFNQAHIIPPLMVP---------- 370
Query: 405 LHELQNHSMLPQYNHLPQCVPHVNGM----ASFPYYPINMCLQPGQV--SANSWPSYGNS 458
H + ++L H Q VP A+F YYP + + QV +A + P G
Sbjct: 371 -HSIHPSTLLQPPIHYYQAVPPPEATPIPAAAFSYYPFPLHIPSQQVPWNAAALPQVG-- 427
Query: 459 PSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
E K +RREAAL KFRQKRK+RC++KKIRY +RKRLAE+RPRV+GQFVR+
Sbjct: 428 --PERKAGVAERREAALHKFRQKRKDRCYEKKIRYASRKRLAEQRPRVKGQFVRR 480
>gi|414589073|tpg|DAA39644.1| TPA: hypothetical protein ZEAMMB73_370141 [Zea mays]
gi|414872989|tpg|DAA51546.1| TPA: hypothetical protein ZEAMMB73_745932 [Zea mays]
Length = 576
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 170/330 (51%), Gaps = 50/330 (15%)
Query: 114 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLV 173
MS +DEVSVVVKCLRLGAA+YLVKPLRTNELLNLWTH+WRRRRMLGL EKN + +F+LV
Sbjct: 1 MSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELV 60
Query: 174 ASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVE 233
S+PSDANTNSTTL SD+TDD+ + +TN E G S E ES P VA +E
Sbjct: 61 LSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEYESNP-----SVAEPDQREKME 115
Query: 234 PIDASECGPDVPGISDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSS---------PRI 284
+ S R + P K LR+ ESSAF YVKS+ P SS R+
Sbjct: 116 GVPGSALDASQKSSPRRAFSRPIKTNLRVAESSAFLAYVKSSTPATSSFDSELQRGGSRL 175
Query: 285 VNVDDSAAQNVRMEEKCQPCCQQVVSDTRIH-ENGEAWENYSQGEDFRSSSSVPDSLSME 343
++D+ C + + T ++ N EA+E +Q SSS ++ ME
Sbjct: 176 DSLDNQG--------NCSSATDRSDTGTDVNIRNKEAFEMPAQYPMVWFSSS---NMHME 224
Query: 344 RSSTPPTDFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQK 403
RSS D T PP + +Y G + M SSAQ +Q
Sbjct: 225 RSSEGHND-------------------TSGTPPAYHFPFYYPGMVEHNM-ALSSAQDFQA 264
Query: 404 NLHELQNHSMLPQYNHLPQCVPHVNGMASF 433
N++ Q H+ PQ C H G ++
Sbjct: 265 NINNAQAHT--PQEGTFKIC--HYAGEVTY 290
>gi|414880045|tpg|DAA57176.1| TPA: hypothetical protein ZEAMMB73_006515 [Zea mays]
Length = 387
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 166/313 (53%), Gaps = 32/313 (10%)
Query: 113 MMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDL 172
+MS +DEVSVVVKCLRLGAA+YLVKPLRTNELLNLWTH+WRRRRMLGL EKN + +F+L
Sbjct: 22 VMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFEL 81
Query: 173 VASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAV 232
V S+PSDANTNSTTL SD+TDD+ + +TN E G S E ES P VA +
Sbjct: 82 VLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEYESNP-----SVAEPDQREKM 136
Query: 233 EPIDASECGPDVPGISDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSA 291
E + S R + P K LR+ ESSAF YVKS+ P SS + S
Sbjct: 137 EGVPGSALDASKKSSPRRAFSRPIKTNLRVAESSAFLAYVKSSTPATSSFDSELQRGGSR 196
Query: 292 AQNVRMEEKCQPCCQQVVSDTRIH-ENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT 350
++ + C + + T ++ N EA+E +Q SSS ++ MERSS
Sbjct: 197 LDSLDNQGNCSSATDRSDTGTDVNIRNKEAFEMPAQYPMVWFSSS---NMHMERSSEGHN 253
Query: 351 DFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQN 410
D T PP + +Y G + M SSAQ +Q N++ Q
Sbjct: 254 D-------------------TSGTPPAYHFPFYYPGMVEHNM-ALSSAQDFQANINNAQA 293
Query: 411 HSMLPQYNHLPQC 423
H+ PQ C
Sbjct: 294 HT--PQEGTFKVC 304
>gi|414881734|tpg|DAA58865.1| TPA: hypothetical protein ZEAMMB73_047455 [Zea mays]
Length = 776
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 166/313 (53%), Gaps = 32/313 (10%)
Query: 113 MMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDL 172
+MS +DEVSV VKCLRLGAA+YLVKPLRTNELLNLWTH+W+RRRMLGL +KN + +F+L
Sbjct: 134 VMSNRDEVSVFVKCLRLGAAEYLVKPLRTNELLNLWTHVWQRRRMLGLPKKNFFNDNFEL 193
Query: 173 VASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAV 232
V S+PSDANTNSTTL SD+TDD+ + +TN E G S E ES P +VA +
Sbjct: 194 VLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEYESNP-----LVAEPDQREKM 248
Query: 233 EPIDASECGPDVPGISDRRTAGPKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSA 291
E + S R + P K LR+ ESSAF YVKS+ P SS + S
Sbjct: 249 EGVPGSALDASQKSSPRRVFSRPIKTNLRVAESSAFLAYVKSSTPATSSFDSELQRGGSR 308
Query: 292 AQNVRMEEKCQPCCQQVVSDTRIH-ENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPT 350
++ + C + + T ++ N EA+E +Q SSS ++ MERSS
Sbjct: 309 LDSLDNQGNCSSATDRSDTGTDVNIRNKEAFEMPAQYPMVWFSSS---NMHMERSSEGHN 365
Query: 351 DFPQNRNFKDEKFFQPQMPPTRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQN 410
D T PP + +Y G + M SSAQ +Q N++ Q
Sbjct: 366 D-------------------TSGTPPAYHFPFYYPGMVEHNM-ALSSAQDFQANINNAQA 405
Query: 411 HSMLPQYNHLPQC 423
H+ PQ C
Sbjct: 406 HT--PQEGTFKIC 416
>gi|225457351|ref|XP_002284703.1| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 163
Score = 150 bits (379), Expect = 2e-33, Method: Composition-based stats.
Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
Query: 13 SGAGI-GNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
S AG+ G++ IDRSK+RILLCD ++ S V SLL +CSYQV SV S + I
Sbjct: 12 SDAGVSGSTNKKIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQVISVGSTGEAIHV 71
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
L++EG ID++LAE+DLPM LKMLKYIT D+EL+ IPVIM+ +D++S++ CLR GA
Sbjct: 72 LSSEGPSIDIVLAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGA 131
Query: 132 ADYLVKPLRTNELLNLWTHM 151
DYL+ PL NELLNL HM
Sbjct: 132 VDYLLTPLGINELLNLSIHM 151
>gi|147817751|emb|CAN66659.1| hypothetical protein VITISV_031719 [Vitis vinifera]
Length = 205
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 105/166 (63%), Gaps = 14/166 (8%)
Query: 13 SGAGI-GNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
S AG+ G++ IDRSK+RILLCD ++ S V SLL +CSYQ S + I
Sbjct: 12 SDAGVSGSTNKKIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQ----GSTGEAIHV 67
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
L++EG ID++LAE+DLPM LKMLKYIT D+EL+ IPVIM+ +D++S++ CLR GA
Sbjct: 68 LSSEGPSIDIVLAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGA 127
Query: 132 ADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDP 177
DYL+ PL NELLNL HM + EKN DF+ V P
Sbjct: 128 VDYLLTPLGINELLNLSIHMESKAH-----EKN----DFERVLERP 164
>gi|297733947|emb|CBI15194.3| unnamed protein product [Vitis vinifera]
Length = 159
Score = 139 bits (351), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/140 (52%), Positives = 96/140 (68%), Gaps = 5/140 (3%)
Query: 13 SGAGI-GNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
S AG+ G++ IDRSK+RILLCD ++ S V SLL +CSYQ S + I
Sbjct: 12 SDAGVSGSTNKKIRALIDRSKLRILLCDTNAGSCKEVASLLKECSYQ----GSTGEAIHV 67
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
L++EG ID++LAE+DLPM LKMLKYIT D+EL+ IPVIM+ +D++S++ CLR GA
Sbjct: 68 LSSEGPSIDIVLAELDLPMANCLKMLKYITEDQELRCIPVIMLVTEDKISMIANCLRYGA 127
Query: 132 ADYLVKPLRTNELLNLWTHM 151
DYL+ PL NELLNL HM
Sbjct: 128 VDYLLTPLGINELLNLSIHM 147
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 85/135 (62%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
DGF+ R +R+LL + D ++ + +LL KCSY+V SV + + L IDLIL
Sbjct: 57 DGFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLILT 116
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EVDLP G +L I + + IPVIMMS+QD +S V KC+ GAADYLVKPLR NEL
Sbjct: 117 EVDLPSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNEL 176
Query: 145 LNLWTHMWRRRRMLG 159
NLW H+WRR+ L
Sbjct: 177 RNLWQHVWRRQSSLA 191
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+
Sbjct: 474 QREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 519
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY+V +V + +AL E ++DLIL EV
Sbjct: 45 FLPRMVLRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEV 104
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L I D ++IPVIMMS+ D +S+V+KC+ GAAD+LVKP+R NEL N
Sbjct: 105 ELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRN 164
Query: 147 LWTHMWRRR 155
LW H+WRR
Sbjct: 165 LWQHVWRRH 173
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 43/45 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL+KFR KRK+RCF+KK+RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 588 QREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQV 632
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY+V +V + +AL E ++DLIL EV
Sbjct: 45 FLPRMVLRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEV 104
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L I D ++IPVIMMS+ D +S+V+KC+ GAAD+LVKP+R NEL N
Sbjct: 105 ELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXN 164
Query: 147 LWTHMWRRR 155
LW H+WRR
Sbjct: 165 LWQHVWRRH 173
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 43/45 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL+KFR KRK+RCF+KK+RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 693 QREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQV 737
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Query: 9 NKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQV 68
N++CS +G G + F+ + +R+LL + D ++ + +LL KC Y+V +V +
Sbjct: 38 NRDCSSSGFGIGIK-WERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKA 96
Query: 69 IDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLR 128
+ L ++DLILAEV+LP G +L I + + IPVIMMS++D +S V KC+
Sbjct: 97 WEILKERPRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMM 156
Query: 129 LGAADYLVKPLRTNELLNLWTHMWRRR 155
GAADYLVKPLR NEL NLW H+WRR+
Sbjct: 157 KGAADYLVKPLRRNELRNLWQHVWRRQ 183
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+V
Sbjct: 636 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRV 680
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Query: 9 NKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQV 68
N++CS +G G + F+ + +R+LL + D ++ + +LL KC Y+V +V +
Sbjct: 38 NRDCSSSGFGIGIK-WERFLPKMMLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKA 96
Query: 69 IDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLR 128
+ L ++DLILAEV+LP G +L I + + IPVIMMS++D +S V KC+
Sbjct: 97 WEILKERPRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMM 156
Query: 129 LGAADYLVKPLRTNELLNLWTHMWRRR 155
GAADYLVKPLR NEL NLW H+WRR+
Sbjct: 157 KGAADYLVKPLRRNELRNLWQHVWRRQ 183
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+V
Sbjct: 636 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRV 680
>gi|413923084|gb|AFW63016.1| hypothetical protein ZEAMMB73_883721 [Zea mays]
gi|413923085|gb|AFW63017.1| hypothetical protein ZEAMMB73_883721 [Zea mays]
Length = 298
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 138/275 (50%), Gaps = 37/275 (13%)
Query: 255 PKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQVVSDTR 313
P K LR+ ESSAF YVK + P SS + S ++ + C + + T
Sbjct: 24 PIKTNLRVAESSAFLAYVKPSTPATSSFDSELQRGGSRLDSLDNQGNCSSATDRSDTGTD 83
Query: 314 IH-ENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPTR 372
++ + EA+E +Q SSS ++ MERSS D T
Sbjct: 84 VNIRSKEAFEMPAQYPMVWFSSS---NMHMERSSEGHND-------------------TS 121
Query: 373 NEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHS---MLPQYNHLPQCVPHVNG 429
PP + +Y G + M SSAQ +Q N++ Q H+ MLPQYN PQC +G
Sbjct: 122 GTPPAYHFPFYYPGMVEHNMA-LSSAQDFQANINNAQAHTPPAMLPQYNVYPQC----HG 176
Query: 430 MA---SFPYYPINMCLQPGQV-SANSWPSYGNSPST-EVKMNKVDRREAALIKFRQKRKE 484
+ SF + P M + + N W S ++P E ++ +RR AAL KFR KRKE
Sbjct: 177 LPVIPSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLKRKE 236
Query: 485 RCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
RCFDKK+RYVNRK+LAE RPRVRGQFVR+ +V
Sbjct: 237 RCFDKKVRYVNRKKLAETRPRVRGQFVRQPTNTDV 271
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 84/128 (65%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +++LL D+D ++ + V +LL C Y+VT+V + Q AL G+ IDL+L EV
Sbjct: 80 FLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEV 139
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I L+ IPVIMMS+ D + +V KCL GAAD+LVKP+R NEL N
Sbjct: 140 AMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKN 199
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 200 LWQHVWRR 207
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 15/81 (18%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK-VNGVNVDLNGQPSSVD 529
REAAL KFR KRKERCF+KK+RY +RK+LA++RPRVRGQFV++ V G N
Sbjct: 714 REAALTKFRLKRKERCFEKKVRYQSRKKLADQRPRVRGQFVKQIVYGTN----------- 762
Query: 530 YDEDEDEEEEMASRDSSPDND 550
E+ E EE+ S D S +ND
Sbjct: 763 --EENKESEELVSMDDS-NND 780
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 84/128 (65%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +++LL D+D ++ + V +LL C Y+VT+V + Q AL G+ IDL+L EV
Sbjct: 68 FLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEV 127
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I L+ IPVIMMS+ D + +V KCL GAAD+LVKP+R NEL N
Sbjct: 128 AMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKN 187
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 188 LWQHVWRR 195
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 14/77 (18%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK-VNGVNVDLNGQPSSVD 529
REAAL KFR KRKERCF+KK+RY +RK+LA++RPRVRGQFV++ V G N
Sbjct: 702 REAALTKFRLKRKERCFEKKVRYQSRKKLADQRPRVRGQFVKQIVYGTN----------- 750
Query: 530 YDEDEDEEEEMASRDSS 546
E+ E EE+ S D S
Sbjct: 751 --EENKESEELVSMDDS 765
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 87/139 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY+V + + + L + SDIDLIL EV
Sbjct: 29 FLPRMVLRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEV 88
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IPVIMMS+ D VS+V+KC+ GAAD+L+KP+R NEL N
Sbjct: 89 DLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRN 148
Query: 147 LWTHMWRRRRMLGLAEKNI 165
LW H+WRR + + +N
Sbjct: 149 LWQHVWRRHAVCHMPPQNF 167
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
++ REAAL KFR KRK+RC++KK+RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 642 HRTSHREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQV 690
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 83/123 (67%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL + D ++ + +LL KCSY+V +V + +AL E ++DLIL EV+LP
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I D ++IPVIMMS+ D +S+V+KC+ GAAD+LVKP+R NEL NLW H+W
Sbjct: 63 GFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHVW 122
Query: 153 RRR 155
RR
Sbjct: 123 RRH 125
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 43/45 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL+KFR KRK+RCF+KK+RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 540 QREAALMKFRLKRKDRCFEKKVRYQSRKRLAEQRPRVKGQFVRQV 584
>gi|413937817|gb|AFW72368.1| hypothetical protein ZEAMMB73_306899 [Zea mays]
Length = 278
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 136/277 (49%), Gaps = 34/277 (12%)
Query: 255 PKKIELRIGESSAFFTYVKSNMPRDSS-PRIVNVDDSAAQNVRMEEKCQPCCQQ--VVSD 311
P K L++ ESSAF YVKS+ P SS + DS ++ C + +D
Sbjct: 5 PIKTNLKVAESSAFLAYVKSSTPATSSFDSGLQRGDSRLDSLDNHGNCSSATDRSDTGAD 64
Query: 312 TRIHENGEAWENYSQGEDFRSSSSVPDSLSMERSSTPPTDFPQNRNFKDEKFFQPQMPPT 371
I N EA+E Q SSS S+ MERS+ D T
Sbjct: 65 VNI-RNKEAFEMPVQYPMVCFSSS---SMHMERSNEGHND-------------------T 101
Query: 372 RNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHS---MLPQYNHLPQCVPHVN 428
PP + +Y G + M SS Q +Q N++ Q H+ ML QYN QC H
Sbjct: 102 SGTPPAYHFPFYYPGMVEHNMA-LSSVQNFQANINSAQAHTPPAMLHQYNVFSQC--HSL 158
Query: 429 GMAS-FPYYPINMCLQPGQV-SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERC 486
M S F + M + + + N W S ++P+ + N+ +RR AAL KFRQKRKERC
Sbjct: 159 PMISPFQFNTSGMSMHSSHLPTQNVWSSASSTPTPDETCNRSERRAAALAKFRQKRKERC 218
Query: 487 FDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNG 523
FDKK+RYVNRK+LAE R RVRGQFVR + +++ G
Sbjct: 219 FDKKVRYVNRKKLAETRLRVRGQFVRHASNMDIISTG 255
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 4/162 (2%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D ++ + +LL KCSY+V +V + + L ++DLIL EV
Sbjct: 43 FLPKMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWELLKGRPHNVDLILTEV 102
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + + IPVIMMS+QD +S V KC+ GAADYLVKP+R NEL N
Sbjct: 103 DLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRN 162
Query: 147 LWTHMWRRRR----MLGLAEKNILSYDFDLVASDPSDANTNS 184
LW H+WRR+ + GL ++++ + A + + +N +S
Sbjct: 163 LWQHVWRRQSSTTGINGLQDESVAQQKVEATAENNAASNRSS 204
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+
Sbjct: 592 QREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 637
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D + R +R+LL ++D ++ V +LL KC Y+V +V + + + DL+L
Sbjct: 30 DEILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLT 89
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV++P G+ +L I E + IPVIMMS+QD + V+KC++ GA D+LVKP+R NEL
Sbjct: 90 EVNMPTLSGIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNEL 149
Query: 145 LNLWTHMWRRRRM---LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTN 201
NLW H+WRR M L +E N S + + S NS SD S+R T
Sbjct: 150 RNLWQHVWRRHSMNSQLNASENNAASNHISVNSGTGSKTGENSDE-ESDAQSSGSKRET- 207
Query: 202 PEIGMSTHQETESVPVATATVVAST 226
EI Q E +P VAS+
Sbjct: 208 -EI-----QSVEKLPETVTHNVASS 226
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 40/42 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
RREAAL+KFR KRK+RCF+KK+RY +RK+LAE+RPR++GQFV
Sbjct: 630 RREAALMKFRMKRKDRCFEKKVRYHSRKKLAEQRPRIKGQFV 671
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 84/139 (60%), Gaps = 6/139 (4%)
Query: 24 GDG------FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
GDG F+ + +R+LL + D ++ + +LL KCSY+V +V + + L
Sbjct: 40 GDGLVKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPE 99
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
+DLILAEVDLP G +L I + IPVIMMS D V+ V KC+ GAADYLVK
Sbjct: 100 SVDLILAEVDLPSISGYALLTLIMEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVK 159
Query: 138 PLRTNELLNLWTHMWRRRR 156
PLR NEL NLW H+WRRR+
Sbjct: 160 PLRRNELRNLWQHVWRRRQ 178
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 46/66 (69%)
Query: 460 STEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
S+ V K REAAL KFR KRK+RCFDKK+RY +RK+LAE+RPR++GQFVR+V
Sbjct: 431 SSSVGKTKQSLREAALNKFRMKRKDRCFDKKVRYESRKKLAEQRPRIKGQFVRQVQSTET 490
Query: 520 DLNGQP 525
P
Sbjct: 491 STQQAP 496
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D ++ + +LL KCSY+V +V + + L ++DLIL EV
Sbjct: 44 FLPKMILRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEV 103
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + + IPVIMMS+QD +S V KC+ GAADYLVKP+R NEL N
Sbjct: 104 DLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRN 163
Query: 147 LWTHMWRRR 155
LW H+WRR+
Sbjct: 164 LWQHVWRRQ 172
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+
Sbjct: 629 QREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 674
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 11/206 (5%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D + R +R+LL ++D ++ V +LL KC Y+V +V + + + DL+L
Sbjct: 10 DEILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLT 69
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EVD+P G+ +L I E + IPVIMMS+QD + V++C++ GA D+LVKP+R NEL
Sbjct: 70 EVDMPTLSGIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNEL 129
Query: 145 LNLWTHMWRRRRM---LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTN 201
NLW H+WRR M +E N AS+ AN+ + + D++D++S ++
Sbjct: 130 RNLWQHVWRRHSMNTQTNASENN--------AASNHISANSGNRSKTGDNSDEESDAQSS 181
Query: 202 PEIGMSTHQETESVPVATATVVASTS 227
+ Q E +P AS+S
Sbjct: 182 GSKRETEIQSVEKLPETVTENGASSS 207
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 40/42 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
RREAAL+KFR KRK+RC++KK+RY +RK+LAE+RPR++GQFV
Sbjct: 620 RREAALMKFRMKRKDRCYEKKVRYHSRKKLAEQRPRIKGQFV 661
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 84/133 (63%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
+ R +R+LL + D ++ + +LL KCSY+V +V + + L + +IDLIL EV
Sbjct: 38 LLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEV 97
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L I + + IPVIMMS+QD VS V KC+ GAADYLVKP+R NEL N
Sbjct: 98 ELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRN 157
Query: 147 LWTHMWRRRRMLG 159
LW H+WRR+ L
Sbjct: 158 LWQHVWRRQSSLA 170
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 42/46 (91%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL KFR KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+ +
Sbjct: 615 QREAALNKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQAH 660
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 83/133 (62%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D + R +R+LL ++D ++ V +LL KC Y+V +V + + + D DL+L
Sbjct: 45 DQILPRRSLRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDLVLT 104
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV +P G+++L I E + IPVIMMS+QD + V+KC++ GA D+LVKP+R NEL
Sbjct: 105 EVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNEL 164
Query: 145 LNLWTHMWRRRRM 157
NLW H+WRR M
Sbjct: 165 GNLWQHVWRRHAM 177
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 441 CLQPGQVSANSWPSYGNSPSTEVKMNKVDR--REAALIKFRQKRKERCFDKKIRYVNRKR 498
C G+ N+ + E + DR REAAL+KFR KRK+RCFDKK+RY +RK+
Sbjct: 607 CTGSGEADTNANTTVALESGNESGIQNSDRSHREAALMKFRMKRKDRCFDKKVRYHSRKK 666
Query: 499 LAERRPRVRGQFV 511
LAE+RPRV+GQFV
Sbjct: 667 LAEQRPRVKGQFV 679
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 85/131 (64%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R + +LL + D ++ + +LL KCSY+V +V + L +IDLIL EV
Sbjct: 38 FLPRMVLSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEV 97
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP+ G +L +T + IPVIMMS+QD +S+V+KC+ GAAD+L+KP+R NEL N
Sbjct: 98 ELPLISGYALLTLVTEHAVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRN 157
Query: 147 LWTHMWRRRRM 157
LW H+WRR+ +
Sbjct: 158 LWQHVWRRQTL 168
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRK+RC++KK+RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 664 QREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQV 708
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 82/133 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D ++ + +LL KCSY+V +V + + L + +DLIL EV
Sbjct: 44 FLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEV 103
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IPVIMMS QD V+ V KC+ GAADYLVKPLR NEL N
Sbjct: 104 DLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRN 163
Query: 147 LWTHMWRRRRMLG 159
LW H+WRR+ L
Sbjct: 164 LWQHVWRRQTSLA 176
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 45/51 (88%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
K+ + +REAAL KFR KRK+RC++KK+RY +RK+LAE+RPR++GQFVR+V
Sbjct: 502 KIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 552
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D F+ +++LL +ND ++ V +LL CSY+VT+V + Q L + ID++L
Sbjct: 87 DSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLT 146
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV +P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 147 EVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNEL 206
Query: 145 LNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEI 204
NLW H+WRR + + V S +D + N+T +D++ ST P I
Sbjct: 207 KNLWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNT----GSSDERDNGSTGPSI 262
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
G V+ ++ +REAAL KFRQKRKERCF+KK+RY +RK+LAE+RPR+RGQFVR+
Sbjct: 700 GKGGGNRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQ 757
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 86/131 (65%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
++ ++ +R+LL ++D ++ + +LL KC Y+V +V + L + IDLIL E+
Sbjct: 35 YLPKTVLRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTEL 94
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L + ++ + IPVIMMS+QD +++V+KC+ GAADYL+KP+R NEL N
Sbjct: 95 DLPSISGFALLALVMENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKN 154
Query: 147 LWTHMWRRRRM 157
LW H+WRR +
Sbjct: 155 LWQHVWRRHSL 165
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 434 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAVN 479
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQ-VTSVRSPRQVIDALNAEGSDIDLILAE 85
F+ R +R+LL + D ++ + +LL KCSY+ V +V + + L +IDLIL E
Sbjct: 59 FLPRMVLRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTE 118
Query: 86 VDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
VDLP G +L I + + IPVIMMS+QD + V KC+ GAADYLVKP+R NEL
Sbjct: 119 VDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELR 178
Query: 146 NLWTHMWRRRRMLG 159
NLW H+WR++ LG
Sbjct: 179 NLWQHVWRKQSSLG 192
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+
Sbjct: 632 QREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 677
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 80/129 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D + + +LL KC+Y+V +V + + L IDLIL EV
Sbjct: 50 FLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEV 109
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IPVIMMS+QD VS V KC+ GAADYLVKP+R NEL N
Sbjct: 110 DLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRN 169
Query: 147 LWTHMWRRR 155
LW H+WRR+
Sbjct: 170 LWQHVWRRQ 178
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+ N
Sbjct: 631 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPN 675
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 82/133 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D ++ + +LL KCSY+V +V + + L + +DLIL EV
Sbjct: 153 FLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEV 212
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IPVIMMS QD V+ V KC+ GAADYLVKPLR NEL N
Sbjct: 213 DLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRN 272
Query: 147 LWTHMWRRRRMLG 159
LW H+WRR+ L
Sbjct: 273 LWQHVWRRQTSLA 285
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 45/51 (88%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
K+ + +REAAL KFR KRK+RC++KK+RY +RK+LAE+RPR++GQFVR+V
Sbjct: 611 KIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 661
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%)
Query: 30 RSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLP 89
R +RILL + D ++ + +LL KCSY+V +V + + L +IDL+L EV+LP
Sbjct: 36 RVALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELP 95
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
G +L I + IPVIMMS+ D ++ V+KC+ GAAD+L+KP+R NEL NLW
Sbjct: 96 SISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQ 155
Query: 150 HMWRRRRMLG 159
H+WRR+ + G
Sbjct: 156 HVWRRQTLTG 165
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRK+RC+DKK+RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 645 QREAALTKFRLKRKDRCYDKKVRYHSRKRLAEQRPRVKGQFVRQV 689
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D + R +R+LL ++D ++ V +LL KC Y+V +V + + + DL+L
Sbjct: 47 DQILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLT 106
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV +P G+++L I E + IPVIMMS+QD + V+KC++ GA D+LVKP+R NEL
Sbjct: 107 EVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNEL 166
Query: 145 LNLWTHMWRRRRM 157
NLW H+WRR M
Sbjct: 167 RNLWQHVWRRHAM 179
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 441 CLQPGQ--VSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKR 498
C G+ ++AN+ + + + ++ RREAAL+KFR KRK+RCF+KK+RY +RK+
Sbjct: 609 CTGSGEADINANTMVALESGNESGIQNGDRSRREAALMKFRMKRKDRCFEKKVRYHSRKK 668
Query: 499 LAERRPRVRGQFV 511
LAE+RPRV+GQFV
Sbjct: 669 LAEQRPRVKGQFV 681
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 85/130 (65%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
+ ++ ++ +R+LL ++D ++ + +LL KC Y+V +V + L + +IDLIL
Sbjct: 29 EKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILT 88
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
E+DLP G +L + + + IPVIMMS+QD + +V+KC+ GAADYL+KP+R NEL
Sbjct: 89 ELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNEL 148
Query: 145 LNLWTHMWRR 154
NLW H+WRR
Sbjct: 149 KNLWQHVWRR 158
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 416 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 461
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 87/128 (67%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
++ ++ +++LL ++D ++ + +LL KCSY+V +V + L + ++IDLIL E+
Sbjct: 20 YLPKTVLKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTEL 79
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L + + + IPVIMMS++D +++V+KC+ GAADYL+KP+R NEL N
Sbjct: 80 DLPAISGFALLALVMEHEACKNIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKN 139
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 140 LWQHVWRR 147
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR V
Sbjct: 361 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAV 405
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 84/128 (65%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL KCSY V SV + D + + + D+IL+EV
Sbjct: 51 FLPRRSLRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEV 110
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
++P G+ +L I + + IPVIMMS+QD VSVV KC++ GA D+LVKP+R NEL N
Sbjct: 111 EVPSFSGISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRN 170
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 171 LWQHVWRR 178
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 65/117 (55%), Gaps = 31/117 (26%)
Query: 429 GMASFPYY---PI---NMC------LQP-----GQVSANSW-PSYGNSPSTEVKMNKVD- 469
GM FP+ PI N C +QP G V S PS G P TE + +++
Sbjct: 371 GMIPFPFTVNSPIPFQNFCPGYGPLVQPVFYQDGGVHEESQTPSPGRRPGTESEEQRIEA 430
Query: 470 ------------RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
REAAL+KFR KRK+RCF+KK+RY +RK LAE+RPRV+GQFVR+
Sbjct: 431 ERSGFDCDPNRSHREAALMKFRLKRKDRCFEKKVRYHSRKMLAEQRPRVKGQFVRQT 487
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KC Y+V + + + L + D+DLIL EV
Sbjct: 27 FLPRMVLRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEV 86
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IPVIMMS+ D VS+V KC+ GAAD+L+KP+R NEL N
Sbjct: 87 DLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRN 146
Query: 147 LWTHMWRRRRM------LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRST 200
LW H+WRR + L L E + A + + +N +S ++ S DD+ T
Sbjct: 147 LWQHVWRRHAISRPPQNLTLPE-----IELGFAAENHAASNDSSGSVASTPKDDECSEKT 201
Query: 201 N 201
+
Sbjct: 202 S 202
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 45/50 (90%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
++ +REAAL KFR KRK+RC++KK+RY +RKRLAE+RPRV+GQFVR+V+
Sbjct: 634 HRTSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQVH 683
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 84/128 (65%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
++ ++ +R+LL ++D ++ + +LL KC Y+V +V + L + +IDLIL E+
Sbjct: 31 YLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTEL 90
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L + + + IPVIMMS+QD + +V+KC+ GAADYL+KP+R NEL N
Sbjct: 91 DLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKN 150
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 151 LWQHVWRR 158
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 424 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRAVN 469
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D F+ +++LL +ND ++ V +LL CSY+VT+V + Q L + ID++L
Sbjct: 87 DSFLPIRSLKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLT 146
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV +P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 147 EVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNEL 206
Query: 145 LNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEI 204
NLW H+WRR + + V S +D + N+T +D++ ST P I
Sbjct: 207 KNLWQHVWRRCHSSSGSGSESGTQTKKSVKSKSNDESENNT----GSSDERDNGSTGPSI 262
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL +ND ++ V +LL CSY+VT+V + L E S IDL+L EVD+P+
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL NLW H+W
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 153 RR 154
RR
Sbjct: 184 RR 185
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
+REAAL+KFR KRKERCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL +ND ++ V +LL CSY+VT+V + L E S IDL+L EVD+P+
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL NLW H+W
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 153 RR 154
RR
Sbjct: 184 RR 185
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
+REAAL+KFR KRKERCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL ++D ++ V +LL CSY+VT+V + Q L + IDL+L EV
Sbjct: 84 FLPVRSIKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEV 143
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P+ G+ +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 144 AMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKN 203
Query: 147 LWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSR 197
LW H+WRR + ++ S +DA N++ SD+ D SR
Sbjct: 204 LWQHVWRRCHSSSGSGSESATHTRKFAKSRSNDACENNSD-SSDENDYGSR 253
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 14/73 (19%)
Query: 456 GNSPSTEVKMNKVDR--------------REAALIKFRQKRKERCFDKKIRYVNRKRLAE 501
GN + + + +DR REAAL KFR KRKERCF+KK+RY +RK+LAE
Sbjct: 688 GNVAAGSIGIGGIDRKSFGNGADEGRLALREAALTKFRLKRKERCFEKKVRYHSRKKLAE 747
Query: 502 RRPRVRGQFVRKV 514
+RPR+RGQFVR++
Sbjct: 748 QRPRIRGQFVRRI 760
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 96/176 (54%), Gaps = 15/176 (8%)
Query: 24 GDG------FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQ-------VTSVRSPRQVID 70
GDG F+ + +R+LL + D ++ + +LL KCSY+ V +V + +
Sbjct: 97 GDGLVTWERFLPKISLRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWE 156
Query: 71 ALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLG 130
L + +DLIL EVDLP G +L I + IPVIMMS QD V+ V KC+ G
Sbjct: 157 MLRGKPESVDLILTEVDLPSISGYALLTLIMEHDLCKNIPVIMMSTQDSVNTVYKCMLKG 216
Query: 131 AADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTT 186
AADYLVKPLR NEL NLW H+WRR+ LA + D L P A+ N++T
Sbjct: 217 AADYLVKPLRRNELRNLWQHVWRRQS--SLAPGSNFPVDESLGQQKPEGASANNST 270
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNG 523
K+ + +REAAL KFR KRKERCF+KK+RY +RK+LAE+RPR++GQFVR+V
Sbjct: 566 KLQQSLQREAALNKFRMKRKERCFEKKVRYESRKKLAEQRPRIKGQFVRQVQSTETSTQE 625
Query: 524 QP 525
P
Sbjct: 626 AP 627
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
D + R +R+LL ++D ++ V +LL KC Y+V +V + + DL+L
Sbjct: 36 DQILPRRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLT 95
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV +P G+++L I E + IPVIMMS+QD + V++C++ GA D+LVKP+R NEL
Sbjct: 96 EVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNEL 155
Query: 145 LNLWTHMWRRRRM---LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTN 201
NLW H+WRR M +E N S + N + T SD+ D +
Sbjct: 156 RNLWQHVWRRHAMNSQTNASENNAASNHL-----SANGGNGSKTGEHSDEESDAQSSGSK 210
Query: 202 PEIGMSTHQETESVPVATATVVASTS 227
E+ + Q E +P A A +S
Sbjct: 211 REVEI---QSAEKLPEVVADGGAGSS 233
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 40/42 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
RREAAL+KFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFV
Sbjct: 643 RREAALLKFRMKRKDRCFEKKVRYHSRKKLAEQRPRVKGQFV 684
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%)
Query: 26 GFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAE 85
G + R VR+LL + D ++ + +LL KC Y+V + + D L + ++DL+L E
Sbjct: 36 GMLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTE 95
Query: 86 VDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
V+LP+ G +L I + IPVIMMS+ D VS+V KC+ GAAD+LVKP+R NEL
Sbjct: 96 VELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELR 155
Query: 146 NLWTHMWRRR 155
NLW H+WR++
Sbjct: 156 NLWQHVWRKQ 165
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 448 SANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVR 507
S+N + +PS E + + +REAAL KFR KRK+RCF+KK+RY +RK LAE+RPRV+
Sbjct: 558 SSNVYKDVPETPSAEGSRH-LSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVK 616
Query: 508 GQFVRKVNGV 517
GQFVR+ + +
Sbjct: 617 GQFVRQDHSI 626
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 80/122 (65%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL +ND ++ V +LL CSY++T+V + L E S IDL+L EVD+P+
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL NLW H+W
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 153 RR 154
RR
Sbjct: 184 RR 185
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
+REAAL+KFR KRKERCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D ++ + +LL C Y+V +VR + + L + DIDL+L EV
Sbjct: 8 FVPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEV 67
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IP+IMMS+QD VS V K + GA D+L+KP+R NEL N
Sbjct: 68 DLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 147 LWTHMWRRRRMLGLAEKNIL--SYDFDLVASDPSDANTNSTTLFS 189
LW H+WRR + + +NI D+ A + + +N +S ++ S
Sbjct: 128 LWQHVWRRNTTITMPPQNITFPQNKLDVAAENNAASNHSSGSVAS 172
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 20/81 (24%)
Query: 456 GNSPSTEVKMNKVD--------------------RREAALIKFRQKRKERCFDKKIRYVN 495
GN+PST V N ++ +REAAL KFR KRK+RC+DKK+RY +
Sbjct: 546 GNAPSTIVGKNNLESSMNNDHHDGLRDTSSHRTSQREAALTKFRLKRKDRCYDKKVRYES 605
Query: 496 RKRLAERRPRVRGQFVRKVNG 516
RKR AE RPRV+GQFVR+V G
Sbjct: 606 RKRQAENRPRVKGQFVRQVQG 626
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL ++D ++ V +LL CSY+VT+V + Q L + IDL+L EV
Sbjct: 67 FLPLRSIKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEV 126
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P+ G+ +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 127 AMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKN 186
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 187 LWQHVWRR 194
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 14/73 (19%)
Query: 456 GNSPSTEVKMNKVDR--------------REAALIKFRQKRKERCFDKKIRYVNRKRLAE 501
GN + + + +DR REAAL KFR KRKERCF+K++RY +RK+LAE
Sbjct: 679 GNVAAGSIGIGGIDRKSIGNGTDEVRLALREAALTKFRLKRKERCFEKRVRYHSRKKLAE 738
Query: 502 RRPRVRGQFVRKV 514
+RPR++GQFVR++
Sbjct: 739 QRPRIKGQFVRRI 751
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 84/145 (57%)
Query: 11 ECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVID 70
E G G + F+ + +R+LL + D + + +LL KC+Y+V +V + +
Sbjct: 23 ETRGGGEVKGLLRWEKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWE 82
Query: 71 ALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLG 130
L + DLIL EVDLP G +L I + IPVIMMS+QD VS V KC+ G
Sbjct: 83 ILKGRPRNFDLILTEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRG 142
Query: 131 AADYLVKPLRTNELLNLWTHMWRRR 155
AADYLVKP+R NEL NLW H+WRR+
Sbjct: 143 AADYLVKPIRINELRNLWQHVWRRQ 167
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 42/45 (93%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+VN
Sbjct: 440 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVN 484
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL +ND ++ V +LL CSY+VT+V + L E S IDL+L EVD+P+
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL NLW H+W
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 153 RR 154
RR
Sbjct: 184 RR 185
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
+REAAL+KFR KRKERCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 468 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 511
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 82/129 (63%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY+V +V + + L A +IDLIL EV
Sbjct: 34 FLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEV 93
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L + + + IPVIMMS+ ++ V KC+ GAAD+LVKP+R NEL N
Sbjct: 94 ELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKN 153
Query: 147 LWTHMWRRR 155
LW H+WRR+
Sbjct: 154 LWQHVWRRQ 162
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 44/48 (91%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGV 517
+REAAL KFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFVR+V+ +
Sbjct: 625 QREAALTKFRLKRKDRCFEKKVRYESRKKLAEQRPRVKGQFVRQVHTI 672
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND+++ V +LL CSY+VT+V + Q L+ + +DL+LAEV
Sbjct: 88 FLPLRSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEV 147
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
LP G+ +L I K + IPVIMMS+ D V +V KCL GA D+ VKP+R NEL N
Sbjct: 148 ALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKN 207
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 208 LWQHVWRK 215
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
V N+ +REAAL KFRQKRKERCF+KK+RY +RKRLAE+RPR+RGQFVR+V
Sbjct: 707 VDQNQYAQREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRRV 758
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 82/128 (64%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND+++ V +LL CSY+VT+V + Q L+ + +DL+LAEV
Sbjct: 66 FLPLRSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEV 125
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
LP G+ +L I K + IPVIMMS+ D V +V KCL GA D+ VKP+R NEL N
Sbjct: 126 ALPSLSGIGLLCKIMNHKACKNIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKN 185
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 186 LWQHVWRK 193
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
V N+ +REAAL KFRQKRKERCF+KK+RY +RKRLAE+RPR+RGQFVR+V
Sbjct: 685 VDQNQYAQREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRIRGQFVRRV 736
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 75/115 (65%)
Query: 41 DSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYI 100
D ++ + +LL KCSY+VT+V + + L +IDLIL EVDLP G +L I
Sbjct: 70 DDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALLTLI 129
Query: 101 TRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 155
+ + IPVIMMSAQD VS V KC+ GAADYLVKP+R NEL NLW H+WR++
Sbjct: 130 AEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQ 184
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 49/60 (81%), Gaps = 5/60 (8%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVD 529
+REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+ ++ PS +D
Sbjct: 638 QREAALAKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH-----IDPSPSEID 692
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
+ R VR+LL + D ++ + +LL KC Y+V + + D L + +IDL+L EV
Sbjct: 38 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 97
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP+ G +L I + IPVIMMS+ D VS+V KC+ GAAD+LVKPLR NEL N
Sbjct: 98 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRN 157
Query: 147 LWTHMWRRR 155
LW H+WR++
Sbjct: 158 LWQHVWRKQ 166
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 446 QVSANSWPS---YGNSPSTEVK--MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLA 500
Q++A++ PS Y P T + + +REAAL KFR KRK+RCF+KK+RY +RK LA
Sbjct: 551 QITASTEPSSNVYRGVPETARAEGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLA 610
Query: 501 ERRPRVRGQFVRKVNGV 517
E+RPRV+GQFVR+ + +
Sbjct: 611 EQRPRVKGQFVRQDHSI 627
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 80/129 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D + + +LL KC+Y+V +V + + L + DLIL EV
Sbjct: 14 FLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEV 73
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP G +L I + IPVIMMS+QD VS V KC+ GAADYLVKP+R NEL N
Sbjct: 74 DLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRN 133
Query: 147 LWTHMWRRR 155
LW H+WRR+
Sbjct: 134 LWQHVWRRQ 142
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 42/45 (93%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+VN
Sbjct: 415 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVN 459
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 83/134 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
+ R VR+LL + D ++ + +LL KC Y+V + + D L + +IDL+L EV
Sbjct: 37 MLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 96
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP+ G +L I + IPVIMMS+ D VS+V KC+ GAAD+LVKP+R NEL N
Sbjct: 97 ELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRN 156
Query: 147 LWTHMWRRRRMLGL 160
LW H+WR++ G+
Sbjct: 157 LWQHVWRKQLSSGV 170
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGV 517
+ + +REAAL KFR KRK+RCF+KK+RY +RK LAE+RPRV+GQFVR+ +GV
Sbjct: 568 LRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDHGV 620
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +R+LL + D ++ + +LL KC Y+V++V + L IDLIL EV
Sbjct: 38 FLPKMVLRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEV 97
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP+ G L + + IPVIMMS+ D +SVV+KC+ G+AD+LVKP+R NEL N
Sbjct: 98 ELPLISGYAFLALVMEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRN 157
Query: 147 LWTHMWRRR------------RMLGLAEKNILSYDF 170
LW H+WRR+ R+ +E N S DF
Sbjct: 158 LWQHVWRRQTQTAGKIPRNSNRVEASSENNAASSDF 193
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 41/45 (91%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRK+RC++K++RY +RKRLAE+RPRV+GQFVR+
Sbjct: 641 QREAALTKFRLKRKDRCYEKRVRYQSRKRLAEQRPRVKGQFVRQA 685
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 13 SGAGIGNSKSS----GDGFID---RSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSP 65
+GAGIG G+G+ + ++++LL ++D ++ V +LL C YQV +
Sbjct: 15 AGAGIGGESGKLSQRGEGWENLPPYRQLKVLLVEDDDSTRHVVAALLRNCGYQVVPAANG 74
Query: 66 RQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVK 125
Q L+ +IDL+L +V +P GL +L I K Q++PV+MMS+ D +VV K
Sbjct: 75 LQAWSLLDDRNREIDLVLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFK 134
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRR 156
CL GAAD+LVKP+R NEL NLW H WR+ R
Sbjct: 135 CLTKGAADFLVKPVRKNELKNLWQHAWRKAR 165
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 458 SPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
+P+ N RREAAL KFRQKRKERCF+KK+RY +RKRLAE+RPRVRGQFV
Sbjct: 579 APAENAANNSKVRREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFV 632
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 82/129 (63%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY+V +V + + L A +IDLIL EV
Sbjct: 34 FLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEV 93
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L + + + IPVIMMS+ ++ V KC+ GAAD+LVKP+R NEL N
Sbjct: 94 ELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKN 153
Query: 147 LWTHMWRRR 155
LW H+WRR+
Sbjct: 154 LWQHVWRRQ 162
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 44/48 (91%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGV 517
+REAAL KFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFVR+V+ +
Sbjct: 559 QREAALTKFRLKRKDRCFEKKVRYESRKKLAEQRPRVKGQFVRQVHTI 606
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 83/134 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
+ R VR+LL + D ++ + +LL KC Y+V + + D L + +IDL+L EV
Sbjct: 37 MLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 96
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP+ G +L I + IPVIMMS+ D VS+V KC+ GAAD+LVKP+R NEL N
Sbjct: 97 ELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRN 156
Query: 147 LWTHMWRRRRMLGL 160
LW H+WR++ G+
Sbjct: 157 LWQHVWRKQLSSGV 170
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 465 MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGV 517
+ + +REAAL KFR KRK+RCF+KK+RY +RK LAE+RPRV+GQFVR+ +GV
Sbjct: 568 LRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQDHGV 620
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY V +V + + L + ++DLIL EV
Sbjct: 23 FLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEV 82
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L I + IPVIMMS+ D VS+ +KC+ GA D+L+KP+R NEL N
Sbjct: 83 ELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRN 142
Query: 147 LWTHMWRRRRM 157
LW H+WRR +
Sbjct: 143 LWQHVWRRHAI 153
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 43/48 (89%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
++ +REA L+KFR KRKERCF+KK+RY +RKRLAE+RPRV+GQFVR+
Sbjct: 663 HRSSQREAVLVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQ 710
>gi|147811962|emb|CAN63719.1| hypothetical protein VITISV_005736 [Vitis vinifera]
Length = 255
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 84/125 (67%), Gaps = 7/125 (5%)
Query: 52 LVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPV 111
L+ +Y+VTSV S R+VI LN EG+ ID++LAE DLPM +K LKYIT+D+EL+ IPV
Sbjct: 114 LMPXAYRVTSVGSTREVIYVLNCEGASIDIVLAEADLPMANSMKTLKYITQDQELRCIPV 173
Query: 112 IMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFD 171
+ D K L +DYL+ PL +N L NLWTH+WR RRMLGL EKNI DF+
Sbjct: 174 MRQHLHDR-----KVLD-AWSDYLMMPLGSNVLFNLWTHVWRTRRMLGLPEKNIFHSDFE 227
Query: 172 -LVAS 175
VAS
Sbjct: 228 RFVAS 232
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 83/128 (64%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D + V +LL KCSY V +V + D + + + D+IL+EV
Sbjct: 67 FLPRRSLRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEV 126
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
++P G+ +L I + + IPVIMMS+QD VSVV KC++ GA D+LVKP+R NEL N
Sbjct: 127 EVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRN 186
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 187 LWQHVWRR 194
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
REAAL+KFR KRK+RCF+KK+RY +RK LAE+RPRV+GQFVR+
Sbjct: 443 REAALMKFRLKRKDRCFEKKVRYHSRKMLAEQRPRVKGQFVRQA 486
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KCSY V +V + + L + ++DLIL EV
Sbjct: 23 FLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEV 82
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L I + IPVIMMS+ D VS+ +KC+ GA D+L+KP+R NEL N
Sbjct: 83 ELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRN 142
Query: 147 LWTHMWRRRRM 157
LW H+WRR +
Sbjct: 143 LWQHVWRRHAI 153
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
+REA L+KFR KRKERCF+KK+RY +RKRLAE+RPRV+GQFVR+
Sbjct: 648 QREAVLVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQ 691
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 81/129 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
+ R VR+LL + D ++ + +LL KC Y+V + + D L + +IDL+L EV
Sbjct: 38 MLPRMPVRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEV 97
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP+ G +L I + IPVIMMS+ D VS+V KC+ GA+D+LVKPLR NEL N
Sbjct: 98 ELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRN 157
Query: 147 LWTHMWRRR 155
LW H+WR++
Sbjct: 158 LWQHVWRKQ 166
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
Query: 446 QVSANSWPS---YGNSPSTEVK--MNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLA 500
Q++A + PS Y P T + + +REAAL KFR KRK+RCF+KK+RY +RK LA
Sbjct: 517 QITAPTEPSSNVYRGVPETARAEGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLA 576
Query: 501 ERRPRVRGQFVRKVNGV 517
E+RPRV+GQFVR+ + +
Sbjct: 577 EQRPRVKGQFVRQDHSI 593
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 83/131 (63%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL + D ++ + +LL KCSY+V +V + L ++IDLIL EV
Sbjct: 35 FLPNMVLRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEV 94
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
DLP+ G +L + + IPVIMMS+ D +S V+KC+ GAAD+L+KP+R NEL N
Sbjct: 95 DLPLISGYALLTLVMEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKN 154
Query: 147 LWTHMWRRRRM 157
LW H+WRR+ +
Sbjct: 155 LWQHVWRRQTL 165
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 43/49 (87%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
++ +REAAL KFR KRK+RC++KK+RY +RKRLAE RPRV+GQFVR+V
Sbjct: 636 DRFSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAELRPRVKGQFVRQV 684
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 79/122 (64%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL +ND ++ V +LL CSY+VT+V + L E S IDL+L EV +P+
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVVMPVNS 123
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I + L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL NLW H+W
Sbjct: 124 GTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 153 RR 154
RR
Sbjct: 184 RR 185
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 44/46 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRKERCF+KK+RY +RK+LAE+RPR++GQF+RK++
Sbjct: 425 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPRIKGQFIRKMD 470
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 80/128 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL CSY+V +V + Q L + DL+L EV
Sbjct: 68 FLPVRSLKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEV 127
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P+ G+ +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 128 VMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKN 187
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 188 LWQHVWRR 195
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 46/52 (88%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
V +++ +REAAL KFRQKRKERCF+K++RY +RKRLAE+RPRV+GQFVR+
Sbjct: 700 VDEDRLAQREAALSKFRQKRKERCFEKRVRYQSRKRLAEQRPRVKGQFVRQT 751
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 78/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L ++IDL+L EV
Sbjct: 77 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEV 136
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS D +S+V KCL GA D+LVKPLR NEL N
Sbjct: 137 FMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKN 196
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 197 LWQHVWRR 204
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 78/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L ++IDL+L EV
Sbjct: 77 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEV 136
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS D +S+V KCL GA D+LVKPLR NEL N
Sbjct: 137 FMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKN 196
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 197 LWQHVWRR 204
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
N+ +REAAL KFR KRK+R F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 706 NRFLQREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 753
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 81/128 (63%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL CSY+VT+V + + L +++D++L EV
Sbjct: 71 FLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEV 130
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 131 VMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKN 190
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 191 LWQHVWRR 198
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
V ++ +R AAL KFRQKRK+RCF KK+RY +RK+LAE+RPR+RGQF++
Sbjct: 555 VDESRFAQRVAALTKFRQKRKQRCFQKKVRYQSRKKLAEQRPRIRGQFIK 604
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 78/122 (63%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL +ND ++ V +LL CSY+V +V + L E S IDL+L EV LP+
Sbjct: 66 LKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVVLPVHS 125
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I K L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL NLW H+W
Sbjct: 126 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 185
Query: 153 RR 154
R+
Sbjct: 186 RK 187
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 26/115 (22%)
Query: 410 NHSMLPQYNH------------LPQCVPHVNGMASFPYYPINMCLQPGQVSANSWPSYGN 457
NHS +YN+ + C PH + P+ L G S N P
Sbjct: 385 NHSPFSKYNNDATSANKAPEENMGSCSPHGS--------PVGKLLGSGSSSDN--PLNQQ 434
Query: 458 SPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
S ++ + +REAAL+KFR KRKERCF+KK+RY +RK+LAE+RPRV+GQF+R
Sbjct: 435 SSGSD----RSAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPRVKGQFIR 485
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 78/123 (63%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
VR+LL + D ++ + +LL KC Y V + + + L + +IDL+L EV+LP
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVELPAMS 98
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L I + + IPVIMMS+ D VS+V KC+ GAAD+LVKP+R NEL NLW H+W
Sbjct: 99 GFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVW 158
Query: 153 RRR 155
R++
Sbjct: 159 RKQ 161
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 450 NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQ 509
NS+ +PS + + + +RE AL KFR KRKERCF+KK+RY +RK LAE+RPRV+GQ
Sbjct: 557 NSFNGVPENPSMD-GTHHLSQREVALNKFRLKRKERCFEKKVRYQSRKLLAEQRPRVKGQ 615
Query: 510 FVRK 513
FVR+
Sbjct: 616 FVRQ 619
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 84/135 (62%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
+ F+ +VR+LL + D ++ V +LL KCSY+V+S + L ++IDL+L
Sbjct: 23 EKFLRGMRVRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVLT 82
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV+LP G +L + + IPVIMMS++D + +V +C+ GAAD+LVKP+R NEL
Sbjct: 83 EVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNEL 142
Query: 145 LNLWTHMWRRRRMLG 159
NLW H+WRR+ G
Sbjct: 143 RNLWQHVWRRQSANG 157
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 81/128 (63%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL CSY+VT+V + + L +++D++L EV
Sbjct: 71 FLPVKSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEV 130
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I L+ IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 131 VMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKN 190
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 191 LWQHVWRR 198
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
+R AAL KFRQKRK+RCF KK+RY +RK+LAE+RPR+RGQF +
Sbjct: 568 QRVAALTKFRQKRKQRCFQKKVRYQSRKKLAEQRPRIRGQFAK 610
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 8/68 (11%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
N V REAAL KFRQKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ
Sbjct: 729 NGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQE 780
Query: 526 SSVDYDED 533
DED
Sbjct: 781 DQAGQDED 788
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 8/68 (11%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
N V REAAL KFRQKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ
Sbjct: 707 NGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQE 758
Query: 526 SSVDYDED 533
DED
Sbjct: 759 DQAGQDED 766
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 8/68 (11%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
N V REAAL KFRQKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ
Sbjct: 707 NGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQE 758
Query: 526 SSVDYDED 533
DED
Sbjct: 759 DQAGQDED 766
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +++LL +ND ++ V +LL C Y+ T+V + Q L + IDL+L EV
Sbjct: 83 FLPRRSLKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEV 142
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D ++VV +CL GA D+LVKP+R NEL
Sbjct: 143 AMPCLSGIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKI 202
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 203 LWQHVWRR 210
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 41/44 (93%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
REAAL KFRQKRKERCF+KK+RY +RK+LAE RPRVRGQFVR+V
Sbjct: 709 REAALNKFRQKRKERCFEKKVRYQSRKKLAEHRPRVRGQFVRQV 752
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 8/68 (11%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
N V REAAL KFRQKRK R F KK+RY +RKRLAE+RPR+RGQFVR+ +GQ
Sbjct: 707 NGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--------SGQE 758
Query: 526 SSVDYDED 533
DED
Sbjct: 759 DQAGQDED 766
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL C Y+VT+V + Q L + IDL+L EV
Sbjct: 86 FLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEV 145
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D ++VV KCL GA D+LVKP+R NEL
Sbjct: 146 AMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKI 205
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 206 LWQHVWRK 213
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 445 GQVSANSWPSYGNSPSTE--VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAER 502
G V P G+ + V N+ REAAL KFRQKRKERCF+KK+RY +RK+LAE+
Sbjct: 684 GAVEKGGTPGPGDESGSRSGVGRNRFALREAALSKFRQKRKERCFEKKVRYQSRKKLAEQ 743
Query: 503 RPRVRGQFVRKV 514
RPR+RGQFVR+V
Sbjct: 744 RPRIRGQFVRQV 755
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL C Y+VT+V + Q L + IDL+L EV
Sbjct: 31 FLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEV 90
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D ++VV KCL GA D+LVKP+R NEL
Sbjct: 91 AMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKI 150
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 151 LWQHVWRK 158
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 445 GQVSANSWPSYGNSPSTE--VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAER 502
G V P G+ + V N+ REAAL KFRQKRKERCF+KK+RY +RK+LAE+
Sbjct: 629 GAVEKGGTPGPGDESGSRSGVGRNRFALREAALSKFRQKRKERCFEKKVRYQSRKKLAEQ 688
Query: 503 RPRVRGQFVRKV 514
RPR+RGQFVR+V
Sbjct: 689 RPRIRGQFVRQV 700
>gi|238013640|gb|ACR37855.1| unknown [Zea mays]
Length = 205
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 92/157 (58%), Gaps = 13/157 (8%)
Query: 371 TRNEPPQATYQYYMSGAMNQVMLPSSSAQMYQKNLHELQNHS---MLPQYNHLPQCVPHV 427
T PP + +Y G + M SSAQ +Q N++ Q H+ MLPQYN PQC
Sbjct: 27 TSGTPPAYHFPFYYPGMVEHNMA-LSSAQDFQANINNAQAHTPPAMLPQYNVYPQC---- 81
Query: 428 NGMA---SFPYYPINMCLQPGQV-SANSWPSYGNSPST-EVKMNKVDRREAALIKFRQKR 482
+G+ SF + P M + + N W S ++P E ++ +RR AAL KFR KR
Sbjct: 82 HGLPVIPSFQFNPSGMSTHSSHLPTQNVWSSASSTPPVPEETCSRSERRAAALAKFRLKR 141
Query: 483 KERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
KERCFDKK+RYVNRK+LAE RPRVRGQFVR+ +V
Sbjct: 142 KERCFDKKVRYVNRKKLAETRPRVRGQFVRQPTNTDV 178
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI + +++LL D+D ++ V +LL C Y+V + +Q L + IDL+L EV
Sbjct: 56 FIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 115
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 116 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 175
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 176 LWQHVWRR 183
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 469 DRREAALIKFRQKRKERCFDKKIRY 493
+ R AA+IKFRQKRKER F KK+RY
Sbjct: 680 EHRVAAVIKFRQKRKERNFGKKVRY 704
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI + +++LL D+D ++ V +LL C Y+V + +Q L + IDL+L EV
Sbjct: 55 FIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 114
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 115 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 174
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 175 LWQHVWRR 182
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI + +++LL D+D ++ V +LL C Y+V + +Q L + IDL+L EV
Sbjct: 56 FIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 115
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 116 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 175
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 176 LWQHVWRR 183
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 469 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+ R AA+IKFRQKRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 680 EHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI + +++LL D+D ++ V +LL C Y+V + +Q L + IDL+L EV
Sbjct: 56 FIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 115
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 116 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 175
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 176 LWQHVWRR 183
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 469 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+ R AA+IKFRQKRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 680 EHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI + +++LL D+D ++ V +LL C Y+V + +Q L + IDL+L EV
Sbjct: 56 FIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 115
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 116 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 175
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 176 LWQHVWRR 183
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 469 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+ R AA+IKFRQKRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 680 EHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 725
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL CSY+V + + L + IDL+L EV
Sbjct: 83 FLHLRSLKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEV 142
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 143 VMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 202
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 203 LWQHVWRR 210
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 462 EVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
++ NKV +REAAL KFRQKRKERCF KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 731 QMDQNKVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQ 782
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 81/129 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL KC Y+V+S + L + +D DL+L EV
Sbjct: 25 FLPRMFLRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTDLVLTEV 84
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L + + + IPVIMMS+ D + +V +C+ GAAD+LVKP+R NEL N
Sbjct: 85 ELPNVSGYALLSMMMEHETCKSIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRN 144
Query: 147 LWTHMWRRR 155
LW H+WRR+
Sbjct: 145 LWQHVWRRQ 153
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 42/45 (93%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
REAAL KFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFVR+VN
Sbjct: 413 REAALTKFRLKRKDRCFEKKVRYQSRKKLAEQRPRVKGQFVRQVN 457
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 74/128 (57%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL KC Y+V S + L + IDL+L EV
Sbjct: 76 FLPVKTLRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEV 135
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS D + V KCL GA D+LVKP+R NEL N
Sbjct: 136 AMPCLSGISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 195
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 196 LWQHIWRR 203
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
N++ +REAA+ KFRQKRKER F KK+ Y +RKRLAE+RPRVRGQFV++
Sbjct: 706 NQLSQREAAVNKFRQKRKERNFGKKVLYQSRKRLAEQRPRVRGQFVKQ 753
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L ++IDL+L EV
Sbjct: 76 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEV 135
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+ G+ +L IT K + IPVIMMS D +S+V KCL GA D+LVKPLR NEL N
Sbjct: 136 FMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKN 195
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 196 LWQHVWRR 203
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
N+ +REAAL KFR KRK+R F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 705 NRFLQREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 752
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL CSY+V + Q L + IDL+L EV
Sbjct: 82 FLHLGSLKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEV 141
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + +PVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 142 VMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 201
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 202 LWQHVWRR 209
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK +RE AL KFRQKRKERCF KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 703 NKFSQREVALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQT 751
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL CSY+V + + L + IDL+L EV
Sbjct: 83 FLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEV 142
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 143 VMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 202
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 203 LWQHVWRR 210
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 462 EVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
++ NKV +REAAL KFRQKRKERCF KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 731 QMDQNKVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQ 782
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ VR+LL +ND ++ V +LL C Y+V + Q L + IDL+L EV
Sbjct: 78 FLHVRSVRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEV 137
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + +PV+MMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 138 VMPCVSGIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 197
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 198 LWQHLWRR 205
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 461 TEVKMNKVDRREAALIKFRQKRKERCFDKKIR 492
++V +K+ +RE AL KFRQKRKERCF +K+R
Sbjct: 687 SKVDHSKLAQRETALTKFRQKRKERCFKRKVR 718
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND ++ V +LL KC Y+V + L + IDL+L EV
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 135 VMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 78/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL +ND ++ V +LL C Y+VT+ + Q L + +DL+L EV
Sbjct: 92 FLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEV 151
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D +++V KCL GA D+L KP+R NEL N
Sbjct: 152 VMPCLSGIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKN 211
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 212 LWQHVWRK 219
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
++V REAAL KFRQKRKERCF+KK+RY +RK+LAE+RPRVRGQFVR+V
Sbjct: 725 DRVALREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQV 773
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 16 GIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAE 75
G G+ + F+ + +R+LL + D ++ + +LL KCSY+V +V + + L +
Sbjct: 35 GGGDGLVKWERFLPKIALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGK 94
Query: 76 GSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYL 135
+DLIL EVDLP G +L I + IPVI + D V+ V KC+ GAADYL
Sbjct: 95 PESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVI---STDSVNTVYKCMLKGAADYL 151
Query: 136 VKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTT------LFS 189
VKPLR NEL NLW H+WRR+ L S+ D P A+ N++ +
Sbjct: 152 VKPLRRNELRNLWQHVWRRQTSLAPD-----SFPLDERQQKPEGASANNSNGKREEHVVI 206
Query: 190 DDTDDKSRRSTNPEI-GMSTHQET---ESVPVATATVVASTSGTAAVEPIDASECGPDVP 245
+ D T PE+ G S E ++V + A + + A E ++S+ D+
Sbjct: 207 GNGGDAQSSCTRPEMEGESADVEVNARDAVQMECAKSQFNETRLLANEMQNSSKKAIDLM 266
Query: 246 GISDRRTA 253
G S RRT
Sbjct: 267 GASFRRTG 274
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 44/51 (86%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
K + +REAAL KFR KRK+RCF+KK+RY +RK+LAE+RPR++GQFVR+V
Sbjct: 499 KFQQSLQREAALTKFRMKRKDRCFEKKVRYESRKKLAEQRPRIKGQFVRQV 549
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 78/129 (60%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K R+LL +ND ++ + +LL C YQVT + Q L + IDL+L EV+LP
Sbjct: 57 KSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRL 116
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G+ +L I K + IPVIMMS D ++V+KCL GA D+LVKP+R NEL LW H+
Sbjct: 117 SGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHI 176
Query: 152 WRRRRMLGL 160
WRRR+ G
Sbjct: 177 WRRRQNNGF 185
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPR RGQFV++
Sbjct: 719 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 762
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 74/128 (57%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL KC Y+V S + L + IDL+L EV
Sbjct: 77 FLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEV 136
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT + IPVIMMS D +S V KCL GA D+LVKP+R NEL
Sbjct: 137 AMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 196
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 197 LWQHIWRR 204
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
V N++ +REAA+ KFRQKRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 696 VCQNQLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 746
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
+I + +R+LL + D ++ V +LL C YQV + Q L +IDL+L+EV
Sbjct: 15 YIHKKIIRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEV 74
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L+ I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 75 VMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKN 134
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 135 LWQHVWRR 142
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 460 STEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S+ + K + R AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 598 SSSIMYMKRELRVAAVTKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 651
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPR RGQFV++
Sbjct: 703 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 746
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVKPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPR RGQFV++
Sbjct: 705 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 748
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL CSY+V V + Q L + ID++L EV
Sbjct: 78 FLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEV 137
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 138 VMPYLSGISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKI 197
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 198 LWQHVWRR 205
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK+ +REAAL KFRQ+RKERCF KK+RY +RK+LAE+RPRVRGQFVRK
Sbjct: 665 NKISQREAALTKFRQRRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 713
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI + +++LL ++D ++ V +LL C Y+V + +Q L + IDL+L EV
Sbjct: 55 FIQKKTIKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEV 114
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LVKP+R NEL N
Sbjct: 115 VMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKN 174
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 175 LWQHVWRR 182
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL CSY+V V + Q L + ID++L EV
Sbjct: 68 FLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEV 127
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 128 VMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKI 187
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 188 LWQHVWRR 195
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK+ +REAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRGQFVRK
Sbjct: 641 NKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 689
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL + D ++ V +LL CSY+V + Q L + IDLIL EV
Sbjct: 75 FLHIRSLKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEV 134
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPV+MMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 135 AMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 194
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 195 LWQHVWRR 202
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 449 ANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKER---CFDKKIRYVNRKRLAERRPR 505
+ S + G+ + V NK +REAAL KFRQKRKER CF KK+RY +RKRLAE+RPR
Sbjct: 669 SGSGDASGSVSANRVDQNKTSQREAALTKFRQKRKERRERCFHKKVRYQSRKRLAEQRPR 728
Query: 506 VRGQFVRK 513
RGQFVR+
Sbjct: 729 FRGQFVRQ 736
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQ----VTSVRSPRQVIDALNAEGS----- 77
F+ +R+LL +ND ++ V +LL KC Y+ + R P VI A N +
Sbjct: 75 FLPVKTLRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLE 134
Query: 78 ----DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
IDL+L EV +P G+ +L IT K + IPVIMMS+ D + V KCL GA D
Sbjct: 135 DLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 194
Query: 134 YLVKPLRTNELLNLWTHMWRR 154
+LVKP+R NEL NLW H+WRR
Sbjct: 195 FLVKPIRKNELKNLWQHVWRR 215
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 8/72 (11%)
Query: 462 EVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDL 521
++ N V REAAL KFRQKRK R F KK+RY +RKRLAE+RPR+RGQFVR+
Sbjct: 716 DLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ-------- 767
Query: 522 NGQPSSVDYDED 533
+GQ DED
Sbjct: 768 SGQEDQAGQDED 779
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL CSY+V + Q L + ID++L EV
Sbjct: 79 FLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEV 138
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 139 IMPYLSGISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKI 198
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 199 LWQHVWRR 206
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 45/49 (91%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK+ +REAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRGQFVRK+
Sbjct: 670 NKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKI 718
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL CSY+V V + Q L + ID++L EV
Sbjct: 89 FLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEV 148
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + ++ KCL GA D+LVKP+R NEL
Sbjct: 149 VMPYLSGVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAVDFLVKPIRKNELKI 208
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 209 LWQHVWRR 216
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK+ +REAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRGQFVRK
Sbjct: 662 NKMSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 710
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ + +LL KC + +V + + L + S++DLIL EV
Sbjct: 26 FLPRMVLRVLLVEADHSTRQIIAALLRKC---IIAVPDGLKAWETLKKKASELDLILTEV 82
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+LP G +L I + IPVIMMS+ D V++ +KC+ GA D+L+KP+R NEL N
Sbjct: 83 ELPAISGFALLSLIMEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRN 142
Query: 147 LWTHMWRRRRML 158
LW H+WRR ++
Sbjct: 143 LWQHVWRRHTII 154
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRKERCF+KK+RY +RKRLAE+RPRV+GQFVR+ N
Sbjct: 651 QREAALVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQHN 696
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 75/121 (61%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL ++D ++ V +LL C Y+VT S Q + L S +DL+L ++ +P
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G+++L I +RIPV+MMS D + VV+KCL GA D+LVKP+R NEL NLW H W
Sbjct: 169 GIELLGKIMSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHFW 228
Query: 153 R 153
R
Sbjct: 229 R 229
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPS 526
++ RRE AL KFRQKRKERCF+KK+RY +RKRLAE+RPR++ K+N N +
Sbjct: 772 RLTRREVALYKFRQKRKERCFEKKVRYQSRKRLAEQRPRIK----TKINDNNEAPEDHLT 827
Query: 527 SVDYDEDEDEEEEMASRD 544
S DE+E +E+ RD
Sbjct: 828 SKHQDEEELSRKELLGRD 845
>gi|159475341|ref|XP_001695777.1| hypothetical protein CHLREDRAFT_174408 [Chlamydomonas reinhardtii]
gi|158275337|gb|EDP01114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2212
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 26 GFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL-NAE-GSDIDLIL 83
G + SK+RIL+ D+ + S LL +C+YQVT+V++ R+ + L AE G++ DL+L
Sbjct: 1496 GLPEPSKLRILVVDSKAVSRQTTTQLLRECAYQVTAVKTAREGLQKLIEAEHGANFDLVL 1555
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
E + P ++LK + + + L R PV++ S+QDE V+ CL LGA DYL+KPLR NE
Sbjct: 1556 KEHEPPSANACRLLKRMAKTEGLTRTPVVVTSSQDERETVMSCLSLGAIDYLIKPLRQNE 1615
Query: 144 LLNLWTHMWRRRRMLG 159
L ++WT +W R+ G
Sbjct: 1616 LRHIWTRVWWWRKSQG 1631
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPR 505
RR AL K+R+KRK F K IRY +RK+LA++RPR
Sbjct: 1992 RRALALDKYRKKRKNLRFSKTIRYESRKQLAQQRPR 2027
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LV P+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPR RGQFV++
Sbjct: 719 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 762
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LV P+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPR RGQFV++
Sbjct: 705 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 748
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LV P+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPR RGQFV++
Sbjct: 703 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRFRGQFVKQA 746
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL CSY+V + Q L + ID++L EV
Sbjct: 72 FLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEV 131
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 132 IMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKI 191
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 192 LWQHVWRR 199
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK+ +REAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRGQFVRK
Sbjct: 664 NKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 712
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 617 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 617 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 620 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 666
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 620 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 666
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +++LL ++D + V +LL C+Y+VT V + L S+ DL+L +V
Sbjct: 300 FLLKRNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDV 359
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L + + + +R+P+++MS+ D + +V +CL GA DYLVKP+R NEL N
Sbjct: 360 VMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKN 419
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 420 LWQHVWRK 427
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKK 490
S GN TE + RREAAL KFRQKRKERCF+KK
Sbjct: 969 SGGNGLCTE--QMRFARREAALNKFRQKRKERCFEKK 1003
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 620 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 666
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +++LL + D ++ V +LL CSY+V + Q L + IDL+L EV
Sbjct: 73 FLHIRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEV 132
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPV+MMS+ D + +V KCL GA D+LVKP+R NEL N
Sbjct: 133 AMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 192
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 193 LWQHVWRR 200
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 463 VKMNKVDRREAALIKFRQKRKER---CFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNV 519
V NK +RE AL KFRQKRKER CF KK+RY +RKRLAE+RPR RGQFVR+ + N
Sbjct: 681 VDQNKTSQREVALTKFRQKRKERRERCFHKKVRYQSRKRLAEQRPRFRGQFVRQTSNENA 740
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 618 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 618 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 618 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 618 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 617 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 617 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 663
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 618 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 664
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 667
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 619 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 665
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +++LL ++D + V +LL C+Y+VT V + L S+ DL+L +V
Sbjct: 180 FLLKRNLKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDV 239
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L + + + +R+P+++MS+ D + +V +CL GA DYLVKP+R NEL N
Sbjct: 240 VMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKN 299
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 300 LWQHVWRK 307
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GN TE + RREAAL KFRQKRKERCF+KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 849 SGGNGLCTE--QMRFARREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVRQ 906
Query: 514 V 514
Sbjct: 907 A 907
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 621 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 667
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 668
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 668
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV V + Q L S+IDL+L EV
Sbjct: 37 FLHRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEV 96
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 97 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 156
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 157 NLWAHVWRR 165
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 622 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 668
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +RILL + D + V +LL C Y+VT+V + L S+ DL+L +V
Sbjct: 177 FLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDV 236
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L + + + +R+P+++MS+ D + +V +CL GA DYLVKP+R NEL N
Sbjct: 237 VMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRN 296
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 297 LWQHVWRK 304
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GN TE + RREAAL KFRQKRKERCF+KK+RY +RK+LAE+RPRVRG FVR+
Sbjct: 839 SGGNGLCTE--QIRFARREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGLFVRQ 896
Query: 514 V 514
Sbjct: 897 A 897
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +RILL + D + V +LL C Y+VT+V + L S+ DL+L +V
Sbjct: 177 FLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDV 236
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L + + + +R+P+++MS+ D + +V +CL GA DYLVKP+R NEL N
Sbjct: 237 VMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRN 296
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 297 LWQHVWRK 304
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GN TE + RREAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRG FVR+
Sbjct: 839 SGGNGLCTE--QIRFARREAALNKFRQKRKERCFGKKVRYQSRKKLAEQRPRVRGLFVRQ 896
Query: 514 V 514
Sbjct: 897 A 897
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 25 FLHRKTIRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 84
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 85 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 144
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 145 NLWAHVWRR 153
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 26 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 85
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 86 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 145
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 146 NLWAHVWRR 154
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 606 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 652
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 655
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ ++LL ++D ++ V +LL KCSY+V V + + L + IDL+L EV
Sbjct: 90 FLPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEV 149
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G+ +L I K Q PVIMMS+ D + +V+KCL GA D+LVKP+R NEL N
Sbjct: 150 VTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKN 209
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 210 LWQHVWRR 217
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRKERCFDKK+RY +RK+LA++RPRVRGQFVR+V
Sbjct: 734 QREAALNKFRLKRKERCFDKKVRYQSRKKLADQRPRVRGQFVRQV 778
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 25 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 84
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 85 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 144
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 145 NLWAHVWRR 153
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 25 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 84
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 85 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 144
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 145 NLWAHVWRR 153
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 25 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 84
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 85 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 144
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 145 NLWAHVWRR 153
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 605 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 651
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 26 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 85
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 86 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 145
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 146 NLWAHVWRR 154
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR
Sbjct: 604 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 649
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 26 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 85
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 86 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 145
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 146 NLWAHVWRR 154
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR
Sbjct: 604 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 649
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFV++
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVQQ 655
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 604 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 650
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +RILL + D + V +LL C Y+VT+V + L S+ DL+L +V
Sbjct: 6 FLLKRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDV 65
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L + + + +R+P+++MS+ D + +V +CL GA DYLVKP+R NEL N
Sbjct: 66 VMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRN 125
Query: 147 LWTHMWRR 154
LW H+WR+
Sbjct: 126 LWQHVWRK 133
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GN TE + RREAAL KFRQKRKERCF+KK+RY +RK+LAE+RPRVRG FVR+
Sbjct: 357 SGGNGLCTE--QIRFARREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGLFVRQ 414
Query: 514 V 514
Sbjct: 415 A 415
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 655
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 606 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 652
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 655
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 655
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 655
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 610 KRERRMAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%)
Query: 21 KSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
++ + F+ + + +LL ++D ++ V +LL C YQV S + +Q L + ++ID
Sbjct: 39 QACWERFLLKETLNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNID 98
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
L+L EV +P G+ +L I + IPVIMMS+ D +S V KCL GA D+LVKP+R
Sbjct: 99 LVLTEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIR 158
Query: 141 TNELLNLWTHMWRRR 155
NEL NLW H+WR+R
Sbjct: 159 KNELKNLWQHVWRQR 173
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPV+MMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 25 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 84
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 85 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELK 144
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 145 NLWAHVWRR 153
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 607 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 653
>gi|357472487|ref|XP_003606528.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355507583|gb|AES88725.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 830
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 34/162 (20%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + +++LL D+D ++ + V +LL C Y+V +V + Q L G+ IDL+L E+
Sbjct: 83 FLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLTEI 142
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVI---------------------------------- 112
+P G+ +L I K L+ IPVI
Sbjct: 143 AMPFVTGIGLLCKIMSHKTLKNIPVISKCHSKPKLCTIFLCILIIAHLVFWCTEHIEMYA 202
Query: 113 MMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+MS D + +V KCL GAAD+LVKP+R NEL NLW H+WRR
Sbjct: 203 VMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRR 244
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 44/48 (91%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
++ REAAL KFRQKRKERCFDKK+RY +RK+LA++RPRVRGQFV+++
Sbjct: 751 RIALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 798
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L E+
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEM 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+ Y +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVHYQSRKRLAEQRPRVRGQFVRQ 659
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ + + +LL ++D + V +LL C YQV S + +Q + L + ++ID++L EV
Sbjct: 74 FLQKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I + IPVIMMS+ D + V KCL GA D+LV P+R NEL N
Sbjct: 134 FMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSKGAVDFLVNPIRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L E+
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEM 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L E+
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEM 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L E+
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEM 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+ Y +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVHYQSRKRLAEQRPRVRGQFVRQ 659
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 26 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 85
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 86 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 145
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 146 NLWAHVWRR 154
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAA++L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 613 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 659
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ ++LL ++D ++ V +LL CSY+V V + + L + IDL+L EV
Sbjct: 90 FLPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEV 149
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G+ +L I K Q PVIMMS+ D + +V+KCL GA D+LVKP+R NEL N
Sbjct: 150 VTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKN 209
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 210 LWQHVWRR 217
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRKERCFDKK+RY +RK+LA++RPRVRGQFVR+V
Sbjct: 734 QREAALNKFRLKRKERCFDKKVRYQSRKKLADQRPRVRGQFVRQV 778
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ + + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 655
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQ + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFV
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFV 653
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 30 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 89
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 90 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 149
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 150 NLWAHVWRR 158
>gi|297733943|emb|CBI15190.3| unnamed protein product [Vitis vinifera]
Length = 139
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%)
Query: 14 GAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN 73
+G GN+ F++RSK++ILLCD + N+ V +LL CSYQ+TSV S R+VI LN
Sbjct: 26 ASGNGNTNKRICAFVNRSKLKILLCDANVNNCREVATLLRGCSYQMTSVGSTREVIYVLN 85
Query: 74 AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMM 114
EG+ ID++LAE DLPM +K+LKYIT+D+EL+ IPV+ M
Sbjct: 86 CEGASIDIVLAEADLPMANSMKILKYITQDQELRCIPVMSM 126
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 90/151 (59%), Gaps = 5/151 (3%)
Query: 18 GNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
G + ++ + +R+L+ D+ +++ V +LL KC+YQV V+S + + L + +
Sbjct: 736 GGAGAAAVDILSPQSLRVLVVDSKASARQEVVALLRKCTYQVMEVKSTAEALQLLKDQQA 795
Query: 78 -----DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
+DLIL E D P ++L+ D L+ +PV++MS+Q++ V+V CL+LGAA
Sbjct: 796 RDGAPGVDLILKEHDPPAANACRLLRRTLEDDVLRTVPVVVMSSQEDRDVMVACLQLGAA 855
Query: 133 DYLVKPLRTNELLNLWTHMWRRRRMLGLAEK 163
DY+++PLR NEL NLW ++ RR L ++
Sbjct: 856 DYMIRPLRHNELRNLWARVYWWRRAFYLQQQ 886
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 469 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGV 517
+RR AL K++QKRK F KKIRY +RK+LA+ RPRV+GQFVR +G
Sbjct: 1600 ERRMQALHKYKQKRKNLNFTKKIRYESRKQLAQARPRVKGQFVRMASGA 1648
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ + + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DLPM-TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 79/128 (61%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R++L +ND ++ V +LL KC Y+V + L ++IDL+L EV
Sbjct: 74 FLPVKTLRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEV 133
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L IT K + IPVIMMS+ D +S+V KCL GA D+LVKPLR NEL N
Sbjct: 134 FMPCLSGIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKN 193
Query: 147 LWTHMWRR 154
LW H+WRR
Sbjct: 194 LWQHVWRR 201
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 462 EVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
+V N+ +REAAL KFR KRK+R F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 701 DVYQNRFPQREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 752
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%)
Query: 44 SSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRD 103
S D + V S ++ +Q L +G++IDL+L EV +P G+ +L I R
Sbjct: 22 SGDGPLGVYSYMGDAVISAKNGQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRH 81
Query: 104 KELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 155
+ IPVIMMS+ D++S V KCL GA D+LVKP+R NEL NLW H+WR+R
Sbjct: 82 NIFKNIPVIMMSSSDDMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRQR 133
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
R+A L K+R+K+K+R F KK+RY +RKRLA++RPRVRGQFV++
Sbjct: 604 RQAQLKKYREKKKDRNFGKKVRYQSRKRLADQRPRVRGQFVKQA 647
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DLPM-TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAA++L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 74/116 (63%)
Query: 39 DNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLK 98
++D + V +LL C+Y+VTSV + L S+ DL+L +V +P G+ +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 99 YITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ + + +R+P+++MS+ D +++V +CL GA DYLVKP+R NEL NLW H+WR+
Sbjct: 249 KMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
RREAAL KFRQKRKERCF+KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 861 RREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVRQA 905
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQ + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVI MS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 148
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 149 NLWAHVWRR 157
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKI-RYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+ RY +RKRLAE+RPRVRGQFVR+
Sbjct: 609 KRERRVAAVNKFREKRKERNFGKKVVRYQSRKRLAEQRPRVRGQFVRQ 656
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DLPM-TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+R NEL
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELK 151
Query: 146 NLWTHMWRR 154
NLW H+WRR
Sbjct: 152 NLWAHVWRR 160
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 74/116 (63%)
Query: 39 DNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLK 98
++D + V +LL C+Y+VTSV + L S+ DL+L +V +P G+ +L
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 99 YITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ + + +R+P+++MS+ D +++V +CL GA DYLVKP+R NEL NLW H+WR+
Sbjct: 249 KMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%), Gaps = 5/53 (9%)
Query: 467 KVDRREAALIKFRQKRKERCFDKK-----IRYVNRKRLAERRPRVRGQFVRKV 514
+ RREAAL KFRQKRKERCF+KK +RY +RKRLAE+RPRVRGQFVR+
Sbjct: 1012 RFARREAALNKFRQKRKERCFEKKVRTFVVRYQSRKRLAEQRPRVRGQFVRQA 1064
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +R+LL +ND + V +LL CSY+V + Q L + ID++L EV
Sbjct: 72 FLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEV 131
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G+ +L I K + IPVIMMS+ D + +V KCL GA D+LVKP+R NEL
Sbjct: 132 IMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKI 191
Query: 147 LWTH 150
LW H
Sbjct: 192 LWQH 195
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
NK+ +REAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRGQFVRK
Sbjct: 657 NKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 705
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
DL+L EV +P G+++L I E + IPVIMMS+QD + V++C++ GA D+LVKP
Sbjct: 14 FDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKP 73
Query: 139 LRTNELLNLWTHMWRRRRM---LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDK 195
+R NEL NLW H+WRR M +E N S + N + T SD+ D
Sbjct: 74 VRKNELRNLWQHVWRRHAMNSQTNASENNAASNHL-----SANGGNGSKTGEHSDEESDA 128
Query: 196 SRRSTNPEIGMSTHQETESVPVATATVVASTS 227
+ E+ + Q E +P A A +S
Sbjct: 129 QSSGSKREVEI---QSAEKLPEVVADGGAGSS 157
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 40/42 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
RREAAL+KFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFV
Sbjct: 567 RREAALLKFRMKRKDRCFEKKVRYHSRKKLAEQRPRVKGQFV 608
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
DL+L EV +P G+++L I E + IPVIMMS+QD + V++C++ GA D+LVKP
Sbjct: 14 FDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKP 73
Query: 139 LRTNELLNLWTHMWRRRRM---LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDK 195
+R NEL NLW H+WRR M +E N S + N + T SD+ D
Sbjct: 74 VRKNELRNLWQHVWRRHAMNSQTNASENNAASNHL-----SANGGNGSKTGEHSDEESDA 128
Query: 196 SRRSTNPEIGMSTHQETESVPVATATVVASTS 227
+ E+ + Q E +P A A +S
Sbjct: 129 QSSGSKREVEI---QSAEKLPEVVADGGAGSS 157
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 40/42 (95%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
RREAAL+KFR KRK+RCF+KK+RY +RK+LAE+RPRV+GQFV
Sbjct: 564 RREAALLKFRMKRKDRCFEKKVRYHSRKKLAEQRPRVKGQFV 605
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V +LL D+D V +L KC+YQVT+ S + + AL G+ +L+L +V +P
Sbjct: 9 VHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAM-ALLERGTQFNLLLTDVMMPDVD 67
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +L Y+ + Q +PV+MMS+ + V+ C+RLGA DYL+KP+ + ++W H+W
Sbjct: 68 GPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWAHVW 127
Query: 153 RRRR 156
RR++
Sbjct: 128 RRKQ 131
>gi|61611704|gb|AAX47178.1| TIMING OF CAB 1 [Pisum sativum]
Length = 53
Score = 101 bits (251), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/53 (90%), Positives = 52/53 (98%)
Query: 468 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVD 520
VDRREAAL+KFRQKRKERCFDKKIRYVNRK+LAERRPRVRGQFV K+NG+NVD
Sbjct: 1 VDRREAALLKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVSKLNGINVD 53
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
DL+L EV +P G+++L I E + IPV+MMS+QD + V+KC++ GA D+LVKP
Sbjct: 14 FDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLKCMQKGAVDFLVKP 73
Query: 139 LRTNELLNLWTHMWRRRRM 157
+R NEL NLW H+WRR M
Sbjct: 74 VRKNELRNLWQHVWRRHAM 92
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%)
Query: 59 VTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQD 118
VT+V + Q L + IDLIL+EV +P G+ +L I + + IPVIMMS+ D
Sbjct: 3 VTAVANGLQAWKLLEDLTNHIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSSHD 62
Query: 119 EVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
++VV KCL GA D+LVKP+R NEL NLW H+WR+
Sbjct: 63 SMNVVFKCLSKGALDFLVKPIRKNELKNLWQHVWRK 98
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 48/59 (81%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
G T V N+ +REAAL KFRQKRKERCF+KK+RY +RK+LAE+RPRVRGQFVR+V
Sbjct: 590 GTGSRTAVDHNRSAQREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQV 648
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
IDL+L EV+LP G +L I + IPVIMMS+ D VS+V KC+ GAAD+LVKP
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 139 LRTNELLNLWTHMWRRRRMLG 159
+R NEL NLW H+WR++ G
Sbjct: 61 IRKNELRNLWQHVWRKQLANG 81
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
IDL+L EV+LP G +L I + IPVIMMS+ D VS+V KC+ GAAD+LVKP
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTIMEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKP 60
Query: 139 LRTNELLNLWTHMWRRRRMLG 159
+R NEL NLW H+WR++ G
Sbjct: 61 IRKNELRNLWQHVWRKQLANG 81
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R ++ L S D+++++V++P
Sbjct: 12 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKFDIVISDVNMPDMD 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 72 GFKLLEHIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 128
Query: 153 RRR 155
R+R
Sbjct: 129 RKR 131
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 19 NSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
++ S GDG S V +L+ D++ SLL KC Y+VT+ S + ++ L G++
Sbjct: 9 SATSGGDGPTATSDVHVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELLR-RGTE 67
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
L+L +V +P G +L+ + D+ L+ +PVIMMSA + V +C++ GA DYL+KP
Sbjct: 68 FHLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDYLLKP 127
Query: 139 LRTNELLNLWTHMWRR 154
+ + ++W H+WR+
Sbjct: 128 VSRKAVKHMWQHVWRK 143
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 24 GDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLIL 83
GD F + +R+L+ D+D + +L++C+Y VT+ R + L D++L
Sbjct: 11 GDQF--PAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVL 68
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
++V +P G K+L+ + + +L PVIMMSA E S+V+K + GA DYL+KP+R E
Sbjct: 69 SDVCMPDMDGFKLLELVGLEMDL---PVIMMSANGETSLVMKGIIHGACDYLLKPIRIKE 125
Query: 144 LLNLWTHMWRRRR 156
L N+W H++RR+R
Sbjct: 126 LKNIWQHVFRRKR 138
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Query: 24 GDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLIL 83
GD F + +R+L+ D+D + +L++C+Y VT+ R + L D++L
Sbjct: 11 GDQF--PAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKERFDVVL 68
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
++V +P G K+L+ + + +L PVIMMSA E S+V+K + GA DYL+KP+R E
Sbjct: 69 SDVCMPDMDGFKLLELVGLEMDL---PVIMMSANGETSLVMKGIIHGACDYLLKPIRIKE 125
Query: 144 LLNLWTHMWRRRR 156
L N+W H++RR+R
Sbjct: 126 LKNIWQHVFRRKR 138
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+DS + +LL +C Y VT+ ++ ++ L + DL++++V +P
Sbjct: 20 MRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDVHMPDMD 79
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S D+ +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 80 GFKLLELVGLEMDL---PVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVI 136
Query: 153 RRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRR 198
RR++ + E+N S D+D SD + ++ T SD S++
Sbjct: 137 RRKK-IDSKEQNKTS-DYDKTNSDSGNGRGSAATGNSDQNGKPSKK 180
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD-IDLILAEVDLP 89
S +LL D++ + + SLL+KC Y+VTS + + L D L+L +V +P
Sbjct: 46 SSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCMP 105
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
G+++L + +D L+ +PV+MMS+ D+ V +C++ GA +YLVKP+ E+ ++W
Sbjct: 106 ELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIWQ 165
Query: 150 HMWRRR 155
H+WR+R
Sbjct: 166 HVWRKR 171
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEG-SDIDLILAEVDLPMT 91
V ILL D++ S V +LL KCSY+VT S + ++ L + LIL +V +P
Sbjct: 5 VHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMMPDV 64
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G+++L+++ D+ +PVIMMSA + V +C+R GA DYL+KP+ E+ ++W H+
Sbjct: 65 DGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMWQHV 124
Query: 152 WRRRR 156
WRR++
Sbjct: 125 WRRQQ 129
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 21/232 (9%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R +D L + D+++++V++P
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDMD 69
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 70 GFKLLEHIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 126
Query: 153 RRR-RMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQE 211
R++ + E N D ++ + S + +LF D R+ + + + +
Sbjct: 127 RKKMHEVKEIEGNDSCDDLQILRN--SFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQES 184
Query: 212 TESVPVATATVVAST----SGTAAVEPIDA-SECGPDVPGISDRRTAGPKKI 258
++ V A VV S AV I SEC P GPKKI
Sbjct: 185 SDGNTVKKARVVWSVDLHQKFVNAVNQIGFDSECSP----------KGPKKI 226
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 17/233 (7%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R +D L + D+++++V++P
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDMD 69
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 70 GFKLLEHIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 126
Query: 153 RRR-RMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQE 211
R++ + E N D ++ + S + +LF D R+ + + + +
Sbjct: 127 RKKMHEVKEIEGNDSCDDLQILRN--SFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQES 184
Query: 212 TESVPVATATVVAST----SGTAAVEPIDASECGP-------DVPGISDRRTA 253
++ V A VV S AV I + GP +VPG++ A
Sbjct: 185 SDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVA 237
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 17/233 (7%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R +D L + D+++++V++P
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNMPDMD 69
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 70 GFKLLEHIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 126
Query: 153 RRR-RMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQE 211
R++ + E N D ++ + S + +LF D R+ + + + +
Sbjct: 127 RKKMHEVKEIEGNDSCDDLQILRN--SFEGLDEKSLFMRSDSDTMRKRKDVDKDHADQES 184
Query: 212 TESVPVATATVVAST----SGTAAVEPIDASECGP-------DVPGISDRRTA 253
++ V A VV S AV I + GP +VPG++ A
Sbjct: 185 SDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVA 237
>gi|383171336|gb|AFG68971.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171338|gb|AFG68972.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171342|gb|AFG68974.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171344|gb|AFG68975.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
Length = 97
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNGQP 525
+V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 1 QVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANGVV 60
Query: 526 SSVDYDEDEDE 536
VD EDED+
Sbjct: 61 YGVDSSEDEDD 71
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D S+V +L+ ++D + A +L C Y V +V + +Q +D L A + DL+L +V
Sbjct: 1 MDPSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVLVANHAKFDLVLCDVM 60
Query: 88 LPMTKGLKMLKYITRDKE-LQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
LP+ G+++L I + L IP++M S+ +E+ VV CL GA DYL+KP++ N
Sbjct: 61 LPVMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKT 120
Query: 147 LWTHMWRRRRM 157
L H+W RR+
Sbjct: 121 LVRHVWLSRRL 131
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 84/137 (61%), Gaps = 6/137 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R ++ L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQHVF 133
Query: 153 RRRRMLGLAEKNILSYD 169
R++ G K++ SY+
Sbjct: 134 RKKIHEG---KDVESYE 147
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 25 DGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
DG D V R+L D+D + SLL KC Y VT+ + + + L + DL+
Sbjct: 14 DGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLRENRNKFDLV 73
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+++V++P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 74 ISDVNMPDMDGFKLLELVGLEMDL---PVIMLSAHSDTELVMKGIAHGACDYLLKPVRIE 130
Query: 143 ELLNLWTHMWRRRRM 157
EL N+W H+ RR+++
Sbjct: 131 ELKNIWQHVIRRKKL 145
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 19 NSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
++ S DG + S V +L+ D++ SLL +C Y+VT S + ++ L G++
Sbjct: 16 STSSLNDGPVTTSDVHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR-RGTE 74
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
++L +V +P G +L+ + D+ L+ +PV+MMSA + V +C++ GA DYL+KP
Sbjct: 75 FHMLLTDVMMPGIDGPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKP 134
Query: 139 LRTNELLNLWTHMWRRRRM 157
+ + ++WTH+WR+ ++
Sbjct: 135 VSRRAVKHMWTHVWRKSQV 153
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KC+Y+VT+ R + L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R+R
Sbjct: 134 RKR 136
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 16/179 (8%)
Query: 25 DGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
DG DR V R+L D+D + +LL KC Y VT+ + + L + DL+
Sbjct: 9 DGGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLV 68
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+++V++P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 69 ISDVNMPDIDGFKLLELVGLEMDL---PVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIE 125
Query: 143 ELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASD---PSDANTNSTTLFSDDTDDKSRR 198
EL N+W H+ RR KN S D + +++ P+ A S L S+++ D+++R
Sbjct: 126 ELKNIWQHVVRR--------KNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKR 176
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D V +L +C Y+VT+ + ++ L A D D++L++V +P
Sbjct: 13 AGLRVLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEALETLRARRDDFDIVLSDVHMPD 72
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L++I + + +PV+MMSA VV++ + GA DYL+KP+R EL N+W H
Sbjct: 73 MDGFKLLEHIALELD---VPVMMMSANCATDVVLRGIIHGAVDYLLKPVRLEELRNIWQH 129
Query: 151 MWRRRR 156
+ RR+R
Sbjct: 130 VVRRQR 135
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R ++ L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNMLRERKDGFDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPVRMKELKNIWQHVF 133
Query: 153 RRR 155
R++
Sbjct: 134 RKK 136
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KC+Y+VT+ R + L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L ++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLGHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R+R
Sbjct: 134 RKR 136
>gi|383171334|gb|AFG68970.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
gi|383171340|gb|AFG68973.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
Length = 97
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNGQP 525
+V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + +G
Sbjct: 1 QVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGASGVV 60
Query: 526 SSVDYDEDEDE 536
VD EDED+
Sbjct: 61 YGVDSSEDEDD 71
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R + L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R++
Sbjct: 134 RKK 136
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R+ + L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVL 133
Query: 153 RRR 155
R++
Sbjct: 134 RKK 136
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L D+D + +L KCSY+VT + + L DL++++V +P
Sbjct: 22 AGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMPD 81
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+Y+ + +L PVIM S+ E +V+K + GA DYL+KP+RT EL N+W H
Sbjct: 82 MDGFKLLEYVGLEMDL---PVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 138
Query: 151 MWRRRR 156
+ R++R
Sbjct: 139 VVRKKR 144
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S V +LL D+ LL +C YQVT+ S R+ + AL G+ +L+L +V +P
Sbjct: 8 STVHVLLVDDAG--------LLRRCQYQVTTASSGREAM-ALLERGTQFNLLLTDVMMPD 58
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G +L ++ + +PV+MMS+ + +V+ C+RLGA DY++KP+ + ++W H
Sbjct: 59 VDGPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAH 118
Query: 151 MWRRRR 156
+WRR++
Sbjct: 119 VWRRKQ 124
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC YQVT+ Q + L + DL++++V++P
Sbjct: 18 MRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLRENRNKYDLVISDVNMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + +V K + GA DYL+KP+R EL N+W H+
Sbjct: 78 GFKLLELVGLEMDL---PVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELKNIWQHVI 134
Query: 153 RRRRM 157
RR+++
Sbjct: 135 RRKKL 139
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D V +L +C Y+VT+ + + L D D++L++V +P
Sbjct: 14 LRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVLSDVHMPDMD 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + + IPV+MMSA VV++ + GA DYL+KP+R EL N+W H+
Sbjct: 74 GFKLLEHIALELD---IPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRNIWQHVV 130
Query: 153 RRRR 156
RR+R
Sbjct: 131 RRKR 134
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D S+V +L+ ++D + A +L C Y V +V + +Q +D L + DL+L +V
Sbjct: 1 MDPSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHAKFDLVLCDVM 60
Query: 88 LPMTKGLKMLKYITRDKE-LQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
LP+ G+++L I + L IP++M S+ +E+ VV CL GA DYL+KP++ N
Sbjct: 61 LPVMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKT 120
Query: 147 LWTHMWRRRRM 157
L H+W RR+
Sbjct: 121 LVRHVWLSRRL 131
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KC+Y+VT+ R + L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R++
Sbjct: 134 RKK 136
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 13 SGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL 72
SG G S S D F + +R+L+ D+D + +L+ C Y+VT + L
Sbjct: 12 SGTAAGGSNS--DPF--PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL 67
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
+ D+++++V +P G K+L+++ + +L PVIMMSA D SVV+K + GA
Sbjct: 68 RKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAV 124
Query: 133 DYLVKPLRTNELLNLWTHMWRRRR 156
DYL+KP+R L N+W H+ R++R
Sbjct: 125 DYLIKPVRIEALKNIWQHVVRKKR 148
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 23 SGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
SGD D+ + +R+L+ D+D + +L C Y+VT + L + D
Sbjct: 21 SGDAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFD 80
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
+++++V +P G K+L++I + +L PVIMMSA D SVV+K + GA DYL+KP+R
Sbjct: 81 IVISDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADDGKSVVMKGVTHGACDYLIKPVR 137
Query: 141 TNELLNLWTHMWRRRR 156
L N+W H+ R+R+
Sbjct: 138 IEALKNIWQHVVRKRK 153
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 23 SGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
SGD D+ + +R+L+ D+D + +L C Y+VT + L + D
Sbjct: 21 SGDAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFD 80
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
+++++V +P G K+L++I + +L PVIMMSA D SVV+K + GA DYL+KP+R
Sbjct: 81 IVISDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADDGKSVVMKGVTHGACDYLIKPVR 137
Query: 141 TNELLNLWTHMWRRRR 156
L N+W H+ R+R+
Sbjct: 138 IEALKNIWQHVVRKRK 153
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KC+Y+VT+ R + L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVL 133
Query: 153 RRR 155
R+R
Sbjct: 134 RKR 136
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L D+D + +L KCSY+VT + + L DL++++V +P
Sbjct: 12 AGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVFMPD 71
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+Y+ + +L PVIM S+ E +V+K + GA DYL+KP+RT EL N+W H
Sbjct: 72 MDGFKLLEYVGLEMDL---PVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 128
Query: 151 MWRRRR 156
+ R++R
Sbjct: 129 VVRKKR 134
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM-T 91
+R+LL D + + LL+ C Y+VT + R ++ L+ D++L EV P
Sbjct: 25 MRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAVEELHENPWSYDMVLTEVHAPAGI 84
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G +L+Y D +L PV++ SA D+ V+KC+ GA DYLVKPLR EL N+W H+
Sbjct: 85 DGFNLLQYAGTDMDL---PVVVFSADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHV 141
Query: 152 WRR 154
+RR
Sbjct: 142 YRR 144
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC Y VT+ + + L + DL++++V++P
Sbjct: 19 MRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDVNMPDID 78
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 79 GFKLLELVGLEMDL---PVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQHVV 135
Query: 153 RRRRMLGLAEKNILSYDFDLVASD---PSDANTNSTTLFSDDTDDKSRR 198
RR KN S D + +++ P+ A S L S+++ D+++R
Sbjct: 136 RR--------KNFDSRDQNKASNEEKAPNIAGEGSQGLRSENSADQNKR 176
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L +CSY+VT+ R ++ L D+++++V +P
Sbjct: 15 AGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDVFMPD 74
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H
Sbjct: 75 MDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQH 131
Query: 151 MWRRR 155
++R++
Sbjct: 132 VFRKK 136
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 13 SGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL 72
SG G S S D F + +R+L+ D D + +L+ C Y+VT + L
Sbjct: 12 SGTAAGGSNS--DPF--PANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRAESALSLL 67
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
+ D+++++V +P G K+L+++ + +L PVIMMSA D SVV+K + GA
Sbjct: 68 RKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAV 124
Query: 133 DYLVKPLRTNELLNLWTHMWRRRR 156
DYL+KP+R L N+W H+ R++R
Sbjct: 125 DYLIKPVRIEALKNIWQHVVRKKR 148
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D + +L C Y+VT + L D+++++V +P
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPD 94
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA D SVV+K + GA DYL+KP+R L N+W H
Sbjct: 95 MDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 151
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 152 VVRKRR 157
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D + +L C Y+VT + L D+++++V +P
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPD 94
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA D SVV+K + GA DYL+KP+R L N+W H
Sbjct: 95 MDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 151
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 152 VVRKRR 157
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + SLL C Y VT+ ++ ++ L + DL++++VD+P
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + V+K + GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLELVGLEMDL---PVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 153 RRR 155
R R
Sbjct: 134 RSR 136
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D + +L C Y+VT + L D+++++V +P
Sbjct: 33 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPD 92
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA D SVV+K + GA DYL+KP+R L N+W H
Sbjct: 93 MDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 149
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 150 VVRKRR 155
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D+ + +L +C Y VT+ + ++ L D++L++V +P
Sbjct: 41 AGLRVLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMPD 100
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA S V++ +R GA DYL+KP+R EL N+W H
Sbjct: 101 MDGFKLLEHVGLEMDL---PVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH 157
Query: 151 MWRRR 155
+ R++
Sbjct: 158 VVRKK 162
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D + +L C Y+VT + L D+++++V +P
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPD 94
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA D SVV+K + GA DYL+KP+R L N+W H
Sbjct: 95 MDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 151
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 152 VVRKRR 157
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D + +L C Y+VT + L D+++++V +P
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPD 94
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA D SVV+K + GA DYL+KP+R L N+W H
Sbjct: 95 MDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 151
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 152 VVRKRR 157
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + SLL C Y VT+ ++ ++ L + DL++++VD+P
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + V+K + GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLELVGLEMDL---PVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 153 RRR 155
R R
Sbjct: 134 RSR 136
>gi|361068043|gb|AEW08333.1| Pinus taeda anonymous locus 2_6538_01 genomic sequence
Length = 97
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVN-VDLNGQP 525
+V+RREAAL KFRQKRK+RCFDKKIRYV+RKRLAE+RPR+RGQFVR+ N + NG
Sbjct: 1 QVERREAALNKFRQKRKDRCFDKKIRYVSRKRLAEQRPRIRGQFVRQTNDMEAAGANGVV 60
Query: 526 SSVDYDEDEDE 536
VD E ED+
Sbjct: 61 YGVDSSEYEDD 71
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+DS + +LL +C Y VT+ ++ + L + DL++++V +P
Sbjct: 20 MRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDVHMPDMD 79
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S D+ +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 80 GFKLLELVGLEMDL---PVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVI 136
Query: 153 RRRRM 157
RR+++
Sbjct: 137 RRKKI 141
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +L+ D++ +L KC Y+VT+ S + I+ L G++ +L+L +V +P
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR-RGTEFNLLLTDVMMPDID 109
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + ++PVIMMSA +V +C+R GA DYL+KP+ ++ LW H+W
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 153 RRR 155
R++
Sbjct: 170 RKQ 172
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 13/166 (7%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL C Y VT+ ++ ++ L + DL++++VD+P
Sbjct: 17 MRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + V+K + GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLELVGLEMDL---PVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 153 RRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRR 198
R R +KN S + D D + N +SD + ++ R
Sbjct: 134 RSR-----FDKNRGSNN-----GDKRDGSGNEGVGYSDQNNGRANR 169
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R ++ L D+++++V +P
Sbjct: 18 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 78 GFKLLEQVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
Query: 153 RRR 155
R++
Sbjct: 135 RKK 137
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL-NAEGSDIDLILAEVDLPMTK 92
+LL ++D + V LL +C+Y+VT R+ ++ +D L + + DLIL ++ +P
Sbjct: 14 HVLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVD 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G+ ++ + + K +PVI+MS++ + K +GAADYL+KP+R NE+ LW H+W
Sbjct: 74 GMDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIW 133
Query: 153 RRRRMLG 159
R+ G
Sbjct: 134 RKVMAAG 140
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 13 SGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL 72
SG G S S D F + +R+L+ D+D + +L+ C Y+VT + L
Sbjct: 12 SGTAAGGSNS--DPF--PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLL 67
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
+ D+++++V +P G K+L+++ + +L PVIMMSA D SVV+K + GA
Sbjct: 68 RKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAV 124
Query: 133 DYLVKPLRTNELLNLWTHMWRRRR 156
DYL+KP+R L N+W H+ R++R
Sbjct: 125 DYLIKPVRIEALKNIWQHVVRKKR 148
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 16/179 (8%)
Query: 25 DGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
DG DR V R+L D+D + +LL KC Y VT+ + + L + DL+
Sbjct: 9 DGGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLV 68
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+++V++P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 69 ISDVNMPDIDGFKLLELVGLEMDL---PVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIE 125
Query: 143 ELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASD---PSDANTNSTTLFSDDTDDKSRR 198
EL N+W H+ RR KN S D + +++ P+ A S L S+++ D+++R
Sbjct: 126 ELKNIWQHVVRR--------KNFDSRDQNKASNEEKAPNFAGGGSQGLRSENSADQNKR 176
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D + +L C Y+VT + L D+++++V +P
Sbjct: 33 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPD 92
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA D SVV+K + GA DYL+KP+R L N+W H
Sbjct: 93 MDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 149
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 150 VVRKRR 155
>gi|379025924|dbj|BAL63739.1| pseudo-response regulator [Triticum turgidum]
Length = 659
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 29 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 88
Query: 87 DL-PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ G+ +L I + + IPVIMMS+ D + V+ CL GAAD+L KP+ E
Sbjct: 89 FMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIMVVE-- 146
Query: 146 NLWTHMWRR 154
TH+WRR
Sbjct: 147 ---THVWRR 152
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 604 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 650
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC Y VT+ Q + L + DL++++V++P
Sbjct: 24 MRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDVNMPDMD 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA +V K + GA DYL+KP+R EL N+W H+
Sbjct: 84 GFKLLELVGLEMDL---PVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQHVL 140
Query: 153 RRRR 156
RR++
Sbjct: 141 RRKK 144
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 13 SGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL 72
SG G S S D F + +R+L+ D+D + +L+ C Y+VT + L
Sbjct: 12 SGTTAGGSNS--DPF--PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLL 67
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
+ D+++++V +P G K+L+++ + +L PVIMMSA D SVV+K + GA
Sbjct: 68 RKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDL---PVIMMSADDSKSVVLKGVTHGAV 124
Query: 133 DYLVKPLRTNELLNLWTHMWRRRR 156
DYL+KP+R L N+W H+ R++R
Sbjct: 125 DYLIKPVRIEALKNIWQHVVRKKR 148
>gi|325910794|dbj|BAJ83827.1| circadian response regulator 1b [Physcomitrella patens subsp.
patens]
Length = 701
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 55/78 (70%)
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLV 136
S+ DL+L +V +P G+ +L + + + +R+P+++MS+ D + +V +C+ GA DYLV
Sbjct: 7 SNFDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVIMSSYDSLDIVFRCISKGACDYLV 66
Query: 137 KPLRTNELLNLWTHMWRR 154
KP+R NEL NLW H+WR+
Sbjct: 67 KPVRKNELRNLWQHVWRK 84
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
S GN TE + RREAAL KFRQKRKERCF+KK+RY +RK+LAE+RPRVRGQFVR+
Sbjct: 633 SGGNGLCTE--QIRFARREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQ 690
Query: 514 V 514
Sbjct: 691 A 691
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC Y V++ R + L DL++++V +P
Sbjct: 20 MRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLRENKDRFDLVISDVHMPDMD 79
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L + + +L PVIM+SA + +V+K + GA DYLVKP+R EL N+W H+
Sbjct: 80 GFKLLDQVGLEMDL---PVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQHVI 136
Query: 153 RRRR 156
RRR+
Sbjct: 137 RRRK 140
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +++L+ D+D V +L +C+YQVT+ + + ++ L DL+L++V +P
Sbjct: 52 AGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKLRDRSVHFDLVLSDVYMPD 111
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L++I + +L PVIMMS+ E +VV++ + GA D+L+KP+R EL N+W H
Sbjct: 112 MDGFKLLEHIGLELDL---PVIMMSSNGETNVVLRGVTHGAVDFLIKPVRVEELRNVWQH 168
Query: 151 MWRRRR 156
+ RR+R
Sbjct: 169 VVRRKR 174
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%), Gaps = 9/147 (6%)
Query: 16 GIGNSKSS----GDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVI 69
G G++ SS GD D+ + +R+L+ D+D + +L C Y+VT + +
Sbjct: 6 GKGSTSSSPLKAGDSVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVAL 65
Query: 70 DALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRL 129
L + D++L++V +P G K+L++I + +L PVIMMSA D VV+K +
Sbjct: 66 SLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADDGKHVVMKGVTH 122
Query: 130 GAADYLVKPLRTNELLNLWTHMWRRRR 156
GA DYL+KP+R L N+W H+ R+R+
Sbjct: 123 GACDYLIKPVRIEALKNIWQHVIRKRK 149
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNA---EGSDIDLILAEVDLPMT 91
+LL ++D + V LL KC+Y+VT + R+ I L A G +DLIL ++ +P
Sbjct: 5 VLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMPEV 64
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G ++ + +PV++MS+QD V++ + GAADYL+KP+R NEL LW H+
Sbjct: 65 TGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQHV 124
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ I L + D+++++V++P
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNMPDMD 72
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 73 GFKLLELIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 129
Query: 153 RRR 155
R++
Sbjct: 130 RKK 132
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 5/135 (3%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
SGD F +R+L D+D + +LL +C Y VT+ + + L DL+
Sbjct: 10 SGDEF--PVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREHKDKFDLV 67
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+++V +P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 68 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGDTKMVMKGISHGACDYLLKPVRME 124
Query: 143 ELLNLWTHMWRRRRM 157
EL N+W H+ RR++
Sbjct: 125 ELKNIWQHVIRRKKF 139
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ I L + D+++++V++P
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNMPDMD 72
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 73 GFKLLELIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 129
Query: 153 RRR 155
R++
Sbjct: 130 RKK 132
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 20 SKSSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
S S DG D+ V R+L+ D+D + + ++L +C Y VT+ + L +
Sbjct: 20 STVSTDGSKDQFPVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKN 79
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D DL++++V +P G K+L+ + + +L PVIMMS + + V+K + GA DYL+K
Sbjct: 80 DFDLVISDVYMPDMDGFKLLELVGLEMDL---PVIMMSTDGDYNNVMKGITHGACDYLLK 136
Query: 138 PLRTNELLNLWTHMWRRRR 156
P+R EL N+W H+ R+R+
Sbjct: 137 PVRMEELRNIWQHLVRKRK 155
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L C Y+VT + L S D+++++V +P
Sbjct: 31 AGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPD 90
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L++I + +L PVIMMSA D VV+K + GA DYL+KP+R L N+W H
Sbjct: 91 MDGFKLLEHIGLEMDL---PVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 151 MWRRRR 156
+ R+R+
Sbjct: 148 VVRKRK 153
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VTS + L DL++++V +P
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 86 GFKLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 142
Query: 153 RRRRMLGLAEKNILSYDFDLVASDPSDANTNST----TLFSDDTDDKSRR 198
RR+ G E+N L DF + P A+T+ T S D + +S R
Sbjct: 143 RRK--FGNRERNNL--DFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSR 188
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VTS + L DL++++V +P
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMD 85
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 86 GFKLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 142
Query: 153 RRRRMLGLAEKNILSYDFDLVASDPSDANTNST----TLFSDDTDDKSRR 198
RR+ G E+N L DF + P A+T+ T S D + +S R
Sbjct: 143 RRK--FGNRERNNL--DFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSR 188
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + ++ L + DL++++VD+P
Sbjct: 17 MRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLELVGLEMDL---PVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 153 R 153
R
Sbjct: 134 R 134
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D++ + +LV+C+Y+VT+ + + L + D+++++VD+P
Sbjct: 54 MRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSMLREDIGKFDVVISDVDMPDMD 113
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E S V+K + GA DYL+KP+R EL N+W H+
Sbjct: 114 GFKLLELVGLEMDL---PVIMVSGNGETSAVMKGITHGACDYLLKPVRIEELRNIWQHVV 170
Query: 153 RRRR 156
R++R
Sbjct: 171 RKKR 174
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KC Y+VT R ++ L D+++++V++P
Sbjct: 17 LRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLELVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R++
Sbjct: 134 RKK 136
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + + L + DL++++VD+P
Sbjct: 14 MRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISDVDMPDMD 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 74 GFKLLELVGLEMDL---PVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 130
Query: 153 RRRRM 157
R+ +
Sbjct: 131 RKGKF 135
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + ++ L + DL++++VD+P
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 77 GFKLLELVGLEMDL---PVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 153 R 153
R
Sbjct: 134 R 134
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 22 SSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI 79
S G G D+ V R+L D+D + +LL++C Y VT+ + L +
Sbjct: 13 SGGHGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQF 72
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL++++V +P G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+
Sbjct: 73 DLVISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPV 129
Query: 140 RTNELLNLWTHMWRRR 155
R +L +W H+ RRR
Sbjct: 130 RIEQLRTIWQHVVRRR 145
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L +C Y VT+ ++ L + D++L++V +P
Sbjct: 31 AGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPD 90
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA S V++ +R GA DYL+KP+R EL N+W H
Sbjct: 91 MDGYKLLEHVGLEMDL---PVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH 147
Query: 151 MWRRR 155
+ R++
Sbjct: 148 VVRKK 152
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 22 SSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI 79
S G G D+ V R+L D+D + +LL++C Y VT+ + L +
Sbjct: 13 SGGHGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQF 72
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL++++V +P G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+
Sbjct: 73 DLVISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPV 129
Query: 140 RTNELLNLWTHMWRRR 155
R +L +W H+ RRR
Sbjct: 130 RIEQLRTIWQHVVRRR 145
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 22 SSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI 79
S G G D+ V R+L D+D + +LL++C Y VT+ + L +
Sbjct: 13 SGGHGAKDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLREKKDQF 72
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL++++V +P G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+
Sbjct: 73 DLVISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPV 129
Query: 140 RTNELLNLWTHMWRRR 155
R +L +W H+ RRR
Sbjct: 130 RIEQLRTIWQHVVRRR 145
>gi|325180319|emb|CCA14722.1| protein kinase putative [Albugo laibachii Nc14]
Length = 977
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D ++V +L+ ++D + A +L C Y+V +V + ++ +DAL E + DL+L +V
Sbjct: 1 MDPTEVCVLVVEDDEFTRMATIDILRSCRYEVFAVENGKEALDALMQEPTKYDLVLCDVM 60
Query: 88 LPMTKGLKMLKYI--------TRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
LP+ G+++L + T L IPV+M S+ +E+ VV CL GA DYL+KP+
Sbjct: 61 LPVMNGIQLLAAMMERNGFTSTHSLALHHIPVVMTSSNEEMDVVTNCLSKGAKDYLIKPI 120
Query: 140 RTNELLNLWTHMW 152
+ N L H+W
Sbjct: 121 QVNTAKTLVRHVW 133
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + + ++L +C Y VT+ + L +D DL++++V +P
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMS + + V+K + GA DYL+KP+R EL N+W H+
Sbjct: 61 GFKLLELVGLEMDL---PVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLV 117
Query: 153 RRRR 156
R+R+
Sbjct: 118 RKRK 121
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D+ + + + ++C Y+VT+ ++ L D++L++V +P
Sbjct: 14 LRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMD 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS S V+K +R GA DYL+KP+R EL N+W H+
Sbjct: 74 GYKLLEHVGLEMDL---PVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVV 130
Query: 153 RR 154
R+
Sbjct: 131 RK 132
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L C Y+VT + L S D+++++V +P
Sbjct: 31 AGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPD 90
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L++I + +L PVIMMSA D VV+K + GA DYL+KP+R L N+W H
Sbjct: 91 MDGFKLLEHIGLEMDL---PVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 151 MWRRRR 156
+ R+R+
Sbjct: 148 VVRKRK 153
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ + L + D+++++V++P
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNMPDMD 72
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 73 GFKLLELIGLEMDL---PVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVY 129
Query: 153 RRR 155
R++
Sbjct: 130 RKK 132
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L C Y+VT + + L + D++L++V +P
Sbjct: 33 LRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMD 92
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + +L PVIMMSA D +VV+K + GA DYL+KP+R L N+W H+
Sbjct: 93 GFKLLEHIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 153 RRRR 156
R+R+
Sbjct: 150 RKRK 153
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 16 GIGNSKSS----GDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVI 69
G G++ SS GD D+ + +R+L+ D+D + +L C Y+VT + +
Sbjct: 6 GKGSTSSSPLKAGDTVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVAL 65
Query: 70 DALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRL 129
L + D++L++V +P G K+L++I + +L PVIMMSA D VV+K +
Sbjct: 66 SLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADDGKQVVMKGVTH 122
Query: 130 GAADYLVKPLRTNELLNLWTHMWRRRR 156
GA DYL+KP+R L N+W H+ R R+
Sbjct: 123 GACDYLIKPVRIEALKNIWQHVVRMRK 149
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R+ + L D+++++V++P
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K + GA DYL+KP+R EL +W H+
Sbjct: 71 GFKLLEHVGLELDL---PVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHVL 127
Query: 153 RRR 155
R++
Sbjct: 128 RKK 130
>gi|379025626|dbj|BAL63590.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 697
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIP-----------------------------VIMMSA 116
+ G+ +L I + + IP +MS+
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPDPPHLGAKMFQYQVHLLQCCCVHRFICSWFPVMSS 151
Query: 117 QDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
D + V+ CL GAAD+L KP+R NEL NLW H+WRR
Sbjct: 152 HDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWRR 189
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 642 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 688
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L C Y+VT + + L + D++L++V +P
Sbjct: 33 LRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMD 92
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L++I + +L PVIMMSA D +VV+K + GA DYL+KP+R L N+W H+
Sbjct: 93 GFKLLEHIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
Query: 153 RRRR 156
R+R+
Sbjct: 150 RKRK 153
>gi|379025628|dbj|BAL63591.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025630|dbj|BAL63592.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 697
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ R +R+LL + D ++ V +LL C YQV + Q L S+IDL+L EV
Sbjct: 32 FLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEV 91
Query: 87 DL-PMTKGLKMLKYITRDKELQRIP-----------------------------VIMMSA 116
+ G+ +L I + + IP +MS+
Sbjct: 92 FMHGGLSGIDLLGRIMNHEVCKDIPDPPHLGAKMFQYQVHLLQCCCVHRFICSWFPVMSS 151
Query: 117 QDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
D + V+ CL GAAD+L KP+R NEL NLW H+WRR
Sbjct: 152 HDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWRR 189
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 642 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 688
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D+ + + + ++C Y+VT+ ++ L D++L++V +P
Sbjct: 12 LRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMD 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS S V+K +R GA DYL+KP+R EL N+W H+
Sbjct: 72 GYKLLEHVGLEMDL---PVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVV 128
Query: 153 RR 154
R+
Sbjct: 129 RK 130
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 68/129 (52%), Gaps = 20/129 (15%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K R+LL +ND ++ + +LL C YQVT + Q L + IDL+L EV+LP
Sbjct: 57 KSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDXSNHIDLVLTEVNLP-- 114
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
R+ V MS D ++V+KCL GA D+LVKP R NEL LW H+
Sbjct: 115 ----------------RLSV--MSTXDSGALVLKCLSKGATDFLVKPXRKNELKFLWQHI 156
Query: 152 WRRRRMLGL 160
WRRR+ G
Sbjct: 157 WRRRQNNGF 165
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 10 KECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVI 69
K SGA S S D + +R+L+ D+D + +L C Y+VT +
Sbjct: 10 KNMSGARCSVSWKSNDNNQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESAL 69
Query: 70 DALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRL 129
L + D+++++V +P G K+L+++ + +L PVIMMSA D VV+K +
Sbjct: 70 SLLRENRNGFDIVISDVHMPDMDGFKLLEHVGLEMDL---PVIMMSADDSKDVVMKGVTH 126
Query: 130 GAADYLVKPLRTNELLNLWTHMWRRRR 156
GA DYL+KP+R L N+W H+ R+++
Sbjct: 127 GACDYLIKPVRIEALKNIWQHVIRKKK 153
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R+ + L D+++++V++P
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL +W H+
Sbjct: 71 GFKLLEHVGLELDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 153 RRR 155
R++
Sbjct: 128 RKK 130
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 71/117 (60%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL +++ A++ +L C Y+VT+V + ++ + L E + DL+L ++ +P G
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
++L + D++L +PV++MSA + ++ CLR+GA DYLVKP+R E L HM
Sbjct: 69 ELLTLMQEDEKLSLLPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L +C Y VT+ ++ L + D++L++V +P
Sbjct: 31 AGLRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPD 90
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+++ + +L PVIMMSA S V++ +R GA DYL+KP+R EL N+W H
Sbjct: 91 MDGYKLLEHVGLEMDL---PVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQH 147
Query: 151 MWRRR 155
+ R++
Sbjct: 148 VVRKK 152
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 21 KSSGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
KS GDG D+ + +R+L+ D+D + +L C Y+VT + L +
Sbjct: 22 KSGGDGVSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLLRDNRNG 81
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
D+++++V +P G K+L+ + + +L PVIMMSA D +VV+K + GA DYL+KP
Sbjct: 82 YDIVISDVHMPDMDGFKLLEQVGLEMDL---PVIMMSADDSKNVVMKGVTHGACDYLIKP 138
Query: 139 LRTNELLNLWTHMWRRRR 156
+R L N+W H+ R+ +
Sbjct: 139 VRIEALKNIWQHVVRKGK 156
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KC Y+VT+ + + L D+++++V++P
Sbjct: 18 LRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 78 GFKLLEQVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 134
Query: 153 RRR 155
R+R
Sbjct: 135 RKR 137
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L +CSY+VT+ R ++ L D+++++V +P
Sbjct: 10 LRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDVYMPDMD 69
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 70 GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 126
Query: 153 RRR 155
R++
Sbjct: 127 RKK 129
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R+ + L D+++++V++P
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL +W H+
Sbjct: 71 GFKLLEHVGLELDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 153 RRR 155
R++
Sbjct: 128 RKK 130
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L C Y VT+ + L + D++L++V +P
Sbjct: 22 AGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNKNGFDIVLSDVHMPD 81
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+YI + +L PVIMMS D +VV+K + GA DYL+KP+R L N+W H
Sbjct: 82 MDGFKLLEYIGLEMDL---PVIMMSVDDGKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 138
Query: 151 MWRRRR 156
+ R+R+
Sbjct: 139 VVRKRK 144
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L KCSY+VT+ R+ + L D+++++V++P
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+++ + +L PVIMMS E S V+K ++ GA DYL+KP+R EL +W H+
Sbjct: 71 GFKLLEHVGLELDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 153 RRR 155
R++
Sbjct: 128 RKK 130
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 20/125 (16%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K R+LL +ND ++ + +LL C YQVT + Q L + IDL+L EV+LP
Sbjct: 57 KSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDASNHIDLVLTEVNLP-- 114
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
R+ V MS D ++V+KCL GA D+LVKP+R NEL LW H+
Sbjct: 115 ----------------RLSV--MSTDDSGALVLKCLSKGATDFLVKPIRKNELKFLWQHI 156
Query: 152 WRRRR 156
WRRR+
Sbjct: 157 WRRRQ 161
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
SGD F +R+L D+D + +LL +C Y T+ + + L DL+
Sbjct: 10 SGDEF--PVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREHKDKFDLV 67
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+++V +P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 68 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGDTKLVMKGISHGACDYLLKPVRME 124
Query: 143 ELLNLWTHMWRRRRM 157
EL N+W H+ RR++
Sbjct: 125 ELKNIWQHVIRRKKF 139
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D++ + + +L CSY+VT+ + L + DL++++V++P
Sbjct: 48 AGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDVNMPD 107
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ + + +L PVIMMS E S V+K + GA DYL+KP+R EL N+W H
Sbjct: 108 MDGFKLLELVGLEMDL---PVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQH 164
Query: 151 MWRRRR 156
+ R+RR
Sbjct: 165 VVRKRR 170
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L C Y+VT + L + D+++++V +P
Sbjct: 31 AGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGYDIVISDVHMPD 90
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L++I + +L PVIMMSA + SVV+K + GA DYL+KP+R L N+W H
Sbjct: 91 MDGFKLLEHIGLEMDL---PVIMMSADEAKSVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
Query: 151 MWRRRR 156
+ R++R
Sbjct: 148 VVRKKR 153
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ ILL D+D+ S V ++L C YQV +++ P + +D L A DL++ ++ +P
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL++ K + ++ +L PVIMMSA ++ SV++K L G A Y+VKP+ +++ ++W +
Sbjct: 69 GLQLQKKVMQEFKL---PVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 12 CSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
C GAG S D F + +R+L+ D+D + +L +C Y VT+ +
Sbjct: 21 CKGAGADLMFS--DQF--PAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKL 76
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
L D++L++V +P G K+L+ + + +L PVIMMSA S V++ +R GA
Sbjct: 77 LRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDL---PVIMMSADGRTSAVMRGIRHGA 133
Query: 132 ADYLVKPLRTNELLNLWTHMWRRR 155
DYL+KP+R EL N+W H+ R++
Sbjct: 134 CDYLIKPIREEELKNIWQHVIRKK 157
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 6 MNLNKECSG----AGIGNSKSSGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQV 59
MNL C G A G + DG D+ + +R+L+ D+D + +L C Y+V
Sbjct: 2 MNL-ANCKGSMSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEV 60
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
T + L + D+++++V +P G K+L+ I + +L PVIMMSA D
Sbjct: 61 TKCNRAEIALSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDL---PVIMMSADDG 117
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR 156
+VV+K + GA DYL+KP+R L N+W H+ R+R+
Sbjct: 118 KNVVMKGVTHGACDYLIKPIRIEALKNIWQHVVRKRK 154
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 6 MNLNKECSG----AGIGNSKSSGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQV 59
MNL C G A G + DG D+ + +R+L+ D+D + +L C Y+V
Sbjct: 2 MNL-ANCKGSMSTATSGGVWKASDGASDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEV 60
Query: 60 TSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDE 119
T + L + D+++++V +P G K+L+ I + +L PVIMMSA D
Sbjct: 61 TKCNRAEIALSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDL---PVIMMSADDG 117
Query: 120 VSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR 156
+VV+K + GA DYL+KP+R L N+W H+ R+R+
Sbjct: 118 KNVVMKGVTHGACDYLIKPIRIEALKNIWQHVVRKRK 154
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC Y+VT+ ++ L + DL++++V++P
Sbjct: 21 MRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S+ + V K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSSHGDKEFVFKGITHGAVDYLLKPVRLEELKNIWQHVI 137
Query: 153 RRRR 156
RR++
Sbjct: 138 RRKK 141
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D S + L+ C Y VT+ + ++ L + S DLI+++V++P
Sbjct: 21 MRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNMPEMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L P IM+S D+ V+K + GA DYLVKP+R EL N+W H+
Sbjct: 81 GFKLLEQVGLEMDL---PFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVV 137
Query: 153 RRR 155
R++
Sbjct: 138 RKK 140
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L C Y VT + L + D++L++V +P
Sbjct: 37 LRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDMD 96
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMSA D +VV+K + GA DYL+KP+R L NLW H+
Sbjct: 97 GFKLLEQVGLEMDL---PVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNLWQHVV 153
Query: 153 RRRR 156
R+R+
Sbjct: 154 RKRK 157
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 86/139 (61%), Gaps = 5/139 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSY-QVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+++IL+ D++ + V LL K Y +V V S R+ I+ + E +L+L ++ +P
Sbjct: 11 EIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELI--ENRSFNLVLCDLHMPD 68
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G+ ++K + + + P++MMSA +++++V KCL GA DYL+KP++ N + NLW +
Sbjct: 69 IDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLWQN 128
Query: 151 MWRRRRMLGLAEKNILSYD 169
+WR+R+ A N+LS++
Sbjct: 129 VWRKRKEKETA--NMLSHE 145
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + LL +C YQVT+ + L ++ DL++++V +P
Sbjct: 24 MRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMPDMD 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S+ + +V++ + GA DYL+KP+R EL N+W H+
Sbjct: 84 GFKLLELVGLEMDL---PVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQHVI 140
Query: 153 RRRRM 157
RR+++
Sbjct: 141 RRKKI 145
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 16/184 (8%)
Query: 23 SGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
SG+G D+ + +R+L+ D+D + +L C Y+VT+ + L + + D
Sbjct: 19 SGNGLSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYD 78
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
+++++V +P G K+L+++ + +L PV MMSA D +VV+K + GA DYL+KP+R
Sbjct: 79 IVISDVHMPDMDGFKLLEHVGLEMDL---PVTMMSADDSKNVVMKGVTHGACDYLIKPIR 135
Query: 141 TNELLNLWTHMWRRR----------RMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSD 190
L N+W H+ R+R + LG ++ L D D S S+ N N++ D
Sbjct: 136 MEALKNIWQHLVRKRQHEWKEKDLDQHLGSVDEQKLPEDLDYSLS-VSEENWNTSKKRKD 194
Query: 191 DTDD 194
+ D+
Sbjct: 195 EEDE 198
>gi|302805346|ref|XP_002984424.1| hypothetical protein SELMODRAFT_16707 [Selaginella moellendorffii]
gi|300147812|gb|EFJ14474.1| hypothetical protein SELMODRAFT_16707 [Selaginella moellendorffii]
Length = 73
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 51/73 (69%)
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
+IDL+L +V +P GL +L I K Q++PV+MMS+ D +VV KCL GAAD+LVK
Sbjct: 1 EIDLVLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVK 60
Query: 138 PLRTNELLNLWTH 150
P+R NEL NLW H
Sbjct: 61 PVRKNELKNLWQH 73
>gi|34979117|gb|AAQ83694.1| pseudo-response regulator protein [Oryza sativa Indica Group]
Length = 640
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRI-PVIMMSAQDEVSVVVKCLRLGAADYLVK 137
I +L EV +P G+ +L I + RI PVIMMS+ D + V KCL GA D+LVK
Sbjct: 5 IVFVLTEVVMPGVSGISLLSRIMNPQYFARIFPVIMMSSNDAMGTVFKCLSKGAVDFLVK 64
Query: 138 PLRTNELLNLWTHMWRR 154
P+R NEL NLW H+WRR
Sbjct: 65 PIRKNELKNLWQHVWRR 81
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 469 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+ R AA+IKFRQKRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 578 EHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 623
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL++C Y VT+ + L DL++++V +P
Sbjct: 29 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMD 88
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+R +L +W H+
Sbjct: 89 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVI 145
Query: 153 RRR 155
RR+
Sbjct: 146 RRK 148
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + LL +C YQVT+ + L ++ DL++++V +P
Sbjct: 24 MRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNFDLVISDVSMPDMD 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S+ + +V++ + GA DYL+KP+R EL N+W H+
Sbjct: 84 GFKLLELVGLEMDL---PVIMLSSHSDPKLVMRGITHGACDYLLKPVRIEELKNIWQHVI 140
Query: 153 RRRRM 157
RR+++
Sbjct: 141 RRKKI 145
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL++C Y VT+ + L DL++++V +P
Sbjct: 29 MRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMD 88
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+R +L +W H+
Sbjct: 89 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVI 145
Query: 153 RRR 155
RR+
Sbjct: 146 RRK 148
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
SG+ R + IL D+D+ AV L Y V++ + ++ ++ L + G+ DLI
Sbjct: 2 SGNLPFRRDDLHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVLKS-GNTFDLI 60
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
L++V +P+ G + L+ D ++IP+IMMS+ D+ +V CL GA DY++KPL
Sbjct: 61 LSDVMMPVMNGPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSKGADDYIIKPLTPQ 120
Query: 143 ELLNLWTHMWRRRRMLGLAEK 163
L N++ ++W +R+ A K
Sbjct: 121 VLKNMYANVWLKRKQNAAAAK 141
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC Y+VT+ ++ L + DL++++V++P
Sbjct: 21 MRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S+ + V K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELKNIWQHVI 137
Query: 153 RRRR 156
RR++
Sbjct: 138 RRKK 141
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
SGD F +R+L D+D + +LL +C Y VT+ + L DL+
Sbjct: 4 SGDRF--PIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLV 61
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+++V +P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 62 ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSAYGDTKLVMKGISHGACDYLLKPVRLE 118
Query: 143 ELLNLWTHMWRRRR 156
EL N+W H+ R+++
Sbjct: 119 ELKNIWQHVIRKKK 132
>gi|442756047|gb|JAA70183.1| Hypothetical protein [Ixodes ricinus]
Length = 202
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
L EV +P G+ +L I K + IPVIMMS+ D + +V KCL GA D+L+KP+R
Sbjct: 14 FLTEVVMPCFSGIGLLCKIMSHKTRKTIPVIMMSSHDSMGLVFKCLSEGAVDFLLKPIRK 73
Query: 142 NELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTN 201
NEL NLW H+WRR + + + V S +D NS SDD ++ N
Sbjct: 74 NELKNLWQHVWRRCQSSSGSGSEGGTQTQKSVKSKGTDMLGNSA---SDDGENNESNGLN 130
Query: 202 PEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPD 243
G +S A V S+ A+ PID PD
Sbjct: 131 AGDGSDDGSGAQSSWTKRAVEVDSSQ---ALSPIDNVAQCPD 169
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RIL D+D + +LL KC Y+VT+ ++ L + DL++++V++P
Sbjct: 21 MRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S+ + V K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRMEELKNIWQHVI 137
Query: 153 RRRR 156
RR++
Sbjct: 138 RRKK 141
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L D+D + +LL +C Y VT+ + L + D+++++V +P
Sbjct: 16 TGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPD 75
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 76 MDGFKLLELVGLEMDL---PVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 132
Query: 151 MWRRRRM 157
+ RR++
Sbjct: 133 VIRRKKF 139
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L D+D + +LL +C Y VT+ + L + D+++++V +P
Sbjct: 16 TGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDVHMPD 75
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R EL N+W H
Sbjct: 76 MDGFKLLELVGLEMDL---PVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 132
Query: 151 MWRRRRM 157
+ RR++
Sbjct: 133 VIRRKKF 139
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 12 CSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
C GAG S D F + +R+L+ D+D + +L +C Y VT+ +
Sbjct: 21 CKGAGADLMFS--DQF--PAGLRVLVVDDDITCLRLLEKMLCRCLYNVTTCSQATAALKL 76
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
L D++L++V +P G K+L+ + + +L PVIMMSA S V++ ++ GA
Sbjct: 77 LRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDL---PVIMMSADGRTSAVMRGIKHGA 133
Query: 132 ADYLVKPLRTNELLNLWTHMWRRR 155
DYL+KP+R EL N+W H+ R++
Sbjct: 134 CDYLIKPIREEELKNIWQHVIRKK 157
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL++C Y VT+ + L DL++++V +P
Sbjct: 24 MRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPDMD 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 84 GFKLLELVGLEMDL---PVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQHVI 140
Query: 153 RRR 155
RR+
Sbjct: 141 RRK 143
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL++C Y VT+ + L DL++++V +P
Sbjct: 24 MRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDVHMPDMD 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 84 GFKLLELVGLEMDL---PVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQHVI 140
Query: 153 RRR 155
RR+
Sbjct: 141 RRK 143
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+ + +LL +C YQ T R + L D DL++++V +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIM SA E+ ++K + GA DYLVKP+ ++ N+W H+W
Sbjct: 76 GFKLLELIGLEMDL---PVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 153 RRRRM 157
R+R++
Sbjct: 133 RKRKL 137
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL KC Y VT+ + ++ L + DL++++V++P
Sbjct: 11 MRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLVISDVNMPDMD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S + V++ + GA DYL KP+R EL N+W H+
Sbjct: 71 GFKLLELVGLEMDL---PVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQNIWQHVL 127
Query: 153 RRR 155
RRR
Sbjct: 128 RRR 130
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+ + +LL +C YQ T R + L D DL++++V +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIM SA E+ ++K + GA DYLVKP+ ++ N+W H+W
Sbjct: 76 GFKLLELIGLEMDL---PVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 153 RRRRM 157
R+R++
Sbjct: 133 RKRKL 137
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+ + +LL +C YQ T R + L D DL++++V +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIM SA E+ ++K + GA DYLVKP+ ++ N+W H+W
Sbjct: 76 GFKLLELIGLEMDL---PVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 153 RRRRM 157
R+R++
Sbjct: 133 RKRKL 137
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+ + +LL +C YQ T R + L D DL++++V +
Sbjct: 31 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 90
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIM SA E+ ++K + GA DYLVKP+ ++ N+W H+W
Sbjct: 91 GFKLLELIGLEMDL---PVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 147
Query: 153 RRRRM 157
R+R++
Sbjct: 148 RKRKL 152
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D+D V +L C Y+VT+ + + ++ L + D++L++V +P G
Sbjct: 7 VLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHMPDMDGF 66
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
K+L+ I + L PV+MMSA + SVV++ + GA DYL+KP+R EL N+W H+ RR
Sbjct: 67 KLLEIIQFELAL---PVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHVVRR 123
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +LV+C Y T+ + + L D+I+++V +P
Sbjct: 16 MKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDVIISDVHMPDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 76 GFRLLELVGLEMDL---PVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 132
Query: 153 RRR 155
R++
Sbjct: 133 RKK 135
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 20 SKSSGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
S +S G D+ + +R+L+ D+D + +L C Y+VT + L +
Sbjct: 2 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 61
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D+++++V +P G K+L+ I + +L PVIMMSA D +VV+K + GA DYL+K
Sbjct: 62 GYDIVISDVHMPDMDGFKLLELIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIK 118
Query: 138 PLRTNELLNLWTHMWRRRR 156
P+R L N+W H+ R+R+
Sbjct: 119 PIRIEALKNIWQHVVRKRK 137
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + SLL++C Y VT+ + L DL++++V +P
Sbjct: 21 MRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDVHMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+R +L +W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVV 137
Query: 153 RR 154
RR
Sbjct: 138 RR 139
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 23 SGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
SGD D+ + +R+L+ D+D + +L C Y+VT + L + D
Sbjct: 21 SGDVVTDQFPAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLLRENKNGFD 80
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
+++++V +P G K+L+ + + +L PVIMMSA D SVV+K + GA DYL+KP+R
Sbjct: 81 IVISDVHMPDMDGFKLLEQVGLEMDL---PVIMMSADDGQSVVMKGVTHGACDYLIKPVR 137
Query: 141 TNELLNLWTHMWRRRR 156
L N+W H+ R+++
Sbjct: 138 IEALKNIWQHVVRKKK 153
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + L+ C Y VT+ P + ++ L + DL++++V +P
Sbjct: 21 MRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDVSMPEMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L P IM+S D+ V+K + GA DYLVKP+R EL N+W H+
Sbjct: 81 GFKLLEQVGLEIDL---PFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVV 137
Query: 153 RRR-----RMLGLAEKNILSYDFDLVASDPSDANTNST 185
R++ R G+ I S D S + AN N T
Sbjct: 138 RKKIESKDRNKGIITDGICSQD----TSSENIANRNKT 171
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+ + +LL +C YQ T R + L D DL++++V +
Sbjct: 16 LRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVHMLDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIM SA E+ ++K + GA DYLVKP+ ++ N+W H+W
Sbjct: 76 GFKLLELIGLEMDL---PVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQHVW 132
Query: 153 RRRRM 157
R+R++
Sbjct: 133 RKRKL 137
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + + L +C Y VT+ + L + DL++++V +P
Sbjct: 18 MRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLRENKNKFDLVISDVHMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R EL N+W H+
Sbjct: 78 GFKLLELVGLEMDL---PVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVI 134
Query: 153 RRRRM 157
RR+++
Sbjct: 135 RRKKV 139
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D V +L KC Y VTS S ++ L + + D++L++V +P
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I D + IPV+MMS + SVV++ + GA DYL+KP+R +EL N+W H+
Sbjct: 72 GFKLLEQIALDID---IPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVV 128
Query: 153 RR 154
R+
Sbjct: 129 RK 130
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 20 SKSSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
+ G G D+ V R+L D+D + LL C Y VT+ + L +
Sbjct: 13 ANGGGHGAKDQFPVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLLREKKD 72
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
DL++++V +P G K+L+ + + +L PVIM+SA E V+K + GA DYL+K
Sbjct: 73 QFDLVISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLK 129
Query: 138 PLRTNELLNLWTHMWRRR 155
P+R +L +W H+ RRR
Sbjct: 130 PVRIEQLRTIWQHVVRRR 147
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 8/147 (5%)
Query: 12 CSGAGIGNSKSSGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVI 69
C G+ S +S G D+ + +R+L+ D+D + +L C Y+VT +
Sbjct: 7 CKGS---MSTASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIAL 63
Query: 70 DALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRL 129
L + D+++++V +P G K+L+ I + +L PVIMMSA D +VV+K +
Sbjct: 64 SLLRENRNGYDIVISDVHMPDMDGFKLLELIGLEMDL---PVIMMSADDGKNVVMKGVTH 120
Query: 130 GAADYLVKPLRTNELLNLWTHMWRRRR 156
GA DYL+KP+R L N+W H+ R+R+
Sbjct: 121 GACDYLIKPIRIEALKNIWQHVVRKRK 147
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 15 AGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL-- 72
A +S ++ G S +++L+ D+D V ++L +C+Y+V + S + + L
Sbjct: 16 AAASSSGATDCGLFSPSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRD 75
Query: 73 -NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
DL+L++V +P G K+L++I + +L PVIMMS+ + VV++ + GA
Sbjct: 76 RQEHNHQFDLVLSDVYMPDMDGFKLLEHIGLELDL---PVIMMSSNGDTDVVLRGVTHGA 132
Query: 132 ADYLVKPLRTNELLNLWTHMWRRRRM 157
D+L+KP+R EL N+W H+ RRR +
Sbjct: 133 VDFLIKPVRVEELRNVWQHVVRRRSL 158
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ ILL D+D+ S V ++L C YQV +++ P + +D L A DL++ ++ +P
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL++ K + ++ +L PVIMMSA ++ SV++K L G A Y+VKP+ +++ ++W +
Sbjct: 69 GLQLQKKVMQEFKL---PVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQY 123
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +L +C Y+VT R+ + + L + S D++L+++ +P
Sbjct: 24 IRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMPDIS 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GLK+L+ I + ++ PV+MMS+ ++ ++K + GA DY VKP+R + + +W H+
Sbjct: 84 GLKLLEIIGLEMDM---PVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHVI 140
Query: 153 RRRR 156
R+RR
Sbjct: 141 RKRR 144
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +++L+ D+D + +L +C Y VT+ + L D+++++V +P
Sbjct: 7 TGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISDVHMPD 66
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ I + IPVIMMSA E V+K + GA DYLVKP+R EL N+W H
Sbjct: 67 MDGFKLLELIGLE---MGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIWQH 123
Query: 151 MWRRR 155
+ RRR
Sbjct: 124 VVRRR 128
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +++L+ D+D + +L +C Y VT+ + L D+++++V +P
Sbjct: 7 TGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISDVHMPD 66
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ I + IPVIMMSA E V+K + GA DYLVKP+R EL N+W H
Sbjct: 67 MDGFKLLELIGLE---MGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIWQH 123
Query: 151 MWRRR 155
+ RRR
Sbjct: 124 VVRRR 128
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +L +C Y+VT R+ + + L + S D++L+++ +P
Sbjct: 24 IRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSSRFDIVLSDLHMPDIS 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GLK+L+ I + ++ PV+MMS+ ++ ++K + GA DY VKP+R + + +W H+
Sbjct: 84 GLKLLEIIGLEMDM---PVVMMSSDEKRETIMKGIIHGACDYWVKPVRMDAIQLVWQHVI 140
Query: 153 RRRR 156
R+RR
Sbjct: 141 RKRR 144
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y VT+ + + L D+I+++V +P
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 75 GFRLLELVGLEMDL---PVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 131
Query: 153 RRR 155
R++
Sbjct: 132 RKK 134
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y T+ + + L D+I+++V +P
Sbjct: 17 MKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDVIISDVHMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 77 GFRLLELVGLEMDL---PVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKNIWQHVV 133
Query: 153 RRR 155
R++
Sbjct: 134 RKK 136
>gi|325179822|emb|CCA14225.1| protein kinase putative [Albugo laibachii Nc14]
Length = 935
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D S VRIL+ ++D+ + A +L C Y V++V + ++ + L DL+L +V
Sbjct: 1 MDPSDVRILVVEDDAFTRIATIDILQSCKYNVSAVENGKEALQTLQQSYQQYDLVLCDVM 60
Query: 88 LPMTKGLKMLKYI-TRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
LP G+++L+ I IP++M S + + VV CL GA DYL+KP++ N
Sbjct: 61 LPCMTGIELLEAIQAHPTRFNHIPIVMTSCNEGMDVVKNCLSKGAKDYLIKPIQVNTAKT 120
Query: 147 LWTHMWRRRR 156
L H+W R+
Sbjct: 121 LVRHVWLHRQ 130
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +LL ++D ++ V ++L C + VT+ + ++ IDAL S IDL+L ++ +P
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 93 GLKMLKYI-TRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL+++K + + DK + IP+I+MS D KC GA DYLVKP++ ++ +L H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARH 171
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 468 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
+RR A+ +F +KRKER FDKK+RY +RKRLAE RPRV+GQFVR
Sbjct: 608 AERRAEAIARFLKKRKERNFDKKVRYASRKRLAEARPRVKGQFVR 652
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L DL++++V +P
Sbjct: 20 MRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDVHMPDMD 79
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 80 GFKLLELVGLEMDL---PVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHVV 136
Query: 153 RRRRMLGLAEKNILSY--DFD-LVASDPSDANTNSTTLFSDDTDDKSRR 198
RR+ E++ L DF+ L ++DP + T SD + S++
Sbjct: 137 RRK--FSKRERSNLDIYKDFNKLPSADPCHGHNQITAGASDQSGRISKK 183
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 17 IGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEG 76
IG+ + D + +R+LL D DSNS + +L+++ SYQVT + + L
Sbjct: 25 IGSPINDDDEEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNK 84
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLV 136
+IDL++ + +P GL L I ++ +L PV++MS + V++ ++ GA D+LV
Sbjct: 85 QEIDLVIWDFHMPDINGLDALNTIGKEMDL---PVVIMSHDHKKETVMESIKYGACDFLV 141
Query: 137 KPLRTNELLNLWTHMWRRR 155
KP+ + LW H++R+R
Sbjct: 142 KPVSKEVIAVLWRHVYRKR 160
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y VT+ + + L D+I+++V +P
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 75 GFRLLELVGLEMDL---PVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 131
Query: 153 RRR 155
R++
Sbjct: 132 RKK 134
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 29 DRS--KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
DRS + +L+ ++D+ A+ +L C YQVT+V + R D L S+ID++L ++
Sbjct: 3 DRSYQSIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKADSNIDIVLLDL 62
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
+P G+++L + + L+RIPVIMMS +E V C+ GA DYLVKPLR
Sbjct: 63 YMPEMDGIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGAKDYLVKPLR 116
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 24 GDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLIL 83
G+GF + +R+L D+D + L+ C+Y VT+ P + ++ L + DL++
Sbjct: 17 GEGF--PAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVI 74
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
++V +P G K+L+ + + +L P IM+S D++ V+K + GA +YLVKP+R E
Sbjct: 75 SDVSMPDMDGFKLLEQVGLEMDL---PFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEE 131
Query: 144 LLNLWTHMWRRR 155
L ++W H+ R++
Sbjct: 132 LKSIWQHVVRKK 143
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L DL++++V +P
Sbjct: 26 MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRENKDMFDLVISDVHMPDMD 85
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 86 GFKLLELVGLEMDL---PVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNVWQHVV 142
Query: 153 RRR 155
RR+
Sbjct: 143 RRK 145
>gi|307110656|gb|EFN58892.1| hypothetical protein CHLNCDRAFT_140816 [Chlorella variabilis]
Length = 1229
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN----AEGS-DIDLILAEVD 87
+ +L+ DN S + + LL Y +S + L A GS D+D+IL D
Sbjct: 6 ITVLVIDNTSARA-STLRLLEAAGYSTVEAQSGGSALQLLEERAAATGSPDVDVILKNHD 64
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
P + ++ L ++ L+ IP +++S QD VV+KCL GA D+ V+PLR NE+ L
Sbjct: 65 PPGSNAVRFLHRLSEHPSLRSIPTVVVSNQDSREVVLKCLSSGAVDFWVRPLRPNEVHML 124
Query: 148 WTHMWRRR 155
WT +WR++
Sbjct: 125 WTRVWRQQ 132
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 461 TEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVD 520
+E + + R A ++++KRK F KKIRY RK LA++RPRVRGQFVR
Sbjct: 904 SEEAFSTKEARLLAYARYKEKRKRLHFGKKIRYQTRKALADQRPRVRGQFVRMA------ 957
Query: 521 LNGQPSSVDYDEDEDEEEEMASRDSSPDN 549
+ +S ++ EE + +SPD+
Sbjct: 958 -KEEAASTGDNKSSGAEEGAGAPSASPDH 985
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Query: 23 SGDGFIDRSK--------VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNA 74
SGDG +S+ +R+L+ D+D + +L KC Y VT+ ++ L
Sbjct: 5 SGDGATCKSEATDTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRE 64
Query: 75 EGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
D++L++V +P G K+L+ + + +L P+IMMS ++V++ ++ GA DY
Sbjct: 65 RRGSFDVVLSDVHMPDMDGFKLLELVGLEMDL---PIIMMSGDGRTNLVMRGVQHGACDY 121
Query: 135 LVKPLRTNELLNLWTHMWRRR 155
L+KP+R EL N+W H+ R++
Sbjct: 122 LIKPIRDEELKNIWQHVVRKK 142
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y T+ + + L D+I+++V +P
Sbjct: 16 MKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 76 GFRLLELVGLEMDL---PVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVI 132
Query: 153 RRR 155
R++
Sbjct: 133 RKK 135
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L DL++++V +P
Sbjct: 22 MRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHMPDMD 81
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA E V+K + GA DYL+KP+R +L +W H+
Sbjct: 82 GFKLLELVGLEMDL---PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHVI 138
Query: 153 RR 154
RR
Sbjct: 139 RR 140
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L+ CSY+VT+ + L + DL++++VD+P
Sbjct: 12 MRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISDVDMPDMD 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMS E S V++ + GA DYL+KP+ EL N+W H+
Sbjct: 72 GFKLLELVGLEMDL---PVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVWQHVV 128
Query: 153 RRRR 156
R++R
Sbjct: 129 RKKR 132
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y T+ + + L D+I+++V +P
Sbjct: 16 MKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVHMPDMD 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 76 GFRLLELVGLEMDL---PVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVI 132
Query: 153 RRR 155
R++
Sbjct: 133 RKK 135
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +R+L+ D+D++ + +L++ YQVT ++ L DL+L++V +P
Sbjct: 9 SGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLVLSDVHMPG 68
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ + + +L PVIMMS + V+K + GA DYL+KP+R EL N+W H
Sbjct: 69 MNGYKLLQQVGLEMDL---PVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELKNIWQH 125
Query: 151 MWRRR 155
+ RR+
Sbjct: 126 VVRRK 130
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L+ C Y VT+ + + L D+I+++V +P
Sbjct: 15 MKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP+R EL N+W H+
Sbjct: 75 GFRLLELVGLEMDL---PVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV 131
Query: 153 RRR 155
R++
Sbjct: 132 RKK 134
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L DL++++V +P
Sbjct: 21 MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDVHMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVV 137
Query: 153 RRR 155
RR+
Sbjct: 138 RRK 140
>gi|294464214|gb|ADE77622.1| unknown [Picea sitchensis]
Length = 214
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 46/52 (88%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+ +N+ +REAAL KFRQKRKERCF+KK+RY +RK+LAE+RPRVRGQFVR+
Sbjct: 153 IDINRSAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQT 204
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN--AEGSDIDLILAEVDL 88
+ +R+L D+D + L C+Y T V R +D L EG+ DL++++V +
Sbjct: 8 AGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVISDVIM 67
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW 148
P G K+L+ I + +L PVIM+SA E ++K ++ GA DY+VKP+R +L +W
Sbjct: 68 PNMDGFKLLELIGLEMDL---PVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIW 124
Query: 149 THMWR 153
TH+ +
Sbjct: 125 THVVK 129
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
S DG +R+L D++ + +LL +C Y+VT+ + ++ L + D++
Sbjct: 146 SPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRXNFDIV 205
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+ +V +P G +LK I + + IPVIM S D+ S V+K +R GA DYL+KP+R
Sbjct: 206 ITDVKMPDMDGFTLLKIIGLEMD---IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVL 262
Query: 143 ELLNLWTHMWRR 154
E+ N+W H+ R+
Sbjct: 263 EIKNIWQHVVRK 274
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 23 SGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
S DG +R+L D++ + +LL +C Y+VT+ + ++ L + D++
Sbjct: 138 SPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIV 197
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+ +V +P G +LK I + + IPVIM S D+ S V+K +R GA DYL+KP+R
Sbjct: 198 ITDVKMPDMDGFTLLKIIGLEMD---IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVL 254
Query: 143 ELLNLWTHMWRR 154
E+ N+W H+ R+
Sbjct: 255 EIKNIWQHVVRK 266
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN--AEGSDIDLILAEVDL 88
+ +R+L D+D + L C+Y T V R +D L +G+ DL++++V +
Sbjct: 8 AGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVISDVVM 67
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW 148
P G K+L+ I + +L PVIM+SA +E ++K ++ GA DY+VKP+R +L +W
Sbjct: 68 PNMDGFKLLELIGLEMDL---PVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGIW 124
Query: 149 THMWRRRR 156
TH+ + +
Sbjct: 125 THVVKNGK 132
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +L+ ++D+ A+ +L C YQVT+V + R D L + S+ID++L ++ +P
Sbjct: 3 IHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDELLKQDSNIDIVLLDLYMPEMD 62
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
G ++L + + LQ+IPVIMMS+ E V C+ GA DY+ KPLR
Sbjct: 63 GFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDYIFKPLRV 111
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L DL++++V +P
Sbjct: 21 MRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLFDLVISDVHMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQHVV 137
Query: 153 RRR 155
RR+
Sbjct: 138 RRK 140
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 25 DGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLI 82
D F DR + R+L D+D S + +LL C Y VT+ + L DL+
Sbjct: 2 DDFSDRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLV 61
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
+AEV +P GLK+L+ + + +L PVIM+SA E +V+K + GA D+L+KP+R
Sbjct: 62 IAEVHMPDMDGLKLLELVGLEMDL---PVIMLSAHGETELVMKAISHGARDFLLKPVRLE 118
Query: 143 ELLNLWTHMWRRR 155
EL N+W H+ R +
Sbjct: 119 ELRNIWQHVIRNK 131
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L DL++++V +P
Sbjct: 24 MRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMFDLVISDVHMPDMD 83
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 84 GFKLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELKNIWQHVV 140
Query: 153 RRR 155
RR+
Sbjct: 141 RRK 143
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y VT+ + + L D+I+++V +P
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+ ++ GA DYL+KP+R EL N+W H+
Sbjct: 75 GFRLLELVGLEMDL---PVIMMSADSRTDIVMNGIKHGACDYLIKPVRMEELKNIWQHVI 131
Query: 153 RRR 155
R++
Sbjct: 132 RKK 134
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D V +L KCSY VT+ + ++ L + ++ DL+L++ L
Sbjct: 26 AGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFLVS 85
Query: 91 TK---GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
+ G K+L+ + + +L PVIMMS+ + S V++ + GA DYL+KP+R EL NL
Sbjct: 86 SSDMDGFKLLEVVGLEMDL---PVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNL 142
Query: 148 WTHMWRRRRML 158
W H+ RRRR L
Sbjct: 143 WQHVVRRRRQL 153
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D + +L++C Y VT+ + + L D+I+++V +P
Sbjct: 15 MKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMD 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + + +L PVIMMSA +V+ ++ GA DYL+KP+R EL N+W H+
Sbjct: 75 GFRLLELVGLEMDL---PVIMMSADSRTDIVMNGVKHGACDYLIKPVRMEELKNIWQHVI 131
Query: 153 RRR 155
R++
Sbjct: 132 RKK 134
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D + +L +C Y VT+ + L D++L++V +P
Sbjct: 7 AGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPD 66
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ + + +L PVIMMSA S V++ + GA DYL+KP+R EL N+W H
Sbjct: 67 MDGFKLLELVGLEMDL---PVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNIWQH 123
Query: 151 MWRRR 155
+ R++
Sbjct: 124 VIRKK 128
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+L+ D+D V +L KCSY+VT + ++ L + ++ DL+L++V +P
Sbjct: 3 AGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYMPD 62
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G ++L+ + + +L PVIMMS+ + S V++ + GA DYL+KP+R EL NLW H
Sbjct: 63 MDGFRLLELVGLEMDL---PVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQH 119
Query: 151 M 151
+
Sbjct: 120 V 120
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y+VT+ + L DL++++V +P
Sbjct: 21 MRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLFDLVISDVHMPDMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 81 GFKLLELVGLEMDL---PVIMLSVNGETKTVMKGITHGACDYLLKPVRLEELRNIWQHVV 137
Query: 153 RRR 155
RR+
Sbjct: 138 RRK 140
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L + DL++++V +P
Sbjct: 18 MRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA D+ +V+K + GA DYL+KP+R +L N+W H+
Sbjct: 78 GFKLLELVGLEMDL---PVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQHVI 134
Query: 153 RRRRM 157
RRRR
Sbjct: 135 RRRRF 139
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L + DL++++V +P
Sbjct: 18 MRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA D+ +V+K + GA DYL+KP+R +L N+W H+
Sbjct: 78 GFKLLELVGLEMDL---PVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQHVI 134
Query: 153 RRRRM 157
RRRR
Sbjct: 135 RRRRF 139
>gi|425856114|gb|AFX97565.1| TOC1, partial [Hordeum vulgare subsp. vulgare]
gi|425856116|gb|AFX97566.1| TOC1, partial [Hordeum vulgare subsp. vulgare]
Length = 194
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 158 LGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPV 217
LGLAEKN + +LV S+PSDANTNSTTL SD+TDDK + + N E S+ E ES P
Sbjct: 1 LGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNTSSQYEYES-PA 59
Query: 218 ATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELRIGESSAFFTYVKSNMP 277
A ++ D + P G+ R P K LRI ESSAF YVKS+ P
Sbjct: 60 ADPPKTDQLENLPSIAEDDDNASSPG--GMFSR----PIKTNLRIAESSAFLAYVKSSTP 113
Query: 278 RDSS 281
+SS
Sbjct: 114 ANSS 117
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +L+ ++D+ A+ +L C+YQVT V + R D L E S+ID++L ++ +P
Sbjct: 11 IHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDELLKEDSNIDVVLLDLWMPEMD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G ++L + ++L+ IPVIMMSA +E V CL GA DYLVKP+R + + H+
Sbjct: 71 GWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLAHGAKDYLVKPIRIQMVKGIANHV 129
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 12 CSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDA 71
C GAG S D F + +R+L+ D+D + + +C Y VT+ +
Sbjct: 21 CKGAGADVIVS--DQF--PAGLRVLVVDDDITCLRLLEKMPRRCLYHVTTCSQATAALKL 76
Query: 72 LNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGA 131
L D++L++V +P G K+L+ + + +L PVIMMSA S V++ + GA
Sbjct: 77 LRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDL---PVIMMSADGRTSAVMRGISHGA 133
Query: 132 ADYLVKPLRTNELLNLWTHMWRRR 155
DYL+KP+R EL N+W H+ R++
Sbjct: 134 CDYLIKPIREEELKNIWQHVIRKK 157
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y VT+ + L + DL++++V +P
Sbjct: 18 MRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDVHMPDMD 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+SA D+ +V+K + GA DYL+KP+R +L N+W H+
Sbjct: 78 GFKLLELVGLEMDL---PVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQHVI 134
Query: 153 RRRRM 157
RRRR
Sbjct: 135 RRRRF 139
>gi|20466420|gb|AAM20527.1| unknown protein [Arabidopsis thaliana]
gi|22136356|gb|AAM91256.1| unknown protein [Arabidopsis thaliana]
Length = 311
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 259 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 304
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D+D + +LL +C Y V + + L DL++++V +P
Sbjct: 28 MRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDVHMPDMD 87
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIM+S E V+K + GA DYL+KP+R EL N+W H+
Sbjct: 88 GFKLLELVGLEMDL---PVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQHVV 144
Query: 153 RRR 155
RR+
Sbjct: 145 RRK 147
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 5/134 (3%)
Query: 22 SSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
+ G+GF +R+L+ D+D + +L++C Y VT+ + + L + DL
Sbjct: 6 TDGEGF--PIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDL 63
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P G K+L+ I + +L PVIMMS E SVV++ + GA DYL+KP+R
Sbjct: 64 VISDVYMPDMDGFKLLELIGLEMDL---PVIMMSGNGETSVVMEGITHGACDYLLKPVRI 120
Query: 142 NELLNLWTHMWRRR 155
EL N+W H+ R+R
Sbjct: 121 EELRNIWQHVVRKR 134
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 5/134 (3%)
Query: 22 SSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
+ G+GF +R+L+ D+D + +L++C Y VT+ + + L + DL
Sbjct: 6 TDGEGF--PIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDL 63
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P G K+L+ I + +L PVIMMS E SVV++ + GA DYL+KP+R
Sbjct: 64 VISDVYMPDMDGFKLLELIGLEMDL---PVIMMSGNGETSVVMEGITHGACDYLLKPVRI 120
Query: 142 NELLNLWTHMWRRR 155
EL N+W H+ R+R
Sbjct: 121 EELRNIWQHVVRKR 134
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V+IL+ D+D+ + V S+L CS QV +V++P + +L + DL++ ++ +P
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G+++ K I D+E +IPV++MS+ + S +++ L GA Y+VKP+ +L N+W +
Sbjct: 81 GIQLQKQI--DEEF-KIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAM 137
Query: 153 RRRR 156
++
Sbjct: 138 ASKK 141
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +LL ++ A+ LL C+YQV + + Q D L ++ DLIL ++ LP
Sbjct: 14 INVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEMT 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL++L+ I +L+ +PVIMMS DE V CL GA DY+VKP+ +L L T +
Sbjct: 74 GLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGLQTFVK 133
Query: 153 RR 154
++
Sbjct: 134 KK 135
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSY-----------------QVTSVRSPRQVIDALNAE 75
+R+LL D + + LL+ C Y +VT + R ++ L+
Sbjct: 25 MRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITYVWRVDEVTPKTAARDAVEELHEN 84
Query: 76 GSDIDLILAEVDLPM-TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
D++L EV P G +L+Y D +L PV++ SA D+ V+KC+ GA DY
Sbjct: 85 PWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDL---PVVVFSADDDKRTVLKCVNSGACDY 141
Query: 135 LVKPLRTNELLNLWTHMWRRR 155
LVKPLR EL N+W H++RR+
Sbjct: 142 LVKPLRHEELKNIWQHVYRRK 162
>gi|168065350|ref|XP_001784616.1| circadian clock protein PRR3 [Physcomitrella patens subsp. patens]
gi|162663848|gb|EDQ50591.1| circadian clock protein PRR3 [Physcomitrella patens subsp. patens]
Length = 774
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 9/87 (10%)
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVI---------MMSAQDEVSVVVKCL 127
S+ DL+L +V +P G+ +L + + + +R+P++ +MS+ D + +V +C+
Sbjct: 19 SNFDLVLTDVVMPCLSGVGLLSKMMKREACKRVPIVSELSYMLDAVMSSYDSLDIVFRCI 78
Query: 128 RLGAADYLVKPLRTNELLNLWTHMWRR 154
GA DYLVKP+R NEL NLW H+WR+
Sbjct: 79 SKGACDYLVKPVRKNELRNLWQHVWRK 105
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 41/81 (50%), Gaps = 30/81 (37%)
Query: 454 SYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKK----------------------- 490
S GN TE + RREAAL KFRQKRKERCF+KK
Sbjct: 622 SGGNGLCTE--QIRFARREAALNKFRQKRKERCFEKKVQASCIWAAVASDGHHGASVCGE 679
Query: 491 -----IRYVNRKRLAERRPRV 506
+RY +RK+LAE+RPRV
Sbjct: 680 KRGCVVRYQSRKKLAEQRPRV 700
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +LL ++ A+ LL C+YQV + + Q D L ++ DLIL ++ LP
Sbjct: 14 INVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDELLKTENEFDLILLDLGLPEMT 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL++L+ I +L+ +PVIMMS DE V CL GA DY+VKP+ +L L T +
Sbjct: 74 GLELLQIIKAIDKLKDVPVIMMSGDDETETVAACLNAGAEDYMVKPVNFKKLQGLQTFVK 133
Query: 153 RR 154
++
Sbjct: 134 KK 135
>gi|42571259|ref|NP_973703.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|330255659|gb|AEC10753.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 351
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 299 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 344
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 114 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
MS+QD + +V+KC+ GAADYL+KP+R NEL NLW H+WRR
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + + LL+KCSY+VT+ ++ R+ + + +DL++++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +L+ +T IP ++M++ + + V+K + GA+D+L+KP+R EL N+W H++
Sbjct: 71 GLLILQEVTSKFG---IPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIF 127
Query: 153 RRR 155
R++
Sbjct: 128 RKQ 130
>gi|51968564|dbj|BAD42974.1| hypothetical protein [Arabidopsis thaliana]
gi|62320037|dbj|BAD94182.1| hypothetical protein [Arabidopsis thaliana]
Length = 258
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 206 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 251
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Query: 24 GDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLIL 83
GD F + + +R+L D + + ++L KC Y+VTS + + L +D +++
Sbjct: 19 GDMF-NPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVI 77
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
+V G K+L+ I + +L PVI++SA+D S ++K +R GA DYL+KP+R E
Sbjct: 78 TDVKRLDMDGFKLLEIIGLEMDL---PVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQE 134
Query: 144 LLNLWTHMWRRR 155
+ N+W H+ R+R
Sbjct: 135 MQNIWQHVVRKR 146
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 5/135 (3%)
Query: 24 GDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
GD ID+ + R+L D+D + +LL +C Y VT+ + L + DL
Sbjct: 8 GDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLRENKNKFDL 67
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P G K+L+ + + +L PVIM+SA + +V+K + GA DYL+KP+R
Sbjct: 68 VISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGDPKLVMKGITHGACDYLLKPVRI 124
Query: 142 NELLNLWTHMWRRRR 156
EL N+W H+ RRR+
Sbjct: 125 EELKNIWQHVIRRRK 139
>gi|327342126|gb|AEA50850.1| aprr5 [Populus tremula]
Length = 412
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
RREAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+
Sbjct: 359 RREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 404
>gi|42569980|ref|NP_182190.2| CCT motif family protein [Arabidopsis thaliana]
gi|225898603|dbj|BAH30432.1| hypothetical protein [Arabidopsis thaliana]
gi|330255644|gb|AEC10738.1| CCT motif family protein [Arabidopsis thaliana]
Length = 183
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 42/45 (93%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 132 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 176
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL---NAEGSDIDLILAEVDLPMT 91
++L ++D+ V LL K SY+V++ + L G +DLIL ++ +P
Sbjct: 8 VVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILMPEV 67
Query: 92 KGLKMLKYITRDKELQRIPVI----------------------MMSAQDEVSVVVKCLRL 129
G ++ + + IPV+ +MS+QD V++ +
Sbjct: 68 TGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQAFQA 127
Query: 130 GAADYLVKPLRTNELLNLWTHMWRRRRMLG 159
GAADYL+KP+R NEL LW H+WR R G
Sbjct: 128 GAADYLIKPIRKNELATLWQHVWRANRAKG 157
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 477 KFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
K+ +KRK R F KK+RY +RKRLAE RPRVRGQFV+
Sbjct: 487 KYLEKRKHRNFQKKVRYESRKRLAEARPRVRGQFVK 522
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +RILL D+D++ + +L++ YQVT + L DL+L++V +P
Sbjct: 9 SGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPG 68
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ + EL +PVIMMS + V+ + GA DYL+KP+R EL N+W H
Sbjct: 69 MNGYKLLQQVGL-LELD-LPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 151 MWRRR 155
+ RR+
Sbjct: 127 VVRRK 131
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + + LL+KCSY+VT+ ++ R+ + + +DL++++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +L+ +T IP ++M++ + + V+K + GA D+L+KP+R EL N+W H++
Sbjct: 71 GLLILQEVTSKFG---IPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 153 RRR 155
R++
Sbjct: 128 RKQ 130
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D++ + +LL +C Y+VT+ + ++ L + D+++ +V +P
Sbjct: 19 LRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVITDVKMPDMD 78
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G +LK I + + IPVIM S D+ S V+K +R GA DYL+KP+R E+ N+W H+
Sbjct: 79 GFTLLKIIGLEMD---IPVIMTSVNDDRSTVLKGIRHGARDYLLKPVRVLEIKNIWQHVV 135
Query: 153 RR 154
R+
Sbjct: 136 RK 137
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + + LL+KCSY+VT+ ++ R+ + + +DL++++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +L+ +T IP ++M++ + + V+K + GA D+L+KP+R EL N+W H++
Sbjct: 71 GLLILQEVTSKFG---IPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 153 RRR 155
R++
Sbjct: 128 RKQ 130
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + + LL+KCSY+VT+ ++ R+ + + +DL++++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +L+ +T IP ++M++ + + V+K + GA D+L+KP+R EL N+W H++
Sbjct: 71 GLLILQEVTSKFG---IPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 153 RRR 155
R++
Sbjct: 128 RKQ 130
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++L+ D+D+ + +L +C Y VT+ S + + L S DL++++V +P
Sbjct: 15 LKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMPDMD 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIMMS E+ V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 75 GFKLLEAIGLELDL---PVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHVV 131
Query: 153 RR 154
R+
Sbjct: 132 RK 133
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Query: 51 LLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIP 110
+L KCSY++T+ R + L + D+I+++V++P G ++L+++ + +L P
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDL---P 57
Query: 111 VIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 155
VI++S E++ V+K ++ GA DYL+KP+R EL N+W H+ R++
Sbjct: 58 VILISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKK 102
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQ--------VTSVRSPRQVIDALNAEGSDIDLIL 83
K++IL+ D+DS S V ++L CSY+ V +V++P + L + DL++
Sbjct: 17 KIKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLVV 76
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
++ +P G+++ + + D+E ++PVI+MS+ D V+++ L GAA Y+VKP+ ++
Sbjct: 77 TDLHMPEMNGMELQQQV--DEEF-KLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDD 133
Query: 144 LLNLWTH 150
L N+W +
Sbjct: 134 LKNVWQY 140
>gi|297746177|emb|CBI16233.3| unnamed protein product [Vitis vinifera]
Length = 103
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
G V+ ++ +REAAL KFRQKRKERCF+KK+RY +RK+LAE+RPR+RGQFVR+
Sbjct: 18 GKGGGNRVEEDRFAQREAALTKFRQKRKERCFEKKVRYQSRKKLAEQRPRIRGQFVRQ 75
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +++L+ D++ + V +L C Y VT+ S + + L + DL++++V +P
Sbjct: 2 AGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMPD 61
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ I + +L PVIMMS E V+K +R GA DYL+KP+R EL+N+W H
Sbjct: 62 MDGFKLLEAIGLELDL---PVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQH 118
Query: 151 MWRR 154
+ R+
Sbjct: 119 VVRK 122
>gi|383325728|ref|YP_005386581.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491612|ref|YP_005409288.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|451814975|ref|YP_007451427.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|359275048|dbj|BAL32566.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278218|dbj|BAL35735.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|451780944|gb|AGF51913.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
Length = 603
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 17 IGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEG 76
+GN K++G + K +IL+ D++ ++ D F L + + VT+ S + V+ L ++
Sbjct: 174 LGNIKTNGVDSRELLKGKILVVDDNPSNLDLFFQHLTRKGHAVTTCLSAKDVLGLLQSQ- 232
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLV 136
+ DLIL ++ +P T G + L+Y+ E Q IPVI++SA DE +++C+ +GA D+L
Sbjct: 233 -NYDLILLDLLMPETNGDQFLEYLKTSVEFQHIPVIIVSALDEFESIIRCIEMGAEDFLP 291
Query: 137 KPL 139
KP
Sbjct: 292 KPF 294
>gi|224132558|ref|XP_002321351.1| response regulator [Populus trichocarpa]
gi|222868347|gb|EEF05478.1| response regulator [Populus trichocarpa]
Length = 477
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 43/46 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
+REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+V+
Sbjct: 422 QREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 467
>gi|302805348|ref|XP_002984425.1| hypothetical protein SELMODRAFT_120328 [Selaginella moellendorffii]
gi|300147813|gb|EFJ14475.1| hypothetical protein SELMODRAFT_120328 [Selaginella moellendorffii]
Length = 90
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 458 SPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
+P+ N RREAAL KFRQKRKERCF+KK+RY +RKRLAE+RPRVRGQFV
Sbjct: 22 APAENAANNSKVRREAALNKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFV 75
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 22 SSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI 79
S+ DG D+ V R+L D++ + LL++C Y VT R+ ++ L +
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMF 64
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL++++V++P T G K+L+ I + +L PVIM+SA + V+K + GA DYLVKP+
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDL---PVIMLSAHSDYDSVMKGIIHGACDYLVKPV 120
Query: 140 RTNELLNLWTHMWRRRRMLGLAEKNILSY 168
EL N+W H + +KNI SY
Sbjct: 121 GLKELQNIWHH---------VVKKNIKSY 140
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 22 SSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI 79
S+ DG D+ V R+L D++ + LL++C Y VT R+ ++ L +
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMF 64
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL++++V++P T G K+L+ I + +L PVIM+SA + V+K + GA DYLVKP+
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDL---PVIMLSAHSDYDSVMKGIIHGACDYLVKPV 120
Query: 140 RTNELLNLWTHMWRRRRMLGLAEKNILSY 168
EL N+W H + +KNI SY
Sbjct: 121 GLKELQNIWHH---------VVKKNIKSY 140
>gi|356514272|ref|XP_003525830.1| PREDICTED: uncharacterized protein LOC100778877 [Glycine max]
Length = 424
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 70 DALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRL 129
+ L + ++DLIL EV+LP G + I +RI VIMMS+ D V++ +KC+
Sbjct: 29 EMLKKKAPELDLILTEVELPAISGFALFSLIMEHDICKRILVIMMSSHDSVNMALKCMLN 88
Query: 130 GAADYLVKPLRTNELLNLWTHM 151
GA ++L+KP+R NEL NLW H+
Sbjct: 89 GAINFLIKPIRKNELRNLWQHI 110
>gi|414588534|tpg|DAA39105.1| TPA: hypothetical protein ZEAMMB73_940919 [Zea mays]
gi|414588535|tpg|DAA39106.1| TPA: hypothetical protein ZEAMMB73_940919 [Zea mays]
Length = 402
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 441 CLQPGQVSANSWPSYGNSPSTEVKMNKVDR--REAALIKFRQKRKERCFDKKIRYVNRKR 498
C G+ N+ + E + DR REAAL+KFR KRK+RCFDKK+RY +RK+
Sbjct: 314 CTGSGEADTNANTTVALESGNESGIQNSDRSHREAALMKFRMKRKDRCFDKKVRYHSRKK 373
Query: 499 LAERRPRVRGQFV 511
LAE+RPRV+GQFV
Sbjct: 374 LAEQRPRVKGQFV 386
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+ +N S L+ S VT+ + + L D+++++V++P
Sbjct: 19 LRVLVVDDXANIISLSNSFLLYAS--VTTCCLATEALKKLRERKEAYDIVISDVNMPDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ + + +L PVIMMS E S V+K ++ GA DYL+KP+R EL N+W H++
Sbjct: 77 GFKLLEQVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R+R
Sbjct: 134 RKR 136
>gi|226532884|ref|NP_001140611.1| uncharacterized protein LOC100272683 [Zea mays]
gi|194700176|gb|ACF84172.1| unknown [Zea mays]
Length = 379
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 441 CLQPGQVSANSWPSYGNSPSTEVKMNKVDR--REAALIKFRQKRKERCFDKKIRYVNRKR 498
C G+ N+ + E + DR REAAL+KFR KRK+RCFDKK+RY +RK+
Sbjct: 291 CTGSGEADTNANTTVALESGNESGIQNSDRSHREAALMKFRMKRKDRCFDKKVRYHSRKK 350
Query: 499 LAERRPRVRGQFV 511
LAE+RPRV+GQFV
Sbjct: 351 LAEQRPRVKGQFV 363
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +S R+LL DSNSS + +L+ + SYQVT S + + L +IDL++ +
Sbjct: 36 FLTKSN-RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDF 92
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P GL L I + +L PV++MS + + V++ ++ GA D+LVKP+ +
Sbjct: 93 HMPDINGLDALNIIGKQMDL---PVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAV 149
Query: 147 LWTHMWRRR 155
LW H++R+R
Sbjct: 150 LWRHVYRKR 158
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 13/136 (9%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D++ + LL++C Y VT R+ ++ L + DL++++V++P T
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K+L+ I + +L PVIM+SA + V+K + GA DYLVKP+ EL N+W H
Sbjct: 61 GFKLLE-IGLEMDL---PVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHH-- 114
Query: 153 RRRRMLGLAEKNILSY 168
+ +KNI SY
Sbjct: 115 -------VVKKNIKSY 123
>gi|293331705|ref|NP_001168046.1| uncharacterized protein LOC100381775 [Zea mays]
gi|223945677|gb|ACN26922.1| unknown [Zea mays]
Length = 210
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 441 CLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLA 500
C ++AN+ + + + ++ RREAAL+KFR KRK+RCF+KK+RY +RK+LA
Sbjct: 124 CSGEADINANTMVALESGNESGIQNGDRSRREAALMKFRMKRKDRCFEKKVRYHSRKKLA 183
Query: 501 ERRPRVRGQFV-RKVN 515
E+RPRV+GQFV +K+N
Sbjct: 184 EQRPRVKGQFVSQKLN 199
>gi|16330817|ref|NP_441545.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|383322559|ref|YP_005383412.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|384436879|ref|YP_005651603.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803]
gi|1653310|dbj|BAA18225.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|339273911|dbj|BAK50398.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803]
gi|359271878|dbj|BAL29397.1| regulatory component of sensory transduction system Rre22
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|407961825|dbj|BAM55065.1| regulatory components of sensory transductionsystem [Bacillus
subtilis BEST7613]
Length = 603
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 17 IGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEG 76
+GN K++G + K +IL+ D++ ++ D F L + + VT+ S + + L ++
Sbjct: 174 LGNIKTNGVDSRELLKGKILVVDDNPSNLDLFFQHLTRKGHAVTTCLSAKDALGLLQSQ- 232
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLV 136
+ DLIL ++ +P T G + L+Y+ E Q IPVI++SA DE +++C+ +GA D+L
Sbjct: 233 -NYDLILLDLLMPETNGDQFLEYLKTSVEFQHIPVIIVSALDEFESIIRCIEMGAEDFLP 291
Query: 137 KPL 139
KP
Sbjct: 292 KPF 294
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN--AEGSDIDLILAEVDLPM 90
+R+L D+D + L C+Y T V + +D L +G+ DL++++V +
Sbjct: 10 LRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVISDVVMTK 69
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G K+L+ I + +L PVIM+SA E ++K ++ GA DY+VKP+R +L +WTH
Sbjct: 70 MDGFKLLELIGLEMDL---PVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGIWTH 126
Query: 151 MWRRRRM 157
+ + ++
Sbjct: 127 VVKNSKI 133
>gi|327342130|gb|AEA50852.1| aprr9 [Populus tremula]
Length = 296
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 42/45 (93%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+REAAL KFR KRK+RC++K++RY +RKRLAE+RPRV+GQFVR+V
Sbjct: 243 QREAALTKFRLKRKDRCYEKRVRYQSRKRLAEQRPRVKGQFVRQV 287
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQ-VTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+L+ D++ + D + LV+ YQ + + + ++ ++ L+ G + DLIL ++ +P G
Sbjct: 9 LLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEMLS--GHNFDLILLDIQMPQMNG 66
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L Y+ D +L IPVIM+SA DE+ VV+C+ +GA DYL KP
Sbjct: 67 YELLAYLKADLKLSHIPVIMISAVDEIDSVVRCIEMGAEDYLHKPF 112
>gi|28193631|gb|AAO27295.1| timing of CAB expression 1-like protein [Brassica rapa subsp.
pekinensis]
Length = 104
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQP 525
REAAL KFR KRK+RCFDKK+RY +RK+LAE+RPR++GQFVR+V P
Sbjct: 49 REAALNKFRMKRKDRCFDKKVRYESRKKLAEQRPRIKGQFVRQVQSTETSTQEAP 103
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +RIL+ D+D++ + +L++ YQVT + L DL+L++V +P
Sbjct: 9 SGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPG 68
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G +L+ + + +PVIMMS + V+ + GA DYL+KP+R EL N+W H
Sbjct: 69 MNGYNLLQQVGLLE--MDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 151 MWRRR 155
+ RR+
Sbjct: 127 VVRRK 131
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S +RIL+ D+D++ + +L++ YQVT + L DL+L++V +P
Sbjct: 9 SGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPG 68
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G +L+ + + +PVIMMS + V+ + GA DYL+KP+R EL N+W H
Sbjct: 69 MNGYNLLQQVGLLE--MDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 151 MWRRR 155
+ RR+
Sbjct: 127 VVRRK 131
>gi|255079384|ref|XP_002503272.1| predicted protein [Micromonas sp. RCC299]
gi|226518538|gb|ACO64530.1| predicted protein [Micromonas sp. RCC299]
Length = 1040
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 8/77 (10%)
Query: 468 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSS 527
+RR A+ +F +KRKER F+KK+RY +RKRLAE RPRVRGQFVR G VD
Sbjct: 932 AERRAEAIARFLKKRKERNFEKKVRYASRKRLAEARPRVRGQFVRLKEGEEVD------- 984
Query: 528 VDYDEDEDEEEEMASRD 544
D+DE E EE++ + D
Sbjct: 985 -DHDEHEAEEKQGSGGD 1000
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 19/141 (13%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQ----------------VTSVRSPRQVIDALNAEG 76
+R+L D+D + LL +C YQ VT+ + L
Sbjct: 24 MRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYMNFVTTTNQAITALKMLRENK 83
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLV 136
++ DL++++V +P G K+L+ + + +L PVIM+S+ + +V++ + GA DYL+
Sbjct: 84 NNFDLVISDVSMPDMDGFKLLELVGLEMDL---PVIMLSSHSDQKLVMRGITHGACDYLL 140
Query: 137 KPLRTNELLNLWTHMWRRRRM 157
KP+R EL N+W H+ RR+++
Sbjct: 141 KPVRIEELKNIWQHVIRRKKI 161
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 59 VTSVRSPRQVIDALNAEGSDIDLILAEVDLPM-TKGLKMLKYITRDKELQRIPVIMMSAQ 117
VT + R ++ L+ D++L EV P G +L+Y D +L PV++ SA
Sbjct: 6 VTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDL---PVVVFSAD 62
Query: 118 DEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 155
D+ V+KC+ GA DYLVKPLR EL N+W H++RR+
Sbjct: 63 DDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRK 100
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ D+D + +L C Y+VT R + + L + + D+++ ++ +P
Sbjct: 35 LRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLREDKNKFDIVVIDLHMPDMD 94
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L+ + L PV+MMS+ D+ V+ K + GA DYL+KP+R L +W H+
Sbjct: 95 GFELLEIAEFEMGL---PVVMMSSDDDHEVIKKGVLHGACDYLIKPVRMEALKMIWQHVI 151
Query: 153 RRRR 156
R+++
Sbjct: 152 RKKK 155
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 13 SGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL 72
SG G S S D F + +R+L+ D+D + +L+ C Y R R
Sbjct: 12 SGTAAGGSNS--DPF--PANLRVLVVDDDPTCLMILERMLMTCLY-----REQRAHCLCF 62
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIP-------VIMMSAQDEVSVVVK 125
+ D+++++V +P G K+L+++ + +L I VI+MSA D SVV+K
Sbjct: 63 GRTKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADDSKSVVLK 122
Query: 126 CLRLGAADYLVKPLRTNELLNLWTHMWRRRR 156
+ GA DYL+KP+R L N+W H+ R++R
Sbjct: 123 GVTHGAVDYLIKPVRIEALKNIWQHVVRKKR 153
>gi|313483769|gb|ADR51713.1| pseudo-response regulator [Secale cereale]
Length = 407
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 352 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 399
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L+ DND S + +L KCSYQV + S R ++ L + D+++ +V
Sbjct: 18 LRVLVVDNDPTWSRILEKMLKKCSYQVATCGS-RDALNMLRGRKDEYDIVICDVTTSDMD 76
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++L++I + PVI SA S + K +R GA DYL+KP+R EL N+W H++
Sbjct: 77 GFRLLEHIGLKMD---CPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHVF 133
Query: 153 RRR 155
R+R
Sbjct: 134 RKR 136
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ ++ D+D+ + + + KC Y+V + ++ + ID+IL +V LP
Sbjct: 14 LWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNMD 73
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G + LK+I ++ + IPVI+MS S V K + GA DY KP N+ +W H+
Sbjct: 74 GYEFLKHINKEID---IPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHV- 129
Query: 153 RRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFS-----DDTDDKSRRSTNPEIG 205
M EK + DF AS DAN S D DD + P I
Sbjct: 130 ---AMKAWNEKKLQKKDFSEFASSVLDANLKDQKEISSNSKESDVDDCDAQPKKPRIA 184
>gi|430005578|emb|CCF21379.1| Putative Sensor histidine kinase with a GAF domain and multiple HAMP
and Response regulator receiver domains (modular protein)
[Rhizobium sp.]
Length = 2102
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + S +V + + + I +NA+ SDI L+L ++ +P G
Sbjct: 1984 VLLVDDDARNIFALSSVLERRSMKVLTATTGSEAIQIINAQ-SDISLVLMDIMMPGMDGY 2042
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I +D+ R+P+I ++A+ KCL GA+DYL KP+ T ELL+ +W H
Sbjct: 2043 ETMQVIRKDERHSRLPIIALTAKAMKGDREKCLEAGASDYLAKPVNTQELLSALRMWLH 2101
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 9 NKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQV 68
+K + G+G S F + S+ R+LL ++D N ++ +LL +TSV + +
Sbjct: 1812 HKPATSDGLGEVFSRLKSFSETSRKRLLLVEDDENERFSITALLGHSDIDITSVGTGSEA 1871
Query: 69 IDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLR 128
+ L E +D ++ ++ LP G ++L+ I+ D ++ +PV++ + +D L+
Sbjct: 1872 LQIL--ENEPVDCVVLDLSLPDMSGFEVLEKISEDVKMTDVPVVVFTGRDLSPAESARLQ 1929
Query: 129 LGAADYLVKPLRTNELLNLWTHMWRRRRMLGL--AEKNILSYDFDLVASDPSDANTNSTT 186
A +VK + + E L T ++ R + + A++++L L +SD A T
Sbjct: 1930 SMARSVVVKGVESPERLLDETSLFLHRVIADMPPAKQDMLE---KLHSSDVELA--GKTV 1984
Query: 187 LFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDA 237
L DD +R +S+ E S+ V TA T+G+ A++ I+A
Sbjct: 1985 LL---VDDDARNI----FALSSVLERRSMKVLTA-----TTGSEAIQIINA 2023
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 24 GDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
GD ID+ + R+L D+D + +LL +C Y VT+ + L + DL
Sbjct: 8 GDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDL 67
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P G K+L+ + + +L PVIM+SA + +V+K + GA YL+KP+R
Sbjct: 68 VISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGDPKLVMKGITHGACYYLLKPVRI 124
Query: 142 NELLNLWTHMWRRRR 156
EL +W H+ RR++
Sbjct: 125 EELKTIWQHVIRRKK 139
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 24 GDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
GD ID+ + R+L D+D + +LL +C Y VT+ + L + DL
Sbjct: 8 GDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDL 67
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P G K+L+ + + +L PVIM+SA + +V+K + GA YL+KP+R
Sbjct: 68 VISDVHMPDMDGFKLLELVGLEMDL---PVIMLSANGDPKLVMKGITHGACYYLLKPVRI 124
Query: 142 NELLNLWTHMWRRRR 156
EL +W H+ RR++
Sbjct: 125 EELKTIWQHVIRRKK 139
>gi|168809271|gb|ACA29392.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 320 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 366
>gi|388514235|gb|AFK45179.1| unknown [Medicago truncatula]
Length = 138
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
REAAL KFR KRKERC++KK+RY +RK+LAE+RPRV+GQFVR+ N
Sbjct: 84 REAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQPN 128
>gi|168809295|gb|ACA29404.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 320 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 366
>gi|168809305|gb|ACA29409.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809307|gb|ACA29410.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 320 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 366
>gi|168809301|gb|ACA29407.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809309|gb|ACA29411.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809311|gb|ACA29412.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 376
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 321 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 367
>gi|413956107|gb|AFW88756.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 603
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
N+ +REAAL KFR KRK+R F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 543 NRFLQREAALNKFRLKRKDRNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 590
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 114 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
MS D +S+V KCL GA D+LVKPLR NEL NLW H+WRR
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRR 41
>gi|218200318|gb|EEC82745.1| hypothetical protein OsI_27456 [Oryza sativa Indica Group]
Length = 224
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+ + + R AA+IKFRQKRKER F KK+RY +RKRLAE+RPRVRGQFVR+
Sbjct: 157 RFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQA 207
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+D++ D + LL + Y VT+V S +DA A +D L++++V +P G
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDA--ARLTDFSLVISDVRMPGKDG 67
Query: 94 LKMLKYITRDKELQ-RIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
+L+ R +EL VIM++A + V+CLR GAADYL+KP + +L+
Sbjct: 68 FWLLE---RVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERAL 124
Query: 153 RRRRM 157
RRR+
Sbjct: 125 GRRRL 129
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAE---GSDIDLIL 83
F + +L+ D D V +L +Y+V +V + +DAL G +DL++
Sbjct: 515 FKGHRDICVLVVDCDPTCLMIVSGMLRALTYEVLTVD---RAVDALAMTLEGGCGVDLVM 571
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
E+ +P GL +L I R +L PV++MSA V++K LR GA YLVKP+ +
Sbjct: 572 TELHMPDMYGLDLLDEIRRTSKL---PVVIMSADSNEDVMLKSLRRGAEYYLVKPVLMED 628
Query: 144 LLNLWTHMWRRRR 156
+ N W ++++RRR
Sbjct: 629 VTNFWQYVFKRRR 641
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D D S + +L +YQV +V + + ++DL++ E+ +P GL
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 95 KMLKYITRDKELQRIPVI------------MMSAQDEVSVVVKCLRLGAADYLVKPLRTN 142
++L I + +L PV+ +MSA E +++ L GA Y+ KP+
Sbjct: 83 QLLDEIQKTSKL---PVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMG 139
Query: 143 ELLNLWTHMWRRRR 156
+ NLW +++ RR
Sbjct: 140 SIKNLWQYVFLNRR 153
>gi|147772101|emb|CAN64552.1| hypothetical protein VITISV_007888 [Vitis vinifera]
Length = 519
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 28/80 (35%)
Query: 463 VKMNKVDRREAALIKFRQKRKERCFDKK----------------------------IRYV 494
V N+ +REAAL KFRQKRKERCF+KK +RY
Sbjct: 429 VDQNQYAQREAALNKFRQKRKERCFEKKPVNVLGFDGTLCIAHAHAHAHSCTTTQQVRYQ 488
Query: 495 NRKRLAERRPRVRGQFVRKV 514
+RKRLAE+RPR+RGQFVR+V
Sbjct: 489 SRKRLAEQRPRIRGQFVRRV 508
>gi|428221705|ref|YP_007105875.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 7502]
gi|427995045|gb|AFY73740.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 7502]
Length = 595
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI+ +L+ D++ N+ D L + Y VT+ + ++ + + + +L+L ++
Sbjct: 178 FIENQTCHLLVVDDNENNRDLFTRQLQREGYIVTTATNGQEALTMIKT--GEYELVLLDL 235
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+P+ G + LK + D++ Q IPVIM+SA DE+ VV+C+ +GA D+L KP
Sbjct: 236 MMPILDGYQALKMLKADEQWQHIPVIMISASDEIDQVVRCIEIGAEDFLPKPF 288
>gi|443327316|ref|ZP_21055944.1| serine phosphatase RsbU, regulator of sigma subunit [Xenococcus sp.
PCC 7305]
gi|442793108|gb|ELS02567.1| serine phosphatase RsbU, regulator of sigma subunit [Xenococcus sp.
PCC 7305]
Length = 592
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
++++ IL+ D+++ + D + ++ Y+V + +Q + + E D LIL +V +
Sbjct: 190 NKNRSTILIVDDNATNLDLLSRYIINQGYKVARAANGKQALAMIQIEKYD--LILLDVLM 247
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW 148
P G ++L++I ++ L IPVIM+SA DE+ VVKC+ +GA DYL KP +
Sbjct: 248 PGIDGYEVLQWI-KNSSLSYIPVIMISALDEIDSVVKCIEMGAEDYLSKP---------F 297
Query: 149 THMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPEIGMST 208
+ + R+ EK L +L + + AN TTL + +R +T E+
Sbjct: 298 NAVILKARISACLEKKQLRDQEELFLNQLAQANQEITTLNKLLKAENNRLTTEIEVTQRL 357
Query: 209 HQ 210
Q
Sbjct: 358 QQ 359
>gi|357010236|ref|ZP_09075235.1| DhkJ [Paenibacillus elgii B69]
Length = 1216
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D + A+ +LL QV + RQ +D+L+ E D DL+L ++ +P G
Sbjct: 1097 KVLLVDDDIRNVFALSNLLEGLGMQVAFAETGRQALDSLDRE-PDFDLVLMDIMMPEMDG 1155
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ I D+ R+P+I ++A+ KC++ GA+DY+ KP+ T +LL+L W +
Sbjct: 1156 YEAMRAIRGDERFDRLPIIALTAKAMKDDREKCIQAGASDYITKPVHTEQLLSLMRVWLY 1215
>gi|386847212|ref|YP_006265225.1| sensor histidine kinase [Actinoplanes sp. SE50/110]
gi|359834716|gb|AEV83157.1| sensor histidine kinase [Actinoplanes sp. SE50/110]
Length = 952
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 2 ESKEMNLNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTS 61
E E+ LN + AGI ++ G R K +LL D++ + V LL Y+VT+
Sbjct: 789 EEAELWLNGQDLPAGIQDAAPPAPGLPGR-KPAVLLVDDNPDMRAYVRRLL-SDRYEVTA 846
Query: 62 VRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVS 121
V RQ +DAL G DL+L++V +P GL +L I D + PVI+++A +
Sbjct: 847 VADGRQALDALVERG--FDLVLSDVMMPELDGLALLTQIRTDPRHRATPVILLTALADPG 904
Query: 122 VVVKCLRLGAADYLVKPLRTNELL 145
V L GA DY+VKP EL+
Sbjct: 905 STVAGLAAGAHDYIVKPFTARELI 928
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
D+I+++V +P G ++L+ + + +L PVIMMSA +V+K ++ GA DYL+KP
Sbjct: 9 FDVIISDVHMPDMNGFRLLELVGLEMDL---PVIMMSADSRTDLVMKGIKHGACDYLIKP 65
Query: 139 LRTNELLNLWTHMWRRR 155
+R EL N+W H+ R++
Sbjct: 66 VRMEELKNIWQHVVRKK 82
>gi|434386136|ref|YP_007096747.1| ATPase involved in chromosome partitioning [Chamaesiphon minutus
PCC 6605]
gi|428017126|gb|AFY93220.1| ATPase involved in chromosome partitioning [Chamaesiphon minutus
PCC 6605]
Length = 735
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D++ + D + L + Y VT+ + RQ + L A DLIL +V +P GL
Sbjct: 189 ILVVDDNPTNCDLLSRQLKRQGYTVTTATNARQALRLLKA--VPYDLILLDVIMPEVDGL 246
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
++L+ + +D Q IP I +SA + + V VKC+ LGA DYL KP
Sbjct: 247 ELLQQLKQDDRFQHIPAIAISALETIDVAVKCIELGAEDYLQKP 290
>gi|254380439|ref|ZP_04995805.1| PAS/PAC sensor hybrid histidine kinase [Streptomyces sp. Mg1]
gi|194339350|gb|EDX20316.1| PAS/PAC sensor hybrid histidine kinase [Streptomyces sp. Mg1]
Length = 1378
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V +L+ D++++ + + LL+ YQV++V RQ + A+ + DL++++V +P
Sbjct: 629 VHVLVADDNADMREYLIRLLLGAGYQVSAVDDGRQALGAIRTKA--FDLVVSDVMMPHLD 686
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
GL ++ + D +PV+++SA+ ++ L+ GA DYLVKP ELL
Sbjct: 687 GLALVAALRADPRTASVPVLLLSARAGQEASIEGLQAGADDYLVKPFAAAELL 739
>gi|418056989|ref|ZP_12695039.1| GAF sensor hybrid histidine kinase, partial [Hyphomicrobium
denitrificans 1NES1]
gi|353207525|gb|EHB72933.1| GAF sensor hybrid histidine kinase, partial [Hyphomicrobium
denitrificans 1NES1]
Length = 1103
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D+ + A+ SLL + V + + R+ I+ LN+ +D+ ++L ++ +P G
Sbjct: 985 KVLLVDDDARNIFALSSLLERRGMNVLTATTGREAIETLNS--TDVSIVLMDIMMPEMDG 1042
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I ++ QR+P+I ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 1043 YQTMQRIRGSEKHQRLPIIALTAKAMKGDREKCLEAGASDYLAKPVDTEQLLSALRMWLH 1102
>gi|418719447|ref|ZP_13278647.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. UI 09149]
gi|418738635|ref|ZP_13295028.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421092942|ref|ZP_15553670.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. 200801926]
gi|410364318|gb|EKP15343.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. 200801926]
gi|410744600|gb|EKQ93341.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. UI 09149]
gi|410745333|gb|EKQ98243.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456890147|gb|EMG00997.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. 200701203]
Length = 330
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VID LN + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIDWLNLKNQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P G ++L+ I KEL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|116328538|ref|YP_798258.1| diguanylate cyclase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331267|ref|YP_800985.1| diguanylate cyclase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116121282|gb|ABJ79325.1| GGDEF domain receiver component of a two- component response
regulator [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124956|gb|ABJ76227.1| GGDEF domain receiver component of a two- component response
regulator [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 330
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VID LN + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIDWLNLKNQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P G ++L+ I KEL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|168809253|gb|ACA29383.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809255|gb|ACA29384.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809257|gb|ACA29385.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809259|gb|ACA29386.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809261|gb|ACA29387.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809263|gb|ACA29388.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809265|gb|ACA29389.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809267|gb|ACA29390.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809269|gb|ACA29391.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809273|gb|ACA29393.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809275|gb|ACA29394.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809277|gb|ACA29395.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809279|gb|ACA29396.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809281|gb|ACA29397.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809283|gb|ACA29398.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809285|gb|ACA29399.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809287|gb|ACA29400.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809289|gb|ACA29401.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809291|gb|ACA29402.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809293|gb|ACA29403.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809297|gb|ACA29405.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809299|gb|ACA29406.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
gi|168809303|gb|ACA29408.1| pseudo-response regulator 7 [Hordeum vulgare subsp. vulgare]
Length = 375
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVR QFVR+
Sbjct: 320 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRWQFVRQ 366
>gi|94264235|ref|ZP_01288030.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|94266209|ref|ZP_01289918.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93453216|gb|EAT03674.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93455346|gb|EAT05550.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 403
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D + RIL+ D++ + D + L++ YQV +V +Q +D L G DL+L +V
Sbjct: 1 MDNQQPRILVVDDEEVNRDILVRRLIRRGYQVEAVADGQQALDWLA--GQPCDLVLLDVM 58
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+P+ GL L+ + RD +PVIM +A+D+ VV L GA+DY+ KP+
Sbjct: 59 MPVLDGLSALRRLRRDFSPTALPVIMTTARDDSEDVVTALEAGASDYVTKPI 110
>gi|159897134|ref|YP_001543381.1| guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
gi|159890173|gb|ABX03253.1| adenylate/guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
Length = 355
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+ ++ + L++ +Y V + +Q +D + + IDLIL ++ +P+ G
Sbjct: 7 RILVVDDSEDNRYLLQRQLLRRNYGVVLAENGQQALDYV--QSHTIDLILLDIMMPVMNG 64
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
++L+ + ++++L+ IPVI++SA D++ VVK +++GA DYL KP T L
Sbjct: 65 FEVLQNLKQNEQLRHIPVIIVSAADDMENVVKGIQMGAEDYLAKPFNTTLL 115
>gi|434400628|ref|YP_007134632.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
gi|428271725|gb|AFZ37666.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
Length = 573
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
++S+ +IL+ D++ + D + + YQV + + +QV++ + + + DLIL ++
Sbjct: 169 LTNQSEGKILVVDDNPTNRDLLSRQIKAQGYQVGTAANGQQVLELI--QTGEYDLILLDI 226
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+P G ++LK + RD + + IPVIM+SA D++ VVKC+ +GA DYL KP
Sbjct: 227 IMPEMDGYQVLKSL-RDSQWRYIPVIMISALDQIDSVVKCIEMGAEDYLAKPF 278
>gi|398336642|ref|ZP_10521347.1| diguanylate cyclase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 330
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSV-RSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T +SP +VI L+ + SD LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKDTKTSQSPDEVIGWLSLKSSDPPQKEFSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I +EL+ IPVIM++A E +V+ + GA DY+VKP NEL
Sbjct: 64 PGITGLEILKMIREKEELKDIPVIMITALKESNVLQEAFDTGAIDYVVKPFDANELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L +DS+ A+ + +++ S ++VT+V S ++ ++ L E ++ +I+ + +P G
Sbjct: 89 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTE-PNVSMIITDYCMPEMTGY 147
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
++LK + +L++IPV++MS+++ + + +CL GA D+LVKP+R +++ +++ + R
Sbjct: 148 ELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRVFSRVLR 206
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 18/149 (12%)
Query: 22 SSGDGFIDRSKV--RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI 79
S+ DG D+ V R+L D++ + LL++C Y VT R+ ++ L +
Sbjct: 5 STEDGRHDKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMF 64
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL++++V++P T G K+L+ I + +L PVI S D V+K + GA DYLVKP+
Sbjct: 65 DLVISDVEMPDTDGFKLLE-IGLEMDL---PVITHSDYDS---VMKGIIHGACDYLVKPV 117
Query: 140 RTNELLNLWTHMWRRRRMLGLAEKNILSY 168
EL N+W H + +KNI SY
Sbjct: 118 GLKELQNIWHH---------VVKKNIKSY 137
>gi|421749453|ref|ZP_16186889.1| multi-sensor hybrid histidine kinase, partial [Cupriavidus necator
HPC(L)]
gi|409771673|gb|EKN53898.1| multi-sensor hybrid histidine kinase, partial [Cupriavidus necator
HPC(L)]
Length = 431
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 21 KSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDID 80
+S D F R R+LL ++D+ + A+ ++ QV R+ RQ ++ L+ DID
Sbjct: 301 RSRDDAFEGR---RLLLVEDDARNIFALSKVIEPLGAQVEIARNGRQALEILDGR-DDID 356
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
L+L ++ +P GL +++I +D R+P+I ++A+ S CL GA DY+ KP+
Sbjct: 357 LVLMDIMMPEMDGLTAMRHIRQDGRHARLPIIALTAKAMSSDREACLLAGANDYIAKPID 416
Query: 141 TNELLNL---WTH 150
++LL+L W H
Sbjct: 417 IDKLLSLCRVWLH 429
>gi|390569999|ref|ZP_10250271.1| multi-sensor hybrid histidine kinase [Burkholderia terrae BS001]
gi|389937886|gb|EIM99742.1| multi-sensor hybrid histidine kinase [Burkholderia terrae BS001]
Length = 1162
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL ++D + A+ +L ++ R+ R+ ++ALN+ G ++DL+L ++ +P GL
Sbjct: 1043 ILLAEDDVRNIFALSHVLEPLGAKLEIARNGREALEALNS-GREVDLVLMDIMMPEMDGL 1101
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ +I RD+ +P++ ++A+ ++CL GA DY+ KP+ ++L++L +W R
Sbjct: 1102 TAIAHIRRDERFAHLPIVALTAKAMAQDRMRCLEAGADDYISKPIDVDKLISL-CRVWLR 1160
Query: 155 RR 156
+R
Sbjct: 1161 QR 1162
>gi|3831441|gb|AAC69924.1| hypothetical protein [Arabidopsis thaliana]
Length = 203
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 20/66 (30%)
Query: 470 RREAALIKFRQKRKERCFDKK--------------------IRYVNRKRLAERRPRVRGQ 509
+REAAL+KFR KRK+RCFDKK +RY +RK+LAE+RPRV+GQ
Sbjct: 131 QREAALMKFRLKRKDRCFDKKHLKQIQDQTDSMEMYKNGLQVRYQSRKKLAEQRPRVKGQ 190
Query: 510 FVRKVN 515
FVR VN
Sbjct: 191 FVRTVN 196
>gi|312196948|ref|YP_004017009.1| multi-sensor signal transduction histidine kinase [Frankia sp.
EuI1c]
gi|311228284|gb|ADP81139.1| multi-sensor signal transduction histidine kinase [Frankia sp.
EuI1c]
Length = 1389
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
DG RS VR+L+ D++++ + LL + V +V R +DAL AE DL+++
Sbjct: 624 DGGGARS-VRVLVADDNADMRGYLTRLLRGAGHTVVAVNDGRAALDALRAE--PFDLVVS 680
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+V +P GL+++ + D+ +PV+++SA+ V+ L GA DYLVKP +L
Sbjct: 681 DVMMPGLDGLELVAALRADRRTASVPVLLLSARAGEEASVQGLEAGADDYLVKPFAAADL 740
Query: 145 L 145
L
Sbjct: 741 L 741
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 58 QVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQ 117
+VT+ R + L + D+I+++V++P G ++L+++ + +L PVI++S
Sbjct: 54 RVTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDL---PVILISVD 110
Query: 118 DEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRR 155
E++ V+K ++ GA DYL+KP+R EL N+W H+ R++
Sbjct: 111 GEMNRVMKGIQSGACDYLLKPVRMEELKNIWQHVLRKK 148
>gi|443290988|ref|ZP_21030082.1| Two-component response regulator receiver sensor signal
transduction histidine kinase [Micromonospora lupini
str. Lupac 08]
gi|385885810|emb|CCH18189.1| Two-component response regulator receiver sensor signal
transduction histidine kinase [Micromonospora lupini
str. Lupac 08]
Length = 1001
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ RIL+ D++S+ + LL ++V SV RQ +DA+ E D L+L +V +P+
Sbjct: 625 AGARILVADDNSDMRAYLSRLLAGQGWRVRSVTDGRQALDAIRQEPPD--LVLTDVMMPV 682
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G +++ + D Q +PV+++SA+ V L LGA DYLVKP EL
Sbjct: 683 LDGFDLVRRLRADPATQALPVLVLSARAGEEASVVGLSLGADDYLVKPFAAAEL 736
>gi|85860826|ref|YP_463028.1| response regulator [Syntrophus aciditrophicus SB]
gi|85723917|gb|ABC78860.1| response regulator with sigma 54 interaction domain [Syntrophus
aciditrophicus SB]
Length = 502
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 26/266 (9%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D++ N + ++L K YQV + ++ L E ID+++ ++ +P G
Sbjct: 3 KVLIVDDELNMRVVLQAMLKKKGYQVAQAADGLEALECLEKE--QIDVVVTDLKMPKLSG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L +L+++T PVI+++A + V L+ GA DY+ KP +EL+++ R
Sbjct: 61 LGLLEHVTST--YPETPVIIITAHGTIETAVDALKKGAFDYITKPFDRDELISVIEKAIR 118
Query: 154 RRRM----LGLAEKNILSYDF--------DLVASDPSDANTNSTTLFSDDTDDKSRRSTN 201
R + LAE+ I Y ++ + A+T +T L + +T T
Sbjct: 119 TRIKNHGEVILAEEEIDKYGIVGCSEKIREIYKTIEKVASTKTTILITGET------GTG 172
Query: 202 PEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPGISDRRTAGPKKIELR 261
E + H P + G A I+A G + + +A P K EL
Sbjct: 173 KE--LIAHAIHRGSPRKDNAYIKINCGAIAKNLIEAELFGYEKGAFTGAASAKPGKFEL- 229
Query: 262 IGESSAFFTYVKSNMPRDSSPRIVNV 287
+ F +PRD +++ V
Sbjct: 230 -ADQGTIFLDEIGEIPRDMQVKLLQV 254
>gi|420248161|ref|ZP_14751526.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain, partial [Burkholderia sp. BT03]
gi|398069062|gb|EJL60440.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain, partial [Burkholderia sp. BT03]
Length = 492
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL ++D + A+ +L ++ R+ R+ ++ALN+ G ++DL+L ++ +P GL
Sbjct: 373 ILLAEDDVRNIFALSHVLEPLGAKLEIARNGREALEALNS-GREVDLVLMDIMMPEMDGL 431
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ +I RD+ +P++ ++A+ ++CL GA DY+ KP+ ++L++L +W R
Sbjct: 432 TAIAHIRRDERFAHLPIVALTAKAMAQDRMRCLEAGADDYISKPIDVDKLISL-CRVWLR 490
Query: 155 RR 156
+R
Sbjct: 491 QR 492
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
VRIL+ ++D V +L Y+VT+ + L + +I+LIL E LP
Sbjct: 23 VRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRILREKEDEINLILIETRLPDMN 82
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
++L+ + EL +P+++ SA + S ++ CL GAA YL+KP+ N++ NLW +
Sbjct: 83 QYEILETL---GELSSLPIVVFSADNNESAMLGCLYKGAALYLMKPIIKNDVKNLWQLTY 139
Query: 153 RRR 155
R +
Sbjct: 140 RTK 142
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ I++ D+D V +L Y+V +V S + + L + LI+ +V +P
Sbjct: 21 LHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEMD 80
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G + + + + L PV+MMSA D+ S +++ L GAA Y+VKP+ ++L NLW +
Sbjct: 81 GFEFQRLVHEEFHL---PVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 135
>gi|429330823|ref|ZP_19211601.1| multi-sensor hybrid histidine kinase [Pseudomonas putida CSV86]
gi|428764409|gb|EKX86546.1| multi-sensor hybrid histidine kinase [Pseudomonas putida CSV86]
Length = 1171
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILL D+D + A+ S L V R+ R+ I+ L +G DIDL+L +V +P G
Sbjct: 1047 RILLVDDDVRNIFALTSALEHKGALVEIARNGRESIERLEEQGGDIDLVLMDVMMPEMDG 1106
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
+ + I +D +++P+I ++A+ +CL+ GA DYL KP+ + L +L +W
Sbjct: 1107 FEATRLIRKDPRWRKLPIIAVTAKAMKDDQERCLQAGANDYLAKPIDLDRLFSL-IRVW 1164
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
SK IL+ +++ N + +F L + Y + D AE D IL ++ LP
Sbjct: 776 SKRCILVIEDEPNFARILFDLAHELGYNCLVAHAADDGFDL--AERFVPDAILLDMRLPD 833
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL +L+ + + IPV ++S +D + L +GA Y+VKP EL ++
Sbjct: 834 HSGLTVLQRLKEQAATRHIPVHVISVEDRIET---ALHMGAVGYVVKPTSREELKTVFAR 890
Query: 151 M 151
+
Sbjct: 891 L 891
>gi|29345934|ref|NP_809437.1| two-component system response regulator [Bacteroides
thetaiotaomicron VPI-5482]
gi|298387303|ref|ZP_06996856.1| two-component system response regulator [Bacteroides sp. 1_1_14]
gi|380695843|ref|ZP_09860702.1| two-component system response regulator [Bacteroides faecis MAJ27]
gi|383121413|ref|ZP_09942126.1| hypothetical protein BSIG_1093 [Bacteroides sp. 1_1_6]
gi|29337828|gb|AAO75631.1| putative two-component system response regulator [Bacteroides
thetaiotaomicron VPI-5482]
gi|251842740|gb|EES70820.1| hypothetical protein BSIG_1093 [Bacteroides sp. 1_1_6]
gi|298259972|gb|EFI02843.1| two-component system response regulator [Bacteroides sp. 1_1_14]
Length = 121
Score = 68.9 bits (167), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D + V S+ + Y V + +P + ID LN EG+ DLI++++ +P+
Sbjct: 2 KKKILLVD-DKATIGKVASIYLGKDYDVMYLENPIKAIDWLN-EGNVPDLIISDIRMPLM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+G + L+Y+ ++ + IP++M+S+++ + +K L GA DY++KP EL
Sbjct: 60 RGDEFLRYMKANELFKSIPIVMLSSEESTTERIKLLEEGAEDYILKPFNPLEL 112
>gi|392415503|ref|YP_006452108.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium chubuense
NBB4]
gi|390615279|gb|AFM16429.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium chubuense
NBB4]
Length = 1394
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ VR+L+ D++++ D + LL Y V +V +Q +DA+ A S D+++++V +P
Sbjct: 629 AAVRVLVADDNADMRDYLTRLLRSDGYAVEAVTDGQQALDAIRA--STPDMVISDVMMPR 686
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
GL ++ + D+ +PV+++SA+ + L+ GA DYLVKP ELL
Sbjct: 687 LDGLGLVAALRADRRTASVPVLLLSARAGQEASISGLQAGADDYLVKPFAAAELL 741
>gi|145514149|ref|XP_001442985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410346|emb|CAK75588.1| unnamed protein product [Paramecium tetraurelia]
Length = 838
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 47 AVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKEL 106
A+ LL C +QV + ++ + D L ++ DLIL ++ +P GL +LK I +L
Sbjct: 39 AIVDLLQLCGFQVIACKNGLEARDELLKGENEFDLILLDLLMPEMGGLDLLKIIKSIDKL 98
Query: 107 QRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
+ PVIMMS E +V CL GA +YLVKP+ + +L
Sbjct: 99 KETPVIMMSGDGETDIVAACLGAGALNYLVKPVNFKQFQSL 139
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
D KV IL+ D++ + + + L K Y++T V S + + L+ + + IDL+L +V +
Sbjct: 1194 DSEKVHILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVLDDDDT-IDLVLLDVMM 1252
Query: 89 PMTKGLKMLKYITRDKEL-QRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
P G ++ + I R+K L +PV+M++A+++VS +V L GA DY+ KP +E L
Sbjct: 1253 PRMSGYEVCQKI-REKHLPSELPVLMITAKNQVSDLVTGLNTGANDYIAKPFSKDEFL 1309
>gi|393787596|ref|ZP_10375728.1| hypothetical protein HMPREF1068_02008 [Bacteroides nordii
CL02T12C05]
gi|392658831|gb|EIY52461.1| hypothetical protein HMPREF1068_02008 [Bacteroides nordii
CL02T12C05]
Length = 146
Score = 68.6 bits (166), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 19 NSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
N S FI + +ILL D D S V S+ + Y T +P + I+ LN EG+
Sbjct: 14 NKASKVKSFIIDMRKKILLID-DKASIAKVVSIYLGKDYDFTYHENPIKAIEWLN-EGNV 71
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
DLI++++ +P G + L Y+ R++ + IP+IM+S+++ + ++ L GAADY++KP
Sbjct: 72 PDLIISDIRMPEMMGDEFLLYMKRNELFKSIPIIMLSSEESTTERIRLLEEGAADYILKP 131
Query: 139 LRTNEL 144
EL
Sbjct: 132 FNPLEL 137
>gi|456865184|gb|EMF83544.1| diguanylate cyclase (GGDEF) domain protein [Leptospira weilii
serovar Topaz str. LT2116]
Length = 330
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI+ LN + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVINWLNLKSQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P G ++L+ I KEL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|359727786|ref|ZP_09266482.1| GGDEF domain-containing protein [Leptospira weilii str. 2006001855]
gi|417779952|ref|ZP_12427728.1| diguanylate cyclase (GGDEF) domain protein [Leptospira weilii str.
2006001853]
gi|410779921|gb|EKR64524.1| diguanylate cyclase (GGDEF) domain protein [Leptospira weilii str.
2006001853]
Length = 330
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI+ LN + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVINWLNLKSQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P G ++L+ I KEL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQ--------VTSVRSPRQVIDALNAEGSDIDLIL 83
K+ IL+ D+DS S V + L SY+ V +V+ P + L + DL++
Sbjct: 16 KIHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDALSILRLKKGLFDLVV 75
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
+++ +P G+++ K + +E ++PVI+MS+ + +V+ + L GAA Y+VKP +
Sbjct: 76 SDLHMPEMNGMELQKQV---EEEFKLPVIIMSSDESKNVISRSLEGGAAFYIVKPANKVD 132
Query: 144 LLNLWTH 150
L N+W +
Sbjct: 133 LKNVWHY 139
>gi|421097719|ref|ZP_15558399.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. 200901122]
gi|410799269|gb|EKS01349.1| diguanylate cyclase (GGDEF) domain protein [Leptospira
borgpetersenii str. 200901122]
Length = 330
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI+ LN + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVINWLNLKNQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P G ++L+ I KEL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|434386132|ref|YP_007096743.1| histidine kinase,histidine kinase,Response regulator receiver
domain protein [Chamaesiphon minutus PCC 6605]
gi|428017122|gb|AFY93216.1| histidine kinase,histidine kinase,Response regulator receiver
domain protein [Chamaesiphon minutus PCC 6605]
Length = 530
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D++ + D + L + Y VT+ + RQ + L A DLIL + +P GL
Sbjct: 190 ILVVDDNPTNCDLLSRQLKRQGYTVTTATNARQALRLLKA--ISYDLILLDAIMPEIDGL 247
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
++L+ + +D + IP I++SA + + V VKC+ LGA DYL KP
Sbjct: 248 ELLQQLKQDDRFKHIPAIVISALETIDVAVKCIELGAEDYLQKP 291
>gi|255595850|ref|XP_002536403.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223519809|gb|EEF25981.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 233
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
VRILL ++D DA+ LV +Y V R+ ++ + A+ ++ D L+L ++ LP
Sbjct: 10 VRILLVEDDVVLGDALVQSLVNATYAVDWFRNGKEGVLAVQSQSYD--LVLLDLGLPFLN 67
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + +K + K Q +PVI+++A D +V+ LGA DYL+KP + EL
Sbjct: 68 GFEFIKRLRNGK--QAVPVIVLTANDNSEDIVRAFDLGADDYLIKPFKLPEL 117
>gi|443479083|ref|ZP_21068740.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
gi|443015498|gb|ELS30420.1| response regulator receiver protein [Pseudanabaena biceps PCC 7429]
Length = 240
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D++ + D + L + +Q++ + R+ I+ A+ + DL+L ++ +P G
Sbjct: 7 QVLIVDDNEINRDMLARRLHRRDFQISMAVNGREAIEM--AQKNLYDLVLLDIMMPELDG 64
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+L Y+ +D L+ IPVIM+SA +E+ V+KC+ +GA DYL KP
Sbjct: 65 YAVLTYLKKDSRLRDIPVIMISAIEEMGSVMKCMEIGADDYLTKPF 110
>gi|258404235|ref|YP_003196977.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
gi|257796462|gb|ACV67399.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfohalobium retbaense DSM 5692]
Length = 448
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K RILL D++ N+ + + L K Y+V + + R ++ L G D +++ ++ LP
Sbjct: 3 TKKRILLIDDEPNTLKVLSAFLTKEGYEVGTAKDGRSGLNHLQEGGWD--MLITDLKLPD 60
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL +L+ + ++PV+M++A +S V+ ++LGA +YL KP+ +ELL L +
Sbjct: 61 ITGLDILEQV--KATWPKLPVVMITAYGSISNAVQAMKLGAFNYLTKPVDPDELLLLVQN 118
Query: 151 MWRRRRML 158
++ R ++L
Sbjct: 119 VFERSQLL 126
>gi|398887112|ref|ZP_10641941.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM60]
gi|398185879|gb|EJM73266.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM60]
Length = 461
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL ++D +A+ L+ + T+V S + +DA+ AE +L+L++V++P
Sbjct: 3 IKVLLVEDDRALREALTDTLLLAGHDYTAVGSAEEALDAVGAEA--FNLVLSDVNMPGMD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
G ++L + R ++ Q +PV++M+A V V +R GAADYLVKP LL+L
Sbjct: 61 GHQLLGLL-RARQPQ-LPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDL 113
>gi|398880859|ref|ZP_10635879.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM67]
gi|398191141|gb|EJM78340.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM67]
Length = 461
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL ++D +A+ L+ + T+V S + +DA+ AE +L+L++V++P
Sbjct: 3 IKVLLVEDDRALREALTDTLLLAGHDYTAVGSAEEALDAVEAEA--FNLVLSDVNMPGMD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
G ++L + R ++ Q +PV++M+A V V +R GAADYLVKP LL+L
Sbjct: 61 GHQLLGLL-RARQPQ-LPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDL 113
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 6/127 (4%)
Query: 26 GFIDRSK-VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
G+ D K +++LL D DSNS+ + S L K Y V S + + + A++++ + +
Sbjct: 10 GWKDFPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIV 69
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV + G+ L+++ K+L P IM S +S ++KC+ LGA ++L KPL ++L
Sbjct: 70 EVSAGNSDGV--LRFLESAKDL---PTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKL 124
Query: 145 LNLWTHM 151
N+W H+
Sbjct: 125 KNIWQHV 131
>gi|357635437|ref|ZP_09133315.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
sp. FW1012B]
gi|357583991|gb|EHJ49324.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
sp. FW1012B]
Length = 519
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +IL+ ++D++ A+ L Y V R +D + AEG +L ++ LP
Sbjct: 5 KAKILVVEDDADVRQAIAFWLATAGYAVLEATDGRTGLDVIRAEGPQA--VLLDLRLPGL 62
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +L+ + R+ ++ PV+++S Q+E++ VV+ R+GAADYL KP+ + +LL
Sbjct: 63 DGFGVLEALGREGG-EQPPVLVISGQNEIAGVVQAFRMGAADYLQKPIVSFDLLG 116
>gi|182412958|ref|YP_001818024.1| GAF sensor hybrid histidine kinase [Opitutus terrae PB90-1]
gi|177840172|gb|ACB74424.1| GAF sensor hybrid histidine kinase [Opitutus terrae PB90-1]
Length = 1896
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+D+ + A+ ++L +V S + RQ I+ L + G +I +L ++ +P G
Sbjct: 1777 KILVVDDDARNIFALTTMLENYEMEVISAMNGRQAIELLQSHG-EIGAVLMDIMMPEMDG 1835
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I +D +P++ ++A+ KCL GA+DY+ KP+ TNELL+L +W
Sbjct: 1836 YETMREIRKDPRFSTLPILALTAKAMKGDRDKCLAAGASDYIAKPVNTNELLSL-LRVWL 1894
Query: 154 RR 155
R
Sbjct: 1895 YR 1896
Score = 38.9 bits (89), Expect = 7.8, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ ++++ D++ LL ++ + + + ++ L +D + ++ LP G
Sbjct: 1631 RLLIVEDNAIERDSIVQLLAHDDIEIVTAGTGAEALEQL--LDRPVDCCVLDLRLPDMSG 1688
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
++L + R+ L+ +PV++ + +D + L+ A LVK +++ E L T ++
Sbjct: 1689 FELLDRVQREPALREVPVVVFTGKDLSTEEEHRLKTVAKSVLVKDVQSPERLFDETALFL 1748
Query: 154 RRRMLGLAE 162
R + L E
Sbjct: 1749 HRVVADLPE 1757
>gi|429332277|ref|ZP_19213007.1| two component transcriptional regulator [Pseudomonas putida CSV86]
gi|428763108|gb|EKX85293.1| two component transcriptional regulator [Pseudomonas putida CSV86]
Length = 236
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL D+D + + + + L +C +QV +V + AL+AEGSD L++ +V LP G
Sbjct: 5 ILLVDDDQDIRELLDAYLSRCGFQVRAVADGQAFRQALDAEGSD--LVILDVMLPDEDGF 62
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ +++ R+P+IM++A + + V L LGA DYL KP EL + RR
Sbjct: 63 SLCRWVREHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRR 122
>gi|440797406|gb|ELR18493.1| multisensor hybrid histidine [Acanthamoeba castellanii str. Neff]
Length = 1015
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
SK ++LL D++ + + V LL Y+V SV + + + L A +DL+L +V +P
Sbjct: 79 SKPKVLLADDNFDMREYVARLLAP-KYEVISVSNGLEALSVLRAHSQAVDLVLTDVMMPF 137
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +LK I + + +PVIM+SA+ V+ L GA DYL KP ELL+
Sbjct: 138 LDGFGLLKEIRAKDQTRTLPVIMLSARAGEEASVEGLDEGADDYLTKPFTARELLS 193
>gi|410940007|ref|ZP_11371828.1| diguanylate cyclase (GGDEF) domain protein [Leptospira noguchii
str. 2006001870]
gi|410784870|gb|EKR73840.1| diguanylate cyclase (GGDEF) domain protein [Leptospira noguchii
str. 2006001870]
Length = 330
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIGWLNLKNQEPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I KEL+ IPVIM++A E V+ K GA DY+VKP EL
Sbjct: 64 PGITGLEILKLIREKKELKDIPVIMITALKESEVLQKAFDSGAIDYVVKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 48 VFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQ 107
V +L YQV +V++P + L + L++ +V +P G + K + + +L
Sbjct: 37 VAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEEFQL- 95
Query: 108 RIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR 156
PV+MMSA D+ S ++K L GAA Y+VKP+ ++L N+W + R+
Sbjct: 96 --PVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRK 142
>gi|386393409|ref|ZP_10078190.1| PAS domain S-box [Desulfovibrio sp. U5L]
gi|385734287|gb|EIG54485.1| PAS domain S-box [Desulfovibrio sp. U5L]
Length = 519
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +IL+ ++D++ A+ L Y V R +D + AEG +L ++ LP
Sbjct: 5 KAKILVVEDDADVRQAIAFWLATAGYAVLEATDGRTGLDVIRAEGPQA--VLLDLRLPGL 62
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +L+ + R+ ++ PV+++S Q+E++ VV+ R+GAADYL KP+ + +LL
Sbjct: 63 DGFAVLEALGREGG-EQPPVLVISGQNEIAGVVQAFRMGAADYLQKPIISFDLLG 116
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 12/158 (7%)
Query: 9 NKECSGAGIGNSKSSGD-----GFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVR 63
N S A + SSGD D ++L+ D+D + + LL + +QV +V
Sbjct: 61 NSSSSTANDTHRLSSGDLVNSITVEDEGAKKVLVVDDDRVARQVLTKLLEQLGFQVKAVE 120
Query: 64 SPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVV 123
+Q ++ L EG++ L+L +V +P GL++LK I R + +P+IM+S+ ++ +
Sbjct: 121 GGKQALEVLREEGNNYHLLLVDVLMPDMDGLQLLK-IFRQAYSEDMPIIMVSSSEDPDTI 179
Query: 124 VKCLRLGAADYLVKPLRTNELLNLWTHM-----WRRRR 156
+C + GA D+L KP++ E+L +M RRR+
Sbjct: 180 NQCFQSGAEDFLQKPVQL-EILKRRVNMCLEDRLRRRK 216
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQ------------------VTSVRSPRQVIDALNA 74
+R+L+ D+D + +L KCSY+ VT+ + L
Sbjct: 13 LRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQILRE 72
Query: 75 EGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVI----------MMSAQDEVSVVV 124
+ D+++++V++P G K+L+ I + +L PVI +MS E S V+
Sbjct: 73 RRNKFDIVISDVNMPDMDGFKLLELIGLEMDL---PVISTKLLQSVSTVMSIDGETSRVM 129
Query: 125 KCLRLGAADYLVKPLRTNELLNLWTHMWRRR 155
K + GA DYL+KP+R EL N+W H++R++
Sbjct: 130 KGVHHGACDYLLKPVRMKELRNIWQHVYRKK 160
>gi|291006740|ref|ZP_06564713.1| response regulator, two-component system [Saccharopolyspora
erythraea NRRL 2338]
Length = 220
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
VR+LL ++D +DA+ +L ++ T V DAL + DL+L ++ LP
Sbjct: 3 VRVLLVEDDDGVADALVDVLTAHGHRPTRVSRG---ADALTRH-REHDLVLLDLGLPDVD 58
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
GL++L+ + R EL PVI+++A+ E VV+ LR GA DYLVKP+R ELL
Sbjct: 59 GLEVLRKLRRVAEL---PVIVLTARGEERSVVRGLRSGADDYLVKPVRMAELL 108
>gi|386849595|ref|YP_006267608.1| response regulator receiver sensor signal transduction histidine
kinase [Actinoplanes sp. SE50/110]
gi|359837099|gb|AEV85540.1| response regulator receiver sensor signal transduction histidine
kinase [Actinoplanes sp. SE50/110]
Length = 1346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D + +L+ D++++ D + LL ++VT+V RQ +DA+ + D L++++V
Sbjct: 594 LDGATADVLVADDNADMRDYLTRLLRSAGHRVTAVGDGRQALDAIRTDAPD--LVVSDVM 651
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+P GL+++ + D +PV+++SA+ ++ L GA DYL KP ELL
Sbjct: 652 MPRMTGLELVTALRADNRTAGVPVLLLSARAGEEASIEGLEAGADDYLFKPFSAAELL 709
>gi|320355382|ref|YP_004196721.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfobulbus propionicus DSM 2032]
gi|320123884|gb|ADW19430.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfobulbus propionicus DSM 2032]
Length = 351
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+DS A+ +L+ ++VT+V S RQV++ +N E D+I+ ++++P G
Sbjct: 4 KILVADDDSLVRLAIQKILLFFDHEVTAVESGRQVLECVNDE---FDVIVLDINMPDMDG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ L+ + R + IPV+ ++ + VK + LGA D+L KP+ EL ++
Sbjct: 61 FETLERLNRQQ--VDIPVLFLTGAGSMDYAVKAIHLGAYDFLTKPIADIELFHVKVKQAV 118
Query: 154 RRRMLGLAEK 163
+R L EK
Sbjct: 119 EKRHFLLQEK 128
>gi|126432952|ref|YP_001068643.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium sp. JLS]
gi|126232752|gb|ABN96152.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium sp. JLS]
Length = 1390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 22 SSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
+ G G RIL+ D++++ + LL Y+VT+V RQ ++++ AE D L
Sbjct: 626 TGGSGTGTAVPARILIADDNADMRAYLTGLLRGAGYEVTAVSDGRQALESIRAELPD--L 683
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P GL+++ + + +PV+++SA+ ++ L GA DYLVKP
Sbjct: 684 VVSDVMMPGLDGLELVAALRAESRTAALPVLLLSARAGQESSIEGLHAGADDYLVKPFAA 743
Query: 142 NELL 145
ELL
Sbjct: 744 AELL 747
>gi|94500875|ref|ZP_01307401.1| diguanylate cyclase (GGDEF domain) [Bermanella marisrubri]
gi|94426994|gb|EAT11976.1| diguanylate cyclase (GGDEF domain) [Oceanobacter sp. RED65]
Length = 294
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
IL+ D+ +++ + S L Y V + Q +D L + DIDL+L +V++P G
Sbjct: 3 HILIVDDVASNLVLLGSHLEDQDYSVIEATNGPQALDLLQSH-DDIDLVLLDVEMPKMSG 61
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L++L+ I +D++++ +PVI+++A + VV L LGA DY++KP + LL R
Sbjct: 62 LEVLRKIKQDEQIKDLPVILVTANGDDQNVVDGLDLGAVDYVIKPYSLSVLLARVRSALR 121
Query: 154 RRRMLGLAEK 163
+ L L EK
Sbjct: 122 EKERLDLMEK 131
>gi|108797330|ref|YP_637527.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium sp. MCS]
gi|119866415|ref|YP_936367.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium sp. KMS]
gi|108767749|gb|ABG06471.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium sp. MCS]
gi|119692504|gb|ABL89577.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium sp. KMS]
Length = 1390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 22 SSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
+ G G RIL+ D++++ + LL Y+VT+V RQ ++++ AE D L
Sbjct: 626 TGGSGTGTAVPARILIADDNADMRAYLTGLLRGAGYEVTAVSDGRQALESIRAELPD--L 683
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++++V +P GL+++ + + +PV+++SA+ ++ L GA DYLVKP
Sbjct: 684 VVSDVMMPGLDGLELVAALRAESRTAALPVLLLSARAGQESSIEGLHAGADDYLVKPFAA 743
Query: 142 NELL 145
ELL
Sbjct: 744 AELL 747
>gi|347737126|ref|ZP_08869568.1| two component transcriptional regulator, winged helix family
[Azospirillum amazonense Y2]
gi|346919211|gb|EGY00840.1| two component transcriptional regulator, winged helix family
[Azospirillum amazonense Y2]
Length = 241
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S RILL ++D + +L + ++ T VR R++ DAL +GS DL+L +V LP
Sbjct: 5 SIARILLVEDDPAMRTLILRVLKENGFEATGVRDGREMADAL-GQGS-FDLVLLDVMLPG 62
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL + + + R + +P+IM+SA E +V L +GA DY+ KP R ELL
Sbjct: 63 QSGLDICRDLRRASQ---VPIIMVSAHGEEIDMVLGLEMGADDYVPKPFRAKELLARIRA 119
Query: 151 MWRR 154
+ RR
Sbjct: 120 LLRR 123
>gi|300022887|ref|YP_003755498.1| GAF sensor hybrid histidine kinase [Hyphomicrobium denitrificans ATCC
51888]
gi|299524708|gb|ADJ23177.1| GAF sensor hybrid histidine kinase [Hyphomicrobium denitrificans ATCC
51888]
Length = 1897
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D+ + A+ SLL + V + + + I+ LN+ +D+ ++L ++ +P G
Sbjct: 1779 KVLLVDDDARNIFALSSLLERRGMNVLTATTGLEAIETLNS--TDVSIVLMDIMMPEMDG 1836
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + QR+P+I ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 1837 YQTMQRIRGSDKHQRLPIIALTAKAMKGDREKCLEAGASDYLAKPVDTEQLLSALRMWLH 1896
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D+ S V +LL + Y+VT+V S ++ ++ L +E ++ +I+ + +P G
Sbjct: 30 VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILGSE-PNVSMIITDYWMPEMTGY 88
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+LK + +L+RIPV++MS+++ + + +CL GA D+L+KP+R +++ + T M
Sbjct: 89 DLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRM 145
>gi|153811647|ref|ZP_01964315.1| hypothetical protein RUMOBE_02039 [Ruminococcus obeum ATCC 29174]
gi|149832388|gb|EDM87473.1| diguanylate cyclase (GGDEF) domain protein [Ruminococcus obeum ATCC
29174]
Length = 711
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K RIL+ D DS + A+ S ++ Y + S ID L +I L+L ++ +P
Sbjct: 305 KYRILIVD-DSEMNRAILSEILSEEYDIVEADSGESCIDKLRQYEREISLVLLDIVMPGM 363
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL-------RTNEL 144
G +L Y+ R L+ IPVIM+S++D VV + +G +DY+ +P R
Sbjct: 364 DGFGVLNYMNRHHYLEDIPVIMISSEDSTEVVRRAYEMGVSDYINRPFDAGVVHRRVYNT 423
Query: 145 LNLWTHMWRRRRMLGL 160
+ L+ ++RR++ L
Sbjct: 424 IKLYA---KQRRLITL 436
>gi|428308146|ref|YP_007144971.1| CheA signal transduction histidine kinase [Crinalium epipsammum PCC
9333]
gi|428249681|gb|AFZ15461.1| CheA signal transduction histidine kinase [Crinalium epipsammum PCC
9333]
Length = 1213
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Query: 34 RILLCDNDSNSSDAVFSL-LVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +L +DS S +L L K Y + + ++ ++ L + SDI L++ ++++P
Sbjct: 1094 KTVLVVDDSLSHRQTLTLHLQKAGYHILQAQDGQEALEQLR-KSSDISLVICDIEMPRMN 1152
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G + L + T+D EL +IPV+M+++++ + L LGA+ YL KP ELLN T++
Sbjct: 1153 GFEFLNHRTQDPELNKIPVMMLTSRNSEKHRLLALELGASAYLTKPYLQQELLNTITNLM 1212
Query: 153 R 153
+
Sbjct: 1213 K 1213
>gi|427713660|ref|YP_007062284.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
gi|427377789|gb|AFY61741.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 6312]
Length = 600
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 32 KVRILLCDNDSNSSDAVFS-LLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
K ++L +D ++ +FS L + Y+V + Q ++ L+ D LIL + +P
Sbjct: 189 KFGVILVVDDVENNRVLFSRQLQRQGYEVDTAVDGYQALEKLSHRAYD--LILLDYMMPE 246
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G ++L + D++L+ IPVIM+SA DE+ V++C+ +GA DYL KPL + L
Sbjct: 247 LNGFQVLSRLKSDQKLRHIPVIMISANDEIDQVIRCIEIGAEDYLPKPLNSTLL 300
>gi|413956106|gb|AFW88755.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 574
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 114 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
MS D +S+V KCL GA D+LVKPLR NEL NLW H+WRR
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRR 41
>gi|395764338|ref|ZP_10445007.1| two-component system response regulator [Janthinobacterium lividum
PAMC 25724]
Length = 239
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI-DLILAEVDLPMT 91
+RIL+ +++ + D + L + + V+ R+ R D L+ G++ DLI+ +V LP+
Sbjct: 1 MRILVIEDEPKTGDYLLRGLAESGFTVSLARNGR---DGLHMAGTEAPDLIVLDVMLPIM 57
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G ++L+ + + +PVI ++A+DEV VK L LGA DYLVKP EL+ +
Sbjct: 58 DGWQVLRALRLQEGGADVPVIFLTARDEVQDRVKGLELGADDYLVKPFAFAELVARIRTL 117
Query: 152 WRR 154
RR
Sbjct: 118 LRR 120
>gi|146342589|ref|YP_001207637.1| sensor histidine kinase [Bradyrhizobium sp. ORS 278]
gi|146195395|emb|CAL79420.1| putative sensor histidine kinase with multiple PAS/PAC and a
response regulator receiver domain [Bradyrhizobium sp.
ORS 278]
Length = 1231
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
+ RILL D++++ D V LLV Y V +V + ++A+ + DL+L++V +P
Sbjct: 640 RARILLADDNADMRDYVRRLLV-TRYDVEAVADGKAALEAIAR--AKPDLVLSDVMMPQL 696
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G+++L + D + +PVI++SA+ V+ ++ GA DYL+KP ELL
Sbjct: 697 DGMQLLARVRADAQFSTVPVILLSARAGEESRVEGMQAGADDYLIKPFSARELL 750
>gi|255281457|ref|ZP_05346012.1| DNA-binding response regulator RegX3 [Bryantella formatexigens DSM
14469]
gi|255267945|gb|EET61150.1| hypothetical protein BRYFOR_06795 [Marvinbryantia formatexigens DSM
14469]
Length = 232
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILL ++D+N D + L K ++V +VRS + L A+ DL+L +V LP G
Sbjct: 3 RILLLEDDANLIDGLQYSLKKNGFEVDTVRSVHAAMQRL-ADMGKYDLLLLDVTLPDGSG 61
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
++ Y+ R+K RIP+I ++A DE +++ L LG DY+ KP + EL + + R
Sbjct: 62 FEVCGYV-REKN-PRIPIIFLTAADEEVNIIRGLDLGGDDYITKPFKLGELCSRIRALLR 119
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFS 189
R G+AE S D LV D + S L
Sbjct: 120 RA---GIAES---SGDTALVCGDITVDLLGSRVLLG 149
>gi|28209933|ref|NP_780877.1| transcriptional regulatory protein [Clostridium tetani E88]
gi|28202368|gb|AAO34814.1| transcriptional regulatory protein [Clostridium tetani E88]
Length = 238
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
FI S + IL+ ++D++ ++ + ++L K Y+VTS S + + E D LIL ++
Sbjct: 4 FIMNSNINILVVEDDTDINNLLCTMLNKQGYKVTSAYSGSEA--KMCLEKQDFQLILLDL 61
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G + I+ ++ + +P+I++SA+ + +K L+LGA D++ KP TNE+L
Sbjct: 62 MIPAISGENL---ISEIRKFKTMPIIVISAKPGQDIKIKVLKLGADDFICKPFDTNEVLA 118
Query: 147 LWTHMWRRRRMLGL--AEKNILSY 168
RR + EKNIL+Y
Sbjct: 119 RVESQLRRYTVFSSKNKEKNILTY 142
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 48 VFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQ 107
V +L YQV +V++P + L + L++ +V +P G + K + + +L
Sbjct: 37 VAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEEFQL- 95
Query: 108 RIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR 156
PV+MMSA D+ S ++K L GAA Y+VKP+ ++L N+W + R+
Sbjct: 96 --PVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRK 142
>gi|255586039|ref|XP_002533687.1| zinc finger protein, putative [Ricinus communis]
gi|223526413|gb|EEF28695.1| zinc finger protein, putative [Ricinus communis]
Length = 388
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 12/106 (11%)
Query: 432 SFPY-YPINMCLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKK 490
S+P+ +N C P S P GNS + +M ++R EA ++++R+KRK R F+K
Sbjct: 282 SYPFGRNMNTCTDP------SGPISGNSTNQAAQMCGINR-EARVLRYREKRKNRKFEKT 334
Query: 491 IRYVNRKRLAERRPRVRGQFVRKVNGVNVDLN---GQPSSVDYDED 533
IRY +RK AE RPR++G+F ++ ++ D++ PSSV Y D
Sbjct: 335 IRYASRKAYAETRPRIKGRFAKRTE-IDTDMDRLYNSPSSVSYLGD 379
>gi|413956108|gb|AFW88757.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 587
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 114 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
MS D +S+V KCL GA D+LVKPLR NEL NLW H+WRR
Sbjct: 1 MSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWRR 41
>gi|302342659|ref|YP_003807188.1| response regulator receiver modulated serine phosphatase
[Desulfarculus baarsii DSM 2075]
gi|301639272|gb|ADK84594.1| response regulator receiver modulated serine phosphatase
[Desulfarculus baarsii DSM 2075]
Length = 394
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+ + + + ++++K Y+V + + R I+AL A DIDLI+ ++ +P+ G
Sbjct: 17 KILIVDDSKLTREMLRAVMLKFGYKVVTAQHGRAAIEALTA-APDIDLIILDLVMPVMNG 75
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL-----LNLW 148
+ L++ E+ IPVI+ S+ D+ + L + + DY KPL ++ L +
Sbjct: 76 FEFLQWRAERPEVNLIPVIVSSSLDDFDAITIALSMNSYDYFTKPLTERDMEVTLPLKIT 135
Query: 149 THMWRRRRMLGLAEKN-ILSYDFDLVA 174
+ RR ML +N +L+Y+ ++ A
Sbjct: 136 NAVATRRLMLQTRRQNELLNYELEMAA 162
>gi|389815740|ref|ZP_10206995.1| two-component response regulator [Planococcus antarcticus DSM
14505]
gi|388465707|gb|EIM08022.1| two-component response regulator [Planococcus antarcticus DSM
14505]
Length = 225
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D++ D V L Y T S +Q +D LN E DL+L ++ +P G
Sbjct: 6 KVLLVDDEKRMLDLVALYLRPHDYACTKASSGKQALDLLNKEA--FDLVLLDIMMPDIDG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++ + I ++ IPVIM++A+++ +VK LRLGA DY+ KP ELL
Sbjct: 64 WEVCREI---RKFSTIPVIMLTAREQQEDIVKGLRLGADDYMTKPFGEEELL 112
>gi|373458095|ref|ZP_09549862.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
gi|371719759|gb|EHO41530.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
Length = 453
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K RIL+ D++ ++ D + + K Y + + + I+ + + D+ IL ++ +P
Sbjct: 2 KARILIVDDERDALDLMREVFEKKGYTPVTALNGLEAINIIKQQEPDV--ILTDIRMPEM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G+++L+ +T+D IPVIM++A + V +++GA DY++KP+R NE+L
Sbjct: 60 DGMELLRVLTKD--YPHIPVIMVTAHGTIETAVDAMKMGAKDYILKPIRINEIL 111
>gi|366090085|ref|ZP_09456451.1| chemotaxis response regulator protein-glutamate methylesterase
[Lactobacillus acidipiscis KCTC 13900]
Length = 335
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 8/119 (6%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ---VIDALNAEGSDIDLILAEVDLPM 90
RIL+ D+ + + +L K V++VR R +D L+A+ +D DLIL ++++P+
Sbjct: 3 RILMVDDSAFMRKVISDILNKMP-SVSTVRIARNGQNCLDILDAD-NDFDLILMDIEMPV 60
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
GL L+ I +D IPVIM+SA + +V +K L GAAD++ KP+ E+ + W
Sbjct: 61 MDGLSALRQIKKDYS---IPVIMLSAVSDQAVTIKALEYGAADFIEKPVNLMEIQDEWV 116
>gi|398333587|ref|ZP_10518292.1| diguanylate cyclase [Leptospira alexanderi serovar Manhao 3 str. L
60]
Length = 330
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI+ LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVINWLNLKSQAPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P G ++L+ I KEL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGVTGFEILELIREKKELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDATELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|171914206|ref|ZP_02929676.1| Putative Sensor histidine kinase with a GAF domain and multiple HAMP
and Response regulator receiver domains (modular protein)
[Verrucomicrobium spinosum DSM 4136]
Length = 2178
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D+ + A+ LL +V SV + RQ + + E D+ ++L ++ +P G
Sbjct: 2059 KVLVVDDDARNIFALSILLENHDMEVLSVTNGRQAVKLIE-ENPDLSMVLMDIMMPEMDG 2117
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ I ++ E + +P+I ++A+ KCL GA+DY+ KP+ T +LL+L W H
Sbjct: 2118 YQTMREIRKNPEFRTLPIIALTAKAMKGDREKCLEAGASDYIAKPVNTEQLLSLLRVWLH 2177
>gi|95930018|ref|ZP_01312758.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfuromonas acetoxidans DSM 684]
gi|95133987|gb|EAT15646.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfuromonas acetoxidans DSM 684]
Length = 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
IL+ D++ N + LL + VT +P +D L+ G IDLI++++ +P G
Sbjct: 3 HILIVDDEKNYRIVLGQLLESVGHHVTRADNPYAALDILS--GEQIDLIISDLKMPRMSG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ L+++ + E+ +P IM++A V ++ +++GA DYL+KP E+L
Sbjct: 61 IDFLRHV--NDEIGPVPFIMLTAYATVQTALQAMKIGAFDYLLKPFDNEEML 110
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D+ S + +LL + Y+VT+V S ++ ++ L++E ++ +I+ + +P G
Sbjct: 55 VMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEILDSE-PNVSMIITDYWMPEMTGY 113
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+LK + EL++IPV++MS+++ + + +CL GA ++L+KP+R +++ + T M
Sbjct: 114 DLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEFLLKPVRPSDISRISTRM 170
>gi|452819802|gb|EME26854.1| transcription factor [Galdieria sulphuraria]
Length = 307
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 513
K +RR AL +FRQKR RC+ KKIRY RKRLA+ RPR+RG+FV+K
Sbjct: 242 KTERRRIALERFRQKRSNRCYQKKIRYECRKRLADVRPRIRGRFVKK 288
>gi|407276862|ref|ZP_11105332.1| response regulator [Rhodococcus sp. P14]
Length = 793
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL +++++ D + LL + V + ++ + AE D L+L +V LP GL
Sbjct: 592 ILLVEDNADMRDHLLGLLTAQGWHVDATADAESALERIRAELPD--LLLTDVMLPGRSGL 649
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+L+ + D+ L R+PVI+++A+ V+ LR GA DY+VKP +EL
Sbjct: 650 SLLQDVRDDERLARLPVILLTARAGSESAVEGLRAGADDYVVKPFHPSEL 699
>gi|338739446|ref|YP_004676408.1| hypothetical protein HYPMC_2623 [Hyphomicrobium sp. MC1]
gi|337760009|emb|CCB65840.1| protein of unknown function [Hyphomicrobium sp. MC1]
Length = 1899
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D+ + A+ SLL + +V + + + I+ L+ +D+ ++L ++ +P G
Sbjct: 1781 KVLLVDDDARNIFALSSLLERRGMEVLTATTGLEAIETLST--TDVSIVLMDIMMPEMDG 1838
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I ++ QR+P+I ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 1839 YQTMQKIRSSEKNQRLPIIALTAKAMKGDREKCLEAGASDYLAKPVDTEQLLSALRMWLH 1898
>gi|333907190|ref|YP_004480776.1| two component, sigma54 specific, Fis family transcriptional
regulator [Marinomonas posidonica IVIA-Po-181]
gi|333477196|gb|AEF53857.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas posidonica IVIA-Po-181]
Length = 449
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S V++L+ ++D ++A+ L+ SYQ V S + + AL + D+++++V+LP
Sbjct: 2 SDVKLLIVEDDKGLAEALEDTLMLASYQCKMVYSAEEAVIAL--KHGQFDMVVSDVNLPG 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +L ++ +P+++M+A +++ V+ +R GA DYL+KP + ELLN
Sbjct: 60 MDGYGLLHHVV--DAYPELPIMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLN 113
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 33/232 (14%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS------------- 77
S+ +L D+ + LL SYQVT+V S + ++ L +
Sbjct: 8 SRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEI 67
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D++LI+ + +P G +LK + L+ IPV++MS+++ + + +CL+ GA ++ +K
Sbjct: 68 DVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLK 127
Query: 138 PLRTNELLNLWTHMWRRR----------RMLGLAEKNIL------SYDFDLVASDPSDAN 181
P++ ++ L +H+ +R+ + + L + L ++D + A++P A
Sbjct: 128 PVKLADMKKLKSHLLKRKQPKEAQAQQGQAVELEPEQQLDPRTQPAHDAEETAAEPPPAA 187
Query: 182 TNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVE 233
+N T D +K + + E GM + +T +A+TS + AVE
Sbjct: 188 SNGTA----DGGNKRKAAAMEEEGMLAVMTVAAPESSTKPRLATTSSSLAVE 235
>gi|220926141|ref|YP_002501443.1| GAF sensor hybrid histidine kinase [Methylobacterium nodulans ORS
2060]
gi|219950748|gb|ACL61140.1| GAF sensor hybrid histidine kinase [Methylobacterium nodulans ORS
2060]
Length = 1839
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + R+ I + E SDI ++L ++ +P G
Sbjct: 1721 VLLVDDDARNIFALSSVLERRGMRVLTATTGREAISIIE-ERSDIAIVLMDIMMPEMDGY 1779
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ LW H
Sbjct: 1780 ETMQVIRANPAFRRLPIVALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRLWLH 1838
>gi|440792571|gb|ELR13780.1| multisensor hybrid histidine kinase [Acanthamoeba castellanii str.
Neff]
Length = 1758
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K RILL D++ + D V LL YQV + +V+ L + + D++L +V +P
Sbjct: 919 KARILLADDNLDMRDYVARLLCP-KYQVICASNGIEVLSMLESS-KEFDMVLTDVMMPYL 976
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +LK I KE +PVIM SA+ + + L GA DYL+KP ELL
Sbjct: 977 DGFGLLKEIRSQKEYCTMPVIMFSARAGKETIAEGLAEGADDYLIKPFTARELLT 1031
>gi|301061392|ref|ZP_07202164.1| response regulator receiver domain protein [delta proteobacterium
NaphS2]
gi|300444516|gb|EFK08509.1| response regulator receiver domain protein [delta proteobacterium
NaphS2]
Length = 229
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K RIL+ D++ + + V L K Y+V S + + ++ E D LI+ ++ LP
Sbjct: 2 AKERILVVDDEEDILELVNFNLAKEGYRVISTTTGERAVEMSRVERPD--LIVLDLMLPG 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
GL++ K++ +++E Q IP++M++A+ E S VV L LGA DY+ KP LL
Sbjct: 60 MDGLEVAKFLKKNQETQNIPIVMLTAKGEESDVVTGLELGADDYVTKPFSPKILLARIRA 119
Query: 151 MWRRR 155
+ RR+
Sbjct: 120 VLRRK 124
>gi|412986140|emb|CCO17340.1| Sigma factor sigB regulation protein rsbU [Bathycoccus prasinos]
Length = 1051
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 468 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
DRR A+ +F +KR+ER F+KK+RY +R++LAE RPRVRGQFV+
Sbjct: 872 ADRRAQAIARFLKKRRERKFEKKVRYESRQKLAESRPRVRGQFVK 916
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKC-SYQVTSVRSPRQVIDALNAEGS-DIDLI 82
+G + K+ ++L ++D + V S+L++ + +V + S ++ ++ L+ + DIDLI
Sbjct: 119 EGGQKKEKLSVMLIEDDVPTLLEVQSMLLRAGATEVHTASSGKKALEFLDRDSKKDIDLI 178
Query: 83 LAEVDLPMTKGLKMLKYITRDKELQRIPVIMMS 115
A++ +P K ++ + + ++++L+ +PVI+MS
Sbjct: 179 FADIMMPEVKIDEVKRVLKKNEKLKEVPVIVMS 211
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V IL+ D DS V +L Y+V + + + L ++DLIL EV LP
Sbjct: 19 VSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPDMD 78
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
++L+ + E+ +P++++SA D+ + ++ CL GA YL+KP+ N++ +LW
Sbjct: 79 KYELLETMA---EVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSC 135
Query: 153 RRRRMLGLAEKNILSY 168
+ R +A + SY
Sbjct: 136 VKNRKNNVATEGSHSY 151
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+D+ D + LL + Y T+V S +D A +D L++++V +P G
Sbjct: 10 RILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMPARDG 67
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+L+ + VIM++A + V+CLR GAADYL+KP + EL+
Sbjct: 68 FWLLEQMREAS--PDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERALG 125
Query: 154 RRRM 157
RRR+
Sbjct: 126 RRRL 129
>gi|417770013|ref|ZP_12417926.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418682103|ref|ZP_13243323.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418704470|ref|ZP_13265343.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418711969|ref|ZP_13272717.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. UI 08452]
gi|421118481|ref|ZP_15578819.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|400326113|gb|EJO78382.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|409948030|gb|EKN98021.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pomona str. Pomona]
gi|410009967|gb|EKO68120.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410765866|gb|EKR36560.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410791548|gb|EKR85221.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. UI 08452]
gi|455668757|gb|EMF33947.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 330
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTFTSQSPEEVIGWLNLKNQEPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I +EL+ IPVIM++A E V+ K GA DY+VKP EL
Sbjct: 64 PGITGLEILKLIREKEELKDIPVIMITALKESDVLQKAFDSGAIDYVVKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|418703901|ref|ZP_13264783.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410766385|gb|EKR37070.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
Length = 330
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTFTSQSPEEVIGWLNLKNQEPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I +EL+ IPVIM++A E V+ K GA DY+VKP EL
Sbjct: 64 PGITGLEILKLIREKEELKDIPVIMITALKESDVLQKAFDSGAIDYVVKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|328951840|ref|YP_004369174.1| adenylate/guanylate cyclase [Desulfobacca acetoxidans DSM 11109]
gi|328452164|gb|AEB07993.1| adenylate/guanylate cyclase [Desulfobacca acetoxidans DSM 11109]
Length = 357
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D++ + + L K +Q + RQ + A+ AE D DLIL ++++P G
Sbjct: 17 ILVVDDNRMNRLMLARGLEKQGHQAAFAENGRQAL-AMLAE-QDFDLILLDIEMPEMNGY 74
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L ++ + + +PVIM+SA DE+ VV+C+ LGA DYL KP
Sbjct: 75 QVLDHLAANVRWRDLPVIMISAVDEIDSVVRCIELGAEDYLTKPF 119
>gi|410453194|ref|ZP_11307154.1| GAF sensor hybrid histidine kinase [Bacillus bataviensis LMG 21833]
gi|409933542|gb|EKN70466.1| GAF sensor hybrid histidine kinase [Bacillus bataviensis LMG 21833]
Length = 918
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+D + A+ L K V + R+ ID L+ E DIDLIL ++ +P G
Sbjct: 796 KILIVDDDIRNVYALTIALEKYEMNVLVADNGREGIDVLH-ENPDIDLILMDIMMPEMDG 854
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I + + +P+I ++A+ +CL GA DY+ KPL ++L +L H+W
Sbjct: 855 FEAIRKIRSNHKFTALPIIALTAKAMKQAREECLEAGATDYISKPLNIDQLFSLM-HVWL 913
Query: 154 RRR 156
R+
Sbjct: 914 YRK 916
>gi|186683187|ref|YP_001866383.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
gi|186465639|gb|ACC81440.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
Length = 1416
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+ S RILL D++S+ D V LL + Y+V SV +D +A G DL+L +V
Sbjct: 638 LSSSSARILLADDNSDMRDYVKRLLSQ-QYEVESVADGLAALD--SARGRVPDLVLTDVM 694
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+P G +L+ + + + +++P+I++SA+ V+ L GA DYL+KP ELL
Sbjct: 695 MPGLDGFGLLQELRANPQTKKVPIILLSARAGEEARVEGLEAGADDYLIKPFSARELL 752
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+D+ D + LL + Y T+V S +D A +D L++++V +P G
Sbjct: 10 RILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMPARDG 67
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+L+ + VIM++A + V+CLR GAADYL+KP + EL+
Sbjct: 68 FWLLEQMREAS--PDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERALG 125
Query: 154 RRRM 157
RRR+
Sbjct: 126 RRRL 129
>gi|170743275|ref|YP_001771930.1| GAF sensor hybrid histidine kinase [Methylobacterium sp. 4-46]
gi|168197549|gb|ACA19496.1| GAF sensor hybrid histidine kinase [Methylobacterium sp. 4-46]
Length = 1857
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + R+ I + A +DI ++L ++ +P G
Sbjct: 1739 VLLVDDDARNIFALSSVLERRGMRVLTATTGREAISIIEAR-ADIAIVLMDIMMPEMDGY 1797
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ LW H
Sbjct: 1798 ETMQVIRANPAFRRLPIVALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRLWLH 1856
>gi|219667295|ref|YP_002457730.1| transcriptional regulator [Desulfitobacterium hafniense DCB-2]
gi|219537555|gb|ACL19294.1| two component transcriptional regulator, winged helix family
[Desulfitobacterium hafniense DCB-2]
Length = 234
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V+ILL ++D+ + V L + Y V + ++ LN E D L+L +V LP
Sbjct: 2 VKILLVEDDAVIQELVTYNLEREGYTVMIAEEGNKALELLNKEKPD--LVLLDVMLPELD 59
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
GL + K I ++E IP+IM+SA+DEV+ V L LGA DY+ KP ELL
Sbjct: 60 GLDVCKKIRGNQETANIPLIMLSARDEVADRVIGLELGADDYITKPFSPRELL 112
>gi|418688098|ref|ZP_13249255.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742603|ref|ZP_13298973.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|410737522|gb|EKQ82263.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410749978|gb|EKR06961.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 330
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSV-RSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T +SP +VI LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTHTSQSPEEVIGWLNLKNQEPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I +EL+ IPVIM++A E V+ K GA DY+VKP EL
Sbjct: 64 PGITGLEILKLIREKEELKDIPVIMITALKESDVLQKAFDSGAIDYVVKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|392379365|ref|YP_004986524.1| putative sensor histidine kinase with multiple PAS and a response
regulator receiver domain (modular protein)
[Azospirillum brasilense Sp245]
gi|356881732|emb|CCD02725.1| putative sensor histidine kinase with multiple PAS and a response
regulator receiver domain (modular protein)
[Azospirillum brasilense Sp245]
Length = 1232
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+LL D++++ D V S L+ Y V +V + + A+ A + DL+L ++ +P+ G
Sbjct: 635 RLLLADDNADMRDYV-SRLLNGRYAVEAVPDGQAALAAMRA--NRPDLVLTDIMMPVLDG 691
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+L+ I D +L+ +PVI++SA+ V+ L GA DYLVKP EL+
Sbjct: 692 FGLLRAIREDADLRDLPVILLSARAGEEASVEGLSAGADDYLVKPFSARELI 743
>gi|398338890|ref|ZP_10523593.1| diguanylate cyclase [Leptospira kirschneri serovar Bim str. 1051]
gi|418676612|ref|ZP_13237890.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418694973|ref|ZP_13255999.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. H1]
gi|421091848|ref|ZP_15552613.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. 200802841]
gi|421108302|ref|ZP_15568842.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. H2]
gi|421130816|ref|ZP_15591008.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. 2008720114]
gi|400322512|gb|EJO70368.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|409957132|gb|EKO16047.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. H1]
gi|409999593|gb|EKO50284.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. 200802841]
gi|410006568|gb|EKO60319.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. H2]
gi|410357919|gb|EKP05124.1| diguanylate cyclase (GGDEF) domain protein [Leptospira kirschneri
str. 2008720114]
Length = 330
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIGWLNLKNQEPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I +EL+ IPVIM++A E V+ K GA DY+VKP EL
Sbjct: 64 PGITGLEILKLIREKEELKDIPVIMITALKESDVLQKAFDSGAIDYVVKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|337278869|ref|YP_004618340.1| atypical hybrid histidine kinase [Ramlibacter tataouinensis TTB310]
gi|334729945|gb|AEG92321.1| candidate histidine kinase, atypical hybrid [Ramlibacter
tataouinensis TTB310]
Length = 2390
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D+ + A+ S+L +V S + RQ ID + + D+ ++L ++ +P G
Sbjct: 2271 KVLVVDDDARNIFALTSVLENHEMEVLSATNGRQAIDIIGST-PDLTMVLMDIMMPEMDG 2329
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I +D + +P++ ++A+ KCL GA+DY+ KP+ TN+LL+L +W
Sbjct: 2330 YETMREIRKDPAFRTLPILALTAKAMKGDREKCLDAGASDYISKPVNTNQLLSL-MRVWL 2388
Query: 154 RR 155
R
Sbjct: 2389 YR 2390
>gi|315445373|ref|YP_004078252.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium gilvum Spyr1]
gi|315263676|gb|ADU00418.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium gilvum Spyr1]
Length = 1386
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 18 GNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
G K G G + R+L+ D++++ + + LL Y V +V RQ ++A+ AE
Sbjct: 618 GPEKPIGTGTL----ARVLVADDNADMREYLGRLLRSDGYAVEAVVDGRQALEAIRAEPP 673
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D L++++V +P GL ++ + D+ +PV+++SA+ + L+ GA DYLVK
Sbjct: 674 D--LVISDVMMPRLDGLGLVSELRADRRTAAVPVLLLSARAGQEASISGLQAGADDYLVK 731
Query: 138 PLRTNELL 145
P ELL
Sbjct: 732 PFAAAELL 739
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L +DS+ A+ + +++ S ++VT+V S ++ ++ L E ++ +I+ + +P G
Sbjct: 19 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTE-PNVSMIITDYCMPEMTGY 77
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
++LK + +L++IPV++MS+++ + + +CL GA D+LVKP+R +++ +++ + R
Sbjct: 78 ELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAEDFLVKPVRASDVSRVFSRVLR 136
>gi|168699248|ref|ZP_02731525.1| response regulator receiver domain protein (CheY-like) [Gemmata
obscuriglobus UQM 2246]
Length = 406
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 34 RILLC-DNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
RIL+ DND+N + L +Q + R+ +DA+ + DL+L ++ +P
Sbjct: 162 RILVVEDNDANRV-MLCRRLGSRGFQTVEAANGREALDAVRR--APFDLVLCDIMMPEVD 218
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
G ++L+ + D+ LQ +PVIM+SA DE + VV+C+ +GA DYL KP
Sbjct: 219 GYEVLRQLKADQNLQSLPVIMVSAIDETAEVVRCIEMGAEDYLHKP 264
>gi|440801589|gb|ELR22603.1| Multisensor hybrid histidine kinase, putative [Acanthamoeba
castellanii str. Neff]
Length = 1735
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K RILL D++ + + V LL Y+V SV + + L + +DL+L +V +P
Sbjct: 851 TKARILLADDNFDMREYVARLL-SAKYEVISVSNGLEAASVLRSNPQGVDLVLTDVMMPF 909
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +LK I Q +PVIM+SA+ + L GA DYL KP ELL+
Sbjct: 910 LDGFGLLKEIRSRDATQTLPVIMLSARAGEEASAEGLAEGADDYLTKPFTARELLS 965
>gi|427707723|ref|YP_007050100.1| response regulator receiver sensor signal transduction histidine
kinase [Nostoc sp. PCC 7107]
gi|427360228|gb|AFY42950.1| response regulator receiver sensor signal transduction histidine
kinase [Nostoc sp. PCC 7107]
Length = 429
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + + S L + +++V +VRS + + LN++ DLIL +V +P G
Sbjct: 20 VLVVDDNPANLQVLSSFLDESNFEVWAVRSGEKALQKLNSDNLP-DLILLDVMMPGMDGF 78
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ +++ D + IP+I M+A E VK LRLGA DY+ KP + E+L H +
Sbjct: 79 ETCQHLKNDPRSEDIPIIFMTALSETDDKVKGLRLGAVDYITKPFQHEEVLVRIEHHLQL 138
Query: 155 RRM 157
R +
Sbjct: 139 RNL 141
>gi|398837422|ref|ZP_10594716.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM102]
gi|398118919|gb|EJM08640.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM102]
Length = 461
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL ++D +A+ L+ + T+V S + ++A+ AE +L+L++V++P
Sbjct: 3 IKVLLVEDDRALREALADTLLLAGHDYTAVGSAEEALEAVGAE--SFNLVLSDVNMPGMD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
G ++L + R ++ Q +PV++M+A V V +R GAADYLVKP LL+L
Sbjct: 61 GHQLLGLL-RARQPQ-LPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDL 113
>gi|309791654|ref|ZP_07686146.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG-6]
gi|308226276|gb|EFO80012.1| cyclic nucleotide-binding protein [Oscillochloris trichoides DG6]
Length = 848
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D++ + + + L + YQVT V +DAL++ DL+L ++ +P G
Sbjct: 168 LLLVDDNDMNREMLSRRLERMDYQVTQVNDGYPALDALHSHS--FDLVLLDIMMPGLDGY 225
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
+L+ + D +L+ +PVI++SA D+++ VV+ + LGA DYL KP
Sbjct: 226 AVLRAMRDDVDLRHVPVIVLSALDDIASVVQAIELGADDYLPKP 269
>gi|210616118|ref|ZP_03290951.1| hypothetical protein CLONEX_03170 [Clostridium nexile DSM 1787]
gi|210149938|gb|EEA80947.1| hypothetical protein CLONEX_03170 [Clostridium nexile DSM 1787]
Length = 226
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RILL ++D + + ++ L +Q+ RQ ++ L +E D L++ +V LP
Sbjct: 2 IRILLIEDDEHIAQSIQFFLEGEGFQIKVAAMARQAMELLKSE--DFQLVILDVTLPDGN 59
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G ++ + I KEL PVI ++A D +VK LGA +Y+ KP R ELL+ ++
Sbjct: 60 GFELFEEIKARKEL---PVIFLTALDGEEEIVKGFELGADEYITKPFRPRELLSRIRNVI 116
Query: 153 RRRRMLGLAEKN 164
R G+ E+N
Sbjct: 117 RHT---GILEEN 125
>gi|124268373|ref|YP_001022377.1| twitching motility protein [Methylibium petroleiphilum PM1]
gi|124261148|gb|ABM96142.1| Twitching motility protein [Methylibium petroleiphilum PM1]
Length = 121
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D+ + LLVK YQV + + + + L E D LIL +V +P G
Sbjct: 5 KILLVDDSKTELHFLSELLVKRGYQVRTAENGEEAMRRLGEEKPD--LILMDVVMPGQNG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++ + ITRD +PVIM +++++ + V +R GA DY+VKP+ +EL+
Sbjct: 63 FQLTRAITRDVRFTDVPVIMCTSKNQETDKVWGMRQGARDYVVKPVDADELI 114
>gi|186473035|ref|YP_001860377.1| multi-sensor hybrid histidine kinase [Burkholderia phymatum STM815]
gi|184195367|gb|ACC73331.1| multi-sensor hybrid histidine kinase [Burkholderia phymatum STM815]
Length = 1165
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL ++D + A+ ++ + R+ R+ ++ LN+ G ++DL+L ++ +P GL
Sbjct: 1046 ILLAEDDVRNIFALSHVIEPLGASLAIARNGREALETLNS-GREVDLVLMDIMMPEMDGL 1104
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ +I RD +P+I ++A+ ++CL GA DY+ KP+ ++L++L +W R
Sbjct: 1105 TAISHIRRDSRFAHLPIIALTAKAMAQDRMRCLEAGADDYISKPIDVDKLVSL-CRVWLR 1163
Query: 155 RR 156
+R
Sbjct: 1164 QR 1165
>gi|428212579|ref|YP_007085723.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
gi|428000960|gb|AFY81803.1| family 3 adenylate cyclase [Oscillatoria acuminata PCC 6304]
Length = 354
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D+ + D + L + Y V + ++ + AE DL+L ++ +P G
Sbjct: 8 VLVVDDVEANRDLLCRRLKRQGYHVKIAEDGLKALELIRAE--PFDLVLLDIMMPHLNGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ I D L+ IPVIM+SA D++ VVKC+ LGA DYL KP
Sbjct: 66 QVLEEIKADSSLRHIPVIMISAVDDIDSVVKCIELGAEDYLSKPF 110
>gi|152997453|ref|YP_001342288.1| two component sigma-54-specific Fis family transcriptional
regulator [Marinomonas sp. MWYL1]
gi|150838377|gb|ABR72353.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas sp. MWYL1]
Length = 448
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S+V++L+ ++D ++A+ L+ SYQ V S + + AL + S D+++++V+LP
Sbjct: 2 SEVKLLIVEDDKGLAEALEDTLMLASYQCKIVYSSEEAVVAL--KHSLFDMVISDVNLPG 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G +L ++ +P+++M+A +++ V+ +R GA DYL+KP + ELLN
Sbjct: 60 MDGYGLLHHVI--DTYPELPMMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLN 113
>gi|194334335|ref|YP_002016195.1| Fis family two component sigma54 specific transcriptional regulator
[Prosthecochloris aestuarii DSM 271]
gi|194312153|gb|ACF46548.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Prosthecochloris aestuarii DSM 271]
Length = 479
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K ++L+ D++ +S + + K Y+ + I+ L E +ID++L ++ +P
Sbjct: 19 KNKVLVADDEQSSRIMLGHFIKKMGYEPIYAIDGEECIEILERE--EIDILLLDIHMPKK 76
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G +++ Y+ +D + RIPVIM++A E+ V+C+++GA +YL KPL T L
Sbjct: 77 DGFEVMTYL-KDHNI-RIPVIMVTASHEIPKTVRCIKMGAYEYLTKPLDTERL 127
>gi|456874770|gb|EMF90042.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. ST188]
Length = 330
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VID L+ + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIDWLSLKSQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++L+ I +EL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGITGLEILELIRGKEELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|83310215|ref|YP_420479.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
gi|82945056|dbj|BAE49920.1| Serine phosphatase RsbU regulator sigma subunit [Magnetospirillum
magneticum AMB-1]
Length = 537
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D+ + D + L + +QV +V ++A+ G DL+L ++ +P G
Sbjct: 160 RVLVADDSKANRDVLVRYLSREGHQVVAVADGLAAVEAVF--GQAFDLVLLDMIMPGMNG 217
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++LK I D L+ +PVIM+SA D + +V+C+ GA DYL KP
Sbjct: 218 DEVLKAIKADSRLRSLPVIMISALDGLDSIVRCIEAGAEDYLPKPF 263
>gi|410450363|ref|ZP_11304404.1| diguanylate cyclase (GGDEF) domain protein [Leptospira sp. Fiocruz
LV3954]
gi|418744155|ref|ZP_13300511.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. CBC379]
gi|418751834|ref|ZP_13308106.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. MOR084]
gi|421114338|ref|ZP_15574760.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. JET]
gi|422004198|ref|ZP_16351420.1| GGDEF domain-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409967563|gb|EKO35388.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. MOR084]
gi|410015876|gb|EKO77967.1| diguanylate cyclase (GGDEF) domain protein [Leptospira sp. Fiocruz
LV3954]
gi|410794606|gb|EKR92506.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. CBC379]
gi|410800297|gb|EKS06493.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. JET]
gi|417257176|gb|EKT86582.1| GGDEF domain-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 330
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VID L+ + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIDWLSLKSQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++L+ I +EL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGITGLEILELIRGKEELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|431792996|ref|YP_007219901.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfitobacterium dichloroeliminans
LMG P-21439]
gi|430783222|gb|AGA68505.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 234
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V+ILL ++D + + L + Y V +V + ++ L E D LIL +V LP
Sbjct: 2 VKILLVEDDKMIQELITFNLEREGYIVETVDEGKSALEFLKKEKPD--LILLDVMLPELD 59
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++ K I + E +P+IM+SA+DE++ V L LGA DY+ KP T ELL
Sbjct: 60 GFEVCKAIRGNIETANLPIIMLSARDEITDKVVGLELGADDYVTKPFSTQELL 112
>gi|359686336|ref|ZP_09256337.1| GGDEF domain-containing protein [Leptospira santarosai str.
2000030832]
Length = 330
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEGSD-----IDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VID L+ + D LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTYTSQSPEEVIDWLSLKSQDPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++L+ I +EL+ IPVIM++A E +V+ K GA DY++KP EL
Sbjct: 64 PGITGLEILELIRGKEELKDIPVIMITALKESNVLQKAFDSGAIDYVIKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|357476233|ref|XP_003608402.1| GATA transcription factor [Medicago truncatula]
gi|355509457|gb|AES90599.1| GATA transcription factor [Medicago truncatula]
Length = 334
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 466 NKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
+KV RR A+L++FR+KRKERCF+KKIRY RK +AER R GQF
Sbjct: 103 SKVSRRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFA 148
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL D DS S+ + S L Y V + + + + A++ E + + EV M+
Sbjct: 18 LRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHVAIVEVS--MSN 75
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+ K++ K+L P IM S+ D ++ ++KC+ LGA ++L KPL ++L N+W H+
Sbjct: 76 SSRSFKFLETSKDL---PTIMTSSIDCLNTMMKCIALGAVEFLRKPLSEDKLRNIWQHV 131
>gi|402491461|ref|ZP_10838249.1| GAF sensor hybrid histidine kinase [Rhizobium sp. CCGE 510]
gi|401809860|gb|EJT02234.1| GAF sensor hybrid histidine kinase [Rhizobium sp. CCGE 510]
Length = 2007
Score = 65.9 bits (159), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1889 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINNEAS-VAIVLMDIMMPGMDGY 1947
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 1948 ETMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2006
Score = 41.2 bits (95), Expect = 1.3, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1716 MSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDITSVGSGSE 1775
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
++AL + D ++ ++ LP G ++L+ I D E+ IPV++ + ++ + L
Sbjct: 1776 ALEALRQDPPDC--VVLDLSLPDMSGFEVLEKIRDDAEIGEIPVVVFTGRELSAEEDATL 1833
Query: 128 RLGAADYLVKPLRTNELL 145
A +VK + + E L
Sbjct: 1834 HSMARSVVVKGVESPERL 1851
>gi|333985047|ref|YP_004514257.1| LuxR family transcriptional regulator [Methylomonas methanica MC09]
gi|333809088|gb|AEG01758.1| two component transcriptional regulator, LuxR family [Methylomonas
methanica MC09]
Length = 612
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
I++ D+D S + ++L C+Y + S + +++A + DLIL ++ +P GL
Sbjct: 5 IIVVDDDQTSLKLLDNILSACNYSIRLFVSGDLALRSMHA--AKPDLILLDIRMPNMNGL 62
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTHM 151
++ + + RD+ L+ IPVI +SA ++ +K + G DY+ KP T E+L + TH+
Sbjct: 63 EICQKLKRDERLKDIPVIFLSAATDIEDKIKAFQAGGVDYITKPFHTEEILARVATHL 120
>gi|424892260|ref|ZP_18315840.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|424893513|ref|ZP_18317093.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393183541|gb|EJC83578.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393184794|gb|EJC84831.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 2099
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINNE-SSVAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
Score = 39.3 bits (90), Expect = 5.0, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1808 MSKPTTPEGLGKALSRLKAYSQPRRKHLLLVEDNEAERMSVTALLGHDDIDITSVGSGSE 1867
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQD 118
+ AL + D ++ ++ LP G ++L+ I D E+ +PV++ + ++
Sbjct: 1868 ALAALRQDPPDC--VVLDLSLPDMSGFEVLEQIRDDAEIGEVPVVVFTGRE 1916
>gi|223938397|ref|ZP_03630291.1| two component, sigma54 specific, transcriptional regulator, Fis
family [bacterium Ellin514]
gi|223892966|gb|EEF59433.1| two component, sigma54 specific, transcriptional regulator, Fis
family [bacterium Ellin514]
Length = 476
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL ++D+ ++DA+ +LV Y V+ R AE + D++++++ LP GL
Sbjct: 7 LLLIEDDAGAADALRRVLVNEGYTVSC--EGRGDSGLGTAETINFDVVISDLKLPGLDGL 64
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
+++K + + K R+P+I+M+A ++ +LGA DYL+KP ELL+L
Sbjct: 65 ELVKRLHQAK--PRLPIILMTAHGTTETAIEATKLGAYDYLLKPFEMEELLDL 115
>gi|357465211|ref|XP_003602887.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|355491935|gb|AES73138.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 377
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K+ + RR A+L+++R+KRKERCFDKKIRY RK +AER R +GQF
Sbjct: 124 KLPNLSRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFA 171
>gi|407000802|gb|EKE17983.1| hypothetical protein ACD_10C00180G0003 [uncultured bacterium]
Length = 121
Score = 65.9 bits (159), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+ +L K YQV++ + Q I A+ S DLIL +V +P G
Sbjct: 6 ILVVDDSPTERFFTVDVLTKAGYQVSTAENGEQGI--AKAKASKPDLILMDVVMPGLNGY 63
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ + +TRD+E + IPVI+ +++ + + + LR GA DYLVKPL ELL
Sbjct: 64 QATRTLTRDEETKGIPVIVCTSKGQETDRIWGLRQGAVDYLVKPLNPEELL 114
>gi|92112237|ref|YP_572165.1| two component heavy metal response transcriptional regulator
[Chromohalobacter salexigens DSM 3043]
gi|91795327|gb|ABE57466.1| two component heavy metal response transcriptional regulator,
winged helix family [Chromohalobacter salexigens DSM
3043]
Length = 223
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNA----EGSDIDLILAEVDL 88
+RILL +++S ++D + L + Y+V R D L+ E +D +LI+ +V L
Sbjct: 1 MRILLVEDESKTADYLARGLGEAGYRVEVAR------DGLDGRHLIEEADFELIILDVML 54
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW 148
P G ++L+ I R + +PV+ ++A+D V VK L LGA DYLVKP ELL
Sbjct: 55 PGLDGWELLRLIRRHGQ---VPVLFLTARDAVEYRVKGLELGADDYLVKPFSFVELLARV 111
Query: 149 THMWRR 154
+ RR
Sbjct: 112 RTLLRR 117
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 26 GFIDRSK-VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
G+ D K +R+LL + DS+S+ + L Y+V++ + + AL++ + +
Sbjct: 10 GWKDFPKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAIV 69
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV + G K++ K+L P IM S ++ ++KC+ LGA ++L KPL ++L
Sbjct: 70 EVSTSCSLG--GFKFLENAKDL---PTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKL 124
Query: 145 LNLWTHMWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRRSTNPE 203
N+W H+ + G +N+LS V ++ + L +D DKSR S + E
Sbjct: 125 KNIWQHVVHKAFNSG---ENVLSESLKPV----KESVESMLQLQTDIGQDKSRISIDLE 176
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D+ S + +LL + Y+VT+V S ++ ++ L +E ++ +I+ + +P G
Sbjct: 95 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSE-PNVSMIITDYWMPEMTGY 153
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+LK I EL++IPV++MS+++ + + +CL GA D+L+KP+R ++ + + M
Sbjct: 154 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRITSRM 210
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D+ S + +LL + Y+VT+V S ++ ++ L +E ++ +I+ + +P G
Sbjct: 93 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSE-PNVSMIITDYWMPEMTGY 151
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+LK I EL++IPV++MS+++ + + +CL GA D+L+KP+R ++ + + M
Sbjct: 152 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRITSRM 208
>gi|86360995|ref|YP_472882.1| two-component sensor histidine kinase/response regulator hybrid
protein [Rhizobium etli CFN 42]
gi|86285097|gb|ABC94155.1| probable two-component sensor histidine kinase/response regulator
hybrid protein [Rhizobium etli CFN 42]
Length = 2099
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINTEPS-VAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D + + + ++ + +YQV+ + + L + +I++++ + +P GL
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ LK IT +L PV++MS ++ V+K GA DY+VKP++ + N+W H+ R+
Sbjct: 96 QALKSITSKLDL---PVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 155 RRML 158
R +
Sbjct: 153 RLIF 156
>gi|220933274|ref|YP_002512173.1| Hpt sensor hybrid histidine kinase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219994584|gb|ACL71186.1| Hpt sensor hybrid histidine kinase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 866
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RIL+ ++++ + + +L + ++VT V + +D L+A D DL++ ++++P+
Sbjct: 598 LRILVAEDNTVNQQVISGILERAGHKVTVVGNGEAALDLLSARARDFDLMILDMNMPVMG 657
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
GL +LK E R+P I+++A +V C GA YL KPL LL+
Sbjct: 658 GLDVLKARGFMAEEARLPAIVLTADATTEALVACREAGAEAYLTKPLDARRLLD 711
>gi|224535352|ref|ZP_03675891.1| hypothetical protein BACCELL_00214, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224523030|gb|EEF92135.1| hypothetical protein BACCELL_00214 [Bacteroides cellulosilyticus
DSM 14838]
Length = 318
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ ++D + + L K +QV SV S + L EG+D LIL+++ LP G+
Sbjct: 4 ILIVEDDITYGMMLKTWLGKKGFQVASVSSIARAQKHLETEGAD--LILSDLRLPDKDGI 61
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+LK++ ++ IP+IMM++ ++ V+ ++LGA+DY+ KP+ +ELL
Sbjct: 62 DLLKWL--GEQGLSIPLIMMTSYADIQSAVQAMKLGASDYVAKPVNPDELL 110
>gi|24215228|ref|NP_712709.1| GGDEF domain receiver component of a two component response
regulator [Leptospira interrogans serovar Lai str.
56601]
gi|45657320|ref|YP_001406.1| response regulator [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|386074526|ref|YP_005988843.1| diguanylate cyclase [Leptospira interrogans serovar Lai str. IPAV]
gi|417762578|ref|ZP_12410567.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. 2002000624]
gi|417766785|ref|ZP_12414735.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775066|ref|ZP_12422926.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. 2002000621]
gi|417783566|ref|ZP_12431284.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. C10069]
gi|418670245|ref|ZP_13231617.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418671490|ref|ZP_13232841.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. 2002000623]
gi|418692202|ref|ZP_13253281.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. FPW2026]
gi|418700015|ref|ZP_13260960.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418708884|ref|ZP_13269684.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418724822|ref|ZP_13283606.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. UI 12621]
gi|418728369|ref|ZP_13286942.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. UI 12758]
gi|421083922|ref|ZP_15544791.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. HAI1594]
gi|421102209|ref|ZP_15562817.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421119269|ref|ZP_15579593.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. Brem 329]
gi|421124282|ref|ZP_15584542.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421133192|ref|ZP_15593342.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|24196312|gb|AAN49727.1| GGDEF domain receiver component of a two component response
regulator [Leptospira interrogans serovar Lai str.
56601]
gi|45600558|gb|AAS70043.1| response regulator [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|353458315|gb|AER02860.1| GGDEF domain receiver component of a two component response
regulator [Leptospira interrogans serovar Lai str. IPAV]
gi|400350923|gb|EJP03175.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357992|gb|EJP14111.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. FPW2026]
gi|409941571|gb|EKN87199.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. 2002000624]
gi|409953190|gb|EKO07691.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. C10069]
gi|409961719|gb|EKO25462.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. UI 12621]
gi|410022618|gb|EKO89393.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347899|gb|EKO98750.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. Brem 329]
gi|410368037|gb|EKP23417.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410433578|gb|EKP77920.1| diguanylate cyclase (GGDEF) domain protein [Leptospira santarosai
str. HAI1594]
gi|410438201|gb|EKP87297.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410575163|gb|EKQ38185.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. 2002000621]
gi|410581449|gb|EKQ49259.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. 2002000623]
gi|410754016|gb|EKR15673.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410760887|gb|EKR27080.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410770814|gb|EKR46027.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776886|gb|EKR56861.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
str. UI 12758]
gi|455789345|gb|EMF41274.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456825475|gb|EMF73871.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456971589|gb|EMG12172.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
gi|456985428|gb|EMG21244.1| diguanylate cyclase (GGDEF) domain protein [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 330
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVT-SVRSPRQVIDALNAEG-----SDIDLILAEVDL 88
IL+ D+ + + +L K Y+ T + +SP +VI LN + + LIL ++ L
Sbjct: 4 ILILDDAQENCMLMQGILRKSGYKNTFTSQSPDEVIGWLNLKNQEPPQKECSLILLDILL 63
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL---- 144
P GL++LK I +EL+ IPVIM++A E V+ K GA DY+VKP EL
Sbjct: 64 PGITGLEILKLIREKEELKDIPVIMITALKESDVLQKAFDSGAIDYVVKPFDAIELLARV 123
Query: 145 ---LNLWTHMWRRR 155
L L+ M RR+
Sbjct: 124 RSALRLFEEMTRRK 137
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D + + + ++ + +YQV+ + + L + +I++++ + +P GL
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ LK IT +L PV++MS ++ V+K GA DY+VKP++ + N+W H+ R+
Sbjct: 96 QALKSITSKLDL---PVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 155 RRML 158
R +
Sbjct: 153 RLIF 156
>gi|424883806|ref|ZP_18307434.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392515467|gb|EIW40200.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 2099
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMKVLTATTGSEAIDVINNEPS-VAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQLIRSEPRFRRLPIVALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
Score = 40.0 bits (92), Expect = 2.9, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1808 MSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDITSVGSGSE 1867
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+ AL +D ++ ++ LP G +L+ I D E+ +PV++ + ++ + L
Sbjct: 1868 ALAALRQNAADC--VVLDLSLPDMSGFDVLEQIRDDAEIGEVPVVVFTGRELSAEEDAAL 1925
Query: 128 RLGAADYLVKPLRTNELL 145
A +VK + + E L
Sbjct: 1926 HSMARSVVVKGVESPERL 1943
>gi|440800791|gb|ELR21826.1| response regulator receiver domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 899
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
+ R+LL D++ + + V LL + Y VT+ + + + + E IDL+L +V +P+
Sbjct: 174 RFRVLLADDNFDMREYVTKLLSE-RYDVTTASNGMEALAMVQQE--PIDLVLTDVMMPLM 230
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTH 150
G +LK + E + IPVI++SA+ V+ L GA DYL+KP ELL + +H
Sbjct: 231 DGFTLLKALRATSETRMIPVILLSARAGEESKVEGLEAGADDYLIKPFTARELLARVGSH 290
Query: 151 --MWRRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTDDKSRR 198
M R R E+ L + D++ D D F DT+DK R
Sbjct: 291 LDMVRMRSEAARREQE-LRFQEDMLGRDVWD--------FMADTEDKVVR 331
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D + + + ++ + +YQV+ + + L + +I++++ + +P GL
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ LK IT +L PV++MS ++ V+K GA DY+VKP++ + N+W H+ R+
Sbjct: 96 QALKSITSKLDL---PVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 155 RRML 158
R +
Sbjct: 153 RLIF 156
>gi|189465530|ref|ZP_03014315.1| hypothetical protein BACINT_01888 [Bacteroides intestinalis DSM
17393]
gi|189437804|gb|EDV06789.1| response regulator receiver domain protein [Bacteroides
intestinalis DSM 17393]
Length = 119
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D S V S+ + Y P + ID L+ EG++ DLI++++ +P G
Sbjct: 3 QILLVD-DKASIGKVLSMYLGKEYDFVYCEDPLKAIDWLH-EGNEPDLIISDIRMPKMTG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ + IPV+M+S+++ + ++ L GA DY++KP EL
Sbjct: 61 SEFLHYLKSNELFKHIPVMMLSSEESTTERIRLLEEGAVDYILKPFNPMEL 111
>gi|296272386|ref|YP_003655017.1| winged helix family two component transcriptional regulator
[Arcobacter nitrofigilis DSM 7299]
gi|296096560|gb|ADG92510.1| two component transcriptional regulator, winged helix family
[Arcobacter nitrofigilis DSM 7299]
Length = 221
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+I+L ++D N S + L +CS+ V V + I N + D LIL +++LP G
Sbjct: 6 KIMLIEDDENCSFLIKVFLEECSFDVDVVNTVTSAIS--NTKFFDYSLILLDINLPDYNG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL-LNLWTHMW 152
++LKY+ K IP+I++SA + + + +LGA DY+VKP+ +EL +W +
Sbjct: 64 FEVLKYLNTHKN---IPIIVLSAYSDKKIKLMAFKLGARDYMVKPIDPDELEARIWVQLR 120
Query: 153 RRRRMLGLAEKNIL 166
+ ++ + K I
Sbjct: 121 QISNIVEIKNKKIF 134
>gi|190894793|ref|YP_001985086.1| putative two-component sensor histidine kinase/response regulator
hybrid protein [Rhizobium etli CIAT 652]
gi|190700454|gb|ACE94536.1| probable two-component sensor histidine kinase/response regulator
hybrid protein [Rhizobium etli CIAT 652]
Length = 2100
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1982 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINTEPS-VAIVLMDIMMPGMDGY 2040
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2041 ETMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2099
Score = 42.7 bits (99), Expect = 0.56, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + + ++LL ++D +V +LL +TSV S +
Sbjct: 1809 MSKPTTPEGLGKALSRLKAYAEPRRKQLLLVEDDEAERLSVTALLGHDDIDITSVGSGSE 1868
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+ AL +D ++ ++ LP G ++L+ I D E+ +PV++ + ++ + L
Sbjct: 1869 ALAALRRNSADC--VVLDLSLPDMSGFEVLEQIRDDVEIGEVPVVVFTGRELSAEEDATL 1926
Query: 128 RLGAADYLVKPLRTNELL 145
A +VK + + E L
Sbjct: 1927 HSMARSVVVKGVESPERL 1944
>gi|116249380|ref|YP_765221.1| two-component histidine kinase/response regulator motif-containing
protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254030|emb|CAK12427.1| putative repetitive protein with two-component sensor and regulator
motifs [Rhizobium leguminosarum bv. viciae 3841]
Length = 2099
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMKVLTATTGSEAIDVINNEPS-VAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQVIRSEPRFRRLPIVALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
Score = 38.9 bits (89), Expect = 7.4, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1808 MSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDITSVGSGSE 1867
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+ AL +D ++ ++ LP G +L+ + D E+ +PV++ + ++ + L
Sbjct: 1868 ALAALRQNSADC--VVLDLSLPDMSGFDVLEQMRDDAEIGEVPVVVFTGRELSAEEDAAL 1925
Query: 128 RLGAADYLVKPLRTNELL 145
A +VK + + E L
Sbjct: 1926 HSMARSVVVKGVESPERL 1943
>gi|241113448|ref|YP_002973283.1| GAF sensor hybrid histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861656|gb|ACS59322.1| GAF sensor hybrid histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 2099
Score = 65.5 bits (158), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMKVLTATTGSEAIDVINNEPS-VAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQVIRSEPRFRRLPIVALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
Score = 44.3 bits (103), Expect = 0.16, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1808 MSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDITSVGSGSE 1867
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+DAL +D ++ ++ LP G +L+ I D E++ +PV++ + ++ + L
Sbjct: 1868 ALDALRQNAADC--VVLDLSLPDMSGFDVLEQIRDDAEIREVPVVVFTGRELSAEEDAAL 1925
Query: 128 RLGAADYLVKPLRTNELL 145
A +VK + + E L
Sbjct: 1926 HSMARSVVVKGVESPERL 1943
>gi|428775266|ref|YP_007167053.1| multi-sensor hybrid histidine kinase [Halothece sp. PCC 7418]
gi|428689545|gb|AFZ42839.1| multi-sensor hybrid histidine kinase [Halothece sp. PCC 7418]
Length = 814
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 30 RSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLP 89
R IL+ D++++ + +L K +YQV + S + + A+ S LIL ++ +P
Sbjct: 44 RQNSLILVIDDNASDLQLLSRVLQKVNYQVLTASSGTEGLQI--AKTSKPHLILLDLMMP 101
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL---N 146
GL++ +++ D +LQ+IPVI ++A E + + ++GAADY+ KPL+ ELL N
Sbjct: 102 NMDGLQVCQHLKADADLQQIPVIFLTASWEDQQLEQAFQVGAADYVTKPLKKIELLARIN 161
Query: 147 LWTHMWRRRRMLGLAEK 163
+ + +++R+L A K
Sbjct: 162 VHLELQQKQRLLETALK 178
>gi|24374742|ref|NP_718785.1| two component signal transduction system controlling flagella
biosynthesis Sigma54-dependent response regulator FlrC
[Shewanella oneidensis MR-1]
gi|24349404|gb|AAN56229.1| two component signal transduction system controlling flagella
biosynthesis Sigma54-dependent response regulator FlrC
[Shewanella oneidensis MR-1]
Length = 446
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S+ ++LL ++D++ +A+ L+ Y V S + I AL DL++++V +P
Sbjct: 2 SEAKLLLVEDDASLREALLDTLMLAQYDCIDVASGEEAILALKQH--QFDLVISDVQMPG 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
GL +L Y+ + ++PV++M+A + V ++LGA DYL KP LLN
Sbjct: 60 IGGLGLLNYLQQHHP--KLPVLLMTAYATIGSAVSAIKLGAVDYLAKPFAPEVLLN 113
>gi|357392257|ref|YP_004907098.1| putative two-component system response regulator [Kitasatospora
setae KM-6054]
gi|311898734|dbj|BAJ31142.1| putative two-component system response regulator [Kitasatospora
setae KM-6054]
Length = 263
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD-IDLILAEVDLPMT 91
+R+LL ++D + A+ ++L + +QV RS + +DAL +GSD ++L ++ LP
Sbjct: 1 MRLLLVEDDDRVAAALVAVLGRHGFQVRHARSGHEALDALVPDGSDPYRVVLLDLGLPDR 60
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G ++ +R + +PVIM++A+ ++ + L LGA DY+VKP ELL +
Sbjct: 61 DGFEV---CSRIRAGSGVPVIMVTARADIRSRIHGLNLGADDYVVKPYDMGELLARIHAV 117
Query: 152 WRR 154
RR
Sbjct: 118 ARR 120
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 25 DGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEG-------- 76
D IDR + LL + S + LL S+QVT+V S + ++ L +
Sbjct: 16 DSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHP 75
Query: 77 --SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
++++LI+ + +P G +L+ I L+ IPV++MS+++ S + +CL GA D+
Sbjct: 76 QETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDF 135
Query: 135 LVKPLRTNELLNLWTHMWRRRRML 158
+KP++ +++ L H+ R +L
Sbjct: 136 FLKPVQLSDVNKLRPHLLGSRTLL 159
>gi|398859818|ref|ZP_10615484.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM79]
gi|398235976|gb|EJN21778.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM79]
Length = 461
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL ++D +A+ L+ + T+V S + + A+ AE +L+L++V++P
Sbjct: 3 IKVLLVEDDRALREALADTLLLAGHDYTAVGSAEEALAAVGAEA--FNLVLSDVNMPGMD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
G ++L + R ++ Q +PV++M+A V V +R GAADYLVKP LL+L
Sbjct: 61 GHQLLGLL-RARQPQ-LPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDL 113
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D+ S + +LL + Y+VT+V S ++ ++ L +E ++ +I+ + +P G
Sbjct: 94 VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSE-PNVSMIITDYWMPEMTGY 152
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+LK I EL++IPV++MS+++ + + +CL GA D+L+KP+R ++ + + M
Sbjct: 153 DLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRITSRM 209
>gi|24251269|gb|AAN46189.1| unknown protein [Synechococcus elongatus PCC 7942]
Length = 411
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ +++ + D + L + + V V S ++ ++ L + DL+ +V +P G
Sbjct: 174 RLLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQLAQQP--FDLLFLDVMMPGLTG 231
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D L +PV+M+SA D++ V++CLRLGA DYL KP
Sbjct: 232 FEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYLTKPF 277
>gi|428776207|ref|YP_007167994.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Halothece sp. PCC 7418]
gi|428690486|gb|AFZ43780.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Halothece sp. PCC 7418]
Length = 578
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+D ++ D + +LL YQ+ + + ++ L IDLIL ++ +P GL
Sbjct: 11 ILIVDDDPDNYDVIENLLYAQDYQLYYAQEGKIALEQLRE--VKIDLILLDLMMPEMDGL 68
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
++ + I RD+ Q +P+IM++A + + +CL GA D++ KPL EL
Sbjct: 69 ELCQIIKRDRAYQGVPIIMVTALNTTVNLSQCLEAGADDFIGKPLNGTEL 118
>gi|335042045|ref|ZP_08535072.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain containing protein [Methylophaga
aminisulfidivorans MP]
gi|333788659|gb|EGL54541.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain containing protein [Methylophaga
aminisulfidivorans MP]
Length = 349
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+ ++ +LL + SY+ + S + + LN++ +D DLIL ++ +P G
Sbjct: 6 QILIVDDVPDNIQVAMNLLREDSYEFSFANSGEKALSILNSDDADFDLILLDIMMPGIDG 65
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTHMW 152
+ K I + Q IP+I ++A+ +V + K + DY+ KP ELL + TH+
Sbjct: 66 YETCKRIKASSQYQDIPIIFLTAKADVDSIAKAFQADGVDYVTKPFHAAELLARVRTHIQ 125
Query: 153 RRRRMLGLAEKNI 165
+ L ++NI
Sbjct: 126 LYQTKKWLEQQNI 138
>gi|427713202|ref|YP_007061826.1| diguanylate cyclase [Synechococcus sp. PCC 6312]
gi|427377331|gb|AFY61283.1| diguanylate cyclase (GGDEF) domain-containing protein
[Synechococcus sp. PCC 6312]
Length = 475
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
SK +LL D+ + + LLVK Y V SV S + + + + DI IL ++ +P
Sbjct: 23 SKGNVLLVDDIPENLQLLSDLLVKLGYTVRSVTSGKMALKTMRVKQPDI--ILLDIKMPE 80
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++ + + D++L+ IPVI +SA D+V VK +G DY+ KP + E++
Sbjct: 81 MDGYQVCQALKADEDLKHIPVIFISALDDVFDKVKAFNVGGIDYITKPFQVEEVV 135
>gi|395006387|ref|ZP_10390208.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Acidovorax sp. CF316]
gi|394315598|gb|EJE52388.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Acidovorax sp. CF316]
Length = 250
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+D D V + L K Y+VT+V + R + L G +LI+ ++ LP GL
Sbjct: 12 ILVVDDDREIRDLVSAYLQKNGYRVTTVPTGRHMHQTLETAGP-FELIILDLMLPGEDGL 70
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ + + R + + +P+IM++A+ + + V L +GA DYL KP ELL + RR
Sbjct: 71 TLCRDL-RAGKFKAVPIIMLTARGDEADRVLGLEMGADDYLAKPFAARELLARIKSVLRR 129
Query: 155 RRML 158
RML
Sbjct: 130 TRML 133
>gi|329934250|ref|ZP_08284329.1| PAS/PAC sensor hybrid histidine kinase precursor [Streptomyces
griseoaurantiacus M045]
gi|329305846|gb|EGG49701.1| PAS/PAC sensor hybrid histidine kinase precursor [Streptomyces
griseoaurantiacus M045]
Length = 1389
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D++++ + + LL YQVT V + + A A DL++++V +P G
Sbjct: 641 RVLVADDNADMREYLARLLTAAGYQVTEVTDGVEALAA--ARRRTPDLVVSDVMMPRLDG 698
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
L+++ + D +PV+++SA+ ++ LR GA DYLVKP ELL
Sbjct: 699 LELVSRLRADPRTASVPVVLLSARAGQEASIEGLRAGADDYLVKPFAAAELL 750
>gi|395007817|ref|ZP_10391520.1| signal transduction histidine kinase, partial [Acidovorax sp. CF316]
gi|394314163|gb|EJE51105.1| signal transduction histidine kinase, partial [Acidovorax sp. CF316]
Length = 1222
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D+ + A+ S+L + +V S + RQ I+ ++ ++ ++L ++ +P G
Sbjct: 1103 KVLVVDDDARNIFALTSVLENHAVEVISATNGRQAIEIID-RTPELSMVLMDIMMPEMDG 1161
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ I +D+ +P++ ++A+ KCL GA+DY+ KP+ TN+LL+L W H
Sbjct: 1162 YETMREIRKDRRFGTLPILALTAKAMKGDREKCLEAGASDYIAKPVNTNQLLSLMRVWLH 1221
>gi|452853416|ref|YP_007495100.1| Signal transduction histidine kinase [Desulfovibrio piezophilus]
gi|451897070|emb|CCH49949.1| Signal transduction histidine kinase [Desulfovibrio piezophilus]
Length = 1393
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL D+D + A+ S+L + + V R+ + ID L E +IDL+L ++ +P+ G
Sbjct: 1276 ILLVDDDMRNVFALSSVLEEKTMDVVIARNGLEAIDKLK-EHDEIDLVLMDIMMPLMDGY 1334
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ I ++ + ++P+I ++A+ KC+ GA DYL KP+ T++LL++ W +
Sbjct: 1335 EAMQAIRKEHKYAKLPMIALTAKAMKGDRSKCIEAGANDYLAKPVNTDKLLSMLRVWLY 1393
>gi|88602714|ref|YP_502892.1| PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
gi|88188176|gb|ABD41173.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1]
Length = 393
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D+D + + + L+ Y+V+ + ++ L E D DLIL +V +P G
Sbjct: 7 RLLIVDDDPAIREFLKNRLMMEGYEVSEAEDAEKALERLE-EHPDTDLILLDVIMPGASG 65
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTHMW 152
+L+ + D+ +IPVIM++A V RLGA DYL KP T E+L + TH+
Sbjct: 66 FDLLRTLKEDRRYCQIPVIMVTALGLVQDKELAFRLGAGDYLTKPFDTREMLARIGTHIT 125
Query: 153 RRRR 156
+++
Sbjct: 126 LKKK 129
>gi|326524181|dbj|BAJ97101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 440 MCLQPGQVSA---NSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNR 496
+ LQPG SA +SW SPS V + R A ++++R+KRK R F K IRY +R
Sbjct: 135 LWLQPGLASAAWNSSW-----SPSEAVVVPSPADRAARVMRYREKRKNRKFHKTIRYASR 189
Query: 497 KRLAERRPRVRGQFVRKVNGVNVD 520
K AE RPRV+G+FV++ D
Sbjct: 190 KAYAEARPRVKGRFVKRPAAAATD 213
>gi|383820586|ref|ZP_09975841.1| PAS domain-containing protein [Mycobacterium phlei RIVM601174]
gi|383334820|gb|EID13254.1| PAS domain-containing protein [Mycobacterium phlei RIVM601174]
Length = 1372
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D++++ + V LL Y V +V +Q +DA+ A D +++++V +P G
Sbjct: 619 RVLIADDNADMREYVVRLLRNDGYLVEAVTDGQQALDAVRARPPD--MVVSDVMMPGLDG 676
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
L+ + + D +PV+++SA+ + LR GA DYLVKP ELL
Sbjct: 677 LQFVTALRADPRTAAVPVLLLSARAGQEAAIDGLRAGADDYLVKPFAAAELL 728
>gi|254417391|ref|ZP_05031133.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175826|gb|EDX70848.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 684
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+ ++ +F++L Y+V V S +Q ++A+N + D LIL ++ +P G
Sbjct: 13 ILIVDDIPDNLRILFTMLANQGYEVRRVISGKQALNAVNTDPPD--LILLDIKMPEMDGY 70
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++ + + D++ IPVI +SA DEV VK +G DY+ KP + E++
Sbjct: 71 EVCQRLKADEKTAEIPVIFLSALDEVWDKVKAFEVGGVDYITKPFQLEEVI 121
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 20 SKSSGDG-FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
S SGD + +RILL +++ + LL + YQ V + ++V+DA++ + D
Sbjct: 547 SPESGDSPLAQQLPLRILLAEDNIVNQKVELLLLKRLGYQADLVSNGQEVLDAISRQSYD 606
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
+ IL +V +P GL +YI ++ QR +I ++A CL+ G DY+ KP
Sbjct: 607 V--ILMDVQMPEMDGLTATRYICQNYS-QRPWIIALTANAMQEDRETCLKAGMDDYISKP 663
Query: 139 LRTNELLNLWTHMWRRR 155
+R +L+ ++ + R+
Sbjct: 664 IRQADLIRVFKMIPLRQ 680
>gi|189468443|ref|ZP_03017228.1| hypothetical protein BACINT_04840 [Bacteroides intestinalis DSM
17393]
gi|189436707|gb|EDV05692.1| Sigma-54 interaction domain protein [Bacteroides intestinalis DSM
17393]
Length = 452
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ ++D + + L K +QV SV S + L EG+D LIL+++ LP G+
Sbjct: 4 ILIVEDDITYGMMLKTWLGKKGFQVASVSSIARAQKHLETEGAD--LILSDLRLPDKDGI 61
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+LK++ ++ IP+IMM++ ++ V+ ++LGA+DY+ KP+ +ELL
Sbjct: 62 DLLKWL--GEQGLSIPLIMMTSYADIQSAVQAMKLGASDYVAKPVNPDELL 110
>gi|423227730|ref|ZP_17214162.1| hypothetical protein HMPREF1062_06348 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392621946|gb|EIY16085.1| hypothetical protein HMPREF1062_06348 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 452
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ ++D + + L K +QV SV S + L EG+D LIL+++ LP G+
Sbjct: 4 ILIVEDDITYGMMLKTWLGKKGFQVASVSSIARAQKHLETEGAD--LILSDLRLPDKDGI 61
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+LK++ ++ IP+IMM++ ++ V+ ++LGA+DY+ KP+ +ELL
Sbjct: 62 DLLKWL--GEQGLSIPLIMMTSYADIQSAVQAMKLGASDYVAKPVNPDELL 110
>gi|331005211|ref|ZP_08328605.1| sigma-54 dependent DNA-binding response regulator FleR [gamma
proteobacterium IMCC1989]
gi|330420993|gb|EGG95265.1| sigma-54 dependent DNA-binding response regulator FleR [gamma
proteobacterium IMCC1989]
Length = 562
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 22/165 (13%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ ++D + +A+ L +Y V S ++ Q I+ L+ + DI ++++++++ + G
Sbjct: 39 KILVVEDDFSLREALEDTLSLANYSVVSAKNAEQAIELLSRQ-KDILMVVSDINMGVMSG 97
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+L+YIT ++ IP ++M+A V V +R GA DYLVKP EL+++
Sbjct: 98 HDLLQYIT--EQHAHIPALLMTAYGSVRDSVDAIRNGAVDYLVKPFEPKELVDIV----- 150
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSD----------ANTNSTTLF 188
R LG A +++ D +A DP A +NST L
Sbjct: 151 -HRQLGCA---VVNQDDLPIAEDPHSQQLLTLSSRVAQSNSTALI 191
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L +DS+ A+ + +++ S ++VT+V S ++ ++ L E ++ +I+ + +P G
Sbjct: 34 VLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLGTE-PNVSMIITDYWMPEMTGY 92
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
++LK + +L++IPV++MS+++ + + +CL GA D+LVKP+R +++ +++ + R
Sbjct: 93 ELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDFLVKPVRASDVSRVFSRVLR 151
>gi|428775129|ref|YP_007166916.1| CheA signal transduction histidine kinase [Halothece sp. PCC 7418]
gi|428689408|gb|AFZ42702.1| CheA signal transduction histidine kinase [Halothece sp. PCC 7418]
Length = 1026
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLV-KCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
ID+ + R LL +DS + S+++ K + V + + +D L +G+ +DLI+ ++
Sbjct: 901 IDKEQFRTLLVIDDSITERQTLSMIMQKAGHHVIQAKDGQDALDQLQ-QGAKVDLIVCDL 959
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++P GL+ + ++ EL +IPVI+++++ + LGA+DYL KP +LL
Sbjct: 960 EMPRMNGLEFIGATRQNPELSQIPVIVLTSRTRDKYQRIAMELGASDYLTKPYLDQDLL 1018
>gi|81300624|ref|YP_400832.1| response regulator receiver domain-containing protein
[Synechococcus elongatus PCC 7942]
gi|81169505|gb|ABB57845.1| response regulator receiver domain protein (CheY-like)
[Synechococcus elongatus PCC 7942]
Length = 411
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ +++ + D + L + + V V S ++ ++ L + DL+ +V +P G
Sbjct: 174 RLLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQLAQQP--FDLLFLDVMMPGLTG 231
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D L +PV+M+SA D++ V++CLRLGA DYL KP
Sbjct: 232 FEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYLTKPF 277
>gi|339715535|gb|AEJ88044.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715537|gb|AEJ88045.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715539|gb|AEJ88046.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715541|gb|AEJ88047.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715543|gb|AEJ88048.1| Ppd-D1 [Aegilops tauschii subsp. strangulata]
gi|339715545|gb|AEJ88049.1| Ppd-D1 [Aegilops tauschii subsp. strangulata]
gi|339715547|gb|AEJ88050.1| Ppd-D1 [Aegilops tauschii subsp. tauschii]
gi|339715549|gb|AEJ88051.1| Ppd-D1 [Aegilops tauschii]
gi|339715551|gb|AEJ88052.1| Ppd-D1 [Aegilops tauschii subsp. strangulata]
Length = 59
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 467 KVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 512
K +RR AA+ KFR+KRKER F KK+RY +RKRLAE+RPRVRGQFVR
Sbjct: 4 KRERRVAAVNKFREKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 49
>gi|310780088|ref|YP_003968420.1| response regulator receiver sensor signal transduction histidine
kinase [Ilyobacter polytropus DSM 2926]
gi|309749411|gb|ADO84072.1| response regulator receiver sensor signal transduction histidine
kinase [Ilyobacter polytropus DSM 2926]
Length = 541
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 72/112 (64%), Gaps = 6/112 (5%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL D+D N++ + +L K Y+V + + ++ ++ +N + ID+++A++++P+ G+
Sbjct: 133 ILLVDDDKNATKRLSRILTKEGYEVFTANNGKEGLEIIN--NNKIDILIADIEMPVMGGI 190
Query: 95 KMLKYITRDKELQR-IPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++L+ R K+ Q+ I VIMM+ + S+ + LR GA +YL KP+ +E+L
Sbjct: 191 ELLE---RVKKFQKDIEVIMMTGFGDESLAIDALRKGAINYLRKPIDLDEVL 239
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 79 IDLILAEVDLPMTKGLKMLKYI-TRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
ID+IL ++ +P GL MLK + ++ ++ I + S+QD+ +K LR GA DYL K
Sbjct: 47 IDIILLDIFMPDIDGLDMLKKVKSKWPSVEVIIITGYSSQDKA---IKALRRGAIDYLEK 103
Query: 138 PLRTNEL 144
P+ EL
Sbjct: 104 PINYEEL 110
>gi|95928935|ref|ZP_01311680.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfuromonas acetoxidans DSM 684]
gi|95134836|gb|EAT16490.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfuromonas acetoxidans DSM 684]
Length = 462
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+LL DN+ + ++L YQV S + ++ AE DL+++++ +P G
Sbjct: 6 RVLLIDNEEGLCRMMEAVLKDSGYQVKSYTRSFEAVEDFEAE--TYDLVISDIKMPGMDG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
L++L+ I R K+ QR+PVIM++A V ++ LR GA D L KP ELL
Sbjct: 64 LEVLQKI-RSKD-QRVPVIMITAYATVETSIQALRKGAYDMLTKPFEPEELL 113
>gi|445499225|ref|ZP_21466080.1| signal transduction response regulator [Janthinobacterium sp. HH01]
gi|444789220|gb|ELX10768.1| signal transduction response regulator [Janthinobacterium sp. HH01]
Length = 121
Score = 65.1 bits (157), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+ + +LVK + V++ + + + + A+ LIL +V +P G
Sbjct: 5 RILIVDDSPTERYYLTDILVKNGFTVSTAENGEEALAKIKADKPQ--LILMDVVMPGANG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++ + I RD ELQ +PVI+ S++++ + + LR GA DYLVKP+ ELL
Sbjct: 63 FQVTRSIARDPELQDVPVIICSSKNQETDRIWGLRQGARDYLVKPVDAAELL 114
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 33/232 (14%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS------------- 77
S+ +L D+ + LL SYQVT+V S + ++ L +
Sbjct: 8 SRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEI 67
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D++LI+ + +P G +LK + L+ IPV++MS+++ + + +CL+ GA ++ +K
Sbjct: 68 DVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLK 127
Query: 138 PLRTNELLNLWTHMWRRR----------RMLGLAEKNIL------SYDFDLVASDPSDAN 181
P++ ++ L +H+ +R+ + + L + L ++D + A++P A
Sbjct: 128 PVKLADMKKLKSHLLKRKQPKEAQAQQGQAVELEPEQQLDPRAQPAHDAEETAAEPPPAA 187
Query: 182 TNSTTLFSDDTDDKSRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVE 233
+N T D +K + + E GM + +T +++TS + AVE
Sbjct: 188 SNGTA----DGGNKRKAAAMEEEGMLAVMTVAAPESSTKPRLSTTSNSLAVE 235
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 26 GFIDRSK-VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
G+ D K +R+LL + D+NS+ + + L Y V++ + + + A+++ + +
Sbjct: 10 GWKDFPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIV 69
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV + G K++ K+L P IM S ++ ++KC+ LGA ++L KPL ++L
Sbjct: 70 EVSISCPDG--GFKFLENAKDL---PTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKL 124
Query: 145 LNLWTHM 151
N+W H+
Sbjct: 125 KNIWQHV 131
>gi|320107724|ref|YP_004183314.1| Fis family two component sigma54 specific transcriptional regulator
[Terriglobus saanensis SP1PR4]
gi|319926245|gb|ADV83320.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Terriglobus saanensis SP1PR4]
Length = 472
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 30/277 (10%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D+ +A+ LL Y++ V++P +VI+AL++E D LI + T G
Sbjct: 25 RLLVADDQPQILEALRLLLKPEGYELEMVKTPARVIEALSSETFDGVLIDLNYTMDTTSG 84
Query: 94 LKMLKYITRDKEL-QRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW---- 148
+ L ++R K + ++P+++M+A + + V+ +RLGA D++ KP LLN+
Sbjct: 85 REGLDLLSRIKAIDAQLPIVVMTAWGNIDLAVEAVRLGAGDFIQKPWENARLLNVLRTQM 144
Query: 149 -THMWRRRRMLGLAEKNILSY--DFDLVASDPS----------DANTNSTTLFSDDTDDK 195
H ++R AE IL + +++AS PS +N+ L + +
Sbjct: 145 ELHRSQKRSQWLEAENRILRAQGEHEMIASAPSMRPVLELMARIGPSNANVLITGE---- 200
Query: 196 SRRSTNPEIGMSTHQETESVPVATATVVASTSGTAAVEPIDASECGPDVPG-ISDRRTAG 254
T E+ T S A +VA +G A E + SE V G +D R
Sbjct: 201 --HGTGKEVVAQTLHRLSS--RADRPIVAVNTG-ALSEGVFESELFGHVKGAFTDARVDR 255
Query: 255 PKKIELRIGESSAFFTYVKSNMPRDSSPRIVNVDDSA 291
+ EL G S F +N+P +++ V ++
Sbjct: 256 IGRFELASG--STLFLDEIANIPMRQQAKLLRVLETG 290
>gi|293605362|ref|ZP_06687745.1| sensor histidine kinase/response regulator [Achromobacter piechaudii
ATCC 43553]
gi|292816234|gb|EFF75332.1| sensor histidine kinase/response regulator [Achromobacter piechaudii
ATCC 43553]
Length = 1116
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLPM 90
+L+ ++D + A+ S+L +V R+ R+ +DAL G + IDL+L ++ +P
Sbjct: 993 VLVVEDDVRNVFALSSILEPTGLRVEIARNGREALDALERAGGEGVPAIDLVLMDIMMPE 1052
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G +++I E +R+P+I ++A+ KCL GA DY+ KPL LL+L
Sbjct: 1053 MDGYTAMRHIRNRPEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVERLLSL-VR 1111
Query: 151 MWRR 154
+W R
Sbjct: 1112 VWMR 1115
>gi|162451922|ref|YP_001614289.1| hypothetical protein sce3649 [Sorangium cellulosum So ce56]
gi|161162504|emb|CAN93809.1| unnamed protein product [Sorangium cellulosum So ce56]
Length = 1029
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K ++LL D D S + L K Y VT+ + + L E S DL+L++ LP
Sbjct: 2 AKQQLLLVDADPRSVRVLEVSLKKAGYSVTTAKDGADALAKL--EVSTPDLVLSDTRLPN 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G +++ + + IPV+ +++Q + ++ L LG DYL KP+ EL+ T
Sbjct: 60 VDGYALVRKMKEHADWASIPVVFLTSQRSIEDKIRGLELGVEDYLTKPIFVRELIARVTL 119
Query: 151 MWRRRRMLGLAEKNI 165
+ RR G+ ++
Sbjct: 120 LLARRTREGITTRHF 134
>gi|167762134|ref|ZP_02434261.1| hypothetical protein BACSTE_00486 [Bacteroides stercoris ATCC
43183]
gi|167699777|gb|EDS16356.1| response regulator receiver domain protein [Bacteroides stercoris
ATCC 43183]
Length = 119
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D + V + + Y + SP + ++ LN EG+ DLI++++ +P +G
Sbjct: 3 KILLVD-DKATIGRVLKIYLGTEYDLEYFESPLKALEWLN-EGNVPDLIISDIHMPHMRG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ + IPV+M+S+++ ++ L GAADY++KP EL
Sbjct: 61 NEFLYYLKGNELFKHIPVVMLSSEESTVERIQLLEAGAADYILKPFNPLEL 111
>gi|325267975|ref|ZP_08134623.1| two component response regulator [Kingella denitrificans ATCC
33394]
gi|324980578|gb|EGC16242.1| two component response regulator [Kingella denitrificans ATCC
33394]
Length = 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 27 FIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEV 86
F+ +RILL ++D + AV L +Y V V+ AL G + DL+L ++
Sbjct: 7 FLGNMSMRILLVEDDGMIAQAVMMGLKHANYAVDWVQDGLAAQTAL--AGQNYDLVLLDL 64
Query: 87 DLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
LP GL ML++I +++ L PV++++AQD++ + L GA DY+VKP ELL
Sbjct: 65 GLPKQDGLSMLRHIRQNRNLT--PVLIVTAQDDLDSRLSGLDGGADDYVVKPFDMAELL 121
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
SKV IL+ D+D + ++L K ++ VT V + + D L DL+L +V +PM
Sbjct: 166 SKVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTLLNGKVMYDLVLTDVMMPM 225
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQD-EVSVVVKCLRLGAADYLVKPLRTNELL---- 145
G +L+ I E++ IPVI+MS + +++G D+L KP+ ELL
Sbjct: 226 VTGFDLLQRINEHIEIKHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPI-AKELLKKKI 284
Query: 146 -NLWTHMWRRRR 156
+ T +W++++
Sbjct: 285 DTVLTSIWQKKK 296
>gi|427387467|ref|ZP_18883523.1| hypothetical protein HMPREF9447_04556 [Bacteroides oleiciplenus YIT
12058]
gi|425725421|gb|EKU88293.1| hypothetical protein HMPREF9447_04556 [Bacteroides oleiciplenus YIT
12058]
Length = 452
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ ++D + + L K +QVTS S + L EG+D LIL+++ LP G+
Sbjct: 4 ILIVEDDITYGMMLKTWLSKKGFQVTSASSIARAQKHLETEGAD--LILSDLRLPDKDGI 61
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+LK++ + IP+IMM++ ++ V+ ++LGA+DY+ KP+ +ELL
Sbjct: 62 DLLKWL--GIQGMSIPLIMMTSYADIQSAVQAMKLGASDYVAKPVNPDELL 110
>gi|209547395|ref|YP_002279313.1| GAF sensor hybrid histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424917543|ref|ZP_18340907.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209538639|gb|ACI58573.1| GAF sensor hybrid histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392853719|gb|EJB06240.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 2099
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINNEPS-VAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
Score = 39.3 bits (90), Expect = 5.5, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1808 MSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDITSVGSGSE 1867
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+ AL + D ++ ++ LP G +L+ I D E+ +PV++ + ++ L
Sbjct: 1868 ALAALRQDPPDC--VVLDLSLPDMSGFDVLEQIRDDAEIGEVPVVVFTGRELSPEEDATL 1925
Query: 128 RLGAADYLVKPLRTNELLNLWTHMWRRRRM--LGLAEKNIL----SYDFDLVASDPSDAN 181
A +VK + + E L T ++ R + L LA++ L S D DLV +
Sbjct: 1926 HSMARSVVVKGVESPERLLDETALFLHRVVADLPLAKQATLQELHSSDEDLVGETVLLVD 1985
Query: 182 TNSTTLFS 189
++ +F+
Sbjct: 1986 DDARNIFA 1993
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 6/127 (4%)
Query: 26 GFIDRSK-VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
G+ D K +R+LL + D+NS+ + + L Y V++ + + + A+++ + +
Sbjct: 10 GWKDFPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIV 69
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV + G K++ K+L P IM S ++ ++KC+ LGA ++L KPL ++L
Sbjct: 70 EVSISCPDG--GFKFLENAKDL---PTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKL 124
Query: 145 LNLWTHM 151
N+W H+
Sbjct: 125 KNIWQHV 131
>gi|424890154|ref|ZP_18313753.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393172372|gb|EJC72417.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 2098
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E S + ++L ++ +P G
Sbjct: 1980 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVINNEPS-VAIVLMDIMMPGMDGY 2038
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2039 ETMQVIRSEPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2097
>gi|86143810|ref|ZP_01062186.1| rteB, two-component system response regulator [Leeuwenhoekiella
blandensis MED217]
gi|85829853|gb|EAQ48315.1| rteB, two-component system response regulator [Leeuwenhoekiella
blandensis MED217]
Length = 451
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL ++D + + L K Y+V S + + L +DL++ +V LP G
Sbjct: 3 KILLIEDDVAFCKMLETFLSKKGYEVISAFAAGEAYKILANHA--VDLVITDVRLPDDDG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
L +LK+I D IPVI+M+ EV+ V+ ++ GA DY+ KP+R +ELL +
Sbjct: 61 LSILKHIKED--YNNIPVILMTGYAEVNKAVEAMKEGAFDYISKPVRPDELLKI 112
>gi|237719372|ref|ZP_04549853.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229451232|gb|EEO57023.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 121
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D ++ V + ++ Y T + P + I+ LN EG+ DLI++++ +P+
Sbjct: 2 KKKILLVD-DKSTIGKVAGVYLEKEYDFTYLEDPIKAIEWLN-EGNVPDLIISDIRMPLM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + L+Y+ ++ + IP++M+S+++ + ++ L GA DY++KP EL
Sbjct: 60 MGDEFLRYMKNNELFKSIPIVMLSSEESTTERIRLLEEGAEDYILKPFNPLEL 112
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+++ D+D + +L +CS +VT+ S R V+ L D+++++V +P
Sbjct: 17 LRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLRENRYGYDIVISDVIMPGMD 76
Query: 93 GLKMLKYITR---DKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
L +I + L R VI S E S V++ ++LGA +YL+KP+R EL N+
Sbjct: 77 VFLHLLFIGSMLLTEHLYRFTVI--SVDGERSRVMRGIQLGACEYLLKPIRMKELRNICQ 134
Query: 150 HMWRRR 155
H++RR+
Sbjct: 135 HVFRRK 140
>gi|395219658|ref|ZP_10402524.1| signal transduction histidine kinase [Pontibacter sp. BAB1700]
gi|394453871|gb|EJF08669.1| signal transduction histidine kinase [Pontibacter sp. BAB1700]
Length = 995
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+D + ++ SLL QV + R+ ++ L+ E S ID++L +V +P G
Sbjct: 875 KILVVDDDVRNIYSLSSLLEMHGMQVIAAYDGREALEKLDTE-SGIDMVLMDVMMPEMDG 933
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
++ K I +D +++P+I ++A+ KC+ GA+DY+ KP+ T++LL L +W
Sbjct: 934 IEATKRIRKDLRFKQLPIISLTAKAMKEDREKCIEAGASDYIPKPVDTDKLLTLM-RVW 991
>gi|291520971|emb|CBK79264.1| diguanylate cyclase (GGDEF) domain [Coprococcus catus GD/7]
Length = 646
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 29 DRSKVR-ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
DR K+R ++L +DS + + S ++K +++ + R+ +DAL G I L+L +++
Sbjct: 302 DREKIRQLILIVDDSELNRTLLSEMLKDDFRILEASNGRECLDALEQYGMGISLVLLDIN 361
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTN----E 143
+P+ G ++L + R+ ++ IPV+M+S+ D S + + +G +DY+ +P
Sbjct: 362 MPVMDGFEVLVQMNRNHWIEDIPVVMISSDDTESNIKRAYDMGVSDYIRRPFDAQVVFRR 421
Query: 144 LLNLWTHMWRRRRMLGLAEKNI 165
+ N ++RR++ L I
Sbjct: 422 VFNTIKLYAKQRRLITLVTDQI 443
>gi|251795843|ref|YP_003010574.1| GAF sensor hybrid histidine kinase [Paenibacillus sp. JDR-2]
gi|247543469|gb|ACT00488.1| GAF sensor hybrid histidine kinase [Paenibacillus sp. JDR-2]
Length = 890
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL ++D+ + A+ + L QVT + R +D L + D DL+L ++ +P+ G
Sbjct: 767 KVLLVEDDARNVFALVNALENKKMQVTVAGNGRACMDLLK-DNKDFDLVLMDIMMPLMDG 825
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ + + ELQ +P+I ++A+ S KCL GA+DY+ KPL+ ++L +L +W
Sbjct: 826 YETMREMRKQPELQAMPIIALTAKAMKSDRDKCLEAGASDYISKPLQMDQLYSL-MQVWL 884
Query: 154 RRRM 157
+++
Sbjct: 885 TKQV 888
>gi|61611682|gb|AAX47173.1| CONSTANS-LIKE b [Pisum sativum]
Length = 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 451 SWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 510
S+ YG + + V++ DR EA ++++R+KRK R F+K IRY +RK AE RPR++G+F
Sbjct: 228 SYCGYGRTEA--VQITAADR-EARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRF 284
Query: 511 VRKVN-GVNVDLNGQPSSVD 529
++ + +NV+L G+ S D
Sbjct: 285 AKRTDLNMNVNLIGEDESYD 304
>gi|60459257|gb|AAX20015.1| CONSTANS-like b [Pisum sativum]
Length = 312
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 451 SWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 510
S+ YG + + V++ DR EA ++++R+KRK R F+K IRY +RK AE RPR++G+F
Sbjct: 228 SYCGYGRTEA--VQITAADR-EARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRF 284
Query: 511 VRKVN-GVNVDLNGQPSSVD 529
++ + +NV+L G+ S D
Sbjct: 285 AKRTDLNMNVNLIGEDESYD 304
>gi|162451119|ref|YP_001613486.1| response regulator/GGDEF domain-containing protein [Sorangium
cellulosum So ce56]
gi|161161701|emb|CAN93006.1| response regulator/GGDEF domain protein [Sorangium cellulosum So
ce56]
Length = 391
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RI++ D+D + + S+L K +QV +V ++ I+ + G +DL+L ++ +P G
Sbjct: 25 RIVVADDDRLARQMLVSILQKAGFQVEAVDDGQEAIELIGRGG--VDLVLLDIVMPRLTG 82
Query: 94 L---KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
L ++LK +T + L PV++++ + + + V+ L++GA DY+ KP ELL
Sbjct: 83 LEACRLLKSMTSESFL---PVVLVTVKSDTANRVEGLKIGADDYVCKPFEEEELLARVGA 139
Query: 151 MWRRRRM 157
M R +R+
Sbjct: 140 MLRIKRL 146
>gi|331268264|ref|YP_004394756.1| winged helix family two component transcriptional regulator
[Clostridium botulinum BKT015925]
gi|329124814|gb|AEB74759.1| two component transcriptional regulator, winged helix family
[Clostridium botulinum BKT015925]
Length = 216
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ ++D D + L Y+V + + + E DIDL+L +V LP G
Sbjct: 2 RILVVEDDLAIGDLIEINLQMSGYEVLKAIDGEEAKEVFDKE--DIDLVLLDVMLPKIDG 59
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+++KYI + + IPVI ++A++ V VK LRLGA DY+VKP ELL
Sbjct: 60 FQLIKYIKK----KDIPVIFLTAKNSVIDKVKGLRLGADDYIVKPFENIELL 107
>gi|375143327|ref|YP_005003976.1| PAS domain-containing protein [Mycobacterium rhodesiae NBB3]
gi|359823948|gb|AEV76761.1| PAS domain S-box [Mycobacterium rhodesiae NBB3]
Length = 1378
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 16 GIGNS---KSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL 72
G+G++ G DR + R+L+ D++++ D + LL Y+V +V +Q +D++
Sbjct: 606 GVGDAPEPHVEGAAGSDR-RTRVLIADDNADMRDYLGRLLGSDGYEVEAVTDGQQALDSV 664
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
A DI ++++V +P GL+++ + D +PV+++SA+ + L+ GA
Sbjct: 665 RATLPDI--VVSDVMMPRLDGLELVAALRSDPRTAAVPVLLLSARAGQEASIGGLQAGAD 722
Query: 133 DYLVKPLRTNELLNLWTHMWRRRRMLGLA 161
DYL KP ELL R R +GLA
Sbjct: 723 DYLTKPFAAAELLA------RVRATVGLA 745
>gi|334364661|ref|ZP_08513641.1| response regulator receiver domain protein [Alistipes sp. HGB5]
gi|390946570|ref|YP_006410330.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Alistipes finegoldii DSM 17242]
gi|313159037|gb|EFR58412.1| response regulator receiver domain protein [Alistipes sp. HGB5]
gi|390423139|gb|AFL77645.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Alistipes finegoldii DSM 17242]
Length = 122
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K +IL+ D+ + +++ L + Y V++P I L A G DLI++++ +P
Sbjct: 2 NKKQILIVDDKEQIAKILYAYL-QADYDCHYVQNPLHAIKRLLA-GHMPDLIISDIRMPE 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+G + L+Y+ ++ ++IPV+M+S++D S ++ L GA DY+VKP EL
Sbjct: 60 MRGDEFLEYLKHNELFKQIPVVMLSSEDSTSERIRLLEEGAEDYIVKPFNPQEL 113
>gi|402825977|ref|ZP_10875219.1| multi-sensor hybrid histidine kinase [Sphingomonas sp. LH128]
gi|402260533|gb|EJU10654.1| multi-sensor hybrid histidine kinase [Sphingomonas sp. LH128]
Length = 1143
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLP 89
RIL+ ++D + ++ S+L V R+ ++ IDAL G D +DL+L +V +P
Sbjct: 1019 RILIVEDDVRNVYSLSSVLEPRGAIVQIARNGQEAIDALAQAGDDPKKAVDLVLMDVMMP 1078
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
+ GL + I D ++P++M++AQ +CL GA DY+ KP+ ++LL+L
Sbjct: 1079 VMDGLTATRAIRADARWAKLPIVMLTAQAMPDDQQRCLEAGANDYMAKPIDVDKLLSL-V 1137
Query: 150 HMW 152
+W
Sbjct: 1138 RVW 1140
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 34 RILLCDNDSNSSDAVFSLLV-----KCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
R+LL D DAVF+ +V + +Q + I +A I+ ++ L
Sbjct: 750 RVLLVIED----DAVFAQIVCELSRELGFQCVIAGNAEDAIK--HAHEFKPSAIVLDLGL 803
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW 148
P GL +L + D E + IP+ ++SA D+ L LGA Y +KP++ EL +
Sbjct: 804 PDQSGLTVLDRLKHDDETRHIPIHVISAADQSQT---ALSLGAVGYHIKPVKREELAQVL 860
Query: 149 THMW-----RRRRML 158
+ R RR+L
Sbjct: 861 EGLQAKLSSRMRRVL 875
>gi|410632213|ref|ZP_11342877.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
gi|410148213|dbj|GAC19744.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
Length = 463
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K IL+ D+DS A+ LL +YQVT+V SP++ +D L + + L+ T
Sbjct: 2 KHSILIADDDSRILTALKLLLKGENYQVTAVTSPKECLDTLQKDHYSLALVDLNYHADTT 61
Query: 92 KGLKMLKYITRDKEL-QRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G + L+ I K+L +++PV++M+ + V V+ ++LGA D++ KP + LL++
Sbjct: 62 SGDEGLQLIAAIKQLDEQLPVVVMTGYSSIEVAVEAMKLGAVDFVQKPWGNDRLLSIIQA 121
Query: 151 MWR----RRRMLGLAEKNILSYD 169
R + + + LA++N L D
Sbjct: 122 QIRIGDMQHQGIKLAQENALLRD 144
>gi|27377399|ref|NP_768928.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
gi|27350543|dbj|BAC47553.1| two-component hybrid sensor and regulator [Bradyrhizobium japonicum
USDA 110]
Length = 527
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+ + D + L + ++V+SV +Q + AL + + DL+L ++ +P GL
Sbjct: 185 ILVVDDIEANRDLLSRRLTRDGHRVSSVAGGQQALQALAND--EFDLVLLDLMMPDINGL 242
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+L + D+ L+RIPVIM++A E V+C+ GA DYL KP
Sbjct: 243 DVLVRMKADERLRRIPVIMITALAETESAVRCIEAGAEDYLPKPF 287
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L +DS AV S L++ S Y+VT+V S ++ ++ L+ + S + +I+ + +P G
Sbjct: 13 VLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDDS-VHMIITDYCMPEMSGY 71
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
++LK + EL+ IPV++MS+++ + + +CL GA ++L+KP+R +++ L + +
Sbjct: 72 ELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEFLIKPVRASDVSRLCSRL 128
>gi|298208869|ref|YP_003717048.1| Response regulator receiver domain-containing protein (CheY)
[Croceibacter atlanticus HTCC2559]
gi|83848796|gb|EAP86665.1| Response regulator receiver domain protein (CheY) [Croceibacter
atlanticus HTCC2559]
Length = 137
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 52/84 (61%)
Query: 57 YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSA 116
Y++ ++ Q +D LN G DLIL ++++P GL+ L+ + D+ L+ IP I+++
Sbjct: 31 YKIQEAKNGEQALDILNKGGELPDLILLDLNMPKINGLEFLRILKDDERLKYIPTIVLTT 90
Query: 117 QDEVSVVVKCLRLGAADYLVKPLR 140
+ V++C R+G A Y++KPL+
Sbjct: 91 SNNRKDVLECYRIGIAGYILKPLK 114
>gi|398899702|ref|ZP_10649161.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM50]
gi|398182271|gb|EJM69793.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Pseudomonas sp. GM50]
Length = 461
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+++LL ++D +A+ L+ + T+V S + ++A+ AE L+L++V++P
Sbjct: 3 IKVLLVEDDRALREALADTLLLAGHDYTAVGSAEEALEAVGAEA--FSLVLSDVNMPGMD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
G ++L + R ++ Q +PV++M+A V V +R GA+DYLVKP LL+L
Sbjct: 61 GHQLLGLL-RARQPQ-LPVLLMTAHGAVERAVDAMRQGASDYLVKPFEPKALLDL 113
>gi|392413332|ref|YP_006449939.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfomonile tiedjei DSM 6799]
gi|390626468|gb|AFM27675.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfomonile tiedjei DSM 6799]
Length = 230
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D++ + + V L K YQVTS S + E D L+L ++ LP G
Sbjct: 5 KVLVVDDEEDILELVRYNLSKDGYQVTSALSGETALKKAKEESPD--LVLLDLMLPGVDG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L + K + RD IP++M++A+ E + VV L LGA DY+ KP LL + R
Sbjct: 63 LDVCKELKRDPATAAIPIVMLTAKGEDADVVTGLELGADDYITKPFSPRVLLARIKAVLR 122
Query: 154 RRRMLGLAEKNILSYDFDLVASDPS 178
RR+ +E +L DLV DP+
Sbjct: 123 RRKQHQASEDTVLRI-HDLVI-DPT 145
>gi|348170666|ref|ZP_08877560.1| response regulator, two-component system [Saccharopolyspora spinosa
NRRL 18395]
Length = 218
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL ++D ++A+ +L ++ T V DAL + DL+L ++ LP
Sbjct: 1 MRVLLVEDDDGVANALVEVLAAHGHRPTRVSRG---ADALTRH-REHDLVLLDLGLPDAD 56
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +L+ + R + IPV++++A+ E +VV+ LR GA DYLVKP+R ELL +
Sbjct: 57 GLDVLRKLRR---IGPIPVVVLTARGEERMVVRGLRSGADDYLVKPVRMAELLARIEAVA 113
Query: 153 RRRRMLG 159
RR R+ G
Sbjct: 114 RRGRLPG 120
>gi|253577994|ref|ZP_04855266.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850312|gb|EES78270.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 659
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 19 NSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
+ K + D R+++++L+ D DS + + ++ Y++ + + L G +
Sbjct: 287 DQKKNTDEMEKRNRLQLLVVD-DSEMNREILKEILGKEYRILEACDGEEALKILEQYGPE 345
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
I L+L ++ +P G ++L Y+ RDK ++ IPVIM+S++ S + + LGA+DY+ +P
Sbjct: 346 ISLVLLDIIMPKMDGFEVLAYMNRDKWIEDIPVIMISSEGSESYIRRAYELGASDYISRP 405
Query: 139 LRT----NELLNLWTHMWRRRRMLGLAEKNI 165
++N+ ++RR++ L I
Sbjct: 406 FDAKVVYQRVINMIKLYAKQRRLIHLVTDQI 436
>gi|406876743|gb|EKD26204.1| response regulator receiver sensor signal transduction histidine
kinase [uncultured bacterium]
Length = 405
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V+ILL D+ V LL +Y+V + +++++ L++ G+ D+I+ + ++P+
Sbjct: 12 VKILLADDSKMILSFVSKLLTGKNYEVGLFENGQELLNYLSS-GNSGDIIILDNEMPVKD 70
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G+ LK + ++ L++IPVI +SA + VV+ L+LGA DY+VKP +E
Sbjct: 71 GMSTLKELKSNEILKKIPVIFLSAITDKEKVVEALQLGADDYIVKPFNNDEFF 123
>gi|294674076|ref|YP_003574692.1| response regulator PhoB [Prevotella ruminicola 23]
gi|294472329|gb|ADE81718.1| response regulator PhoB [Prevotella ruminicola 23]
Length = 121
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +IL+ D D + V S+ + Y V + Q + L A G+ DLI++++ +P
Sbjct: 2 KKKILILD-DKETIAKVLSIYLMSDYDVQWLPDGLQGVKWLQA-GNTPDLIISDIRMPGM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+G L++I +++ ++IPVIM+S++D S ++ L +GA DY+VKP EL
Sbjct: 60 RGDDFLEWIKQNELFKQIPVIMLSSEDSTSERIRLLEIGAEDYIVKPFNPMEL 112
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D + + + ++ + +YQV+ + + L + +I++++ + +P GL
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ LK IT +L PV++MS ++ V+K GA DY+VKP++ + N+W H+ R+
Sbjct: 96 QALKSITSKLDL---PVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 155 RRML 158
R +
Sbjct: 153 RLIF 156
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS--------DIDLIL 83
++ +L D+ V LL SY+VT+V S + ++ L GS I+LI+
Sbjct: 7 EIHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINAIKINLII 66
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
+ +P G +LK + L+ IPV++MS+++ + C+ GA ++++KPLR +
Sbjct: 67 TDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKEFILKPLRVAD 126
Query: 144 LLNLWTHMWR 153
+ L +H+ R
Sbjct: 127 VKRLRSHIQR 136
>gi|445494171|ref|ZP_21461215.1| multi-sensor hybrid histidine kinase [Janthinobacterium sp. HH01]
gi|444790332|gb|ELX11879.1| multi-sensor hybrid histidine kinase [Janthinobacterium sp. HH01]
Length = 1161
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILL D+D + A+ S L V R+ + I LN E SDIDL+L +V +P G
Sbjct: 1038 RILLVDDDVRNIFALTSALEHKGVLVEVGRNGFEAIAKLN-EVSDIDLVLMDVMMPGMDG 1096
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL---RTNELLNLW 148
L+ + I +D R+P+I ++A+ +CL GA+DYL KP+ R LL +W
Sbjct: 1097 LEATRRIRQDARYARLPIIAITAKAMKDDQEQCLAAGASDYLAKPIDLSRLYSLLRVW 1154
>gi|225026589|ref|ZP_03715781.1| hypothetical protein EUBHAL_00839 [Eubacterium hallii DSM 3353]
gi|224956081|gb|EEG37290.1| diguanylate cyclase (GGDEF) domain protein [Eubacterium hallii DSM
3353]
Length = 917
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 15/132 (11%)
Query: 57 YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSA 116
Y++ V + ++ ID L L+L ++++P+ G ++L + R K L ++PVI++SA
Sbjct: 4 YEIYQVENGKKAIDILEENREQFKLVLLDINMPVMDGYEVLSIMKRRKWLDKLPVIVISA 63
Query: 117 QDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDLVASD 176
+ V K LGA+DY V+P N+ + R R M+ L +D ++S+
Sbjct: 64 EISGESVKKAYELGASDYFVRP------FNVAIVLRRVRNMITL---------YDNISSN 108
Query: 177 PSDANTNSTTLF 188
DA T +T+F
Sbjct: 109 LKDAVTMLSTIF 120
>gi|118580418|ref|YP_901668.1| two component sigma54 specific Fis family transcriptional regulator
[Pelobacter propionicus DSM 2379]
gi|118503128|gb|ABK99610.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Pelobacter propionicus DSM 2379]
Length = 473
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSY-QVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
D + IL+ D++ + + SLL + ++ ++ R+V+ L E IDLI+ ++
Sbjct: 3 DGATFTILIVDDEQHILFSSESLLRFAGFREIRTLDDSRRVLSLLEKE--TIDLIVLDLF 60
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G ++L ++RD IPVI+M+A DEV + V C++ GA DYLVKP+ L++
Sbjct: 61 MPYVSGRELLTLLSRDYP--HIPVIVMTAADEVDIAVDCMKGGAFDYLVKPVENARLVS 117
>gi|421860219|ref|ZP_16292370.1| response regulator [Paenibacillus popilliae ATCC 14706]
gi|410830223|dbj|GAC42807.1| response regulator [Paenibacillus popilliae ATCC 14706]
Length = 167
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILL ++D N + L Y V S + AL A+ +DLIL +V+LP G
Sbjct: 3 RILLVEDDDNLVFGIEYTLTSEGYTVVLASSLEEARKALMADA--VDLILLDVNLPDGSG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ + I + ++P+I ++A DE + VV L LGA DY+ KP+RT ELL+ + R
Sbjct: 61 YALCREI---RVSSQVPIIFLTALDEEANVVAGLDLGADDYMTKPIRTKELLSRMKAVLR 117
Query: 154 R 154
R
Sbjct: 118 R 118
>gi|383453471|ref|YP_005367460.1| aerobic respiration control sensor protein [Corallococcus
coralloides DSM 2259]
gi|380732067|gb|AFE08069.1| aerobic respiration control sensor protein [Corallococcus
coralloides DSM 2259]
Length = 1020
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
++ RILL D++++ V LL V + R+ ++ ++ A DLIL++V +P+
Sbjct: 646 ARSRILLVDDNADLRAYVTGLLKHVFPHVEAARNGQEALE--QARVRPPDLILSDVMMPV 703
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G +++ + D+ + IP+I++SA+ V+ LR GA DYLVKP ELL
Sbjct: 704 LDGFGLVRELRADERTRAIPIILLSARAGDEATVEGLRSGADDYLVKPFSARELL 758
>gi|381166055|ref|ZP_09875273.1| Putative two component response transcriptional regulator (OmpR
family) [Phaeospirillum molischianum DSM 120]
gi|380684787|emb|CCG40085.1| Putative two component response transcriptional regulator (OmpR
family) [Phaeospirillum molischianum DSM 120]
Length = 245
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+D+ D V L YQVTSV + AL EG IDLI+ ++ LP GL
Sbjct: 4 ILVVDDDAEICDLVSQALSAQGYQVTSVGDGTAMRCAL--EGEVIDLIILDLMLPGEDGL 61
Query: 95 KMLKYITRDKELQRIPVIMMSAQD-EVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ +++ + P+IM++A E+ VV L +GA DYL KP T ELL + R
Sbjct: 62 SLCRHL---RATTATPIIMLTAMGSEIDRVVG-LEMGADDYLAKPFSTRELLARIRAVLR 117
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSDANTNSTT----LFSDDTDDKSRR 198
R F V ++P D NT T +FS T D RR
Sbjct: 118 RS-----------GPSFPTVPTNPQDVNTEGRTGEVFVFSGWTLDAKRR 155
>gi|342217210|ref|ZP_08709857.1| transcriptional regulatory protein, C-terminal domain protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588100|gb|EGS31500.1| transcriptional regulatory protein, C-terminal domain protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 217
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 19/168 (11%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ ++D N + + S+ +K Y+V SV + + + ++ D DLIL +++LP G
Sbjct: 3 KILIIEDDKNLNKGL-SIALKKDYEVFSVSTISEAKNFID----DADLILLDMNLPDGDG 57
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L+++KY TR + IP+I++SA D + ++ + LGA DYL KP L + +
Sbjct: 58 LEIIKY-TR--QTSSIPIIVLSAIDLEAYIISAINLGADDYLTKPFS----LGILEAKIK 110
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTD-DKSRRST 200
R A + I+S D +L D D N N T + D+ + D +R T
Sbjct: 111 R------AFEKIVSSDLNLYKKDGLDFNFNENTFYVDNKNIDLTRTET 152
>gi|424876115|ref|ZP_18299774.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393163718|gb|EJC63771.1| signal transduction histidine kinase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 2099
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID +N E + + ++L ++ +P G
Sbjct: 1981 VLLVDDDARNIFALSSVLERRGMKVLTATTGSEAIDVINNEPT-VAIVLMDIMMPGMDGY 2039
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I + +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2040 ETMQVIRSEPRFRRLPIVALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2098
Score = 38.9 bits (89), Expect = 7.1, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
++K + G+G + S + + +LL +++ +V +LL +TSV S +
Sbjct: 1808 MSKPTTPEGLGKALSRLKAYAQPRRKHLLLVEDNEAERLSVTALLGHDDIDITSVGSGSE 1867
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+ AL +D ++ ++ LP G +L+ + D E+ +PV++ + ++ + L
Sbjct: 1868 ALAALRQNSADC--VVLDLSLPDMSGFDVLEQMRDDAEIGEVPVVVFTGRELSAEEDAAL 1925
Query: 128 RLGAADYLVKPLRTNELL 145
A +VK + + E L
Sbjct: 1926 HSMARSVVVKGVESPERL 1943
>gi|153869727|ref|ZP_01999263.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
gi|152073808|gb|EDN70738.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
Length = 207
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+ + S+ + L ++V RS + + +N+ S DLIL +V +P G
Sbjct: 7 ILIVDDSAVSTTVLSHFLTLNDFKVLVERSGDEALQFMNSASSKPDLILLDVMMPGISGF 66
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTHMWR 153
+ K + ++ + Q IP+I M+A + +K LGA DY+ KP + E+L + TH+
Sbjct: 67 ETCKELKQNTKTQEIPIIFMTALSDTGDKIKAFELGAVDYVTKPFQQEEVLARINTHLTL 126
Query: 154 RRRMLGLAEKN 164
R L KN
Sbjct: 127 CRLQQQLVTKN 137
>gi|434392842|ref|YP_007127789.1| multi-sensor hybrid histidine kinase [Gloeocapsa sp. PCC 7428]
gi|428264683|gb|AFZ30629.1| multi-sensor hybrid histidine kinase [Gloeocapsa sp. PCC 7428]
Length = 1608
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 19 NSKSSGDGFIDRS--KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEG 76
+S S F+D S RILL D++++ D + LL + Y+V +V R + A+
Sbjct: 620 DSLSVPAAFMDSSIATARILLADDNADMRDYLKRLLSQ-QYEVEAVADGRAALTAIRQRI 678
Query: 77 SDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLV 136
D L+L++V +P G ++L+ + D Q IP+I++SA+ ++ L+ GA DYL+
Sbjct: 679 PD--LVLSDVMMPNLDGFELLRSLRSDPTTQEIPLILLSARAGEEARIEGLQAGADDYLI 736
Query: 137 KPLRTNELL 145
KP ELL
Sbjct: 737 KPFSARELL 745
>gi|427738854|ref|YP_007058398.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
gi|427373895|gb|AFY57851.1| signal transduction histidine kinase [Rivularia sp. PCC 7116]
Length = 1146
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
SK IL+ D++ + + + L Y+VT + R+ ++ ++ E IDLIL ++ +P
Sbjct: 733 SKYHILIVDDEPVNLQVLNNHLSLHKYRVTQALNGREALNIVDKE-EKIDLILLDIMMPK 791
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++ + ++PVIM++A+++V+ +V + GA DYL KP +ELL
Sbjct: 792 MSGYEVCAALREKYPAHQLPVIMLTAKNQVTDIVTGFKFGANDYLTKPFHKDELL 846
>gi|413918802|gb|AFW58734.1| hypothetical protein ZEAMMB73_093452 [Zea mays]
Length = 323
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
G +P V ++R EA L+++R+KRK R FDK IRY +RK AE RPR++G+F ++
Sbjct: 222 GAAPEVAVVCRGLER-EARLMRYREKRKSRRFDKTIRYASRKAYAETRPRIKGRFAKRTP 280
Query: 516 GVNVD 520
G D
Sbjct: 281 GAGAD 285
>gi|374603931|ref|ZP_09676904.1| signal transduction histidine kinase [Paenibacillus dendritiformis
C454]
gi|374390481|gb|EHQ61830.1| signal transduction histidine kinase [Paenibacillus dendritiformis
C454]
Length = 1129
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 13 SGAGIGNSKSSGDGFIDR--SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVID 70
SG +++SG D+ + RILL D+D + A+ S+L + + + R+ I+
Sbjct: 986 SGEEEAGARASGHASNDQLLAGKRILLVDDDVRNVFALSSVLEQYDMDIVYAENGREAIE 1045
Query: 71 ALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLG 130
AL + DL+L ++ +P G + ++ I +++P+I ++A+ KC+ G
Sbjct: 1046 ALTGDPEHFDLVLMDMMMPEMDGYEAMRLIREMPAFEKLPIIALTAKAMKEDRNKCIEAG 1105
Query: 131 AADYLVKPLRTNELLNL---WTH 150
A+DY+ KP +T +LL+L W +
Sbjct: 1106 ASDYVSKPFQTEQLLSLMRVWLY 1128
>gi|333920031|ref|YP_004493612.1| putative OmpR family two-component response regulator
[Amycolicicoccus subflavus DQS3-9A1]
gi|333482252|gb|AEF40812.1| Putative OmpR family two-component response regulator
[Amycolicicoccus subflavus DQS3-9A1]
Length = 219
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+ + ++D DA+ L S+ T ++ ++ L+ +G D +L ++ LP
Sbjct: 1 MRVAVVEDDDGVGDALVDALTARSHNATRMQRGEDLL--LHHKG--FDAVLLDLGLPDAD 56
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +L+ + + + +PVI+++A+D+ VV+ LR+GA DYLVKP R NEL+ +
Sbjct: 57 GLVILRNL---RAVSDVPVIILTARDDERSVVRGLRIGADDYLVKPPRLNELVARLEVVT 113
Query: 153 RRRR 156
RRRR
Sbjct: 114 RRRR 117
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
VRIL+ ++D V +L Y+VT+ + L + +I+LIL E LP
Sbjct: 23 VRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILIETHLPDMD 82
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
++++ + +P+++ SA + VS ++ L GAA YL+KP+ N++ NLW +
Sbjct: 83 QYEIIETVRAMSS--SLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKNLWQLTY 140
Query: 153 RRRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFS 189
R+++ ++ S+ L + S +L S
Sbjct: 141 RKKKKTAVSSVGSNSFHAGLAEENASSVTAGIPSLLS 177
>gi|291435241|ref|ZP_06574631.1| PAS/PAC sensor hybrid histidine kinase [Streptomyces ghanaensis
ATCC 14672]
gi|291338136|gb|EFE65092.1| PAS/PAC sensor hybrid histidine kinase [Streptomyces ghanaensis
ATCC 14672]
Length = 1385
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D++++ + + LL YQV +V+ + A+ A D L++++V +P G
Sbjct: 637 RLLVADDNADMREYLARLLHSAGYQVDTVKDGLAALQAVRAHAPD--LVISDVMMPGLDG 694
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
L ++ + D +PV+++SA+ ++ L+ GA DYLVKP ELL
Sbjct: 695 LGLVAALRADPRTASVPVVLLSARAGQEASIEGLQAGADDYLVKPFAAAELL 746
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL D+D+ S+ + S L + Y V++ + + + A++++ + + EV T
Sbjct: 18 LRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESFHVAIVEVS---TG 74
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
K++ K+L P IM+S+ +S ++KC+ LGA ++L KPL ++L N+W H+
Sbjct: 75 NNGSFKFLETAKDL---PTIMISSIHCLSTMMKCIALGAVEFLRKPLSEDKLRNIWQHV 130
>gi|125589967|gb|EAZ30317.1| hypothetical protein OsJ_14364 [Oryza sativa Japonica Group]
Length = 274
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V +++ D D + ++ +L ++ V SP + L D+ ++LA VD+
Sbjct: 12 VFVMIVDEDKSHANFARGMLSSLNFHVIVYSSPVNALVFLENNAQDVAVVLAAVDMKQLS 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G + L+ R K Q + VIMMSA+ +S +++C++LGA + KPL + NLW H+
Sbjct: 72 GFQFLEA-ARVKR-QDLQVIMMSAETTMSTMMRCVKLGARFLVKKPLNEETVGNLWQHV 128
>gi|254000327|ref|YP_003052390.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus glucosetrophus SIP3-4]
gi|253987006|gb|ACT51863.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus glucosetrophus SIP3-4]
Length = 457
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL D++ N + L + YQ + R+ +D L G+D L+++++ +P+ G
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILREGGAD--LVVSDLHMPVMDG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
L++L+ + KE ++PVI+++AQ E+S V ++LGA+DY+++P
Sbjct: 64 LQLLQAM--QKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPF 107
>gi|238026819|ref|YP_002911050.1| multi-sensor hybrid histidine kinase [Burkholderia glumae BGR1]
gi|237876013|gb|ACR28346.1| Multi-sensor hybrid histidine kinase [Burkholderia glumae BGR1]
Length = 1182
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL ++D+ + A+ ++ ++ R+ R+ +D L G +DL+L +V +P GL
Sbjct: 1063 ILLAEDDARNIFALSHVIEPLGAKLLIARNGREALDVLE-RGEAVDLVLMDVMMPEMDGL 1121
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
I RD +P+I ++A+ V+CL+ GA DY+ KP+ + LL+L +W R
Sbjct: 1122 TATAEIRRDPRFAHLPIIALTAKAMAHDRVRCLQAGADDYISKPIDVDRLLSL-CRVWFR 1180
Query: 155 RR 156
+R
Sbjct: 1181 QR 1182
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
+L ++DLP GL +L+++ D + IP+ +++A D K L LGA Y +KP
Sbjct: 840 VLLDIDLPDRSGLTVLEWLKNDTLTRHIPIHIVAATDHTE---KALHLGAVGYTLKP 893
>gi|373454084|ref|ZP_09545964.1| hypothetical protein HMPREF9453_00133 [Dialister succinatiphilus
YIT 11850]
gi|371936347|gb|EHO64076.1| hypothetical protein HMPREF9453_00133 [Dialister succinatiphilus
YIT 11850]
Length = 229
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%)
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DL+L ++ LP GL +LK I ++Q IPVIMM+A+ +VK L LGA DY+ KP
Sbjct: 47 DLVLLDIMLPGEDGLTILKKIRASGKMQNIPVIMMTAKTSEFDIVKGLDLGADDYVTKPF 106
Query: 140 RTNELLNLWTHMWRRRRMLGLAEKNILSYD 169
ELL+ + RR R A K +LS+D
Sbjct: 107 GIMELLSRIRSVLRRTRKPQEAGKKLLSFD 136
>gi|170077989|ref|YP_001734627.1| putative two component system response regulator [Synechococcus sp.
PCC 7002]
gi|169885658|gb|ACA99371.1| putative two component system response regulator [Synechococcus sp.
PCC 7002]
Length = 395
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL D+D AV +L YQV V++P + I A AE LIL ++ +P G
Sbjct: 276 RILCIDDDFTIGKAVEQILSTQGYQVHLVQNPLEAIQAAFAEVPH--LILCDIAMPHLDG 333
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
++ + K Q +P+IM++ Q++ ++ GA DYL KP ELL L
Sbjct: 334 HEICMMLRHSKRFQNVPIIMLTGQEQFINRIQADFAGATDYLTKPFGQQELLTL 387
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 26 GFIDRSK-VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILA 84
G+ D K +++LL D DS+S+ + S L K Y V + + + + A++++ + +
Sbjct: 10 GWKDFPKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIV 69
Query: 85 EVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
EV G+ L+++ K L P IM S +S ++KC+ LGA ++L KPL ++L
Sbjct: 70 EVSAGDNDGV--LQFLESAKNL---PTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKL 124
Query: 145 LNLWTHM 151
N+W H+
Sbjct: 125 KNIWQHV 131
>gi|421600101|ref|ZP_16043175.1| two-component hybrid sensor and regulator, partial [Bradyrhizobium
sp. CCGE-LA001]
gi|404267779|gb|EJZ32385.1| two-component hybrid sensor and regulator, partial [Bradyrhizobium
sp. CCGE-LA001]
Length = 1280
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 22 SSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDL 81
SS + ID++ LL D+D+ + A+ S+L + +V + + R+ + AL +I +
Sbjct: 1152 SSDEDLIDKTA---LLVDDDARNIFALSSVLERRGMKVLTATTGREAV-ALVESNPEIAI 1207
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
+L ++ +P G + + I + R+P+I ++A+ KCL GA+DYL KP+ T
Sbjct: 1208 VLMDIMMPQMDGYQTMGVIRENPAFARLPIIALTAKAMKGDREKCLEAGASDYLAKPVNT 1267
Query: 142 NELLNLWTHMWRRR 155
++LL L MW R
Sbjct: 1268 DQLL-LAIRMWLHR 1280
>gi|307152445|ref|YP_003887829.1| PAS/PAC sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
gi|306982673|gb|ADN14554.1| PAS/PAC sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
Length = 1566
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S+ RILL D++++ D + LL Y+V +V V++AL E D L+L +V +P
Sbjct: 394 SRPRILLADDNADMRDYIKRLLTDL-YEVETVSDGIAVLEALARELPD--LVLTDVMMPG 450
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++L+ + + ++IP+I++SA+ V+ L+ GA DYL+KP ELL
Sbjct: 451 LDGFELLRELRANPNTRQIPIILLSARAGEPSRVEGLKAGADDYLIKPFSARELL 505
>gi|299149238|ref|ZP_07042298.1| putative two-component system response regulator [Bacteroides sp.
3_1_23]
gi|298512672|gb|EFI36561.1| putative two-component system response regulator [Bacteroides sp.
3_1_23]
Length = 121
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D ++ V + + Y T + P + I+ LN EG+ DLI++++ +P+
Sbjct: 2 KKKILLVD-DKSTIGKVTGVYLGKEYDFTYLEDPIKAIEWLN-EGNVPDLIISDIRMPLM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + L+Y+ ++ + IP++M+S+++ + ++ L GA DY++KP EL
Sbjct: 60 MGDEFLRYMKNNELFKSIPIVMLSSEESTTERIRLLEEGAEDYILKPFNPLEL 112
>gi|157376200|ref|YP_001474800.1| two component, sigma54 specific, Fis family transcriptional
regulator [Shewanella sediminis HAW-EB3]
gi|157318574|gb|ABV37672.1| two component, sigma54 specific, transcriptional regulator, fis
family [Shewanella sediminis HAW-EB3]
Length = 452
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
S+ +ILL ++D + +A+ L+ Y+ T V S + I + +G D+++++V +
Sbjct: 2 SEGKILLVEDDHSLREALLDTLLLAQYECTDVSSAEEAI--IKLKGESFDMVISDVQMEG 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
G+ +L Y+ + + IPV++M+A + V ++LGA DYL KP LLN
Sbjct: 60 IGGIGLLNYLHQHTQ---IPVLLMTAYATIDNAVNAIKLGAVDYLAKPFAPEVLLN 112
>gi|392409544|ref|YP_006446151.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
gi|390622680|gb|AFM23887.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
Length = 139
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+LL D+++ + + L K VTS S R+ ++ + ++ ID+++ +V +P G
Sbjct: 5 RVLLVDDETEFLETLVKRLKKRKLDVTSADSGRKALEIIQSD--PIDVVVLDVRMPDMDG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L+ LK I R K I VIM++ V V ++ + LGA DYL+KP+ +ELL ++
Sbjct: 63 LETLKEIKRLKP--SIEVIMLTGHASVEVAIQGMELGAFDYLMKPMDIDELLFKLQDAYK 120
Query: 154 RR 155
R+
Sbjct: 121 RK 122
>gi|383779849|ref|YP_005464415.1| putative multi-sensor signal transduction histidine kinase
[Actinoplanes missouriensis 431]
gi|381373081|dbj|BAL89899.1| putative multi-sensor signal transduction histidine kinase
[Actinoplanes missouriensis 431]
Length = 1360
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++++ D + LL ++VT+V RQ +DA A+ D L++++V +P GL
Sbjct: 619 VLVADDNADMRDYLVRLLRSAGHRVTAVADGRQALDAARADVPD--LVVSDVMMPEMDGL 676
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+++ + + +PV+++SA+ ++ L GA DYL KP ELL
Sbjct: 677 QLVAALRAEGRTAGVPVLLLSARAGQEAAIEGLDAGADDYLFKPFSAAELL 727
>gi|313202285|ref|YP_004040943.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus sp. MP688]
gi|312441601|gb|ADQ85707.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus sp. MP688]
Length = 457
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL D++ N + L + YQ + R+ +D L G+D L+++++ +P+ G
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILREGGAD--LVVSDLHMPVMDG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
L++L+ + KE ++PVI+++AQ E+S V ++LGA+DY+++P
Sbjct: 64 LQLLQAM--QKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPF 107
>gi|427410473|ref|ZP_18900675.1| hypothetical protein HMPREF9718_03149 [Sphingobium yanoikuyae ATCC
51230]
gi|425712606|gb|EKU75621.1| hypothetical protein HMPREF9718_03149 [Sphingobium yanoikuyae ATCC
51230]
Length = 1108
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 27/134 (20%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPR-----------QVIDALNAEGSD---- 78
RIL+ ++D V+ Y +TSV PR + +DAL A G D
Sbjct: 984 RILIVEDD-----------VRNVYSLTSVLEPRGALTQIARNGQEALDALEAAGDDPAKT 1032
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
IDL+L +V +P+ GL I D ++P++M++A+ KCL GA DY+ KP
Sbjct: 1033 IDLVLMDVMMPVMDGLTATSAIRNDARWSKLPIVMLTAKAMPDDQKKCLEAGANDYMAKP 1092
Query: 139 LRTNELLNLWTHMW 152
+ ++LL+L +W
Sbjct: 1093 IDVDKLLSL-VRVW 1105
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 26 GFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAE 85
G + K +L+ ++D + V L + +Q + ++ +D L E +IL +
Sbjct: 708 GALAEGKRVLLIIEDDEVFASIVCDLSREMGFQCIVAATGQEAVD-LAREFRPSAVIL-D 765
Query: 86 VDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ LP GL +L + D E + IP+ ++SA D L LGA YL+KP + +L
Sbjct: 766 LGLPDQSGLTVLDRLKHDDETRHIPIHVISAADHSQT---ALALGAVGYLLKPAKRAQLA 822
Query: 146 NLWTHMW-----RRRRML 158
+ + R RR+L
Sbjct: 823 EVLESLQAKLASRMRRLL 840
>gi|366166264|ref|ZP_09466019.1| winged helix family two component transcriptional regulator
[Acetivibrio cellulolyticus CD2]
Length = 238
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RIL+ +ND S + +L K SY VT V + ID A D+IL +V LP T
Sbjct: 1 MRILVVENDIYLSKVLSQILKKNSYTVTCVNNGDDGIDF--ALTGIYDIILLDVVLPKTD 58
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G+ +L+ + + + PVI++SA+ E+S V L GA DYLVKP +ELL +
Sbjct: 59 GMTVLQRLRKIR--ITTPVILLSARSEISAKVAGLDSGADDYLVKPFSLDELLARVRALG 116
Query: 153 RRRRMLGLAEKNILSY-DFDL 172
RR+ L NIL Y D +L
Sbjct: 117 RRKG--ELFSNNILVYGDIEL 135
>gi|160885786|ref|ZP_02066789.1| hypothetical protein BACOVA_03790 [Bacteroides ovatus ATCC 8483]
gi|262406299|ref|ZP_06082848.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|293373315|ref|ZP_06619673.1| response regulator receiver domain protein [Bacteroides ovatus SD
CMC 3f]
gi|298482814|ref|ZP_07000997.1| two-component system response regulator [Bacteroides sp. D22]
gi|336402646|ref|ZP_08583377.1| hypothetical protein HMPREF0127_00690 [Bacteroides sp. 1_1_30]
gi|336413884|ref|ZP_08594233.1| hypothetical protein HMPREF1017_01341 [Bacteroides ovatus
3_8_47FAA]
gi|345511088|ref|ZP_08790641.1| hypothetical protein BSAG_03829 [Bacteroides sp. D1]
gi|383113261|ref|ZP_09934035.1| hypothetical protein BSGG_4978 [Bacteroides sp. D2]
gi|423213969|ref|ZP_17200498.1| hypothetical protein HMPREF1074_02030 [Bacteroides xylanisolvens
CL03T12C04]
gi|423286199|ref|ZP_17265050.1| hypothetical protein HMPREF1069_00093 [Bacteroides ovatus
CL02T12C04]
gi|423296017|ref|ZP_17274102.1| hypothetical protein HMPREF1070_02767 [Bacteroides ovatus
CL03T12C18]
gi|156108599|gb|EDO10344.1| response regulator receiver domain protein [Bacteroides ovatus ATCC
8483]
gi|229446324|gb|EEO52115.1| hypothetical protein BSAG_03829 [Bacteroides sp. D1]
gi|262355002|gb|EEZ04093.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292631711|gb|EFF50331.1| response regulator receiver domain protein [Bacteroides ovatus SD
CMC 3f]
gi|295083866|emb|CBK65389.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain [Bacteroides
xylanisolvens XB1A]
gi|298271014|gb|EFI12592.1| two-component system response regulator [Bacteroides sp. D22]
gi|313697443|gb|EFS34278.1| hypothetical protein BSGG_4978 [Bacteroides sp. D2]
gi|335934901|gb|EGM96884.1| hypothetical protein HMPREF1017_01341 [Bacteroides ovatus
3_8_47FAA]
gi|335947857|gb|EGN09615.1| hypothetical protein HMPREF0127_00690 [Bacteroides sp. 1_1_30]
gi|392670627|gb|EIY64105.1| hypothetical protein HMPREF1070_02767 [Bacteroides ovatus
CL03T12C18]
gi|392674886|gb|EIY68328.1| hypothetical protein HMPREF1069_00093 [Bacteroides ovatus
CL02T12C04]
gi|392693312|gb|EIY86546.1| hypothetical protein HMPREF1074_02030 [Bacteroides xylanisolvens
CL03T12C04]
Length = 121
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D ++ V + + Y T + P + I+ LN EG+ DLI++++ +P+
Sbjct: 2 KKKILLVD-DKSTIGKVAGVYLGKEYDFTYLEDPIKAIEWLN-EGNVPDLIISDIRMPLM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + L+Y+ ++ + IP++M+S+++ + ++ L GA DY++KP EL
Sbjct: 60 MGDEFLRYMKNNELFKSIPIVMLSSEESTTERIRLLEEGAEDYILKPFNPLEL 112
>gi|423225950|ref|ZP_17212417.1| hypothetical protein HMPREF1062_04603 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631224|gb|EIY25200.1| hypothetical protein HMPREF1062_04603 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 119
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D S V S+ + Y + P + I+ L+ EG++ DLI++++ +P G
Sbjct: 3 QILLVD-DKASIGKVLSMYLGKEYDLAYCEDPLKAIEWLH-EGNEPDLIISDIRMPKMTG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ + IPV+M+S+++ + ++ L GA DY++KP EL
Sbjct: 61 SEFLHYLKSNELFKHIPVMMLSSEESTTERIRLLEEGAVDYILKPFNPMEL 111
>gi|310641973|ref|YP_003946731.1| hybrid sensory histidine kinase bara [Paenibacillus polymyxa SC2]
gi|386040957|ref|YP_005959911.1| cheY-like receiver [Paenibacillus polymyxa M1]
gi|309246923|gb|ADO56490.1| hybrid sensory histidine kinase BarA [Paenibacillus polymyxa SC2]
gi|343096995|emb|CCC85204.1| cheY-like receiver [Paenibacillus polymyxa M1]
Length = 853
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+ K +IL+ +++ S + L + ++VT V + R+VI+ L E D++L ++
Sbjct: 608 VSTQKYQILVAEDNEISQVVITEFLAERGFEVTIVTNGREVIELL--ERCSWDMVLLDLH 665
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSA-----QDEVSVVVKCLRLGAADYLVKP---L 139
+P G + ++I R++ R+PVI +A Q E+ CLR G D L+KP L
Sbjct: 666 MPEMDGFETARHIRRNRAFNRLPVIAFTADAVQTQQEI-----CLRAGINDVLLKPVHKL 720
Query: 140 RTNELLNLWTHMWRRRRMLGL-AEKNILSYD 169
+LN W H+ + + G+ AEK I D
Sbjct: 721 TATRILNSWIHLAWLQELHGIHAEKAIAGMD 751
>gi|383459273|ref|YP_005373262.1| sensor histidine kinase/response regulator [Corallococcus coralloides
DSM 2259]
gi|380732864|gb|AFE08866.1| sensor histidine kinase/response regulator [Corallococcus coralloides
DSM 2259]
Length = 2475
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D + A+ S+L S QV + R I+ L + D+D++L +V +P G
Sbjct: 2356 KVLLVDDDMRNIFALTSVLENHSMQVVFAENGRAAIEML-GQHPDVDVVLMDVMMPEMDG 2414
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
+ ++ I +D + +P+I ++A+ KC+ GA+DYL KP+ T++LL L +W
Sbjct: 2415 YETMRAIRKDAKYASLPIIAVTAKALKDDREKCMAAGASDYLPKPVDTDKLLEL-VRLW 2472
>gi|442319324|ref|YP_007359345.1| response regulator [Myxococcus stipitatus DSM 14675]
gi|441486966|gb|AGC43661.1| response regulator [Myxococcus stipitatus DSM 14675]
Length = 895
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K +LL D D+ S + L K + VT+ + I+ + S DL+LA+ +P
Sbjct: 2 AKQHLLLVDGDAKSLRVMEVSLKKAGFSVTTAIHGKDAIEKVQI--SPPDLVLADTKMPE 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G ++ K + D+ + IP + +++Q V V+ L LG DYL KP+ E++
Sbjct: 60 MDGFELCKALKSDERFKFIPFVFLTSQKSVEFKVRGLELGGDDYLTKPIYIKEIVT---- 115
Query: 151 MWRRRRMLGLAEKN 164
R + +L AEK
Sbjct: 116 --RVKMILQKAEKE 127
>gi|78358638|ref|YP_390087.1| Fis family transcriptional regulator [Desulfovibrio alaskensis G20]
gi|78221043|gb|ABB40392.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio alaskensis G20]
Length = 459
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
ILL D++ N + +LL Y+VT++ P + L+ SD+D+I+ ++ +P G
Sbjct: 6 HILLLDDEKNYLLVLEALLTDAGYKVTAINDPETGLAFLDE--SDVDVIVTDMKMPKITG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+L ++ K IPV++M+A + V+ ++ GA DY+ KP +ELL
Sbjct: 64 QNVLDHV--KKRFAHIPVLIMTAFGSIEGAVEVMKTGAFDYITKPFSNDELL 113
>gi|365891455|ref|ZP_09429872.1| putative sensor histidine kinase with multiple PAS/PAC and a
response regulator receiver domain [Bradyrhizobium sp.
STM 3809]
gi|365332565|emb|CCE02403.1| putative sensor histidine kinase with multiple PAS/PAC and a
response regulator receiver domain [Bradyrhizobium sp.
STM 3809]
Length = 1227
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
D + RILL D++++ D V LL Y V +V + A+ + DL+L++V +
Sbjct: 633 DAPRARILLADDNADMRDYVRRLLA-VRYDVETVADGEAALAAIGR--ARPDLVLSDVMM 689
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
P G+++L ++ + ++ IPVI++SA+ V+ ++ GA DYL+KP ELL
Sbjct: 690 PRVDGVQLLAHVRANAQISTIPVILLSARVGEESRVEGMQAGADDYLIKPFSARELL 746
>gi|358456465|ref|ZP_09166688.1| multi-sensor signal transduction histidine kinase [Frankia sp. CN3]
gi|357080206|gb|EHI89642.1| multi-sensor signal transduction histidine kinase [Frankia sp. CN3]
Length = 1417
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D++++ + + LL +QV +V + +DA+ AE D L++++V +P G
Sbjct: 661 RVLVADDNADMREYLTRLLWSAGHQVRTVTDGQAALDAIRAELPD--LVVSDVMMPRLDG 718
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
L ++ + D +P++++SA+ + ++ L GA DYLVKP +LL
Sbjct: 719 LGLVAALRADGRTASVPILLLSARADQEASIEGLEAGADDYLVKPFAAADLL 770
>gi|242081261|ref|XP_002445399.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
gi|241941749|gb|EES14894.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
Length = 123
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 51 LLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIP 110
+L C+ QVT V P+Q +D L+ E +D+ LIL + +P G +L + +L IP
Sbjct: 24 VLKSCNIQVTIVEGPKQALDFLDVE-NDVKLILTDYCMPGMTGYDLLMEVKESPKLNHIP 82
Query: 111 VIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
V++MS+ + + KCL A +Y++KP++ ++ +++++
Sbjct: 83 VVIMSSDNIPERIQKCLAARAKEYIIKPIKVADVHRIFSYI 123
>gi|153868898|ref|ZP_01998627.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
gi|152074527|gb|EDN71372.1| two-component hybrid sensor and regulator [Beggiatoa sp. PS]
Length = 378
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+ +++ + +L + Y+V R+ +Q + L A S DLIL ++ +P G
Sbjct: 6 ILVVDDLADNLRVLIGILSQQGYKVRPARNGQQAL--LMARTSPPDLILLDIMMPEMDGY 63
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTHMWR 153
++ + + D++ IP+I +SA +EV +K LGA DY+ KP + E+L + TH+
Sbjct: 64 EVCQQLKADQKTHHIPIIFISALNEVLDKIKAFSLGAVDYITKPFQAEEVLARVETHLKL 123
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSDANT 182
R L + ++ LVA + NT
Sbjct: 124 HRLHHELVQSEKMASLGRLVAGFAHELNT 152
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL--------NAEGSDID 80
D +V +L D+ + LL S +VT+V S R+ + L + +G +D
Sbjct: 25 DNDEVHVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGLDEEKSTSIQGLKVD 84
Query: 81 LILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
LI+ + +P G ++LK I + IPV++MS+++ ++ + +CL GA D+LVKP++
Sbjct: 85 LIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDFLVKPVK 144
Query: 141 TNELLNLWTHMWRR 154
+++ + +M R
Sbjct: 145 LSDVKRIRDYMTAR 158
>gi|145220040|ref|YP_001130749.1| two component sigma54 specific Fis family transcriptional regulator
[Chlorobium phaeovibrioides DSM 265]
gi|145206204|gb|ABP37247.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Chlorobium phaeovibrioides DSM 265]
Length = 487
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K ++L+ D+D S + K Y+ V R+ + A+ E D+ +L ++++P+
Sbjct: 19 KRKVLIADDDETSRRVFGHFVSKMGYEAIMVNDGRECVQAMAEESPDV--VLLDINMPVL 76
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G +++++ + P+I+++A E+ VKC++LGA +YL KPL + L
Sbjct: 77 DGFEVMQHAKSQNDTT--PIIIITASHEIPSAVKCIKLGAYEYLTKPLNIDRL 127
>gi|218130219|ref|ZP_03459023.1| hypothetical protein BACEGG_01807 [Bacteroides eggerthii DSM 20697]
gi|217987723|gb|EEC54051.1| response regulator receiver domain protein [Bacteroides eggerthii
DSM 20697]
Length = 119
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D + V + + Y + P + ++ LN EG+ DLI++++ +P +G
Sbjct: 3 KILLVD-DKVTIGRVLKIYLGTEYDLEYFEDPLKALEWLN-EGNLPDLIISDIRMPHMRG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ L+ IPV+M+S+++ + + L GAADY++KP EL
Sbjct: 61 NEFLYYLKGNELLKHIPVVMLSSEESTTERIHLLEAGAADYILKPFNPLEL 111
>gi|160899786|ref|YP_001565368.1| multi-sensor hybrid histidine kinase [Delftia acidovorans SPH-1]
gi|160365370|gb|ABX36983.1| multi-sensor hybrid histidine kinase [Delftia acidovorans SPH-1]
Length = 1287
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLK 95
++C +D+ + L++ Y+V V R + +++ + D L+LA+V +P+ G +
Sbjct: 657 IVCADDNADMRSYIGQLLEPLYEVEIVGDGRAALASIHRQRPD--LVLADVMMPVLDGFE 714
Query: 96 MLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+L + D+ + IPVIM+SA+ V+ LR GA DYLVKP ELL
Sbjct: 715 LLHALRSDETTRAIPVIMLSARAGQEAQVEGLRAGADDYLVKPFSARELL 764
>gi|153806160|ref|ZP_01958828.1| hypothetical protein BACCAC_00415 [Bacteroides caccae ATCC 43185]
gi|423218924|ref|ZP_17205420.1| hypothetical protein HMPREF1061_02193 [Bacteroides caccae
CL03T12C61]
gi|149130837|gb|EDM22043.1| response regulator receiver domain protein [Bacteroides caccae ATCC
43185]
gi|392626541|gb|EIY20587.1| hypothetical protein HMPREF1061_02193 [Bacteroides caccae
CL03T12C61]
Length = 121
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D + V + + Y T + P + I+ LN EG+ DLI++++ +P+
Sbjct: 2 KKKILLVD-DKATIGKVAGIYLGKDYDFTYLEDPIKAIEWLN-EGNVPDLIISDIRMPLM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + L+Y+ ++ + IP++M+S+++ + ++ L GA DY++KP EL
Sbjct: 60 TGDEFLRYMKNNELFKSIPIVMLSSEESTTERIRLLEEGAEDYILKPFNPLEL 112
>gi|393783529|ref|ZP_10371701.1| hypothetical protein HMPREF1071_02569 [Bacteroides salyersiae
CL02T12C01]
gi|392668454|gb|EIY61949.1| hypothetical protein HMPREF1071_02569 [Bacteroides salyersiae
CL02T12C01]
Length = 121
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D S V S+ + Y T +P + I+ L+ EG+ DLI++++ +P
Sbjct: 2 KKKILLID-DKASIAKVVSIYLGKEYDFTYCENPIKAIEWLH-EGNMPDLIISDIRMPEM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + L Y+ ++ + IP+IM+S+++ + ++ L GAADY++KP EL
Sbjct: 60 MGDEFLLYMKHNELFKSIPIIMLSSEESTTERIRLLEEGAADYILKPFNPLEL 112
>gi|115377600|ref|ZP_01464797.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|310820429|ref|YP_003952787.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|115365401|gb|EAU64439.1| multi-sensor Hybrid Histidine Kinase [Stigmatella aurantiaca
DW4/3-1]
gi|309393501|gb|ADO70960.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 1020
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 21/132 (15%)
Query: 22 SSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL--NAEGSDI 79
SSG G +KVRILL D++++ + V LL SPR ++A+ A D+
Sbjct: 624 SSGGG--ADAKVRILLADDNADMREYVARLL-----------SPRWTVEAVADGAAALDV 670
Query: 80 ------DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAAD 133
DL+L +V +P G +L+ + + IPVIM+SA+ V+ + GA D
Sbjct: 671 ALARPPDLVLTDVMMPRLDGFGLLRALRSQASTRAIPVIMLSARAGEEARVEGMEAGADD 730
Query: 134 YLVKPLRTNELL 145
YLVKP ELL
Sbjct: 731 YLVKPFSARELL 742
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L +DS+ AV + +++ S ++VT+V S ++ ++ L +E ++ +I+ + +P G
Sbjct: 30 VLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGSE-PNVSMIITDYWMPEMTGY 88
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
++LK + +L++IPV++MS+++ + + +CL GA D+LVKP+R +++ L++ +
Sbjct: 89 ELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRV 145
>gi|334117422|ref|ZP_08491513.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460531|gb|EGK89139.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 352
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + D + L + + VT Q ++ L ++ DL+L ++ +P G
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRSD--PFDLVLLDIMMPQMNGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D+ L+ IPVIM+SA D++ +V+C+ LGA DYL KP
Sbjct: 66 QVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKPF 110
>gi|343516480|ref|ZP_08753515.1| response regulator receiver protein [Vibrio sp. N418]
gi|342796065|gb|EGU31760.1| response regulator receiver protein [Vibrio sp. N418]
Length = 508
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 19 NSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
N S D +D R +L +D S+ V L+K Y++ + RS Q ID + ++
Sbjct: 144 NRSSDKDLQLDVEVKRTILVVDDEPSNLQVLGELLKPIYKIKACRSGAQAID-ICSKADK 202
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
DLIL ++ +P GL + K + D + + IP+I +SA + VVK L+LGA DY++KP
Sbjct: 203 PDLILLDIMMPEMDGLAVCKALKSDPDTEFIPIIFVSALSQTDDVVKGLKLGALDYIMKP 262
Query: 139 L 139
+
Sbjct: 263 V 263
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 75 EGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
E + +D+I+++ +P GL++LK + + K + +P IM++ S VV+ + G ++Y
Sbjct: 57 ERNSVDIIVSDWKMPKMTGLELLKKVRQSKAHKSVPFIMLTGNLHQSDVVEAIEAGVSEY 116
Query: 135 LVKPL 139
LVKP
Sbjct: 117 LVKPF 121
>gi|343511279|ref|ZP_08748453.1| response regulator receiver protein [Vibrio scophthalmi LMG 19158]
gi|342798612|gb|EGU34211.1| response regulator receiver protein [Vibrio scophthalmi LMG 19158]
Length = 508
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 19 NSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD 78
N S D +D R +L +D S+ V L+K Y++ + RS Q ID + ++
Sbjct: 144 NRSSDKDLQLDVEVKRTILVVDDEPSNLQVLGELLKPIYKIKACRSGAQAID-ICSKADK 202
Query: 79 IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
DLIL ++ +P GL + K + D + + IP+I +SA + VVK L+LGA DY++KP
Sbjct: 203 PDLILLDIMMPEMDGLAVCKALKSDPDTEFIPIIFVSALSQTDDVVKGLKLGALDYIMKP 262
Query: 139 L 139
+
Sbjct: 263 V 263
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%)
Query: 75 EGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
E + +D+I+++ +P GL++LK + + K + +P IM++ S VV+ + G ++Y
Sbjct: 57 ERNSVDIIVSDWKMPKMTGLELLKKVRQSKAHKSVPFIMLTGNLHQSDVVEAIEAGVSEY 116
Query: 135 LVKPL 139
LVKP
Sbjct: 117 LVKPF 121
>gi|38346502|emb|CAE02103.2| OSJNBa0020I02.16 [Oryza sativa Japonica Group]
Length = 252
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
V +++ D D + ++ +L ++ V SP + L D+ ++LA VD+
Sbjct: 12 VFVMIVDEDKSHANFARGMLSSLNFHVIVYSSPVNALVFLENNAQDVAVVLAAVDMKQLS 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G + L+ R K Q + VIMMSA+ +S +++C++LGA + KPL + NLW H+
Sbjct: 72 GFQFLEA-ARVKR-QDLQVIMMSAETTMSTMMRCVKLGARFLVKKPLNEETVGNLWQHV 128
>gi|302142082|emb|CBI19285.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 84 KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFA 131
>gi|209528443|ref|ZP_03276873.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|423063642|ref|ZP_17052432.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
gi|209491122|gb|EDZ91547.1| adenylate/guanylate cyclase [Arthrospira maxima CS-328]
gi|406715074|gb|EKD10232.1| guanylate cyclase:Response regulator [Arthrospira platensis C1]
Length = 352
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + D + L K Y V + + + + + + +DL+L ++ +P G
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIMRS--TALDLVLLDIMMPQMNGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
++L+ + D +L+ IPVIM+SA +++ +V+C+ LGA DYL KP + H+ R
Sbjct: 66 QVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP---------FNHVLLR 116
Query: 155 RRMLGLAEK 163
R+ EK
Sbjct: 117 ARINACLEK 125
>gi|227486683|ref|ZP_03916999.1| DNA-binding response regulator [Anaerococcus lactolyticus ATCC
51172]
gi|227235395|gb|EEI85410.1| DNA-binding response regulator [Anaerococcus lactolyticus ATCC
51172]
Length = 237
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K++IL+ +++ + ++ V S LVK Y+V + + AE DIDL++ ++ LP
Sbjct: 3 KIKILIIEDEESINNIVKSYLVKEGYEVYQAFDGEEGLRKFLAE--DIDLVILDLMLPKM 60
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G ++K I E +PVIM+SA+ E + V LRLGA DY+ KP EL+ +
Sbjct: 61 LGEDVMKEIRNRSE---VPVIMLSAKVEENDKVTGLRLGADDYITKPFSARELIERIKAV 117
Query: 152 WRR 154
RR
Sbjct: 118 LRR 120
>gi|50084599|ref|YP_046109.1| 2-component regulatory protein [Acinetobacter sp. ADP1]
gi|6127220|gb|AAF04314.1| putative 2-component regulatory protein [Acinetobacter sp. ADP1]
gi|49530575|emb|CAG68287.1| putative 2-component regulatory protein [Acinetobacter sp. ADP1]
Length = 226
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
++IL ++D + LL ++V ++ + +D L + L+L ++ LP +
Sbjct: 2 IKILYIEDDVMIGKTTYQLLRHEKFEVDWAKTGLEALDFLFRQTYH--LVLLDLGLPELE 59
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GL +LK+I + EL +I VI++SA+D+ ++ L+LGA DY+VKP +EL+ +
Sbjct: 60 GLDVLKHIRKKIELNKIAVIIISARDQSRDKIQGLKLGADDYIVKPYDFDELVARIESVL 119
Query: 153 RRRRMLGLAEKNI 165
RR L E N
Sbjct: 120 RRGNYASLNELNF 132
>gi|359492959|ref|XP_002283738.2| PREDICTED: GATA transcription factor 24-like [Vitis vinifera]
Length = 368
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 128 KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFA 175
>gi|153870385|ref|ZP_01999797.1| Response regulator receiver protein [Beggiatoa sp. PS]
gi|152073147|gb|EDN70201.1| Response regulator receiver protein [Beggiatoa sp. PS]
Length = 855
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+++ + + + L Y S R+ + L EG DLIL +V +P G
Sbjct: 562 KILIVDDEAVNLHVLANHLSLNHYATIQAASGREALSILE-EGLIPDLILLDVMMPHMTG 620
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-NLWTHM 151
++ + I E +P+++++A+++VS +V L +GA DYL+KP+ NELL + TH+
Sbjct: 621 YEVTQKIREHWEANELPIVLLTAKNQVSDLVMGLEVGANDYLIKPISKNELLARIKTHL 679
>gi|119505208|ref|ZP_01627283.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
gi|119458899|gb|EAW39999.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
Length = 482
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL D+ + + V LL K + V S S + ++ L+ G +D++L ++ +P G
Sbjct: 130 ILAVDDLPENRELVSRLLQKTGHTVISAESGEEALELLDTMG--VDVVLLDLVMPGIGGA 187
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++LK + D+ L+ PV+M+S Q ++ +V C+ GA DYL+KP
Sbjct: 188 EVLKRLKEDERLRATPVVMISGQQDMDQIVMCIEAGADDYLLKPF 232
>gi|56752288|ref|YP_172989.1| two-component response regulator [Synechococcus elongatus PCC 6301]
gi|56687247|dbj|BAD80469.1| two-component response regulator [Synechococcus elongatus PCC 6301]
Length = 411
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ +++ + D + L + + V V S ++ ++ L + DL+ ++ +P G
Sbjct: 174 RLLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQLAQQP--FDLLFLDLMMPGLTG 231
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D L +PV+M+SA D++ V++CLRLGA DYL KP
Sbjct: 232 FEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYLTKPF 277
>gi|392951366|ref|ZP_10316921.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
gi|391860328|gb|EIT70856.1| hypothetical protein WQQ_09930 [Hydrocarboniphaga effusa AP103]
Length = 1327
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
+ R+LL D++++ + V SLL ++V+ V AL +G DL+L +V +P
Sbjct: 624 RARVLLADDNADMREYVHSLL-SAQHEVSCVADGLAAWQAL--QGEPPDLLLTDVMMPGL 680
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G +L+ + D L+ +PV+++SA+ V+ L GA DYLVKP ELL
Sbjct: 681 DGFGLLRRVRGDARLRELPVVLLSARAGEESRVEGLNAGADDYLVKPFAAKELL 734
>gi|343508480|ref|ZP_08745822.1| response regulator receiver protein [Vibrio ichthyoenteri ATCC
700023]
gi|342793794|gb|EGU29582.1| response regulator receiver protein [Vibrio ichthyoenteri ATCC
700023]
Length = 507
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D R +L +D S+ V L+K Y++ + RS Q ID + A+ DLIL ++
Sbjct: 153 LDAEVKRTILVVDDEPSNLQVLGELLKPIYKIKACRSGAQAID-ICAKADKPDLILLDIM 211
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+P GL++ K + D + IP+I +SA + VVK L+LGA DY++KP+
Sbjct: 212 MPEMDGLEVCKALKSDPVTEFIPIIFVSALSQTDDVVKGLKLGALDYIMKPV 263
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 75 EGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADY 134
E + +D+I+++ +P GL++LK + K Q+ P IM++ S VV+ + G ++Y
Sbjct: 57 ERNSVDIIVSDWKMPKMDGLELLKKVRESKHHQKTPFIMLTGNLNQSDVVQAIEAGVSEY 116
Query: 135 LVKPL 139
LVKP
Sbjct: 117 LVKPF 121
>gi|148550789|ref|YP_001260228.1| multi-sensor hybrid histidine kinase [Sphingomonas wittichii RW1]
gi|148503208|gb|ABQ71461.1| multi-sensor hybrid histidine kinase [Sphingomonas wittichii RW1]
Length = 1143
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLP 89
RIL+ ++D + ++ S+L V R+ ++ IDAL G D +DL+L +V +P
Sbjct: 1019 RILIVEDDVRNVYSLSSVLEPRGAIVQIARNGQEAIDALAQAGDDAAKAVDLVLMDVMMP 1078
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
+ GL + I D ++P++M++AQ +CL GA DY+ KP+ ++LL+L
Sbjct: 1079 VMDGLTATREIRADPRWTKLPIVMLTAQAMPDDQQRCLEAGANDYMAKPIDVDKLLSL-V 1137
Query: 150 HMW 152
+W
Sbjct: 1138 RVW 1140
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 34 RILLCDNDSNSSDAVFSLLV-----KCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
R+LL D DAVF+ +V + +Q + I +A I+ ++ L
Sbjct: 750 RVLLVIED----DAVFAQIVCELSRELGFQCVIAGNAEDAIK--HAHEFKPSAIVLDLGL 803
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW 148
P GL +L + D E + IP+ ++SA D+ L LGA Y +KP++ EL +
Sbjct: 804 PDQSGLTVLDRLKHDDETRHIPIHVISAADQSQT---ALSLGAVGYHIKPVKREELAQVL 860
Query: 149 THM-----WRRRRML 158
+ R RR+L
Sbjct: 861 EGLQAKLALRMRRVL 875
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 18/146 (12%)
Query: 26 GFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL------------- 72
G S+ +L D+ + LL SYQVT+V S + ++ L
Sbjct: 2 GMAAESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTP 61
Query: 73 -----NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
N + +++L++ + +P G +LK I L+ IPV++MS+++ S + +CL
Sbjct: 62 SVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCL 121
Query: 128 RLGAADYLVKPLRTNELLNLWTHMWR 153
GA ++ +KP+R ++L L HM +
Sbjct: 122 EEGAEEFFLKPVRLSDLNRLKPHMKK 147
>gi|21655154|gb|AAL99264.1| CONSTANS-like protein CO5 [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 427 VNGMASFPYYPIN-------MCLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFR 479
G +P + +N + + P +SA P+ +PS V +K REA L+++R
Sbjct: 201 AGGTLFYPEHSMNHSMSTSEVAVVPDALSAGGAPA--PAPSVAVVASKGKEREARLMRYR 258
Query: 480 QKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+KRK R F K IRY +RK AE RPR++G+F ++
Sbjct: 259 EKRKNRRFQKTIRYASRKAYAETRPRIKGRFAKRT 293
>gi|393773566|ref|ZP_10361963.1| multi-sensor hybrid histidine kinase [Novosphingobium sp. Rr 2-17]
gi|392721048|gb|EIZ78516.1| multi-sensor hybrid histidine kinase [Novosphingobium sp. Rr 2-17]
Length = 1151
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLP 89
RIL+ ++D + ++ ++L V R+ ++ +DAL A D IDL+L +V +P
Sbjct: 1027 RILVVEDDVRNVFSLTNILEPQGAVVEIARNGQEALDALEASAGDETRKIDLVLMDVMMP 1086
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
+ GL + I RD R+PVI ++A+ +C+ GA DY+ KPL ++LL+L
Sbjct: 1087 VMDGLTATRTIRRDPRWARLPVITLTAKAMPDDQERCIEAGANDYMAKPLDVDKLLSL-V 1145
Query: 150 HMW 152
+W
Sbjct: 1146 RVW 1148
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 82 ILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++ +V LP GL +L + RD + + IPV ++S D V L LGA YLVKP++
Sbjct: 805 VVLDVGLPDQSGLALLDRLKRDVDTRHIPVHIVSGSDHTQV---ALSLGAVGYLVKPVKR 861
Query: 142 NELLNLWTHMWRR-----RRML 158
+L + + R RR+L
Sbjct: 862 EDLAGVLQALSDRLVTGTRRVL 883
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Query: 33 VRILLCDNDSNSSDAVFSLLV---KC--SYQVTSVRSPRQVIDALNA----EGSDIDLIL 83
+R+LL D DS V L++ C S+ V +V S ++ ++ L E DID++L
Sbjct: 10 MRVLLVD-DSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLKDGKEQQDIDMVL 68
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
+ +P G +LK I L+ IPVI+MS+++E + +CL+ GA DY+VKPLR+ +
Sbjct: 69 TDYCMPEMTGYDLLKAIKALSPLKPIPVIVMSSENEPQRISRCLKAGAEDYIVKPLRSKD 128
Query: 144 L 144
+
Sbjct: 129 V 129
>gi|414870674|tpg|DAA49231.1| TPA: hypothetical protein ZEAMMB73_704016 [Zea mays]
Length = 123
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 51 LLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIP 110
+L C+ QVT V P+Q +D L+ E +D++LIL + +P G +L + +L+ IP
Sbjct: 24 VLKTCNIQVTMVEGPKQALDFLDVE-NDVNLILTDYCMPGMTGYDLLMEVKESPKLKHIP 82
Query: 111 VIMMSAQDEVSVVVKCLRLGAADYLVKPLR 140
V++MS+ + KC+ GA +Y++KP++
Sbjct: 83 VVVMSSDHIPQRMQKCMDAGAKEYIIKPIK 112
>gi|317476709|ref|ZP_07935953.1| response regulator receiver domain-containing protein [Bacteroides
eggerthii 1_2_48FAA]
gi|316907172|gb|EFV28882.1| response regulator receiver domain-containing protein [Bacteroides
eggerthii 1_2_48FAA]
Length = 119
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D + V + + Y + P + ++ LN EG+ DLI++++ +P +G
Sbjct: 3 KILLVD-DKVTIGRVLKIYLGTEYDLEYFEDPIKALEWLN-EGNLPDLIISDIRMPHMRG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ L+ IPV+M+S+++ + + L GAADY++KP EL
Sbjct: 61 NEFLYYLKGNELLKHIPVVMLSSEESTTERIHLLEAGAADYILKPFNPLEL 111
>gi|354805221|gb|AER41637.1| CCT+motif+family+protein [Oryza officinalis]
Length = 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
G S + + + + REA L+++++KRK+RC++K+IRY +RK AE RPRVRG+F ++
Sbjct: 176 GESLNPNIVVGAMVEREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPE 235
Query: 516 GVNVDLNGQPSSVD 529
V L PS+ D
Sbjct: 236 AVAPPLP-PPSTYD 248
>gi|337751510|ref|YP_004645672.1| protein DhkJ [Paenibacillus mucilaginosus KNP414]
gi|336302699|gb|AEI45802.1| DhkJ [Paenibacillus mucilaginosus KNP414]
Length = 1256
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D + A+ +LL QV + + ++ L E D DL+L ++ +P G
Sbjct: 1137 KVLIVDDDIRNVFALSNLLEGLDMQVAFAETGKGALEQLEKE-PDFDLVLMDIMMPEMDG 1195
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I D+ R+P+I ++A+ KC++ GA+DY+ KP+ T +LL+L +W
Sbjct: 1196 YEAMRSIRDDERFDRLPIIALTAKAMKDDREKCIQAGASDYITKPVHTEQLLSLM-RVWL 1254
Query: 154 RR 155
R
Sbjct: 1255 SR 1256
>gi|333914112|ref|YP_004487844.1| PAS/PAC sensor hybrid histidine kinase [Delftia sp. Cs1-4]
gi|333744312|gb|AEF89489.1| PAS/PAC sensor hybrid histidine kinase [Delftia sp. Cs1-4]
Length = 1272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGLK 95
++C +D+ + L++ Y+V V R + +++ + D L+LA+V +P+ G +
Sbjct: 642 IVCADDNADMRSYIGQLLEPLYEVEIVGDGRAALASIHRQRPD--LVLADVMMPVLDGFE 699
Query: 96 MLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+L + D+ + IPVIM+SA+ V+ LR GA DYLVKP ELL
Sbjct: 700 LLHALRSDETTRAIPVIMLSARAGQEAQVEGLRAGADDYLVKPFSARELL 749
>gi|119899743|ref|YP_934956.1| pilus protein [Azoarcus sp. BH72]
gi|119672156|emb|CAL96070.1| pilus protein [Azoarcus sp. BH72]
Length = 121
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+ A+ LL + YQV + S + I +E D LIL +V +P G
Sbjct: 5 KILVVDDSPTERLALTELLTRHGYQVATAESGEEAITKSKSEKPD--LILMDVVMPGMNG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ + I+RD + IP+IM +++ + + +R GA DYLVKP+ NELL
Sbjct: 63 YQATRTISRDDATRNIPIIMCTSKGLETDKIWGMRQGAYDYLVKPVEHNELL 114
>gi|196234681|ref|ZP_03133495.1| histidine kinase [Chthoniobacter flavus Ellin428]
gi|196221254|gb|EDY15810.1| histidine kinase [Chthoniobacter flavus Ellin428]
Length = 682
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D++S + + + L + + + VRS + +D L E D+++ ++ +P G
Sbjct: 167 KMLIVDDESLNREILIRRLQREACRPVGVRSGPEALDLLRRE--KFDVVMLDIQMPGMNG 224
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+ +L + +D +L+ +PVIM+SA +V V +C+ LGA DYL KP+
Sbjct: 225 IDVLHALKQDPQLRHLPVIMLSALTDVDRVARCIELGAEDYLPKPV 270
>gi|443479084|ref|ZP_21068741.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
gi|443015499|gb|ELS30421.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena biceps PCC 7429]
Length = 336
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSY-QVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
D ++ ++L+ D++ + + ++ L Y +T S ++ ++ + +DLIL ++
Sbjct: 3 DLNESKLLIIDDEQMNREILYRHLRNLGYPNITMAESGKKGLEIV--ANQPVDLILLDMM 60
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
+PM GL++L Y+ + E + IPVI++SA DE +++ C++ GA DYL+KP
Sbjct: 61 MPMLNGLEVLTYLKENPEWRVIPVIIISALDEKEMMLACIQKGAEDYLIKP 111
>gi|373854676|ref|ZP_09597474.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
gi|372472543|gb|EHP32555.1| response regulator receiver modulated serine phosphatase
[Opitutaceae bacterium TAV5]
Length = 502
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D++ + D + L + + V + + ++ L A DL+L ++ +P+ G
Sbjct: 118 RILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERLRA--GPFDLVLLDMMMPVLDG 175
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
L I D L+ +PVIM+SA DE++ VV+C+ GA D+L KP
Sbjct: 176 YGALDAIKTDPALRHLPVIMISALDELASVVRCIERGAEDFLPKPF 221
>gi|392411103|ref|YP_006447710.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
gi|390624239|gb|AFM25446.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfomonile tiedjei DSM 6799]
Length = 483
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI-DLILAEVDLPMTKG 93
+L+ ++D + LLV ++ V S + I+ L+ G + D+IL +V+LP G
Sbjct: 10 VLVIEDDPFNGPFTQQLLVSAGFEAYLVGSAEEGIEFLDRSGDNCPDMILLDVNLPGMDG 69
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L+ + + E Q IPVI+ + D + ++ L G DYL+KP +EL+ M R
Sbjct: 70 LETVTKLKAHPEYQYIPVIIFTVHDTLDYKIQGLNSGGDDYLIKPYEPDELIARVNAMLR 129
Query: 154 RRRM 157
RR+
Sbjct: 130 IRRL 133
>gi|326517292|dbj|BAK00013.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 427 VNGMASFPYYPIN-------MCLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFR 479
G +P + +N + + P +SA P+ +PS V +K REA L+++R
Sbjct: 201 AGGTLFYPEHSMNHSMSTSEVAVVPDALSAGGAPA--PAPSVAVVASKGKEREARLMRYR 258
Query: 480 QKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 514
+KRK R F K IRY +RK AE RPR++G+F ++
Sbjct: 259 EKRKNRRFQKTIRYASRKAYAETRPRIKGRFAKRT 293
>gi|356508042|ref|XP_003522771.1| PREDICTED: GATA transcription factor 24-like isoform 1 [Glycine
max]
Length = 350
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 122 KRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 169
>gi|315637701|ref|ZP_07892905.1| response regulator [Arcobacter butzleri JV22]
gi|315478014|gb|EFU68743.1| response regulator [Arcobacter butzleri JV22]
Length = 221
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL ++D NS+ + + L + ++V V + I +N I IL +++LP G
Sbjct: 4 KILLVEDDDNSALLISNFLEEFDFKVDIVNTVTDAISNINFNKYSI--ILLDINLPDFNG 61
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL-LNLWTHM 151
++LK++ ++K + IP++++SA + + ++ +LGA+DY+VKP+ EL +W +
Sbjct: 62 FEVLKFVNKNK--KNIPILVLSAYSDKNTKLQAFKLGASDYMVKPIDPEELEARIWVQL 118
>gi|304439115|ref|ZP_07399034.1| response regulator [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372474|gb|EFM26061.1| response regulator [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 217
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 19/168 (11%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ ++D N + + S+ + Y+V SV + + + ++ D DLIL +++LP G
Sbjct: 3 KILIIEDDKNLNKGL-SIALNKDYEVLSVNTISEAKNFID----DADLILLDMNLPDGDG 57
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L+++KY TR IP+I++SA D + ++ + LGA DYL KP L + +
Sbjct: 58 LEIIKY-TRQS--SSIPIIVLSAIDLEAYIISAINLGADDYLTKPFS----LGILEAKIK 110
Query: 154 RRRMLGLAEKNILSYDFDLVASDPSDANTNSTTLFSDDTD-DKSRRST 200
R A + I+S D +L D D N N T F D+ + D +R T
Sbjct: 111 R------AFEKIVSSDLNLYKKDGLDFNFNENTFFVDNKNIDLTRTET 152
>gi|220906186|ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
Length = 406
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+ + D + L + + V + +Q + L E DL+L +V +P G
Sbjct: 175 KILVVDDTLINRDLLSRRLERQGHTVKLSENGQQALQLL--ESQSFDLVLLDVIMPKMNG 232
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
L++L+ + + IPVIM+SA DEV V+C+ LGA DYL KP T
Sbjct: 233 LELLRLMKDTPNWKDIPVIMISALDEVESAVRCIELGAEDYLTKPFNT 280
>gi|376316614|emb|CCG00001.1| Transcriptional regulatory protein zraR [uncultured Flavobacteriia
bacterium]
Length = 383
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 69 IDALN-AEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+DA+N G+ DL+L ++ +P GL +LKYI +DK +Q +PV+M+S ++ V+ +
Sbjct: 37 VDAINQLNGTTFDLVLCDIKMPKKDGLDVLKYI-KDKNIQ-MPVVMISGHGDLETAVQAM 94
Query: 128 RLGAADYLVKPLRTNELL 145
RLGA DY+ KP N LL
Sbjct: 95 RLGAYDYIAKPPDLNHLL 112
>gi|254415503|ref|ZP_05029263.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
gi|196177684|gb|EDX72688.1| PAS fold family [Coleofasciculus chthonoplastes PCC 7420]
Length = 510
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D+ + V L+K + V +V+S Q + + ++ DLIL +V +P G
Sbjct: 7 QILLVDDTVANLQLVSDFLMKAGFNVLAVKSGIQALKIVAI--TEPDLILLDVVMPEMDG 64
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEV---SVVVKCLRLGAADYLVKPLRTNE-LLNLWT 149
++ + + +E Q IPVI M+A + S +K L+LGA DY+ KP++ E LL + T
Sbjct: 65 FEVCRRLKAQEETQDIPVIFMTAVADRANPSYKIKGLKLGAVDYISKPIQLEEVLLRVQT 124
Query: 150 HMWRRRRMLGLAEKN 164
H+ R L E+N
Sbjct: 125 HLQLRALTQQLTEQN 139
>gi|386827615|ref|ZP_10114722.1| family 3 adenylate cyclase [Beggiatoa alba B18LD]
gi|386428499|gb|EIJ42327.1| family 3 adenylate cyclase [Beggiatoa alba B18LD]
Length = 545
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D+ ++ D + L + + V + Q + + A DL+L ++ +P G
Sbjct: 201 RLLVVDDKESNRDLLSRRLDRQGFHVDIAENGLQALQKVQA--YRYDLVLLDIIMPEMNG 258
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L I D L+ +PVIM+SA DE+ VV C+ LGA DYL KP
Sbjct: 259 FQVLAAIKSDPALRHLPVIMISALDEIDSVVHCIELGAEDYLQKPF 304
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 26 GFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD------- 78
G S+ +L D+ + LL SYQVT+V S + ++ L +D
Sbjct: 2 GMSTESQFHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVS 61
Query: 79 --------IDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLG 130
++LI+ + +P G +LK I L+ IPV++MS+++ S + +CL G
Sbjct: 62 PNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEG 121
Query: 131 AADYLVKPLRTNELLNLWTHMWRRR 155
A ++ +KP++ +++ L HM + +
Sbjct: 122 AEEFFLKPVQISDVNRLKPHMMKAK 146
>gi|206890910|ref|YP_002249178.1| nitrogen assimilation regulatory protein NtrX [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742848|gb|ACI21905.1| nitrogen assimilation regulatory protein NtrX [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 457
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +IL+ D++ D V +L Y + + I+ L+ E D+DL+ +V LP
Sbjct: 2 KGKILIIDDEVGILDTVSGILEDEGYTTLTAKDAETAIEILDKE--DVDLVFLDVWLPKM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
G++ +K I ++K+ IPVIM+S V V V+ ++LGA D+L KPL
Sbjct: 60 SGIEAIKKI-KEKDFH-IPVIMISGHGNVEVAVQAVKLGAFDFLEKPL 105
>gi|359794219|ref|ZP_09296936.1| putative adenylate/guanylate cyclase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359249531|gb|EHK53132.1| putative adenylate/guanylate cyclase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 516
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+ ++ D + L+ +QV + S + L + + DL+L ++ +P G
Sbjct: 175 RILVVDDIGSNRDLLSRRLLHDGHQVFTAESGLSALTCLAED--EFDLVLLDLLMPDMNG 232
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP-----LRTNELLNLW 148
+++L + ++ + IPVIM+S +EV VV+C+ GA DYL+KP LR +L
Sbjct: 233 IEVLSRLKAERRWRHIPVIMISGLNEVDAVVRCIEAGADDYLLKPFNPVLLRARIHSSLE 292
Query: 149 THMWRRR 155
WR R
Sbjct: 293 RKRWRDR 299
>gi|288959503|ref|YP_003449844.1| DNA-binding two-component response regulator [Azospirillum sp.
B510]
gi|288911811|dbj|BAI73300.1| DNA-binding two-component response regulator [Azospirillum sp.
B510]
Length = 253
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D+D V L K Y+VT VR +++ L+ G+ +DLI+ ++ LP GL
Sbjct: 7 LLVVDDDREIRSLVAQFLTKHGYRVTGVRDGAEMMRTLD--GARVDLIVLDLMLPGEDGL 64
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ + + + + PVIM++A E + + L +GA DYL KP ELL + RR
Sbjct: 65 SLCRRLRATLQTAQTPVIMLTAMGEETDRIVGLEMGADDYLAKPFSPRELLARIKAVLRR 124
>gi|255535912|ref|YP_003096283.1| two-component response regulator [Flavobacteriaceae bacterium
3519-10]
gi|255342108|gb|ACU08221.1| two-component response regulator [Flavobacteriaceae bacterium
3519-10]
Length = 118
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ ++D + LVK Y+V R+ + ID + +++DLI+ ++ +P G+
Sbjct: 3 ILVAEDDELILKTIEHKLVKEGYEVILTRNGKDAIDKILE--TEVDLIITDIMMPFASGI 60
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++L I + IPVIM+S+ + V++ LGAAD++VKP NEL+
Sbjct: 61 EILSAIKIAG--KNIPVIMLSSMGQEDVILNAFDLGAADFIVKPFSPNELM 109
>gi|386727215|ref|YP_006193541.1| protein DhkJ [Paenibacillus mucilaginosus K02]
gi|384094340|gb|AFH65776.1| DhkJ [Paenibacillus mucilaginosus K02]
Length = 1236
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D + A+ +LL QV + + ++ L E D DL+L ++ +P G
Sbjct: 1117 KVLIVDDDIRNVFALSNLLEGLDMQVAFAETGKGALEQLEKE-PDFDLVLMDIMMPEMDG 1175
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I D+ R+P+I ++A+ KC++ GA+DY+ KP+ T +LL+L +W
Sbjct: 1176 YEAMRSIRDDERFDRLPIIALTAKAMKDDREKCIQAGASDYITKPVHTEQLLSLM-RVWL 1234
Query: 154 RR 155
R
Sbjct: 1235 SR 1236
>gi|357490059|ref|XP_003615317.1| GATA transcription factor [Medicago truncatula]
gi|355516652|gb|AES98275.1| GATA transcription factor [Medicago truncatula]
Length = 286
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 470 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV--RKVNGVNVDLNGQPSS 527
REA+L++FRQKRKERCFDKK+RY R+ +A R R +GQF +K +G N Q SS
Sbjct: 134 HREASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKKGQFTTSKKQDGSNSCGTDQDSS 193
Query: 528 VD 529
D
Sbjct: 194 QD 195
>gi|406896020|gb|EKD40427.1| hypothetical protein ACD_75C00055G0002 [uncultured bacterium]
Length = 372
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
DLIL ++ +P G +MLK + +D+ L IPV+M++A+ E + VVK L GA DYL KP
Sbjct: 49 DLILLDIMMPEMDGFEMLKALKKDESLSHIPVLMLTAKSETASVVKALASGANDYLRKPF 108
Query: 140 RTNELLNLWTHMWRRRRM 157
E++ + R R +
Sbjct: 109 SEEEMVARVNTLLRNRYL 126
>gi|373459351|ref|ZP_09551118.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
gi|371721015|gb|EHO42786.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
Length = 388
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +IL D++ + + S L+ Y++ + S +Q ++ N+ D LIL +V +P
Sbjct: 4 KFKILAVDDNPINLKLLSSALINSDYEIYTASSGQQALELANSVLPD--LILLDVMMPDM 61
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL-LNLWTH 150
G ++ K + +K Q IPVI +SA++E K L LGA DYL KP E+ + TH
Sbjct: 62 DGYEVCKKLQENKNTQYIPVIFLSARNEAVDKAKGLALGAVDYLTKPFNPLEINARVRTH 121
Query: 151 MWRRRRMLGLAEKN 164
+ RR ++ L +N
Sbjct: 122 LTSRRAVIRLMREN 135
>gi|373458040|ref|ZP_09549807.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
gi|371719704|gb|EHO41475.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
Length = 461
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
++IL+ +++ S + LL K Y V+SV + + ++ E DL+LA++ LP
Sbjct: 1 MKILIIEDEKISRITLNDLLKKEGYDVSSVETGTEGLELFEREA--FDLVLADLRLPGAD 58
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G+++L+ + K R V++M+A V V+ L++GA DYL KP + LLN+ +
Sbjct: 59 GIEVLRQVKSKKP--RTVVVLMTAYGTVDTAVQALKMGAYDYLTKPFTPDHLLNILRNAE 116
Query: 153 RRRRML 158
+ +R+L
Sbjct: 117 KLQRVL 122
>gi|242049694|ref|XP_002462591.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
gi|241925968|gb|EER99112.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
Length = 123
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
+D +L+ D+ +L C+ QVT V P+Q ++ L+ E +D++LIL +
Sbjct: 1 MDTVAPHVLIVDDTFVDRLVASRVLKNCNIQVTIVEGPKQALEFLDVE-NDVNLILTDYC 59
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
+P G +L + +L+ IPV++MS+ + + KCL GA +Y++KP++ ++ +
Sbjct: 60 MPGMTGYDLLLEVKESPKLKHIPVVIMSSDNIPERMQKCLDAGAKEYIIKPIKAVDVPRI 119
Query: 148 WTHM 151
+++
Sbjct: 120 LSYI 123
>gi|409993016|ref|ZP_11276175.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
gi|409936121|gb|EKN77626.1| adenylate/guanylate cyclase [Arthrospira platensis str. Paraca]
Length = 352
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + D + L K Y V + + + + + + +DL+L ++ +P G
Sbjct: 8 VLIVDDNEINRDLLARRLQKQGYDVLVASNGFEALKIMRS--TPLDLVLLDIMMPQMNGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
++L+ + D +L+ IPVIM+SA +++ +V+C+ LGA DYL KP + H+ R
Sbjct: 66 QVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP---------FNHVLLR 116
Query: 155 RRMLGLAEK 163
R+ EK
Sbjct: 117 ARINACLEK 125
>gi|452959671|gb|EME65008.1| response regulator [Rhodococcus ruber BKS 20-38]
Length = 793
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL +++++ D + LL + V ++ + +E D L+L +V LP GL
Sbjct: 592 ILLVEDNADMRDHLVGLLTAQGWHVDVTADAESALERIRSELPD--LLLTDVMLPGRSGL 649
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+L+ + D+ L R+PVI+++A+ V+ LR GA DY+VKP +EL
Sbjct: 650 SLLQDVRDDERLARLPVILLTARAGSESAVEGLRAGADDYVVKPFHPSEL 699
>gi|347531560|ref|YP_004838323.1| diguanylate cyclase/phosphodiesterase [Roseburia hominis A2-183]
gi|345501708|gb|AEN96391.1| diguanylate cyclase/phosphodiesterase [Roseburia hominis A2-183]
Length = 868
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R +L +D + + + + Y++ + + LN E +D+IL ++ +P+ G
Sbjct: 724 RTMLVVDDQEVNRGLLKCIFEQQYRILEAENGADAFEVLNRESGKVDIILLDLAMPVMDG 783
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++ LK +D L IPVI+++A D ++ L+LGA DY+VKP
Sbjct: 784 MEFLKRKQQDAVLAGIPVIIITADDTTGHQIQMLQLGAEDYIVKPF 829
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNA--EGSDIDLILAEVDL 88
S+ ++L+ D DS ++K +Y++ + L + E I I+ ++ +
Sbjct: 3 SRDKVLIVD-DSELDRIALKKMLKDAYEIVEAVDGAGALRILESQKEFDAISAIILDLVM 61
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
P G + L+ + +RIPVI+ S + +V CL LGA D++ KP
Sbjct: 62 PQMDGFEFLREYRKVDSYRRIPVIVASVERDVKTEKACLALGARDFIGKP 111
>gi|312797149|ref|YP_004030071.1| transcriptional regulatory protein qseB [Burkholderia rhizoxinica
HKI 454]
gi|312168924|emb|CBW75927.1| Transcriptional regulatory protein qseB [Burkholderia rhizoxinica
HKI 454]
Length = 333
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 27 FIDRSKV---RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLIL 83
F+D V R+LL ++DS ++ V L + V V+ I L A+G DL+L
Sbjct: 106 FVDERTVGTMRVLLVEDDSMIAEGVRKALRADGWAVDWVQDGAAAI--LAADGEPYDLML 163
Query: 84 AEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNE 143
++ LP GL +LK + K + PV++++A+D V+ VK L GA DYLVKP +E
Sbjct: 164 LDLGLPQRDGLDVLKTVRAKKHV--FPVLIVTARDAVADRVKGLDAGADDYLVKPFDLDE 221
Query: 144 L 144
L
Sbjct: 222 L 222
>gi|449469793|ref|XP_004152603.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
gi|449511418|ref|XP_004163951.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
Length = 328
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 126 KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFA 173
>gi|379724474|ref|YP_005316605.1| protein DhkJ [Paenibacillus mucilaginosus 3016]
gi|378573146|gb|AFC33456.1| DhkJ [Paenibacillus mucilaginosus 3016]
Length = 1234
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D + A+ +LL QV + + ++ L E D DL+L ++ +P G
Sbjct: 1115 KVLIVDDDIRNVFALSNLLEGLDMQVAFAETGKGALEQLEKE-PDFDLVLMDIMMPEMDG 1173
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I D+ R+P+I ++A+ KC++ GA+DY+ KP+ T +LL+L +W
Sbjct: 1174 YEAMRSIRDDERFDRLPIIALTAKAMKDDREKCIQAGASDYITKPVHTEQLLSLM-RVWL 1232
Query: 154 RR 155
R
Sbjct: 1233 SR 1234
>gi|337286491|ref|YP_004625964.1| Fis family two component sigma-54 specific transcriptional
regulator [Thermodesulfatator indicus DSM 15286]
gi|335359319|gb|AEH45000.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Thermodesulfatator indicus DSM 15286]
Length = 447
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
SK RIL+ D+D DA F +L +C Y+V P + + L+ + D +L ++ +P
Sbjct: 2 SKPRILIIDDDPGIRDACFHVLTRCGYEVDMAARPGEALGLLSQ--YEFDAVLLDLRMPD 59
Query: 91 TKGLKMLKYITRDKELQRIP-VIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL-LNLW 148
GL +LK I KE+ + VI+++A V VK ++ GA D+L KP +EL L +
Sbjct: 60 INGLDLLKQI---KEIDPLTEVIIITAYGTVESAVKAMKNGACDFLEKPFNPDELKLAVE 116
Query: 149 THMWRRRRML 158
+ RRR L
Sbjct: 117 KALTRRRLAL 126
>gi|329958030|ref|ZP_08298432.1| response regulator receiver domain protein [Bacteroides clarus YIT
12056]
gi|328522049|gb|EGF49170.1| response regulator receiver domain protein [Bacteroides clarus YIT
12056]
Length = 119
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D + V + + Y + +P + ++ LN EG+ DLI++++ +P +G
Sbjct: 3 KILLVD-DKATIGRVLKIYLGTEYDLEYFENPLKALEWLN-EGNIPDLIISDIHMPHMRG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ + IPV+M+S+++ ++ L GAADY++KP EL
Sbjct: 61 NEFLYYLKGNELFRHIPVVMLSSEESTVERIQLLEAGAADYILKPFNPLEL 111
>gi|134100624|ref|YP_001106285.1| response regulator, two-component system [Saccharopolyspora
erythraea NRRL 2338]
gi|133913247|emb|CAM03360.1| response regulator, two-component system [Saccharopolyspora
erythraea NRRL 2338]
Length = 216
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL ++D +DA+ +L ++ T V DAL + DL+L ++ LP GL
Sbjct: 1 MLLVEDDDGVADALVDVLTAHGHRPTRVSRG---ADALTRH-REHDLVLLDLGLPDVDGL 56
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++L+ + R EL PVI+++A+ E VV+ LR GA DYLVKP+R ELL
Sbjct: 57 EVLRKLRRVAEL---PVIVLTARGEERSVVRGLRSGADDYLVKPVRMAELL 104
>gi|167752240|ref|ZP_02424367.1| hypothetical protein ALIPUT_00482 [Alistipes putredinis DSM 17216]
gi|167660481|gb|EDS04611.1| response regulator receiver domain protein [Alistipes putredinis
DSM 17216]
Length = 389
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+ + + + ++L K Y++ + R+ ++ + +E D LIL ++ +P G
Sbjct: 12 KILVVDDIATNVLLLKTILGKAGYRIVTATGGREALEKVESESPD--LILLDIMMPDMNG 69
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
++++ + D+ RIPVI +SA + +VK ++GA+DY+ KP EL+ H
Sbjct: 70 YEVIERLKADERFCRIPVIFLSALHDSENIVKGFKMGASDYVSKPFNHEELITRVAH 126
>gi|291288472|ref|YP_003505288.1| putative Fis family two component sigma-54 specific transcriptional
regulator [Denitrovibrio acetiphilus DSM 12809]
gi|290885632|gb|ADD69332.1| putative two component, sigma54 specific, transcriptional
regulator, Fis family [Denitrovibrio acetiphilus DSM
12809]
Length = 454
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RIL+ D+ ++ L K ++V ++ V++ L + DLI ++ L
Sbjct: 1 MRILVVDDQHAICHSMKKSLGKLGHKVATLEDGCLVVETLLT--TSFDLIFLDIKLGQEN 58
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G+ +LK I R + ++PVI+M+A +E + ++ ++ GAADY++KP N++ N+ +
Sbjct: 59 GIDILKQIKRMPSIGQVPVILMTAYNETDIAIESIKYGAADYILKPFDINDIENILLEVA 118
Query: 153 R 153
+
Sbjct: 119 K 119
>gi|222109842|ref|YP_002552106.1| histidine kinase [Acidovorax ebreus TPSY]
gi|221729286|gb|ACM32106.1| histidine kinase [Acidovorax ebreus TPSY]
Length = 1137
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL---NAEG-SDIDLILAEVDLPM 90
IL+ ++D + A+ S+L +V R+ R+ ++AL NA G S +DL+L ++ +P
Sbjct: 1014 ILVVEDDVRNVFALSSVLEPTGARVEIARNGREALEALERSNAAGESAVDLVLMDIMMPE 1073
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G + I R E +R+P+I ++A+ KCL GA DY+ KPL +LL+L
Sbjct: 1074 MDGFAAMAEIRRRPEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSL-VR 1132
Query: 151 MW 152
+W
Sbjct: 1133 VW 1134
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ ++D+ ++V LL ++ + RQ +D L +GS D ++ ++ LP G
Sbjct: 867 RVLVVEDDARQRESVHHLLATDGVEIVGAATARQALDLL--KGSTFDCVVMDLHLPDLNG 924
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL----NLWT 149
++L+ + +E+ PVI+ + ++ + LR + ++K R+ E L L+
Sbjct: 925 YELLQQMAEQEEVSFPPVIVYTGRNLSRDEEQQLRRFSKSIIIKDARSPERLLDEVTLFL 984
Query: 150 HMWR------RRRMLGLA 161
H RRRML LA
Sbjct: 985 HQVESTLPDDRRRMLQLA 1002
>gi|218440688|ref|YP_002379017.1| GAF sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
gi|218173416|gb|ACK72149.1| GAF sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
Length = 1964
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D + A+ SLL + QV + I L +DIDL+L +V +P G
Sbjct: 1846 KVLIVDDDVRNIFALTSLLERYQMQVIPAENGAAGIACLQ-NSTDIDLVLMDVMMPGMDG 1904
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
+ +K I + ++ Q +P+I ++A+ KCL GA+DY+ KP+ T +LL++
Sbjct: 1905 YETMKAIRKLQQFQSLPIIALTAKAMKGDRDKCLDAGASDYITKPVDTEQLLSI 1958
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS------------- 77
S+ +L D+ + LL SYQVT+V S + ++ L +
Sbjct: 8 SRFHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSSPDHQEI 67
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D++LI+ + +P G +LK + L+ IPV++MS+++ + + +CL+ GA ++ +K
Sbjct: 68 DVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLK 127
Query: 138 PLRTNELLNLWTHMWRRRR 156
P++ ++ L +H+ +R++
Sbjct: 128 PVKLADMKKLKSHLLKRKQ 146
>gi|121593072|ref|YP_984968.1| multi-sensor hybrid histidine kinase [Acidovorax sp. JS42]
gi|120605152|gb|ABM40892.1| multi-sensor hybrid histidine kinase [Acidovorax sp. JS42]
Length = 1137
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL---NAEG-SDIDLILAEVDLPM 90
IL+ ++D + A+ S+L +V R+ R+ ++AL NA G S +DL+L ++ +P
Sbjct: 1014 ILVVEDDVRNVFALSSVLEPTGARVEIARNGREALEALERSNAAGESAVDLVLMDIMMPE 1073
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G + I R E +R+P+I ++A+ KCL GA DY+ KPL +LL+L
Sbjct: 1074 MDGFAAMAEIRRRPEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSL-VR 1132
Query: 151 MW 152
+W
Sbjct: 1133 VW 1134
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ ++D+ ++V LL ++ + RQ +D L +GS D ++ ++ LP G
Sbjct: 867 RVLVVEDDARQRESVHHLLATDGVEIVGAATARQALDLL--KGSTFDCVVMDLHLPDLNG 924
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL----NLWT 149
++L+ + +E+ PVI+ + ++ + LR + ++K R+ E L L+
Sbjct: 925 YELLQQMAEQEEVSFPPVIVYTGRNLSRDEEQQLRRFSKSIIIKDARSPERLLDEVTLFL 984
Query: 150 HMWR------RRRMLGLA 161
H RRRML LA
Sbjct: 985 HQVESTLPDDRRRMLQLA 1002
>gi|95929451|ref|ZP_01312194.1| response regulator receiver protein [Desulfuromonas acetoxidans DSM
684]
gi|95134567|gb|EAT16223.1| response regulator receiver protein [Desulfuromonas acetoxidans DSM
684]
Length = 129
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K +IL+ D++ NS + LL + Y T V + +D L E ++++L+++ +P
Sbjct: 4 AKYKILVVDDEENSRVCLGKLLTQAGYDATCVSGGHEALDYL--EHHPVNIVLSDIRMPD 61
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
GL +L I R V+M++A EV ++ + LGA D++ KP+R NEL
Sbjct: 62 MDGLSLLNEIHEHYPETR--VVMVTAHGEVETYLEAVNLGACDFVHKPVRFNEL 113
>gi|451819198|ref|YP_007455399.1| Two component transcriptional regulator, winged helix family
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451785177|gb|AGF56145.1| Two component transcriptional regulator, winged helix family
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 225
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
IL+ ++D + ++L+K Y+ T V + ++AL+ E IDLIL+++ +P G
Sbjct: 3 HILIVEDDKELCELFSAVLLKNGYKTTCVNDGIEALNALDKEY--IDLILSDIMMPNMDG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+++K I RD + +PV+M++A++ + + LG DY++KP+ NE++ + R
Sbjct: 61 FELIKSI-RDAQFN-LPVLMITAKESFQDIKRGFSLGIDDYMIKPINVNEMVLRVGALLR 118
Query: 154 RRRMLG----LAEKNILSYD 169
R +++ K +L YD
Sbjct: 119 RAKIINEKKQYVGKTLLEYD 138
>gi|427382334|ref|ZP_18879054.1| hypothetical protein HMPREF9447_00087 [Bacteroides oleiciplenus YIT
12058]
gi|425729579|gb|EKU92430.1| hypothetical protein HMPREF9447_00087 [Bacteroides oleiciplenus YIT
12058]
Length = 119
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D D S V S+ + Y P + ID L EG++ DLI++++ +P G
Sbjct: 3 QILLVD-DKASIGKVLSMYLGKEYDFVYCEDPLKAIDWLQ-EGNEPDLIISDIRMPKMTG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L ++ ++ + IPV+M+S+++ + ++ L GA DY++KP EL
Sbjct: 61 SEFLHFLKSNELFKHIPVMMLSSEESTTERIRLLEEGAVDYILKPFNPMEL 111
>gi|381151411|ref|ZP_09863280.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
gi|380883383|gb|EIC29260.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
Length = 450
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D+D D + +L + Y VT Q ++A+ E DL++++V +P +G
Sbjct: 7 RLLVIDDDPGVVDYLLEMLRQQGYSVTGCTQTGQALEAIEKE--PFDLVVSDVVMPGMRG 64
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L+++ I R + Q V++++A + + ++ +R GA D+L KP R EL T +
Sbjct: 65 LELMAAIHRKRPEQL--VLLITAFGSIDLAIQSMRAGACDFLTKPFRIEELYAAVTRAFE 122
Query: 154 RRRM 157
R+M
Sbjct: 123 DRQM 126
>gi|186475955|ref|YP_001857425.1| two component transcriptional regulator [Burkholderia phymatum
STM815]
gi|184192414|gb|ACC70379.1| two component transcriptional regulator, winged helix family
[Burkholderia phymatum STM815]
Length = 248
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D+D + + V + L + + T RQ+ AL AE D LI+ ++ LP GL
Sbjct: 7 VLIVDDDRDIRELVGTYLTRNGVRATLASGGRQMRAALAAERPD--LIVLDLMLPGESGL 64
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ + + R E Q +P++M++A E + V L +GA DYL KP ELL + RR
Sbjct: 65 DLCREL-RAGEFQTVPILMLTALSEETDRVVGLEMGADDYLAKPFAVRELLARIRAILRR 123
Query: 155 RRML 158
RM+
Sbjct: 124 SRMM 127
>gi|71909509|ref|YP_287096.1| response regulator receiver [Dechloromonas aromatica RCB]
gi|71849130|gb|AAZ48626.1| Response regulator receiver [Dechloromonas aromatica RCB]
Length = 121
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+ +L K YQV++ + + I A+ + DLIL +V +P G
Sbjct: 6 ILVVDDSPTERFFTVDVLTKAGYQVSTAETGEEGI--AKAKATKPDLILMDVVMPGLNGY 63
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ + +TRD+E + IP+I+ +++ + + + LR GA DYLVKPL ELL
Sbjct: 64 QATRTLTRDEETKGIPIIVCTSKGQETDKIWGLRQGAIDYLVKPLNPEELL 114
>gi|406040665|ref|ZP_11048020.1| 2-component regulatory protein [Acinetobacter ursingii DSM 16037 =
CIP 107286]
Length = 231
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RIL ++D + + L +++ ++ + +D L G ++L ++ LP +
Sbjct: 5 IRILYIEDDLMVGKSTYQLFQHEKFEIDWAKTGLEALDYLF--GQTYHIVLLDLGLPELE 62
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
GL++LK+I + ++ ++ VI++SA+D+ ++ LRLGA DY+VKP +EL+
Sbjct: 63 GLEVLKHIRKQVDMNKMGVIIISARDQSRDKIQGLRLGADDYIVKPYDFDELI 115
>gi|411118667|ref|ZP_11391047.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410710530|gb|EKQ68037.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 351
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D+ + D + L + ++VT + R+ + + + DLIL ++ +P G
Sbjct: 8 LLVVDDMEANRDLLTRRLQRQGHKVTVATNGREALGLIKQQ--SFDLILCDIMMPEMDGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D L+ IPVIM+SA D++ VV+C+ LGA DYL KP
Sbjct: 66 QVLEELKADPGLRHIPVIMISALDDMESVVRCIELGAEDYLFKPF 110
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L +DS A+ S L++ S YQVT+V S ++ ++ L+ E ++ +I+ + +P G
Sbjct: 9 VLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSLE-REVHMIITDYCMPEMTGY 67
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
++LK + EL+ IPV++MS+++ + + +CL GA ++L+KP+R +++ L + +
Sbjct: 68 ELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEEFLIKPVRPSDVSRLCSLLL 125
>gi|420240840|ref|ZP_14745028.1| signal transduction histidine kinase [Rhizobium sp. CF080]
gi|398074506|gb|EJL65649.1| signal transduction histidine kinase [Rhizobium sp. CF080]
Length = 2101
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL D+D+ + A+ S+L + +V + + + ID + E + + ++L ++ +P G
Sbjct: 1983 VLLVDDDARNIFALSSVLERRGMRVLTATTGSEAIDVIQREHA-VAIVLMDIMMPGMDGY 2041
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN---LWTH 150
+ ++ I D +R+P++ ++A+ KCL GA+DYL KP+ T +LL+ +W H
Sbjct: 2042 ETMQVIRSDPRFRRLPILALTAKAMKGDREKCLEAGASDYLAKPVNTEQLLSALRMWLH 2100
>gi|354805233|gb|AER41648.1| CCT+motif+family+protein [Oryza punctata]
Length = 259
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
G S + + + + REA L+++++KRK+RC++K+IRY +RK AE RPRVRG+F ++
Sbjct: 176 GESLNPNIVVGAMVEREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPK 235
Query: 516 GVNVDLNGQPSSVD 529
V L PS+ D
Sbjct: 236 AVAPPLP-PPSTYD 248
>gi|145225002|ref|YP_001135680.1| multi-sensor signal transduction histidine kinase [Mycobacterium
gilvum PYR-GCK]
gi|145217488|gb|ABP46892.1| PAS/PAC sensor hybrid histidine kinase [Mycobacterium gilvum
PYR-GCK]
Length = 1361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 18 GNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGS 77
G K G G + R+L+ D++++ + + LL Y V +V Q ++A+ AE
Sbjct: 593 GPEKPIGTGTL----ARVLVADDNADMREYLGRLLRSDGYAVEAVVDGWQALEAIRAEPP 648
Query: 78 DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVK 137
D L++++V +P GL ++ + D+ +PV+++SA+ + L+ GA DYLVK
Sbjct: 649 D--LVISDVMMPRLDGLGLVAELRADRRTAAVPVLLLSARAGQEASISGLQAGADDYLVK 706
Query: 138 PLRTNELL 145
P ELL
Sbjct: 707 PFAAAELL 714
>gi|386842950|ref|YP_006248008.1| two-component system response regulator [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374103250|gb|AEY92134.1| two-component system response regulator [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
Length = 266
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+ +R+LL ++D++ + A+ ++L K +QVT RS + + AL EG+ ++L ++ LP
Sbjct: 37 AGMRLLLVEDDNHVAAALSAVLAKHGFQVTHARSGEEALQALVPEGNGFGVVLLDLGLPD 96
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++ I ++ PVIM++A+ +V + L LGA DY+VKP T ELL
Sbjct: 97 QDGYEVCGKI---RKRTSTPVIMVTARSDVRSRIHGLNLGADDYVVKPYDTGELL 148
>gi|354805146|gb|AER41567.1| CCT+motif+family [Oryza australiensis]
Length = 245
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 515
G S + + + + REA L+++++KRK+RC++K+IRY +RK AE RPRVRG+F + +
Sbjct: 161 GESLNPNIVVGAMVEREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKVPD 220
Query: 516 GVNVDLNGQPSSVD 529
L PS+ D
Sbjct: 221 QAVAPLLPPPSTYD 234
>gi|255691484|ref|ZP_05415159.1| putative two-component system response regulator [Bacteroides
finegoldii DSM 17565]
gi|260622875|gb|EEX45746.1| response regulator receiver domain protein [Bacteroides finegoldii
DSM 17565]
Length = 121
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K +ILL D D + V S+ + Y T P + I+ LN EG+ DLI++++ +P+
Sbjct: 2 KKKILLVD-DKATIGKVASVYLGKDYDFTYREDPIKAIEWLN-EGNIPDLIISDIRMPLM 59
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G + L+Y+ ++ + IP++M+S+++ + ++ L GA DY++KP EL
Sbjct: 60 TGDEFLRYMKNNELFKSIPIVMLSSEESTTERIRLLEEGAEDYILKPFNPLEL 112
>gi|443314811|ref|ZP_21044341.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442785579|gb|ELR95389.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 517
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
+++IL D+D ++ LL + + ++ +P Q+ D L +E D L++ +VD+P
Sbjct: 385 EIKILAVDDDPLILKSLQHLLPRWGLHLITLNNPLQLWDTLASEMPD--LLILDVDMPQG 442
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
G+++ ++I + IP++ ++A E ++VK GA DY+ KP E++ +
Sbjct: 443 SGIELCRFIRDNDIWNGIPILFLTAHREAEMIVKMYSAGADDYIAKPFTEPEIITRIFNR 502
Query: 152 WRRRRML 158
+R R+L
Sbjct: 503 LKRNRLL 509
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RILL D+D + + L SY V D A + DLI+ +++LP
Sbjct: 1 MRILLVDDDELLTQRLAEFLASHSYAVDIALDGEAGWDYTQA--AIYDLIVLDINLPKLD 58
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G+++ + + R+K P+++++A+ + S V L GA DYLVKP EL
Sbjct: 59 GVRLCQKLRRNK--YNSPILLLTAKGDSSDKVMGLDAGADDYLVKPCTLEEL 108
>gi|293611009|ref|ZP_06693308.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135884|ref|YP_004996534.1| twitching motility protein [Acinetobacter calcoaceticus PHEA-2]
gi|427423741|ref|ZP_18913882.1| response regulator receiver domain protein [Acinetobacter baumannii
WC-136]
gi|292826661|gb|EFF85027.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123329|gb|ADY82852.1| twitching motility protein [Acinetobacter calcoaceticus PHEA-2]
gi|425699401|gb|EKU69016.1| response regulator receiver domain protein [Acinetobacter baumannii
WC-136]
Length = 120
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D+ + +L K Y V + + AE D L+L +V +P G
Sbjct: 3 RILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPD--LVLMDVVMPGVNG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
+ + ITRD++ + IPV+++S +D+ + V R GA DYL+KP+ N+L+++
Sbjct: 61 FQATRQITRDEDTKHIPVVIVSTKDQATDRVWGKRQGAIDYLIKPIEENQLIDV 114
>gi|359800570|ref|ZP_09303110.1| multi-sensor hybrid histidine kinase [Achromobacter arsenitoxydans
SY8]
gi|359361466|gb|EHK63223.1| multi-sensor hybrid histidine kinase [Achromobacter arsenitoxydans
SY8]
Length = 1137
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLPM 90
+L+ ++D + A+ S+L V R+ R+ ++AL G+D IDL+L ++ +P
Sbjct: 1014 VLVVEDDVRNVFALSSILEPTGLHVEIARNGREALEALGRAGADGHRAIDLVLMDIMMPE 1073
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G ++ I + +R+P+I ++A+ KCL GA DY+ KPL LL+L
Sbjct: 1074 MDGYTAMREIRARPDWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVERLLSL-VR 1132
Query: 151 MWRRR 155
+W R+
Sbjct: 1133 VWMRK 1137
>gi|125547838|gb|EAY93660.1| hypothetical protein OsI_15446 [Oryza sativa Indica Group]
Length = 380
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 36 LLCDNDSNSSDAVFSLL-VKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D D +D+ S++ + ++ VT SP + +D L + + L+LA+V + G
Sbjct: 15 MVIDEDKCHADSTCSMICTQLNFCVTVFTSPIKALDFLQNQAEGVHLVLADVQMEEMNGF 74
Query: 95 KMLKYITRDKELQR-IPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+ LK +EL + I VIMMS + + + +C++LGA + KPL + NLW H+
Sbjct: 75 EFLKVA---RELHKSIQVIMMSTETTIYTMKRCVQLGAQILVKKPLDVVTIQNLWQHL 129
>gi|423013985|ref|ZP_17004706.1| multi-sensor hybrid histidine kinase [Achromobacter xylosoxidans
AXX-A]
gi|338782916|gb|EGP47285.1| multi-sensor hybrid histidine kinase [Achromobacter xylosoxidans
AXX-A]
Length = 1137
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLPM 90
+L+ ++D + A+ S+L +V R+ R+ ++AL+ G D IDL+L ++ +P
Sbjct: 1014 VLVVEDDVRNVFALSSILEPTGLRVEIARNGREALEALDRVGVDGHPVIDLVLMDIMMPE 1073
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G ++ I E +R+P+I ++A+ KCL GA DY+ KPL LL+L
Sbjct: 1074 MDGYTAMREIRTRPEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVERLLSL-VR 1132
Query: 151 MWRRR 155
+W R+
Sbjct: 1133 VWMRK 1137
>gi|373488359|ref|ZP_09579024.1| response regulator receiver [Holophaga foetida DSM 6591]
gi|372006684|gb|EHP07316.1| response regulator receiver [Holophaga foetida DSM 6591]
Length = 372
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ D+ + +L + ++V S + + L E +DLIL+++ +P G
Sbjct: 25 RVLVVDDQEIVRIMLIKILQRNGFEVLEAASGPETLTLLERE--RVDLILSDIKMPGMNG 82
Query: 94 LKMLKYITRDKELQRIP---VIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
++++K I RIP ++M+S+ D V + ++CLRLGA Y++KP +TN +L +
Sbjct: 83 IELVKAIQ-----PRIPETSIVMVSSLDNVEMSMECLRLGAYGYVLKPFKTNGILVAVAN 137
Query: 151 MWRRRRM 157
RRR +
Sbjct: 138 ALRRRML 144
>gi|37676593|ref|NP_936989.1| signal transduction histidine kinase [Vibrio vulnificus YJ016]
gi|37201136|dbj|BAC96959.1| signal transduction histidine kinase [Vibrio vulnificus YJ016]
Length = 1381
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D + A+ S+L + R + +D L E DID++L ++ +P G
Sbjct: 1263 KVLLVDDDMRNVFALSSILEDKGMDIVIARDGLESLDKLK-ENPDIDVVLMDIMMPKMDG 1321
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
+ ++ I + K +++PVI ++A+ KC+ GA+DYL KP+ T++LL++ +W
Sbjct: 1322 YEAMEEIRKQKVYEKLPVIALTAKAMKGDRSKCIEAGASDYLAKPVNTDKLLSML-RVW 1379
>gi|158319376|ref|YP_001511883.1| two component transcriptional regulator [Alkaliphilus oremlandii
OhILAs]
gi|158139575|gb|ABW17887.1| two component transcriptional regulator, winged helix family
[Alkaliphilus oremlandii OhILAs]
Length = 224
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDI-DLILAEVDLPMT 91
+++LL +++ + ++A+ +L K Y V V + D L+ + I D+I+ ++ LP
Sbjct: 1 MKVLLVEDEKHLAEALLQILKKNKYTVDGVYNGE---DGLDYALTGIYDVIILDIMLPKL 57
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
GL++LK I + K PV++++A+ EVS VK L LGA DYL KP T ELL +
Sbjct: 58 SGLEILKSIRKKK--ISTPVLLLTAKSEVSDRVKGLDLGADDYLPKPFSTEELLARLRAL 115
Query: 152 WRRR 155
RR+
Sbjct: 116 TRRK 119
>gi|186685124|ref|YP_001868320.1| multi-component transcriptional regulator [Nostoc punctiforme PCC
73102]
gi|186467576|gb|ACC83377.1| multi-component transcriptional regulator, winged helix family
[Nostoc punctiforme PCC 73102]
Length = 787
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
L K + + + + S F KV +L+ D+D A+ +L ++T + P +
Sbjct: 475 LLKPVAASQVWETASQILQFTRSLKVNVLVVDDDPLILAALGPMLEPWGMRITGLDDPLR 534
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
+ L + D L++ +V++P G+++ + + D + Q +P++ ++A E+ V +
Sbjct: 535 FWEVLQSTAPD--LLILDVEMPHISGIELCQAVRTDPQWQELPIVFLTAHREMETVQQVF 592
Query: 128 RLGAADYLVKPLRTNELLNLWTHMWRRRRML 158
G DY+VKP+ ELL TH R R+L
Sbjct: 593 AAGGDDYVVKPVVGAELLARITHRLERSRLL 623
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RILL ++D + + L + Y V + I A+ ++ DLIL +V LP
Sbjct: 1 MRILLIEDDEVLASVLLQSLTQQHYAVEIAEDGQ--IGWEYAQATNYDLILTDVVLPKLD 58
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
G+ + + + + P+++++A+DE S ++ L GA DYL+KPL EL
Sbjct: 59 GITLCQRLRSNG--CSTPILLITAKDETSDRIRGLDAGADDYLIKPLNLREL 108
>gi|148240606|ref|YP_001225993.1| hybride histidine kinase [Synechococcus sp. WH 7803]
gi|147849145|emb|CAK24696.1| Possible hybride histidine kinase [Synechococcus sp. WH 7803]
Length = 344
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K R+L+ D+++++ D + + L + + V++ + ++ + DLIL +V +P
Sbjct: 110 KGRVLVVDDNASNRDLLVAALSRQGHVVSTAEDGEIAVSSVKEKP--FDLILLDVQMPRL 167
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKP 138
G ++L+Y+ + + IPVIM+S D++ VV++C+ GA DYL KP
Sbjct: 168 NGEQVLEYLKANDQFSMIPVIMISGLDDIDVVIRCIDCGADDYLPKP 214
>gi|442317706|ref|YP_007357727.1| Hybrid signal transduction histidine kinase J [Myxococcus stipitatus
DSM 14675]
gi|441485348|gb|AGC42043.1| Hybrid signal transduction histidine kinase J [Myxococcus stipitatus
DSM 14675]
Length = 1700
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D + A+ ++L + V S R+ +D L A DI+L+L +V +P G
Sbjct: 1555 KVLVVDDDVRNIFALNTVLERYGMTVAFAESAREGLDLL-ARDLDIELVLMDVMMPEMDG 1613
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ I + + +P++ ++A+ KCL GA+DY+ KP+ ++LL+L W H
Sbjct: 1614 YQAMRAIRSMERVAHLPILALTAKAMKGDREKCLEAGASDYITKPVDIDQLLSLLRVWLH 1673
Query: 151 MWRRRRMLGLAEKNI 165
R R G A +++
Sbjct: 1674 APRGGRRAGPAPRDV 1688
>gi|395776028|ref|ZP_10456543.1| two-component system regulator [Streptomyces acidiscabies 84-104]
Length = 228
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL ++D++ + A+ ++L + + VT RS + + AL EG ++L ++ LP
Sbjct: 1 MRLLLVEDDNHVAAALSAVLRRHGFDVTHARSGEEALQALVPEGPGFGVVLLDLGLPDQD 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++ I ++ PVIM++A+ +V + L LGA DY+VKP T ELL
Sbjct: 61 GYEVCGKI---RKRTATPVIMVTARSDVRSRIHGLNLGADDYVVKPYDTGELL 110
>gi|356508044|ref|XP_003522772.1| PREDICTED: GATA transcription factor 24-like isoform 2 [Glycine
max]
Length = 325
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 122 KRSNLSRRIASLVRFREKRKERCFDKKIRYSVRKEVAQRMHRKNGQFA 169
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+L D DS + + L C Y VT+ + + L DL++A+V LP
Sbjct: 12 MRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHLPDMD 71
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
GLK+L+ + + +L V+M+S + +V+K + GA+D+LVKP+R EL +W H+
Sbjct: 72 GLKLLELVELETDLP--VVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIWQHVI 129
Query: 153 RRRR 156
R+++
Sbjct: 130 RKKK 133
>gi|255563366|ref|XP_002522686.1| hypothetical protein RCOM_0886650 [Ricinus communis]
gi|223538162|gb|EEF39773.1| hypothetical protein RCOM_0886650 [Ricinus communis]
Length = 313
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 451 SWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 510
++ S G+S ++ + +K+ RR A+L++FR+KRKERCF+KKIRY RK +A+R R GQF
Sbjct: 59 TFQSLGDSDTS--RESKLSRRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQF 116
Query: 511 V 511
Sbjct: 117 A 117
>gi|255572874|ref|XP_002527369.1| GATA transcription factor, putative [Ricinus communis]
gi|223533288|gb|EEF35041.1| GATA transcription factor, putative [Ricinus communis]
Length = 327
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 464 KMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 124 KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFA 171
>gi|406946398|gb|EKD77619.1| hypothetical protein ACD_42C00267G0001 [uncultured bacterium]
Length = 226
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL ++D D ++S L + V V+ + +AL+ + + D+++ ++ LP
Sbjct: 1 MRVLLVEDDELLGDGIYSGLKHYGHTVDWVKDGKSAYEALSRKQENFDVVVLDLGLPKMS 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
GL +LK I R+K + +PV++++A+D V V+ L GA DYL+KP +EL
Sbjct: 61 GLDILKRI-REKNIP-VPVLILTAKDTVESRVQGLDAGADDYLLKPFDLDEL 110
>gi|153869728|ref|ZP_01999264.1| Repressor protein luxO [Beggiatoa sp. PS]
gi|152073809|gb|EDN70739.1| Repressor protein luxO [Beggiatoa sp. PS]
Length = 509
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+LL ++ + +LL K +T V++ + +D L E + IL ++ LP G+
Sbjct: 39 VLLVEDQQPFAVTCQALLKKEPVTLTHVKTGKDALDFL--EETIPSAILLDLGLPDMNGM 96
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++LK++T+ K IPVI+M+AQ+ V++VV+ +R GA D+L KP + N LL
Sbjct: 97 EILKHVTKQK--LGIPVIVMTAQNAVNIVVEAMRCGAFDFLEKPFQHNRLL 145
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+R+LL + DS+S+ + L Y V++ + + AL++ + + EV +
Sbjct: 18 LRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGFHVAIVEVSTSCSL 77
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
G K++ K+L P IM S ++ ++KC+ LGA ++L KPL ++L N+W H+
Sbjct: 78 G--GFKFLENSKDL---PTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHVV 132
Query: 153 RRRRMLGLAEKNILS 167
+ G N+LS
Sbjct: 133 HKAFNAG---ANVLS 144
>gi|27366816|ref|NP_762343.1| signal transduction histidine kinase [Vibrio vulnificus CMCP6]
gi|27358383|gb|AAO07333.1|AE016809_95 Signal transduction histidine kinase [Vibrio vulnificus CMCP6]
Length = 1370
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D + A+ S+L + R + +D L E DID++L ++ +P G
Sbjct: 1252 KVLLVDDDMRNVFALSSILEDKGMDIVIARDGVESLDKLK-ENPDIDVVLMDIMMPKMDG 1310
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
+ ++ I + K +++PVI ++A+ KC+ GA+DYL KP+ T++LL++ +W
Sbjct: 1311 YEAMEEIRKQKVYEKLPVIALTAKAMKGDRSKCIEAGASDYLAKPVNTDKLLSML-RVW 1368
>gi|320158700|ref|YP_004191078.1| signal transduction histidine kinase [Vibrio vulnificus MO6-24/O]
gi|319934012|gb|ADV88875.1| signal transduction histidine kinase [Vibrio vulnificus MO6-24/O]
Length = 1370
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++LL D+D + A+ S+L + R + +D L E DID++L ++ +P G
Sbjct: 1252 KVLLVDDDMRNVFALSSILEDKGMDIVIARDGVESLDKLK-ENPDIDVVLMDIMMPKMDG 1310
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 152
+ ++ I + K +++PVI ++A+ KC+ GA+DYL KP+ T++LL++ +W
Sbjct: 1311 YEAMEEIRKQKVYEKLPVIALTAKAMKGDRSKCIEAGASDYLAKPVNTDKLLSML-RVW 1368
>gi|315649484|ref|ZP_07902569.1| multi-sensor hybrid histidine kinase [Paenibacillus vortex V453]
gi|315274957|gb|EFU38332.1| multi-sensor hybrid histidine kinase [Paenibacillus vortex V453]
Length = 1219
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D+D + A+ S+L + +VT + R+ I+ L + D DL+L ++ +P G
Sbjct: 1100 KILLVDDDIRNVFALSSVLEGYNMEVTFAENGREAIELLQ-DNPDYDLVLMDMMMPEMDG 1158
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ + E +++P+I ++A+ KC+ GA+DY+ KP++T +LL+L W +
Sbjct: 1159 YEAMRLLREMPEFEKLPIIALTAKAMKEDRAKCIEAGASDYMKKPIQTEQLLSLMRVWLY 1218
>gi|119487004|ref|ZP_01620876.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
gi|119455933|gb|EAW37067.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
Length = 355
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + D + + + YQV + + ++ + ++ +DL+L ++ +P G
Sbjct: 10 VLIVDDNEVNRDLLARRITREGYQVMLASNGFEALEMMRSQ--PLDLVLLDIMMPQMNGY 67
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D+ L+ IP+IM+SA +++ VV+C+ LGA DYL KP
Sbjct: 68 QVLEAVKADQSLRYIPMIMISAVNDIESVVRCIELGAEDYLSKPF 112
>gi|423283946|ref|ZP_17262830.1| hypothetical protein HMPREF1204_02368 [Bacteroides fragilis HMW
615]
gi|404580492|gb|EKA85201.1| hypothetical protein HMPREF1204_02368 [Bacteroides fragilis HMW
615]
Length = 121
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+++L +D + V S+ + Y + P ++ L+ EG DLI++++ +P+ +G
Sbjct: 3 KLILLVDDKETIAKVASIYLGKDYDIQYFPDPIHALEWLH-EGKTPDLIISDIRMPLMRG 61
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
+ L Y+ ++ L+ IPVIM+S+++ S ++ L+ GA DY++KP EL
Sbjct: 62 DEFLHYLKCNELLKDIPVIMLSSEESTSERIRLLQEGAVDYILKPFNPMEL 112
>gi|218437977|ref|YP_002376306.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. PCC 7424]
gi|218170705|gb|ACK69438.1| response regulator receiver modulated diguanylate cyclase
[Cyanothece sp. PCC 7424]
Length = 353
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
I +SK IL+ D+ + + +F L + Y+V V S +Q + + A+ D LIL +V
Sbjct: 5 IAQSKGDILIVDDIPENLEILFKTLQEQGYEVRRVLSGQQALMVVEADPPD--LILLDVK 62
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
+P G ++ +++ ++ +IPVI +SA EV VK R+G DY+ KP E+L+
Sbjct: 63 MPHIDGYEVCRHLKAQEKTAQIPVIFLSALHEVFDKVKAFRVGGVDYITKPFHLEEVLS 121
>gi|428319185|ref|YP_007117067.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428242865|gb|AFZ08651.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 352
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + D + L + + VT Q ++ L + DL+L ++ +P G
Sbjct: 8 VLVVDDNEVNRDLLARRLQRQGHVVTVAEDGLQALEMLRRD--PFDLVLLDIMMPQMNGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
++L+ + D+ L+ IPVIM+SA D++ +V+C+ LGA DYL KP
Sbjct: 66 QVLESLKADENLRYIPVIMISAVDDIDSIVRCIELGAEDYLSKPF 110
>gi|359477769|ref|XP_002282082.2| PREDICTED: uncharacterized protein LOC100242670 [Vitis vinifera]
Length = 520
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 468 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSS 527
V++R+ + ++ +KR ER F KKI+Y RK LA+ RPRVRG+F + N D P +
Sbjct: 419 VEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK-----NDDFGEAPRA 473
Query: 528 VDYDEDEDEEEEMASRD 544
DED+EE+M ++
Sbjct: 474 SGGHHDEDDEEDMGMKE 490
>gi|363892596|ref|ZP_09319760.1| hypothetical protein HMPREF9630_01838 [Eubacteriaceae bacterium
CM2]
gi|402837795|ref|ZP_10886310.1| transcriptional regulatory protein YycF [Eubacteriaceae bacterium
OBRC8]
gi|361963682|gb|EHL16749.1| hypothetical protein HMPREF9630_01838 [Eubacteriaceae bacterium
CM2]
gi|402274226|gb|EJU23410.1| transcriptional regulatory protein YycF [Eubacteriaceae bacterium
OBRC8]
Length = 232
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 30 RSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLP 89
+ KV +L+ +++ N SD + LVK +Y+VT ++ +D A D D++L ++ LP
Sbjct: 2 KDKVCVLIIEDEKNISDILKFNLVKENYEVTQRFDGKEGLDT--ALEKDFDIVLLDIMLP 59
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
G ++ K I +E + +P+IM++A++E + L LGA DY+ KP T E++
Sbjct: 60 SMDGFEICKKI---REHKTVPIIMLTAKEEEVDKILGLELGADDYITKPFSTREVIARVK 116
Query: 150 HMWRRRRML 158
RR ML
Sbjct: 117 ANVRRVEML 125
>gi|374316722|ref|YP_005063150.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
gi|359352366|gb|AEV30140.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
Length = 341
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
I+ D+D + LL K YQVT + +++D L E IDLIL ++ +P G
Sbjct: 4 HIVTTDDDPAIRKILQILLKKEGYQVTLCTNGNELLDLLKTESESIDLILLDIKMPGPSG 63
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
++L+ I IPV+M++A ++ +K +RLGA+DYL KP+ L++
Sbjct: 64 FEVLESIRH--RYPSIPVVMLTAFSDLDTGMKAMRLGASDYLAKPVLREALIS 114
>gi|391231317|ref|ZP_10267523.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
gi|391220978|gb|EIP99398.1| serine phosphatase RsbU, regulator of sigma subunit [Opitutaceae
bacterium TAV1]
Length = 502
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ D++ + D + L + + V + + ++ L A DL+L ++ +P+ G
Sbjct: 118 RILVVDDNEGNRDMLSRQLERQGHAVATAADGQAALERLRA--GPFDLVLLDMMMPVLDG 175
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
L I D L+ +PVIM+SA DE++ VV+C+ GA D+L KP
Sbjct: 176 YGALDAIKTDPVLRHLPVIMISALDELASVVRCIERGAEDFLPKPF 221
>gi|363890379|ref|ZP_09317717.1| hypothetical protein HMPREF9628_00480 [Eubacteriaceae bacterium
CM5]
gi|363893488|ref|ZP_09320586.1| hypothetical protein HMPREF9629_00100 [Eubacteriaceae bacterium
ACC19a]
gi|361963792|gb|EHL16858.1| hypothetical protein HMPREF9629_00100 [Eubacteriaceae bacterium
ACC19a]
gi|361965823|gb|EHL18794.1| hypothetical protein HMPREF9628_00480 [Eubacteriaceae bacterium
CM5]
Length = 232
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 30 RSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLP 89
+ KV +L+ +++ N SD + LVK +Y+VT ++ +D A D D++L ++ LP
Sbjct: 2 KDKVCVLIIEDEKNISDILKFNLVKENYEVTQRFDGKEGLDT--ALEKDFDIVLLDIMLP 59
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
G ++ K I +E + +P+IM++A++E + L LGA DY+ KP T E++
Sbjct: 60 SMDGFEICKKI---REHKTVPIIMLTAKEEEVDKILGLELGADDYITKPFSTREVIARVK 116
Query: 150 HMWRRRRML 158
RR ML
Sbjct: 117 ANVRRVEML 125
>gi|254412501|ref|ZP_05026275.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180811|gb|EDX75801.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 650
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K +L+ D+ + + + L + YQV V + I A A+ + DLIL ++ +P
Sbjct: 2 TKGNLLIVDDTPENLQVLSATLSEQGYQVRGVVKGKMAIRA--AKSAQPDLILLDIRMPE 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G ++ + + D E + IP+I +SA D+V VK R+G DY+ KP + E+L H
Sbjct: 60 MDGYQVCETLKADPETRDIPIIFISAIDDVLDKVKAFRVGGVDYITKPFQVEEVLARVEH 119
Query: 151 MWRRRRM 157
RR+
Sbjct: 120 QLTIRRL 126
>gi|406877649|gb|EKD26809.1| Sensor protein [uncultured bacterium]
Length = 388
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+ + + L+ ++ + ++ RQ ++ +++E D L+L ++ +P G
Sbjct: 15 KILIVDDKEANLLFIKDLIKSFGFRTVTAKNGRQALEKIDSENPD--LVLLDIMMPEMDG 72
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 141
++LK + + L +PV+++SA D++ + +C++LGA DYLVKP +
Sbjct: 73 FEVLKQLKQKSILYSLPVVVISAIDDMENIAECIKLGATDYLVKPFHS 120
>gi|405982898|ref|ZP_11041209.1| hypothetical protein HMPREF9451_00287 [Slackia piriformis YIT
12062]
gi|404389607|gb|EJZ84683.1| hypothetical protein HMPREF9451_00287 [Slackia piriformis YIT
12062]
Length = 250
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
R+L+ ++D + SD + S L + Y T S + L + GS D++L ++ LP G
Sbjct: 23 RVLVVEDDLSISDVISSALAQDGYVCTCAYSGTEARMILES-GSSFDIVLCDLMLP---G 78
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
L + I R +E +P+++ SA+ E S V LR+GA DY+VKP +ELL + R
Sbjct: 79 LSGEELIARIRERCDVPILVASAKGEASDRVALLRMGADDYVVKPFDLDELLARIEALLR 138
Query: 154 R 154
R
Sbjct: 139 R 139
>gi|127512295|ref|YP_001093492.1| two component, sigma54 specific, Fis family transcriptional
regulator [Shewanella loihica PV-4]
gi|126637590|gb|ABO23233.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Shewanella loihica PV-4]
Length = 447
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
++ +ILL ++D+ +A+ L+ Y+ V S I AL +G + D+++++V +
Sbjct: 2 AEAKILLVEDDAALREALVDTLLLAQYECVDVESAEAAIVAL--KGQEFDMVISDVQMEG 59
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN 146
GL ++ Y+ + ++P+++M+A + V ++LGA DYL KP LLN
Sbjct: 60 IGGLGLVNYLQQHNA--QVPILLMTAFATIDSAVSAIKLGAVDYLAKPFAPEVLLN 113
>gi|21655156|gb|AAL99265.1| CONSTANS-like protein CO5 [Hordeum vulgare subsp. vulgare]
Length = 119
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 440 MCLQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRL 499
+ + P +SA P+ +PS V +K REA L+++R+KRK R F K IRY +RK
Sbjct: 15 VAVVPDALSAGGAPA--PAPSVAVVASKGKEREARLMRYREKRKNRRFQKTIRYASRKAY 72
Query: 500 AERRPRVRGQFVRKV 514
AE RPR++G+F ++
Sbjct: 73 AETRPRIKGRFAKRT 87
>gi|427719530|ref|YP_007067524.1| PAS/PAC sensor hybrid histidine kinase [Calothrix sp. PCC 7507]
gi|427351966|gb|AFY34690.1| PAS/PAC sensor hybrid histidine kinase [Calothrix sp. PCC 7507]
Length = 1934
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILL +N+++ + V LLV Y+V +V + A+ D L+L++V +P G
Sbjct: 629 RILLVENNADMRNYVKQLLVSQQYEVETVTDGVAALAAMRQHRPD--LVLSDVMMPRMDG 686
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++L+ + D + IP+I++SA+ ++ L+ GA DYL+KP ELL
Sbjct: 687 FELLRSLRSDPATREIPMIVLSARAGEESRLEGLQAGADDYLIKPFSARELL 738
>gi|310828045|ref|YP_003960402.1| response regulator receiver:Metal-dependent phosphohydrolase
[Eubacterium limosum KIST612]
gi|308739779|gb|ADO37439.1| response regulator receiver:Metal-dependent phosphohydrolase
[Eubacterium limosum KIST612]
Length = 708
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+I+L +D + A+ + + +Y++ V + R+V+DA+ G I ++L ++ +P G
Sbjct: 6 KIILIADDIELNRAIIAEIFNKNYRIIEVENGRKVLDAIAVHGRAIKMVLLDIIMPEMDG 65
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL-------RTNELLN 146
++L+ + + L++IPVI++++ ++C LG +D + KP R ++
Sbjct: 66 YEVLQAMAGNGWLKQIPVIIITSDSSEKAALRCYNLGVSDMVKKPFNPEIVRRRVENVIE 125
Query: 147 LWTHMWRRRRML 158
L+ H + M+
Sbjct: 126 LYAHKFDLETMI 137
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
++ D+ S V +LL + Y+VT+V S ++ ++ L +E ++ +I+ + +P G
Sbjct: 50 VIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILGSE-PNVSMIITDYWMPEMTGY 108
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
+LK + +L++IPV++MS+++ + + +CL GA D+L+KP+R +++ + T +
Sbjct: 109 DLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDISRITTRI 165
>gi|307152410|ref|YP_003887794.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7822]
gi|306982638|gb|ADN14519.1| multi-sensor signal transduction histidine kinase [Cyanothece sp.
PCC 7822]
Length = 1382
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RI+L D++++ + V LL K YQV +V ++A+ D L+L +V +P G
Sbjct: 630 RIILADDNADMREYVKRLLNKL-YQVEAVGDGMAALEAIRRHPPD--LVLTDVMMPQLNG 686
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
++L+ + + Q +P+I++SA+ +V+ L GA DYLVKP ELL
Sbjct: 687 FELLQQLRSNPLTQELPIILLSARAGEEYLVEALEAGADDYLVKPFSARELL 738
>gi|421482002|ref|ZP_15929584.1| GAF sensor hybrid histidine kinase [Achromobacter piechaudii HLE]
gi|400199337|gb|EJO32291.1| GAF sensor hybrid histidine kinase [Achromobacter piechaudii HLE]
Length = 1138
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSD----IDLILAEVDLPM 90
+L+ ++D + A+ S+L +V R+ R+ +D L SD IDL+L ++ +P
Sbjct: 1015 VLVVEDDVRNVFALSSILEPTGVRVEIARNGREALDVLGRARSDGQPVIDLVLMDIMMPE 1074
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 150
G ++ I + E +R+P+I ++A+ KCL GA DY+ KPL LL+L
Sbjct: 1075 MDGYTAMREIRKRPEWRRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVERLLSL-VR 1133
Query: 151 MWRR 154
+W R
Sbjct: 1134 VWMR 1137
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 36 LLCDNDSNSSDAVFSLLVKCS-YQVTSVRSP-RQVIDALNAEGSDIDLILAEVDLPMTKG 93
+L +DS+ AV + +++ S Y+VT+V S R + D+++I+ + +P G
Sbjct: 52 VLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLALGLLPDVNMIITDYWMPGMTG 111
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHM 151
++LK++ EL+ IPV++MS+++ + + +CL GA D+L+KP+R +++ L + +
Sbjct: 112 YELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDFLLKPVRPSDVSRLCSRI 169
>gi|116623388|ref|YP_825544.1| response regulator receiver sensor signal transduction histidine
kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116226550|gb|ABJ85259.1| response regulator receiver sensor signal transduction histidine
kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 566
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RIL+ +++ + D + L K + VT + R+ ++ L E D DL+L ++ +P G
Sbjct: 161 RILIAEDNPANRDILRRRLEKDGHVVTETQDGREALEQL--ERGDFDLLLLDILMPRLDG 218
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
+ L YI R++ +PVIM+SA DE+ VV+C+ +GA DYL KP+
Sbjct: 219 FETLAYIRRNERFHDLPVIMISALDEIQSVVRCIEMGAEDYLPKPI 264
>gi|381205808|ref|ZP_09912879.1| two-component hybrid sensor and regulator [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 349
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 35 ILLCDNDSNSSDAVFSL---LVKCSY-QVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
ILL D+ D +++L L K Y Q+TS + + +N+ + DLIL ++ +P
Sbjct: 8 ILLVDD---QEDNIYTLERRLKKDGYTQLTSATNGTDALQLINS--NSYDLILLDLMMPD 62
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
GL++L+ I D L+ IPVIM++A DE + KC++ GA D+++KP + L
Sbjct: 63 ISGLEVLEEIKSDPNLRHIPVIMITASDEREIAAKCIKSGADDFIIKPFNSTIL 116
>gi|90579344|ref|ZP_01235154.1| phosphoglycerate transport system transcription regulator
[Photobacterium angustum S14]
gi|90440177|gb|EAS65358.1| phosphoglycerate transport system transcription regulator
[Photobacterium angustum S14]
Length = 424
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
++ +L+ D+D + DA LL Y V +V+ +VI+ LN S + I+ ++ +P
Sbjct: 5 EINVLIVDDDQDVLDAYQELLELSGYNVATVQDSTKVINMLNHNWSGV--IVTDMYMPGL 62
Query: 92 KGLKMLKYIT-RDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLW-T 149
G+++L+ I D E IPVI+++ ++ + V L+ GA D+L KPL+ EL+ L
Sbjct: 63 DGMELLEKIQDFDNE---IPVIIVTGHGDIPMAVDALKKGAIDFLQKPLQPKELIKLLEK 119
Query: 150 HMWRRRRML 158
H+ +R++++
Sbjct: 120 HLPQRKKII 128
>gi|384045722|ref|YP_005493739.1| transcriptional regulatory protein ycbL [Bacillus megaterium
WSH-002]
gi|345443413|gb|AEN88430.1| Uncharacterized transcriptional regulatory protein ycbL [Bacillus
megaterium WSH-002]
Length = 138
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ ++D S+ V LVK Y+VT+V + ++ LN + D+ IL ++ LP G
Sbjct: 5 KILIVEDDPFISEMVKEGLVKEGYEVTAVFDGEEALEILNVQTYDV--ILLDLMLPKVDG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
++ LK I R K + +PV++MSA+DE L GA DY+ KP ELL + R
Sbjct: 63 MECLK-IIRSKSM--VPVLIMSAKDEDVDKALGLGFGADDYIAKPFSMIELLARIKAIIR 119
Query: 154 R 154
R
Sbjct: 120 R 120
>gi|376003885|ref|ZP_09781685.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
gi|375327705|emb|CCE17438.1| putative bifunctional two-component response regulator,
CheY-like/Guanylate cyclase [Arthrospira sp. PCC 8005]
Length = 352
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
+L+ D++ + D + L + Y V + + + + + + +DL+L ++ +P G
Sbjct: 8 VLIVDDNEINRDLLARRLQRQGYDVLVASNGFEALKIMRS--TALDLVLLDIMMPQMNGY 65
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
++L+ + D +L+ IPVIM+SA +++ +V+C+ LGA DYL KP + H+ R
Sbjct: 66 QVLESLKADLQLRHIPVIMISAVNDIDSIVRCIELGAEDYLSKP---------FNHVLLR 116
Query: 155 RRMLGLAEK 163
R+ EK
Sbjct: 117 ARINACLEK 125
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNA--EGS----------- 77
S+ +L D+ + LL SYQVT+V S + ++ L EG
Sbjct: 8 SRFHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSP 67
Query: 78 -----DIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
D++LI+ + +P G +LK + L+ IPV++MS+++ + + +CL GA
Sbjct: 68 DHQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAE 127
Query: 133 DYLVKPLRTNELLNLWTHMWRRRRMLGLA 161
++ +KP++ ++ L +H+ +R++ L +A
Sbjct: 128 EFFLKPVKLADMKKLKSHLLKRKQQLPMA 156
>gi|413965408|ref|ZP_11404634.1| multi-sensor hybrid histidine kinase [Burkholderia sp. SJ98]
gi|413928082|gb|EKS67371.1| multi-sensor hybrid histidine kinase [Burkholderia sp. SJ98]
Length = 1027
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL ++D + A+ ++ + R+ R+ ++AL A SDIDL+L ++ +P GL
Sbjct: 908 ILLAEDDVRNIFALSRVIEPLGATLEIARNGREALEAL-ARRSDIDLVLMDIMMPEMDGL 966
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ I + E R+P+I ++A+ S KCL GA DY+ KP+ ++L++L +W R
Sbjct: 967 TAMTEIRKRTEHARLPIIALTAKAMPSDREKCLEAGADDYISKPIDVDKLVSL-CRVWLR 1025
Query: 155 RR 156
+R
Sbjct: 1026 QR 1027
>gi|356519473|ref|XP_003528397.1| PREDICTED: dynamin-related protein 3A-like [Glycine max]
Length = 1174
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Query: 457 NSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 510
N PS + +K+ RR A+L++FR+KRKERCF+KKIRY RK +A+R R GQF
Sbjct: 113 NDPS---RSSKLSRRFASLVRFREKRKERCFEKKIRYSCRKEVAQRMHRKNGQF 163
>gi|354584521|ref|ZP_09003415.1| multi-sensor hybrid histidine kinase [Paenibacillus lactis 154]
gi|353194042|gb|EHB59545.1| multi-sensor hybrid histidine kinase [Paenibacillus lactis 154]
Length = 1219
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+ILL D+D + A+ S+L + VT + R+ I+ L E D DL+L ++ +P G
Sbjct: 1100 KILLVDDDIRNVFALSSVLEGYNMDVTFAENGREAIELLQ-ENPDYDLVLMDMMMPEMDG 1158
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL---WTH 150
+ ++ + E +++P+I ++A+ KC+ GA+DY+ KP++T +LL+L W +
Sbjct: 1159 YEAMRRLREMPEFEKLPIIALTAKAMKEDRAKCIEAGASDYMKKPIQTEQLLSLMRVWLY 1218
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 80 DLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPL 139
D I+ ++ LP+ G +L + E + IPV ++S DEV + L +GA YL KP
Sbjct: 876 DAIILDIQLPVIDGWSVLGELKSSAETRHIPVHVISVVDEVK---QGLMMGAIAYLKKPS 932
Query: 140 RTNELLNLWTHM 151
L N +TH+
Sbjct: 933 SREALENAFTHI 944
>gi|67923372|ref|ZP_00516853.1| Response regulator receiver [Crocosphaera watsonii WH 8501]
gi|67854797|gb|EAM50075.1| Response regulator receiver [Crocosphaera watsonii WH 8501]
Length = 176
Score = 62.8 bits (151), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
K IL+ D+ + + +L Y T S +Q ++ + ++IDLIL ++ +P
Sbjct: 19 KFLILVVDDMRINRQLLIEILDTAGYGTTFAISGKQALERVKV--TEIDLILLDLMMPEI 76
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G+++ K + D+ IPVI ++A E + V+ GA DY+ KP RT ELL
Sbjct: 77 NGIEVYKLLKEDENTAHIPVIFLTAVTETNNVLNAFEAGAVDYVTKPFRTPELL 130
>gi|394990198|ref|ZP_10383030.1| pilus protein [Sulfuricella denitrificans skB26]
gi|393790463|dbj|GAB72669.1| pilus protein [Sulfuricella denitrificans skB26]
Length = 121
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+I++ D+ + LL K YQV + S + I E D LI+ +V +P G
Sbjct: 5 KIMVVDDSPTERFFLGGLLTKQGYQVITAESGEEAITKAKLEKPD--LIIMDVVMPGLNG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ + I++D+E + IPVIM + + + + V +R GA DY+VKP+ +ELL
Sbjct: 63 FQATRAISKDEETKDIPVIMCTTKGQETDKVWGMRQGAKDYIVKPVNQDELL 114
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
D S+++IL+ D+ + V ++L + Y + S S R+ ++ + + +LIL +V +
Sbjct: 3 DNSQIKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMV--KNIRFNLILLDVMM 60
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN-L 147
P G ++++ + D++ + IP+I ++A+ + VV+ GA DYL+KP ELL+ +
Sbjct: 61 PEMDGYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIKPFNPKELLSRV 120
Query: 148 WTHMWRRRRMLGLAEKN 164
TH+ + L E N
Sbjct: 121 KTHIELKFARENLEEAN 137
>gi|406899105|gb|EKD42470.1| hypothetical protein ACD_73C00142G0003 [uncultured bacterium]
Length = 128
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+I++ D+D + ++LV ++++ SV P Q + L+ E D+ ++ ++ +P G
Sbjct: 7 KIVIIDDDPAVHKMLATVLVHRNFKIISVIDPGQAWETLSHEKPDLAIL--DIMMPGMSG 64
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ + + I D L+ I ++M+SA+D + + L+ GA DY+ KP L+N HM +
Sbjct: 65 VDLCRKIREDNNLKDILIVMLSAKDSQNDRLMGLQYGADDYVTKPFHITTLVNKLEHMIK 124
Query: 154 RRR 156
+++
Sbjct: 125 KKK 127
>gi|17228616|ref|NP_485164.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
gi|17130467|dbj|BAB73078.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
Length = 1932
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+D + A+ S+L + QV + R+ I L SDID++L +V +P G
Sbjct: 1813 KVLIVDDDVRNIFALTSMLERYQMQVIYAENGREGISLLE-NTSDIDVVLMDVMMPEMDG 1871
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ ++ I + ++ + +P+I ++A+ +C+ GA+DY+ KP+ T +LL+L +W
Sbjct: 1872 YETMQLIRKKEQFKALPIIALTAKAMQGDRDQCIAAGASDYIAKPVDTEQLLSL-LRVWL 1930
Query: 154 RR 155
R
Sbjct: 1931 YR 1932
>gi|238024581|ref|YP_002908813.1| multi-sensor Hybrid histidine Kinase [Burkholderia glumae BGR1]
gi|237879246|gb|ACR31578.1| Multi-sensor Hybrid Histidine Kinase [Burkholderia glumae BGR1]
Length = 1416
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 30 RSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLP 89
R RIL+ D++++ V LL + Y+V+ + A A+ S DLIL+++ +P
Sbjct: 622 RESTRILVADDNADMRAYVQRLLGE-QYEVSCAVDGYDALRA--AKRSRPDLILSDIMMP 678
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G+ +L+ + D+EL+ +PVI++SA+ V LR GA DYLVKP EL+
Sbjct: 679 GLDGIGLLQTVRGDEELRDVPVILLSARAGEEARVHGLRAGADDYLVKPFSARELV 734
>gi|334339398|ref|YP_004544378.1| sigma-54 factor interaction domain-containing protein
[Desulfotomaculum ruminis DSM 2154]
gi|334090752|gb|AEG59092.1| sigma-54 factor interaction domain-containing protein
[Desulfotomaculum ruminis DSM 2154]
Length = 494
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL D+D +S V + L + ++V S R ++ + + D ++L+++ +P G+
Sbjct: 3 ILLVDDDQDSRACVGNFLREMGHRVMECDSGRSALNLIAS--GDFSMVLSDIKMPGMSGI 60
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
++LK I+ E +++ V++ + ++ ++ LR GA DYL+KP+ EL
Sbjct: 61 ELLKNISFLPEGKKVDVVLFTGHGDMETAIEALRAGAYDYLLKPINVEEL 110
>gi|16329397|ref|NP_440125.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|383321138|ref|YP_005381991.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324308|ref|YP_005385161.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490192|ref|YP_005407868.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435458|ref|YP_005650182.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803]
gi|451813556|ref|YP_007450008.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|1651878|dbj|BAA16805.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
gi|339272490|dbj|BAK48977.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803]
gi|359270457|dbj|BAL27976.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273628|dbj|BAL31146.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276798|dbj|BAL34315.1| regulatory component of sensory transduction system Rre2
[Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957272|dbj|BAM50512.1| regulatory components of sensory transductionsystem [Bacillus
subtilis BEST7613]
gi|451779525|gb|AGF50494.1| regulatory components of sensory transduction system [Synechocystis
sp. PCC 6803]
Length = 452
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 29 DRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDL 88
D K ILL D+ N+ + LL+ Y V SV S + + L + D LIL ++ +
Sbjct: 5 DEKKGNILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPD--LILLDIKM 62
Query: 89 PMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
P G ++ + I +++ELQ IP+I +SA + VK G DY+ KP + E++
Sbjct: 63 PDMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVV 119
>gi|398802735|ref|ZP_10561938.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Polaromonas sp. CF318]
gi|398098973|gb|EJL89246.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Polaromonas sp. CF318]
Length = 246
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D+D + + S L K +VT S R + AL E + +DLI+ ++ LP GL
Sbjct: 7 ILIVDDDREIRELLGSYLEKNGLRVTKAESGRHMRAAL--ESAAVDLIVLDLMLPGEDGL 64
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ + + K + +P++M++A++E + + L +GA DYL KP ELL + RR
Sbjct: 65 TLCRDLRAGKH-KALPILMLTARNEEADRILGLEMGADDYLAKPFAARELLARIRSVLRR 123
Query: 155 RRML 158
RML
Sbjct: 124 TRML 127
>gi|283768598|ref|ZP_06341510.1| putative regulatory protein VanR [Bulleidia extructa W1219]
gi|283104990|gb|EFC06362.1| putative regulatory protein VanR [Bulleidia extructa W1219]
Length = 232
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
RILL D++ + +A+ L K +++ + + ++ ++ + E +DL+L ++ +P+ G
Sbjct: 3 RILLVDDEKDIVEALKIFLSKEDFELLTATNGKEALEIVQKE--KVDLVLMDIMMPIMDG 60
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+K K I ++ Q IP+I +SA+ E ++ L +GA DY+ KP E++ R
Sbjct: 61 VKATKEIRKN---QNIPIIFLSAKGEREDKIEGLTIGADDYITKPFHPEEVIARIKAQLR 117
Query: 154 RRRMLGLAEKN 164
R + LG +K+
Sbjct: 118 RFKELGSQQKD 128
>gi|326796472|ref|YP_004314292.1| Fis family transcriptional regulator [Marinomonas mediterranea
MMB-1]
gi|326547236|gb|ADZ92456.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas mediterranea MMB-1]
Length = 450
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 32 KVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMT 91
KV++L+ ++D ++A+ L+ Y + V S + I +L + D+++++++LP
Sbjct: 3 KVKLLVVEDDRGLAEALEDTLLLAGYDCSMVGSSEEAILSLKKQ--SYDMVVSDINLPGM 60
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNL 147
G +LK++T +P+++M+A +++ V+ +R GA DYL+KP ELL +
Sbjct: 61 DGYGLLKHVT--DHYPELPIMLMTAYGDIAHAVEAMREGAVDYLLKPFEEAELLEV 114
>gi|406967146|gb|EKD92312.1| hypothetical protein ACD_29C00070G0002 [uncultured bacterium]
Length = 226
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+RILL ++D D ++S L + V V+ + DAL + DL++ ++ LP
Sbjct: 1 MRILLVEDDELLGDGIYSGLKHYGHTVDWVKDGKTAFDALTRKQETFDLVVLDLGLPKMP 60
Query: 93 GLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNEL 144
GL +L+ I R+K + +PV++++A+D + V+ L GA DY+ KP +EL
Sbjct: 61 GLDVLRKI-REKGIV-VPVLILTAKDAIEDRVQGLDAGADDYIAKPFDLDEL 110
>gi|383790324|ref|YP_005474898.1| diguanylate cyclase [Spirochaeta africana DSM 8902]
gi|383106858|gb|AFG37191.1| diguanylate cyclase (GGDEF) domain-containing protein [Spirochaeta
africana DSM 8902]
Length = 621
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
ILL D+ ++ A+ LL + Y V +S R +D +A DLI+ +VD+P G
Sbjct: 20 ILLIDDSHSTIRALRDLLEQHGYLVRHAQSGRSGLD--SAITHHPDLIVLDVDMPDMDGF 77
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ + +D++ IPV+ +S ++V+ V+ RLG DY+ KP E+L
Sbjct: 78 AVCSSLKQDEQTADIPVVFISGLNDVTTKVQAFRLGGVDYITKPFHAEEVL 128
>gi|163815559|ref|ZP_02206932.1| hypothetical protein COPEUT_01726 [Coprococcus eutactus ATCC 27759]
gi|158449196|gb|EDP26191.1| response regulator receiver domain protein [Coprococcus eutactus
ATCC 27759]
Length = 229
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+CD++ + A+ L Y V + ++ +D +NA+ DI L+L +V +P G+
Sbjct: 4 ILICDDEKDIVSAIEIYLKTAGYSVYKAYNGKEAVDMVNAK--DIQLVLMDVMMPQMDGI 61
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 154
+ I +E +PVIM++A+ E + V L +GA DY+ KP ELL RR
Sbjct: 62 TAMAKI---RENSNVPVIMLTAKSEDTDKVLGLEVGADDYVTKPFNPVELLARVKSQLRR 118
Query: 155 RRMLGLAE 162
LG E
Sbjct: 119 YMQLGGGE 126
>gi|415952681|ref|ZP_11557210.1| Sensor protein, partial [Herbaspirillum frisingense GSF30]
gi|407757347|gb|EKF67345.1| Sensor protein, partial [Herbaspirillum frisingense GSF30]
Length = 408
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL----NAEGSDIDLILAEVDLP 89
RIL+ ++D + A+ S+L +V R+ R+ +DAL + G+ IDL+L ++ +P
Sbjct: 284 RILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALDALQRSQDKPGAVIDLVLMDIMMP 343
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
GL ++ I + +R+P+I ++A+ KCL GA DY+ KPL +LL+L
Sbjct: 344 EMDGLTAMREIRKQAIWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSL-V 402
Query: 150 HMW 152
+W
Sbjct: 403 RVW 405
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 18/141 (12%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDAL------------------ 72
S+ +L D+ + LL SYQVT+V S + ++ L
Sbjct: 8 SQYHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPNTPSISPN 67
Query: 73 NAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAA 132
N + +++L++ + +P G +LK I L+ IPV++MS+++ S + +CL GA
Sbjct: 68 NHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAE 127
Query: 133 DYLVKPLRTNELLNLWTHMWR 153
++ +KP+R ++L+ L +H+ +
Sbjct: 128 EFFLKPVRQSDLVRLKSHIKK 148
>gi|357164488|ref|XP_003580070.1| PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Brachypodium
distachyon]
Length = 341
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 6/66 (9%)
Query: 471 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPSSVDY 530
REA L+++R+KRK R F+K IRY +RK AE RPRV+G+F ++ NG +++
Sbjct: 243 REARLMRYREKRKSRRFEKTIRYASRKAYAETRPRVKGRFAKRTG------NGGAAALGE 296
Query: 531 DEDEDE 536
+EDE E
Sbjct: 297 EEDEHE 302
>gi|297601646|ref|NP_001051183.2| Os03g0734900 [Oryza sativa Japonica Group]
gi|222625745|gb|EEE59877.1| hypothetical protein OsJ_12477 [Oryza sativa Japonica Group]
gi|255674875|dbj|BAF13097.2| Os03g0734900 [Oryza sativa Japonica Group]
Length = 271
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 442 LQPGQVSANSWPSYGNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAE 501
+ PG VS + P+ + ST V RR A+L++FR+KRKERCFDKKIRY RK +A+
Sbjct: 71 MPPGLVSM-AVPTTFDEKSTTV----AARRVASLMRFREKRKERCFDKKIRYSVRKEVAQ 125
Query: 502 RRPRVRGQFVRKVNGVNVDLNGQPSSVDYDEDEDEEEE 539
+ R +GQF + + + + P + ++D E
Sbjct: 126 KMKRRKGQFAGRADFGDGSCSSAPCGSTANGEDDHIRE 163
>gi|118351766|ref|XP_001009158.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila]
gi|89290925|gb|EAR88913.1| Response regulator receiver domain containing protein [Tetrahymena
thermophila SB210]
Length = 135
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTK 92
+ +L ++D+ AV +L C+YQVT+V + R D L + ID++L ++ +P
Sbjct: 3 IHVLFAEDDNFQRLAVTHILQLCNYQVTAVENGRIARDILLKQDQKIDIVLLDIRMPEMD 62
Query: 93 GLKMLKYITRDKE-LQRIPVIMMSAQD-EVSVVVKCLRLGAADYLVKPLR 140
L++L ++ E LQ+IPV+++S D E+ L GA D+++KP++
Sbjct: 63 ALELLSFMQEHSENLQKIPVVIISLNDLEIQTF---LERGAKDFIIKPMK 109
>gi|224067116|ref|XP_002302363.1| predicted protein [Populus trichocarpa]
gi|222844089|gb|EEE81636.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 4/56 (7%)
Query: 456 GNSPSTEVKMNKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFV 511
G++P K + + RR A+L++FR+KRKERCFDKKIRY RK +A+R R GQF
Sbjct: 48 GDTP----KRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFA 99
>gi|291454552|ref|ZP_06593942.1| two-component system response regulator [Streptomyces albus J1074]
gi|359148547|ref|ZP_09181688.1| winged helix family two component transcriptional regulator
[Streptomyces sp. S4]
gi|421738371|ref|ZP_16176731.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Streptomyces sp. SM8]
gi|291357501|gb|EFE84403.1| two-component system response regulator [Streptomyces albus J1074]
gi|406693212|gb|EKC96873.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Streptomyces sp. SM8]
Length = 232
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 33 VRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALN-AEGSDIDLILAEVDLPMT 91
+R+LL ++D++ + A+ ++L + +QVT RS + + AL A G ++L ++ LP
Sbjct: 1 MRLLLVEDDNHVAGALSAILSRHGFQVTHARSGEEALKALLPAGGPPFGVVLLDLGLPDQ 60
Query: 92 KGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++ I + +PVIM++A+ +V + L LGA DY+VKP T ELL
Sbjct: 61 DGYEVCGKI---RARTSVPVIMVTARADVRSRIHGLNLGADDYVVKPYDTGELL 111
>gi|187927709|ref|YP_001898196.1| response regulator receiver protein [Ralstonia pickettii 12J]
gi|241662178|ref|YP_002980538.1| response regulator receiver protein [Ralstonia pickettii 12D]
gi|309780773|ref|ZP_07675514.1| type IV pili response regulator PilH [Ralstonia sp. 5_7_47FAA]
gi|404394321|ref|ZP_10986125.1| hypothetical protein HMPREF0989_03407 [Ralstonia sp. 5_2_56FAA]
gi|187724599|gb|ACD25764.1| response regulator receiver protein [Ralstonia pickettii 12J]
gi|240864205|gb|ACS61866.1| response regulator receiver protein [Ralstonia pickettii 12D]
gi|308920455|gb|EFP66111.1| type IV pili response regulator PilH [Ralstonia sp. 5_7_47FAA]
gi|348613529|gb|EGY63114.1| hypothetical protein HMPREF0989_03407 [Ralstonia sp. 5_2_56FAA]
Length = 122
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
++L+ D+ + + +L K ++VT Q + L AE DLIL +V +P G
Sbjct: 5 KVLVVDDSPTEALHLSEILGKNGFKVTVAADSEQAMTKLEAE--TFDLILMDVVMPGQNG 62
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
+ + I +D+ Q IPVIM + + + V +R GA+DY+VKP++ ELL
Sbjct: 63 YQATRAIKKDERFQGIPVIMCTTKGLETDRVWGMRQGASDYIVKPVKAEELL 114
>gi|157962198|ref|YP_001502232.1| response regulator receiver protein [Shewanella pealeana ATCC
700345]
gi|157847198|gb|ABV87697.1| response regulator receiver protein [Shewanella pealeana ATCC
700345]
Length = 120
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 31 SKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPM 90
+K +IL+ D+D S + S+L YQVT+V S VID N + ++ I ++ +P
Sbjct: 2 NKAKILVVDDDPICSSLLLSVLGD-DYQVTTVNSGADVIDIANIQRPNV--IFLDIMMPG 58
Query: 91 TKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL 145
G ++LK + +D + ++PVI++SA E S LRLGA YL KP+ E+
Sbjct: 59 KNGYQVLKDLKQDPQTSKLPVIIVSALAEESDESLGLRLGADGYLAKPISPKEVF 113
>gi|302398793|gb|ADL36691.1| GATA domain class transcription factor [Malus x domestica]
Length = 294
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 453 PSYGNSPSTEVKMNKVD------RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRV 506
PS G P + MN + +R A+L +FR+KRKERCFDKKIRY RK +A R R
Sbjct: 108 PSMGPVPLNQQGMNDLPAKPTQPQRAASLSRFREKRKERCFDKKIRYTVRKEVALRMQRK 167
Query: 507 RGQFVRKVNGVNVDLNGQPSSVDYDEDEDE 536
+GQF + +G P+S +DE
Sbjct: 168 KGQFTSSKASSD---DGGPASSTQGSGQDE 194
>gi|409407191|ref|ZP_11255642.1| two component hybrid sensor histidine kinase/response regulator
protein [Herbaspirillum sp. GW103]
gi|386432942|gb|EIJ45768.1| two component hybrid sensor histidine kinase/response regulator
protein [Herbaspirillum sp. GW103]
Length = 1175
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAE----GSDIDLILAEVDLP 89
RIL+ ++D + A+ S+L +V R+ R+ ++AL G+ IDL+L ++ +P
Sbjct: 1051 RILVVEDDVRNIFALSSVLEPKGMKVDIARNGREALEALQRSQEQPGAPIDLVLMDIMMP 1110
Query: 90 MTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWT 149
GL ++ I + +R+P+I ++A+ KCL GA DY+ KPL +LL+L
Sbjct: 1111 EMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKLLSL-V 1169
Query: 150 HMW 152
+W
Sbjct: 1170 RVW 1172
>gi|119483445|ref|ZP_01618859.1| adenylate cyclase [Lyngbya sp. PCC 8106]
gi|119458212|gb|EAW39334.1| adenylate cyclase [Lyngbya sp. PCC 8106]
Length = 1361
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 28 IDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVD 87
++ ++ +IL+ D+D + + + L +Y VT S + ++ L A G DLIL +V
Sbjct: 885 LNHNQFKILIVDDDPINLQVLVNYLCLQNYAVTQASSGIEAMEILEA-GYIPDLILLDVM 943
Query: 88 LPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELL-N 146
+P G ++ + I ++P++M++A+++VS +V L +GA DYL KPL +ELL
Sbjct: 944 MPRMTGYEVTRRIRETWPPHQLPIMMLTAKNQVSDLVAGLEVGANDYLSKPLNKDELLAR 1003
Query: 147 LWTHM 151
+ TH+
Sbjct: 1004 IKTHI 1008
>gi|75910975|ref|YP_325271.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC 29413]
gi|75704700|gb|ABA24376.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC 29413]
Length = 1195
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 34 RILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKG 93
+IL+ D+D + A+ SLL QV + R I+ L A SDI+ +L +V +P G
Sbjct: 1076 KILIIDDDLRNIFAITSLLESYQMQVLFAENGRDGIELLQA-NSDINAVLMDVMMPEMDG 1134
Query: 94 LKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWR 153
+ + I + K+ + +P+I ++A+ KC+ GA+DY+ KP+ T +LL+L +W
Sbjct: 1135 YETTRSIRQQKQFRTLPIIALTAKAMPGDREKCIEAGASDYITKPVDTEQLLSLL-RVWL 1193
Query: 154 RR 155
R
Sbjct: 1194 YR 1195
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 8 LNKECSGAGIGNSKSSGDGFIDRSKVRILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQ 67
L K S + ++ + FIDR R+L+ ++D + ++ L+ Q +V +
Sbjct: 904 LQKPVSPEILNHTLTEIKSFIDRKVKRLLVIEDDPVQAQSIIELIGNGDVQSMAVNTGAA 963
Query: 68 VIDALNAEGSDIDLILAEVDLPMTKGLKMLKYITRDKELQRIPVIMMSAQDEVSVVVKCL 127
++ L ++ D I+ ++ LP GL++L+ I ++ L ++P+I+ + ++ L
Sbjct: 964 ALEILRSQ--HFDCIVLDLGLPDMSGLELLEQIKQEPNLVKLPIIVYTGKEISRQEETQL 1021
Query: 128 RLGAADYLVKPLRTNELLNLWTHMWRRR 155
R A ++K +R+ E L T ++ R
Sbjct: 1022 RRLAESIIIKNVRSPERLLDETSLFLHR 1049
>gi|428319303|ref|YP_007117185.1| response regulator receiver sensor signal transduction histidine
kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242983|gb|AFZ08769.1| response regulator receiver sensor signal transduction histidine
kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 401
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 35 ILLCDNDSNSSDAVFSLLVKCSYQVTSVRSPRQVIDALNAEGSDIDLILAEVDLPMTKGL 94
IL+ D++ + D +F LL ++V I+ ++ D LIL ++ +P G
Sbjct: 11 ILIVDDNQTNLDVLFELLRNYGFKVLVALDGESAIEQIDYIHPD--LILLDIMMPGIDGF 68
Query: 95 KMLKYITRDKELQRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLN-LWTHMWR 153
+ + + D Q IP+I MSA + VK + GA DY+ KP + E+L+ + TH+
Sbjct: 69 ETCRRLKADPSTQDIPIIFMSALSDTPDKVKGFQTGAVDYITKPFQHEEVLSRIQTHLTI 128
Query: 154 RRRMLGLAEKNI 165
R L EKN+
Sbjct: 129 RSLQKKLEEKNL 140
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,639,388,283
Number of Sequences: 23463169
Number of extensions: 361284045
Number of successful extensions: 1266974
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20948
Number of HSP's successfully gapped in prelim test: 49670
Number of HSP's that attempted gapping in prelim test: 1226336
Number of HSP's gapped (non-prelim): 75663
length of query: 554
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 406
effective length of database: 8,886,646,355
effective search space: 3607978420130
effective search space used: 3607978420130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)