Query 008779
Match_columns 554
No_of_seqs 326 out of 2383
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 11:31:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008779.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008779hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 6.8E-93 2.3E-97 768.0 50.9 499 40-547 3-516 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3.7E-89 1.3E-93 737.2 49.3 486 43-545 1-495 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1.6E-82 5.6E-87 691.1 46.2 489 39-546 6-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 2.9E-77 1E-81 643.3 42.6 456 43-544 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 9.7E-74 3.3E-78 618.5 42.3 451 58-543 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 3.3E-69 1.1E-73 587.4 43.1 454 45-543 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 2.5E-68 8.5E-73 580.7 47.5 461 41-544 18-520 (521)
8 1zr6_A Glucooligosaccharide ox 100.0 1.7E-68 5.7E-73 580.1 43.0 463 40-550 5-484 (503)
9 2y3s_A TAML; oxidoreductase; H 100.0 1.3E-67 4.4E-72 575.3 44.6 450 60-544 34-528 (530)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 9.4E-65 3.2E-69 545.9 38.6 434 59-543 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 4.6E-40 1.6E-44 359.9 33.8 217 40-273 30-257 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 1.1E-33 3.8E-38 308.0 35.3 196 82-282 53-259 (524)
13 4bby_A Alkyldihydroxyacetoneph 100.0 2.7E-33 9.2E-38 312.8 23.6 201 83-284 198-407 (658)
14 4feh_A Oxidoreductase DPRE1; a 100.0 4E-31 1.4E-35 284.2 38.5 178 82-265 35-218 (481)
15 2vfr_A Xylitol oxidase, aldito 100.0 1.3E-30 4.6E-35 277.2 34.1 175 82-267 12-189 (422)
16 3pm9_A Putative oxidoreductase 100.0 5.3E-32 1.8E-36 290.9 22.7 204 82-287 43-253 (476)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 3.4E-31 1.1E-35 290.9 21.3 197 87-286 134-339 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 1.5E-29 5E-34 276.0 23.6 199 87-289 53-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 1.8E-29 6E-34 276.9 18.8 198 60-268 10-228 (561)
20 3js8_A Cholesterol oxidase; ch 100.0 6.1E-29 2.1E-33 267.4 18.8 179 82-265 21-221 (540)
21 1e8g_A Vanillyl-alcohol oxidas 100.0 8.2E-28 2.8E-32 264.0 25.2 201 87-289 67-300 (560)
22 1f0x_A DLDH, D-lactate dehydro 100.0 3E-28 1E-32 265.8 16.3 195 87-286 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 4.7E-25 1.6E-29 224.5 13.8 164 87-263 51-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.9 2.4E-24 8.4E-29 220.6 13.0 160 87-261 45-209 (326)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 3.1E-24 1.1E-28 220.7 12.8 166 86-263 26-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 8.4E-23 2.9E-27 209.5 16.3 165 87-263 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 5E-22 1.7E-26 196.8 8.5 152 89-262 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 6.6E-19 2.3E-23 169.6 12.6 116 148-271 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.3 1.3E-06 4.5E-11 87.3 8.7 156 90-262 4-178 (287)
30 1n62_C Carbon monoxide dehydro 97.8 4.5E-05 1.5E-09 76.2 7.9 155 90-261 4-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.5 0.00011 3.8E-09 78.0 6.2 152 93-260 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 96.7 0.0018 6.3E-08 64.4 6.5 153 90-260 4-175 (288)
33 3nvz_B Xanthine dehydrogenase/ 96.7 0.0028 9.4E-08 63.6 7.4 157 90-260 9-190 (305)
34 3hrd_C Nicotinate dehydrogenas 93.3 0.086 2.9E-06 52.4 5.5 75 91-170 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.0 0.28 9.5E-06 49.3 4.1 76 90-171 5-84 (324)
36 1wvf_A 4-cresol dehydrogenase 87.3 0.5 1.7E-05 50.7 5.1 36 510-545 481-517 (520)
37 3unc_A Xanthine dehydrogenase/ 75.4 2.1 7.1E-05 51.1 4.8 78 90-173 232-313 (1332)
38 4bby_A Alkyldihydroxyacetoneph 74.1 5 0.00017 44.2 7.2 29 509-537 625-654 (658)
39 3pm9_A Putative oxidoreductase 54.3 24 0.00081 37.1 7.4 29 509-537 443-472 (476)
40 1e8g_A Vanillyl-alcohol oxidas 53.1 14 0.00049 39.7 5.6 33 517-549 523-555 (560)
41 1f0x_A DLDH, D-lactate dehydro 52.2 7.3 0.00025 42.1 3.0 32 516-548 536-568 (571)
42 2i0k_A Oxidoreductase; MIX alp 42.1 10 0.00036 40.8 2.3 22 517-538 533-554 (561)
43 2uuu_A Alkyldihydroxyacetoneph 39.2 39 0.0013 36.5 6.3 22 517-538 560-581 (584)
44 3zyv_A AOH1; oxidoreductase, m 37.3 27 0.00093 41.7 5.0 78 93-174 242-321 (1335)
45 1xty_A PTH, peptidyl-tRNA hydr 36.4 34 0.0012 28.6 4.1 42 82-125 48-90 (120)
46 3js8_A Cholesterol oxidase; ch 32.5 16 0.00055 39.0 1.8 23 516-538 511-533 (540)
47 1rzw_A Protein AF2095(GR4); be 31.2 56 0.0019 27.5 4.6 42 82-125 42-84 (123)
48 1wn2_A Peptidyl-tRNA hydrolase 30.8 83 0.0028 26.3 5.7 42 82-125 49-91 (121)
49 2zv3_A PTH, peptidyl-tRNA hydr 30.1 82 0.0028 26.0 5.5 41 82-124 43-84 (115)
50 1rlk_A Hypothetical protein TA 29.2 85 0.0029 26.0 5.4 42 82-125 45-87 (117)
51 3fbi_A Mediator of RNA polymer 28.9 30 0.001 27.1 2.3 17 513-529 22-39 (84)
52 1q7s_A BIT1, protein CGI-147; 26.1 69 0.0024 26.6 4.3 41 82-124 45-86 (117)
53 2g2c_A Putative molybdenum cof 24.9 1.2E+02 0.0041 26.5 6.0 42 92-133 47-88 (167)
54 3p04_A Uncharacterized BCR; SE 23.2 66 0.0022 25.3 3.4 34 92-147 7-40 (87)
55 1mkz_A Molybdenum cofactor bio 21.7 1.5E+02 0.0052 26.0 6.0 41 92-132 46-87 (172)
56 3rfq_A Pterin-4-alpha-carbinol 21.0 1.6E+02 0.0055 26.4 6.1 41 92-132 67-107 (185)
57 1uuy_A CNX1, molybdopterin bio 20.4 1.7E+02 0.0059 25.5 6.1 41 92-132 48-89 (167)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=6.8e-93 Score=767.96 Aligned_cols=499 Identities=55% Similarity=0.999 Sum_probs=439.8
Q ss_pred ChhhHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEE
Q 008779 40 DENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRV 119 (554)
Q Consensus 40 ~~~~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v 119 (554)
+.++|++||+..+.++.++++.|++|+|+.|+.++.++.+|.||+....++|.+||+|+|++||+++|++|+++++||.+
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 56789999999888889999999999999999998888999999998999999999999999999999999999999999
Q ss_pred EeCCCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCC
Q 008779 120 RSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGG 199 (554)
Q Consensus 120 ~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg 199 (554)
||||||+.+.+.....+|++|||++|++|++|++.++++||+|+++++|+++|.++|++++++.|.|+++||||+++|||
T Consensus 83 rggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg 162 (518)
T 3vte_A 83 RSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGG 162 (518)
T ss_dssp ESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCC
T ss_pred ECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCC
Confidence 99999998877533235999999999999999999999999999999999999999888999999999999999999999
Q ss_pred CCCccccccccccceeEEEEEecCCeeeccCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechh-hhH
Q 008779 200 YGIMLRKFGLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLE-QNA 278 (554)
Q Consensus 200 ~g~~~~~~G~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~-~~~ 278 (554)
+|+++++||+++|+|+++|||++||++++...+++|||||+|||++|+|||||+++||++|.|+.+..|.+.+.++ +++
T Consensus 163 ~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 242 (518)
T 3vte_A 163 YGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGL 242 (518)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHH
T ss_pred CccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHH
Confidence 9999999999999999999999999999754568999999999844899999999999999999888888887654 567
Q ss_pred HHHHHHHHHHHhhhcccceEEEEEEec---------CCeeEEEEEEEEeCCccCchhhhhhhcccCCCCCCcceecCHHH
Q 008779 279 TKIVHKWQYVANNLHEDLVIEVGLIKM---------NSSMVAVFSSLFLGGVDRLLPLMQESFPELGLKKGDCTEMSWIE 349 (554)
Q Consensus 279 ~~~~~~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 349 (554)
.+++.+||+++..+|+++++.+.+... .+.+.+.+.++|+|+++++.++|++.|++++....++.+++|++
T Consensus 243 ~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~ 322 (518)
T 3vte_A 243 VKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWID 322 (518)
T ss_dssp HHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHH
T ss_pred HHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhh
Confidence 889999999999999999998887641 12357888999999999999999988888887777889999999
Q ss_pred HHHhhccCCCC-Cc---hhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHHHHHHhhcCCceEEEEEEecC
Q 008779 350 SVHNLAGFDKG-QS---LDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYG 425 (554)
Q Consensus 350 ~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~~~i~~~~~G 425 (554)
++.++++.+.+ .+ ++.++++.. ..+.+||.||.|+.+++++++++.+++.+.+.+...+.+++++||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~G 393 (518)
T 3vte_A 323 TTIFYSGVVNFNTANFKKEILLDRSA---------GKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYG 393 (518)
T ss_dssp HHHHTSSSCCC-----CGGGGGCTTC---------SCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECC
T ss_pred hhhhhhcCCccCCccchhhhhccCCc---------CcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecC
Confidence 99888766544 34 455655543 344578999999998999999999999988744335889999999
Q ss_pred CccCCCCCCCCCCcccCCCeEEEEEEEeeCCCCcchHHHHHHHHHHHhccccccCCCCcccccCCCCCcC-CCCCCCcch
Q 008779 426 GKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIG-TNNQGYTSI 504 (554)
Q Consensus 426 Gav~~v~~~~TAf~~R~~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~NY~d~d~~-~~~~~~~~~ 504 (554)
|+|+++++++|||+||++++|.+++.+.|.++++++++++|++++++.|.||.+++++++|+||+|.|++ .+..+++++
T Consensus 394 Ga~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~ 473 (518)
T 3vte_A 394 GIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNY 473 (518)
T ss_dssp GGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCH
T ss_pred ccccCCCCCCCcccccCcceEEEEEEEecCCcchhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccch
Confidence 9999999999999999955899999999988888899999999999999999876778999999999887 433356677
Q ss_pred hhhhhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCccccC
Q 008779 505 EQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPLTSW 547 (554)
Q Consensus 505 ~~~~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~~~~~ 547 (554)
+.++.|+.+|||+||+||++||+||||+|||+++|||+|..+|
T Consensus 474 ~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~~ 516 (518)
T 3vte_A 474 TQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPH 516 (518)
T ss_dssp HHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCTT
T ss_pred hhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCCC
Confidence 7788999999999999999999999999999999999998775
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3.7e-89 Score=737.22 Aligned_cols=486 Identities=44% Similarity=0.815 Sum_probs=428.2
Q ss_pred hHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeC
Q 008779 43 LFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSG 122 (554)
Q Consensus 43 ~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 122 (554)
+|++||+..+.++ ++.|++|+|+.|+.++.++.+|.||+....++|.+|++|+|++||+++|++|+++++|+++|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 3789999886554 6889999999999988778999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCCC
Q 008779 123 GHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGI 202 (554)
Q Consensus 123 Ghs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~ 202 (554)
|||+.+.+...+.+|++|||++|++|++|++.++++||+|+++++|+++|.++|+|+++++|.|+++||||+++|||+|+
T Consensus 78 Gh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~ 157 (495)
T 3fw9_A 78 GHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGM 157 (495)
T ss_dssp CCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcc
Confidence 99998887765446899999999999999999999999999999999999999777999999999999999999999999
Q ss_pred ccccccccccceeEEEEEecCCeeeccCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechh-hhHHHH
Q 008779 203 MLRKFGLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLE-QNATKI 281 (554)
Q Consensus 203 ~~~~~G~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~-~~~~~~ 281 (554)
.+++||+.+|+|++++||++||+++++..+++|||||+|||++|+|||||+++||++|.|+.+..|.+.++++ +++.++
T Consensus 158 ~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 158 MSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp THHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred cccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 9999999999999999999999999854568999999999555899999999999999999888888887654 567889
Q ss_pred HHHHHHHHhhhcccceEEEEEEecCCeeEEEEEEEEeCCccCchhhhhhhcccCCCCCCcceecCHHHHHHhhccCCCCC
Q 008779 282 VHKWQYVANNLHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELGLKKGDCTEMSWIESVHNLAGFDKGQ 361 (554)
Q Consensus 282 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (554)
+..||+++.++|+++++.+...+..+...+.+.++|+|+++++.+.|++.|+++++...++.+++|++++.++++.+.
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-- 315 (495)
T 3fw9_A 238 LHKWQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET-- 315 (495)
T ss_dssp HHHHHHHHHHSCTTEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC--
T ss_pred HHHHHHHHhcCChhHeEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc--
Confidence 999999999999999988775433445678889999999999999998888888877778999999998887765432
Q ss_pred chhhhhccccccCCcccccC-CCCCceeeccccCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCccCCCCCCCCCCcc
Q 008779 362 SLDLLLDRNARSNGLVVKST-TKSPFKAKVDYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESETPFPH 440 (554)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~~~i~~~~~GGav~~v~~~~TAf~~ 440 (554)
++.++++.. . ++.+||.||.|+++++++++++.+++.+.+.+. +.++++++||+|+++++++|||+|
T Consensus 316 -~~~l~~~~~---------~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~h 383 (495)
T 3fw9_A 316 -VSQLNNRFL---------KFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPH 383 (495)
T ss_dssp -GGGGGCTTS---------CSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCC
T ss_pred -hhhhcCCCC---------CccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccc
Confidence 234444432 2 346799999999999999999999999987664 789999999999999999999999
Q ss_pred cCCCeEEEEEEEeeCCC--CcchHHHHHHHHHHHhccccccCCCCcccccCCCCCcCCCCC-----CCcchhhhhhhhhh
Q 008779 441 RAGNLYKIFYGVSWRGD--GISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQ-----GYTSIEQASIWGNK 513 (554)
Q Consensus 441 R~~~~~~i~~~~~W~~~--~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~NY~d~d~~~~~~-----~~~~~~~~~~yg~~ 513 (554)
|++++|.+++.+.|.++ ++++++++|++++++.|.||.+++++++|+||.|.|++.++. ++++++.++.|+++
T Consensus 384 R~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~ 463 (495)
T 3fw9_A 384 RSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGES 463 (495)
T ss_dssp CTTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHH
T ss_pred cCccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHH
Confidence 98668999999999764 577889999999999999998767788999999998863221 23556667789999
Q ss_pred hhhccHHHHHHhhhhcCCCCCCCCCCCCCccc
Q 008779 514 YFKNNFKRLVHVKTMVDPHNFFRNEQSIPPLT 545 (554)
Q Consensus 514 Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~~~ 545 (554)
|||+||+||++||++|||+|+|+++|||||..
T Consensus 464 Yyg~n~~RL~~vK~~yDP~n~F~~~qsI~p~~ 495 (495)
T 3fw9_A 464 YFLSNYERLIRAKTLIDPNNVFNHPQSIPPMA 495 (495)
T ss_dssp HHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HhHhHHHHHHHHHHhhCcHhhCCCCCCCCCCC
Confidence 99999999999999999999999999999863
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.6e-82 Score=691.14 Aligned_cols=489 Identities=48% Similarity=0.899 Sum_probs=418.7
Q ss_pred CChhhHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEE
Q 008779 39 HDENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIR 118 (554)
Q Consensus 39 ~~~~~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~ 118 (554)
+..++|++||.+.+. ...|++|+++.|...+..+.+|.||+....++|.+||+|+|++||+++|++|+++++||.
T Consensus 6 ~~~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~ 80 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIR 80 (500)
T ss_dssp ---CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred ccHHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEE
Confidence 467899999988753 356899999999999989999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCcccc--CCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhc
Q 008779 119 VRSGGHDFEGLSYVS--QVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFS 196 (554)
Q Consensus 119 v~ggGhs~~~~~~~~--~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ 196 (554)
+|||||++.|.+.+. .+++++|||++||+|++|++.++++||+|+++++|+++|.++|+++++++|.|++|||||+++
T Consensus 81 ~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 160 (500)
T 3tsh_A 81 VRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFA 160 (500)
T ss_dssp EESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHH
T ss_pred EEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccc
Confidence 999999998876542 235999999999999999999999999999999999999999988899999999999999999
Q ss_pred CCCCCCccccccccccceeEEEEEecCCeeeccCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechhh
Q 008779 197 GGGYGIMLRKFGLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQ 276 (554)
Q Consensus 197 ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~ 276 (554)
|||+|.++++||+++|||+++|||++||++++...+++|||||+|||++|+|||||+++||++|.|+.+..+.+.+...+
T Consensus 161 ~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 161 GGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred cccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 99999999999999999999999999999998666789999999988778999999999999999998888888777767
Q ss_pred hHHHHHHHHHHHHhhhcccceEEEEEEecCCeeEEEEEEEEeCCccCchhhhhhhcccCCCCCCcceecCHHHHHHhhcc
Q 008779 277 NATKIVHKWQYVANNLHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELGLKKGDCTEMSWIESVHNLAG 356 (554)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 356 (554)
.+.+++..|+.+.+.+|+++.+.+.... +...+.++|+|+.+++.+++.+.+++++.....+.+++|.+...++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 316 (500)
T 3tsh_A 241 GAVDIINKWQVVAPQLPADLMIRIIAQG----PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHL 316 (500)
T ss_dssp THHHHHHHHHHHGGGSCTTEEEEEEESS----SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccChhhEEEEEecC----CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhh
Confidence 7788999999999999999887766542 356778899999988888888888888877777888999987765443
Q ss_pred CCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCccCCCCCCCC
Q 008779 357 FDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESET 436 (554)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~~~i~~~~~GGav~~v~~~~T 436 (554)
.......+.+.++.. ....+.+.++.++.++++++.++.+++.+...+. ...++++++||++.++++++|
T Consensus 317 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~at 386 (500)
T 3tsh_A 317 GHRDALEDDLLNRQN---------SFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESAT 386 (500)
T ss_dssp CCSSCHHHHHHCCCC---------CCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSS
T ss_pred ccccccccccccccc---------cccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccC
Confidence 332222233333322 2334556677888888999888888887765554 356778999999999999999
Q ss_pred CCcccCCCeEEEEEEEeeCCCCcchHHHHHHHHHHHhccccccCCCCcccccCCCCCcCCCCC--CCcchhhhhhhhhhh
Q 008779 437 PFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQ--GYTSIEQASIWGNKY 514 (554)
Q Consensus 437 Af~~R~~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~NY~d~d~~~~~~--~~~~~~~~~~yg~~Y 514 (554)
+|+||++.+|.+++...|.+++++++..+|++++++.+.++.+..++++|+||+|.|++.+.. ....+...+.|++.|
T Consensus 387 a~~~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y 466 (500)
T 3tsh_A 387 PFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKY 466 (500)
T ss_dssp SCCCCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHH
T ss_pred cCcccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHh
Confidence 999999778999999999999999999999999999999998777789999999999874332 112344567899999
Q ss_pred hhccHHHHHHhhhhcCCCCCCCCCCCCCcccc
Q 008779 515 FKNNFKRLVHVKTMVDPHNFFRNEQSIPPLTS 546 (554)
Q Consensus 515 fg~n~~RL~~iK~kyDP~nvF~~~qsI~~~~~ 546 (554)
||+||+||++||+||||+|+|+++|||||..+
T Consensus 467 ~g~Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 467 FKGNFERLAITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp HGGGHHHHHHHHHHHCTTCCSCCTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhCcccccCCCCCCCCCCC
Confidence 99999999999999999999999999999654
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=2.9e-77 Score=643.26 Aligned_cols=456 Identities=25% Similarity=0.462 Sum_probs=380.4
Q ss_pred hHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeC
Q 008779 43 LFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSG 122 (554)
Q Consensus 43 ~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 122 (554)
+|.+||+++. ..+++|+|+.|+.++. . |+.+..+.|.+|++|+|++||+++|++|+++++|+.+|||
T Consensus 2 ~l~~cl~~~~-------~~v~~p~~~~y~~~~~--~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAG-------VPIDIPGTADYERDVE--P----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTT-------CCBCCTTSHHHHHHTC--C----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCC-------CcEECCCCCchHHHHH--H----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 5789999983 3489999999998743 3 5555567999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCeEEEEecCCCcEE-EcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCC
Q 008779 123 GHDFEGLSYVSQVPFVVIDLINLSKIS-VDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYG 201 (554)
Q Consensus 123 Ghs~~~~~~~~~~~gvvIdl~~l~~i~-vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g 201 (554)
|||+.+.+....+++++|||++|++|. +|++.++++||+|+++++|+++|.++| ++++|.|.|+++||||+++|||+|
T Consensus 69 Gh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G 147 (473)
T 3rja_A 69 GHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFG 147 (473)
T ss_dssp CCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCC
Confidence 999986554433358999999999996 999999999999999999999999997 478899999999999999999999
Q ss_pred CccccccccccceeEEEEEecCCeeec-cCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechh--hhH
Q 008779 202 IMLRKFGLAADNIVDAHLIDARGRLLD-RKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLE--QNA 278 (554)
Q Consensus 202 ~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~--~~~ 278 (554)
+.+++||+++|+|+++|||++||++++ ...+++||||++||++ |+|||||+++||++|.|+.+..+.+.+.++ +++
T Consensus 148 ~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~ 226 (473)
T 3rja_A 148 FSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSA 226 (473)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHH
T ss_pred cccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHH
Confidence 999999999999999999999999997 5556899999999997 899999999999999999888888877764 347
Q ss_pred HHHHHHHHHHHh-hhcccceEEEEEEecCCeeEEEEEEEEeCCccCchhhhhhhcccCC-CCCCcce-ecCHHHHHHhhc
Q 008779 279 TKIVHKWQYVAN-NLHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELG-LKKGDCT-EMSWIESVHNLA 355 (554)
Q Consensus 279 ~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~~~~~~~ 355 (554)
.+++++|+++.. ++|+++++.+.+.+. . .+.+.++|+|++++++++|++++...+ +...++. +++|+++..++.
T Consensus 227 ~~~~~~~~~~~~~~~p~~l~~~~~~~~~-~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~ 303 (473)
T 3rja_A 227 LKGIEAVEDYARWVAPREVNFRIGDYGA-G--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYS 303 (473)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEEESSS-S--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTS
T ss_pred HHHHHHHHHHhhhCCChhHEEEEEEcCC-C--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhh
Confidence 789999999988 899999988887521 1 267889999999999999887543333 3456778 999999876654
Q ss_pred cCCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHHHHHHhhcC-C---ceEEEEEEecCC---cc
Q 008779 356 GFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEE-G---ETAFIVLVPYGG---KM 428 (554)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~-~---~~~~i~~~~~GG---av 428 (554)
... +.+.. .. .....||.||.+.. ++++++++.+++.+.+.. . ..+.+++++||| ++
T Consensus 304 ~~~---~~~~~---~~---------~~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai 367 (473)
T 3rja_A 304 NFD---HVDFI---TP---------QPVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQV 367 (473)
T ss_dssp SSS---CCCCS---SC---------CCCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGG
T ss_pred cCC---Ccccc---cC---------CCCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhh
Confidence 321 10100 00 00245778888865 699999999999886532 1 346788999998 67
Q ss_pred CCCCCCCCCCcccCCCeEEEEEEEeeCC-CCcchHHHHHHHHHHHhccccccCCCCcccccCCCCCcCCCCCCCcchhhh
Q 008779 429 SEISESETPFPHRAGNLYKIFYGVSWRG-DGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQGYTSIEQA 507 (554)
Q Consensus 429 ~~v~~~~TAf~~R~~~~~~i~~~~~W~~-~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~NY~d~d~~~~~~~~~~~~~~ 507 (554)
+++++++|||+||+ .+|.+++.+.|.+ +..+++..+|++++++.+.+.....+.++|+||+|.+++ .
T Consensus 368 ~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~ 435 (473)
T 3rja_A 368 TKVTNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------R 435 (473)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------H
T ss_pred cCCCCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------c
Confidence 88899999999999 6999999999964 556667789998888887665433456899999998875 2
Q ss_pred hhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCcc
Q 008779 508 SIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPL 544 (554)
Q Consensus 508 ~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~~ 544 (554)
+.|++.|||+||+||++||+||||+|+|+++|||+|.
T Consensus 436 ~~~~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 436 DYATKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCC
T ss_pred hhHHHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCC
Confidence 3799999999999999999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=9.7e-74 Score=618.51 Aligned_cols=451 Identities=23% Similarity=0.378 Sum_probs=362.2
Q ss_pred ccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCe
Q 008779 58 ISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPF 137 (554)
Q Consensus 58 ~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~g 137 (554)
+.+.+++|+|+.|++++. .||.|| .+.|.+|++|+|++||+++|++|+++++||++||||||+.+.+.+.+ +|
T Consensus 8 ~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~g 80 (501)
T 3pop_A 8 VPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-RD 80 (501)
T ss_dssp -CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-CS
T ss_pred CCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-CE
Confidence 466799999999998863 556666 56999999999999999999999999999999999999988776532 48
Q ss_pred EEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHh-hCCCcccCCCCCCcccchhhhcCCCCCCccccccccccceeE
Q 008779 138 VVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIAD-KSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVD 216 (554)
Q Consensus 138 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~ 216 (554)
++|||++||+|++|++.++++||+|+++++|+++|.+ +| ++++.|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999975 55 78899999999999999999999999999999999999
Q ss_pred EEEEe--cCCe--eecc----CCCCcchHHHHhccCCCCceEEEEEEEEE----------Eec-CCeEEEEEEeechh--
Q 008779 217 AHLID--ARGR--LLDR----KSMGQDLFWAIRGGGGTSFGVVVAWKLRL----------VTV-PSTVTRFRITRTLE-- 275 (554)
Q Consensus 217 ~~vV~--~~G~--v~~~----~~~~~dl~~a~rg~~~g~fGiVt~~t~~l----------~p~-p~~~~~~~~~~~~~-- 275 (554)
+|||+ +||+ ++.. ..+++|||||+||||+|+|||||+++||+ +|. |..+..+.+.|+.+
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 4432 35679999999998559999999999999 665 44667777777643
Q ss_pred --hhHHHHHHHHHHHHh--hhccc----ceEEEEEEecCCeeEEEEEEEEeCCccCchhhhhhhccc------CCCCCCc
Q 008779 276 --QNATKIVHKWQYVAN--NLHED----LVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPE------LGLKKGD 341 (554)
Q Consensus 276 --~~~~~~~~~~~~~~~--~~~~~----l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~------l~~~~~~ 341 (554)
+.+.+++..|+++.. ..|++ +...+.+.... ...+.+..+|+|+.+++.+++++.+.. +.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~- 316 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVS-SGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPR- 316 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECGG-GCEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEE-
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCCC-CCeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccce-
Confidence 234577888888764 34544 34444444321 113556678899998888888775432 223333
Q ss_pred ceecCHHHHHHhhccCCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHHHHHHhhc-CCceEEEE
Q 008779 342 CTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEE-EGETAFIV 420 (554)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~-~~~~~~i~ 420 (554)
+.+++|.+....+. .+.+.+ ....++|.|+.|+.++++++.++.+++.+.+. +...+.++
T Consensus 317 ~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~ 377 (501)
T 3pop_A 317 GGVMSWLTGTRYMS-QADCGD------------------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVM 377 (501)
T ss_dssp EEEEEHHHHHHHTC-BCSCGG------------------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEE
T ss_pred eEEeCHHHHHhhhc-CCCCCc------------------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 78899998765432 111100 01234778899998889999999999988763 33457899
Q ss_pred EEecCCccCCCCCCCCCCcccCCCeEEEEEEEeeCCCCcchHHHHHHHHHHHhccccc------cCCCCcccccCCCCCc
Q 008779 421 LVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYV------SKNPREAYVNYRDLDI 494 (554)
Q Consensus 421 ~~~~GGav~~v~~~~TAf~~R~~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~------~~~~~~~Y~NY~d~d~ 494 (554)
++++||+|+++++++|||+||+ .+|++++.+.|.+++.++++.+|++++++.+.++. ++.+.++|+||+|.|+
T Consensus 378 ~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl 456 (501)
T 3pop_A 378 FNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADL 456 (501)
T ss_dssp EEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGG
T ss_pred EEecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccc
Confidence 9999999999999999999999 69999999999888888899999999999997553 2345789999999987
Q ss_pred CCCCCCCcchhhhhhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCc
Q 008779 495 GTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPP 543 (554)
Q Consensus 495 ~~~~~~~~~~~~~~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~ 543 (554)
+.+. .+++ +..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 457 ~~~~-~~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 457 LDPA-RNRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp GCTT-TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccc-cccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 6321 1111 2349999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=3.3e-69 Score=587.37 Aligned_cols=454 Identities=26% Similarity=0.455 Sum_probs=355.2
Q ss_pred HHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCC
Q 008779 45 LDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGH 124 (554)
Q Consensus 45 ~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh 124 (554)
.+||... ...+++|+|+.|+.++ ...||.||. ..|.+||+|+|++||+++|++|+++++||.+|||||
T Consensus 24 ~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 24 ERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp --CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred hhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 4898776 4579999999999886 246788884 489999999999999999999999999999999999
Q ss_pred CCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHh-hCCCcccCCCCCCcccchhhhcCCCCCCc
Q 008779 125 DFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIAD-KSKNLGFPGGVCPTVGVGGHFSGGGYGIM 203 (554)
Q Consensus 125 s~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~ 203 (554)
|+.+.+...+ ++++|||++||+|++|++.++|+||+|+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|++
T Consensus 92 ~~~g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~ 168 (523)
T 2wdx_A 92 CFEDFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPL 168 (523)
T ss_dssp CSSSSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTT
T ss_pred CCCCCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCcc
Confidence 9988765432 489999999999999999999999999999999999985 76 7889999999999999999999999
Q ss_pred cccccccccceeEEEEEecC--Ceeec---cCC-CCcc--hHHHHhccCCCCceEEEEEEEEE-----------EecCC-
Q 008779 204 LRKFGLAADNIVDAHLIDAR--GRLLD---RKS-MGQD--LFWAIRGGGGTSFGVVVAWKLRL-----------VTVPS- 263 (554)
Q Consensus 204 ~~~~G~~~d~v~~~~vV~~~--G~v~~---~~~-~~~d--l~~a~rg~~~g~fGiVt~~t~~l-----------~p~p~- 263 (554)
+++||+++|+|+++|||++| |+++. ... +++| ||||+|||++|+|||||+++||+ +|.|+
T Consensus 169 s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~ 248 (523)
T 2wdx_A 169 SRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPA 248 (523)
T ss_dssp HHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCS
T ss_pred cccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcc
Confidence 99999999999999999955 98743 222 4555 99999987658999999999999 99876
Q ss_pred eEEEEEEeechh----hhHHHHHHHHHHHHhh--hccc----ceEEEEEEec-CC--eeEEEEEEEEeCCccCchhhhhh
Q 008779 264 TVTRFRITRTLE----QNATKIVHKWQYVANN--LHED----LVIEVGLIKM-NS--SMVAVFSSLFLGGVDRLLPLMQE 330 (554)
Q Consensus 264 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~-~~--~~~~~~~~~~~G~~~~~~~~l~~ 330 (554)
.+..+.+.|+.+ +...++++.|+++... .|++ +...+.+... .+ .+.+.+..+|.|+.++..+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~ 328 (523)
T 2wdx_A 249 TLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDA 328 (523)
T ss_dssp EEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHH
T ss_pred cEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHH
Confidence 466777777643 2346778888887654 5655 3333333321 12 23566677899998887777776
Q ss_pred hccc----CC-CCCCcceecCHHHHHHhhccCCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHH
Q 008779 331 SFPE----LG-LKKGDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGI 405 (554)
Q Consensus 331 ~~~~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l 405 (554)
.+.. ++ +....+.+++|.+....+ .. ...+++.++.++.++++.+.++.+
T Consensus 329 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~------------~~~~~~~~s~~~~~~~~~~~~~~~ 383 (523)
T 2wdx_A 329 HIEAVIDGVPPAEVPEPIEQRWLASTPGR-------------GG------------RGPASKTKAGYLRKRLTDRQIQAV 383 (523)
T ss_dssp HHHHHHTTCTTCBCCCCEEEETTSSCCCC-------------CS------------SCCEEEEEEEEESSCCCHHHHHHH
T ss_pred HHHHHHhhcCCCccccceeccHHHHHHhh-------------cC------------CCCceeeecccccCCCCHHHHHHH
Confidence 4322 23 333444566665421100 00 011355677777667899999999
Q ss_pred HHHHhhcC-CceEEEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEEeeCCCCcchHHHHHHHHHHHhcc------ccc
Q 008779 406 YDKFYEEE-GETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMT------PYV 478 (554)
Q Consensus 406 ~~~~~~~~-~~~~~i~~~~~GGav~~v~~~~TAf~~R~~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~------~~~ 478 (554)
++.+.+.. ...+.+.++++||++.+++.++|||+||+ .+|++++.+.|.+++.++...+|++++++.+. |+.
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~ 462 (523)
T 2wdx_A 384 YENMTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVP 462 (523)
T ss_dssp HHHHTCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCS
T ss_pred HHHHHhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 99887532 24577889999999999999999999999 68999999999988888899999999999987 332
Q ss_pred cCCCCcccccCCCCCcCCCCCCCcchhhhhhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCc
Q 008779 479 SKNPREAYVNYRDLDIGTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPP 543 (554)
Q Consensus 479 ~~~~~~~Y~NY~d~d~~~~~~~~~~~~~~~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~ 543 (554)
+....++|+||+|.+++... .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|
T Consensus 463 ~~~~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 463 NDVSDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CSSBCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCCCCcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 11235799999999875211 11111 148999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=2.5e-68 Score=580.70 Aligned_cols=461 Identities=26% Similarity=0.429 Sum_probs=352.7
Q ss_pred hhhHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEE
Q 008779 41 ENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVR 120 (554)
Q Consensus 41 ~~~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ 120 (554)
.-+...|+... ...+++|+|+.|+.++ ...||.|| ...|.+||+|+|++||+++|++|+++++|+.+|
T Consensus 18 ~~~~~~~~~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vr 85 (521)
T 2ipi_A 18 EFDGGACGART-------ALVKVDRVDRRYQDLV-TRGFNGRF----RGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVR 85 (521)
T ss_dssp ------------------CCCEEESSSTTHHHHH-TCCSCTTC----CCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred hccccccccCC-------CCeEECCCCcchHHHH-hccccccc----cCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 33556788776 4568999999999876 24667777 458999999999999999999999999999999
Q ss_pred eCCCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHH-hhCCCcccCCCCCCcccchhhhcCCC
Q 008779 121 SGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIA-DKSKNLGFPGGVCPTVGVGGHFSGGG 199 (554)
Q Consensus 121 ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~g~~~~vgigG~~~ggg 199 (554)
||||++.+.+.... +|++|||++||+|++|++.++|+||+|+++++|+++|. ++| +.++.|.|+++||||+++|||
T Consensus 86 ggGh~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg 162 (521)
T 2ipi_A 86 SGGHCFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGG 162 (521)
T ss_dssp SSCCCTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTC
T ss_pred CCCcCCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCC
Confidence 99999988665332 48999999999999999999999999999999999997 676 788999999999999999999
Q ss_pred CCCccccccccccceeEEEEEecC--Ceeec---cCC-CCc--chHHHHhccCCCCceEEEEEEEEE-----------Ee
Q 008779 200 YGIMLRKFGLAADNIVDAHLIDAR--GRLLD---RKS-MGQ--DLFWAIRGGGGTSFGVVVAWKLRL-----------VT 260 (554)
Q Consensus 200 ~g~~~~~~G~~~d~v~~~~vV~~~--G~v~~---~~~-~~~--dl~~a~rg~~~g~fGiVt~~t~~l-----------~p 260 (554)
+|+++++||+++|+|+++|||++| |+++. ... +++ |||||+|||++|+|||||+++||+ +|
T Consensus 163 ~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p 242 (521)
T 2ipi_A 163 YGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLP 242 (521)
T ss_dssp CCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSC
T ss_pred CCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccC
Confidence 999999999999999999999977 98642 221 445 499999997558999999999999 99
Q ss_pred cCC-eEEEEEEeechh----hhHHHHHHHHHHHHhh--hccc----ceEEEEEEecCCeeEEEEEEEEeCCccCchhhhh
Q 008779 261 VPS-TVTRFRITRTLE----QNATKIVHKWQYVANN--LHED----LVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQ 329 (554)
Q Consensus 261 ~p~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~ 329 (554)
.|+ .+..+.+.|+.+ +...++++.|+++... .|++ +...+.+..... ..+.+..+|.|+.++..++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~l~ 321 (521)
T 2ipi_A 243 KAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSRAA-GQILLDIQIDGGLDGAEALLN 321 (521)
T ss_dssp BCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECTTS-CEEEEEEEEETTSTTHHHHHH
T ss_pred CCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccCCC-CceEEEEEeccCHHHHHHHHH
Confidence 875 455666666542 2345778888887654 4554 444444433211 134556678999888777776
Q ss_pred hhcc---c-CC-CCCCcceecCHHHHHHhhccCCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHH
Q 008779 330 ESFP---E-LG-LKKGDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEG 404 (554)
Q Consensus 330 ~~~~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~ 404 (554)
+.+. + ++ +....+..++|.+........+ . . ..+++.++.++.++++.+.++.
T Consensus 322 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~---------~-~~~~~~~s~~~~~~~~~~~i~~ 379 (521)
T 2ipi_A 322 DFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDT------------G---------G-FDRTKSKGAYLRKPWTAAQAAT 379 (521)
T ss_dssp HHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCC------------T---------T-CCEEEEEEEEESSCCCHHHHHH
T ss_pred HHHHHHHhhcCCCccceeeecCHHHHHHhhcCCC------------C---------C-CccceeeccccccCCCHHHHHH
Confidence 6432 2 23 2334556788988543221100 0 0 0234556777776789999999
Q ss_pred HHHHHhhcCCceEEEEEEecCCccCCCCCCCCCCcccCCCeEEEEEEEeeCCCCcchHHHHHHHHHHHhccccc------
Q 008779 405 IYDKFYEEEGETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYV------ 478 (554)
Q Consensus 405 l~~~~~~~~~~~~~i~~~~~GGav~~v~~~~TAf~~R~~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~------ 478 (554)
+++.+.+.+...+.+.++++||++.+++.++|||+||+ .+|.+++.+.|.++++++...+|++++++.+....
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~ 458 (521)
T 2ipi_A 380 LYRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVP 458 (521)
T ss_dssp HHHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCS
T ss_pred HHHHHHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 99998875545678899999999999999999999999 68999999999988888889999999999987321
Q ss_pred cCCCCcccccCCCCCcCCCCCCCcchhhhhhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCcc
Q 008779 479 SKNPREAYVNYRDLDIGTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPL 544 (554)
Q Consensus 479 ~~~~~~~Y~NY~d~d~~~~~~~~~~~~~~~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~~ 544 (554)
.....++|+||+|.+++... .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 459 ~~~~~g~Y~Ny~d~~~~~~~-~~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 459 DDRTEGTFINYPDVDLVDER-WNTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SSSBCCCCTTSCCGGGGCTT-TSCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cCCCCceEeCCCCccccccc-cccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 11235799999999875211 01111 1489999999999999999999999999999999985
No 8
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.7e-68 Score=580.07 Aligned_cols=463 Identities=22% Similarity=0.403 Sum_probs=367.2
Q ss_pred ChhhHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEE
Q 008779 40 DENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRV 119 (554)
Q Consensus 40 ~~~~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v 119 (554)
..+.|.+|+... ...+++|+++.|.... .+|+.+....|.+|++|+|++||+++|++|+++++|+.+
T Consensus 5 ~~~~l~~~l~~~-------~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 5 EFNSINACLAAA-------DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp TTCHHHHHHHHT-------TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhhCcC-------CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 456789999865 2247889999998763 245555567999999999999999999999999999999
Q ss_pred EeCCCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCC
Q 008779 120 RSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGG 199 (554)
Q Consensus 120 ~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg 199 (554)
||||||+.+.+.+..+++++|||++|++|++| +.++|+||+|+++.+|+++|.+++ ++.+|.|.|+++||||+++|||
T Consensus 72 ~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg 149 (503)
T 1zr6_A 72 KGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGG 149 (503)
T ss_dssp ESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCC
T ss_pred ECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCC
Confidence 99999998766542234899999999999999 888999999999999999998876 5889999999999999999999
Q ss_pred CCCccccccccccceeEEEEEecCCeeec-cCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechh-hh
Q 008779 200 YGIMLRKFGLAADNIVDAHLIDARGRLLD-RKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLE-QN 277 (554)
Q Consensus 200 ~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~-~~ 277 (554)
+|+++++||+++|+|+++|||++||++++ ...+++|||||+|||+ |+|||||+++||++|.|+....+.+.+..+ +.
T Consensus 150 ~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~ 228 (503)
T 1zr6_A 150 YGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQ 228 (503)
T ss_dssp CSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHH
T ss_pred CCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHH
Confidence 99999999999999999999999999997 5557899999999998 799999999999999998777777666543 44
Q ss_pred HHHHHHHHHHHHhh-hcccceEEEEEEecCCeeEEEEEEEEeCCccCchhhhhhhcccCCC--CCCcceecCHHHHHHhh
Q 008779 278 ATKIVHKWQYVANN-LHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELGL--KKGDCTEMSWIESVHNL 354 (554)
Q Consensus 278 ~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~~ 354 (554)
+.++++.|+++... +|+++++.+.+... .+.+.++|+|+.+++.+++++++..++. ....+..++|.+....+
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (503)
T 1zr6_A 229 HVAGLKALQDWAQNTMPRELSMRLEINAN----ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTY 304 (503)
T ss_dssp HHHHHHHHHHHHHHTCCTTBCCEEEEETT----EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTS
T ss_pred HHHHHHHHHHHHhhcCChhHEEEEEEeCC----eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHH
Confidence 67888999998876 89998887776542 5667789999998888888875443433 12345677888755332
Q ss_pred ccCCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHHHHHHh-hcCC---ceEEEEEEecCC---c
Q 008779 355 AGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFY-EEEG---ETAFIVLVPYGG---K 427 (554)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~-~~~~---~~~~i~~~~~GG---a 427 (554)
.+.. .++... + ...+..++.++.++++ ++.+.++.+++.+. +... ..+.+.++++|| +
T Consensus 305 ~~~~-------~~~~~~------p-~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~a 369 (503)
T 1zr6_A 305 LYGA-------DLNITY------N-YDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSA 369 (503)
T ss_dssp CTTC-------CSSCSS------C-CCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCS
T ss_pred cCCC-------cccccC------C-CCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhh
Confidence 2100 001100 0 0122346778888877 89999999999887 5332 235788999999 8
Q ss_pred cCCCCCCCCCCcccCCCeEEEEEEEee-----CCCCcchHHHHHHHHHHHhccccccCCCCcccccCCCCCcCCCCCCCc
Q 008779 428 MSEISESETPFPHRAGNLYKIFYGVSW-----RGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQGYT 502 (554)
Q Consensus 428 v~~v~~~~TAf~~R~~~~~~i~~~~~W-----~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~NY~d~d~~~~~~~~~ 502 (554)
+.+++.++|+|+||+ .+|.+++...| .++..++...+|++++++.+.........++|+||+|.+++
T Consensus 370 v~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------- 441 (503)
T 1zr6_A 370 LAAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------- 441 (503)
T ss_dssp GGGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-------
T ss_pred hcCCCcccCCccccc-ceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-------
Confidence 999999999999999 68888887777 34444566678888877776654321123799999998765
Q ss_pred chhhhhhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCccccCCcc
Q 008779 503 SIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPLTSWRKK 550 (554)
Q Consensus 503 ~~~~~~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~~~~~~~~ 550 (554)
...|...|||+||+||++||+||||+|+|+++|+|+| ..|...
T Consensus 442 ----~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~-~~w~~~ 484 (503)
T 1zr6_A 442 ----KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEP-IAYLEQ 484 (503)
T ss_dssp ----HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCC-CCC---
T ss_pred ----cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCc-hhhhhh
Confidence 2368899999999999999999999999999999987 467543
No 9
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.3e-67 Score=575.28 Aligned_cols=450 Identities=26% Similarity=0.458 Sum_probs=351.3
Q ss_pred ceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEE
Q 008779 60 QVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVV 139 (554)
Q Consensus 60 ~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvv 139 (554)
..|++|+|+.|+.++. .||.|| ...|.+|++|+|++||+++|++|+++++||.|||||||+.+.+.... +|++
T Consensus 34 ~~v~~p~~~~Y~~~~~--~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~gvv 106 (530)
T 2y3s_A 34 IDSVAPGDIRYEDLRR--GENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VRVV 106 (530)
T ss_dssp CCEECTTSTTHHHHTC--CSCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CCEE
T ss_pred ceEECCCCccHHHHHh--Hhhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-CeEE
Confidence 4589999999999864 557777 45899999999999999999999999999999999999988665432 4899
Q ss_pred EEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHh-hCCCcccCCCCCCcccchhhhcCCCCCCccccccccccceeEEE
Q 008779 140 IDLINLSKISVDAKQKTAWVQSGATLGQLYYRIAD-KSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAH 218 (554)
Q Consensus 140 Idl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~ 218 (554)
|||++|++|++|++.++|+||+|+++.+|+++|.+ +| ++++.|.|++|||||+++|||+|+++++||+++|+|+++|
T Consensus 107 Idl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~e 184 (530)
T 2y3s_A 107 MDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVE 184 (530)
T ss_dssp EECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEE
T ss_pred EEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEE
Confidence 99999999999999999999999999999999986 66 7889999999999999999999999999999999999999
Q ss_pred EEe--cCCeeec---cCC-CCcc--hHHHHhccCCCCceEEEEEEEEE------------EecCC-eEEEEEEeechh--
Q 008779 219 LID--ARGRLLD---RKS-MGQD--LFWAIRGGGGTSFGVVVAWKLRL------------VTVPS-TVTRFRITRTLE-- 275 (554)
Q Consensus 219 vV~--~~G~v~~---~~~-~~~d--l~~a~rg~~~g~fGiVt~~t~~l------------~p~p~-~~~~~~~~~~~~-- 275 (554)
||+ ++|+++. ... +++| ||||+||+++|+|||||+++||+ +|.|+ .+..+.+.|+.+
T Consensus 185 vV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 264 (530)
T 2y3s_A 185 VVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGL 264 (530)
T ss_dssp EEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTC
T ss_pred EEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEeccccc
Confidence 999 5599742 222 4555 99999997658999999999999 88875 566666666542
Q ss_pred --hhHHHHHHHHHHHHhh--hccc----ceEEEEEEecCCeeEEEEEEEEeCCccCchhhhhhhcc---c-CC-CCCCcc
Q 008779 276 --QNATKIVHKWQYVANN--LHED----LVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFP---E-LG-LKKGDC 342 (554)
Q Consensus 276 --~~~~~~~~~~~~~~~~--~~~~----l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~---~-l~-~~~~~~ 342 (554)
+...++++.|+++... .|++ +...+.+.... ...+.+...|.|+.++..+++++.+. + ++ +....+
T Consensus 265 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~~ 343 (530)
T 2y3s_A 265 DEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRSQ-SGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDT 343 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECGG-GSEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEEE
T ss_pred CHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccCC-CCcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCcccee
Confidence 2345778888887654 4554 34344443321 11345566789998887777776432 2 33 333456
Q ss_pred eecCHHHHHHhhccCCCCCchhhhhccccccCCcccccCCCCCceeeccccCCCCCHHHHHHHHHHHhhcC--CceEEEE
Q 008779 343 TEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEE--GETAFIV 420 (554)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~--~~~~~i~ 420 (554)
..++|.+....+...+ .. .....++.++.++.++++.+.++.+++.+.+.+ ...+.+.
T Consensus 344 ~~~~~~~~~~~~~~~~----------~~----------~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 403 (530)
T 2y3s_A 344 RRLPWLHSTRWPGIAG----------DG----------DMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVA 403 (530)
T ss_dssp EEEEHHHHTTCHHHHC----------CC----------CCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEE
T ss_pred eeccHHHHHHhhcCCC----------CC----------cccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEE
Confidence 7788987543221100 00 001235667888877789999999999987642 2346788
Q ss_pred EEecCCccCCCCCCCCCCcccCCCeEEEEEEEeeCCCCcchHHHHHHHHHHHhcc------ccccCCCCcccccCCCCCc
Q 008779 421 LVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMT------PYVSKNPREAYVNYRDLDI 494 (554)
Q Consensus 421 ~~~~GGav~~v~~~~TAf~~R~~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~------~~~~~~~~~~Y~NY~d~d~ 494 (554)
++++||++.+++.++|||+||+ .+|.+++.+.|.+++.+++..+|++++++.+. |+.+....++|+||+|.++
T Consensus 404 ~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~ 482 (530)
T 2y3s_A 404 LIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDL 482 (530)
T ss_dssp EEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGG
T ss_pred EEecCCccccCCCCcCcccccc-cceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccc
Confidence 9999999999999999999999 68999999999988888899999999999887 3311123579999999987
Q ss_pred CCCCCCCcchhhhhhhhhhhhhccHHHHHHhhhhcCCCCCCCCCCCCCcc
Q 008779 495 GTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPL 544 (554)
Q Consensus 495 ~~~~~~~~~~~~~~~yg~~Yfg~n~~RL~~iK~kyDP~nvF~~~qsI~~~ 544 (554)
+.+. .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 483 ~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 483 ADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 6211 11221 2489999999999999999999999999999999986
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=9.4e-65 Score=545.90 Aligned_cols=434 Identities=23% Similarity=0.304 Sum_probs=343.0
Q ss_pred cceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeE
Q 008779 59 SQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFV 138 (554)
Q Consensus 59 ~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gv 138 (554)
.+.|++|+++.|+..+. +|+.+....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+... +|+
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--CeE
Confidence 56799999999998643 4666667899999999999999999999999999999999999998866443 489
Q ss_pred EEEecCCCcEEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCCCccccccccccceeEEE
Q 008779 139 VIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAH 218 (554)
Q Consensus 139 vIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~ 218 (554)
+|||++|++|++|++..+|+||+|+++.+|+++|.++| +.++.|.|+++||||+++|||+|+++++||+.+|+|+++|
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99999999999999999999999999999999999986 7889999999999999999999999999999999999999
Q ss_pred EEecCCeeec-cCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechhhhHH--HHHHHHHHHHhhhccc
Q 008779 219 LIDARGRLLD-RKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNAT--KIVHKWQYVANNLHED 295 (554)
Q Consensus 219 vV~~~G~v~~-~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 295 (554)
||++||++++ ...+++|||||+|||+ |+|||||+++||++|.|+.+..+.+.++.++ .. ++++.|+++...+|+.
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTTTT
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCcHh
Confidence 9999999997 5556899999999998 8999999999999999776666666666532 44 7888899888777877
Q ss_pred ceEEEEEEe-cCCeeEEEEEEEEeCCccCchhhhhhhcccCC-CCCCcceecCHHHHHHhhccCCCCCchhhhhcccccc
Q 008779 296 LVIEVGLIK-MNSSMVAVFSSLFLGGVDRLLPLMQESFPELG-LKKGDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARS 373 (554)
Q Consensus 296 l~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (554)
+...+.+.. ..+...+.+...|.|+.++..+.+++. .++. +....+..++|.+...... ..+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-- 308 (459)
T 2bvf_A 241 IYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNA---------EVGSFED-- 308 (459)
T ss_dssp CCCEEEEEECTTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHH---------HHSCCCC--
T ss_pred hccccccCcccCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccc---------ccccCCC--
Confidence 744332221 123445666778999987777777753 4453 3334567788887443210 0000011
Q ss_pred CCcccccCCCCCcee-eccccCCCCCHHHHHHHHHHHhhcC-Cc-eEEEEEEecCCccCCCCCCCCCCcccCCCeEEEEE
Q 008779 374 NGLVVKSTTKSPFKA-KVDYVKQPIPENAFEGIYDKFYEEE-GE-TAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFY 450 (554)
Q Consensus 374 ~~~~~~~~~~~~~~~-~s~~~~~~l~~~~i~~l~~~~~~~~-~~-~~~i~~~~~GGav~~v~~~~TAf~~R~~~~~~i~~ 450 (554)
. ...+.. ++.+++++++.+.++.+++.+.+.+ .. .+.++ .+||++.+ .+.|||+||+ ..| +++
T Consensus 309 -------~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~gg~~~~--~~~ta~~~R~-~~~-~~~ 374 (459)
T 2bvf_A 309 -------G-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLE--IEGMPFGN--PKRTPARHRD-AMG-VLA 374 (459)
T ss_dssp -------S-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEE--EECCCCCC--TTCCSSCCCS-SCE-EEE
T ss_pred -------C-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEE--EeCCccCC--CCCCCcccCC-cce-EEE
Confidence 1 112322 5666663466677777777776544 32 23334 44888776 6789999999 578 889
Q ss_pred EEeeCCCC-cchHHHHHHHHHHHhccccccCCCCcccccCCCCCcCCCCCCCcchhhhhhhhhhhhhcc-HHHHHHhhhh
Q 008779 451 GVSWRGDG-ISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQGYTSIEQASIWGNKYFKNN-FKRLVHVKTM 528 (554)
Q Consensus 451 ~~~W~~~~-~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~NY~d~d~~~~~~~~~~~~~~~~yg~~Yfg~n-~~RL~~iK~k 528 (554)
...|.++. .++...+|++++++.+.++......++|+||+|.+.+ .|...|||+| |+||++||+|
T Consensus 375 ~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~~-------------~~~~~~yG~~n~~rL~~iK~k 441 (459)
T 2bvf_A 375 LAEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVTA-------------EMVAEVYKPEVYSRLAAVKRE 441 (459)
T ss_dssp EEEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCCH-------------HHHHHHHCHHHHHHHHHHHHH
T ss_pred EEEeCCCccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcch-------------HHHHHHhCcchHHHHHHHHHH
Confidence 99998876 6778899999999999998521135789999997632 6889999986 9999999999
Q ss_pred cCCCCCCCCCCCCCc
Q 008779 529 VDPHNFFRNEQSIPP 543 (554)
Q Consensus 529 yDP~nvF~~~qsI~~ 543 (554)
|||+|+|+++|+|+|
T Consensus 442 yDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 442 YDPENRFRHNYNIDP 456 (459)
T ss_dssp HCTTCCCCSSSCCCC
T ss_pred hCcccccCCCCCCCC
Confidence 999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=4.6e-40 Score=359.95 Aligned_cols=217 Identities=18% Similarity=0.282 Sum_probs=173.8
Q ss_pred ChhhHHHHHccCCCCCCCccceeecCCCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHH--c-CCc
Q 008779 40 DENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKK--H-GFQ 116 (554)
Q Consensus 40 ~~~~~~~cl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~--~-~~~ 116 (554)
..+++.+||..... .+.+.+ +...+... ...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 45677888877422 234554 22223222 223666567799999999999999999999998 6 999
Q ss_pred EEEEeCCCCCCCCccccCCCeEEEEecCCCc------EEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCC-CCCCcc
Q 008779 117 IRVRSGGHDFEGLSYVSQVPFVVIDLINLSK------ISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPG-GVCPTV 189 (554)
Q Consensus 117 v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~------i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~v 189 (554)
+.++|||||+.+.+.+.+ |++|||++||+ +++|+++.+++||||+++.+|++++.++| +..+. +.+..+
T Consensus 98 v~~~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~ 173 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYL 173 (534)
T ss_dssp EEEESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCS
T ss_pred EEEECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCE
Confidence 999999999998777654 89999999998 48998889999999999999999999987 55444 334678
Q ss_pred cchhhhcCCCCCCccccccccccceeEEEEEecCCeeec-cCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEE
Q 008779 190 GVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLD-RKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRF 268 (554)
Q Consensus 190 gigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~ 268 (554)
+|||.+++||.|..+++||.++|+|+++|||++||++++ ...+++||||++|||+ |+|||||+++||++|.|+....+
T Consensus 174 tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~ 252 (534)
T 1w1o_A 174 TVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWV 252 (534)
T ss_dssp BHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEE
T ss_pred EeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEE
Confidence 999999999999999999999999999999999999997 4557899999999998 89999999999999999977666
Q ss_pred EEeec
Q 008779 269 RITRT 273 (554)
Q Consensus 269 ~~~~~ 273 (554)
.+.+.
T Consensus 253 ~~~~~ 257 (534)
T 1w1o_A 253 RFVYT 257 (534)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 66664
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=1.1e-33 Score=308.01 Aligned_cols=196 Identities=19% Similarity=0.335 Sum_probs=165.9
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcEEEcC-----CC-
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKK-HGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDA-----KQ- 154 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~-----~~- 154 (554)
.|+......|.+|++|+|++||+++|++|++ +++||.+||||||+.+.+.+.+ |++|||++||+|+||+ +.
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 3665567799999999999999999999996 9999999999999998776554 8999999999987776 55
Q ss_pred -CEEEEcCCCcHHHHHHHHH-hhCCCcccCC-CCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeec-cC
Q 008779 155 -KTAWVQSGATLGQLYYRIA-DKSKNLGFPG-GVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLD-RK 230 (554)
Q Consensus 155 -~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~ 230 (554)
.+|+||||+++.++++++. ++| +..+. +.++.++|||+++++|.|..+.+||.+.|+|++++||++||++++ ..
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 7999999999999866554 887 44332 345678999999999999999999999999999999999999997 44
Q ss_pred CCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechhhhHHHHH
Q 008779 231 SMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIV 282 (554)
Q Consensus 231 ~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~~~~ 282 (554)
.+++||||+++|+. |+|||||+++||++|.|+...++.+.|..-+.+.+.+
T Consensus 209 ~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~ 259 (524)
T 2exr_A 209 IENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDA 259 (524)
T ss_dssp SSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHH
T ss_pred CCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHH
Confidence 46799999999998 9999999999999999997777667665433333333
No 13
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=2.7e-33 Score=312.85 Aligned_cols=201 Identities=18% Similarity=0.219 Sum_probs=173.7
Q ss_pred cCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCcccc---CCCeEEEEecCCCcE-EEcCCCCEEE
Q 008779 83 FSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVS---QVPFVVIDLINLSKI-SVDAKQKTAW 158 (554)
Q Consensus 83 ~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~---~~~gvvIdl~~l~~i-~vd~~~~~v~ 158 (554)
|.......|.+||+|+|+|||+++|++|+++++||.++|||||+.+...+. ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 555556799999999999999999999999999999999999987655432 235899999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeec-----cCCCC
Q 008779 159 VQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLD-----RKSMG 233 (554)
Q Consensus 159 v~aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-----~~~~~ 233 (554)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|+.+.+||.+.|+|+++|||++||++++ +...+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999985444445777889999999999999999999999999999999999999985 23457
Q ss_pred cchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechhhhHHHHHHH
Q 008779 234 QDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHK 284 (554)
Q Consensus 234 ~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~~~~~~ 284 (554)
+||+|+++|+. |+|||||+++|||+|.|+....+.+.|+.-+++.+++..
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~ 407 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLRE 407 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHH
Confidence 89999999998 999999999999999999877777777643444444433
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=4e-31 Score=284.24 Aligned_cols=178 Identities=21% Similarity=0.286 Sum_probs=159.2
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcE-EEcCCCCEEE
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKH--GFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKI-SVDAKQKTAW 158 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~--~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~ 158 (554)
+|.. ..+.|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+... +|++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4743 578999999999999999999999999 79999999999997665433 4899999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHhhCCCcccCC-CCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeec-cCC-CCcc
Q 008779 159 VQSGATLGQLYYRIADKSKNLGFPG-GVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLD-RKS-MGQD 235 (554)
Q Consensus 159 v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~-~~~d 235 (554)
||||+++.+|+++|.++| +.++. +..+.++|||.+++|++|..+.+||...|+|++++||++||++++ ... +++|
T Consensus 112 v~aGv~l~~L~~~l~~~G--l~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~d 189 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFG--LWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAE 189 (481)
T ss_dssp EETTCBHHHHHHHHGGGT--EECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHH
T ss_pred EcCCccHHHHHHHHHHcC--CEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChH
Confidence 999999999999999987 55553 333568999999999999999999999999999999999999997 444 6899
Q ss_pred hHHHHhccCCCCceEEEEEEEEEEecCCeE
Q 008779 236 LFWAIRGGGGTSFGVVVAWKLRLVTVPSTV 265 (554)
Q Consensus 236 l~~a~rg~~~g~fGiVt~~t~~l~p~p~~~ 265 (554)
||||+|||. |+|||||+++||++|.|+..
T Consensus 190 Lf~a~rgs~-G~~GIIt~~tl~l~p~~~~~ 218 (481)
T 4feh_A 190 LFWATVGGN-GLTGIIMRATIEMTPTSTAY 218 (481)
T ss_dssp HHHHHTTCT-TTTCEEEEEEEECEECSCSE
T ss_pred HHHHhhccC-CCceEEEEEEEEEEeCCccE
Confidence 999999998 89999999999999998643
No 15
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.3e-30 Score=277.23 Aligned_cols=175 Identities=21% Similarity=0.288 Sum_probs=155.7
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcE-EEcCCCCEEEEc
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKI-SVDAKQKTAWVQ 160 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~ 160 (554)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+.+ +.+|++|||++||+| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 47777788999999999999999999999 899999999999887763 224899999999997 999999999999
Q ss_pred CCCcHHHHHHHHHhhCCCcccCC-CCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeec-cCCCCcchHH
Q 008779 161 SGATLGQLYYRIADKSKNLGFPG-GVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLD-RKSMGQDLFW 238 (554)
Q Consensus 161 aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~-~~~~~~dl~~ 238 (554)
||+++.+|.++|.++| +.++. +.++.++|||.+++|++|.. .+||...|+|+++++|++||++++ ...+++ ||
T Consensus 87 aG~~l~~l~~~l~~~G--l~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARG--LALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTT--EECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcC--CcccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 9999999999999997 45664 77888999999999999976 699999999999999999999997 333444 89
Q ss_pred HHhccCCCCceEEEEEEEEEEecCCeEEE
Q 008779 239 AIRGGGGTSFGVVVAWKLRLVTVPSTVTR 267 (554)
Q Consensus 239 a~rg~~~g~fGiVt~~t~~l~p~p~~~~~ 267 (554)
+++|+. |++||||+++||++|.|+....
T Consensus 162 ~~~g~~-G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 162 GAVTSL-GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GTSSCT-TTTCEEEEEEEECEECCEEEEE
T ss_pred eEEecC-CCCEEEEEEEEEEEecCceEEE
Confidence 999998 8999999999999999885433
No 16
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.3e-32 Score=290.89 Aligned_cols=204 Identities=22% Similarity=0.273 Sum_probs=175.4
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcE-EEcCCCCEEEEc
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKI-SVDAKQKTAWVQ 160 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~ 160 (554)
.|+......|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.. ++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 47655677999999999999999999999999999999999999998777643 5899999999998 899999999999
Q ss_pred CCCcHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeecc------CCCCc
Q 008779 161 SGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLDR------KSMGQ 234 (554)
Q Consensus 161 aG~~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~~------~~~~~ 234 (554)
||+++.+|.++|.++|+.+.+..+.+..++|||++++++.|..+.+||.+.|+|+++|||++||++++. ...++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 999999999999998743233336667899999999999999999999999999999999999999852 33578
Q ss_pred chHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechhhhHHHHHHHHHH
Q 008779 235 DLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQY 287 (554)
Q Consensus 235 dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (554)
||+|+++|++ |+|||||+++||++|.|+....+.+.++..+++.+++..+++
T Consensus 202 dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 9999999998 899999999999999999776666666544445555555544
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=3.4e-31 Score=290.94 Aligned_cols=197 Identities=19% Similarity=0.250 Sum_probs=167.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccC--CCeEEEEecCCCcE-EEcCCCCEEEEcCCC
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQ--VPFVVIDLINLSKI-SVDAKQKTAWVQSGA 163 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~--~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~ 163 (554)
....|.+|++|+|++||+++|++|+++++||.++|||||+.+.+.+.. +++|+|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 356899999999999999999999999999999999999987666531 35899999999999 999999999999999
Q ss_pred cHHHHHHHHHhhCCCcccCCCC--CCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeec----cCCCCcchH
Q 008779 164 TLGQLYYRIADKSKNLGFPGGV--CPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLD----RKSMGQDLF 237 (554)
Q Consensus 164 ~~~~l~~~l~~~g~~l~~~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~----~~~~~~dl~ 237 (554)
++.+|.++|.++| +.++... ...++|||++++|++|+.+.+||.++|+|+++|||++||++++ +...++||+
T Consensus 214 ~~~~l~~~l~~~G--l~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~ 291 (584)
T 2uuu_A 214 MGPELEKQLHKQG--VSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYK 291 (584)
T ss_dssp BHHHHHHHHHHTT--EECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTH
T ss_pred cHHHHHHHHHHcC--CeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchh
Confidence 9999999999987 5555533 3568999999999999999999999999999999999999886 344689999
Q ss_pred HHHhccCCCCceEEEEEEEEEEecCCeEEEEEEeechhhhHHHHHHHHH
Q 008779 238 WAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQ 286 (554)
Q Consensus 238 ~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~ 286 (554)
|+++|+. |+|||||+++||++|.|+....+.+.++..+++.+++..+.
T Consensus 292 ~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 292 HIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 9999998 89999999999999999977677777754333444444443
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=1.5e-29 Score=275.97 Aligned_cols=199 Identities=23% Similarity=0.328 Sum_probs=165.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCC-CCccccCCCeEEEEecCCCcE-EEcCCCCEEEEcCCCc
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFE-GLSYVSQVPFVVIDLINLSKI-SVDAKQKTAWVQSGAT 164 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~-~~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~ 164 (554)
....|.+|++|+|++||+++|++|+++++|+.++|+|||+. +.+.+...+|++|||++||+| ++|+++++++||||++
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~ 132 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVT 132 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCC
Confidence 35689999999999999999999999999999999999986 654432224899999999999 9999999999999999
Q ss_pred HHHHHHHHHhhCCCcccCCC---CCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeeccC---CCCcchHH
Q 008779 165 LGQLYYRIADKSKNLGFPGG---VCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLDRK---SMGQDLFW 238 (554)
Q Consensus 165 ~~~l~~~l~~~g~~l~~~~g---~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~~~---~~~~dl~~ 238 (554)
+.+|+++|.++| +.++.+ ....+||||.+++||.|.. +||...|+|+++|||++||++++.. .+++|+|+
T Consensus 133 ~~~l~~~l~~~G--l~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~ 208 (520)
T 1wvf_A 133 FGQMYDYIQENN--LPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQ 208 (520)
T ss_dssp HHHHHHHHHHTT--CSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTT
T ss_pred HHHHHHHHHHcC--CcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHh
Confidence 999999999987 455544 2236899999999998886 9999999999999999999999732 35788877
Q ss_pred HHhccCC---------CCceEEEEEEEEEEecCCeEEEEEEeechhhhHHHHHHHHHHHH
Q 008779 239 AIRGGGG---------TSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQYVA 289 (554)
Q Consensus 239 a~rg~~~---------g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (554)
+.||+.+ ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 209 ~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 209 IFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp TCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 7776642 48999999999999999977777777765445555555566554
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.8e-29 Score=276.92 Aligned_cols=198 Identities=12% Similarity=0.143 Sum_probs=166.7
Q ss_pred ceeecC-CCCChhhHhhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccC---C
Q 008779 60 QVIYTK-YSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQ---V 135 (554)
Q Consensus 60 ~~~~~p-~~~~~~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~---~ 135 (554)
..+++| +++.|.... ..|+.+....|.+|++|+|++||+++|++|+++++|++++|+|||+.+.+...+ .
T Consensus 10 ~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~ 83 (561)
T 2i0k_A 10 TPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVE 83 (561)
T ss_dssp CCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCT
T ss_pred CceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCC
Confidence 456778 999998753 348777788999999999999999999999999999999999999976443322 2
Q ss_pred CeEEEEe-cCCCcEEEcC--CCCEEEEcCCCcHHHHHHHHHhhCCCcccCC-CCCCcccchhhhcCCCCCCc--------
Q 008779 136 PFVVIDL-INLSKISVDA--KQKTAWVQSGATLGQLYYRIADKSKNLGFPG-GVCPTVGVGGHFSGGGYGIM-------- 203 (554)
Q Consensus 136 ~gvvIdl-~~l~~i~vd~--~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~-------- 203 (554)
+|++||| ++||+|++|+ +.++|+||||+++.+|.++|.++| +.++. +..+.++|||.+++|++|..
T Consensus 84 ~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 84 KVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD--LGWANLPAPGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT--EECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC--CcccccCCCCCcccCCCcccCCcccccccCCccc
Confidence 4899999 8999999998 789999999999999999999987 55555 23366899999998888875
Q ss_pred --cccccccccceeEEEEEecCCe---eeccCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEE
Q 008779 204 --LRKFGLAADNIVDAHLIDARGR---LLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRF 268 (554)
Q Consensus 204 --~~~~G~~~d~v~~~~vV~~~G~---v~~~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~ 268 (554)
+.+||..+|+|+++|||++||+ +++...+++||+|+++|.| . ||||+++||++|.|+.....
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~~ 228 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQS 228 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEEE
Confidence 6789999999999999999999 6654445789999998654 4 89999999999998754433
No 20
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=6.1e-29 Score=267.38 Aligned_cols=179 Identities=16% Similarity=0.208 Sum_probs=151.9
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccC---CCeEEEEec-CCCcEEEcCC--CC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQ---VPFVVIDLI-NLSKISVDAK--QK 155 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~---~~gvvIdl~-~l~~i~vd~~--~~ 155 (554)
+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+..+..+ .+|++|||+ +||+|++|++ .+
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 48888889999999999999999999999999999999999999864333221 258999995 7999999985 57
Q ss_pred EEEEcCCCcHHHHHHHHHhhCCCcccCC-CCCCcccchhhhcCCCCCCc----------cccccccccceeEEEEEecCC
Q 008779 156 TAWVQSGATLGQLYYRIADKSKNLGFPG-GVCPTVGVGGHFSGGGYGIM----------LRKFGLAADNIVDAHLIDARG 224 (554)
Q Consensus 156 ~v~v~aG~~~~~l~~~l~~~g~~l~~~~-g~~~~vgigG~~~ggg~g~~----------~~~~G~~~d~v~~~~vV~~~G 224 (554)
+|+||+|+++.+|+++|.++| +.++. +.++.++|||.+++|++|.. +++||..+|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 999999999999999999987 56664 33467999999999999986 589999999999999999999
Q ss_pred e-----eeccCCCCcchHHHHhccCCCCceEEEEEEEEEEecCCeE
Q 008779 225 R-----LLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTV 265 (554)
Q Consensus 225 ~-----v~~~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~ 265 (554)
+ +++...+++|| |++|+|. |. ||||+++||++|.++..
T Consensus 179 ~~~~~~i~~~s~~~~DL-~a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 179 ASGAYALRKFARNDPQI-APLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TTTEEEEEEEETTSGGG-HHHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred CCceeeEEEeCCCChhH-HHHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 8 66544468898 5556665 56 69999999999998743
No 21
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=8.2e-28 Score=263.98 Aligned_cols=201 Identities=18% Similarity=0.167 Sum_probs=162.6
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCC-CCccccCCCeEEEEe-cCCCcE-EEcCCCCEEEEcCCC
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFE-GLSYVSQVPFVVIDL-INLSKI-SVDAKQKTAWVQSGA 163 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~-~~~~~~~~~gvvIdl-~~l~~i-~vd~~~~~v~v~aG~ 163 (554)
....|.+||+|+|++||+++|++|+++++||.++|+|||+. +...+...+|++||| ++||+| ++|+++++|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 45689999999999999999999999999999999999986 544431124899999 999999 999999999999999
Q ss_pred cHHHHHHHHHhhCCC--cccCCCCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCeeeccCC---CCc----
Q 008779 164 TLGQLYYRIADKSKN--LGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLDRKS---MGQ---- 234 (554)
Q Consensus 164 ~~~~l~~~l~~~g~~--l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~v~~~~~---~~~---- 234 (554)
++.+|.++|.++|+. +.+.++.....||||.++++|.|.. +||...|+|+++|||++||++++... .++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999854 3222334446789999999888865 99999999999999999999996321 221
Q ss_pred -----------chHHHHhcc----------CCCCceEEEEEEEEEEecCCeEEEEEEeechhhhHHHHHHHHHHHH
Q 008779 235 -----------DLFWAIRGG----------GGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQYVA 289 (554)
Q Consensus 235 -----------dl~~a~rg~----------~~g~fGiVt~~t~~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (554)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566766643 1379999999999999999987777777765445555566666554
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=3e-28 Score=265.80 Aligned_cols=195 Identities=14% Similarity=0.130 Sum_probs=164.0
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCC----CeEEEEecCCCcE-EEcCCCCEEEEcC
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQV----PFVVIDLINLSKI-SVDAKQKTAWVQS 161 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~----~gvvIdl~~l~~i-~vd~~~~~v~v~a 161 (554)
....|.+|++|+|++||+++|++|+++++||.++|||||+.+.+.+.+. ++++|||++||+| ++|+ .++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3568999999999999999999999999999999999999887766532 3899999999999 8994 57999999
Q ss_pred CCcHHHHHHHHHhhCCCcccCC---CCCCcccchhhhcCCCCCCcccccccccc----------------ceeEEEEEec
Q 008779 162 GATLGQLYYRIADKSKNLGFPG---GVCPTVGVGGHFSGGGYGIMLRKFGLAAD----------------NIVDAHLIDA 222 (554)
Q Consensus 162 G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgigG~~~ggg~g~~~~~~G~~~d----------------~v~~~~vV~~ 222 (554)
|+++.+|.++|.++| +.+|. +.|...+|||.++++++|..+.+||...| +|++++||++
T Consensus 121 Gv~l~~L~~~l~~~G--l~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLG--REPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGT--EECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcC--ccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 999999999999997 45543 34456789999999999999999999999 9999999999
Q ss_pred CCeeecc------------------CCCCc-----------------chHHHH--hccCCCCceEEEEEEEEEEecCCeE
Q 008779 223 RGRLLDR------------------KSMGQ-----------------DLFWAI--RGGGGTSFGVVVAWKLRLVTVPSTV 265 (554)
Q Consensus 223 ~G~v~~~------------------~~~~~-----------------dl~~a~--rg~~~g~fGiVt~~t~~l~p~p~~~ 265 (554)
+|++++. ...++ ||+|++ +|+. |+||| |+++||++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 9998851 12233 988888 9998 89999 99999999999877
Q ss_pred EEEEEeechhhhHHHHHHHHH
Q 008779 266 TRFRITRTLEQNATKIVHKWQ 286 (554)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~ 286 (554)
..+.+.++..+++.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 677776654444445454444
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=4.7e-25 Score=224.55 Aligned_cols=164 Identities=18% Similarity=0.171 Sum_probs=135.2
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHH
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLG 166 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~ 166 (554)
....|.++++|+|++||+++|++|+++++|+.++|+|||+...+.+. +|++|||++|++|++| ..+++||||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~--~gvvI~l~~~~~I~~d--~~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGI--RGVILHLDLLQTIERN--NTQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCE--EEEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCC--CeEEEECCCCCcEEEC--CCEEEEecCcCHH
Confidence 45689999999999999999999999999999999999987544333 3899999999999986 3599999999999
Q ss_pred HHHHHHHhhCC-CcccCCCCCCcccchhhhcCCCCCCccccc-cccccceeEEEEEecCCeeeccCCCCcchHHHHhccC
Q 008779 167 QLYYRIADKSK-NLGFPGGVCPTVGVGGHFSGGGYGIMLRKF-GLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGG 244 (554)
Q Consensus 167 ~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~~~~~-G~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~ 244 (554)
+|.+++.++|+ |+.+..|.+.+ |||.+..++.| | |...|+|+++++|+++|++++... +|++|++|++.
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~~--~~~~~~yR~s~ 197 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLKR--SELKAAYRFST 197 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEEG--GGCC--CC-CT
T ss_pred HHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEech--HHcCcchhhcc
Confidence 99999999986 56677777765 55666543322 3 789999999999999999997443 58999999885
Q ss_pred CC-CceEEEEEEEEEEecCC
Q 008779 245 GT-SFGVVVAWKLRLVTVPS 263 (554)
Q Consensus 245 ~g-~fGiVt~~t~~l~p~p~ 263 (554)
.+ ++||||+++||++|.|+
T Consensus 198 ~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 198 IAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTGGGCEEEEEEEECEECCH
T ss_pred cCCCCEEEEEEEEEEEeCCH
Confidence 43 57999999999999874
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=2.4e-24 Score=220.56 Aligned_cols=160 Identities=21% Similarity=0.228 Sum_probs=135.1
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHH
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLG 166 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~ 166 (554)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++|++|++|. ++++||||+++.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id~--~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVSD--DAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEET--TEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEcC--CEEEEeCCCcHH
Confidence 456899999999999999999999999999999999999876554433 8999999999999973 699999999999
Q ss_pred HHHHHHHhhCC-CcccCCCCCCcccchhhhcCCCCCCcccccc-ccccceeEEEEEecCCeeeccCCCCcchHHHHhccC
Q 008779 167 QLYYRIADKSK-NLGFPGGVCPTVGVGGHFSGGGYGIMLRKFG-LAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGG 244 (554)
Q Consensus 167 ~l~~~l~~~g~-~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~ 244 (554)
+|.+++.++|+ ++.+..+... +|||.+.+++.| || .+.|+|+++++|+++|++++... .|++|++|.+.
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999985 4445555443 588888776554 78 89999999999999999987443 38899999742
Q ss_pred ---CCCceEEEEEEEEEEec
Q 008779 245 ---GTSFGVVVAWKLRLVTV 261 (554)
Q Consensus 245 ---~g~fGiVt~~t~~l~p~ 261 (554)
.| ||||+++||++|.
T Consensus 192 l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTT--CEEEEEEEECEEC
T ss_pred cCCCC--EEEEEEEEEEEcC
Confidence 13 9999999999997
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=3.1e-24 Score=220.71 Aligned_cols=166 Identities=11% Similarity=0.046 Sum_probs=141.9
Q ss_pred CCCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcEEEcC--CCCEEEEcCCC
Q 008779 86 PNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDA--KQKTAWVQSGA 163 (554)
Q Consensus 86 ~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~--~~~~v~v~aG~ 163 (554)
+....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+. .+ |+||+++ |++|++++ +..+++|+||+
T Consensus 26 ~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~ 101 (357)
T 3i99_A 26 GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGE 101 (357)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTS
T ss_pred CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCC
Confidence 3456889999999999999999999999999999999999876554 43 8999998 99998853 45689999999
Q ss_pred cHHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCCCccccccc-cccceeEEEEEec-CCeeeccCCCCcchHHHHh
Q 008779 164 TLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGL-AADNIVDAHLIDA-RGRLLDRKSMGQDLFWAIR 241 (554)
Q Consensus 164 ~~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~v~~~~~~~~dl~~a~r 241 (554)
+|.+|.+++.++|+ .|.+...||+|. .||+.+++.+.||. +.|+|+++++|++ +|++++.. +.|++|+||
T Consensus 102 ~~~~l~~~a~~~Gl-----~GlE~l~gIPGt-VGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR 173 (357)
T 3i99_A 102 DWPSLVSWCVEQGI-----GGLENLALIPGC-AGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYR 173 (357)
T ss_dssp BHHHHHHHHHHTTC-----TTCGGGTTCCSB-GGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTT
T ss_pred cHHHHHHHHHHcCC-----cCccccCCCCch-hHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCcccc
Confidence 99999999999984 356666677764 46788888999997 8899999999999 99999754 359999999
Q ss_pred ccCC----CCceEEEEEEEEEEecCC
Q 008779 242 GGGG----TSFGVVVAWKLRLVTVPS 263 (554)
Q Consensus 242 g~~~----g~fGiVt~~t~~l~p~p~ 263 (554)
++.. +++||||+++||++|.++
T Consensus 174 ~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 174 DSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9863 379999999999999764
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.89 E-value=8.4e-23 Score=209.46 Aligned_cols=165 Identities=16% Similarity=0.079 Sum_probs=139.7
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcEE-EcCCC-CEEEEcCCCc
Q 008779 87 NTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKIS-VDAKQ-KTAWVQSGAT 164 (554)
Q Consensus 87 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~-vd~~~-~~v~v~aG~~ 164 (554)
....|.++++|+|++||+++|++|+++++|+.++|||||+...+. .+ |+||+|+ |++|. ++.+. .+++|+||++
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 345799999999999999999999999999999999999876543 33 8999996 99984 66666 6999999999
Q ss_pred HHHHHHHHHhhCCCcccCCCCCCcccchhhhcCCCCCCccccccc-cccceeEEEEEec-CCeeeccCCCCcchHHHHhc
Q 008779 165 LGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGL-AADNIVDAHLIDA-RGRLLDRKSMGQDLFWAIRG 242 (554)
Q Consensus 165 ~~~l~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vV~~-~G~v~~~~~~~~dl~~a~rg 242 (554)
|.+|.+++.++|+ .|.+...||+| ..||+..++.+.||. ++|+|+++++|++ +|++++... .|++|++|.
T Consensus 87 ~~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~--~d~~~gYR~ 158 (340)
T 1uxy_A 87 WHRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTA--KECRFGYRD 158 (340)
T ss_dssp HHHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET--GGGTCBTTB
T ss_pred HHHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeH--HHhccccCc
Confidence 9999999999884 45566667776 446888888999995 8899999999996 999987543 599999998
Q ss_pred cCC----CCceEEEEEEEEEEecCC
Q 008779 243 GGG----TSFGVVVAWKLRLVTVPS 263 (554)
Q Consensus 243 ~~~----g~fGiVt~~t~~l~p~p~ 263 (554)
+.. +++||||+++||+.|.+.
T Consensus 159 s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 159 SIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CccCCcCCCCEEEEEEEEEEEcCCC
Confidence 752 258999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.85 E-value=5e-22 Score=196.82 Aligned_cols=152 Identities=18% Similarity=0.161 Sum_probs=126.4
Q ss_pred CCceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCcEEEcCCCCEEEEcCCCcHHHH
Q 008779 89 PKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQL 168 (554)
Q Consensus 89 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l 168 (554)
..|. +++|+|++||+++| ++|+.++|+|||+.+.+.+.+ +|+||+|++|++|++|. +|+||++|.+|
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd~-----~v~aG~~~~~l 87 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLKG-----WVGAGTLLPLL 87 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTTS-----EEETTSBHHHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEcC-----EEECCCCHHHH
Confidence 3456 99999999999999 999999999999876554332 38999999999998762 99999999999
Q ss_pred HHHHHhhCCCcccCCCCCCcccchhhhcCCCCCCcccccc-ccccceeEEEEEecCCeeeccCCCCcchHHHHhccCCCC
Q 008779 169 YYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFG-LAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTS 247 (554)
Q Consensus 169 ~~~l~~~g~~l~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vV~~~G~v~~~~~~~~dl~~a~rg~~~g~ 247 (554)
.+++.++|+ .|.++..+|+| ..||+..++.+.|| .+.|+|+++++| ++|++++... .|++|+||++....
T Consensus 88 ~~~~~~~Gl-----~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~~~YR~s~~~~ 158 (268)
T 2gqt_A 88 VQEAARAGL-----SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELGFGYRKSHLPP 158 (268)
T ss_dssp HHHHHHTTE-----ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSCCBTTBCCCST
T ss_pred HHHHHHcCC-----cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcccccCCCCcCC
Confidence 999999973 35566667776 45677788888999 689999999999 9999997543 58999999886321
Q ss_pred ceEEEEEEEEEEecC
Q 008779 248 FGVVVAWKLRLVTVP 262 (554)
Q Consensus 248 fGiVt~~t~~l~p~p 262 (554)
-||||+++||++|.+
T Consensus 159 ~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 159 GGIVTRVRLKLKERP 173 (268)
T ss_dssp TCEEEEEEECCEECC
T ss_pred CceEEEEEEEEEeCC
Confidence 259999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.78 E-value=6.6e-19 Score=169.55 Aligned_cols=116 Identities=23% Similarity=0.237 Sum_probs=99.8
Q ss_pred EEEcCCCCEEEEcCCCcHHHHHHHHHhhCCCcccCC--CCCCcccchhhhcCCCCCCccccccccccceeEEEEEecCCe
Q 008779 148 ISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPG--GVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGR 225 (554)
Q Consensus 148 i~vd~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~--g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vV~~~G~ 225 (554)
|++|+++++|+||+|+++.+|+++|.++| +.++. |.++. +|||++++|++| .+||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 47899999999999999999999999987 55555 44555 999999999999 899999 99999999999999
Q ss_pred eec-cC-----CCCcchHHHHhccCCCCceEEEEEEEEEEecCCeEEEEEEe
Q 008779 226 LLD-RK-----SMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRIT 271 (554)
Q Consensus 226 v~~-~~-----~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p~~~~~~~~~ 271 (554)
+++ .. ..++||||+++|++ |+|||||+++||++|.|+....+.+.
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 986 21 24589999999997 89999999999999999866555443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.29 E-value=1.3e-06 Score=87.29 Aligned_cols=156 Identities=17% Similarity=0.121 Sum_probs=102.8
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCC-ccccCCCeEEEEecC---CCcEEEcCCCCEEEEcCCCcH
Q 008779 90 KPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGL-SYVSQVPFVVIDLIN---LSKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 90 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~-~~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~ 165 (554)
.|-.++.|+|.+|+.++++. ++.+.++.|||++.... .......+++||+++ |+.|+++ +..+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45578999999999999875 34689999999995431 111112379999984 6778774 447999999999
Q ss_pred HHHHHH-HHhhCC-Cccc----CCCCC--CcccchhhhcCCCCCCcccccccccccee-------EEEEEecCCeeeccC
Q 008779 166 GQLYYR-IADKSK-NLGF----PGGVC--PTVGVGGHFSGGGYGIMLRKFGLAADNIV-------DAHLIDARGRLLDRK 230 (554)
Q Consensus 166 ~~l~~~-l~~~g~-~l~~----~~g~~--~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~v~~~~ 230 (554)
.+|.+. +.+++. +|.. ..|.- +..+|||.+..+.- ..|.+. .+++..++|. .+.+
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-RTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-EEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-EEEE
Confidence 999962 333332 2221 22221 24678999987632 345443 5888889983 3322
Q ss_pred CCCcchHHHHhccCCCCceEEEEEEEEEEecC
Q 008779 231 SMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVP 262 (554)
Q Consensus 231 ~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~p 262 (554)
. .|+|+.+|-..-..-.|||+++|.+.+..
T Consensus 149 ~--~df~~g~~~t~l~~~eii~~i~ip~~~~~ 178 (287)
T 1ffv_C 149 A--DGFFLGTYMTLLEENEVMVEIRVPAFAQG 178 (287)
T ss_dssp S--TTTEEETTEESCCTTCEEEEEEEECCCTT
T ss_pred H--HHHhcCcccccCCCCCEEEEEEecCCCCC
Confidence 2 48888876432223369999999877643
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.75 E-value=4.5e-05 Score=76.18 Aligned_cols=155 Identities=15% Similarity=0.101 Sum_probs=96.4
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCC-ccccCCCeEEEEecC---CCcEEEcCCCCEEEEcCCCcH
Q 008779 90 KPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGL-SYVSQVPFVVIDLIN---LSKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 90 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~-~~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~ 165 (554)
.+-.++.|+|.+|+.++++.. +-+.++.+|||+.... ........++||+++ |+.|+.+ ++.+++|+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 455689999999999988643 4568999999995321 111112369999986 5667664 457999999999
Q ss_pred HHHHH--HHHhhCCCccc----CCCC--CCcccchhhhcCCCCCCcccccccccccee-------EEEEEecCCeeeccC
Q 008779 166 GQLYY--RIADKSKNLGF----PGGV--CPTVGVGGHFSGGGYGIMLRKFGLAADNIV-------DAHLIDARGRLLDRK 230 (554)
Q Consensus 166 ~~l~~--~l~~~g~~l~~----~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~v~~~~ 230 (554)
.+|.+ .+.++-..|.- ..+. -+..+|||.+..+. ...|.+. .+++..++|+... +
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~r~v-~ 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGARIV-A 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEEEEE-E
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCccEEE-E
Confidence 99994 45442111211 1111 12358899998762 2345543 6667778884322 1
Q ss_pred CCCcchHHHHhccCCCCceEEEEEEEEEEec
Q 008779 231 SMGQDLFWAIRGGGGTSFGVVVAWKLRLVTV 261 (554)
Q Consensus 231 ~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p~ 261 (554)
- .|+|..++-..-..-.|||++.|...+.
T Consensus 149 ~--~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 149 A--RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred H--HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 1 3666555421112336999999976653
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.46 E-value=0.00011 Score=77.99 Aligned_cols=152 Identities=15% Similarity=0.082 Sum_probs=100.0
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCc-cccCCCeEEEEecC---CCcEEEcCCCCEEEEcCCCcHHHH
Q 008779 93 VIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLS-YVSQVPFVVIDLIN---LSKISVDAKQKTAWVQSGATLGQL 168 (554)
Q Consensus 93 ~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~-~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~~~l 168 (554)
.++.|+|.+|+.++++.. -+.++.+||++....- ......+++||+++ |+.|+.+ +..+++|+|+++.+|
T Consensus 179 ~y~~P~sl~ea~~ll~~~----~~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH----PEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC----TTCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHhhC----CCCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 467899999999998753 2688999999975420 11112368999988 6778775 446999999999999
Q ss_pred HHHHHhhCC-Cc----ccCCCCC--CcccchhhhcCCCCCCcccccccccccee----EEEEEecCCeeeccCCCCcchH
Q 008779 169 YYRIADKSK-NL----GFPGGVC--PTVGVGGHFSGGGYGIMLRKFGLAADNIV----DAHLIDARGRLLDRKSMGQDLF 237 (554)
Q Consensus 169 ~~~l~~~g~-~l----~~~~g~~--~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G~v~~~~~~~~dl~ 237 (554)
.+.+.+ .. .| ....+.- +..+|||.+..+.++ +-...-++ .+++..++|+ .+.+- .|+|
T Consensus 253 ~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp~--~dF~ 322 (462)
T 2w3s_A 253 RAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMPL--EDFF 322 (462)
T ss_dssp HHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCBG--GGGE
T ss_pred HHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEEH--HHhh
Confidence 987433 22 11 1122221 346889999887633 44445566 7788888883 22222 4777
Q ss_pred HHHhccCCCCceEEEEEEEEEEe
Q 008779 238 WAIRGGGGTSFGVVVAWKLRLVT 260 (554)
Q Consensus 238 ~a~rg~~~g~fGiVt~~t~~l~p 260 (554)
..+|-..-..-.||+++.|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 77653221223699999987655
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.74 E-value=0.0018 Score=64.38 Aligned_cols=153 Identities=16% Similarity=0.074 Sum_probs=91.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCc-cccCCCeEEEEecC---CCcEEEcCCCCEEEEcCCCcH
Q 008779 90 KPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLS-YVSQVPFVVIDLIN---LSKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 90 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~-~~~~~~gvvIdl~~---l~~i~vd~~~~~v~v~aG~~~ 165 (554)
.|-.++.|+|.+|+.++++. +-..++.+|||+....- ........+||+++ |+.|+.+ ++.+++|+++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 77 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQS--AGILSVGAMVTH 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEE--TTEEEEETTCBH
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEc--CCEEEEcCCCcH
Confidence 45568999999999998863 33478899999943210 01111258999998 4566654 557999999999
Q ss_pred HHHHH--HHHhhCCCcc--cCC-CC---CCcccchhhhcCCCCCCcccccccccccee-------EEEEEecCCeeeccC
Q 008779 166 GQLYY--RIADKSKNLG--FPG-GV---CPTVGVGGHFSGGGYGIMLRKFGLAADNIV-------DAHLIDARGRLLDRK 230 (554)
Q Consensus 166 ~~l~~--~l~~~g~~l~--~~~-g~---~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vV~~~G~v~~~~ 230 (554)
.+|.+ .+.++-..|. +.. |. -+..+|||.+..+-. ..|... .+++..++|+....-
T Consensus 78 ~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p---------~sD~~~~L~Al~A~v~l~~~~g~R~vp~ 148 (288)
T 1t3q_C 78 FRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA---------GAEMPFLMATLGATMYIASSAGVRSVSA 148 (288)
T ss_dssp HHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEEEEEH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC---------cHHHHHHHHHcCcEEEEEcCCceEEEEH
Confidence 99986 3433211111 001 11 144588999975521 346554 667777787533211
Q ss_pred CCCcchHHHHhccCCCCceEEEEEEEEEEe
Q 008779 231 SMGQDLFWAIRGGGGTSFGVVVAWKLRLVT 260 (554)
Q Consensus 231 ~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p 260 (554)
.|+|...+-..-..-.|||++.|...+
T Consensus 149 ---~dF~~g~~~t~L~~~Eil~~I~iP~~~ 175 (288)
T 1t3q_C 149 ---TDFMKGHYFTDLEAGEVLVRVEIPIPA 175 (288)
T ss_dssp ---HHHEEETTEESCCTTCEEEEEEEECCS
T ss_pred ---HHHhcCcccccCCCCCEEEEEEecCCC
Confidence 255544321111223689999886543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.68 E-value=0.0028 Score=63.63 Aligned_cols=157 Identities=8% Similarity=0.025 Sum_probs=91.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCc-cccCCCeEEEEecCC---CcEEEcCCCCEEEEcCCCcH
Q 008779 90 KPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLS-YVSQVPFVVIDLINL---SKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 90 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~-~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~ 165 (554)
.+...+.|+|.+|+.++++.. . ..++.+||++....- ........+||++++ +.|+.+ ++.+++|+++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~~---~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQH---P-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHHC---T-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHhC---C-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEEC--CCeEEEccCCcH
Confidence 556789999999999887542 2 368889999964211 011123689999974 556654 568999999999
Q ss_pred HHHHHHHHhh-------------CCC--cccCCCC--CCcccchhhhcCCCCCCcccccccccccee----EEEEEecCC
Q 008779 166 GQLYYRIADK-------------SKN--LGFPGGV--CPTVGVGGHFSGGGYGIMLRKFGLAADNIV----DAHLIDARG 224 (554)
Q Consensus 166 ~~l~~~l~~~-------------g~~--l~~~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vV~~~G 224 (554)
.+|.+.+.++ ... +....+. -+..+|||.+..+... +-..--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEEcCCC
Confidence 9999876532 000 0111111 1356889999776431 11111222 466777788
Q ss_pred eeeccCCCCcchHHHHhccCCCCceEEEEEEEEEEe
Q 008779 225 RLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVT 260 (554)
Q Consensus 225 ~v~~~~~~~~dl~~a~rg~~~g~fGiVt~~t~~l~p 260 (554)
+....- ..|+|-+++--.-..--|||++.+...+
T Consensus 157 ~R~vp~--~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 157 RRTVPM--DHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp EEEEEC--CGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred cEEEEe--ehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 532211 1155544431111122599999886543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.26 E-value=0.086 Score=52.41 Aligned_cols=75 Identities=20% Similarity=0.184 Sum_probs=53.1
Q ss_pred ceEEEecCCHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCC-ccccCCCeEEEEecCC---CcEEEcCCCCEEEEcCCCcH
Q 008779 91 PQVIITPLDVSQVQAAIKCSKKHGF-QIRVRSGGHDFEGL-SYVSQVPFVVIDLINL---SKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 91 p~~vv~P~s~~dv~~~v~~a~~~~~-~v~v~ggGhs~~~~-~~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~ 165 (554)
|-.++.|+|.+|..++++. ++- ..++.+||++.... -........+||++++ +.|+. +++.+++|+++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~---~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQ---YKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHHH---TTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHHh---CCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 4568899999999887643 332 47888999996321 1111123689999986 45655 4568999999999
Q ss_pred HHHHH
Q 008779 166 GQLYY 170 (554)
Q Consensus 166 ~~l~~ 170 (554)
.+|.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=88.95 E-value=0.28 Score=49.30 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=54.2
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCC-ccccCCCeEEEEecCC---CcEEEcCCCCEEEEcCCCcH
Q 008779 90 KPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGL-SYVSQVPFVVIDLINL---SKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 90 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~-~~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~ 165 (554)
.|-.++.|+|.+|..++++. -.-.+.+||+++... -........+||++++ +.|+.+++ +.+++|+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD-GSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTT-SCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCC-CeEEEccCCcH
Confidence 44568899999999988762 257889999996321 1111123689999876 66766433 36999999999
Q ss_pred HHHHHH
Q 008779 166 GQLYYR 171 (554)
Q Consensus 166 ~~l~~~ 171 (554)
.+|.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999863
No 36
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=87.29 E-value=0.5 Score=50.69 Aligned_cols=36 Identities=22% Similarity=0.138 Sum_probs=26.4
Q ss_pred hhhhhhhcc-HHHHHHhhhhcCCCCCCCCCCCCCccc
Q 008779 510 WGNKYFKNN-FKRLVHVKTMVDPHNFFRNEQSIPPLT 545 (554)
Q Consensus 510 yg~~Yfg~n-~~RL~~iK~kyDP~nvF~~~qsI~~~~ 545 (554)
|...+||++ ++=+++||+.+||+|+|+--.-+..+.
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~~~~ 517 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGIDLN 517 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGCCTT
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCCCcc
Confidence 446677765 555699999999999998766555443
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=75.40 E-value=2.1 Score=51.05 Aligned_cols=78 Identities=6% Similarity=0.008 Sum_probs=55.0
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCc-cccCCCeEEEEecCC---CcEEEcCCCCEEEEcCCCcH
Q 008779 90 KPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLS-YVSQVPFVVIDLINL---SKISVDAKQKTAWVQSGATL 165 (554)
Q Consensus 90 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~-~~~~~~gvvIdl~~l---~~i~vd~~~~~v~v~aG~~~ 165 (554)
.+...++|+|.+|+.++++.. -.-++.+||++....- ........+||++++ +.|+.+ ...+++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~----~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH----PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC----TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhhC----CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 456789999999998877542 2357889999853211 111113589999985 556654 557999999999
Q ss_pred HHHHHHHH
Q 008779 166 GQLYYRIA 173 (554)
Q Consensus 166 ~~l~~~l~ 173 (554)
.+|.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 38
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=74.09 E-value=5 Score=44.21 Aligned_cols=29 Identities=38% Similarity=0.575 Sum_probs=23.3
Q ss_pred hhhhhhhh-ccHHHHHHhhhhcCCCCCCCC
Q 008779 509 IWGNKYFK-NNFKRLVHVKTMVDPHNFFRN 537 (554)
Q Consensus 509 ~yg~~Yfg-~n~~RL~~iK~kyDP~nvF~~ 537 (554)
.|-..+|| ..++.|++||+.|||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 34455565 579999999999999999974
No 39
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=54.28 E-value=24 Score=37.10 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=23.6
Q ss_pred hhhhhhhh-ccHHHHHHhhhhcCCCCCCCC
Q 008779 509 IWGNKYFK-NNFKRLVHVKTMVDPHNFFRN 537 (554)
Q Consensus 509 ~yg~~Yfg-~n~~RL~~iK~kyDP~nvF~~ 537 (554)
.|-...|| +.++-+++||+.+||+|+++-
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilNP 472 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMNP 472 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBST
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 45555665 579999999999999999974
No 40
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=53.09 E-value=14 Score=39.67 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=25.1
Q ss_pred ccHHHHHHhhhhcCCCCCCCCCCCCCccccCCc
Q 008779 517 NNFKRLVHVKTMVDPHNFFRNEQSIPPLTSWRK 549 (554)
Q Consensus 517 ~n~~RL~~iK~kyDP~nvF~~~qsI~~~~~~~~ 549 (554)
..++-+++||+.+||+|+|+--.-+.-+..+|+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~~~~~~~~ 555 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGVWPSQYSH 555 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGCCCTTSCH
T ss_pred HHHHHHHHHHHHcCccCCCCCCccccCcccccc
Confidence 468889999999999999987766543345543
No 41
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=52.18 E-value=7.3 Score=42.10 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=24.0
Q ss_pred hccHHHHHHhhhhcCCCCCCCCCCCCCc-cccCC
Q 008779 516 KNNFKRLVHVKTMVDPHNFFRNEQSIPP-LTSWR 548 (554)
Q Consensus 516 g~n~~RL~~iK~kyDP~nvF~~~qsI~~-~~~~~ 548 (554)
++..+ |++||+.+||+|+|+--.-+.| ...|.
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~~~ 568 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTSKRKNWQ 568 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCCCSSCC-
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCCcccccc
Confidence 33444 9999999999999998877765 44454
No 42
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=42.07 E-value=10 Score=40.75 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=20.6
Q ss_pred ccHHHHHHhhhhcCCCCCCCCC
Q 008779 517 NNFKRLVHVKTMVDPHNFFRNE 538 (554)
Q Consensus 517 ~n~~RL~~iK~kyDP~nvF~~~ 538 (554)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 7999999999999999999875
No 43
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=39.24 E-value=39 Score=36.45 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=19.2
Q ss_pred ccHHHHHHhhhhcCCCCCCCCC
Q 008779 517 NNFKRLVHVKTMVDPHNFFRNE 538 (554)
Q Consensus 517 ~n~~RL~~iK~kyDP~nvF~~~ 538 (554)
..++=+++||+.+||+|+|+-.
T Consensus 560 ~~~~lmr~iK~a~DP~gIlNPG 581 (584)
T 2uuu_A 560 GWINVYRSLKETIDPKDICNPR 581 (584)
T ss_dssp THHHHHHHHHHHHCTTCCBSCC
T ss_pred HHHHHHHHHHHHcCCCcCCCCC
Confidence 4689999999999999999753
No 44
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=37.30 E-value=27 Score=41.66 Aligned_cols=78 Identities=12% Similarity=0.109 Sum_probs=49.3
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCC-ccccCCCeEEEEecCCCcE-EEcCCCCEEEEcCCCcHHHHHH
Q 008779 93 VIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGL-SYVSQVPFVVIDLINLSKI-SVDAKQKTAWVQSGATLGQLYY 170 (554)
Q Consensus 93 ~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~-~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l~~ 170 (554)
..+.|.|.+|+.++...-- + .++..|++...-. -.....-.++|++.+...+ .|..+...+++|+++++.++.+
T Consensus 242 ~w~~P~tl~el~~l~~~~p--~--a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~~ 317 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKHP--S--APLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKN 317 (1335)
T ss_dssp EEEECSSHHHHHHHHHHCT--T--SCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHHH
T ss_pred eEecCCCHHHHHHHHHHCC--C--CeEEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHHH
Confidence 4689999999988754321 2 2345566653210 0001112588998875443 3444566799999999999988
Q ss_pred HHHh
Q 008779 171 RIAD 174 (554)
Q Consensus 171 ~l~~ 174 (554)
.|.+
T Consensus 318 ~l~~ 321 (1335)
T 3zyv_A 318 VLSD 321 (1335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=36.37 E-value=34 Score=28.64 Aligned_cols=42 Identities=10% Similarity=0.283 Sum_probs=34.6
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcE-EEEeCCCC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQI-RVRSGGHD 125 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGhs 125 (554)
+|.. ...|..|+.+.+++|+.++.+.|++.|+|. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4743 568999999999999999999999999997 45556663
No 46
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=32.48 E-value=16 Score=39.01 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=21.0
Q ss_pred hccHHHHHHhhhhcCCCCCCCCC
Q 008779 516 KNNFKRLVHVKTMVDPHNFFRNE 538 (554)
Q Consensus 516 g~n~~RL~~iK~kyDP~nvF~~~ 538 (554)
|+|++.-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 47
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=31.19 E-value=56 Score=27.49 Aligned_cols=42 Identities=10% Similarity=0.205 Sum_probs=34.2
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcE-EEEeCCCC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQI-RVRSGGHD 125 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGhs 125 (554)
+|.. ...+..|+.+.+++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 3743 448999999999999999999999999996 45556664
No 48
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=30.80 E-value=83 Score=26.26 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=34.4
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcE-EEEeCCCC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQI-RVRSGGHD 125 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGhs 125 (554)
+|.. ...|..|+...+++|+.++.+.|++.|+|. .++-.|+.
T Consensus 49 ~W~~--~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWFR--EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 3643 568999999999999999999999999997 45556663
No 49
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=30.07 E-value=82 Score=26.00 Aligned_cols=41 Identities=12% Similarity=0.285 Sum_probs=32.7
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcE-EEEeCCC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQI-RVRSGGH 124 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 124 (554)
+|. ....|..|+...+++|+.++.+.|++.|+|. .++-.|+
T Consensus 43 ~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 43 EWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 364 3568999999999999999999999999986 4444554
No 50
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=29.19 E-value=85 Score=25.99 Aligned_cols=42 Identities=10% Similarity=0.233 Sum_probs=34.3
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcE-EEEeCCCC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQI-RVRSGGHD 125 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGhs 125 (554)
+|. ....|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 364 3568999999999999999999999999997 44555654
No 51
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=28.93 E-value=30 Score=27.08 Aligned_cols=17 Identities=29% Similarity=0.571 Sum_probs=14.3
Q ss_pred hhh-hccHHHHHHhhhhc
Q 008779 513 KYF-KNNFKRLVHVKTMV 529 (554)
Q Consensus 513 ~Yf-g~n~~RL~~iK~ky 529 (554)
++| .+|++||.++|+++
T Consensus 22 K~FT~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 22 KFFTQSNLEKLPKYKEKK 39 (84)
T ss_dssp GGCCHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHh
Confidence 355 68999999999887
No 52
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=26.08 E-value=69 Score=26.57 Aligned_cols=41 Identities=17% Similarity=0.392 Sum_probs=33.3
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCcE-EEEeCCC
Q 008779 82 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQI-RVRSGGH 124 (554)
Q Consensus 82 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v-~v~ggGh 124 (554)
+|.. ...|..++...+++++.++.+.|++.|+|. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3754 446999999999999999999999999995 4555565
No 53
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=24.91 E-value=1.2e+02 Score=26.55 Aligned_cols=42 Identities=19% Similarity=0.322 Sum_probs=35.0
Q ss_pred eEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCcccc
Q 008779 92 QVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVS 133 (554)
Q Consensus 92 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~ 133 (554)
...+.|.+.+++.++++.+.+.+.-+.+..||.+....+...
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~t~ 88 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQTP 88 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHH
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcChH
Confidence 357889999999999999988668899999999987655543
No 54
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=23.22 E-value=66 Score=25.30 Aligned_cols=34 Identities=21% Similarity=0.126 Sum_probs=27.9
Q ss_pred eEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccccCCCeEEEEecCCCc
Q 008779 92 QVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSK 147 (554)
Q Consensus 92 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~~~~~gvvIdl~~l~~ 147 (554)
-.++.|++-+|+++++...++.+ .|+|+|.+|+.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 47899999999999999987722 58899888763
No 55
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.71 E-value=1.5e+02 Score=26.05 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=34.1
Q ss_pred eEEEecCCHHHHHHHHHHHHHc-CCcEEEEeCCCCCCCCccc
Q 008779 92 QVIITPLDVSQVQAAIKCSKKH-GFQIRVRSGGHDFEGLSYV 132 (554)
Q Consensus 92 ~~vv~P~s~~dv~~~v~~a~~~-~~~v~v~ggGhs~~~~~~~ 132 (554)
...+.|.+.+++.++++.+.+. +.-+.+..||.+....+..
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t 87 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQA 87 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCH
Confidence 3578899999999999999886 6889999999997665443
No 56
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.95 E-value=1.6e+02 Score=26.41 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=33.7
Q ss_pred eEEEecCCHHHHHHHHHHHHHcCCcEEEEeCCCCCCCCccc
Q 008779 92 QVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYV 132 (554)
Q Consensus 92 ~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGhs~~~~~~~ 132 (554)
...+.|.+.+++.++++.+.+.+.-+.+..||.|....+..
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~t 107 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDVT 107 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCH
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCcccH
Confidence 35678999999999999887667889999999998665543
No 57
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=20.42 E-value=1.7e+02 Score=25.47 Aligned_cols=41 Identities=12% Similarity=0.272 Sum_probs=33.8
Q ss_pred eEEEecCCHHHHHHHHHHHHH-cCCcEEEEeCCCCCCCCccc
Q 008779 92 QVIITPLDVSQVQAAIKCSKK-HGFQIRVRSGGHDFEGLSYV 132 (554)
Q Consensus 92 ~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGhs~~~~~~~ 132 (554)
...+.|.+.+++.++++.+.+ .+.-+.+.+||.+....+..
T Consensus 48 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t 89 (167)
T 1uuy_A 48 ATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVT 89 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCH
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCch
Confidence 356889999999999999876 57889999999998665543
Done!