Citrus Sinensis ID: 008779

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550----
MKSPCSSVIPLVFLLLLSYNSWVSYANVHATSSKPADHHDENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQYVANNLHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELGLKKGDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPLTSWRKKNDGD
cccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccccccccccccEEccccccHHHHHHHccccccccccccccccEEEECccHHHHHHHHHHHHHcccEEEEEcccccccccccccccccEEEEccccccEEEcccccEEEEcccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHcccccEEEEEEEEEEEcccEEEccccccccEEEEEccccccEEEEEEEEEEEEcccccEEEEEEEccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccEEEEEEEECccHHHHHHHHHHccccccccccccccccHHHHHHHHccccccccHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccEEEEEEEEEcccccccHHHHHHHHHHHHHcccccccccccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
******SVIPLVFLLLLSYNSWVSYANVHATS*********NLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQYVANNLHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELGLKKGDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSI*************
xxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKSPCSSVIPLVFLLLLSYNSWVSYANVHATSSKPADHHDENLFLDCLSMHPDNSSSISQVIYTKYSPSYSSVLSSSAQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKHGFQIRVRSGGHDFEGLSYVSQVPFVVIDLINLSKISVDAKQKTAWVQSGATLGQLYYRIADKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDARGRLLDRKSMGQDLFWAIRGGGGTSFGVVVAWKLRLVTVPSTVTRFRITRTLEQNATKIVHKWQYVANNLHEDLVIEVGLIKMNSSMVAVFSSLFLGGVDRLLPLMQESFPELGLKKGDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKVDYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWRGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGTNNQGYTSIEQASIWGNKYFKNNFKRLVHVKTMVDPHNFFRNEQSIPPLTSWRKKNDGD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Tetrahydrocannabinolic acid synthase Catalyzes the oxidative cyclization of the monoterpene moiety in cannabigerolic acid (CBGA), producing delta(9)-tetrahydrocannabinolate (THCA), the major cannabioid in drug-type Cannabis plants. Can also use cannabinerolic acid as substrate, but not cannabigerol or cannabinerol.probableQ8GTB6
Cannabidiolic acid synthase Catalyzes the stereoselective oxidative cyclization of the monoterpene moiety in cannabigerolic acid (CBGA), producing cannabidiolate (CBDA), the major cannabioid in fiber-type Cannabis plants. Can also use cannabinerolic acid as substrate, but not cannabigerol or cannabinerol.probableA6P6V9
Inactive tetrahydrocannabinolic acid synthase Inactive enzyme unable to catalyze the production of delta(9)-tetrahydrocannabinolate (THCA), the precursor of Delta(1)-tetrahydrocannabinol.probableQ33DQ2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VTE, chain A
Confidence level:very confident
Coverage over the Query: 40-547
View the alignment between query and template
View the model in PyMOL