BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008785
(553 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 134/234 (57%), Gaps = 5/234 (2%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKK-EFYS 314
K F+ EL+ + NFS N +LG G Y G L DG+ VAVKRLK Q + +F +
Sbjct: 26 KRFSLRELQVASDNFSNKN-ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
E+ + H NL+ ++G C +R +VY ++ NG + L P LDW R ++
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
A A+G+A+LHD P ++HRD++A+N+LLDEEF A + GL+K + ++ +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLL 488
GT G++APE++ + + K+DV+ +GV+LLE L+ +R + L L + ++
Sbjct: 205 -GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE--LITGQRAFDLARLANDDDVM 255
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 5/234 (2%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKK-EFYS 314
K F+ EL+ + NF N +LG G Y G L DG VAVKRLK Q + +F +
Sbjct: 18 KRFSLRELQVASDNFXNKN-ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
E+ + H NL+ ++G C +R +VY ++ NG + L P LDW R ++
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
A A+G+A+LHD P ++HRD++A+N+LLDEEF A + GL+K + ++ +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLL 488
G G++APE++ + + K+DV+ +GV+LLE L+ +R + L L + ++
Sbjct: 197 -GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLE--LITGQRAFDLARLANDDDVM 247
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 258 FTTEELRSITKNFSE-----GNRLLGDSKTGGTYSGILPDGSRVAVKRLKR----SSFQR 308
F+ EL+++T NF E G +G+ G Y G + + + VAVK+L ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K++F EI A+ H NLV + G D D +VY ++ NG L L + G L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 132
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL---SKFVPWE 425
MR K+A A GI FLH+ H +HRDI+++N+LLDE F A + GL S+
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 426 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
VM R V GT Y+APE R E+T KSD+YSFGV+LLEI
Sbjct: 190 VMXSRIV---GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 227
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 258 FTTEELRSITKNFSE-----GNRLLGDSKTGGTYSGILPDGSRVAVKRLKR----SSFQR 308
F+ EL+++T NF E G +G+ G Y G + + + VAVK+L ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K++F EI A+ H NLV + G D D +VY ++ NG L L + G L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 126
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL---SKFVPWE 425
MR K+A A GI FLH+ H +HRDI+++N+LLDE F A + GL S+
Sbjct: 127 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 426 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
VM R V GT Y+APE R E+T KSD+YSFGV+LLEI
Sbjct: 184 VMXXRIV---GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 221
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 122/222 (54%), Gaps = 21/222 (9%)
Query: 258 FTTEELRSITKNFSE-----GNRLLGDSKTGGTYSGILPDGSRVAVKRLKR----SSFQR 308
F+ EL+++T NF E G +G+ G Y G + + + VAVK+L ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K++F EI A+ H NLV + G D D +VY ++ NG L L + G L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSW 132
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL---SKFVPWE 425
MR K+A A GI FLH+ H +HRDI+++N+LLDE F A + GL S+
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 426 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
VM R V GT Y+APE R E+T KSD+YSFGV+LLEI
Sbjct: 190 VMXXRIV---GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 227
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 246 AASALVP-PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRS 304
++S LVP S++V + L T NF + L+G G Y G+L DG++VA+KR
Sbjct: 17 SSSYLVPFESYRVPLVD-LEEATNNF-DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE 74
Query: 305 SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGR 364
S Q +EF +EI + HP+LV++ G C + + ++Y+++ NG L R L+
Sbjct: 75 SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM 134
Query: 365 SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 424
S+ W R+++ A+G+ +LH + ++HRD+++ N+LLDE F + G+SK
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 425 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHS 484
+ GT GY+ PE+ + LT KSDVYSFGV+L E VLC R + +L
Sbjct: 192 LDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE---VLCARSAIVQSLPRE 248
Query: 485 M 485
M
Sbjct: 249 M 249
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 131/241 (54%), Gaps = 9/241 (3%)
Query: 246 AASALVP-PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRS 304
++S LVP S++V + L T NF L+G G Y G+L DG++VA+KR
Sbjct: 17 SSSYLVPFESYRVPLVD-LEEATNNFDH-KFLIGHGVFGKVYKGVLRDGAKVALKRRTPE 74
Query: 305 SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGR 364
S Q +EF +EI + HP+LV++ G C + + ++Y+++ NG L R L+
Sbjct: 75 SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM 134
Query: 365 SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 424
S+ W R+++ A+G+ +LH + ++HRD+++ N+LLDE F + G+SK
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Query: 425 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHS 484
+ GT GY+ PE+ + LT KSDVYSFGV+L E VLC R + +L
Sbjct: 192 LGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE---VLCARSAIVQSLPRE 248
Query: 485 M 485
M
Sbjct: 249 M 249
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 19/221 (8%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDG----SRVAVKRLKR----SSFQRK 309
F+ EL+++T NF E +G +K G G++ G + VAVK+L ++ + K
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
++F EI A+ H NLV + G D D +VY + NG L L + G L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLSWH 124
Query: 370 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL---SKFVPWEV 426
R K+A A GI FLH+ H +HRDI+++N+LLDE F A + GL S+ V
Sbjct: 125 XRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
R V GT Y APE R E+T KSD+YSFGV+LLEI
Sbjct: 182 XXSRIV---GTTAYXAPE-ALRGEITPKSDIYSFGVVLLEI 218
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 293 GSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
GS VAVK L F +R EF E+ RL HPN+V G + IV E++ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 351 PLDRWLHHIPRGGR-SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
L R LH G R LD R+ +A +A+G+ +LH++ P +VHRD+++ N+L+D+++
Sbjct: 120 SLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKY 176
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GLS+ + + A GT ++APE + KSDVYSFGV+L E+
Sbjct: 177 TVKVCDFGLSRLKASXFLXSKX--AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 293 GSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
GS VAVK L F +R EF E+ RL HPN+V G + IV E++ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 351 PLDRWLHHIPRGGR-SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
L R LH G R LD R+ +A +A+G+ +LH++ P +VHR++++ N+L+D+++
Sbjct: 120 SLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKY 176
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GLS+ + ++ A GT ++APE + KSDVYSFGV+L E+
Sbjct: 177 TVKVCDFGLSRLKASTFLSSKS--AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 293 GSRVAVKRLKRSS----FQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
G VAVK + Q + E FA L HPN++A++G C + +V EF
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
GPL+R L G+ + + + A +A+G+ +LHD+ ++HRD+++SN+L+ ++
Sbjct: 90 GGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK 144
Query: 409 FGAHLMGVGLSKFVPWEVMQE--RT--VMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
+ + K + + +E RT + A G Y ++APE + + + SDV+S+GVLL
Sbjct: 145 VENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLL 204
Query: 465 LEI 467
E+
Sbjct: 205 WEL 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTX---TAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 193 KSDVWAFGVLLWEI 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTX---TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 193 KSDVWAFGVLLWEI 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 147
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 205 KSDVWAFGVLLWEI 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 138
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 196 KSDVWAFGVLLWEI 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTX---TAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTF---TAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VAVK +K S + EF+ E +L HP LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ NG L L+++ G+ L+ + +++ + +G+AFL +HR
Sbjct: 75 EYPIYIVTEYISNGCL---LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELTT 453
D+ A N L+D + + G++++ V+ ++ V + GT + APE + + ++
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRY----VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 454 KSDVYSFGVLLLEIRLVLCRRWWTLYT 480
KSDV++FG+L+ E+ L + + LYT
Sbjct: 185 KSDVWAFGILMWEV-FSLGKMPYDLYT 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTX---TAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + +EF E + HPNLV + G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 338
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
R++ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 396 KSDVWAFGVLLWEI 409
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + +EF E + HPNLV + G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + + + + +AT ++ + +L K + +H
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIH 341
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
R++ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 399 KSDVWAFGVLLWEI 412
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + +EF E + HPNLV + G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YI+ EF+ G L +L R + ++ + + +AT ++ + +L K + +H
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIH 380
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
R++ A N L+ E + GLS+ + + T AG + + APE + N+ +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 438 KSDVWAFGVLLWEI 451
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ EF+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 102 SLREYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 80 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE---DAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 191 SDVWSFGILLTEI 203
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L P G + L + +A +A+G+AF+ ++ + +HR
Sbjct: 81 E-PIYIITEYMENGSLVDFLK-TPSGIK-LTINKLLDMAAQIAEGMAFIEER---NYIHR 134
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 192 SDVWSFGILLTEI 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 82 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 135
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 193 SDVWSFGILLTEI 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L P G + L + +A +A+G+AF+ ++ + +HR
Sbjct: 80 E-PIYIITEYMENGSLVDFLK-TPSGIK-LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 191 SDVWSFGILLTEI 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 293 GSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVN 349
G VAVK LK Q + + EI L+H +++ KGCC D G++ +V E+V
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV-- 100
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
PL ++PR S+ A + A + +G+A+LH + H +HR++ A NVLLD +
Sbjct: 101 -PLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDR 154
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K VP R G + + APE + + SDV+SFGV L E+
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 89 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 142
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 200 SDVWSFGILLTEI 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 86 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 197 SDVWSFGILLTEI 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 80 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 191 SDVWSFGILLTEI 203
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L P G + L + +A +A+G+AF+ ++ + +HR
Sbjct: 80 E-PIYIITEYMENGSLVDFLK-TPSGIK-LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 191 SDVWSFGILLTEI 203
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 88 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 141
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIE---DNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 199 SDVWSFGILLTEI 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 277 LGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LG + G Y G+ S VAVK LK + + + EF E + HPNLV + G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
YIV E++ G L +L R + + + +AT ++ + +L K + +H
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNR--EEVTAVVLLYMATQISSAMEYLEKK---NFIH 153
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTT 453
RD+ A N L+ E + GLS+ + + T AG + + APE + N +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 454 KSDVYSFGVLLLEI 467
KSDV++FGVLL EI
Sbjct: 211 KSDVWAFGVLLWEI 224
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 85 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 196 SDVWSFGILLTEI 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L G L + +A +A+G+AF+ ++ + +HR
Sbjct: 86 E-PIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 197 SDVWSFGILLTEI 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 293 GSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVN 349
G VAVK LK Q + + EI L+H +++ KGCC D G++ +V E+V
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV-- 100
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
PL ++PR S+ A + A + +G+A+LH + H +HR++ A NVLLD +
Sbjct: 101 -PLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDR 154
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K VP R G + + APE + + SDV+SFGV L E+
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 98 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 151
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L P G + L + +A +A+G+AF+ ++ + +HR
Sbjct: 90 E-PIYIITEYMENGSLVDFLK-TPSGIK-LTINKLLDMAAQIAEGMAFIEER---NYIHR 143
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 201 SDVWSFGILLTEI 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 130 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 183
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 99 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 102 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 99 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 97 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 150
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G + G ++VAVK LK+ S F +E +L H LV +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YI+ E++ NG L +L P G + L + +A +A+G+AF+ ++ + +HR
Sbjct: 75 E-PIYIITEYMENGSLVDFLK-TPSGIK-LTINKLLDMAAQIAEGMAFIEER---NYIHR 128
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ + + GL++ + E T G + + APE + T K
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIE---DNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL EI
Sbjct: 186 SDVWSFGILLTEI 198
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 351 PLDRWLH-HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
L +L H R +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 102 SLRDYLQAHAER----IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENEN 154
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 104 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 157
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 117 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 170
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 117 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 170
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 106 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 159
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 103 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 156
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 105 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 158
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 293 GSRVAVKRLKRSSF-QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--DRYIVYEFVVN 349
G VAVK LK + Q + + EI L+H +++ KGCC D G +V E+V
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV-- 117
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
PL ++PR S+ A + A + +G+A+LH + H +HRD+ A NVLLD +
Sbjct: 118 -PLGSLRDYLPR--HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDR 171
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K VP R G + + APE + + SDV+SFGV L E+
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEF 312
P W+V E L+ + + LG + G + G ++VAVK LK+ S F
Sbjct: 2 PEWEV-PRETLKLVER--------LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAF 51
Query: 313 YSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRM 372
+E +L H LV + YI+ E++ NG L +L P G + L +
Sbjct: 52 LAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLK-TPSGIK-LTINKLL 108
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+A +A+G+AF+ ++ + +HR++RA+N+L+ + + GL++ + E T
Sbjct: 109 DMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIE---DNEYTA 162
Query: 433 MAGGTY--GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G + + APE + T KSDV+SFG+LL EI
Sbjct: 163 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HRD+ N+L++ E
Sbjct: 99 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEF 312
P+W++ E ++ + K LG + G + G + ++VAVK LK + + F
Sbjct: 5 PAWEI-PRESIKLVKK--------LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-F 54
Query: 313 YSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRM 372
E L H LV + YI+ EF+ G L +L GG+ L +
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS-DEGGKVL-LPKLI 112
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ +A+G+A++ K + +HRD+RA+NVL+ E + GL++ + E T
Sbjct: 113 DFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIE---DNEYTA 166
Query: 433 MAGGTY--GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G + + APE + T KS+V+SFG+LL EI
Sbjct: 167 REGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 293 GSRVAVKRLK-------RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--V 343
G VAVK LK RS +QR EI L+H ++V KGCC D G++ + V
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQR------EIEILRTLYHEHIVKYKGCCEDQGEKSVQLV 91
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E+V PL ++PR + A + A + +G+A+LH + H +HR + A NV
Sbjct: 92 MEYV---PLGSLRDYLPR--HCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNV 143
Query: 404 LLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGV 462
LLD + + GL+K VP R G + + APE + + SDV+SFGV
Sbjct: 144 LLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 203
Query: 463 LLLEI 467
L E+
Sbjct: 204 TLYEL 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 293 GSRVAVKRLK-------RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--V 343
G VAVK LK RS +QR EI L+H ++V KGCC D G++ + V
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQR------EIEILRTLYHEHIVKYKGCCEDQGEKSVQLV 90
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E+V PL ++PR + A + A + +G+A+LH + H +HR + A NV
Sbjct: 91 MEYV---PLGSLRDYLPR--HCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNV 142
Query: 404 LLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGV 462
LLD + + GL+K VP R G + + APE + + SDV+SFGV
Sbjct: 143 LLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 202
Query: 463 LLLEI 467
L E+
Sbjct: 203 TLYEL 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 275 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+ LG + G + G + ++VAVK LK + + F E L H LV +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVV 77
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
YI+ E++ G L +L GG+ L + + +A+G+A++ K + +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKS-DEGGKVL-LPKLIDFSAQIAEGMAYIERK---NYI 132
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELT 452
HRD+RA+NVL+ E + GL++ + E T G + + APE + T
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 453 TKSDVYSFGVLLLEI 467
KSDV+SFG+LL EI
Sbjct: 190 IKSDVWSFGILLYEI 204
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G VAVK+L+ S+ + ++F EI L H N+V KG CY G R ++ E++ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L + +D ++ + + +G+ +L K +HR++ N+L++ E
Sbjct: 100 SLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENR 153
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + + G + + APE + ++ + SDV+SFGV+L E+
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 243 SNPAASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLK 302
S P L +W++ E LR K LG G + G +RVA+K LK
Sbjct: 167 SKPQTQGLAKDAWEI-PRESLRLEVK--------LGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 303 RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRG 362
+ + F E +L H LV + + YIV E++ G L +L
Sbjct: 218 PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ET 273
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 422
G+ L + +A +A G+A++ + + VHRD+RA+N+L+ E + GL++ +
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 423 PWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
E T G + + APE T KSDV+SFG+LL E+
Sbjct: 331 E---DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 243 SNPAASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLK 302
S P L +W++ E LR K LG G + G +RVA+K LK
Sbjct: 167 SKPQTQGLAKDAWEI-PRESLRLEVK--------LGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 303 RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRG 362
+ + F E +L H LV + + YIV E++ G L +L
Sbjct: 218 PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ET 273
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 422
G+ L + +A +A G+A++ + + VHRD+RA+N+L+ E + GL++ +
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 423 PWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
E T G + + APE T KSDV+SFG+LL E+
Sbjct: 331 E---DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
D VAVK LK +S +K+F+ E L H ++V G C + +V+E++ +G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 352 LDRWLH-HIPRG--------GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASN 402
L+++L H P L + + +A +A G+ +L + H VHRD+ N
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRN 158
Query: 403 VLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVY 458
L+ E + G+S+ +V GG ++ PE + + TT+SDV+
Sbjct: 159 CLVGENLLVKIGDFGMSR----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 214
Query: 459 SFGVLLLEIRLVLCRRWWTLYT----------LVHSMSLLCAQECLMLFISCNNWPSHLS 508
S GV+L EI + W+ L V C QE L + C H+
Sbjct: 215 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMR 274
Query: 509 QS 510
++
Sbjct: 275 KN 276
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 243 SNPAASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLK 302
S P L +W++ E LR K LG G + G +RVA+K LK
Sbjct: 167 SKPQTQGLAKDAWEI-PRESLRLEVK--------LGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 303 RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRG 362
+ + F E +L H LV + + YIV E++ G L +L
Sbjct: 218 PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKG--ET 273
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 422
G+ L + +A +A G+A++ + + VHRD+RA+N+L+ E + GL++ +
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 423 PWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
E T G + + APE T KSDV+SFG+LL E+
Sbjct: 331 E---DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 353 DRWLHHIPRG------GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
+L GR L+ + ++ +AQG+AFL K + +HRD+ A NVLL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 186
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGV 462
A + GL++ ++M + + G ++APE ++ T +SDV+S+G+
Sbjct: 187 NGHVAKIGDFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 242
Query: 463 LLLEI 467
LL EI
Sbjct: 243 LLWEI 247
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 30/227 (13%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRL-------KRSSFQRK 309
F L ++ N E + +G G + G ++ D S VA+K L + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+EF E+ + L+HPN+V + G H +V EFV G L H + + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWS 122
Query: 370 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFG--AHLMGVGLSKFVPW 424
+++++ +A GI ++ ++ P +VHRD+R+ N+ LDE A + GLS+
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---- 177
Query: 425 EVMQERTVMAG--GTYGYLAPEFVYRNE--LTTKSDVYSFGVLLLEI 467
Q ++G G + ++APE + E T K+D YSF ++L I
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 293 GSRVAVKRLK-RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--VYEFVVN 349
G +VAVK LK S + EI L+H N+V KG C + G I + EF+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
G L +L P+ ++ ++K A + +G+ +L + VHRD+ A NVL++ E
Sbjct: 98 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 151
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYG---YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ GL+K + E +E + + APE + +++ SDV+SFGV L E
Sbjct: 152 QVKIGDFGLTKAI--ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 209
Query: 467 I 467
+
Sbjct: 210 L 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 293 GSRVAVKRLK-RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYI--VYEFVVN 349
G +VAVK LK S + EI L+H N+V KG C + G I + EF+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
G L +L P+ ++ ++K A + +G+ +L + VHRD+ A NVL++ E
Sbjct: 110 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 163
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYG---YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ GL+K + E +E + + APE + +++ SDV+SFGV L E
Sbjct: 164 QVKIGDFGLTKAI--ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 221
Query: 467 I 467
+
Sbjct: 222 L 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 274 NRLLGDSKTGGTYSGILPDGS-----RVAVKRLKRSSFQRKK-EFYSEIGRFARLHHPNL 327
+++G + G Y G+L S VA+K LK ++++ +F E G + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ ++G + I+ E++ NG LD++L L ++ +A G+ +L +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLAN 165
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFV 446
+ VHRD+ A N+L++ + GLS+ + + T G + APE +
Sbjct: 166 M---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 447 YRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+SFG+++ E+ R +W L
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRG------GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
+L GR L+ + ++ +AQG+AFL K + +HRD+ A NVLL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 194
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGV 462
A + GL++ ++M + + G ++APE ++ T +SDV+S+G+
Sbjct: 195 NGHVAKIGDFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 250
Query: 463 LLLEI 467
LL EI
Sbjct: 251 LLWEI 255
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 27/257 (10%)
Query: 219 TTFAIVIWLLAYXXXXXXXXXXXLSN------PAASALVPPSWKVFTTEELRSITKNFSE 272
T F+ + L+AY L+N P L +W++ E LR K
Sbjct: 138 TQFSSLQQLVAYYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEI-PRESLRLEVK---- 192
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
LG G + G +RVA+K LK + + F E +L H LV +
Sbjct: 193 ----LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
+ YIV E++ G L +L G+ L + +A +A G+A++ + +
Sbjct: 248 VVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMN 301
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNE 450
VHRD+RA+N+L+ E + GL + + E T G + + APE
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIE---DNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 451 LTTKSDVYSFGVLLLEI 467
T KSDV+SFG+LL E+
Sbjct: 359 FTIKSDVWSFGILLTEL 375
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 26/250 (10%)
Query: 245 PAASALVPPSWKVFTTEELRSITKNFSEG--------NRLLGDSKTGGTYSGILP-DGSR 295
P + P FT E+ + F++ +++G + G SG L G R
Sbjct: 5 PGMKIFIDP----FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKR 60
Query: 296 ---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
VA+K LK + +++++F SE + HPN++ ++G I+ EF+ NG
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
LD +L + + + +A G+ +L D + VHRD+ A N+L++
Sbjct: 121 LDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVC 174
Query: 412 HLMGVGLSKFVPWEVMQERTVMAGG---TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIR 468
+ GLS+F+ + A G + APE + + T+ SDV+S+G+++ E+
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
Query: 469 LVLCRRWWTL 478
R +W +
Sbjct: 235 SYGERPYWDM 244
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K +K S + +F E +L HP LV + G C +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA-MRMKVATTLAQGIAFLHDKVKPHVVH 395
+V+EF+ +G L +L R R L A + + + +G+A+L + V+H
Sbjct: 94 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELT 452
RD+ A N L+ E + G+++F V+ ++ + GT + +PE + +
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 453 TKSDVYSFGVLLLEI 467
+KSDV+SFGVL+ E+
Sbjct: 203 SKSDVWSFGVLMWEV 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
D VAVK LK + +K+F E L H ++V G C D +V+E++ +G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 352 LDRWLHH-----------IPRGGRS-LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIR 399
L+++L PR + L + + +A+ +A G+ +L + H VHRD+
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLA 160
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG----TYGYLAPEFVYRNELTTKS 455
N L+ + G+S+ +V GG ++ PE + + TT+S
Sbjct: 161 TRNCLVGANLLVKIGDFGMSR----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 456 DVYSFGVLLLEIRLVLCRRWWTL 478
DV+SFGV+L EI + W+ L
Sbjct: 217 DVWSFGVILWEIFTYGKQPWFQL 239
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--DRYIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L R LD + + ++ + +G+ +L + VHRD+ A N+L++ E
Sbjct: 96 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 149
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + G + + APE + N + +SDV+SFGV+L E+
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 243 SNPAASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLK 302
S P L +W++ E LR K LG G + G +RVA+K LK
Sbjct: 250 SKPQTQGLAKDAWEI-PRESLRLEVK--------LGQGCFGEVWMGTWNGTTRVAIKTLK 300
Query: 303 RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRG 362
+ + F E +L H LV + + YIV E++ G L +L
Sbjct: 301 PGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ET 356
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV 422
G+ L + +A +A G+A++ + + VHRD+RA+N+L+ E + GL++ +
Sbjct: 357 GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
Query: 423 PWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
E T G + + APE T KSDV+SFG+LL E+
Sbjct: 414 ---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA-MRMKVATTLAQGIAFLHDKVKPHVVH 395
+V+EF+ +G L +L R R L A + + + +G+A+L + V+H
Sbjct: 72 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELT 452
RD+ A N L+ E + G+++F V+ ++ + GT + +PE + +
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 453 TKSDVYSFGVLLLEI 467
+KSDV+SFGVL+ E+
Sbjct: 181 SKSDVWSFGVLMWEV 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA-MRMKVATTLAQGIAFLHDKVKPHVVH 395
+V+EF+ +G L +L R R L A + + + +G+A+L + V+H
Sbjct: 77 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELT 452
RD+ A N L+ E + G+++F V+ ++ + GT + +PE + +
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 453 TKSDVYSFGVLLLEI 467
+KSDV+SFGVL+ E+
Sbjct: 186 SKSDVWSFGVLMWEV 200
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 277 LGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + G+ A K ++ S + +++ EI A HP +V + G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
G +I+ EF G +D + + RG L V + + + FLH K ++H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTT-- 453
RD++A NVL+ E L G+S + +Q+R G Y ++APE V +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPY-WMAPEVVMCETMKDTP 190
Query: 454 ---KSDVYSFGVLLLEI 467
K+D++S G+ L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRL-------KRSSFQRK 309
F L ++ N E + +G G + G ++ D S VA+K L + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+EF E+ + L+HPN+V + G H +V EFV G L H + + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWS 122
Query: 370 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFG--AHLMGVGLSKFVPW 424
+++++ +A GI ++ ++ P +VHRD+R+ N+ LDE A + G S+
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---- 177
Query: 425 EVMQERTVMAG--GTYGYLAPEFVYRNE--LTTKSDVYSFGVLLLEI 467
Q ++G G + ++APE + E T K+D YSF ++L I
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA-MRMKVATTLAQGIAFLHDKVKPHVVH 395
+V+EF+ +G L +L R R L A + + + +G+A+L + V+H
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELT 452
RD+ A N L+ E + G+++F V+ ++ + GT + +PE + +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 453 TKSDVYSFGVLLLEI 467
+KSDV+SFGVL+ E+
Sbjct: 183 SKSDVWSFGVLMWEV 197
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRL-------KRSSFQRK 309
F L ++ N E + +G G + G ++ D S VA+K L + ++
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+EF E+ + L+HPN+V + G H +V EFV G L H + + W+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDL---YHRLLDKAHPIKWS 122
Query: 370 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFG--AHLMGVGLSKFVPW 424
+++++ +A GI ++ ++ P +VHRD+R+ N+ LDE A + LS+
Sbjct: 123 VKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---- 177
Query: 425 EVMQERTVMAG--GTYGYLAPEFVYRNE--LTTKSDVYSFGVLLLEI 467
Q ++G G + ++APE + E T K+D YSF ++L I
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L R LD + + ++ + +G+ +L + VHRD+ A N+L++ E
Sbjct: 99 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 152
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + G + + APE + N + +SDV+SFGV+L E+
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L R LD + + ++ + +G+ +L + VHRD+ A N+L++ E
Sbjct: 112 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 165
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + G + + APE + N + +SDV+SFGV+L E+
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 277 LGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + G+ A K ++ S + +++ EI A HP +V + G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
G +I+ EF G +D + + RG L V + + + FLH K ++H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTT-- 453
RD++A NVL+ E L G+S + +Q+R G Y ++APE V +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPY-WMAPEVVMCETMKDTP 198
Query: 454 ---KSDVYSFGVLLLEI 467
K+D++S G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA-MRMKVATTLAQGIAFLHDKVKPHVVH 395
+V+EF+ +G L +L R R L A + + + +G+A+L + V+H
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELT 452
RD+ A N L+ E + G+++F V+ ++ + GT + +PE + +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 453 TKSDVYSFGVLLLEI 467
+KSDV+SFGVL+ E+
Sbjct: 183 SKSDVWSFGVLMWEV 197
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNG 350
G+ VAVK+L+ S ++++F EI LH +V +G Y G + +V E++ +G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +L R LD + + ++ + +G+ +L + VHRD+ A N+L++ E
Sbjct: 100 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 153
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGY-LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K +P + G + + APE + N + +SDV+SFGV+L E+
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 78 E-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 189 SDVWSFGILLTEL 201
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 74 E-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 185 SDVWSFGILLTEL 197
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 76 E-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 187 SDVWSFGILLTEL 199
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 353 DRWLH--------------HIPRG-----GRSLDWAMRMKVATTLAQGIAFLHDKVKPHV 393
+L P G GR L+ + ++ +AQG+AFL K +
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NC 179
Query: 394 VHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRN 449
+HRD+ A NVLL A + GL++ ++M + + G ++APE ++
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDC 235
Query: 450 ELTTKSDVYSFGVLLLEI 467
T +SDV+S+G+LL EI
Sbjct: 236 VYTVQSDVWSYGILLWEI 253
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 289 ILPDGSR--VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 346
+LP+ + VAVK LK +S +++F E L H ++V G C + +V+E+
Sbjct: 65 LLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124
Query: 347 VVNGPLDRWLH-HIPR-----GGRS-----LDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+ +G L+R+L H P GG L + VA+ +A G+ +L H VH
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 181
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
RD+ N L+ + + G+S+ + + + RT++ ++ PE + + T
Sbjct: 182 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML---PIRWMPPESILYRKFT 238
Query: 453 TKSDVYSFGVLLLEIRLVLCRRWWTL 478
T+SDV+SFGV+L EI + W+ L
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQPWYQL 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 274 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+ LG + G + ++VAVK +K S + F +E L H LV +
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 78
Query: 334 CYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHV 393
YI+ EF+ G L +L G + + +A+G+AF+ + +
Sbjct: 79 VTKE-PIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 132
Query: 394 VHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNEL 451
+HRD+RA+N+L+ + GL++ + E T G + + APE +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 452 TTKSDVYSFGVLLLEI 467
T KSDV+SFG+LL+EI
Sbjct: 190 TIKSDVWSFGILLMEI 205
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 289 ILPDGSR--VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEF 346
+LP+ + VAVK LK +S +++F E L H ++V G C + +V+E+
Sbjct: 36 LLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 95
Query: 347 VVNGPLDRWLH-HIPR-----GGRS-----LDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+ +G L+R+L H P GG L + VA+ +A G+ +L H VH
Sbjct: 96 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 152
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
RD+ N L+ + + G+S+ + + + RT++ ++ PE + + T
Sbjct: 153 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML---PIRWMPPESILYRKFT 209
Query: 453 TKSDVYSFGVLLLEIRLVLCRRWWTL 478
T+SDV+SFGV+L EI + W+ L
Sbjct: 210 TESDVWSFGVVLWEIFTYGKQPWYQL 235
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 277 LGDSKTGGTY----SGILPDGSR--VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
LG+ G + +LP+ + VAVK LK +S +++F E L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWLH-HIPR-----GGRS-----LDWAMRMKVATTLA 379
G C + +V+E++ +G L+R+L H P GG L + VA+ +A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGG 436
G+ +L H VHRD+ N L+ + + G+S+ + + + RT++
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML--- 199
Query: 437 TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
++ PE + + TT+SDV+SFGV+L EI + W+ L
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 241
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 275 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+ LG+ + G + G ++VA+K LK + + F E +L H LV +
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS-PESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ YIV E++ G L +L GR+L + +A +A G+A++ + + +
Sbjct: 74 SEE-PIYIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELT 452
HRD+R++N+L+ + GL++ + E T G + + APE T
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 453 TKSDVYSFGVLLLEI 467
KSDV+SFG+LL E+
Sbjct: 185 IKSDVWSFGILLTEL 199
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+G + G + G + +VA+K ++ + +++F E +L HP LV + G C +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMR-MKVATTLAQGIAFLHDKVKPHVVH 395
+V EF+ +G L +L R R L A + + + +G+A+L + V+H
Sbjct: 75 QAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---YGYLAPEFVYRNELT 452
RD+ A N L+ E + G+++F V+ ++ + GT + +PE + +
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRF----VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 453 TKSDVYSFGVLLLEI 467
+KSDV+SFGVL+ E+
Sbjct: 184 SKSDVWSFGVLMWEV 198
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 289 ILPDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 344
I DG R+ A+KR+K +S ++F E+ +L HHPN++ + G C G Y+
Sbjct: 36 IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 95
Query: 345 EFVVNGPLDRWLHHIPRGGRSLD----WAMRMKVATTL------------AQGIAFLHDK 388
E+ +G L +L R R L+ +A+ A+TL A+G+ +L K
Sbjct: 96 EYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 151
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+HRD+ A N+L+ E + A + GLS+ EV ++T M ++A E +
Sbjct: 152 ---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT-MGRLPVRWMAIESLNY 205
Query: 449 NELTTKSDVYSFGVLLLEI 467
+ TT SDV+S+GVLL EI
Sbjct: 206 SVYTTNSDVWSYGVLLWEI 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G+ +LGD + G++VAVK +K + + F +E +L H NLV + G
Sbjct: 207 GDVMLGDYR-----------GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 333 CCYDH-GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP 391
+ G YIV E++ G L +L RG L +K + + + + +L
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 308
Query: 392 HVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRN 449
+ VHRD+ A NVL+ E+ A + GL+K + + G + APE +
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREK 361
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +TKSDV+SFG+LL EI
Sbjct: 362 KFSTKSDVWSFGILLWEI 379
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 289 ILPDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 344
I DG R+ A+KR+K +S ++F E+ +L HHPN++ + G C G Y+
Sbjct: 46 IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 105
Query: 345 EFVVNGPLDRWLHHIPRGGRSLD----WAMRMKVATTL------------AQGIAFLHDK 388
E+ +G L +L R R L+ +A+ A+TL A+G+ +L K
Sbjct: 106 EYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 161
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+HRD+ A N+L+ E + A + GLS+ EV ++T M ++A E +
Sbjct: 162 ---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT-MGRLPVRWMAIESLNY 215
Query: 449 NELTTKSDVYSFGVLLLEI 467
+ TT SDV+S+GVLL EI
Sbjct: 216 SVYTTNSDVWSYGVLLWEI 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E ++ H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G+ +LGD + G++VAVK +K + + F +E +L H NLV + G
Sbjct: 20 GDVMLGDYR-----------GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 333 CCYDH-GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP 391
+ G YIV E++ G L +L RG L +K + + + + +L
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 121
Query: 392 HVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRN 449
+ VHRD+ A NVL+ E+ A + GL+K + + G + APE +
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREK 174
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +TKSDV+SFG+LL EI
Sbjct: 175 KFSTKSDVWSFGILLWEI 192
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + ++ +A G+A++ + + VHR
Sbjct: 82 E-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 193 SDVWSFGILLTEL 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 275 RLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVA 329
+++G + G SG L G R VA+K LK + +++++F SE + HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
++G I+ EF+ NG LD +L + + + +A G+ +L D
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADM- 128
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG---TYGYLAPEFV 446
+ VHR + A N+L++ + GLS+F+ + A G + APE +
Sbjct: 129 --NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 447 YRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G+++ E+ R +W +
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + ++ +A G+A++ + + VHR
Sbjct: 82 E-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHR 135
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIE---DNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 193 SDVWSFGILLTEL 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 29/192 (15%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRGGRSLD----WAMRMKVATT---------LAQGIAFLHDKVKPHVVHRDIR 399
L+ + R R L+ +A+ A+T +AQG+AFL K + +HRD+
Sbjct: 138 ---LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVA 191
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKS 455
A NVLL A + GL++ ++M + + G ++APE ++ T +S
Sbjct: 192 ARNVLLTNGHVAKIGDFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 456 DVYSFGVLLLEI 467
DV+S+G+LL EI
Sbjct: 248 DVWSYGILLWEI 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
++G IV E++ NG LD +L + + + +A G+ +L D
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-YGYLAPEFVY 447
VHRD+ A N+L++ + GLS+ + + T G + +PE +
Sbjct: 138 ---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 448 RNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G++L E+ R +W +
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G+ +LGD + G++VAVK +K + + F +E +L H NLV + G
Sbjct: 35 GDVMLGDYR-----------GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 333 CCYDH-GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP 391
+ G YIV E++ G L +L RG L +K + + + + +L
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 136
Query: 392 HVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRN 449
+ VHRD+ A NVL+ E+ A + GL+K + + G + APE +
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREK 189
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +TKSDV+SFG+LL EI
Sbjct: 190 KFSTKSDVWSFGILLWEI 207
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 29/192 (15%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATT-------------LAQGIAFLHDKVKPHVVHRDIR 399
L+ + R R L+ +A + +AQG+AFL K + +HRD+
Sbjct: 138 ---LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVA 191
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKS 455
A NVLL A + GL++ ++M + + G ++APE ++ T +S
Sbjct: 192 ARNVLLTNGHVAKIGDFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 456 DVYSFGVLLLEI 467
DV+S+G+LL EI
Sbjct: 248 DVWSYGILLWEI 259
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
++G IV E++ NG LD +L + + + +A G+ +L D
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-YGYLAPEFVY 447
VHRD+ A N+L++ + GLS+ + + T G + +PE +
Sbjct: 155 ---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 448 RNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G++L E+ R +W +
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEM 242
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 12 LKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 71
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 72 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 132 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 185
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 472 CRRWWTL 478
R +W +
Sbjct: 246 ERPYWEM 252
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
IV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 75 E-PIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 128
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+RA+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 186 SDVWSFGILLTEL 198
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 274 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+ LG + G + ++VAVK +K S + F +E L H LV +
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 251
Query: 334 CYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHV 393
YI+ EF+ G L +L G + + +A+G+AF+ + +
Sbjct: 252 VTKE-PIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 305
Query: 394 VHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNEL 451
+HRD+RA+N+L+ + GL++ + E T G + + APE +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIE---DNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 452 TTKSDVYSFGVLLLEI 467
T KSDV+SFG+LL+EI
Sbjct: 363 TIKSDVWSFGILLMEI 378
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
++G IV E++ NG LD +L + + + +A G+ +L D
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVY 447
VHRD+ A N+L++ + GLS+ + + T G + +PE +
Sbjct: 167 ---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 448 RNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G++L E+ R +W +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G+ +LGD + G++VAVK +K + + F +E +L H NLV + G
Sbjct: 26 GDVMLGDYR-----------GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 333 CCYDH-GDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP 391
+ G YIV E++ G L +L RG L +K + + + + +L
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 127
Query: 392 HVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRN 449
+ VHRD+ A NVL+ E+ A + GL+K + + G + APE +
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREA 180
Query: 450 ELTTKSDVYSFGVLLLEI 467
+TKSDV+SFG+LL EI
Sbjct: 181 AFSTKSDVWSFGILLWEI 198
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 292 DGSRVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
DG VA+K+++ K + EI +L+HPN++ + + IV E
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L R + H + R + K L + +H + V+HRDI+ +NV +
Sbjct: 116 AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITAT 172
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
L +GL +F + +++ GT Y++PE ++ N KSD++S G LL E+
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLV--GTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G + +K L R + ++ F E+ L HPN++ G Y + E++ G L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 353 DRWLHHIPRGGRSLD----WAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
+ +S+D W+ R+ A +A G+A+LH +++HRD+ + N L+ E
Sbjct: 95 RGII-------KSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVREN 144
Query: 409 FGAHLMGVGLSKFVPWEVMQ-------------ERTVMAGGTYGYLAPEFVYRNELTTKS 455
+ GL++ + E Q +R + G Y ++APE + K
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY-WMAPEMINGRSYDEKV 203
Query: 456 DVYSFGVLLLEI 467
DV+SFG++L EI
Sbjct: 204 DVFSFGIVLCEI 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG G + G +RVA+K LK + + F E +L H LV + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E++ G L +L G+ L + +A +A G+A++ + + VHR
Sbjct: 85 E-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK 454
D+ A+N+L+ E + GL++ + E T G + + APE T K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 455 SDVYSFGVLLLEI 467
SDV+SFG+LL E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GL++ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E + NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 30/199 (15%)
Query: 289 ILPDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY 344
I DG R+ A+KR+K +S ++F E+ +L HHPN++ + G C G Y+
Sbjct: 43 IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 102
Query: 345 EFVVNGPLDRWLHHIPRGGRSLD----WAMRMKVATTL------------AQGIAFLHDK 388
E+ +G L +L R R L+ +A+ A+TL A+G+ +L K
Sbjct: 103 EYAPHGNLLDFL----RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 158
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+HR++ A N+L+ E + A + GLS+ EV ++T M ++A E +
Sbjct: 159 ---QFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKT-MGRLPVRWMAIESLNY 212
Query: 449 NELTTKSDVYSFGVLLLEI 467
+ TT SDV+S+GVLL EI
Sbjct: 213 SVYTTNSDVWSYGVLLWEI 231
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 274 NRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
++++G + G SG L S+ VA+K LK + +++++F E + HPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
++G IV E + NG LD +L + + + +A G+ +L D
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-YGYLAPEFVY 447
VHRD+ A N+L++ + GLS+ + + T G + +PE +
Sbjct: 138 ---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 448 RNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G++L E+ R +W +
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E++ NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GL + + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 268 KNFSEGNRLLGDSKTGGTYS----GILP--DGSRVAVKRLKR-SSFQRKKEFYSEIGRFA 320
+N E R +G+ G + G+LP + VAVK LK +S + +F E A
Sbjct: 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPR------------------- 361
+PN+V + G C +++E++ G L+ +L +
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 362 -GGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK 420
G L A ++ +A +A G+A+L ++ VHRD+ N L+ E + GLS+
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 421 FVPWEVMQERTVMAGGTYG----YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ A G ++ PE ++ N TT+SDV+++GV+L EI
Sbjct: 223 ----NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 296 VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VA+K LK +R ++EF SE + HPN++ ++G + I+ EF+ NG LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+L + G ++ + M +A G+ +L + VHRD+ A N+L++ +
Sbjct: 107 FL-RLNDGQFTVIQLVGM--LRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVS 160
Query: 415 GVGLSKFVPWEVMQE-RTVMAGGTYG--YLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
GLS+F+ T GG + APE + + T+ SD +S+G+++ E+
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 472 CRRWWTL 478
R +W +
Sbjct: 221 ERPYWDM 227
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 146
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 202
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 292 DGSRVAVKRLK--RSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
DG + +K + R S + ++E E+ A + HPN+V + ++G YIV ++
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 350 GPLDRWLHH----IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
G L + ++ + + + LDW +++ +A + +HD+ ++HRDI++ N+ L
Sbjct: 108 GDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDR---KILHRDIKSQNIFL 158
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLL 465
++ L G+++ + V R + GT YL+PE KSD+++ G +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACI--GTPYYLSPEICENKPYNNKSDIWALGCVLY 216
Query: 466 EI 467
E+
Sbjct: 217 EL 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 274 NRLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
R++G + G SG L G R VA+K LK + +++++F E + HPN+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
++G IV EF+ NG LD +L + + + +A G+ +L D
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLR---KHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVY 447
VHRD+ A N+L++ + GLS+ + + T G + APE +
Sbjct: 165 ---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 448 RNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G+++ E+ R +W +
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDM 252
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 207
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 263
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 20/235 (8%)
Query: 258 FTTEELRSITKNFSEG--------NRLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS- 304
FT E+ + F++ +++G + G SG L G R VA+K LK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 305 SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGR 364
+ +++++F SE + HPN++ ++G I+ E++ NG LD +L GR
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGR 127
Query: 365 SLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 424
+ + + G+ +L D VHRD+ A N+L++ + G+S+ +
Sbjct: 128 -FTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 425 EVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T G + APE + + T+ SDV+S+G+++ E+ R +W +
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 275 RLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVA 329
R++G + G SG L G R VA+K LK + +++++F E + HPN++
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
++G IV E++ NG LD +L + + + ++ G+ +L D
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLK---KNDGQFTVIQLVGMLRGISAGMKYLSDM- 143
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYR 448
VHRD+ A N+L++ + GLS+ + + T G + APE +
Sbjct: 144 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 449 NELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G+++ E+ R +W +
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEM 231
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 10/187 (5%)
Query: 296 VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VA+K LK +R ++EF SE + HPN++ ++G + I+ EF+ NG LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+L + G ++ + M +A G+ +L + VHRD+ A N+L++ +
Sbjct: 105 FL-RLNDGQFTVIQLVGM--LRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVS 158
Query: 415 GVGLSKFVPWEVMQER-TVMAGGTYG--YLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
GLS+F+ T GG + APE + + T+ SD +S+G+++ E+
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 472 CRRWWTL 478
R +W +
Sbjct: 219 ERPYWDM 225
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 149
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 149
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT-GAKLPVKWM 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSR-- 295
L P V P T+ + K N +++G + G SG L S+
Sbjct: 14 LKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 296 --VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
VA+K LK + +++++F E + HPN++ ++G IV E + NG L
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
D +L + + + +A G+ +L D VHRD+ A N+L++
Sbjct: 134 DSFLR---KHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 413 LMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVL 471
+ GLS+ + + T G + +PE + + T+ SDV+S+G++L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 472 CRRWWTL 478
R +W +
Sbjct: 248 ERPYWEM 254
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 153
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 154 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 209
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 148
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 204
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
Query: 290 LPDGSRVAVKRLKRS-SFQRKKEFYSEIGRFAR-LHHPNLVAVKGCCYDHGDRYIVYEFV 347
+P G +AVKR++ + + Q +K ++ R + P V G + GD +I E +
Sbjct: 29 VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME-L 87
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
++ LD++ + G+++ + K+A ++ + + LH K+ V+HRD++ SNVL++
Sbjct: 88 MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINA 145
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFV----YRNELTTKSDVYSFGVL 463
+ G+S ++ +V ++ + G Y+APE + + + KSD++S G+
Sbjct: 146 LGQVKMCDFGISGYLVDDVAKD---IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202
Query: 464 LLEIRLV 470
++E+ ++
Sbjct: 203 MIELAIL 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 274 NRLLGDSKTGGT-YSGILPDGSR---VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLV 328
+++G +G Y + G R VA+K LK +R +++F SE + HPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA----F 384
++G IV E++ NG LD +L R+ D + + +G+ +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL-------RTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAP 443
L D VHRD+ A NVL+D + GLS+ + + T G + AP
Sbjct: 167 LSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 444 EFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
E + ++ SDV+SFGV++ E+ R +W +
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ F
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKF 148
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + ++ + +T A ++
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 204
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 34/235 (14%)
Query: 294 SRVAVKRLKRSSFQRKK-------------EFYSEIGRFARLHHPNLVAVKGCCYDHGDR 340
S A+K +K+S F + + E Y+EI L HPN++ + D
Sbjct: 62 SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121
Query: 341 YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRA 400
Y+V EF G L + I R D + + GI +LH K ++VHRDI+
Sbjct: 122 YLVTEFYEGGEL--FEQIINR--HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKP 174
Query: 401 SNVLLDEE---FGAHLMGVGLSKFVPWEV-MQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
N+LL+ + ++ GLS F + +++R GT Y+APE V + + K D
Sbjct: 175 ENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL----GTAYYIAPE-VLKKKYNEKCD 229
Query: 457 VYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLLCAQECLMLFISCNNWPSHLSQSK 511
V+S GV++ ++LC + + + ++ E + N+W + ++K
Sbjct: 230 VWSCGVIMY---ILLC--GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 275 RLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVA 329
+++G + G SG L G R VA+K LK + +++++F SE + HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
++G I+ E++ NG LD +L GR + + + G+ +L D
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGR-FTVIQLVGMLRGIGSGMKYLSDM- 129
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-YGYLAPEFVYR 448
VHRD+ A N+L++ + G+S+ + + T G + APE +
Sbjct: 130 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 449 NELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G+++ E+ R +W +
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 274 NRLLGDSKTGGT-YSGILPDGSR---VAVKRLKRSSFQR-KKEFYSEIGRFARLHHPNLV 328
+++G +G Y + G R VA+K LK +R +++F SE + HPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA----F 384
++G IV E++ NG LD +L R+ D + + +G+ +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL-------RTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAP 443
L D VHRD+ A NVL+D + GLS+ + + T G + AP
Sbjct: 167 LSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 444 EFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
E + ++ SDV+SFGV++ E+ R +W +
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 275 RLLGDSKTGGTYSGILP-DGSR---VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVA 329
+++G + G SG L G R VA+K LK + +++++F SE + HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
++G I+ E++ NG LD +L GR + + + G+ +L D
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGR-FTVIQLVGMLRGIGSGMKYLSDM- 135
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-YGYLAPEFVYR 448
VHRD+ A N+L++ + G+S+ + + T G + APE +
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 449 NELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
+ T+ SDV+S+G+++ E+ R +W +
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 274 NRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+ LG + G + ++VAVK +K S + F +E L H LV +
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 245
Query: 334 CYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHV 393
YI+ EF+ G L +L G + + +A+G+AF+ + +
Sbjct: 246 VTKE-PIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQR---NY 299
Query: 394 VHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTT 453
+HRD+RA+N+L+ + GL++ V A + APE + T
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEAINFGSFTI 348
Query: 454 KSDVYSFGVLLLEI 467
KSDV+SFG+LL+EI
Sbjct: 349 KSDVWSFGILLMEI 362
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
VA+K+++ S +K F E+ + +R++HPN+V + G C + +V E+ G L
Sbjct: 35 VAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNV 90
Query: 356 LHHIPRGGRSLDW---AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
LH G L + A M +QG+A+LH ++HRD++ N+LL G
Sbjct: 91 LH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA--GGT 144
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++ + F +Q G+ ++APE + + K DV+S+G++L E+
Sbjct: 145 VLKI--CDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
VA+K+++ S +K F E+ + +R++HPN+V + G C + +V E+ G L
Sbjct: 34 VAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNV 89
Query: 356 LHHIPRGGRSLDW---AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
LH G L + A M +QG+A+LH ++HRD++ N+LL G
Sbjct: 90 LH----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA--GGT 143
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++ + F +Q G+ ++APE + + K DV+S+G++L E+
Sbjct: 144 VLKI--CDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 295 RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
+VAVK LK ++ +KE SE+ + L H N+V + G C G ++ E+ G L
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 353 DRWLHHIPRGG------------RSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRA 400
+L G L + ++ +AQG+AFL K + +HRD+ A
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 194
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSD 456
NVLL A + GL++ ++M + + G ++APE ++ T +SD
Sbjct: 195 RNVLLTNGHVAKIGDFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 250
Query: 457 VYSFGVLLLEI 467
V+S+G+LL EI
Sbjct: 251 VWSYGILLWEI 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 290 LPDGSRVAVKRLKRS-SFQRKKEFYSEIGRFAR-LHHPNLVAVKGCCYDHGDRYIVYEFV 347
+P G +AVKR++ + + Q +K ++ R + P V G + GD +I E +
Sbjct: 73 VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME-L 131
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
++ LD++ + G+++ + K+A ++ + + LH K+ V+HRD++ SNVL++
Sbjct: 132 MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINA 189
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFV----YRNELTTKSDVYSFGVL 463
+ G+S ++ V + + G Y+APE + + + KSD++S G+
Sbjct: 190 LGQVKMCDFGISGYLVDSVAK---TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 246
Query: 464 LLEIRLV 470
++E+ ++
Sbjct: 247 MIELAIL 253
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G +VAVK++ QR++ ++E+ HH N+V + + ++V EF+ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
+ H ++ V ++ + +++LH++ V+HRDI++ ++LL +
Sbjct: 130 TDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIK 181
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
L G V EV + + ++ GT ++APE + R T+ D++S G++++E+
Sbjct: 182 LSDFGFCAQVSKEVPKRKXLV--GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 261 EELRSIT------KNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFY 313
E+LRSI K ++ ++ G +G Y+ + + G VA++++ +K+
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
+EI +PN+V + ++V E++ G L + +D
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAA 120
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTV 432
V Q + FLH V+HRDI++ N+LL + L G ++ P + +R+
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRST 175
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
M G Y ++APE V R K D++S G++ +E+
Sbjct: 176 MVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L +L + ++ +++ + + + +L K +HR
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L +L + ++ +++ + + + +L K +HR
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 186 SDIWAFGVLMWEI 198
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 261 EELRSIT------KNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFY 313
E+LRSI K ++ ++ G +G Y+ + + G VA++++ +K+
Sbjct: 8 EKLRSIVSVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 66
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
+EI +PN+V + ++V E++ G L + +D
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAA 121
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTV 432
V Q + FLH V+HRDI++ N+LL + L G ++ P + +R+
Sbjct: 122 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSX 176
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
M G Y ++APE V R K D++S G++ +E+
Sbjct: 177 MVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 210
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGILP--DGS--RVAVK--RLKRSSFQRKKEFYSEIGRF 319
I +N ++LG+ + G G L DG+ +VAVK +L SS + +EF SE
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 320 ARLHHPNLVAVKGCCYDHGDR-----YIVYEFVVNGPLDRWLHH--IPRGGRSLDWAMRM 372
HPN++ + G C + + ++ F+ G L +L + + G + + +
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
K +A G+ +L ++ + +HRD+ A N +L ++ + GLSK + +
Sbjct: 151 KFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGR 207
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+A ++A E + T+KSDV++FGV + EI
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 261 EELRSIT------KNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFY 313
E+LRSI K ++ ++ G +G Y+ + + G VA++++ +K+
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
+EI +PN+V + ++V E++ G L + +D
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAA 120
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTV 432
V Q + FLH V+HRDI++ N+LL + L G ++ P + +R+
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSX 175
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
M G Y ++APE V R K D++S G++ +E+
Sbjct: 176 MVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 148
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 204
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 140
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 196
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L +L + ++ +++ + + + +L K +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 187 SDIWAFGVLMWEI 199
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 167
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 223
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 147
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK--FVPWEVMQERTVMAGGTYGYLA 442
L K VHRD+ A N +LDE+F + GL++ + A ++A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 443 PEFVYRNELTTKSDVYSFGVLLLEI 467
E + + TTKSDV+SFGVLL E+
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC--CYDHGDR--------- 340
DG +KR+K ++ + ++E + A+L H N+V GC +D+
Sbjct: 35 DGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90
Query: 341 -----YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+I EF G L++W+ R G LD + +++ + +G+ ++H K +++
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIN 145
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS 455
RD++ SN+ L + + GL + + + R + GT Y++PE + + +
Sbjct: 146 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR---SKGTLRYMSPEQISSQDYGKEV 202
Query: 456 DVYSFGVLLLEI 467
D+Y+ G++L E+
Sbjct: 203 DLYALGLILAEL 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 166
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 222
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 147
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 203
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 236 WSFGVLLWEI 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 148
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 204
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 145
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 201
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L +L + ++ +++ + + + +L K +HR
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 182 SDIWAFGVLMWEI 194
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L +L + ++ +++ + + + +L K +HR
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L L+++ +++ + + + +L K +HR
Sbjct: 76 QRPIFIITEYMANGCL---LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 187 SDIWAFGVLMWEI 199
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRK-KEFYSEIGRFARL 322
SI ++ E ++G T + P +VA+KR+ Q E EI ++
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 65
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS----LDWAMRMKVATTL 378
HHPN+V+ + ++V + + G + + HI G LD + + +
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 379 AQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--- 435
+G+ +LH K +HRD++A N+LL E+ + G+S F+ R +
Sbjct: 126 LEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 436 GTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
GT ++APE + + K+D++SFG+ +E+
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
LG + G G VA+K +K S + EF E L H LV + G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+I+ E++ NG L +L + ++ +++ + + + +L K +HR
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG--YLAPEFVYRNELTTK 454
D+ A N L++++ + GLS++V + E T G + + PE + ++ ++K
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 455 SDVYSFGVLLLEI 467
SD+++FGVL+ EI
Sbjct: 193 SDIWAFGVLMWEI 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++L+H N+V G R+I+ E + G L +L PR +
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 207
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 13/213 (6%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRK-KEFYSEIGRFARL 322
SI ++ E ++G T + P +VA+KR+ Q E EI ++
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 70
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS----LDWAMRMKVATTL 378
HHPN+V+ + ++V + + G + + HI G LD + + +
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 379 AQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--- 435
+G+ +LH K +HRD++A N+LL E+ + G+S F+ R +
Sbjct: 131 LEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 436 GTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
GT ++APE + + K+D++SFG+ +E+
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 143
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 144 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 199
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGIL--PDGSRV--AVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLV 328
N ++G G Y G L DG ++ AVK L R + +F +E HPN++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 329 AVKGCCY-DHGDRYIVYEFVVNGPLDRWLH---HIPRGGRSLDWAMRMKVATTLAQGIAF 384
++ G C G +V ++ +G L ++ H P + + ++ +A+G+ +
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKY 146
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMAGGTYGYL 441
L K VHRD+ A N +LDE+F + GL++ + + + +T A ++
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 202
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
A E + + TTKSDV+SFGVLL E+
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 261 EELRSIT------KNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFY 313
E+LRSI K ++ ++ G +G Y+ + + G VA++++ +K+
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII 65
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
+EI +PN+V + ++V E++ G L + +D
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAA 120
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTV 432
V Q + FLH V+HRDI++ N+LL + L G ++ P + +R+
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSE 175
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
M G Y ++APE V R K D++S G++ +E+
Sbjct: 176 MVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEM 209
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 96/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++L+H N+V G R+I+ E + G L +L PR +
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 193
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 160
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 220
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 221 WSFGVLLWEI 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 236 WSFGVLLWEI 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 216
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 277 WSFGVLLWEI 286
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 236 WSFGVLLWEI 245
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
++ +EI L HPN++ + D+ + YIV E G L + G++L
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 370 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH----LMGVGLSKFVPWE 425
++ + +A+ H + HVVH+D++ N+L ++ H ++ GL++ +
Sbjct: 125 YVAELMKQMMNALAYFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD 180
Query: 426 VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
E + A GT Y+APE V++ ++T K D++S GV++
Sbjct: 181 ---EHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVM 215
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VAVK LK +S ++ SE +++HP+++ + G C G ++ E+ G L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 355 WLHHIPRGG--------------------RSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+L + G R+L + A ++QG+ +L + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD+ A N+L+ E + GLS+ V E + ++A E ++ + TT+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 455 SDVYSFGVLLLEIRL--------VLCRRWWTLYTLVHSMSLL--CAQECLMLFISC 500
SDV+SFGVLL EI + R + L H M C++E L + C
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 235
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 236 WSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 168
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 169 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 228
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 229 WSFGVLLWEI 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VAVK LK +S ++ SE +++HP+++ + G C G ++ E+ G L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 355 WLHHIPRGG--------------------RSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+L + G R+L + A ++QG+ +L + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLV 172
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD+ A N+L+ E + GLS+ V E + ++A E ++ + TT+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 455 SDVYSFGVLLLEIRL--------VLCRRWWTLYTLVHSMSLL--CAQECLMLFISC 500
SDV+SFGVLL EI + R + L H M C++E L + C
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 167
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 168 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 227
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 228 WSFGVLLWEI 237
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 274 NRLLGDSKTGGTYSGILPD--GSR--VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
NR+LG+ G Y G+ + G + VAVK K+ + K++F SE L HP++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
+ G + +I+ E G L H++ R SL + + + + +A+L
Sbjct: 73 KLIGII-EEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+ VHRDI N+L+ L GLS+++ E + +V +++PE +
Sbjct: 129 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESINF 184
Query: 449 NELTTKSDVYSFGVLLLEI 467
TT SDV+ F V + EI
Sbjct: 185 RRFTTASDVWMFAVCMWEI 203
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 294 SRVAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
++VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 352 LDRWLH--------------HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
L +L H P L + A +A+G+ +L K +HRD
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPE--EQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 164
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A NVL+ E+ + GL++ + ++T ++APE ++ T +SDV
Sbjct: 165 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 224
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 225 WSFGVLLWEI 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 271 SEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRSSFQRKKEFYSEIGRFAR-LHHP 325
+ +R++G G Y G D ++ A+K L R + ++ E + G R L+HP
Sbjct: 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 326 NLVAVKGCCYD-HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
N++A+ G G +++ ++ +G L +++ R D + +A+G+ +
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEY 139
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP----WEVMQERTVMAGGTYGY 440
L ++ VHRD+ A N +LDE F + GL++ + + V Q R +
Sbjct: 140 LAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 441 LAPEFVYRNELTTKSDVYSFGVLLLEI 467
L YR TTKSDV+SFGVLL E+
Sbjct: 197 LESLQTYR--FTTKSDVWSFGVLLWEL 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKE 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRG 362
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L DR + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKG 111
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFGAHLMGVGLS 419
+ A R+ + + +LHD +VHRD++ N+L LDE+ + GLS
Sbjct: 112 FYTERDASRL--IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 420 KFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
K P V+ A GT GY+APE + + + D +S GV+
Sbjct: 167 KMEDPGSVLS----TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 58 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 178 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG-------D 227
Query: 426 VMQERTVMAGGTY----------GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
R + G Y ++ PE T+K+D +SFGVLL EI
Sbjct: 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKE 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRG 362
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L DR + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKG 111
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFGAHLMGVGLS 419
+ A R+ + + +LHD +VHRD++ N+L LDE+ + GLS
Sbjct: 112 FYTERDASRL--IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 420 KFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
K P V+ A GT GY+APE + + + D +S GV+
Sbjct: 167 KMEDPGSVLS----TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 129 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 184
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 185 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 274 NRLLGDSKTGGTYSGILPD--GSR--VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
NR+LG+ G Y G+ + G + VAVK K+ + K++F SE L HP++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
+ G + +I+ E G L H++ R SL + + + + +A+L
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+ VHRDI N+L+ L GLS+++ E + +V +++PE +
Sbjct: 145 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESINF 200
Query: 449 NELTTKSDVYSFGVLLLEI 467
TT SDV+ F V + EI
Sbjct: 201 RRFTTASDVWMFAVCMWEI 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 192
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 35 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 94
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 155 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG-------D 204
Query: 426 VMQERTVMAGGTY----------GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
R + G Y ++ PE T+K+D +SFGVLL EI
Sbjct: 205 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKE 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRG 362
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L DR + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKG 111
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFGAHLMGVGLS 419
+ A R+ + + +LHD +VHRD++ N+L LDE+ + GLS
Sbjct: 112 FYTERDASRL--IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 420 KFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
K P V+ A GT GY+APE + + + D +S GV+
Sbjct: 167 KMEDPGSVLS----TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 34/236 (14%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VAVK LK +S ++ SE +++HP+++ + G C G ++ E+ G L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 355 WLHHIPRGG--------------------RSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+L + G R+L + A ++QG+ +L + +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD+ A N+L+ E + GLS+ V E + ++A E ++ + TT+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 455 SDVYSFGVLLLEIRL--------VLCRRWWTLYTLVHSMSLL--CAQECLMLFISC 500
SDV+SFGVLL EI + R + L H M C++E L + C
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 274 NRLLGDSKTGGTYSGILPD--GSR--VAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLV 328
NR+LG+ G Y G+ + G + VAVK K+ + K++F SE L HP++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 329 AVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
+ G + +I+ E G L H++ R SL + + + + +A+L
Sbjct: 77 KLIGII-EEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+ VHRDI N+L+ L GLS+++ E + +V +++PE +
Sbjct: 133 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESINF 188
Query: 449 NELTTKSDVYSFGVLLLEI 467
TT SDV+ F V + EI
Sbjct: 189 RRFTTASDVWMFAVCMWEI 207
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 192
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-QD 193
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 154 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 209
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 210 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 257 VFTTEELRSITKNF-SEGN-RLLGDS--KTGGTYSGIL------PDGSRVAVKRLKRSSF 306
V T E+ ++ + +G+ RLL DS K G +GI+ G +VAVK +
Sbjct: 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ 83
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
QR++ ++E+ H N+V + + +++ EF+ G L + + L
Sbjct: 84 QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RL 138
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVG----LSKFV 422
+ V + Q +A+LH + V+HRDI++ ++LL + L G +SK V
Sbjct: 139 NEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195
Query: 423 PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
P +R + G Y ++APE + R+ T+ D++S G++++E+
Sbjct: 196 P-----KRKXLVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEM 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 207
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 290 LPDGSRVAVKRLKRS-SFQRKKEFYSEIGRFAR-LHHPNLVAVKGCCYDHGDRYIVYEFV 347
+P G AVKR++ + + Q +K ++ R + P V G + GD +I E +
Sbjct: 56 VPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-L 114
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
+ LD++ + G+++ + K+A ++ + + LH K+ V+HRD++ SNVL++
Sbjct: 115 XDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINA 172
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFV----YRNELTTKSDVYSFGVL 463
G+S ++ +V ++ + G Y APE + + + KSD++S G+
Sbjct: 173 LGQVKXCDFGISGYLVDDVAKD---IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGIT 229
Query: 464 LLEIRLV 470
+E+ ++
Sbjct: 230 XIELAIL 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 249 ALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR----VAVKRLKRS 304
A+ P WK E++R I +F + +LG TG IL + R VA+K + +
Sbjct: 4 AVEGPRWK--QAEDIRDIY-DFRD---VLG---TGAFSEVILAEDKRTQKLVAIKCIAKK 54
Query: 305 SFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRG 362
+ + K+ +EI ++ HPN+VA+ G Y++ + V G L DR + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKG 111
Query: 363 GRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL---LDEEFGAHLMGVGLS 419
+ A R+ + + +LHD +VHRD++ N+L LDE+ + GLS
Sbjct: 112 FYTERDASRL--IFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 420 KFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
K P V+ A GT GY+APE + + + D +S GV+
Sbjct: 167 KMEDPGSVLS----TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 193
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 277 LGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
+G +G Y+ + + G VA++++ +K+ +EI +PN+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+ ++V E++ G L + +D V Q + FLH V+H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 396 RDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
R+I++ N+LL + L G ++ P + +R+ M G Y ++APE V R K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPY-WMAPEVVTRKAYGPK 197
Query: 455 SDVYSFGVLLLEI 467
D++S G++ +E+
Sbjct: 198 VDIWSLGIMAIEM 210
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 144 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 199
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 200 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFY----SEIGRFARLHHPNLVAVKGCCYDHGDR----- 340
L D VAVK L R+ R FY E A L+HP +VAV YD G+
Sbjct: 34 LRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV----YDTGEAETPAG 88
Query: 341 ---YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
YIV E+V L +H G + A+ +V Q + F H ++HRD
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAI--EVIADACQALNFSHQN---GIIHRD 141
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWE---VMQERTVMAGGTYGYLAPEFVYRNELTTK 454
++ +N+++ +M G+++ + V Q V+ GT YL+PE + + +
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI--GTAQYLSPEQARGDSVDAR 199
Query: 455 SDVYSFGVLLLEI 467
SDVYS G +L E+
Sbjct: 200 SDVYSLGCVLYEV 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 292 DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFV 347
DG + K L S K+ SE+ L HPN+V D + YIV E+
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP--HVVHRDIRASNVLL 405
G L + + + LD ++V T L + H + V+HRD++ +NV L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLL 465
D + L GL++ + + +T + GT Y++PE + R KSD++S G LL
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAKTFV--GTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 466 EI 467
E+
Sbjct: 208 EL 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKRS-SFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 207
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFY----SEIGRFARLHHPNLVAVKGCCYDHGDR----- 340
L D VAVK L R+ R FY E A L+HP +VAV YD G+
Sbjct: 34 LRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV----YDTGEAETPAG 88
Query: 341 ---YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
YIV E+V L +H G + A+ +V Q + F H ++HRD
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAI--EVIADACQALNFSHQN---GIIHRD 141
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWE---VMQERTVMAGGTYGYLAPEFVYRNELTTK 454
++ +N+++ +M G+++ + V Q V+ GT YL+PE + + +
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI--GTAQYLSPEQARGDSVDAR 199
Query: 455 SDVYSFGVLLLEI 467
SDVYS G +L E+
Sbjct: 200 SDVYSLGCVLYEV 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL------PDGSRVAVKRLKR-SSFQR 308
K + +L+ + + R LG G Y G + P +VAVK L S Q
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRGGRSLD 367
+ +F E ++ +H N+V G R+I+ E + G L +L PR +
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 368 WAMR--MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
AM + VA +A G +L + H +HRDI A N LL + +G +
Sbjct: 164 LAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RD 219
Query: 426 VMQERTVMAGG----TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + GG ++ PE T+K+D +SFGVLL EI
Sbjct: 220 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 277 LGDSKTGGTYSGILPDGSRVAV-KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + S +A K + S + +++ EI A HPN+V + Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+ +I+ EF G +D + + R L + V + +LHD ++H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-----RNE 450
RD++A N+L + L G+S +Q R G Y ++APE V
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPY-WMAPEVVMCETSKDRP 216
Query: 451 LTTKSDVYSFGVLLLEI 467
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 277 LGDSKTGGTYSGILPDGSRVAV-KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + S +A K + S + +++ EI A HPN+V + Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+ +I+ EF G +D + + R L + V + +LHD ++H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-----RNE 450
RD++A N+L + L G+S +Q R G Y ++APE V
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDXFIGTPY-WMAPEVVMCETSKDRP 216
Query: 451 LTTKSDVYSFGVLLLEI 467
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
A K + S + +++ EI A HPN+V + Y + +I+ EF G +D +
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 416
+ R L + V + +LHD ++HRD++A N+L + L
Sbjct: 99 LEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADF 152
Query: 417 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-----RNELTTKSDVYSFGVLLLEI 467
G+S +Q R G Y ++APE V K+DV+S G+ L+E+
Sbjct: 153 GVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 29/187 (15%)
Query: 296 VAVKRLKRSSFQRKKEFY----SEIGRFARLHHPNLVAVKGCCYDHGDR--------YIV 343
VAVK L R+ R FY E A L+HP +VAV YD G+ YIV
Sbjct: 40 VAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV----YDTGEAETPAGPLPYIV 94
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E+V L +H G + A+ +V Q + F H ++HRD++ +N+
Sbjct: 95 MEYVDGVTLRDIVHT--EGPMTPKRAI--EVIADACQALNFSHQN---GIIHRDVKPANI 147
Query: 404 LLDEEFGAHLMGVGLSKFVPWE---VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
++ +M G+++ + V Q V+ GT YL+PE + + +SDVYS
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVI--GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 461 GVLLLEI 467
G +L E+
Sbjct: 206 GCVLYEV 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 41/205 (20%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC------------------ 333
DG ++R+K ++ + ++E + A+L H N+V GC
Sbjct: 36 DGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESS 91
Query: 334 CYDHGDR-----------YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
YD + +I EF G L++W+ R G LD + +++ + +G+
Sbjct: 92 DYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGEKLDKVLALELFEQITKGV 149
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLA 442
++H K ++HRD++ SN+ L + + GL + + + R + GT Y++
Sbjct: 150 DYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR---SKGTLRYMS 203
Query: 443 PEFVYRNELTTKSDVYSFGVLLLEI 467
PE + + + D+Y+ G++L E+
Sbjct: 204 PEQISSQDYGKEVDLYALGLILAEL 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 277 LGDSKTGGTYSGILPDGSRVAV-KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
LGD G Y + S +A K + S + +++ EI A HPN+V + Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
+ +I+ EF G +D + + R L + V + +LHD ++H
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-----RNE 450
RD++A N+L + L G+S +Q R G Y ++APE V
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPY-WMAPEVVMCETSKDRP 216
Query: 451 LTTKSDVYSFGVLLLEI 467
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRSSFQ 307
PS +LR + + + ++LG G Y GI +P+G V A+K L ++
Sbjct: 22 PSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP 81
Query: 308 RKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH-HIPRGGRS 365
+ EF E A + HP+LV + G C + +V + + +G L ++H H G
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 366 L--DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVP 423
L +W ++ +A+G+ +L ++ +VHRD+ A NVL+ + GL++ +
Sbjct: 141 LLLNWCVQ------IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 191
Query: 424 WEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ + ++A E ++ + T +SDV+S+GV + E+
Sbjct: 192 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 235
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + C D Y + NG L +++ I S D +
Sbjct: 92 SRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 147
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 148 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQL 232
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 4 SSVFVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 54
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 55 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHRD+ A N ++ +F +
Sbjct: 115 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 171
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 172 GDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 277 LGDSKTGGTYSGIL-PDGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G G +SG L D + VAVK + + K +F E + HPN+V + G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
YIV E V G +L + G L +++ A G+ +L K +
Sbjct: 182 TQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD+ A N L+ E+ + G+S+ V + + APE + +++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 455 SDVYSFGVLLLE 466
SDV+SFG+LL E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 1 SSVFVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 51
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 52 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 111
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHRD+ A N ++ +F +
Sbjct: 112 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 168
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 169 GDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTAR 173
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 174 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 234 VLMWEI 239
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 178
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 179 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 239 VLMWEI 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Query: 277 LGDSKTGGTYSGIL-PDGSRVAVKRLKRS-SFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G G +SG L D + VAVK + + K +F E + HPN+V + G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
YIV E V G +L + G L +++ A G+ +L K +
Sbjct: 182 TQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD+ A N L+ E+ + G+S+ V + + APE + +++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 455 SDVYSFGVLLLE 466
SDV+SFG+LL E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFAR----LHHPNLVAVKGCCYDHGDR--------YIV 343
VAVK L R+ R FY R A+ L+HP +VAV YD G+ YIV
Sbjct: 57 VAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV----YDTGEAETPAGPLPYIV 111
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E+V L +H G + A+ +V Q + F H ++HRD++ +N+
Sbjct: 112 MEYVDGVTLRDIVHT--EGPMTPKRAI--EVIADACQALNFSHQN---GIIHRDVKPANI 164
Query: 404 LLDEEFGAHLMGVGLSKFVPWE---VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
++ +M G+++ + V Q V+ GT YL+PE + + +SDVYS
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVI--GTAQYLSPEQARGDSVDARSDVYSL 222
Query: 461 GVLLLEI 467
G +L E+
Sbjct: 223 GCVLYEV 229
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 175
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 176 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 236 VLMWEI 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 232
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 293 VLMWEI 298
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLST 122
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTXXKASKGKL 174
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLST 122
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGKL 174
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 19 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 74
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
H N+V + + ++V EF+ G L + H ++ V + Q +
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQAL 129
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLA 442
+ LH + V+HRDI++ ++LL + L G V EV + + ++ GT ++A
Sbjct: 130 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMA 184
Query: 443 PEFVYRNELTTKSDVYSFGVLLLEI 467
PE + R + D++S G++++E+
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEM 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFY----SEIGRFARLHHPNLVAVKGCCYDHGDR----- 340
L D VAVK L R+ R FY E A L+HP +VAV YD G+
Sbjct: 34 LRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV----YDTGEAETPAG 88
Query: 341 ---YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
YIV E+V L +H G + A+ +V Q + F H ++HRD
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAI--EVIADACQALNFSHQN---GIIHRD 141
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWE---VMQERTVMAGGTYGYLAPEFVYRNELTTK 454
++ +N+L+ ++ G+++ + V Q V+ GT YL+PE + + +
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI--GTAQYLSPEQARGDSVDAR 199
Query: 455 SDVYSFGVLLLEI 467
SDVYS G +L E+
Sbjct: 200 SDVYSLGCVLYEV 212
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 23 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 78
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
H N+V + + ++V EF+ G L + H ++ V + Q +
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQAL 133
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLA 442
+ LH + V+HRDI++ ++LL + L G V EV + + ++ GT ++A
Sbjct: 134 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMA 188
Query: 443 PEFVYRNELTTKSDVYSFGVLLLEI 467
PE + R + D++S G++++E+
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEM 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLST 122
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGKL 174
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 257 VFTTEELRSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSE 315
V + RS NF + +G+ TG + + G VAVK++ QR++ ++E
Sbjct: 23 VVDPGDPRSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 78
Query: 316 IGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVA 375
+ H N+V + + ++V EF+ G L + H ++ V
Sbjct: 79 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVC 133
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ Q ++ LH + V+HRDI++ ++LL + L G V EV + + ++
Sbjct: 134 LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-- 188
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT ++APE + R + D++S G++++E+
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 4 SSVYVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 54
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 55 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHRD+ A N ++ +F +
Sbjct: 115 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 171
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 172 GDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRF 319
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 63 RQFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLS 118
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 119 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGK 170
Query: 438 --YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEI 202
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 295 RVAVKRL---KRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
+VA+K + R + K F E+ ++L H N+V++ + Y+V E++
Sbjct: 38 KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT 97
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
L ++ G S+D A+ + GI HD +VHRDI+ N+L+D
Sbjct: 98 LSEYIE--SHGPLSVDTAINF--TNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTL 150
Query: 412 HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK-SDVYSFGVLLLEI 467
+ G++K + E +T GT Y +PE + E T + +D+YS G++L E+
Sbjct: 151 KIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPEQA-KGEATDECTDIYSIGIVLYEM 205
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 94
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 95 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLST 150
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGKL 202
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 233
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 292 DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFV 347
DG + K L S K+ SE+ L HPN+V D + YIV E+
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP--HVVHRDIRASNVLL 405
G L + + + LD ++V T L + H + V+HRD++ +NV L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLL 465
D + L GL++ + + + + GT Y++PE + R KSD++S G LL
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSFAKAFV--GTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 466 EI 467
E+
Sbjct: 208 EL 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 264 RSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL 322
RS NF + +G+ TG + + G VAVK++ QR++ ++E+
Sbjct: 28 RSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 83
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
H N+V + + ++V EF+ G L + H ++ V + Q +
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQAL 138
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLA 442
+ LH + V+HRDI++ ++LL + L G V EV + + ++ GT ++A
Sbjct: 139 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMA 193
Query: 443 PEFVYRNELTTKSDVYSFGVLLLEI 467
PE + R + D++S G++++E+
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEM 218
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 71
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 72 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLST 127
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 128 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGKL 179
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 13 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 73 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 128
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 129 K---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 181
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 182 GRMHDEKVDLWSLGVLCYEF 201
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 68
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 69 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLST 124
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 125 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGKL 176
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 69
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 70 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLST 125
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGKL 177
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 4 SSVFVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 54
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 55 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHRD+ A N ++ +F +
Sbjct: 115 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 171
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 172 GDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 273 GNRLLGDSKTGGTYSGILP-----DGSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHH 324
G+ +LGD+ GT+ + G +VAVK L R S + EI H
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH 75
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P+++ + D ++V E+V G L +I + GR LD ++ + G+ +
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGEL---FDYICKNGR-LDEKESRRLFQQILSGVDY 131
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + VVHRD++ NVLLD A + GLS + E + G+ Y APE
Sbjct: 132 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSCGSPNYAAPE 185
Query: 445 FVY-RNELTTKSDVYSFGVLL 464
+ R + D++S GV+L
Sbjct: 186 VISGRLYAGPEVDIWSSGVIL 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 11 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 60
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 119
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL AM +++A +A G+A+L+ VHRD+ A N +
Sbjct: 120 ------RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 171 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 227 GVVLWEI 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 4 SSVFVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 54
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 55 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHRD+ A N ++ +F +
Sbjct: 115 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 171
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 172 GDFGMTR----DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 127
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 128 K---RVIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSRRTTLSGTLDYLPPEMIE 180
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 181 GRMHDEKVDLWSLGVLCYEF 200
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 1 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 50
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 51 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 109
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL AM +++A +A G+A+L+ VHRD+ A N +
Sbjct: 110 ------RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 160
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 161 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 216
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 217 GVVLWEI 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRFA 320
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 67 QFDHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLST 122
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT--- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRY-----MEDSTYYKASKGKL 174
Query: 438 -YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 5 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 54
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 55 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 113
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 114 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 164
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 165 VAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 221 GVVLWEI 227
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 14 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 129
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 182
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 183 GRMHDEKVDLWSLGVLCYEF 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 28 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 87
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 88 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 143
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P RT + G T YL PE +
Sbjct: 144 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCG-TLDYLPPEMIE 196
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 197 GRMHDEKVDLWSLGVLCYEF 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + + + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 14 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 129
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 182
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 183 GRMHDEKVDLWSLGVLCYEF 202
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 16 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 131
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 184
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 185 GRMHDEKVDLWSLGVLCYEF 204
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 257 VFTTEELRSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSE 315
V + RS NF + +G+ TG + + G VAVK++ QR++ ++E
Sbjct: 66 VVDPGDPRSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 121
Query: 316 IGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVA 375
+ H N+V + + ++V EF+ G L + H ++ V
Sbjct: 122 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVC 176
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ Q ++ LH + V+HRDI++ ++LL + L G V EV + + ++
Sbjct: 177 LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-- 231
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT ++APE + R + D++S G++++E+
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 16 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + + L + + D T LA +++ H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHS 131
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P RT + G T YL PE +
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCG-TLDYLPPEMIE 184
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 185 GRMHDEKVDLWSLGVLCYEF 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 268 KNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLH 323
++F G R LG K G Y + A+K L ++ ++ + + E+ + L
Sbjct: 12 EDFDIG-RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ + G +D Y++ E+ G + R L + R D T LA ++
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALS 126
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAP 443
+ H K V+HRDI+ N+LL + G S P RT + GT YL P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLC-GTLDYLPP 179
Query: 444 EFVYRNELTTKSDVYSFGVLLLEI 467
E + K D++S GVL E
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ E+ G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + + T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 262 ELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRSSFQRKK-EFYSE 315
+LR + + + ++LG G Y GI +P+G V A+K L ++ + EF E
Sbjct: 8 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 67
Query: 316 IGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH-HIPRGGRSL--DWAMRM 372
A + HP+LV + G C + +V + + +G L ++H H G L +W ++
Sbjct: 68 ALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ- 125
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+A+G+ +L ++ +VHRD+ A NVL+ + GL++ + + +
Sbjct: 126 -----IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E ++ + T +SDV+S+GV + E+
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWEL 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 16 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + + L + + D T LA +++ H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANALSYCHS 131
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLXGTLDYLPPEMIE 184
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 185 GRMHDEKVDLWSLGVLCYEF 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 14 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 129
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYLPPEMIE 182
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 183 GRMHDEKVDLWSLGVLCYEF 202
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---KVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 2 AADVFVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 51
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 52 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 110
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 111 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 161
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 162 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 217
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 218 GVVLWEI 224
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 297 AVKRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-D 353
A+K ++++S + E+ L HPN++ + D + Y+V E G L D
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 354 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
+H + +D A+ +K + G+ +LH K ++VHRD++ N+LL+ + L
Sbjct: 126 EIIHRMKFN--EVDAAVIIKQVLS---GVTYLH---KHNIVHRDLKPENLLLESKEKDAL 177
Query: 414 MGV---GLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLL 465
+ + GLS F + M+ER GT Y+APE V R + K DV+S GV+L
Sbjct: 178 IKIVDFGLSAVFENQKKMKERL----GTAYYIAPE-VLRKKYDEKCDVWSIGVILF 228
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 16 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 131
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P RT + G T YL PE +
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCG-TLDYLPPEXIE 184
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 185 GRXHDEKVDLWSLGVLCYEF 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 13 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 73 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 128
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 129 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYLPPEMIE 181
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 182 GRMHDEKVDLWSLGVLCYEF 201
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 37 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 97 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 152
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P RT + G T YL PE +
Sbjct: 153 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCG-TLDYLPPEMIE 205
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 206 GRMHDEKVDLWSLGVLCYEF 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 21/226 (9%)
Query: 243 SNPAASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSR-VAVKRL 301
+ P ++LVP W + R +F E LG T Y + A+K L
Sbjct: 30 AAPGTASLVPDYWIDGSN---RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
Query: 302 KRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIP 360
K++ KK +EIG RL HPN++ +K + +V E V G L DR +
Sbjct: 87 KKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY 144
Query: 361 RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL---DEEFGAHLMGVG 417
R A++ + + +A+LH+ +VHRD++ N+L + + G
Sbjct: 145 YSERDAADAVKQ-----ILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFG 196
Query: 418 LSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
LSK V +V+ +TV GT GY APE + + D++S G++
Sbjct: 197 LSKIVEHQVLM-KTVC--GTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTELCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 14 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 129
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 182
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 183 GRMHDEKVDLWSLGVLCYEF 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 10 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 69
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 70 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 125
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 126 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIE 178
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 179 GRMHDEKVDLWSLGVLCYEF 198
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 127
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 128 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIE 180
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 181 GRMHDEKVDLWSLGVLCYEF 200
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 15 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 130
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P RT + G T YL PE +
Sbjct: 131 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCG-TLDYLPPEMIE 183
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 184 GRMHDEKVDLWSLGVLCYEF 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTXLCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 293 GSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
G VA+K+ S + KK EI +L H NLV + C Y+V+EFV +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
LD L P G LD+ + K + GI F H +++HRDI+ N+L+ +
Sbjct: 110 ILDD-LELFPNG---LDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGV 162
Query: 411 AHLMGVGLSKFV--PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
L G ++ + P EV + T Y APE + + K+ DV++ G L+ E+
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDEV----ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 16 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 76 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 131
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 132 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIE 184
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 185 GRMHDEKVDLWSLGVLCYEF 204
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 42/220 (19%)
Query: 277 LGDSKTGGTYSGIL------PDGSRVAVKRLK-RSSFQRKKEFYSEIGRFARLHHPNLVA 329
LG+ + G Y G L VA+K LK ++ ++EF E ARL HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWL----HHIPRGGRSLDWAMR--------MKVATT 377
+ G +++ + +G L +L H G D ++ + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 437
+A G+ +L HVVH+D+ NVL+ ++ + +GL R V A
Sbjct: 154 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF----------REVYAADY 200
Query: 438 YG----------YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y ++APE + + + SD++S+GV+L E+
Sbjct: 201 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSR---VAVKRLKRSSFQR---KKEFYSEIGRFARLHHP 325
E R LG K G Y + + R +A+K L ++ ++ + + E+ + L HP
Sbjct: 8 EIGRPLGKGKFGNVY--LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 326 NLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
N++ + G +D Y++ E+ G + R L + + D T LA +++
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYC 121
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
H K V+HRDI+ N+LL + G S P R GT YL PE
Sbjct: 122 HSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEM 174
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ K D++S GVL E
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEF 196
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 257 VFTTEELRSITKNFSEGNRLLGDSKTGGT-YSGILPDGSRVAVKRLKRSSFQRKKEFYSE 315
V + RS NF + +G+ TG + + G VAVK++ QR++ ++E
Sbjct: 143 VVDPGDPRSYLDNFIK----IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 198
Query: 316 IGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVA 375
+ H N+V + + ++V EF+ G L + H ++ V
Sbjct: 199 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIAAVC 253
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ Q ++ LH + V+HRDI++ ++LL + L G V EV + + ++
Sbjct: 254 LAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-- 308
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT ++APE + R + D++S G++++E+
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 4 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 53
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 54 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 112
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 113 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 163
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 164 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 220 GVVLWEI 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 5 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 54
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 55 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 113
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 114 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 164
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 165 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 221 GVVLWEI 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 72 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 127
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 128 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDTLCGTLDYLPPEMIE 180
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 181 GRMHDEKVDLWSLGVLCYEF 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 14 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 129
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYLPPEMIE 182
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 183 GRMHDEKVDLWSLGVLCYEF 202
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 11 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 60
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 119
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 120 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 171 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 227 GVVLWEI 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V + IT + R LG G Y G+ P+ +RVA+
Sbjct: 33 AADVYVPDEWEVAREK----ITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 82
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 83 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 141
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 142 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 192
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 193 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 249 GVVLWEI 255
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 246 AASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGIL-------PDGSRVAV 298
AA VP W+V IT + R LG G Y G+ P+ +RVA+
Sbjct: 4 AADVYVPDEWEVAR----EKITMS-----RELGQGSFGMVYEGVAKGVVKDEPE-TRVAI 53
Query: 299 KRLKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
K + ++ R++ EF +E + ++V + G ++ E + G L +L
Sbjct: 54 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL- 112
Query: 358 HIPRGGRSLDWAMR-------------MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
RSL M +++A +A G+A+L+ VHRD+ A N +
Sbjct: 113 ------RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 163
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSF 460
+ E+F + G+++ ++ + GG +++PE + TT SDV+SF
Sbjct: 164 VAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 461 GVLLLEI 467
GV+L EI
Sbjct: 220 GVVLWEI 226
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 8/182 (4%)
Query: 292 DGSRVAVKRLKRSSF--QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFV 347
DG + K L S K+ SE+ L HPN+V D + YIV E+
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP--HVVHRDIRASNVLL 405
G L + + + LD ++V T L + H + V+HRD++ +NV L
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLL 465
D + L GL++ + + + + GT Y++PE + R KSD++S G LL
Sbjct: 150 DGKQNVKLGDFGLARILNHDEDFAKEFV--GTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 466 EI 467
E+
Sbjct: 208 EL 209
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 42/220 (19%)
Query: 277 LGDSKTGGTYSGIL------PDGSRVAVKRLK-RSSFQRKKEFYSEIGRFARLHHPNLVA 329
LG+ + G Y G L VA+K LK ++ ++EF E ARL HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWL----HHIPRGGRSLDWAMR--------MKVATT 377
+ G +++ + +G L +L H G D ++ + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 437
+A G+ +L HVVH+D+ NVL+ ++ + +GL R V A
Sbjct: 137 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF----------REVYAADY 183
Query: 438 YG----------YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y ++APE + + + SD++S+GV+L E+
Sbjct: 184 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 11 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 71 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 126
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 127 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYLPPEMIE 179
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 180 GRMHDEKVDLWSLGVLCYEF 199
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 268 KNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLH 323
++F G R LG K G Y + A+K L ++ ++ + + E+ + L
Sbjct: 12 EDFDIG-RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ + G +D Y++ E+ G + R L + R D T LA ++
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALS 126
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAP 443
+ H K V+HRDI+ N+LL + G S P R GT YL P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRDTLCGTLDYLPP 179
Query: 444 EFVYRNELTTKSDVYSFGVLLLEI 467
E + K D++S GVL E
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 284 GTYSGILPDGSRV-----AVKRLKRSSFQRKKE--FYSEIGRFARLHHPNLVAVKGCCYD 336
G++ +L R+ AVK + ++S + K E+ +L HPN++ + D
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED 92
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E G L + I R S A R + + GI ++H K ++VHR
Sbjct: 93 SSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAAR--IIKQVFSGITYMH---KHNIVHR 145
Query: 397 DIRASNVLL---DEEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
D++ N+LL +++ ++ GLS F M++R GT Y+APE V R
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI----GTAYYIAPE-VLRGTYD 200
Query: 453 TKSDVYSFGVLL 464
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 296 VAVKRLKRSSFQRKKEFY----SEIGRFARLHHPNLVAVKGCCYDHGDR--------YIV 343
VAVK L R+ R FY E A L+HP +VAV Y G+ YIV
Sbjct: 40 VAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV----YATGEAETPAGPLPYIV 94
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E+V L +H G + A+ +V Q + F H ++HRD++ +N+
Sbjct: 95 MEYVDGVTLRDIVHT--EGPMTPKRAI--EVIADACQALNFSHQN---GIIHRDVKPANI 147
Query: 404 LLDEEFGAHLMGVGLSKFVPWE---VMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
++ +M G+++ + V Q V+ GT YL+PE + + +SDVYS
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVI--GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 461 GVLLLEI 467
G +L E+
Sbjct: 206 GCVLYEV 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 122
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S + E+ E GT Y++PE
Sbjct: 123 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV----GTRSYMSPE 176
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEM 199
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ + G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRF 319
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 446 RQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLS 501
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 502 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY-----MEDSTYYKASKGK 553
Query: 438 --YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 142
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQL 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 117
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 118 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQL 202
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 272 EGNRLLGDSKTG----GTYSGILPDGS--RVAVKRLKRSSFQRKKE-FYSEIGRFARL-H 323
E ++LG G T GI G +VAVK LK + ++E SE+ +L
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPR----------GGRSLDWAMRMK 373
H N+V + G C G Y+++E+ G L +L + L+ +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 374 VAT---------TLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 424
V T +A+G+ FL K VHRD+ A NVL+ + GL++
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLAR---- 220
Query: 425 EVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++M + + G ++APE ++ T KSDV+S+G+LL EI
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 118
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 119 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQL 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 28/183 (15%)
Query: 303 RSSFQRKKEFYSEIGRFARLHHPNLV----AVKGCCYDHGDRYIVYEFVVNGPLDRWLHH 358
+ S+Q ++E +S G + H NL+ A K + +++ F G L +L
Sbjct: 51 KQSWQSEREIFSTPG----MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK- 105
Query: 359 IPRGGRSLDWAMRMKVATTLAQGIAFLHDKV--------KPHVVHRDIRASNVLLDEEFG 410
G + W VA T+++G+++LH+ V KP + HRD ++ NVLL +
Sbjct: 106 ----GNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT 161
Query: 411 AHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLAPEFV-----YRNELTTKSDVYSFGVLL 464
A L GL+ +F P + + T GT Y+APE + ++ + + D+Y+ G++L
Sbjct: 162 AVLADFGLAVRFEPGKPPGD-THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 220
Query: 465 LEI 467
E+
Sbjct: 221 WEL 223
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 119
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 120 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQL 204
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSE--IGRFARLHHPNL----VA 329
L+G + G Y G L D VAVK SF ++ F +E I R + H N+ V
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 330 VKGCCYDHGDRYI-VYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH-- 386
+ D Y+ V E+ NG L ++L + DW ++A ++ +G+A+LH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTE 130
Query: 387 ----DKVKPHVVHRDIRASNVLLDE-------EFGAHLMGVGLSKFVPWEVMQERTVMAG 435
D KP + HRD+ + NVL+ +FG + G P E +
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE-EDNAAISEV 189
Query: 436 GTYGYLAPEFV-----YRNELTT--KSDVYSFGVLLLEI 467
GT Y+APE + R+ + + D+Y+ G++ EI
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 120
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 121 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQL 205
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSR-VAVKRLKRSSFQRK---KEFYSEIGRF 319
R T + E R LG K G Y VA+K L +S +++ + EI
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
A LHHPN++ + YD Y++ E+ G L + L + + D + LA
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELA 133
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ + H K V+HRDI+ N+LL + + G S P ++ +T+ GT
Sbjct: 134 DALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAP--SLRRKTMC--GTLD 186
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
YL PE + K D++ GVL E+
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYEL 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 140
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 140
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 140
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 284 GTYSGILPDGSRV-----AVKRLKRSSFQRKKE--FYSEIGRFARLHHPNLVAVKGCCYD 336
G++ +L R+ AVK + ++S + K E+ +L HPN++ + D
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED 92
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E G L + I R S A R + + GI ++H K ++VHR
Sbjct: 93 SSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAAR--IIKQVFSGITYMH---KHNIVHR 145
Query: 397 DIRASNVLL---DEEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
D++ N+LL +++ ++ GLS F M++R GT Y+APE V R
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI----GTAYYIAPE-VLRGTYD 200
Query: 453 TKSDVYSFGVLL 464
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 142
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 140
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 141 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 291 PD-GSRVAVKRLKRSSFQRKKEFYSEIGR--FARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
PD G A+K LK+++ + + +++ R A ++HP +V + G Y++ +F+
Sbjct: 53 PDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFL 112
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
G L + + + ++ +A LA G+ LH +++RD++ N+LLDE
Sbjct: 113 RGGDL---FTRLSKEVMFTEEDVKFYLAE-LALGLDHLHSL---GIIYRDLKPENILLDE 165
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG-GTYGYLAPEFVYRNELTTKSDVYSFGVLLLE 466
E L GLSK + E+ + GT Y+APE V R + +D +S+GVL+ E
Sbjct: 166 EGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFE 222
Query: 467 I 467
+
Sbjct: 223 M 223
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 69 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 124
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 125 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQL 209
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 142
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 284 GTYSGILPDGSRV-----AVKRLKRSSFQRKKE--FYSEIGRFARLHHPNLVAVKGCCYD 336
G++ +L R+ AVK + ++S + K E+ +L HPN++ + D
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED 92
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
YIV E G L + I R S A R + + GI ++H K ++VHR
Sbjct: 93 SSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAAR--IIKQVFSGITYMH---KHNIVHR 145
Query: 397 DIRASNVLL---DEEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
D++ N+LL +++ ++ GLS F M++R GT Y+APE V R
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI----GTAYYIAPE-VLRGTYD 200
Query: 453 TKSDVYSFGVLL 464
K DV+S GV+L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 142
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 143
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 144 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 139
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 140 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQL 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK + ++ + SE+ + H N++ + G C G Y++ + G L
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 354 RWLH-HIPRG-------GRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRAS 401
+L P G R + M K + LA+G+ +L + +HRD+ A
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
NVL+ E + GL++ + ++T ++APE ++ T +SDV+SFG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 462 VLLLEI 467
VL+ EI
Sbjct: 247 VLMWEI 252
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 90 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 145
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 146 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQL 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 142
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 4 SSVYVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 54
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 55 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 114
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHR++ A N ++ +F +
Sbjct: 115 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKI 171
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 172 GDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 265 SITKNFSEGNRLLGDSKTGGTYSGIL--PDGSR--VAVKRLKR-SSFQRKKEFYSEIGRF 319
I + E R +G+ + G + GI P+ VA+K K +S +++F E
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+ HP++V + G ++ +I+ E G L +L SLD A + A L+
Sbjct: 446 RQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLS 501
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT-- 437
+A+L K VHRDI A NVL+ L GLS++ M++ T
Sbjct: 502 TALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRY-----MEDSTYYKASKGK 553
Query: 438 --YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + T+ SDV+ FGV + EI
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI----GSFDETCTRFYTAEIV 142
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 143 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + + SD+++ G ++ ++
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQL 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 40/219 (18%)
Query: 274 NRLLGDSKTGGTYSGIL-------PDGSRVAVKRLKRSSFQRKK-EFYSEIGRFARLHHP 325
+R LG G Y G+ P+ +RVA+K + ++ R++ EF +E +
Sbjct: 15 SRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 326 NLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMR-------------M 372
++V + G ++ E + G L +L RSL M +
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-------RSLRPEMENNPVLAPPSLSKMI 126
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
++A +A G+A+L+ VHRD+ A N ++ E+F + G+++ ++ +
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXX 179
Query: 433 MAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GG +++PE + TT SDV+SFGV+L EI
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 37 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 97 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 152
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 153 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCGTLDYLPPEMIE 205
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 206 GRMHDEKVDLWSLGVLCYEF 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 275 RLLGDSKTGGTYSGILPD------GSRVAVKRLKRSSFQRKK-EFYSEIGRFARLHHPNL 327
R LG G Y G D +RVAVK + S+ R++ EF +E ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI-PRG----GRSLDWAMRM-KVATTLAQG 381
V + G +V E + +G L +L + P GR M ++A +A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT---- 437
+A+L+ K VHRD+ A N ++ +F + G+++ ++ + GG
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 194
Query: 438 YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE + TT SD++SFGV+L EI
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 247 ASALVPPSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPD------GSRVAVKR 300
+S VP W+V + E++ + R LG G Y G D +RVAVK
Sbjct: 5 SSVYVPDEWEV-SREKITLL--------RELGQGSFGMVYEGNARDIIKGEAETRVAVKT 55
Query: 301 LKRSSFQRKK-EFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHI 359
+ S+ R++ EF +E ++V + G +V E + +G L +L +
Sbjct: 56 VNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 115
Query: 360 -PRG----GRSLDWAMRM-KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
P GR M ++A +A G+A+L+ K VHR++ A N ++ +F +
Sbjct: 116 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKI 172
Query: 414 MGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G+++ ++ + GG ++APE + TT SD++SFGV+L EI
Sbjct: 173 GDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 143
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 144 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 275 RLLGDSKTGGTY-SGILPDGSRVAVKRLKRSSFQRKKEFY-----SEIGRFARLHHPNLV 328
R+LG G + + G AVK LK+ + + I AR +HP L
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLT 87
Query: 329 AVKGCCYDHGDR-YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ CC+ DR + V EFV G L + HI + R D A A + + FLHD
Sbjct: 88 QL-FCCFQTPDRLFFVMEFVNGGDL---MFHIQKS-RRFDEARARFYAAEIISALMFLHD 142
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEF 445
K +++RD++ NVLLD E L G+ K E + A GT Y+APE
Sbjct: 143 K---GIIYRDLKLDNVLLDHEGHCKLADFGMCK----EGICNGVTTATFCGTPDYIAPEI 195
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ D ++ GVLL E+
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEM 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+RL HP V + D Y + NG L +++ I S D +
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIV 139
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ +LH K ++HRD++ N+LL+E+ + G +K + E Q R GT
Sbjct: 140 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y++PE + SD+++ G ++ ++
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQL 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 268 KNFSEGNRLLGDSKTGGTYSG-ILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLH 323
++F GN LLG G Y + G VA+K + + + + + +E+ +L
Sbjct: 11 EDFKVGN-LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP+++ + D Y+V E NG ++R+L + + + M T G+
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT---GML 126
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAP 443
+LH ++HRD+ SN+LL + GL+ ++ E+ GT Y++P
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA--TQLKMPHEKHYTLCGTPNYISP 181
Query: 444 EFVYRNELTTKSDVYSFGVLL 464
E R+ +SDV+S G +
Sbjct: 182 EIATRSAHGLESDVWSLGCMF 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQR---KKEFYSEIGRFARLHHPNL 327
E R LG K G Y + A+K L ++ ++ + + E+ + L HPN+
Sbjct: 14 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 328 VAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
+ + G +D Y++ E+ G + R L + + D T LA +++ H
Sbjct: 74 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHS 129
Query: 388 KVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
K V+HRDI+ N+LL + G S P R GT YL PE +
Sbjct: 130 K---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCGTLDYLPPEMIE 182
Query: 448 RNELTTKSDVYSFGVLLLEI 467
K D++S GVL E
Sbjct: 183 GRMHDEKVDLWSLGVLCYEF 202
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 293 GSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G+ A+K +K+SS E+ +L HPN++ + D + Y+V E
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 88
Query: 350 GPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L D + + + +D A+ MK + G +LH K ++VHRD++ N+LL+ +
Sbjct: 89 GELFDEII--LRQKFSEVDAAVIMKQVLS---GTTYLH---KHNIVHRDLKPENLLLESK 140
Query: 409 FGAHLMGV---GLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
L+ + GLS F M+ER GT Y+APE V R + K DV+S GV+L
Sbjct: 141 SRDALIKIVDFGLSAHFEVGGKMKERL----GTAYYIAPE-VLRKKYDEKCDVWSCGVIL 195
Query: 465 LEIRLVLC 472
++LC
Sbjct: 196 Y---ILLC 200
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 17/223 (7%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSF 306
PS + LR + + + ++LG G Y G+ +P+G +V A+K L+ +S
Sbjct: 3 PSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 62
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS- 365
+ KE E A + +P++ + G C + I+ LD H G
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 366 -LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 424
L+W ++ +A+G+ +L D+ +VHRD+ A NVL+ + GL+K +
Sbjct: 123 LLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
Query: 425 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
E + ++A E + T +SDV+S+GV + E+
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 44/199 (22%)
Query: 296 VAVKRL---KRSSFQRKKEFYSEIGRFARLHHPNLVAV-----KGCCYDHGDRYIVYEFV 347
VAVK + S+Q + E YS G + H N++ +G D D +++ F
Sbjct: 50 VAVKIFPIQDKQSWQNEYEVYSLPG----MKHENILQFIGAEKRGTSVD-VDLWLITAFH 104
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-------KPHVVHRDIRA 400
G L +L + W +A T+A+G+A+LH+ + KP + HRDI++
Sbjct: 105 EKGSLSDFLK-----ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159
Query: 401 SNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTVMAGGTYG------YLAPEFV-----YR 448
NVLL A + GL+ KF E AG T+G Y+APE + ++
Sbjct: 160 KNVLLKNNLTACIADFGLALKF-------EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQ 212
Query: 449 NELTTKSDVYSFGVLLLEI 467
+ + D+Y+ G++L E+
Sbjct: 213 RDAFLRIDMYAMGLVLWEL 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ--- 126
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 127 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 126 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGR--FARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
A+K LK+++ + + +++ R ++HP +V + G Y++ +F+ G L
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-- 113
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+ + + ++ +A LA + LH +++RD++ N+LLDEE L
Sbjct: 114 -FTRLSKEVMFTEEDVKFYLAE-LALALDHLHSL---GIIYRDLKPENILLDEEGHIKLT 168
Query: 415 GVGLSKFVPWEVMQERTVMAG-GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GLSK + E+ + GT Y+APE V R T +D +SFGVL+ E+
Sbjct: 169 DFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGR--FARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
A+K LK+++ + + +++ R ++HP +V + G Y++ +F+ G L
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-- 113
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+ + + ++ +A LA + LH +++RD++ N+LLDEE L
Sbjct: 114 -FTRLSKEVMFTEEDVKFYLAE-LALALDHLHSL---GIIYRDLKPENILLDEEGHIKLT 168
Query: 415 GVGLSKFVPWEVMQERTVMAG-GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GLSK + E+ + GT Y+APE V R T +D +SFGVL+ E+
Sbjct: 169 DFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 110
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 111 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 163
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 164 DENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 293 GSRVAVKRLKRSSF---QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G+ A+K +K+SS E+ +L HPN++ + D + Y+V E
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 350 GPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L D + + + +D A+ MK + G +LH K ++VHRD++ N+LL+ +
Sbjct: 106 GELFDEII--LRQKFSEVDAAVIMK---QVLSGTTYLH---KHNIVHRDLKPENLLLESK 157
Query: 409 FGAHLMGV---GLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
L+ + GLS F M+ER GT Y+APE V R + K DV+S GV+L
Sbjct: 158 SRDALIKIVDFGLSAHFEVGGKMKERL----GTAYYIAPE-VLRKKYDEKCDVWSCGVIL 212
Query: 465 LEIRLVLC 472
++LC
Sbjct: 213 Y---ILLC 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGR--FARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
A+K LK+++ + + +++ R ++HP +V + G Y++ +F+ G L
Sbjct: 57 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL-- 114
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+ + + ++ +A LA + LH +++RD++ N+LLDEE L
Sbjct: 115 -FTRLSKEVMFTEEDVKFYLAE-LALALDHLHSL---GIIYRDLKPENILLDEEGHIKLT 169
Query: 415 GVGLSKFVPWEVMQERTVMAG-GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GLSK + E+ + GT Y+APE V R T +D +SFGVL+ E+
Sbjct: 170 DFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 106
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 107 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 159
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 13 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 72 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + +N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 185 PYSFQSDVYAFGIVLYEL 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L R + + KV+ + +G+A+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGLAY 129
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K + ++HRD++ SN+L++ L G+S +++ GT Y+APE
Sbjct: 130 LREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPE 183
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVEL 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 13 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 333 CCYDHGDRY-IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP 391
Y + IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 72 --YSTAPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 392 HVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---R 448
++HRD++++N+ L E+ + GL+ + G+ ++APE + +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 449 NELTTKSDVYSFGVLLLEI 467
N + +SDVY+FG++L E+
Sbjct: 184 NPYSFQSDVYAFGIVLYEL 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G A+K +K+S R +EI ++ H N+V ++ Y+V + V G L
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 353 -DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL-LDEEFG 410
DR L RG + A V + + +LH+ +VHRD++ N+L L E
Sbjct: 94 FDRILE---RGVYTEKDASL--VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEEN 145
Query: 411 AHLM--GVGLSKFVPWEVMQERTVM--AGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
+ +M GLSK M++ +M A GT GY+APE + + + D +S GV+
Sbjct: 146 SKIMITDFGLSK------MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 15 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 74 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 126
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + +N
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 187 PYSFQSDVYAFGIVLYEL 204
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 126
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 127 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 116
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 117 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 169
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 104
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 105 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 157
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 158 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 110
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 111 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 163
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 164 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRK 309
++ ELR + ++LG G Y GI +PDG V A+K L+ +S +
Sbjct: 12 RILKETELRKV--------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN 63
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LD 367
KE E A + P + + G C + + LD + R G L+
Sbjct: 64 KEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLN 123
Query: 368 WAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 427
W M+ +A+G+++L D +VHRD+ A NVL+ + GL++ + +
Sbjct: 124 WCMQ------IAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 428 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ ++A E + R T +SDV+S+GV + E+
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWEL 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 124
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 125 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 177
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 126 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 127
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 128 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 126
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 127 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 179
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 126
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 127 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 179
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 126 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 128
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 129 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 40/219 (18%)
Query: 274 NRLLGDSKTGGTYSGIL-------PDGSRVAVKRLKRSSFQRKK-EFYSEIGRFARLHHP 325
+R LG G Y G+ P+ +RVA+K + ++ R++ EF +E +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 326 NLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMR-------------M 372
++V + G ++ E + G L +L RSL M +
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-------RSLRPEMENNPVLAPPSLSKMI 128
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
++A +A G+A+L+ VHRD+ A N ++ E+F + G+++ ++ +
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYY 181
Query: 433 MAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GG +++PE + TT SDV+SFGV+L EI
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 3 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 119
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 120 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 6 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 65
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 122
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 123 ---IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 18 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 77 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + +N
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 190 PYSFQSDVYAFGIVLYEL 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-----LPDGSRVAVKRLKRSSFQR-KKE 311
FT E+L K+ E R G Y + P G +AVKR++ + ++ +K+
Sbjct: 19 FTAEDL----KDLGEIGR--------GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ 66
Query: 312 FYSEIGRFARLHH-PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAM 370
++ R P +V G + GD +I E + D++ ++ LD +
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTS-FDKFYKYV---YSVLDDVI 122
Query: 371 RMKV--ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
++ TLA A H K ++HRDI+ SN+LLD L G+S + + +
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182
Query: 429 ERTVMAGGTYGYLAPEFV----YRNELTTKSDVYSFGVLLLEI 467
R G Y+APE + R +SDV+S G+ L E+
Sbjct: 183 TRD---AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 18 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 77 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + +N
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 190 PYSFQSDVYAFGIVLYEL 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 334 CYDHGDR-YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
C+ DR Y V E+V G L ++HI + GR + A +A G+ FL K
Sbjct: 410 CFQTMDRLYFVMEYVNGGDL---MYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSK---G 462
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
+++RD++ NV+LD E + G+ K W+ + + GT Y+APE +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIAYQPYG 520
Query: 453 TKSDVYSFGVLLLEI 467
D ++FGVLL E+
Sbjct: 521 KSVDWWAFGVLLYEM 535
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 128
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 129 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 127
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 128 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 19 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 78
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 135
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 136 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 126 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 128
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 129 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 353 DRWL-----HHIPRGGRSLDWAMR---MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+L +P D+ + + +A+G+ FL + +HRD+ A N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNIL 176
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
L E+ + GL++ + + R A ++APE ++ T +SDV+SFGVLL
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 465 LEI 467
EI
Sbjct: 237 WEI 239
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGR-IPEQILGKVSIAVIKGLTY 181
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 182 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 235
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEM 258
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 13 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 72 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVY---R 448
++HRD++++N+ L E+ + GL ++ W + ++G ++APE + +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDK 183
Query: 449 NELTTKSDVYSFGVLLLEI 467
N + +SDVY+FG++L E+
Sbjct: 184 NPYSFQSDVYAFGIVLYEL 202
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKV---ATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+L +P D+ + + +A+G+ FL + +HRD+ A N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNIL 176
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
L E+ + GL++ + + R A ++APE ++ T +SDV+SFGVLL
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 465 LEI 467
EI
Sbjct: 237 WEI 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 15 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 74
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 131
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 132 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 119
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 173
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 128
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 129 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 353 DRWL-----HHIPRGGRSL-----DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASN 402
+L +P L + + +A+G+ FL + +HRD+ A N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARN 178
Query: 403 VLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+LL E+ + GL++ + + R A ++APE ++ T +SDV+SFGV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 463 LLLEI 467
LL EI
Sbjct: 239 LLWEI 243
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 119
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 173
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 119
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 173
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 132
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 133 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 275 RLLGDSKTGGTY-SGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV 330
R +G G Y + + + VA+K++ S Q ++ E+ +L HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVK 390
+GC ++V E+ + D H + L V QG+A+LH
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSH-- 173
Query: 391 PHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY--- 447
+++HRD++A N+LL E G V L F +M G Y ++APE +
Sbjct: 174 -NMIHRDVKAGNILLSEP-GL----VKLGDFGSASIMAPANXFVGTPY-WMAPEVILAMD 226
Query: 448 RNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLL 488
+ K DV+S G+ +E L R L+ + ++MS L
Sbjct: 227 EGQYDGKVDVWSLGITCIE----LAERKPPLFNM-NAMSAL 262
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 34 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 93
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 150
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 151 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 237
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 138
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 139 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 192
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEM 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 275 RLLGDSKTGGTY-SGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV 330
R +G G Y + + + VA+K++ S Q ++ E+ +L HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVK 390
+GC ++V E+ + D H + L V QG+A+LH
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSH-- 134
Query: 391 PHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY--- 447
+++HRD++A N+LL E G V L F +M G Y ++APE +
Sbjct: 135 -NMIHRDVKAGNILLSEP-GL----VKLGDFGSASIMAPANXFVGTPY-WMAPEVILAMD 187
Query: 448 RNELTTKSDVYSFGVLLLEI 467
+ K DV+S G+ +E+
Sbjct: 188 EGQYDGKVDVWSLGITCIEL 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 468
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 469 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 521
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 119
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 173
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 119
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 173
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P +V G Y G+ I E + G LD+ L + GR + + KV+ + +G+ +
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILG-KVSIAVIKGLTY 146
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
L +K K ++HRD++ SN+L++ L G+S +++ GT Y++PE
Sbjct: 147 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPE 200
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
+ + +SD++S G+ L+E+
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEM 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 273 GNRL-LGDSKTGGTYSG-ILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
G+R+ LG G Y+G L + R+A+K + + + + EI L H N+V
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT-TLAQGIAFLHDKV 389
G ++G I E V G L L + G D + T + +G+ +LHD
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRS--KWGPLKDNEQTIGFYTKQILEGLKYLHDN- 141
Query: 390 KPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+VHRDI+ NVL++ G + G SK + + T GT Y+APE + +
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDK 197
Query: 449 NE--LTTKSDVYSFGVLLLEI 467
+D++S G ++E+
Sbjct: 198 GPRGYGKAADIWSLGCTIIEM 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
K E +E +L +P +V + G C + +V E GPL+++L R +
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ----NRHVKD 469
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQ 428
+++ ++ G+ +L + + VHRD+ A NVLL + A + GLSK +
Sbjct: 470 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK----ALRA 522
Query: 429 ERTVMAGGTYG-----YLAPEFVYRNELTTKSDVYSFGVLLLE 466
+ T+G + APE + + ++KSDV+SFGVL+ E
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 15/220 (6%)
Query: 252 PPSWKVFTTEELRSITKNFSEGNRLL---GDSKTGGTYSGILPD-GSRVAVKRLKRSSFQ 307
PP ++ +E S+TK E +L G+ G Y I + G VA+K++ S
Sbjct: 10 PPRRQLKKLDE-DSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-- 66
Query: 308 RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLD 367
+E EI + P++V G + + D +IV E+ G + + ++L
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR---LRNKTLT 123
Query: 368 WAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM 427
+ + +G+ +LH K +HRDI+A N+LL+ E A L G++ + + M
Sbjct: 124 EDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXM 179
Query: 428 QERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+R + G + ++APE + +D++S G+ +E+
Sbjct: 180 AKRNXVIGTPF-WMAPEVIQEIGYNCVADIWSLGITAIEM 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 40 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 99 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 151
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + +N
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 212 PYSFQSDVYAFGIVLYEL 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 33 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 92 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 144
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVY---R 448
++HRD++++N+ L E+ + GL ++ W + ++G ++APE + +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDK 203
Query: 449 NELTTKSDVYSFGVLLLEI 467
N + +SDVY+FG++L E+
Sbjct: 204 NPYSFQSDVYAFGIVLYEL 222
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 41 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 100 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + +N
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 213 PYSFQSDVYAFGIVLYEL 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 334 CYDHGDR-YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
C+ DR Y V E+V G L ++HI + GR + A +A G+ FL K
Sbjct: 89 CFQTMDRLYFVMEYVNGGDL---MYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQSK---G 141
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELT 452
+++RD++ NV+LD E + G+ K W+ + + GT Y+APE +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIAYQPYG 199
Query: 453 TKSDVYSFGVLLLEI 467
D ++FGVLL E+
Sbjct: 200 KSVDWWAFGVLLYEM 214
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 274 NRLLGDSKTGGTYSGIL-------PDGSRVAVKRLKRSSFQRKK-EFYSEIGRFARLHHP 325
+R LG G Y G+ P+ +RVA+K + ++ R++ EF +E +
Sbjct: 17 SRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 326 NLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMR-------------M 372
++V + G ++ E + G L +L RSL M +
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-------RSLRPEMENNPVLAPPSLSKMI 128
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
++A +A G+A+L+ VHRD+ A N + E+F + G+++ ++ +
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYY 181
Query: 433 MAGGT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GG +++PE + TT SDV+SFGV+L EI
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 273 GNRL-LGDSKTGGTYSG-ILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV 330
G+R+ LG G Y+G L + R+A+K + + + + EI L H N+V
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT-TLAQGIAFLHDKV 389
G ++G I E V G L L + G D + T + +G+ +LHD
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRS--KWGPLKDNEQTIGFYTKQILEGLKYLHDN- 127
Query: 390 KPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+VHRDI+ NVL++ G + G SK + + T GT Y+APE + +
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDK 183
Query: 449 NE--LTTKSDVYSFGVLLLEI 467
+D++S G ++E+
Sbjct: 184 GPRGYGKAADIWSLGCTIIEM 204
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 41 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L LH I + + +A AQG+ +LH K
Sbjct: 100 YS-TKPQLAIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVY---R 448
++HRD++++N+ L E+ + GL ++ W + ++G ++APE + +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDK 211
Query: 449 NELTTKSDVYSFGVLLLEI 467
N + +SDVY+FG++L E+
Sbjct: 212 NPYSFQSDVYAFGIVLYEL 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 237 GVLLWEI 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 273 GNRLLGDSKTGGTYSGILPD-----GSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHH 324
G+ +LGD+ GT+ + G +VAVK L R S + EI H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P+++ + D ++V E+V G L +I + GR + R ++ + + +
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGEL---FDYICKHGRVEEMEAR-RLFQQILSAVDY 126
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAP 443
H + VVHRD++ NVLLD A + GLS + E +++ + G+ Y AP
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD----SCGSPNYAAP 179
Query: 444 EFVY-RNELTTKSDVYSFGVLL 464
E + R + D++S GV+L
Sbjct: 180 EVISGRLYAGPEVDIWSCGVIL 201
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 253 PSWKVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSF 306
PS + LR + + + ++LG G Y G+ +P+G +V A+ L+ +S
Sbjct: 33 PSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSP 92
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS- 365
+ KE E A + +P++ + G C + I LD H G
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 152
Query: 366 -LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW 424
L+W ++ +A+G+ +L D+ +VHRD+ A NVL+ + GL+K +
Sbjct: 153 LLNWCVQ------IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
Query: 425 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
E + ++A E + T +SDV+S+GV + E+
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 246
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 129
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + G +K + E +
Sbjct: 130 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 353 DRWLHHIPRGGRS---------------LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRD 397
+L R R+ L + + +A+G+ FL + +HRD
Sbjct: 121 STYL----RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173
Query: 398 IRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV 457
+ A N+LL E+ + GL++ + + R A ++APE ++ T +SDV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 458 YSFGVLLLEI 467
+SFGVLL EI
Sbjct: 234 WSFGVLLWEI 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 228 GVLLWEI 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY-EFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 228 GVLLWEI 234
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAV--------KRLKRSSF 306
++F ELR + ++LG G + G+ +P+G + + + R SF
Sbjct: 8 RIFKETELRKL--------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
Q + IG L H ++V + G C +V +++ PL L H+ + +L
Sbjct: 60 QAVTDHMLAIGS---LDHAHIVRLLGLC-PGSSLQLVTQYL---PLGSLLDHVRQHRGAL 112
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 426
+ + +A+G+ +L + +VHR++ A NVLL + G++ +P +
Sbjct: 113 GPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Q A ++A E ++ + T +SDV+S+GV + E+
Sbjct: 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 210
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 272 EGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEFYS---EIGRFARLH 323
+G R+LG G++ ++ G AVK + + ++K + S E+ +L
Sbjct: 29 KGQRVLG----KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ + D G Y+V E G L + I R S A R + + GI
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAAR--IIRQVLSGIT 140
Query: 384 FLHDKVKPHVVHRDIRASNVLLD---EEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYG 439
++H K +VHRD++ N+LL+ ++ ++ GLS F + M+++ GT
Sbjct: 141 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI----GTAY 193
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLL 464
Y+APE V K DV+S GV+L
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVIL 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNGPLDRWLHHIPRGGRSLD 367
++ Y EI +L HPN+V + D + Y+V+E V GP+ +P + L
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTL-KPLS 135
Query: 368 WAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEV 426
L +GI +LH + ++HRDI+ SN+L+ E+ + G+S +F +
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 427 MQERTVMAGGTYGYLAPEFV--YRNELTTKS-DVYSFGVLL 464
+ TV GT ++APE + R + K+ DV++ GV L
Sbjct: 193 LLSNTV---GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 292 DGSRVAVKRLKRSSFQRKKEFY---SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
+G A+K LK+ R K+ E + + HP ++ + G D +++ +++
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L L R + + A + + +LH K +++RD++ N+LLD+
Sbjct: 90 GGELFSLL----RKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKN 142
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ G +K+VP + T GT Y+APE V D +SFG+L+ E+
Sbjct: 143 GHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 237 GVLLWEI 243
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 256 KVFTTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAV--------KRLKRSSF 306
++F ELR + ++LG G + G+ +P+G + + + R SF
Sbjct: 26 RIFKETELRKL--------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
Q + IG L H ++V + G C +V +++ PL L H+ + +L
Sbjct: 78 QAVTDHMLAIGS---LDHAHIVRLLGLC-PGSSLQLVTQYL---PLGSLLDHVRQHRGAL 130
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 426
+ + +A+G+ +L + +VHR++ A NVLL + G++ +P +
Sbjct: 131 GPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Q A ++A E ++ + T +SDV+S+GV + E+
Sbjct: 188 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++L G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 9 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 126 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 275 RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+++G+ G + L + VA+K++ + + +E +I R + HPN+V +K
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL--QIMRIVK--HPNVVDLKAFF 101
Query: 335 YDHGDRY------IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
Y +GD+ +V E+V + R H + +++ + L + +A++H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 389 VKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY 447
+ HRDI+ N+LLD G L+ G +K + + E V + Y APE ++
Sbjct: 161 ---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL---IAGEPNVSXICSRYYRAPELIF 214
Query: 448 -RNELTTKSDVYSFGVLLLEI 467
TT D++S G ++ E+
Sbjct: 215 GATNYTTNIDIWSTGCVMAEL 235
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
EI ++ P + G +I+ E++ G L P LD
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIAT 128
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ + +G+ +LH + K +HRDI+A+NVLL E L G++ + ++ T +
Sbjct: 129 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLLCAQEC 493
GT ++APE + ++ +K+D++S G+ +E+ R ++ +H M +L
Sbjct: 186 --GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----ARGEPPHSELHPMKVL----- 233
Query: 494 LMLFISCNNWPS 505
I NN P+
Sbjct: 234 --FLIPKNNPPT 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++L G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 132
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 133 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Query: 362 GGRSLDWAM-----RMKVATTLAQ---GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
GG +LD ++AT L + G+ +LH + K +HRDI+A+NVLL E+ L
Sbjct: 105 GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKL 161
Query: 414 MGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G++ + ++ T + GT ++APE + ++ +K+D++S G+ +E+
Sbjct: 162 ADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
EI ++ P + G +I+ E++ G L P LD
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIAT 108
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ + +G+ +LH + K +HRDI+A+NVLL E L G++ + ++ T +
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLLCAQEC 493
GT ++APE + ++ +K+D++S G+ +E+ R ++ +H M +L
Sbjct: 166 --GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----ARGEPPHSELHPMKVL----- 213
Query: 494 LMLFISCNNWPS 505
I NN P+
Sbjct: 214 --FLIPKNNPPT 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 127
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + G +K + E +
Sbjct: 128 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 178
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 239 GVLLWEI 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I+ LD H G L+W ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 127
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + G +K + E +
Sbjct: 128 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 125
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + G +K + E +
Sbjct: 126 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 273 GNRLLGDSKTGGTYSGILPD-----GSRVAVKRLKRS---SFQRKKEFYSEIGRFARLHH 324
G+ +LGD+ GT+ + G +VAVK L R S + EI H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 325 PNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
P+++ + D ++V E+V G L +I + GR + R ++ + + +
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGEL---FDYICKHGRVEEMEAR-RLFQQILSAVDY 126
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + VVHRD++ NVLLD A + GLS + E + G+ Y APE
Sbjct: 127 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRTSCGSPNYAAPE 180
Query: 445 FVY-RNELTTKSDVYSFGVLL 464
+ R + D++S GV+L
Sbjct: 181 VISGRLYAGPEVDIWSCGVIL 201
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 28/205 (13%)
Query: 272 EGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEFYS---EIGRFARLH 323
+G R+LG G++ ++ G AVK + + ++K + S E+ +L
Sbjct: 35 KGQRVLGK----GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ + D G Y+V E G L + I R S A R + + GI
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAAR--IIRQVLSGIT 146
Query: 384 FLHDKVKPHVVHRDIRASNVLLD---EEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYG 439
++H K +VHRD++ N+LL+ ++ ++ GLS F + M+++ GT
Sbjct: 147 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI----GTAY 199
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLL 464
Y+APE V K DV+S GV+L
Sbjct: 200 YIAPE-VLHGTYDEKCDVWSTGVIL 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++L G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 132
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + GL+K + E +
Sbjct: 133 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 266 ITKNFSEGNRLLGDSK-----TGGTYSGIL---PDGSRVAVKRLKRSSFQRKKEF----- 312
+ K E ++ + D + G ++ I+ D A+K+ ++S ++K++F
Sbjct: 19 LNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNN 78
Query: 313 ------------YSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIP 360
+E+ + + + +G ++ + YI+YE++ N + ++ +
Sbjct: 79 DKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF 138
Query: 361 RGGRSLDWAMRMKVATTLAQGI----AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 416
++ + ++V + + + +++H++ ++ HRD++ SN+L+D+ V
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKN-----GRV 191
Query: 417 GLSKFVPWEVMQERTVMAG-GTYGYLAPEFVYRNELT---TKSDVYSFGVLL 464
LS F E M ++ + GTY ++ PEF + NE + K D++S G+ L
Sbjct: 192 KLSDFGESEYMVDKKIKGSRGTYEFMPPEF-FSNESSYNGAKVDIWSLGICL 242
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 237 GVLLWEI 243
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 294 SRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
+ V +K L ++ + F+ ++L H +LV G C+ + +V EFV G LD
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD 100
Query: 354 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL----DEEF 409
+L + ++ +++VA LA + FL + ++H ++ A N+LL D +
Sbjct: 101 TYLK---KNKNCINILWKLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKT 154
Query: 410 G----AHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVL 463
G L G+S +P +++QER ++ PE + L +D +SFG
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQERI-------PWVPPECIENPKNLNLATDKWSFGTT 207
Query: 464 LLEI--------RLVLCRRWWTLYTLVHSMSLLCAQECLMLFISCNNW-PSH 506
L EI + +R Y H + A E L +C ++ P H
Sbjct: 208 LWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDH 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 310 KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWA 369
+ + E+ L HP LV + D D ++V + ++ G L +H+ + +
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL---RYHLQQNVHFKEET 116
Query: 370 MRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQE 429
+++ + L + +L ++ ++HRD++ N+LLDE H+ ++ +P E +
Sbjct: 117 VKLFICE-LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--Q 170
Query: 430 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTL 478
T MA GT Y+APE + K YSF V WW+L
Sbjct: 171 ITTMA-GTKPYMAPEMFS----SRKGAGYSFAV-----------DWWSL 203
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY-EFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 228 GVLLWEI 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKR-SSFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ +S + KE E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 127
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + G +K + E +
Sbjct: 128 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 263 LRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRV----AVKRLKRS-SFQRKKEFYSEI 316
LR + + + ++LG G Y G+ +P+G +V A+K L+ + S + KE E
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 317 GRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRS--LDWAMRMKV 374
A + +P++ + G C + I LD H G L+W ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 132
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMA 434
+A+G+ +L D+ +VHRD+ A NVL+ + G +K + E +
Sbjct: 133 ---IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++A E + T +SDV+S+GV + E+
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDR-YIVYEFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G ++ EF G L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 274 GVLLWEI 280
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYS---EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G AVK + + ++K + S E+ +L HPN++ + D G Y+V E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD--- 406
G L + I R S A R + + GI ++H K +VHRD++ N+LL+
Sbjct: 135 GEL--FDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKS 187
Query: 407 EEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
++ ++ GLS F + M+++ GT Y+APE V K DV+S GV+L
Sbjct: 188 KDANIRIIDFGLSTHFEASKKMKDKI----GTAYYIAPE-VLHGTYDEKCDVWSTGVIL 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYS---EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G AVK + + ++K + S E+ +L HPN++ + D G Y+V E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD--- 406
G L + I R S A R + + GI ++H K +VHRD++ N+LL+
Sbjct: 134 GEL--FDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKS 186
Query: 407 EEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
++ ++ GLS F + M+++ GT Y+APE V K DV+S GV+L
Sbjct: 187 KDANIRIIDFGLSTHFEASKKMKDKI----GTAYYIAPE-VLHGTYDEKCDVWSTGVIL 240
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 296 VAVKRLKR-SSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVY-EFVVNGPL 352
VAVK LK ++ + SE+ + HH N+V + G C G +V EF G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 353 DRWL-----HHIPRGGRSLDWAMRMKVATTL-------AQGIAFLHDKVKPHVVHRDIRA 400
+L +P D L A+G+ FL + +HRD+ A
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSF 460
N+LL E+ + GL++ + + R A ++APE ++ T +SDV+SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 461 GVLLLEI 467
GVLL EI
Sbjct: 228 GVLLWEI 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 273 GNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
G R+ G G Y G V + + + Q+ + F +E+G + H N++ G
Sbjct: 17 GQRI-GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 333 CCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
IV ++ L HH+ + + +A A+G+ +LH K
Sbjct: 76 YST-KPQLAIVTQWCEGSSL---YHHLHASETKFEMKKLIDIARQTARGMDYLHAK---S 128
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY---RN 449
++HRD++++N+ L E+ + GL+ + G+ ++APE + N
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 450 ELTTKSDVYSFGVLLLEI 467
+ +SDVY+FG++L E+
Sbjct: 189 PYSFQSDVYAFGIVLYEL 206
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 294 SRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
+ V +K L ++ + F+ ++L H +LV G C + +V EFV G LD
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD 100
Query: 354 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL----DEEF 409
+L + ++ +++VA LA + FL + ++H ++ A N+LL D +
Sbjct: 101 TYLK---KNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKT 154
Query: 410 G----AHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVL 463
G L G+S +P +++QER ++ PE + L +D +SFG
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQERI-------PWVPPECIENPKNLNLATDKWSFGTT 207
Query: 464 LLEI--------RLVLCRRWWTLYTLVHSMSLLCAQECLMLFISCNNW-PSH 506
L EI + +R Y H + A E L +C ++ P H
Sbjct: 208 LWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDH 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 372 MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 431
+ +A AQG+ +LH K +++HRD++++N+ L E + GL+ ++
Sbjct: 135 IDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 432 VMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEI 467
G+ ++APE + N + +SDVYS+G++L E+
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 296 VAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK L + + Q+ + F +E+G + H N++ G IV ++ L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSL- 106
Query: 354 RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL 413
HH+ + + +A A+G+ +LH K ++HRD++++N+ L E+ +
Sbjct: 107 --YHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKI 161
Query: 414 MGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEI 467
GL ++ W + ++G ++APE + N + +SDVY+FG++L E+
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
EI ++ P + G +I+ E++ G L P LD
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIAT 123
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTV 432
+ + +G+ +LH + K +HRDI+A+NVLL E L G++ + ++ + V
Sbjct: 124 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 180
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLLCAQE 492
GT ++APE + ++ +K+D++S G+ +E+ R ++ +H M +L
Sbjct: 181 ---GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----ARGEPPHSELHPMKVL---- 228
Query: 493 CLMLFISCNNWPS 505
I NN P+
Sbjct: 229 ---FLIPKNNPPT 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 40/184 (21%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
AVK + +S K++ EI R HPN++ +K D Y+V E +
Sbjct: 56 AVKVIDKS----KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELM-------- 103
Query: 356 LHHIPRGGRSLDWAMRMK---------VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
RGG LD +R K V T+ + + +LH + VVHRD++ SN+L
Sbjct: 104 -----RGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYV 155
Query: 407 EEFGA----HLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSF 460
+E G + G +K ++ E ++ Y ++APE + R D++S
Sbjct: 156 DESGNPECLRICDFGFAK----QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSL 211
Query: 461 GVLL 464
G+LL
Sbjct: 212 GILL 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 40/184 (21%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
AVK + +S K++ EI R HPN++ +K D Y+V E +
Sbjct: 56 AVKVIDKS----KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELM-------- 103
Query: 356 LHHIPRGGRSLDWAMRMK---------VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
RGG LD +R K V T+ + + +LH + VVHRD++ SN+L
Sbjct: 104 -----RGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYV 155
Query: 407 EEFGA----HLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSF 460
+E G + G +K ++ E ++ Y ++APE + R D++S
Sbjct: 156 DESGNPECLRICDFGFAK----QLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSL 211
Query: 461 GVLL 464
G+LL
Sbjct: 212 GILL 215
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 295 RVAVK---RLKRSSFQRKKEFYSEIGRFAR-------LHHPNLVAVKGCCYDHGDRYIVY 344
++AV+ R++R++ + K F ++ RF + L HPN++ + D+ D Y+V
Sbjct: 26 KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85
Query: 345 EFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E G L +R +H R R D A MK + +A+ H K +V HRD++ N
Sbjct: 86 ELCTGGELFERVVHK--RVFRESDAARIMK---DVLSAVAYCH---KLNVAHRDLKPENF 137
Query: 404 LL---DEEFGAHLMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYS 459
L + L+ GL ++F P ++M+ + GT Y++P+ V + D +S
Sbjct: 138 LFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTPYYVSPQ-VLEGLYGPECDEWS 192
Query: 460 FGVLL 464
GV++
Sbjct: 193 AGVMM 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
EI ++ P + G +I+ E++ G L P LD
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIAT 108
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTV 432
+ + +G+ +LH + K +HRDI+A+NVLL E L G++ + ++ + V
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 433 MAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLLCAQE 492
GT ++APE + ++ +K+D++S G+ +E+ R ++ +H M +L
Sbjct: 166 ---GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-----ARGEPPHSELHPMKVL---- 213
Query: 493 CLMLFISCNNWPS 505
I NN P+
Sbjct: 214 ---FLIPKNNPPT 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 140
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+DE+ + G +K V + RT GT YL
Sbjct: 141 FEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 192
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 296 VAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRY-IVYEFVVNGPL 352
VAVK L + + Q+ + F +E+G + H N++ G Y + IV ++ L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTAPQLAIVTQWCEGSSL 106
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
HH+ + + +A A+G+ +LH K ++HRD++++N+ L E+
Sbjct: 107 ---YHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVK 160
Query: 413 LMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVY---RNELTTKSDVYSFGVLLLEI 467
+ GL ++ W + ++G ++APE + N + +SDVY+FG++L E+
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYEL 218
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 15/208 (7%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQRK---KEFYSEIGRF 319
R T + + R LG K G Y + A+K L +S +++ + EI
Sbjct: 10 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+ L HPN++ + +D Y++ EF G L + L + GR D LA
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGR-FDEQRSATFMEELA 125
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ + H++ V+HRDI+ N+L+ + + G S P R GT
Sbjct: 126 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLD 178
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
YL PE + K D++ GVL E
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEF 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 15/208 (7%)
Query: 264 RSITKNFSEGNRLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQRK---KEFYSEIGRF 319
R T + + R LG K G Y + A+K L +S +++ + EI
Sbjct: 9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 320 ARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLA 379
+ L HPN++ + +D Y++ EF G L + L + GR D LA
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ---KHGR-FDEQRSATFMEELA 124
Query: 380 QGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG 439
+ + H++ V+HRDI+ N+L+ + + G S P R GT
Sbjct: 125 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLD 177
Query: 440 YLAPEFVYRNELTTKSDVYSFGVLLLEI 467
YL PE + K D++ GVL E
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 295 RVAVK---RLKRSSFQRKKEFYSEIGRFAR-------LHHPNLVAVKGCCYDHGDRYIVY 344
++AV+ R++R++ + K F ++ RF + L HPN++ + D+ D Y+V
Sbjct: 43 KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 102
Query: 345 EFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E G L +R +H R R D A MK + +A+ H K +V HRD++ N
Sbjct: 103 ELCTGGELFERVVHK--RVFRESDAARIMK---DVLSAVAYCH---KLNVAHRDLKPENF 154
Query: 404 LL---DEEFGAHLMGVGL-SKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYS 459
L + L+ GL ++F P ++M+ + GT Y++P+ V + D +S
Sbjct: 155 LFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTPYYVSPQ-VLEGLYGPECDEWS 209
Query: 460 FGVLL 464
GV++
Sbjct: 210 AGVMM 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 320 ARLHHPNLVAVKGCCYDHGDR-YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTL 378
A L P + C+ DR Y V E+V G L ++HI + G+ + A +
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGK-FKEPQAVFYAAEI 129
Query: 379 AQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTY 438
+ G+ FLH K +++RD++ NV+LD E + G+ K + + R GT
Sbjct: 130 SIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC--GTP 184
Query: 439 GYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
Y+APE + D +++GVLL E+
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G ++A K +K + K+E +EI +L H NL+ + D +V E+V G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 353 -DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
DR + LD + MK + +GI +H + +++H D++ N+L
Sbjct: 174 FDRIIDE-SYNLTELDTILFMK---QICEGIRHMH---QMYILHLDLKPENILCVNRDAK 226
Query: 412 H--LMGVGLS-KFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
++ GL+ ++ P +E+ + GT +LAPE V + ++ +D++S GV+
Sbjct: 227 QIKIIDFGLARRYKP----REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 15/197 (7%)
Query: 275 RLLGDSKTGGTYSGILPDGSRV-AVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV 330
R LG K G Y + A+K L +S +++ + EI + L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 331 KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVK 390
+D Y++ EF G L + L + GR D LA + + H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQ---KHGR-FDEQRSATFMEELADALHYCHER-- 133
Query: 391 PHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNE 450
V+HRDI+ N+L+ + + G S P R GT YL PE +
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKT 188
Query: 451 LTTKSDVYSFGVLLLEI 467
K D++ GVL E
Sbjct: 189 HDEKVDLWCAGVLCYEF 205
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ +K + ++V++ + G L +L +L K+ L + I
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVIC 125
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLA 442
LH K ++VHRD++ N+LLD++ L G S + P E ++E GT YLA
Sbjct: 126 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE----VCGTPSYLA 178
Query: 443 PEFV 446
PE +
Sbjct: 179 PEII 182
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 148
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 200
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ G+ LH + ++++RD++ NVLLD++ + +GL+ V + Q +T
Sbjct: 296 AQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYA 350
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT G++APE + E D ++ GV L E+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ G+ LH + ++++RD++ NVLLD++ + +GL+ V + Q +T
Sbjct: 296 AQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYA 350
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT G++APE + E D ++ GV L E+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ G+ LH + ++++RD++ NVLLD++ + +GL+ V + Q +T
Sbjct: 296 AQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYA 350
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT G++APE + E D ++ GV L E+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+ G+ LH + ++++RD++ NVLLD++ + +GL+ V + Q +T
Sbjct: 296 AQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYA 350
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
GT G++APE + E D ++ GV L E+
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFAEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
+K++ +EI L +P++V G D Y+V E R L + + +++
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKAV 139
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 426
QG+ +LH+ V+HRD++ N+ L+++ + GL+ + ++
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG 196
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
+++T+ GT Y+APE + + + + D++S G +L
Sbjct: 197 ERKKTLC--GTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
L+ +TG Y+ + D +V + + K+ + ++ P LV ++
Sbjct: 52 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFPFLVKLEFSFK 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
D+ + Y+V E+V G + H+ R GR + R A + +LH +++
Sbjct: 105 DNSNLYMVMEYVPGGEM---FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSL---DLIY 157
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS 455
RD++ N+L+D++ + G +K V + RT GT YLAPE +
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAV 212
Query: 456 DVYSFGVLLLEI 467
D ++ GVL+ E+
Sbjct: 213 DWWALGVLIYEM 224
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ +K + ++V++ + G L +L +L K+ L + I
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVIC 138
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLA 442
LH K ++VHRD++ N+LLD++ L G S + P E ++E GT YLA
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE----VCGTPSYLA 191
Query: 443 PEFV 446
PE +
Sbjct: 192 PEII 195
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 174
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
+K++ +EI L +P++V G D Y+V E R L + + +++
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKAV 139
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 426
QG+ +LH+ V+HRD++ N+ L+++ + GL+ + ++
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD- 195
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
ER GT Y+APE + + + + D++S G +L
Sbjct: 196 -GERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|1JWI|A Chain A, Crystal Structure Of Bitiscetin, A Von Willeband Factor-
Dependent Platelet Aggregation Inducer.
pdb|1UEX|A Chain A, Crystal Structure Of Von Willebrand Factor A1 Domain
Complexed With Snake Venom Bitiscetin
Length = 131
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCG----K 108
C PDW + K C+ +W+++E +C E GHLA++ S EE KL K
Sbjct: 4 CLPDW--SSYKGHCYKVFKKVGTWEDAEKFCVENSGHLASIDSKEEADFVTKLASQTLTK 61
Query: 109 NVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLV 168
V W+G R + T S +W+D S E++ + C L H
Sbjct: 62 FVYDAWIGLRDESKTQQCSPQWTDGSSVVYENVDEP----TKCFGLDVHTEY-------- 109
Query: 169 SNGSRSLVTERCNTSHPFIC 188
R+ C +PFIC
Sbjct: 110 ----RTWTDLPCGEKNPFIC 125
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 40/184 (21%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
AVK + +S K++ EI R HPN++ +K YD G Y +VV
Sbjct: 51 AVKIIDKS----KRDPTEEIEILLRYGQHPNIITLKDV-YDDGK----YVYVVT------ 95
Query: 356 LHHIPRGGRSLDWAMRMK---------VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
+ +GG LD +R K V T+ + + +LH + VVHRD++ SN+L
Sbjct: 96 --ELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYV 150
Query: 407 EEFG----AHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSF 460
+E G + G +K ++ E ++ Y ++APE + R D++S
Sbjct: 151 DESGNPESIRICDFGFAK----QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSL 206
Query: 461 GVLL 464
GVLL
Sbjct: 207 GVLL 210
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 293 GSRVAVKRLKRSSFQRKKE-FYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
G AVK + + + + K+ +EI ++ H N+VA++ Y+V + V G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQ----GIAFLHDKVKPHVVHRDIRASNVLL-- 405
L I G + K A+TL + + +LH + +VHRD++ N+L
Sbjct: 107 L---FDRIVEKGFYTE-----KDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYS 155
Query: 406 -DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
DEE + GLSK E + A GT GY+APE + + + D +S GV+
Sbjct: 156 QDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 212
Query: 465 LEIRLVLC 472
++LC
Sbjct: 213 Y---ILLC 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 296 VAVKRLKRSSFQRK-KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
VA+K LK+ + + +E E +L +P +V + G C +V E GPL +
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHK 98
Query: 355 WL----HHIPRGGRSLDWAMRMKVATTLAQ---GIAFLHDKVKPHVVHRDIRASNVLLDE 407
+L IP VA L Q G+ +L +K + VHRD+ A NVLL
Sbjct: 99 FLVGKREEIPVSN----------VAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVN 145
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYSFGVLLLE 466
A + GLSK + + AG + APE + + +++SDV+S+GV + E
Sbjct: 146 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
L+ +TG Y+ + D +V + + K+ + ++ P LV ++
Sbjct: 52 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFPFLVKLEFSFK 104
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
D+ + Y+V E+V G + H+ R GR + R A + +LH +++
Sbjct: 105 DNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIY 157
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS 455
RD++ N+L+D++ + G +K V + RT GT YLAPE +
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAV 212
Query: 456 DVYSFGVLLLEI 467
D ++ GVL+ E+
Sbjct: 213 DWWALGVLIYEM 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSRVA 297
+ PA S P + + + K+ GN RL+ D ++ VA
Sbjct: 1 MDRPAVSG--PMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSN----------ELVA 48
Query: 298 VKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
VK ++R + + EI L HPN+V K IV E+ G L
Sbjct: 49 VKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL---FE 104
Query: 358 HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM--G 415
I GR + R L G+++ H V HRD++ N LLD L
Sbjct: 105 RICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICA 160
Query: 416 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK-SDVYSFGVLL 464
G SK V+ + GT Y+APE + + E K +DV+S GV L
Sbjct: 161 FGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAV+ +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 348 VNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
G + D + H GR + R K ++ + + H K +VHRD++A N+LLD
Sbjct: 96 SGGEVFDYLVAH----GRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 147
Query: 407 EEFGAHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ + G S +F + E G+ Y APE F + + DV+S GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDEFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAVK +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 348 VNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
G + D + H GR + R K ++ + + H K +VHRD++A N+LLD
Sbjct: 96 SGGEVFDYLVAH----GRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 147
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ + G S + + G+ Y APE F + + DV+S GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 26/204 (12%)
Query: 272 EGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEFYS---EIGRFARLH 323
+G R+LG G++ ++ G AVK + + ++K + S E+ +L
Sbjct: 29 KGQRVLG----KGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN+ + D G Y+V E G L + I R S A R + + GI
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAAR--IIRQVLSGIT 140
Query: 384 FLHDKVKPHVVHRDIRASNVLLD---EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
+ H K +VHRD++ N+LL+ ++ ++ GLS +E ++ G Y Y
Sbjct: 141 YXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKIGTAY-Y 194
Query: 441 LAPEFVYRNELTTKSDVYSFGVLL 464
+APE V K DV+S GV+L
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVIL 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAVK +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 348 VNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
G + D + H GR + R K ++ + + H K +VHRD++A N+LLD
Sbjct: 96 SGGEVFDYLVAH----GRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 147
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ + G S + + G+ Y APE F + + DV+S GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSRVA 297
+ PA S P + + + K+ GN RL+ D ++ VA
Sbjct: 1 MDRPAVSG--PMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSN----------ELVA 48
Query: 298 VKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
VK ++R + + EI L HPN+V K IV E+ G L
Sbjct: 49 VKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL---FE 104
Query: 358 HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM--G 415
I GR + R L G+++ H V HRD++ N LLD L
Sbjct: 105 RICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICA 160
Query: 416 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK-SDVYSFGVLL 464
G SK + TV GT Y+APE + + E K +DV+S GV L
Sbjct: 161 FGYSKSSVLHSQPKDTV---GTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 342 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRAS 401
+V + G L ++H+ + G A + A + G+ LH + +V+RD++
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPE 315
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYS 459
N+LLD+ + +GL+ VP E + G GT GY+APE V T D ++
Sbjct: 316 NILLDDHGHIRISDLGLAVHVP-----EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 460 FGVLLLEI 467
G LL E+
Sbjct: 371 LGCLLYEM 378
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 89/230 (38%), Gaps = 30/230 (13%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSRVA 297
+ PA + P + + + K+ GN RL+ D + VA
Sbjct: 1 MDRPAVAG--PMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQAN----------ELVA 48
Query: 298 VKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
VK ++R + + EI L HPN+V K IV E+ G L
Sbjct: 49 VKYIERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL---FE 104
Query: 358 HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHL--MG 415
I GR + R L G+++ H V HRD++ N LLD L
Sbjct: 105 RICNAGRFSEDEARF-FFQQLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIAD 160
Query: 416 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK-SDVYSFGVLL 464
G SK V+ + A GT Y+APE + + E K +DV+S GV L
Sbjct: 161 FGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 40/184 (21%)
Query: 297 AVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
AVK + +S K++ EI R HPN++ +K D Y+V E +
Sbjct: 51 AVKIIDKS----KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM-------- 98
Query: 356 LHHIPRGGRSLDWAMRMK---------VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
+GG LD +R K V T+ + + +LH + VVHRD++ SN+L
Sbjct: 99 -----KGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYV 150
Query: 407 EEFG----AHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTKSDVYSF 460
+E G + G +K ++ E ++ Y ++APE + R D++S
Sbjct: 151 DESGNPESIRICDFGFAK----QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSL 206
Query: 461 GVLL 464
GVLL
Sbjct: 207 GVLL 210
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 437
+A+G+ FL + +HRD+ A N+LL E+ + GL++ + + R A
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 438 YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE ++ T +SDV+SFGVLL EI
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 437
+A+G+ FL + +HRD+ A N+LL E+ + GL++ + + R A
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 438 YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE ++ T +SDV+SFGVLL EI
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 437
+A+G+ FL + +HRD+ A N+LL E+ + GL++ + + R A
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 438 YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE ++ T +SDV+SFGVLL EI
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT 437
+A+G+ FL + +HRD+ A N+LL E+ + GL++ + + R A
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 438 YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE ++ T +SDV+SFGVLL EI
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
L+ +TG Y+ + D +V + + K+ + ++ P LV ++
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFPFLVKLEFSFK 112
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
D+ + Y+V E+V G + H+ R GR + R A + +LH +++
Sbjct: 113 DNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIY 165
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS 455
RD++ N+L+D++ + G +K V + RT GT YLAPE +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAV 220
Query: 456 DVYSFGVLLLEI 467
D ++ GVL+ E+
Sbjct: 221 DWWALGVLIYEM 232
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 269 NFSEGNRL--LGDSKTGGTYSGILPDGSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHH 324
+F + N L L ++ +G + G G+ + VK LK S ++ ++F E R H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 325 PNLVAVKGCCYDHGDRY--IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
PN++ V G C + ++ ++ G L LH +D + +K A +A+G+
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGM 124
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAH--LMGVGLSKFVPWEVMQERTVMAGGTY-- 438
AFLH ++P + + + +V++DE+ A + V S P G Y
Sbjct: 125 AFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-----------GRMYAP 172
Query: 439 GYLAPEFVYRNELTTK---SDVYSFGVLLLEI 467
++APE + + T +D++SF VLL E+
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWEL 204
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 36/247 (14%)
Query: 242 LSNPAASALVPPSWKVFTT-----EELRSITKNFSEGNRLLGDSKTG-GTYSGILPDGSR 295
+++P +P VF + EEL+ N L+ D + G G + + R
Sbjct: 299 ITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYR 358
Query: 296 -------VAVKRLKRSSFQRK-KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
VA+K LK+ + + +E E +L +P +V + G C +V E
Sbjct: 359 MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMA 417
Query: 348 VNGPLDRWL----HHIPRGGRSLDWAMRMKVATTLAQ---GIAFLHDKVKPHVVHRDIRA 400
GPL ++L IP VA L Q G+ +L +K + VHR++ A
Sbjct: 418 GGGPLHKFLVGKREEIPVSN----------VAELLHQVSMGMKYLEEK---NFVHRNLAA 464
Query: 401 SNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-TYGYLAPEFVYRNELTTKSDVYS 459
NVLL A + GLSK + + AG + APE + + +++SDV+S
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524
Query: 460 FGVLLLE 466
+GV + E
Sbjct: 525 YGVTMWE 531
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
L+ +TG Y+ + D +V + + K+ + ++ P LV ++
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFPFLVKLEFSFK 112
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
D+ + Y+V E+V G + H+ R GR + R A + +LH +++
Sbjct: 113 DNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIY 165
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS 455
RD++ N+L+D++ + G +K V + RT GT YLAPE +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAV 220
Query: 456 DVYSFGVLLLEI 467
D ++ GVL+ E+
Sbjct: 221 DWWALGVLIYEM 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 342 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRAS 401
+V + G L ++H+ + G A + A + G+ LH + +V+RD++
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPE 315
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYS 459
N+LLD+ + +GL+ VP E + G GT GY+APE V T D ++
Sbjct: 316 NILLDDHGHIRISDLGLAVHVP-----EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 460 FGVLLLEI 467
G LL E+
Sbjct: 371 LGCLLYEM 378
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCY 335
L+ +TG Y+ + D +V + + K+ + ++ P LV ++
Sbjct: 60 LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFPFLVKLEFSFK 112
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
D+ + Y+V E+V G + H+ R GR + R A + +LH +++
Sbjct: 113 DNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIY 165
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS 455
RD++ N+L+D++ + G +K V + RT GT YLAPE +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAV 220
Query: 456 DVYSFGVLLLEI 467
D ++ GVL+ E+
Sbjct: 221 DWWALGVLIYEM 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
+K++ +EI L +P++V G D Y+V E R L + + +++
Sbjct: 68 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKAV 123
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 426
QG+ +LH+ V+HRD++ N+ L+++ + GL+ + ++
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD- 179
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
ER GT Y+APE + + + + D++S G +L
Sbjct: 180 -GERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 216
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 139
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 140 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 191
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 273 GNRLLGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVA 329
G G Y I D + VAVK LK S+ ++E SE+ + L +H N+V
Sbjct: 48 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 107
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHH--------------IPRGGRSLDWAMRMKVA 375
+ G C G ++ E+ G L +L + +LD + +
Sbjct: 108 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 167
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+A+G+AFL K + +HRD+ A N+LL + GL++ ++ + +
Sbjct: 168 YQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVK 220
Query: 436 GT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G ++APE ++ T +SDV+S+G+ L E+
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYS-EIGRFARLHHPNLVAVKGC------CYDHGDRYIVYE 345
G +VA+K+ ++ + +E + EI +L+HPN+V+ + + + E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
+ G L ++L+ + +R + + ++ + +LH+ ++HRD++ N++L
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN---RIIHRDLKPENIVL 154
Query: 406 D---EEFGAHLMGVGLSKFVPWEVMQ-ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
+ ++ +G +K E+ Q E GT YLAPE + + + T D +SFG
Sbjct: 155 QPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 462 VLLLE 466
L E
Sbjct: 211 TLAFE 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYS-EIGRFARLHHPNLVAVKGC------CYDHGDRYIVYE 345
G +VA+K+ ++ + +E + EI +L+HPN+V+ + + + E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
+ G L ++L+ + +R + + ++ + +LH+ ++HRD++ N++L
Sbjct: 100 YCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN---RIIHRDLKPENIVL 155
Query: 406 D---EEFGAHLMGVGLSKFVPWEVMQ-ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFG 461
+ ++ +G +K E+ Q E GT YLAPE + + + T D +SFG
Sbjct: 156 QPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 462 VLLLE 466
L E
Sbjct: 212 TLAFE 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 293 GSRVAVKRLKRSSFQRK-KEFYSEIGRFARLHH-PNLVAVKGCCYDHGDRYIVYEFVVNG 350
G +AVK+++RS + + K ++ + H P +V G + D +I E + G
Sbjct: 50 GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--G 107
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
L +G +M VA + + + +L K K V+HRD++ SN+LLDE
Sbjct: 108 TCAEKLKKRMQGPIPERILGKMTVA--IVKALYYL--KEKHGVIHRDVKPSNILLDERGQ 163
Query: 411 AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFV-----YRNELTTKSDVYSFGVLLL 465
L G+S + + ++R+ G Y+APE + + + ++DV+S G+ L+
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220
Query: 466 EI 467
E+
Sbjct: 221 EL 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAVK +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 348 VNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
G + D + H GR + R K ++ + + H K +VHRD++A N+LLD
Sbjct: 96 SGGEVFDYLVAH----GRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 147
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ + G S + + G Y APE F + + DV+S GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 307 QRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSL 366
+K++ +EI L +P++V G D Y+V E R L + + +++
Sbjct: 84 HQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKAV 139
Query: 367 DWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEV 426
QG+ +LH+ V+HRD++ N+ L+++ + GL+ + ++
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD- 195
Query: 427 MQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
ER GT Y+APE + + + + D++S G +L
Sbjct: 196 -GERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ ++
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 296 VAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK S+ ++E SE+ + L +H N+V + G C G ++ E+ G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 354 RWLHH--------------IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIR 399
+L + +LD + + +A+G+AFL K + +HRD+
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKS 455
A N+LL + GL++ ++ + + G ++APE ++ T +S
Sbjct: 173 ARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 228
Query: 456 DVYSFGVLLLEI 467
DV+S+G+ L E+
Sbjct: 229 DVWSYGIFLWEL 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 273 GNRLLGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVA 329
G G Y I D + VAVK LK S+ ++E SE+ + L +H N+V
Sbjct: 50 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 109
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHH--------------IPRGGRSLDWAMRMKVA 375
+ G C G ++ E+ G L +L + +LD + +
Sbjct: 110 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 169
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+A+G+AFL K + +HRD+ A N+LL + GL++ ++ + +
Sbjct: 170 YQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVK 222
Query: 436 GT----YGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
G ++APE ++ T +SDV+S+G+ L E+
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 293 GSRVAVKRLKRSSFQRK--KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
G VAVK + ++ ++ + E+ L+HPN+V + Y+V E+ G
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 351 PL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
+ D + H GR + R K ++ + + H K ++VHRD++A N+LLD +
Sbjct: 100 EVFDYLVAH----GRMKEKEARAKFRQIVS-AVQYCHQK---YIVHRDLKAENLLLDGDM 151
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ G S + V + G Y APE F + + DV+S GV+L
Sbjct: 152 NIKIADFGFSN--EFTVGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
EI A L+H N+V G + +Y+ E+ G L + P G A R
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF- 110
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
L G+ +LH + HRDI+ N+LLDE + GL+ + +
Sbjct: 111 -FHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 434 AGGTYGYLAPEFVYRNELTTKS-DVYSFGVLL 464
GT Y+APE + R E + DV+S G++L
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L + + + V E++ G L ++HI + D + A + G+
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHI-QSCHKFDLSRATFYAAEIILGLQ 132
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM--QERTVMAGGTYGYL 441
FLH K +V+RD++ N+LLD++ + G+ K E M +T GT Y+
Sbjct: 133 FLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNXFCGTPDYI 185
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + + D +SFGVLL E+
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEM 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 273 GNRLLGDSKTGGTYSGILPDGS-RVAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVA 329
G G Y I D + VAVK LK S+ ++E SE+ + L +H N+V
Sbjct: 55 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 114
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHH--------------IPRGGRSLDWAMRMKVA 375
+ G C G ++ E+ G L +L + +LD + +
Sbjct: 115 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 174
Query: 376 TTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG 435
+A+G+AFL K + +HRD+ A N+LL + GL++ + + A
Sbjct: 175 YQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE ++ T +SDV+S+G+ L E+
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 433 MAGGTYGYLAPEFVYRNE-LTTKSDVYSFGVLLLEI 467
T Y APE + + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 197
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 174
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGR---FARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G+ A+K L + + KE + ++ P LV ++ D+ + Y+V E+
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
G + H+ R GR + R A + +LH +++RD++ N+++D++
Sbjct: 126 GEM---FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQG 178
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K V + RT GT YLAPE + D ++ GVL+ E+
Sbjct: 179 YIQVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 296 VAVKRLKRSSFQRKKE-FYSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLD 353
VAVK LK S+ ++E SE+ + L +H N+V + G C G ++ E+ G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 354 RWLHH--------------IPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIR 399
+L + +LD + + +A+G+AFL K + +HRD+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 195
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGT----YGYLAPEFVYRNELTTKS 455
A N+LL + GL++ ++ + + G ++APE ++ T +S
Sbjct: 196 ARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 251
Query: 456 DVYSFGVLLLEI 467
DV+S+G+ L E+
Sbjct: 252 DVWSYGIFLWEL 263
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 14/172 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
VAVK ++R + + EI L HPN+V K I+ E+ G L
Sbjct: 48 VAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL--- 103
Query: 356 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM- 414
I GR + R L+ G+++ H + HRD++ N LLD L
Sbjct: 104 YERICNAGRFSEDEARFFFQQLLS-GVSYCHSM---QICHRDLKLENTLLDGSPAPRLKI 159
Query: 415 -GVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK-SDVYSFGVLL 464
G SK V+ + GT Y+APE + R E K +DV+S GV L
Sbjct: 160 CDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAV+ +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 95
Query: 348 VNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
G + D + H GR + R K ++ + + H K +VHRD++A N+LLD
Sbjct: 96 SGGEVFDYLVAH----GRMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 147
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ + G S + + G+ Y APE F + + DV+S GV+L
Sbjct: 148 ADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 115
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 433 MAGGTYGYLAPEFVYRNE-LTTKSDVYSFGVLLLEI 467
T Y APE + + +T D++S G + E+
Sbjct: 173 ----TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEM 204
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+ D+ T ++G ++ K L QR+K EI L H ++V G D
Sbjct: 34 ISDADTKEVFAG------KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFED 86
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+ ++V E R L + + ++L + G +LH + V+HR
Sbjct: 87 NDFVFVVLELCRR----RSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 139
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
D++ N+ L+E+ + GL+ V ++ ER + GT Y+APE + + + + D
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 457 VYSFGVLL 464
V+S G ++
Sbjct: 198 VWSIGCIM 205
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 88/230 (38%), Gaps = 30/230 (13%)
Query: 242 LSNPAASALVPPSWKVFTTEELRSITKNFSEGN----RLLGDSKTGGTYSGILPDGSRVA 297
+ PA S P + + + K+ GN RL+ D ++ VA
Sbjct: 1 MDRPAVSG--PMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSN----------ELVA 48
Query: 298 VKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLH 357
VK ++R + EI L HPN+V K IV E+ G L
Sbjct: 49 VKYIERGE-KIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL---FE 104
Query: 358 HIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM--G 415
I GR + R L G+++ H V HRD++ N LLD L
Sbjct: 105 RICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICD 160
Query: 416 VGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK-SDVYSFGVLL 464
G SK V+ + GT Y+APE + + E K +DV+S GV L
Sbjct: 161 FGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+ D+ T ++G ++ K L QR+K EI L H ++V G D
Sbjct: 36 ISDADTKEVFAG------KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFED 88
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+ ++V E R L + + ++L + G +LH + V+HR
Sbjct: 89 NDFVFVVLELCRR----RSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 141
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
D++ N+ L+E+ + GL+ V ++ +++T+ GT Y+APE + + + + D
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKGHSFEVD 199
Query: 457 VYSFGVLL 464
V+S G ++
Sbjct: 200 VWSIGCIM 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L + + + V E++ G L ++HI + D + A + G+
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHI-QSCHKFDLSRATFYAAEIILGLQ 133
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVM--QERTVMAGGTYGYL 441
FLH K +V+RD++ N+LLD++ + G+ K E M +T GT Y+
Sbjct: 134 FLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAKTNEFCGTPDYI 186
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + + D +SFGVLL E+
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEM 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 322 LHHPNLVAV-KGCCYDHGDR----YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT 376
HPN+V + C DR +V+E V + L +L +P G + M
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 377 TLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG 436
L +G+ FLH VVHRD++ N+L+ L GL++ +++ V+
Sbjct: 129 -LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--- 181
Query: 437 TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 107
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
+HP LV + C + V E+V G L + H+ R + + R A ++ +
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLAL 134
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK--FVPWEVMQERTVMAGGTYGY 440
+LH++ +++RD++ NVLLD E L G+ K P + T GT Y
Sbjct: 135 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT----TSXFCGTPNY 187
Query: 441 LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+APE + + D ++ GVL+ E+
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEM 214
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 109
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN++ +K + ++V++ + G L +L +L K+ L + I
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVIC 138
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLA 442
LH K ++VHRD++ N+LLD++ L G S + P E + R+V GT YLA
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--RSVC--GTPSYLA 191
Query: 443 PEFV 446
PE +
Sbjct: 192 PEII 195
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+ D+ T ++G ++ K L QR+K EI L H ++V G D
Sbjct: 40 ISDADTKEVFAG------KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFED 92
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+ ++V E R L + + ++L + G +LH + V+HR
Sbjct: 93 NDFVFVVLELCRR----RSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 145
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
D++ N+ L+E+ + GL+ V ++ +++T+ GT Y+APE + + + + D
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKGHSFEVD 203
Query: 457 VYSFGVLL 464
V+S G ++
Sbjct: 204 VWSIGCIM 211
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 107
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 107
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 110
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+ D+ T ++G ++ K L QR+K EI L H ++V G D
Sbjct: 36 ISDADTKEVFAG------KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFED 88
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+ ++V E R L + + ++L + G +LH + V+HR
Sbjct: 89 NDFVFVVLELCRR----RSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 141
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
D++ N+ L+E+ + GL+ V ++ +++T+ GT Y+APE + + + + D
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKGHSFEVD 199
Query: 457 VYSFGVLL 464
V+S G ++
Sbjct: 200 VWSIGCIM 207
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+ D+ T ++G ++ K L QR+K EI L H ++V G D
Sbjct: 58 ISDADTKEVFAG------KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFED 110
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+ ++V E R L + + ++L + G +LH + V+HR
Sbjct: 111 NDFVFVVLELCRR----RSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 163
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
D++ N+ L+E+ + GL+ V ++ ER + GT Y+APE + + + + D
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 457 VYSFGVLL 464
V+S G ++
Sbjct: 222 VWSIGCIM 229
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 109
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 111
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 110
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 112
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 113 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 170 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 107
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 107
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 111
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAVK +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQK---LFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYA 95
Query: 348 VNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
G + D + H GR + R K ++ + + H K +VHRD++A N+LLD
Sbjct: 96 SGGEVFDYLVAH----GRXKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 147
Query: 407 EEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLL 464
+ + G S + + G Y APE F + + DV+S GV+L
Sbjct: 148 ADXNIKIADFGFSNEFTF---GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 110
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 109
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 109
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 293 GSRVAVKRL---KRSSFQRKKEFYSEIGRFARLHHPNLVA-----VKGCCYDHGDRYIVY 344
G +VAVK + +S+ R+ E Y + + H N++ +KG Y++
Sbjct: 60 GEKVAVKVFFTTEEASWFRETEIYQTV----LMRHENILGFIAADIKGTG-SWTQLYLIT 114
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ NG L +L +LD +K+A + G+ LH ++ KP + HRD++
Sbjct: 115 DYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 400 ASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTVMAG---GTYGYLAPEF----VYRNEL 451
+ N+L+ + + +GL+ KF+ E + GT Y+ PE + RN
Sbjct: 170 SKNILVKKNGTCCIADLGLAVKFI--SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 452 TT--KSDVYSFGVLLLEI 467
+ +D+YSFG++L E+
Sbjct: 228 QSYIMADMYSFGLILWEV 245
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
+HP LV + C + V E+V G L + H+ R + + R A ++ +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLAL 166
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK--FVPWEVMQERTVMAGGTYGY 440
+LH++ +++RD++ NVLLD E L G+ K P + T GT Y
Sbjct: 167 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT----TSTFCGTPNY 219
Query: 441 LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+APE + + D ++ GVL+ E+
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEM 246
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPL--PLIKSY 109
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 110 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 115
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 173 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 204
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGR---FARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G+ A+K L + + KE + ++ P LV ++ D+ + Y+V E+
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
G + H+ R GR + R A + +LH +++RD++ N+++D++
Sbjct: 126 GEM---FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQG 178
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ GL+K V + RT GT YLAPE + D ++ GVL+ E+
Sbjct: 179 YIKVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 322 LHHPNLVAV-KGCCYDHGDR----YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT 376
HPN+V + C DR +V+E V + L +L +P G + M
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 377 TLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG 436
L +G+ FLH VVHRD++ N+L+ L GL++ +++ V+
Sbjct: 129 -LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--- 181
Query: 437 TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD 336
+ D+ T ++G ++ K L QR+K EI L H ++V G D
Sbjct: 60 ISDADTKEVFAG------KIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFHGFFED 112
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+ ++V E R L + + ++L + G +LH + V+HR
Sbjct: 113 NDFVFVVLELCRR----RSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHR 165
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSD 456
D++ N+ L+E+ + GL+ V ++ ER + GT Y+APE + + + + D
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 457 VYSFGVLL 464
V+S G ++
Sbjct: 224 VWSIGCIM 231
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
L+H N+V G + +Y+ E+ G L DR I G A R L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRF--FHQLMA 116
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
G+ +LH + HRDI+ N+LLDE + GL+ + + GT Y
Sbjct: 117 GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 441 LAPEFVYRNELTTKS-DVYSFGVLL 464
+APE + R E + DV+S G++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
L+H N+V G + +Y+ E+ G L DR I G A R L
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRF--FHQLMA 115
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
G+ +LH + HRDI+ N+LLDE + GL+ + + GT Y
Sbjct: 116 GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 441 LAPEFVYRNELTTKS-DVYSFGVLL 464
+APE + R E + DV+S G++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPL--PLIKSY 111
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 117
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 118 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 322 LHHPNLVAV-KGCCYDHGDR----YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT 376
HPN+V + C DR +V+E V + L +L +P G + M
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 377 TLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG 436
L +G+ FLH VVHRD++ N+L+ L GL++ +++ V+
Sbjct: 129 -LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--- 181
Query: 437 TYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 297 AVKRLKRSSFQRKKE---FYSEIGRFAR-LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
AVK L++ + +KKE SE + + HP LV + Y V +++ G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
+H+ R L+ R A +A + +LH ++V+RD++ N+LLD +
Sbjct: 127 ---FYHLQRERCFLEPRARF-YAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIV 179
Query: 413 LMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
L GL K E ++ + + GT YLAPE +++ D + G +L E+
Sbjct: 180 LTDFGLCK----ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 232
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
L+H N+V G + +Y+ E+ G L DR I G A R L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRF--FHQLMA 116
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
G+ +LH + HRDI+ N+LLDE + GL+ + + GT Y
Sbjct: 117 GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 441 LAPEFVYRNELTTKS-DVYSFGVLL 464
+APE + R E + DV+S G++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
L+H N+V G + +Y+ E+ G L DR I G A R L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRF--FHQLMA 116
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
G+ +LH + HRDI+ N+LLDE + GL+ + + GT Y
Sbjct: 117 GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 441 LAPEFVYRNELTTKS-DVYSFGVLL 464
+APE + R E + DV+S G++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
L+H N+V G + +Y+ E+ G L DR I G A R L
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRF--FHQLMA 116
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
G+ +LH + HRDI+ N+LLDE + GL+ + + GT Y
Sbjct: 117 GVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 441 LAPEFVYRNELTTKS-DVYSFGVLL 464
+APE + R E + DV+S G++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 115
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 116 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVL 196
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 293 GSRVAVKRLKRSSFQRK--KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
G VA+K + ++ ++ + E+ L+HPN+V + Y++ E+ G
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 96
Query: 351 PL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
+ D + H GR + R K ++ + + H K +VHRD++A N+LLD +
Sbjct: 97 EVFDYLVAH----GRMKEKEARSKFRQIVS-AVQYCHQK---RIVHRDLKAENLLLDADM 148
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAG-----GTYGYLAPE-FVYRNELTTKSDVYSFGVL 463
+ G S E TV G+ Y APE F + + DV+S GV+
Sbjct: 149 NIKIADFGFS--------NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 200
Query: 464 L 464
L
Sbjct: 201 L 201
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 25/181 (13%)
Query: 293 GSRVAVKRLKRSSFQRK--KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
G VA+K + ++ ++ + E+ L+HPN+V + Y++ E+ G
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 351 PL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
+ D + H GR + R K ++ + + H K +VHRD++A N+LLD +
Sbjct: 100 EVFDYLVAH----GRMKEKEARSKFRQIVS-AVQYCHQK---RIVHRDLKAENLLLDADM 151
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAG-----GTYGYLAPE-FVYRNELTTKSDVYSFGVL 463
+ G S E TV G Y APE F + + DV+S GV+
Sbjct: 152 NIKIADFGFS--------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 464 L 464
L
Sbjct: 204 L 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 117
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 118 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 117
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 118 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVL 198
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV---PWEVMQERTVMA 434
+A+G+ FL + +HRD+ A N+LL E + GL++ + P V + T +
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 435 GGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
++APE ++ +TKSDV+S+GVLL EI
Sbjct: 265 ---LKWMAPESIFDKIYSTKSDVWSYGVLLWEI 294
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 374 VATTLAQ---GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQE 429
+AT L + G+ +LH + K +HRDI+A+NVLL E+ L G++ + ++ +
Sbjct: 118 IATILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 174
Query: 430 RTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
V GT ++APE + ++ K+D++S G+ +E+
Sbjct: 175 XFV---GTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
AP + D ++ GVL+ E+
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 112
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 113 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 170 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 201
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
+HP LV + C + V E+V G L + H+ R + + R A ++ +
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLAL 119
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK--FVPWEVMQERTVMAGGTYGY 440
+LH++ +++RD++ NVLLD E L G+ K P + T GT Y
Sbjct: 120 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT----TSXFCGTPNY 172
Query: 441 LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+APE + + D ++ GVL+ E+
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEM 199
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L+H N+V G + +Y+ E+ G L + P G A R L G
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRF--FHQLMAG 116
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+ +LH + HRDI+ N+LLDE + GL+ + + GT Y+
Sbjct: 117 VVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 442 APEFVYRNELTTKS-DVYSFGVLL 464
APE + R E + DV+S G++L
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVL 197
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 323 HHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGI 382
+HP LV + C + V E+V G L + H+ R R L + ++ +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQ-RKLPEEHARFYSAEISLAL 123
Query: 383 AFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSK--FVPWEVMQERTVMAGGTYGY 440
+LH++ +++RD++ NVLLD E L G+ K P + T GT Y
Sbjct: 124 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT----TSXFCGTPNY 176
Query: 441 LAPEFVYRNELTTKSDVYSFGVLLLEI 467
+APE + + D ++ GVL+ E+
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEM 203
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 82/207 (39%), Gaps = 28/207 (13%)
Query: 265 SITKNFSEGN----RLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFA 320
+ K+ GN RL+ D ++ VAVK ++R + + EI
Sbjct: 21 ELVKDIGSGNFGVARLMRDKQSN----------ELVAVKYIERGE-KIDENVKREIINHR 69
Query: 321 RLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ 380
L HPN+V K IV E+ G L I GR + R L
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGEL---FERICNAGRFSEDEARF-FFQQLIS 125
Query: 381 GIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM--GVGLSKFVPWEVMQERTVMAGGTY 438
G+++ H V HRD++ N LLD L G SK V+ + GT
Sbjct: 126 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTP 179
Query: 439 GYLAPEFVYRNELTTK-SDVYSFGVLL 464
Y+APE + + E K +DV+S GV L
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L +++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG++F H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E++ G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E++ G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 134
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 189
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEM 211
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L ++ G L +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKDFMDASALTGIPL--PLIKSY 108
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 109 LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 197
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 130
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP---FAWCAPES 185
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEM 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 40/184 (21%)
Query: 299 KRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYD------HGDRYIVY--EFVVNG 350
++L +S QR F E L HPN+V YD G + IV E +G
Sbjct: 62 RKLTKSERQR---FKEEAEXLKGLQHPNIVRF----YDSWESTVKGKKCIVLVTELXTSG 114
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATT----LAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
L +L ++KV + + +G+ FLH + P ++HRD++ N+ +
Sbjct: 115 TLKTYLKRFK--------VXKIKVLRSWCRQILKGLQFLHTRTPP-IIHRDLKCDNIFIT 165
Query: 407 EEFGAHLMG-VGLSKFVPWEVMQERTVMAG---GTYGYLAPEFVYRNELTTKSDVYSFGV 462
G+ +G +GL+ +R A GT + APE Y + DVY+FG
Sbjct: 166 GPTGSVKIGDLGLATL-------KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGX 217
Query: 463 LLLE 466
LE
Sbjct: 218 CXLE 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L ++ G L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKTFMDASALTGIPL--PLIKSY 111
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+E V+ L +++ G L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEH-VDQDLKKFMDASALTGIPL--PLIKSY 111
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP+++ + ++V++ + G L +L +L + +L + ++
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVS 214
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLS-KFVPWEVMQERTVMAGGTYGYLA 442
FLH ++VHRD++ N+LLD+ L G S P E ++E GT GYLA
Sbjct: 215 FLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE----LCGTPGYLA 267
Query: 443 PEFV 446
PE +
Sbjct: 268 PEIL 271
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 276 LLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARL-HHPNLVAVKGCC 334
L+G+ G Y G ++A ++ + ++E EI + HH N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 335 YDHG------DRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDK 388
++V EF G + + + G +L + + +G++ LH
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 389 VKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYR 448
+ V+HRDI+ NVLL E L+ G+S + V + T + GT ++APE +
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI--GTPYWMAPEVIAC 203
Query: 449 NE-----LTTKSDVYSFGVLLLEI 467
+E KSD++S G+ +E+
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEM 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 174
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + T GT YL
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGATWTLCGTPEYL 226
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 117
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 118 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 172
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2AFP|A Chain A, The Solution Structure Of Type Ii Antifreeze Protein
Reveals A New Member Of The Lectin Family
Length = 129
Score = 46.2 bits (108), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP W +C Y +W +ET C ++GGHLA++ S EE Q L N
Sbjct: 7 CPAGW--QPLGDRCIYYETTAMTWALAETNCMKLGGHLASIHSQEEHSFIQTL---NAGV 61
Query: 113 CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGS 172
W+GG S G +W WSD +F S C++ P V A + + +
Sbjct: 62 VWIGG-SACLQAG-AWTWSDGTPM---------NFRSWCSTKPDDVLAACCM-QMTAAAD 109
Query: 173 RSLVTERCNTSHPFIC 188
+ C SH +C
Sbjct: 110 QCWDDLPCPASHKSVC 125
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 117
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 118 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 172
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHG--DRYIVYEFVVNG 350
G VA+K++ + R +E + A LHHPN+V ++ Y G DR +Y VV
Sbjct: 48 GMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKP---------HVVHRDIRAS 401
+ LH R R +VA FL ++ +V HRDI+
Sbjct: 107 YVPDTLHRCCRN------YYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPH 160
Query: 402 NVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNE-LTTKSDVYS 459
NVL++E G L G +K + E V + Y APE ++ N+ TT D++S
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKL---SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWS 217
Query: 460 FGVLLLEIRL 469
G + E+ L
Sbjct: 218 VGCIFAEMML 227
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 116
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 117 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 171
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 117
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 118 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 172
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+V G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+L+D++ + G +K V + RT GT L
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEAL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L ++ G L +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPL--PLIKSY 110
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 111 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 168 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+EF ++ L ++ G L +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPL--PLIKSY 111
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 112 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 169 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 200
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 277 LGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQ-RKKEFYSEIGRFARLHHPNLVAVKGCC 334
LG+ Y G+ G VA+K +K S + EI L H N+V +
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGG--RSLDWAMRMKVATTLAQGIAFLHDKVKPH 392
+ +V+EF+ N L +++ G R L+ + L QG+AF H+
Sbjct: 73 HTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---K 128
Query: 393 VVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVYRNE 450
++HRD++ N+L+++ L GL++ +P V T Y AP+ + +
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV----TLWYRAPDVLMGSR 184
Query: 451 -LTTKSDVYSFGVLLLEI 467
+T D++S G +L E+
Sbjct: 185 TYSTSIDIWSCGCILAEM 202
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 130
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 185
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEM 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 268 KNFSEGNRLLGDSKTGGTYSGILP--DGS--RVAVKRLKRSSFQRK--KEFYSEIGRFAR 321
+ F+ G R+LG + G L DGS +VAVK LK +EF E
Sbjct: 23 QQFTLG-RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE 81
Query: 322 LHHPNLVAVKGCCYDHGDR------YIVYEFVVNGPLDRWL--HHIPRGGRSLDWAMRMK 373
HP++ + G + ++ F+ +G L +L I +L ++
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+A G+ +L + + +HRD+ A N +L E+ + GLS+ + +
Sbjct: 142 FMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
+ +LA E + N T SDV++FGV + EI
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 123
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 124 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 178
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 134
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 189
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEM 211
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L HP++V + G Y+V+EF+ L + G A+ + +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG-- 439
+ + HD +++HRD++ NVLL + + V L F + E ++AGG G
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENS--APVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 440 -YLAPEFVYRNELTTKSDVYSFGVLLL 465
++APE V R DV+ GV+L
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 130
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 185
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEM 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 256
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 257 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 311
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G +VA+K L +S Q + E EI L HP+++ + + +V E+
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
N D + + R S A R + + + H + +VHRD++ N+LLDE
Sbjct: 96 GNELFD---YIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRDLKPENLLLDE 147
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVY-RNELTTKSDVYSFGVLL 464
+ GLS +M + + G+ Y APE + + + DV+S GV+L
Sbjct: 148 HLNVKIADFGLS-----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
Query: 465 LEIRLVLCRR 474
++LCRR
Sbjct: 203 Y---VMLCRR 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G +VA+K L +S Q + E EI L HP+++ + + +V E+
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 96
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
N D + + R S A R + + + H + +VHRD++ N+LLDE
Sbjct: 97 GNELFD---YIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRDLKPENLLLDE 148
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVY-RNELTTKSDVYSFGVLL 464
+ GLS +M + + G+ Y APE + + + DV+S GV+L
Sbjct: 149 HLNVKIADFGLSN-----IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
Query: 465 LEIRLVLCRR 474
++LCRR
Sbjct: 204 Y---VMLCRR 210
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL-DRWLHHIPRGGRSLDWAMRM 372
+EI +L+HP ++ +K +D D YIV E + G L D+ + G + L A
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATCK 242
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
+ + +LH+ ++HRD++ NVLL + L + ++ F +++ E ++
Sbjct: 243 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSL 297
Query: 433 MAG--GTYGYLAPEF---VYRNELTTKSDVYSFGVLLL 465
M GT YLAPE V D +S GV+L
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G +VA+K L +S Q + E EI L HP+++ + + +V E+
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 86
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
N D + + R S A R + + + H + +VHRD++ N+LLDE
Sbjct: 87 GNELFD---YIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRDLKPENLLLDE 138
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVY-RNELTTKSDVYSFGVLL 464
+ GLS +M + + G+ Y APE + + + DV+S GV+L
Sbjct: 139 HLNVKIADFGLS-----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
Query: 465 LEIRLVLCRR 474
++LCRR
Sbjct: 194 Y---VMLCRR 200
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 313 YSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
+ ++ R AR L HPN+V + + G Y+V++ V G L + + ++
Sbjct: 74 HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREY 126
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF-VPWEVM 427
+ + Q + ++ + +VHRD++ N+LL + V L+ F + EV
Sbjct: 127 YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKG--AAVKLADFGLAIEVQ 184
Query: 428 QERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
E+ G GT GYL+PE + ++ D+++ GV+L
Sbjct: 185 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L +
Sbjct: 39 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--F 93
Query: 356 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 415
+ R S A + + IA+ H +VHR+++ N+LL + A
Sbjct: 94 EDIVAREFYS--EADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAA 146
Query: 416 VGLSKF-VPWEVMQERTVMA-GGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
V L+ F + EV GT GYL+PE + ++ + D+++ GV+L
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L +
Sbjct: 39 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--F 93
Query: 356 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 415
+ R S A + + IA+ H +VHR+++ N+LL + A
Sbjct: 94 EDIVAREFYS--EADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAA 146
Query: 416 VGLSKF-VPWEVMQERTVMA-GGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
V L+ F + EV GT GYL+PE + ++ + D+++ GV+L
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L +
Sbjct: 38 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--F 92
Query: 356 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 415
+ R S A + + IA+ H +VHR+++ N+LL + A
Sbjct: 93 EDIVAREFYS--EADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAA 145
Query: 416 VGLSKF-VPWEVMQERTVMA-GGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
V L+ F + EV GT GYL+PE + ++ + D+++ GV+L
Sbjct: 146 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G +VA+K L +S Q + E EI L HP+++ + + +V E+
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 90
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
N D + + R S A R + + + H + +VHRD++ N+LLDE
Sbjct: 91 GNELFD---YIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRDLKPENLLLDE 142
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVY-RNELTTKSDVYSFGVLL 464
+ GLS +M + + G+ Y APE + + + DV+S GV+L
Sbjct: 143 HLNVKIADFGLS-----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
Query: 465 LEIRLVLCRR 474
++LCRR
Sbjct: 198 Y---VMLCRR 204
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
+ K+L FQ K E + I R +L HPN+V + + Y+V++ V G L +
Sbjct: 62 INTKKLSARDFQ-KLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--F 116
Query: 356 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMG 415
+ R S A + + IA+ H +VHR+++ N+LL + A
Sbjct: 117 EDIVAREFYS--EADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAA 169
Query: 416 VGLSKF-VPWEVMQERTVMA-GGTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
V L+ F + EV GT GYL+PE + ++ + D+++ GV+L
Sbjct: 170 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 153
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P LV ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 140
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP---FAWCAPES 195
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEM 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 21/202 (10%)
Query: 277 LGDSKTGGTYSG--ILPDGS--RVAVKRLKRSSFQRKK---EFYSEIGRFARLHHPNLVA 329
LGD G G P G VAVK LK + + +F E+ L H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 330 VKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV 389
+ G + + + LDR H G L + + A +A+G+ +L K
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLS-RYAVQVAEGMGYLESK- 140
Query: 390 KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE----VMQERTVMAGGTYGYLAPEF 445
+HRD+ A N+LL + GL + +P VMQE + + + APE
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 195
Query: 446 VYRNELTTKSDVYSFGVLLLEI 467
+ + SD + FGV L E+
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEM 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 318 RFARLHHPNLVAVKG-CCYDHGDRYIVYEFV---VNGPLDRWLHHIPRGGRSLDWAMRMK 373
R HPN+V + C DR I V V+ L +L P G L
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKD 116
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ +G+ FLH +VHRD++ N+L+ L GL++ +++ + V+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 174 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 293 GSRVAVK-----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFV 347
G VAVK +L SS Q+ + E+ L+HPN+V + Y+V E+
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQK---LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYA 88
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQ---GIAFLHDKVKPHVVHRDIRASNVL 404
G + +L + G W + Q + + H K +VHRD++A N+L
Sbjct: 89 SGGEVFDYL--VAHG-----WMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLL 138
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVL 463
LD + + G S + + G+ Y APE F + + DV+S GV+
Sbjct: 139 LDADMNIKIADFGFSNEFTF---GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 195
Query: 464 L 464
L
Sbjct: 196 L 196
>pdb|2ZIB|A Chain A, Crystal Structure Analysis Of Calcium-Independent Type Ii
Antifreeze Protein
Length = 133
Score = 45.4 bits (106), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP W ++ ++ CF +WD +E C GGHLA++ S EE+ + + V
Sbjct: 10 CPAGWTLHGQR--CFYSEATAMTWDLAEANCVNKGGHLASIHSLEEQLYIKDIVAGIV-- 65
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+GG + V +W W+D
Sbjct: 66 -WIGGSACK--VAGAWSWTD 82
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 333 CCYDHGDRY-IVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAF 384
Y G++ +VY +N LD R H R ++L L + +A+
Sbjct: 81 FFYSSGEKKDVVY---LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 385 LHDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAP 443
+H + HRDI+ N+LLD + L G +K + V E V + Y AP
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAP 191
Query: 444 EFVY-RNELTTKSDVYSFGVLLLEIRL 469
E ++ + T+ DV+S G +L E+ L
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 81 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPE 192
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 81 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPE 192
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P L ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFXEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 82 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 140 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPE 193
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLL 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 272 EGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVK 331
E L+G + G Y G + + ++R + + K F E+ + + H N+V
Sbjct: 36 EIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 332 GCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGR-SLDWAMRMKVATTLAQGIAFLHDKVK 390
G C I+ R L+ + R + LD ++A + +G+ +LH K
Sbjct: 96 GACMSPPHLAIITSLCKG----RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK-- 149
Query: 391 PHVVHRDIRASNVLLDE------EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
++H+D+++ NV D +FG +S + +++ + G +LAPE
Sbjct: 150 -GILHKDLKSKNVFYDNGKVVITDFGL----FSISGVLQAGRREDKLRIQNGWLCHLAPE 204
Query: 445 FVYRNELTTK---------SDVYSFGVLLLEIRLVLCRRW 475
+ + T+ SDV++ G + E+ R W
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH---AREW 241
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 416
+H+ + G + MR A + G+ +H++ VV+RD++ +N+LLDE + +
Sbjct: 281 YHLSQHGVFSEADMRFYAAEIIL-GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336
Query: 417 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEI 467
GL+ + +++ + GT+GY+APE + + + +D +S G +L ++
Sbjct: 337 GLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 416
+H+ + G + MR A + G+ +H++ VV+RD++ +N+LLDE + +
Sbjct: 281 YHLSQHGVFSEADMRFYAAEIIL-GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336
Query: 417 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEI 467
GL+ + +++ + GT+GY+APE + + + +D +S G +L ++
Sbjct: 337 GLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 416
+H+ + G + MR A + G+ +H++ VV+RD++ +N+LLDE + +
Sbjct: 280 YHLSQHGVFSEADMRFYAAEIIL-GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 335
Query: 417 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEI 467
GL+ + +++ + GT+GY+APE + + + +D +S G +L ++
Sbjct: 336 GLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 383
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 313 YSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
+ ++ R AR L HPN+V + + G Y++++ V G L + + R ++
Sbjct: 65 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI--VAR-----EY 117
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF-VPWEVM 427
+ + Q + + + VVHRD++ N+LL + V L+ F + EV
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKG--AAVKLADFGLAIEVE 175
Query: 428 QERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFGVLL 464
E+ G GT GYL+PE + ++ D+++ GV+L
Sbjct: 176 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGV 416
+H+ + G + MR A + G+ +H++ VV+RD++ +N+LLDE + +
Sbjct: 281 YHLSQHGVFSEADMRFYAAEIIL-GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336
Query: 417 GLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRN-ELTTKSDVYSFGVLLLEI 467
GL+ + +++ + GT+GY+APE + + + +D +S G +L ++
Sbjct: 337 GLA----CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 101 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 159 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPEL 212
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLL 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 90 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 148 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPEL 201
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLL 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 314 SEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMK 373
+EI +LHHP L+ + D + ++ EF+ G L I + A +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVIN 153
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA--HLMGVGL-SKFVPWEVMQER 430
+G+ +H+ +VH DI+ N++ + + + ++ GL +K P E+++
Sbjct: 154 YMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT 210
Query: 431 TVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
T A + APE V R + +D+++ GVL
Sbjct: 211 TATA----EFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 318 RFARLHHPNLVAVKG-CCYDHGDRYIVYEFV---VNGPLDRWLHHIPRGGRSLDWAMRMK 373
R HPN+V + C DR I V V+ L +L P G L
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKD 116
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ +G+ FLH +VHRD++ N+L+ L GL++ +++ V+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 174 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 85 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 143 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPE 196
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLL 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 318 RFARLHHPNLVAVKG-CCYDHGDRYIVYEFV---VNGPLDRWLHHIPRGGRSLDWAMRMK 373
R HPN+V + C DR I V V+ L +L P G L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKD 124
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ +G+ FLH +VHRD++ N+L+ L GL++ +++ V+
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 182 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 94 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 152 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPEL 205
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLL 230
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKV 374
EI L+HPN+V + + Y+V+E V+ L ++ G L +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEH-VHQDLKTFMDASALTGIPL--PLIKSY 107
Query: 375 ATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTV 432
L QG+AF H V+HRD++ N+L++ E L GL++ VP V
Sbjct: 108 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 433 MAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI 467
T Y APE + +T D++S G + E+
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196
>pdb|1FVU|B Chain B, Crystal Structure Of Botrocetin
pdb|1FVU|D Chain D, Crystal Structure Of Botrocetin
pdb|1IJK|C Chain C, The Von Willebrand Factor Mutant (I546v) A1 Domain-
Botrocetin Complex
pdb|1U0N|C Chain C, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
pdb|1U0O|B Chain B, The Mouse Von Willebrand Factor A1-Botrocetin Complex
Length = 125
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKNV 110
CPPDW + + C+ + + WD++E +C E G HL + S EE + L + +
Sbjct: 2 CPPDW--SSYEGHCYRFFKEWMHWDDAEEFCTEQQTGAHLVSFQSKEEADFVRSLTSEML 59
Query: 111 NG--CWVGGRSINTTVGLSWKWSDNM 134
G W+G + ++W+D M
Sbjct: 60 KGDVVWIGLSDVWNKC--RFEWTDGM 83
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 94 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 152 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPEL 205
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLL 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HPN+V + +D ++V E + G L + + + + L ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVS 120
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEE---FGAHLMGVGLSKFVPWEVMQERTVMAGGTYGY 440
+HD VVHRD++ N+L +E ++ G ++ P + +T T Y
Sbjct: 121 HMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHY 175
Query: 441 LAPEFVYRNELTTKSDVYSFGVLL 464
APE + +N D++S GV+L
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVIL 199
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 81 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPE 192
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYE 345
+P G A K + + + ++ R AR L HPN+V + + G Y+V++
Sbjct: 26 IPTGQEYAAKIINTKKLSARD--HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
V G L + + R ++ + + Q + ++ +VHRD++ N+LL
Sbjct: 84 LVTGGEL--FEDIVAR-----EYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 406 -DEEFGAHLMGVGLSKF-VPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFG 461
+ GA V L+ F + EV ++ G GT GYL+PE + ++ D+++ G
Sbjct: 137 ASKSKGA---AVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 462 VLL 464
V+L
Sbjct: 194 VIL 196
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 292 DGSRVAVKRLKRSSFQRKKE-FYSEIGRFARLHHPNLVAVKGCCYDHGDR---------- 340
D A+KR++ + + +E E+ A+L HP +V +
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 341 --YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMR---MKVATTLAQGIAFLHDKVKPHVVH 395
YI + L W++ G +++ R + + +A+ + FLH K ++H
Sbjct: 89 YLYIQMQLCRKENLKDWMN----GRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMH 141
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG-----------GTYGYLAPE 444
RD++ SN+ + + GL + + +E+TV+ GT Y++PE
Sbjct: 142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQD-EEEQTVLTPMPAYARHTGQVGTKLYMSPE 200
Query: 445 FVYRNELTTKSDVYSFGVLLLEI 467
++ N + K D++S G++L E+
Sbjct: 201 QIHGNSYSHKVDIFSLGLILFEL 223
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P L ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
++ P L ++ D+ + Y+V E+ G + H+ R GR + R A +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM---FSHLRRIGRFSEPHARF-YAAQIVLT 154
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYL 441
+LH +++RD++ N+++D++ + G +K V + RT GT YL
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + D ++ GVL+ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFAR----LHHPNLVAVKGCCYDHGDRYIVYE 345
+P G A K + + + ++ R AR L HPN+V + + G Y+V++
Sbjct: 26 IPTGQEYAAKIINTKKLSARD--HQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
V G L + + ++ + + Q + ++ +VHRD++ N+LL
Sbjct: 84 LVTGGELFEDI-------VAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 406 -DEEFGAHLMGVGLSKF-VPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFG 461
+ GA V L+ F + EV ++ G GT GYL+PE + ++ D+++ G
Sbjct: 137 ASKSKGA---AVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 462 VLL 464
V+L
Sbjct: 194 VIL 196
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ + + +E +I R +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL--QIMR--KLDHCNIVRLRY 80
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 81 FFYSSGEKKD--EVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPE 192
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 116 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 174 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPEL 227
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLL 252
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 87 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 145 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPEL 198
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLL 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 18/197 (9%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G VA+KR++ + EI LHHPN+V++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT-TLAQGIAFLHDKVKPHV 393
+ +V+EF +++ L + ++ ++K+ L +G+A H +
Sbjct: 89 HSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 394 VHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVY-RNE 450
+HRD++ N+L++ + L GL++ +P V T Y AP+ + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKK 196
Query: 451 LTTKSDVYSFGVLLLEI 467
+T D++S G + E+
Sbjct: 197 YSTSVDIWSIGCIFAEM 213
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 18/197 (9%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G VA+KR++ + EI LHHPN+V++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVAT-TLAQGIAFLHDKVKPHV 393
+ +V+EF +++ L + ++ ++K+ L +G+A H +
Sbjct: 89 HSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 394 VHRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVY-RNE 450
+HRD++ N+L++ + L GL++ +P V T Y AP+ + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMGSKK 196
Query: 451 LTTKSDVYSFGVLLLEI 467
+T D++S G + E+
Sbjct: 197 YSTSVDIWSIGCIFAEM 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 372 MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERT 431
+ + +A+ + FLH K ++HRD++ SN+ + + GL + + +E+T
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE-EEQT 222
Query: 432 VMAG-----------GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
V+ GT Y++PE ++ N + K D++S G++L E+
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 95 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 153 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPEL 206
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLL 231
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 110 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 168 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPEL 221
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLL 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ + + +E +I R +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL--QIMR--KLDHCNIVRLRY 80
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 81 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPE 192
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEF---YSEIG 317
+T N E +LLG GT+ ++ G A+K LK+ K E +E
Sbjct: 148 VTMNEFEYLKLLGK----GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATT 377
HP L A+K H V E+ G L H+ R R
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-RVFSEDRARFYGAE 259
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG-- 435
+ + +LH + +VV+RD++ N++LD++ + GL K E +++ M
Sbjct: 260 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFC 313
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
GT YLAPE + N+ D + GV++ E+ +C R
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 22/206 (10%)
Query: 274 NRLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+++G+ G Y L D G VA+K++ + + +E +I R +L H N+V ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL--QIMR--KLDHCNIVRLRY 80
Query: 333 CCYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFL 385
Y G++ E +N LD R H R ++L L + +A++
Sbjct: 81 FFYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 386 HDKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPE 444
H + HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPE 192
Query: 445 FVY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEF---YSEIG 317
+T N E +LLG GT+ ++ G A+K LK+ K E +E
Sbjct: 145 VTMNEFEYLKLLGK----GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATT 377
HP L A+K H V E+ G L H+ R R
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-RVFSEDRARFYGAE 256
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG-- 435
+ + +LH + +VV+RD++ N++LD++ + GL K E +++ M
Sbjct: 257 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKTFC 310
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
GT YLAPE + N+ D + GV++ E+ +C R
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 346
>pdb|1DV8|A Chain A, Crystal Structure Of The Carbohydrate Recognition Domain
Of The H1 Subunit Of The Asialoglycoprotein Receptor
Length = 128
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP +W+ E + C+ + + ++W +++ YC+ HL +TS+EE+ Q G VN
Sbjct: 1 CPVNWV--EHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGP-VN- 56
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G N WKW D
Sbjct: 57 TWMGLHDQNG----PWKWVD 72
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 32/183 (17%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG-PLDRWLHHIPRGGRSLDWAMRMK 373
EI +R+ H N++ V + G +V E +G L ++ PR LD +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR----LDEPLASY 134
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ L + +L K ++HRDI+ N+++ E+F L+ G + ++ ER +
Sbjct: 135 IFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL------ERGKL 185
Query: 434 AG---GTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEIRLVLCRRWWTLYTLVHSMSLLC 489
GT Y APE + N +++S GV TLYTLV + C
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV--------------TLYTLVFEENPFC 231
Query: 490 AQE 492
E
Sbjct: 232 ELE 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 318 RFARLHHPNLVAVKG-CCYDHGDRYIVYEFV---VNGPLDRWLHHIPRGGRSLDWAMRMK 373
R HPN+V + C DR I V V+ L +L P G L
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKD 116
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVM 433
+ +G+ FLH +VHRD++ N+L+ L GL++ +++ V+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 434 AGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEI 467
T Y APE + ++ T D++S G + E+
Sbjct: 174 ---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 293 GSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRY--IVYEFVV 348
G+ + VK LK S ++ ++F E R HPN++ V G C + ++ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L LH +D + +K A A+G AFLH ++P + + + +V +DE+
Sbjct: 93 YGSLYNVLHE--GTNFVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDED 149
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAGGTY--GYLAPEFVYRNELTTK---SDVYSFGVL 463
A + + KF G Y ++APE + + T +D +SF VL
Sbjct: 150 XTARISXADV-KF--------SFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVL 200
Query: 464 LLEI 467
L E+
Sbjct: 201 LWEL 204
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 293 GSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHG---DRYIVY 344
G VAVK R +RS F R+ E Y + L H N++ + D+G ++V
Sbjct: 27 GEEVAVKIFSSREERSWF-REAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVS 81
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ +G L +L+ + +K+A + A G+A LH ++ KP + HRD++
Sbjct: 82 DYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 136
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRN------ 449
+ N+L+ + + +GL+ V + + +A GT Y+APE + +
Sbjct: 137 SKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 194
Query: 450 ELTTKSDVYSFGVLLLEI 467
E ++D+Y+ G++ EI
Sbjct: 195 ESFKRADIYAMGLVFWEI 212
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 116 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 174 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPEL 227
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLL 252
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 334 CYDHGDRY------IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
Y G++ +V ++V + R H R ++L L + +A++H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 388 KVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFV 446
+ HRDI+ N+LLD + L G +K + V E V + Y APE +
Sbjct: 177 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELI 230
Query: 447 Y-RNELTTKSDVYSFGVLLLEIRL 469
+ + T+ DV+S G +L E+ L
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLL 254
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 293 GSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHG---DRYIVY 344
G VAVK R +RS F R+ E Y + L H N++ + D+G ++V
Sbjct: 26 GEEVAVKIFSSREERSWF-REAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVS 80
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ +G L +L+ + +K+A + A G+A LH ++ KP + HRD++
Sbjct: 81 DYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRN------ 449
+ N+L+ + + +GL+ V + + +A GT Y+APE + +
Sbjct: 136 SKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 193
Query: 450 ELTTKSDVYSFGVLLLEI 467
E ++D+Y+ G++ EI
Sbjct: 194 ESFKRADIYAMGLVFWEI 211
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 282 TGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRY 341
G Y+ ++ + K+L Q K E + I R L HPN+V + + G Y
Sbjct: 35 AGQEYAAMI-----INTKKLSARDHQ-KLEREARICRL--LKHPNIVRLHDSISEEGHHY 86
Query: 342 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRAS 401
++++ V G L + + ++ + + Q + + + VVHR+++
Sbjct: 87 LIFDLVTGGELFEDI-------VAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPE 139
Query: 402 NVLLDEEFGAHLMGVGLSKF-VPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVY 458
N+LL + V L+ F + EV E+ G GT GYL+PE + ++ D++
Sbjct: 140 NLLLASKLKG--AAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 459 SFGVLL 464
+ GV+L
Sbjct: 198 ACGVIL 203
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 35/198 (17%)
Query: 293 GSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHG---DRYIVY 344
G VAVK R +RS F R+ E Y + L H N++ + D+G ++V
Sbjct: 65 GEEVAVKIFSSREERSWF-REAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVS 119
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ +G L +L+ ++ +K+A + A G+A LH ++ KP + HRD++
Sbjct: 120 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRN------ 449
+ N+L+ + + +GL+ V + + +A GT Y+APE + +
Sbjct: 175 SKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 232
Query: 450 ELTTKSDVYSFGVLLLEI 467
E ++D+Y+ G++ EI
Sbjct: 233 ESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 293 GSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHG---DRYIVY 344
G VAVK R +RS F R+ E Y + L H N++ + D+G ++V
Sbjct: 52 GEEVAVKIFSSREERSWF-REAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVS 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ +G L +L+ + +K+A + A G+A LH ++ KP + HRD++
Sbjct: 107 DYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 161
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRN------ 449
+ N+L+ + + +GL+ V + + +A GT Y+APE + +
Sbjct: 162 SKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 219
Query: 450 ELTTKSDVYSFGVLLLEI 467
E ++D+Y+ G++ EI
Sbjct: 220 ESFKRADIYAMGLVFWEI 237
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 119
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYL 172
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
APE + N+ D + GV++ E+ +C R
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 202
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 293 GSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHG---DRYIVY 344
G VAVK R +RS F R+ E Y + L H N++ + D+G ++V
Sbjct: 32 GEEVAVKIFSSREERSWF-REAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVS 86
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ +G L +L+ + +K+A + A G+A LH ++ KP + HRD++
Sbjct: 87 DYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 141
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRN------ 449
+ N+L+ + + +GL+ V + + +A GT Y+APE + +
Sbjct: 142 SKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 199
Query: 450 ELTTKSDVYSFGVLLLEI 467
E ++D+Y+ G++ EI
Sbjct: 200 ESFKRADIYAMGLVFWEI 217
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 334 CYDHGDRY------IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHD 387
Y G++ +V ++V + R H R ++L L + +A++H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 388 KVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFV 446
+ HRDI+ N+LLD + L G +K + V E V + Y APE +
Sbjct: 179 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELI 232
Query: 447 Y-RNELTTKSDVYSFGVLLLEIRL 469
+ + T+ DV+S G +L E+ L
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLL 256
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 35/198 (17%)
Query: 293 GSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHG---DRYIVY 344
G VAVK R +RS F R+ E Y + L H N++ + D+G ++V
Sbjct: 29 GEEVAVKIFSSREERSWF-REAEIYQTV----MLRHENILGFIAADNKDNGTWTQLWLVS 83
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIR 399
++ +G L +L+ + +K+A + A G+A LH ++ KP + HRD++
Sbjct: 84 DYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 138
Query: 400 ASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRN------ 449
+ N+L+ + + +GL+ V + + +A GT Y+APE + +
Sbjct: 139 SKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 196
Query: 450 ELTTKSDVYSFGVLLLEI 467
E ++D+Y+ G++ EI
Sbjct: 197 ESFKRADIYAMGLVFWEI 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 122
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 123 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYL 175
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + N+ D + GV++ E+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEM 201
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 119
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYL 172
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + N+ D + GV++ E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 275 RLLGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGC 333
+++G+ G Y L D G VA+K++ Q K+ E+ +L H N+V ++
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 334 CYDHGDRYIVYEFVVNGPLD-------RWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
Y G++ E +N LD R H R ++L L + +A++H
Sbjct: 161 FYSSGEKKD--EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 387 DKVKPHVVHRDIRASNVLLDEEFGA-HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEF 445
+ HRDI+ N+LLD + L G +K + V E V + Y APE
Sbjct: 219 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPEL 272
Query: 446 VY-RNELTTKSDVYSFGVLLLEIRL 469
++ + T+ DV+S G +L E+ L
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLL 297
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 124
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 125 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYL 177
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
APE + N+ D + GV++ E+ +C R
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 207
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEF---YSEIG 317
+T N E +LLG GT+ ++ G A+K LK+ K E +E
Sbjct: 6 VTMNEFEYLKLLGK----GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATT 377
HP L A+K H V E+ G L H+ R R
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-RVFSEDRARFYGAE 117
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG-- 435
+ + +LH + +VV+RD++ N++LD++ + GL K E +++ M
Sbjct: 118 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFC 171
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
GT YLAPE + N+ D + GV++ E+ +C R
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 119
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYL 172
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
APE + N+ D + GV++ E+ +C R
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 119
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYL 172
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + N+ D + GV++ E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + SS +R ++E E+ + HPN++ + + D ++ E V G L
Sbjct: 45 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 104
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+L SL + + G+ +LH K + H D++ N++L
Sbjct: 105 FLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIML--------- 148
Query: 415 GVGLSKFVPWEVMQ------ERTVMAG-------GTYGYLAPEFVYRNELTTKSDVYSFG 461
L K VP ++ + AG GT ++APE V L ++D++S G
Sbjct: 149 ---LDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205
Query: 462 VL 463
V+
Sbjct: 206 VI 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEF---YSEIG 317
+T N E +LLG GT+ ++ G A+K LK+ K E +E
Sbjct: 5 VTMNEFEYLKLLGK----GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATT 377
HP L A+K H V E+ G L H+ R R
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-RVFSEDRARFYGAE 116
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG-- 435
+ + +LH + +VV+RD++ N++LD++ + GL K E +++ M
Sbjct: 117 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFC 170
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
GT YLAPE + N+ D + GV++ E+ +C R
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 324 HPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIA 383
HP L A+K H V E+ G L H+ R + R + +
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARF-YGAEIVSALE 119
Query: 384 FLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYL 441
+LH + VV+RDI+ N++LD++ + GL K E + + M GT YL
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYL 172
Query: 442 APEFVYRNELTTKSDVYSFGVLLLEI 467
APE + N+ D + GV++ E+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 266 ITKNFSEGNRLLGDSKTGGTYSGIL-----PDGSRVAVKRLKRSSFQRKKEF---YSEIG 317
+T N E +LLG GT+ ++ G A+K LK+ K E +E
Sbjct: 7 VTMNEFEYLKLLGK----GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATT 377
HP L A+K H V E+ G L H+ R R
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRE-RVFSEDRARFYGAE 118
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAG-- 435
+ + +LH + +VV+RD++ N++LD++ + GL K E +++ M
Sbjct: 119 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFC 172
Query: 436 GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRR 474
GT YLAPE + N+ D + GV++ E+ +C R
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM---MCGR 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + SS +R ++E E+ + HPN++ + + D ++ E V G L
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 97
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLM 414
+L SL + + G+ +LH K + H D++ N++L
Sbjct: 98 FLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIML--------- 141
Query: 415 GVGLSKFVPWEVMQ------ERTVMAG-------GTYGYLAPEFVYRNELTTKSDVYSFG 461
L K VP ++ + AG GT ++APE V L ++D++S G
Sbjct: 142 ---LDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198
Query: 462 VL 463
V+
Sbjct: 199 VI 200
>pdb|1SL6|A Chain A, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|B Chain B, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|C Chain C, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|D Chain D, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|E Chain E, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1SL6|F Chain F, Crystal Structure Of A Fragment Of Dc-signr (containg The
Carbohydrate Recognition Domain And Two Repeats Of The
Neck) Complexed With Lewis-x.
pdb|1XAR|A Chain A, Crystal Structure Of A Fragment Of Dc-Signr (Containing
The Carbohydrate Recognition Domain And Two Repeats Of
The Neck).
pdb|1XAR|B Chain B, Crystal Structure Of A Fragment Of Dc-Signr (Containing
The Carbohydrate Recognition Domain And Two Repeats Of
The Neck)
Length = 184
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + C+ + R+W +S T C+E+ L + + EE++ Q ++
Sbjct: 53 CPKDWTFFQ--GNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 110
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 111 SWMGLSDLNQEG--TWQWVD 128
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 309 KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDW 368
++E E+ ++ HPN++ + + D ++ E V G L +L SL
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSE 114
Query: 369 AMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV-LLDEEFGA---HLMGVGLSKFVPW 424
+ G+ +LH K + H D++ N+ LLD+ L+ GL+ +
Sbjct: 115 EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE- 170
Query: 425 EVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
+ ++ + + GT ++APE V L ++D++S GV+
Sbjct: 171 DGVEFKNIF--GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2B6B|D Chain D, Cryo Em Structure Of Dengue Complexed With Crd Of Dc-Sign
Length = 175
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 26 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 83
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 84 FTWMGLSDLNQEG--TWQWVD 102
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L HP++V + G Y+V+EF+ L + G A+ + +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG-- 439
+ + HD +++HRD++ VLL + + V L F + E ++AGG G
Sbjct: 143 LRYCHDN---NIIHRDVKPHCVLLASKENS--APVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 440 -YLAPEFVYRNELTTKSDVYSFGVLLL 465
++APE V R DV+ GV+L
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|2XR6|A Chain A, Crystal Structure Of The Complex Of The Carbohydrate
Recognition Domain Of Human Dc-Sign With Pseudo
Trimannoside Mimic
Length = 170
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 21 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 78
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 79 FTWMGLSDLNQEG--TWQWVD 97
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 322 LHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
L HP++V + G Y+V+EF+ L + G A+ + +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG-- 439
+ + HD +++HRD++ VLL + + V L F + E ++AGG G
Sbjct: 145 LRYCHDN---NIIHRDVKPHCVLLASKENS--APVKLGGFGVAIQLGESGLVAGGRVGTP 199
Query: 440 -YLAPEFVYRNELTTKSDVYSFGVLLL 465
++APE V R DV+ GV+L
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILF 226
>pdb|1FVU|A Chain A, Crystal Structure Of Botrocetin
pdb|1FVU|C Chain C, Crystal Structure Of Botrocetin
pdb|1IJK|B Chain B, The Von Willebrand Factor Mutant (I546v) A1 Domain-
Botrocetin Complex
pdb|1U0N|B Chain B, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
pdb|1U0O|A Chain A, The Mouse Von Willebrand Factor A1-Botrocetin Complex
Length = 133
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 27/145 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHS-AQKLCGKN 109
CP W + + C+ + +W ++E +C E GGHL ++ Y +E L KN
Sbjct: 2 CPSGW--SSYEGNCYKFFQQKMNWADAERFCSEQAKGGHLVSIKIYSKEKDFVGDLVTKN 59
Query: 110 VNG----CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLC 165
+ W+G R N S +WSD S E++ V TV C
Sbjct: 60 IQSSDLYAWIGLRVENKEKQCSSEWSDGSSVSYENV----------------VERTVKKC 103
Query: 166 TLVSN--GSRSLVTERCNTSHPFIC 188
+ G + C +PF+C
Sbjct: 104 FALEKDLGFVLWINLYCAQKNPFVC 128
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 29/187 (15%)
Query: 293 GSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIV 343
G++VA+K+L R FQ + K Y E+ + H N++ + D D Y+V
Sbjct: 50 GAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
F+ L + + H G + + + + +G+ ++H ++HRD++ N+
Sbjct: 109 MPFM-GTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIH---AAGIIHRDLKPGNL 159
Query: 404 LLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGG--TYGYLAPEFVYR-NELTTKSDVYSF 460
++E+ ++ GL++ Q + M G T Y APE + T D++S
Sbjct: 160 AVNEDCELKILDFGLAR-------QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSV 212
Query: 461 GVLLLEI 467
G ++ E+
Sbjct: 213 GCIMAEM 219
>pdb|2XR5|A Chain A, Crystal Structure Of The Complex Of The Carbohydrate
Recognition Domain Of Human Dc-Sign With Pseudo
Dimannoside Mimic
Length = 166
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 50 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN 109
+ PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 15 RHPCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 72
Query: 110 VNGCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 73 NRFTWMGLSDLNQEG--TWQWVD 93
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 372 MKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF---GAHLMGVGLSKFVPWEVMQ 428
+++ + +G+ +LH + ++VH D++ N+LL + ++ G+S+ + +
Sbjct: 134 IRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GHACE 189
Query: 429 ERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
R +M GT YLAPE + + +TT +D+++ G++
Sbjct: 190 LREIM--GTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 293 GSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGC---CYDHGDRYIVYEFV 347
G +VA+K++ + K E+ H N++A+K +G+ VY V
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY--V 137
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
V ++ LH I + L L +G+ ++H V+HRD++ SN+L++E
Sbjct: 138 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNE 194
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFGVLL 464
+ G+++ + + + M T Y APE + +E T D++S G +
Sbjct: 195 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 254
Query: 465 LEIRLVLCRRWWTLYTLVHSMSLL 488
E ++ R+ + VH + L+
Sbjct: 255 GE--MLARRQLFPGKNYVHQLQLI 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 293 GSRVAVKRLKRSSFQRK-KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
G VA+K + +++ +EI L H ++ + ++V E+ G
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
L +I R + R+ V + +A++H + HRD++ N+L DE
Sbjct: 95 L---FDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKL 147
Query: 412 HLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVY-RNELTTKSDVYSFGVLL 464
L+ GL P G+ Y APE + ++ L +++DV+S G+LL
Sbjct: 148 KLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
>pdb|1K9I|A Chain A, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|B Chain B, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|C Chain C, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|D Chain D, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|E Chain E, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|F Chain F, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|G Chain G, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|H Chain H, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|I Chain I, Complex Of Dc-Sign And Glcnac2man3
pdb|1K9I|J Chain J, Complex Of Dc-Sign And Glcnac2man3
Length = 156
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 7 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 64
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 65 FTWMGLSDLNQEG--TWQWVD 83
>pdb|1SL4|A Chain A, Crystal Structure Of Dc-Sign Carbohydrate Recognition
Domain Complexed With Man4
pdb|2IT6|A Chain A, Crystal Structure Of Dcsign-Crd With Man2
Length = 155
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 6 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 63
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 64 FTWMGLSDLNQEG--TWQWVD 82
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 365 SLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIRASNVLLDEEFGAHLMGVGLS 419
+LD +++ ++A G+A LH ++ KP + HRD+++ N+L+ + + +GL+
Sbjct: 130 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
Query: 420 KFVPWEVMQERTVMA--------GGTYGYLAPEFVYRN------ELTTKSDVYSFGVLLL 465
VM ++ GT Y+APE + + + D+++FG++L
Sbjct: 190 ------VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
Query: 466 EI 467
E+
Sbjct: 244 EV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 365 SLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIRASNVLLDEEFGAHLMGVGLS 419
+LD +++ ++A G+A LH ++ KP + HRD+++ N+L+ + + +GL+
Sbjct: 101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
Query: 420 KFVPWEVMQERTVMA--------GGTYGYLAPEFVYRN------ELTTKSDVYSFGVLLL 465
VM ++ GT Y+APE + + + D+++FG++L
Sbjct: 161 ------VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 466 EI 467
E+
Sbjct: 215 EV 216
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S GV++ E+
Sbjct: 206 VDIWSVGVIMGEM 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 365 SLDWAMRMKVATTLAQGIAFLHDKV-----KPHVVHRDIRASNVLLDEEFGAHLMGVGLS 419
+LD +++ ++A G+A LH ++ KP + HRD+++ N+L+ + + +GL+
Sbjct: 101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
Query: 420 KFVPWEVMQERTVMA--------GGTYGYLAPEFVYRN------ELTTKSDVYSFGVLLL 465
VM ++ GT Y+APE + + + D+++FG++L
Sbjct: 161 ------VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 466 EI 467
E+
Sbjct: 215 EV 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 293 GSRVAVKRLKRSSFQR--KKEFYSEIGR--FARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
G A+K LK++ R K +++ R + HP +V + G Y++ E++
Sbjct: 45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS 104
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L + R G ++ +A ++ + LH K +++RD++ N++L+ +
Sbjct: 105 GGEL---FMQLEREGIFMEDTACFYLAE-ISMALGHLHQK---GIIYRDLKPENIMLNHQ 157
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFGVLLLE 466
L GL K E + + TV GT Y+APE + R+ D +S G L+ +
Sbjct: 158 GHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 467 I 467
+
Sbjct: 214 M 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 293 GSRVAVKRLKRSSFQR--KKEFYSEIGR--FARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
G A+K LK++ R K +++ R + HP +V + G Y++ E++
Sbjct: 45 GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS 104
Query: 349 NGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
G L + R G ++ +A ++ + LH K +++RD++ N++L+ +
Sbjct: 105 GGEL---FMQLEREGIFMEDTACFYLAE-ISMALGHLHQK---GIIYRDLKPENIMLNHQ 157
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVYSFGVLLLE 466
L GL K E + + TV GT Y+APE + R+ D +S G L+ +
Sbjct: 158 GHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213
Query: 467 I 467
+
Sbjct: 214 M 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++G GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILGFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 36/195 (18%)
Query: 282 TGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRY 341
TG Y+ R+ R S ++E E+ + HPN++ + + D
Sbjct: 50 TGKEYAAKFIKKRRLXSSRRGVS----REEIEREVNILREIRHPNIITLHDIFENKTDVV 105
Query: 342 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRAS 401
++ E V G L +L SL + + G+ +LH K + H D++
Sbjct: 106 LILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPE 158
Query: 402 NVLLDEEFGAHLMGVGLSKFVPWEVMQ------ERTVMAG-------GTYGYLAPEFVYR 448
N++L L K VP ++ + AG GT ++APE V
Sbjct: 159 NIML------------LDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 449 NELTTKSDVYSFGVL 463
L ++D++S GV+
Sbjct: 207 EPLGLEADMWSIGVI 221
>pdb|1SL5|A Chain A, Crystal Structure Of Dc-Sign Carbohydrate Recognition
Domain Complexed With Lnfp Iii (Dextra L504).
pdb|2IT5|A Chain A, Crystal Structure Of Dcsign-crd With Man6
Length = 139
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 52 PCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN 111
PCP +W + C+ + R+W +S T CKE+G L + S EE++ Q ++
Sbjct: 6 PCPWEWTFFQ--GNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRSNR 63
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 64 FTWMGLSDLNQEG--TWQWVD 82
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E MAG T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S GV++ E+
Sbjct: 206 VDIWSVGVIMGEM 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 293 GSRVAVKRLKRS--SFQRKKEFYSEIGRFARLHHPNLVAVKGC---CYDHGDRYIVYEFV 347
G +VA+K++ + K E+ H N++A+K +G+ VY V
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY--V 136
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
V ++ LH I + L L +G+ ++H V+HRD++ SN+L++E
Sbjct: 137 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNE 193
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFGVLL 464
+ G+++ + + + M T Y APE + +E T D++S G +
Sbjct: 194 NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF 253
Query: 465 LEIRLVLCRRWWTLYTLVHSMSLL 488
E ++ R+ + VH + L+
Sbjct: 254 GE--MLARRQLFPGKNYVHQLQLI 275
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E MAG T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 38/215 (17%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVK----RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKG 332
+G + G + G+ G VAVK R ++S F R+ E Y+ + L H N++
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSRDEQSWF-RETEIYNTV----LLRHDNILGF-- 67
Query: 333 CCYDHGDR------YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLH 386
D R +++ + +G L +L ++L+ + +++A + A G+A LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQR-----QTLEPHLALRLAVSAACGLAHLH 122
Query: 387 DKV-----KPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPW--EVMQERTVMAGGTYG 439
++ KP + HRD ++ NVL+ + +GL+ + + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 440 YLAPEFVYRNELTTK-------SDVYSFGVLLLEI 467
Y+APE V ++ T +D+++FG++L EI
Sbjct: 183 YMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 103 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 153
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E MAG T Y APE + D++S G
Sbjct: 154 VNEDCELKILDFGLARHTDDE-------MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 462 VLLLEI 467
++ E+
Sbjct: 207 CIMAEL 212
>pdb|1OZ7|A Chain A, Crystal Structure Of Echicetin From The Venom Of Indian
Saw- Scaled Viper (Echis Carinatus) At 2.4 Resolution
Length = 131
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 26/143 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG--GHLAALTSYEEEHSAQKLCGKNV 110
CPP W N C+ ++WDE+E +C + G GHL ++ S +EE + +N+
Sbjct: 2 CPPGWSSN--GVYCYMLFKEPKTWDEAEKFCNKQGKDGHLLSIESKKEEILVDIVVSENI 59
Query: 111 N---GCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTL 167
W G + S +WSD GSF S + C +
Sbjct: 60 GKMYKIWTGLSERSKEQHCSSRWSD------------GSFFRS-----YEIAIRYSECFV 102
Query: 168 VSNGS--RSLVTERCNTSHPFIC 188
+ S R+ V C + PF+C
Sbjct: 103 LEKQSVFRTWVATPCENTFPFMC 125
>pdb|2VRP|A Chain A, Structure Of Rhodocytin
pdb|3BX4|A Chain A, Crystal Structure Of The Snake Venom Toxin Aggretin
pdb|3BX4|C Chain C, Crystal Structure Of The Snake Venom Toxin Aggretin
Length = 136
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 21/130 (16%)
Query: 66 CFGYIGNFRSWDESETYCK--EIGGHLAALTSYEEEHSAQKLCGK-----NVNGCWVGGR 118
C+ ++WDE+E +C+ E G HLA++ S E L + + + W+G R
Sbjct: 16 CYQAFNEQKTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLR 75
Query: 119 SINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSNGSRSLVTE 178
+ N S +WSD S E++ + C +L G R V
Sbjct: 76 AQNKEQQCSSEWSDGSSVSYENL--IDLHTKKCGALE------------KLTGFRKWVNY 121
Query: 179 RCNTSHPFIC 188
C H F+C
Sbjct: 122 YCEQMHAFVC 131
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M E V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKXQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDXELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 282 TGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRY 341
TG Y+ + + K+L Q K E + I R L H N+V + + G Y
Sbjct: 28 TGHEYAAKI-----INTKKLSARDHQ-KLEREARICRL--LKHSNIVRLHDSISEEGFHY 79
Query: 342 IVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRAS 401
+V++ V G L + + R ++ + + Q + + + VVHRD++
Sbjct: 80 LVFDLVTGGELFEDI--VAR-----EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPE 132
Query: 402 NVLLDEEFGAHLMGVGLSKF-VPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKSDVY 458
N+LL + V L+ F + EV ++ G GT GYL+PE + + D++
Sbjct: 133 NLLLASKCKG--AAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 459 SFGVLL 464
+ GV+L
Sbjct: 191 ACGVIL 196
>pdb|2PY2|A Chain A, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|B Chain B, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|C Chain C, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|D Chain D, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|E Chain E, Structure Of Herring Type Ii Antifreeze Protein
pdb|2PY2|F Chain F, Structure Of Herring Type Ii Antifreeze Protein
Length = 136
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + +CF + W +++ C + G +LA++ S EE ++L ++
Sbjct: 4 CPTDWKMF--NGRCFLFNPLQLHWADAQESCMKEGANLASIHSLEESTFVKELTSADLIP 61
Query: 113 CWVGGRSINTTVGLSWKWSDNMS 135
W+GG V W W D+ S
Sbjct: 62 SWIGGTDCQ--VSTRWFWMDSTS 82
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 42 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYLVMEL-----MDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 293 GSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIV 343
G VAVK+L R FQ + K Y E+ ++H N++++ + + D Y+V
Sbjct: 49 GINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E +++ L + +H LD + + GI LH ++HRD++ SN+
Sbjct: 108 ME-LMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNI 157
Query: 404 LLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
++ + ++ GL++ M V+ T Y APE + D++S G +
Sbjct: 158 VVKSDCTLKILDFGLARTACTNFMMTPYVV---TRYYRAPEVILGMGYAANVDIWSVGCI 214
Query: 464 LLEI 467
+ E+
Sbjct: 215 MGEL 218
>pdb|1BJ3|A Chain A, Crystal Structure Of Coagulation Factor Ix-Binding Protein
(Ix-Bp) From Venom Of Habu Snake With A Heterodimer Of
C-Type Lectin Domains
pdb|1J34|A Chain A, Crystal Structure Of Mg(Ii)-And Ca(Ii)-Bound Gla Domain Of
Factor Ix Complexed With Binding Protein
pdb|1J35|A Chain A, Crystal Structure Of Ca(Ii)-Bound Gla Domain Of Factor Ix
Complexed With Binding Protein
pdb|1X2T|A Chain A, Crystal Structure Of Habu Ix-Bp At Ph 6.5
pdb|1X2T|C Chain C, Crystal Structure Of Habu Ix-Bp At Ph 6.5
pdb|1X2W|A Chain A, Crystal Structure Of Apo-Habu Ix-Bp At Ph 4.6
Length = 129
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 54/144 (37%), Gaps = 26/144 (18%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
CP W E C+ +++WD++E +C E GGHL ++ S E +L +N+
Sbjct: 2 CPSGWSSYE--GHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENI 59
Query: 111 NGC----WVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCT 166
W+G R S +WSD S S + A C
Sbjct: 60 QNTKSYVWIGLRVQGKEKQCSSEWSDGSS----------------VSYENWIEAESKTCL 103
Query: 167 LVSN--GSRSLVTERCNTSHPFIC 188
+ G R V C +PF+C
Sbjct: 104 GLEKETGFRKWVNIYCGQQNPFVC 127
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 103 HLMGAD-----LNNIVKCAKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 153
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 154 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 462 VLLLEI 467
++ E+
Sbjct: 207 CIMAEL 212
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 112 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 162
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 163 VNEDXELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 462 VLLLEI 467
++ E+
Sbjct: 216 CIMAEL 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 14/159 (8%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRM 372
EI RL H N++ + Y+ + Y+V E+ V G + L +P +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE--KRFPVCQAH 112
Query: 373 KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV 432
L G+ +LH + +VH+DI+ N+LL + +G+++ + +
Sbjct: 113 GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 433 MAGGTYGYLAPEFVYRNELTT----KSDVYSFGVLLLEI 467
+ G+ + PE N L T K D++S GV L I
Sbjct: 170 TSQGSPAFQPPEIA--NGLDTFSGFKVDIWSAGVTLYNI 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKXQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPAFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 293 GSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIV 343
G VAVK+L R FQ + K Y E+ ++H N++++ + + D Y+V
Sbjct: 47 GINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 344 YEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
E +++ L + +H LD + + GI LH ++HRD++ SN+
Sbjct: 106 ME-LMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNI 155
Query: 404 LLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
++ + ++ GL++ M V+ T Y APE + D++S G +
Sbjct: 156 VVKSDCTLKILDFGLARTASTNFMMTPYVV---TRYYRAPEVILGMGYKENVDIWSVGCI 212
Query: 464 LLEI 467
+ E+
Sbjct: 213 MGEL 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M E V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDLWSVGCIMGEM 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 112 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 162
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 163 VNEDXELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 462 VLLLEI 467
++ E+
Sbjct: 216 CIMAEL 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 31/133 (23%)
Query: 393 VVHRDIRASNVLLDEEF------------GAHLMGVGLSKFVPWEVMQER---------- 430
+VHRD++ SN L + G H + L KFV E QER
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 431 -----TVMAGGTYGYLAPEFVYR-NELTTKSDVYSFGVLLLEI---RLVLCRRWWTLYTL 481
GT G+ APE + + TT D++S GV+ L + R + L L
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTAL 257
Query: 482 VHSMSLLCAQECL 494
M++ ++E +
Sbjct: 258 AQIMTIRGSRETI 270
>pdb|2BPD|A Chain A, Structure Of Murine Dectin-1
pdb|2BPD|B Chain B, Structure Of Murine Dectin-1
Length = 142
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEE-EHSAQKLCGKNVN 111
C P+WI++ + F + GN SW S+ +C ++G HL + + +E E + +N
Sbjct: 17 CLPNWIMHGKSCYLFSFSGN--SWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN 74
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+ G S N + G W W D
Sbjct: 75 AFWI-GLSRNQSEG-PWFWED 93
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDAGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 116
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 117 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 167
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 168 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 220
Query: 462 VLLLEI 467
++ E+
Sbjct: 221 CIMAEL 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 118 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 168
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 169 VNEDXELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 462 VLLLEI 467
++ E+
Sbjct: 222 CIMAEL 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKSQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL + E M G T Y APE + D++S G
Sbjct: 158 VNEDSELKILDFGLCRHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLSQVIQ--MELDHERMSYLLYQMLVGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 296 VAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRW 355
++ + LK+S + E EI L HP+++ + D +V E+
Sbjct: 42 ISRQLLKKSDMHMRVE--REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-------- 91
Query: 356 LHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKV-------KPHVVHRDIRASNVLLDEE 408
GG D+ + K T +G F + + +VHRD++ N+LLD+
Sbjct: 92 ------GGELFDYIVEKKRMTE-DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN 144
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVY-RNELTTKSDVYSFGVLL 464
+ GLS +M + + G+ Y APE + + + DV+S G++L
Sbjct: 145 LNVKIADFGLSN-----IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 103 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 153
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 154 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 462 VLLLEI 467
++ E+
Sbjct: 207 CIMAEL 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 17/189 (8%)
Query: 290 LPDGSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVA-VKGCCYDHGDRY---IVYE 345
L DG A+KR+ Q ++E E +HPN++ V C + G ++ ++
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
F G L + + G L + + + +G+ +H K HRD++ +N+LL
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILL 167
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGG-------TYGYLAPEFVYRNE---LTTKS 455
+E LM +G V R + T Y APE + ++
Sbjct: 168 GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERT 227
Query: 456 DVYSFGVLL 464
DV+S G +L
Sbjct: 228 DVWSLGCVL 236
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYRNELTTKS-DVYSFG 461
++E+ ++ GL++ E M G T Y APE + ++ D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 109 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 159
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 160 VNEDSELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 462 VLLLEI 467
++ E+
Sbjct: 213 CIMAEL 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 42 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYLVMEL-----MDANLXQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 114 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 164
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 165 VNEDCELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 462 VLLLEI 467
++ E+
Sbjct: 218 CIMAEL 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 113 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 163
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 164 VNEDSELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 462 VLLLEI 467
++ E+
Sbjct: 217 CIMAEL 222
>pdb|1JWI|B Chain B, Crystal Structure Of Bitiscetin, A Von Willeband Factor-
Dependent Platelet Aggregation Inducer.
pdb|1UEX|B Chain B, Crystal Structure Of Von Willebrand Factor A1 Domain
Complexed With Snake Venom Bitiscetin
Length = 125
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 22/138 (15%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
C PDW + K C+ ++W ++E +CKE+ GGHL ++ S EE KL + +
Sbjct: 4 CLPDW--SSYKGHCYKVFKVEKTWADAEKFCKELVNGGHLMSVNSREEGEFISKLALEKM 61
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
R + +GLS W +W + L + +C + +
Sbjct: 62 -------RIVLVWIGLSHFWRICPLRWTDG-----------ARLDYRALSDEPICFVAES 103
Query: 171 GSRSLVTERCNTSHPFIC 188
+ CN F+C
Sbjct: 104 FHNKWIQWTCNRKKSFVC 121
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 113 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 163
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 164 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 462 VLLLEI 467
++ E+
Sbjct: 217 CIMAEL 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 114 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 164
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 165 VNEDCELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 462 VLLLEI 467
++ E+
Sbjct: 218 CIMAEL 223
>pdb|2BPE|A Chain A, Structure Of Murine Dectin-1
pdb|2BPE|B Chain B, Structure Of Murine Dectin-1
pdb|2BPH|A Chain A, Structure Of Murine Dectin-1
pdb|2BPH|B Chain B, Structure Of Murine Dectin-1
Length = 140
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEE-EHSAQKLCGKNVN 111
C P+WI++ + F + GN SW S+ +C ++G HL + + +E E + +N
Sbjct: 8 CLPNWIMHGKSCYLFSFSGN--SWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN 65
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+ G S N + G W W D
Sbjct: 66 AFWI-GLSRNQSEG-PWFWED 84
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVK--RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G A+K RL++ EI L H N+V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ +V+E + + L + L + GG L+ L GIA+ HD+ V+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLD-VCEGG--LESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVY-RNEL 451
HRD++ N+L++ E + GL++ +P V T Y AP+ + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKY 178
Query: 452 TTKSDVYSFGVLLLEI 467
+T D++S G + E+
Sbjct: 179 STTIDIWSVGCIFAEM 194
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 114 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 164
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 165 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 462 VLLLEI 467
++ E+
Sbjct: 218 CIMAEL 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 114 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 164
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 165 VNEDCELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 462 VLLLEI 467
++ E+
Sbjct: 218 CIMAEL 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 104 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 154
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 155 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 207
Query: 462 VLLLEI 467
++ E+
Sbjct: 208 CIMAEL 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 296 VAVKRLKRSSFQRKKEFYS-----EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
VA+K++K K+ + EI L HPN++ + + +V++F
Sbjct: 38 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF---- 93
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLA-QGIAFLHDKVKPH-VVHRDIRASNVLLDEE 408
++ L I + + +K + QG+ +LH H ++HRD++ +N+LLDE
Sbjct: 94 -METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ----HWILHRDLKPNNLLLDEN 148
Query: 409 FGAHLMGVGLSKFV--PWEVMQERTVMAGGTYGYLAPEFVYRNEL-TTKSDVYSFGVLLL 465
L GL+K P + V T Y APE ++ + D+++ G +L
Sbjct: 149 GVLKLADFGLAKSFGSPNRAYXHQVV----TRWYRAPELLFGARMYGVGVDMWAVGCILA 204
Query: 466 EIRL 469
E+ L
Sbjct: 205 ELLL 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVK--RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G A+K RL++ EI L H N+V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ +V+E + + L + L + GG L+ L GIA+ HD+ V+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLD-VCEGG--LESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVY-RNEL 451
HRD++ N+L++ E + GL++ +P V T Y AP+ + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKY 178
Query: 452 TTKSDVYSFGVLLLEI 467
+T D++S G + E+
Sbjct: 179 STTIDIWSVGCIFAEM 194
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 112 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 162
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 163 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 462 VLLLEI 467
++ E+
Sbjct: 216 CIMAEL 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 105
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 106 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 156
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 157 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 209
Query: 462 VLLLEI 467
++ E+
Sbjct: 210 CIMAEL 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 104 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 154
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 155 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 207
Query: 462 VLLLEI 467
++ E+
Sbjct: 208 CIMAEL 213
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 112 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 162
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 163 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 215
Query: 462 VLLLEI 467
++ E+
Sbjct: 216 CIMAEL 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 109 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 159
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 160 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 462 VLLLEI 467
++ E+
Sbjct: 213 CIMAEL 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 109 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 159
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 160 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 462 VLLLEI 467
++ E+
Sbjct: 213 CIMAEL 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 103 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 153
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 154 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206
Query: 462 VLLLEI 467
++ E+
Sbjct: 207 CIMAEL 212
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 113 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 163
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 164 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 462 VLLLEI 467
++ E+
Sbjct: 217 CIMAEL 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 127 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 177
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 178 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 462 VLLLEI 467
++ E+
Sbjct: 231 CIMAEL 236
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDYGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 42 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYLVMEL-----MDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 130 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 180
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 181 VNEDCELKILDFGLARHTDDE-------MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 462 VLLLEI 467
++ E+
Sbjct: 234 CIMAEL 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G+ A K + K+ EI + L HP LV + D + ++YEF+ G L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
+ + ++ + +G+ +H+ + VH D++ N++ +
Sbjct: 242 ---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNE 295
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L + + Q V GT + APE + +D++S GVL
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 109 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 159
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 160 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 212
Query: 462 VLLLEI 467
++ E+
Sbjct: 213 CIMAEL 218
>pdb|2CL8|A Chain A, Dectin-1 In Complex With Beta-Glucan
pdb|2CL8|B Chain B, Dectin-1 In Complex With Beta-Glucan
Length = 139
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEE-EHSAQKLCGKNVN 111
C P+WI++ + F + GN SW S+ +C ++G HL + + +E E + +N
Sbjct: 7 CLPNWIMHGKSCYLFSFSGN--SWYGSKRHCSQLGAHLLKIDNSKEFEFIESQTSSHRIN 64
Query: 112 GCWVGGRSINTTVGLSWKWSD 132
W+ G S N + G W W D
Sbjct: 65 AFWI-GLSRNQSEG-PWFWED 83
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 126 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 176
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 177 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 229
Query: 462 VLLLEI 467
++ E+
Sbjct: 230 CIMAEL 235
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 35 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 92 EEFQDVYLVMEL-----MDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA---GII 141
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 198
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 199 VDIWSVGCIMGEM 211
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 118 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 168
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 169 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 221
Query: 462 VLLLEI 467
++ E+
Sbjct: 222 CIMAEL 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 104
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 105 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 155
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 156 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 208
Query: 462 VLLLEI 467
++ E+
Sbjct: 209 CIMAEL 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 277 LGDSKTGGTYSGILPDGSRVAVK--RLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCC 334
+G+ G Y G A+K RL++ EI L H N+V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ +V+E + + L + L + GG L+ L GIA+ HD+ V+
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLD-VCEGG--LESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVY-RNEL 451
HRD++ N+L++ E + GL++ +P V T Y AP+ + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSKKY 178
Query: 452 TTKSDVYSFGVLLLEI 467
+T D++S G + E+
Sbjct: 179 STTIDIWSVGCIFAEM 194
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 119 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 169
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 170 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 462 VLLLEI 467
++ E+
Sbjct: 223 CIMAEL 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 119 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 169
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 170 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 462 VLLLEI 467
++ E+
Sbjct: 223 CIMAEL 228
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 127 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 177
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 178 VNEDCELKILDFGLARHTDDE-------MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 462 VLLLEI 467
++ E+
Sbjct: 231 CIMAEL 236
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 130 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 180
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 181 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 233
Query: 462 VLLLEI 467
++ E+
Sbjct: 234 CIMAEL 239
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 293 GSRVAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
G VA+K+ S KK EI +L HPNLV + ++V+E+ +
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
LH + R R + + + Q + F H K + +HRD++ N+L+ +
Sbjct: 88 ----VLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSV 140
Query: 411 AHLMGVGLSKFV--PWEVMQERTVMAGGTYGYLAPE-FVYRNELTTKSDVYSFGVLLLEI 467
L G ++ + P + + T Y +PE V + DV++ G + E+
Sbjct: 141 IKLCDFGFARLLTGPSDYYDDEV----ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAEL 196
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 103 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 155
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 156 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 463 L 463
+
Sbjct: 205 I 205
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 113 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 163
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 164 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 462 VLLLEI 467
++ E+
Sbjct: 217 CIMAEL 222
>pdb|3T3A|A Chain A, Crystal Structure Of H107r Mutant Of Extracellular Domain
Of Mouse Receptor Nkr-P1a
pdb|3T3A|B Chain B, Crystal Structure Of H107r Mutant Of Extracellular Domain
Of Mouse Receptor Nkr-P1a
Length = 139
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 23/153 (15%)
Query: 50 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN 109
K CP DW+ + KCF +W+E C G L + EE +
Sbjct: 3 KLECPQDWL--SHRDKCFRVSQVSNTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK 60
Query: 110 VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVG-SFNSSCTSLPCHVHATVDLCTLV 168
N W+G R T ++WKW + + ++ + G + N SC ++
Sbjct: 61 YNSFWIGLRY--TLPDMNWKWINGSTLNSDVLKITGDTENDSCAAIS------------- 105
Query: 169 SNGSRSLVTERCNTSHPFICMVE--HENKCYYL 199
+ E CN+ + +IC E HE Y+
Sbjct: 106 ---GDKVTFESCNSDNRWICQKELYHETLSNYV 135
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 43 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 102
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 103 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 155
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 156 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 463 L 463
+
Sbjct: 205 I 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFAR--LHH----PNLVAVKGCCYDHGDRYIVYEF 346
G A+K LK+++ +K + +E R R L H P LV + +++ ++
Sbjct: 82 GKLYAMKVLKKATIVQKAK-TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDY 140
Query: 347 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
+ G L H+ + R + +++ V + + LH K +++RDI+ N+LLD
Sbjct: 141 INGGEL---FTHLSQRERFTEHEVQIYVGE-IVLALEHLH---KLGIIYRDIKLENILLD 193
Query: 407 EEFGAHLMGVGLSK-FVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDV--YSFGVL 463
L GLSK FV E ER GT Y+AP+ V + V +S GVL
Sbjct: 194 SNGHVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 464 LLEI 467
+ E+
Sbjct: 252 MYEL 255
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 127 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 177
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 178 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 230
Query: 462 VLLLEI 467
++ E+
Sbjct: 231 CIMAEL 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDRGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 126 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 176
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 177 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 229
Query: 462 VLLLEI 467
++ E+
Sbjct: 230 CIMAEL 235
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|3M9Z|A Chain A, Crystal Structure Of Extracellular Domain Of Mouse Nkr-P1a
Length = 139
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 23/153 (15%)
Query: 50 KAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKN 109
K CP DW+ + KCF +W+E C G L + EE +
Sbjct: 3 KLECPQDWL--SHRDKCFHVSQVSNTWEEGLVDCDGKGATLMLIQDQEELRFLLDSIKEK 60
Query: 110 VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVG-SFNSSCTSLPCHVHATVDLCTLV 168
N W+G R T ++WKW + + ++ + G + N SC ++
Sbjct: 61 YNSFWIGLRY--TLPDMNWKWINGSTLNSDVLKITGDTENDSCAAIS------------- 105
Query: 169 SNGSRSLVTERCNTSHPFICMVE--HENKCYYL 199
+ E CN+ + +IC E HE Y+
Sbjct: 106 ---GDKVTFESCNSDNRWICQKELYHETLSNYV 135
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|2KV3|A Chain A, Human Regenerating Gene Type Iv (Reg Iv) Protein, P91s
Mutant
Length = 131
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEE 98
C P W + KS C+GY R+W ++E C+ G HLA++ S +E
Sbjct: 3 CAPGWFYH--KSNCYGYFRKLRNWSDAELECQSYGNGAHLASILSLKE 48
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|2VUV|A Chain A, Crystal Structure Of Codakine At 1.3a Resolution
pdb|2VUZ|A Chain A, Crystal Structure Of Codakine In Complex With Biantennary
Nonasaccharide At 1.7a Resolution
Length = 129
Score = 37.7 bits (86), Expect = 0.018, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVN- 111
CP W + C+ Y SW +++ C+ +GG LA + E +C +N +
Sbjct: 2 CPDGW--TQFLDLCYIYQSAKASWASAQSSCQALGGILAEPDTACENEVLIHMCKENGDA 59
Query: 112 ---GCWVGGRSINTTVGLSWKWSDN 133
G W+GG+ VG +W+WS +
Sbjct: 60 GSFGPWLGGQK----VGGAWQWSSS 80
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 293 GSRVAVKRLKRSSFQRK---KEFYSEIGRFARLH-HPNLVAVKGCCYDHGDR--YIVYEF 346
G VAVK++ +FQ + + EI L H N+V + DR Y+V+++
Sbjct: 34 GEVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92
Query: 347 VVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLD 406
++ LH + R L+ + V L + I +LH ++HRD++ SN+LL+
Sbjct: 93 -----METDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLN 143
Query: 407 EEFGAHLMGVGLSKF----------VPWEVMQ-------ERTVMAG--GTYGYLAPEFVY 447
E + GLS+ +P + + ++ ++ T Y APE +
Sbjct: 144 AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203
Query: 448 RNELTTKS-DVYSFGVLLLEI 467
+ TK D++S G +L EI
Sbjct: 204 GSTKYTKGIDMWSLGCILGEI 224
>pdb|1UKM|A Chain A, Crystal Structure Of Ems16, An Antagonist Of Collagen
Receptor Integrin Alpha2beta1 (GpiaIIA)
pdb|1V7P|A Chain A, Structure Of Ems16-Alpha2-I Domain Complex
Length = 134
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG--GHLAALTSYEEEHSAQKLCGKNV 110
CP DW ++ C+ IG ++W E+E +C E GHL ++ S EE + +L +
Sbjct: 4 CPSDWTAYDQH--CYLAIGEPQNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQLVSGFM 61
Query: 111 NG----CWVGGRSINTTVGLSWKWSD 132
+ W+G R + +W+D
Sbjct: 62 HRSEIYVWIGLRDRREEQQCNPEWND 87
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDGGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 299 KRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
KR R+S + ++E E+ ++ H N++ + + D ++ E V G L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV-LLDEEFGA---H 412
SL + G+ +LH K + H D++ N+ LLD+
Sbjct: 107 AQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L+ GL+ + + ++ + + GT ++APE V L ++D++S GV+
Sbjct: 160 LIDFGLAHEIE-DGVEFKNIF--GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 25/194 (12%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLH-HPNLV------AVKGCCYDHGD-RYIVY 344
G A+KRL + ++ + E+ +L HPN+V ++ D G +++
Sbjct: 53 GREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112
Query: 345 EFVVNGPLDRWLHHIP-RGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV 403
+ G L +L + RG S D +++ T A + +H + KP ++HRD++ N+
Sbjct: 113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA--VQHMH-RQKPPIIHRDLKVENL 169
Query: 404 LLDEEFGAHLMGVGLSKFV------PWEVMQ----ERTVMAGGTYGYLAPEFV--YRN-E 450
LL + L G + + W + E + T Y PE + Y N
Sbjct: 170 LLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP 229
Query: 451 LTTKSDVYSFGVLL 464
+ K D+++ G +L
Sbjct: 230 IGEKQDIWALGCIL 243
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 42 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 21/194 (10%)
Query: 284 GTYSGILPDGSR-----VAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYD 336
GTY + +R VA+KR++ EI L H N+V + +
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS 72
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+V+EF + L ++ LD + L +G+ F H + +V+HR
Sbjct: 73 DKKLTLVFEFC-DQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHR 125
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVYRNEL-TT 453
D++ N+L++ L GL++ +P V T Y P+ ++ +L +T
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYST 181
Query: 454 KSDVYSFGVLLLEI 467
D++S G + E+
Sbjct: 182 SIDMWSAGCIFAEL 195
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Query: 293 GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPL 352
G+ A K + K+ EI + L HP LV + D + ++YEF+ G L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 353 DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAH 412
+ + ++ + +G+ +H+ + VH D++ N++ +
Sbjct: 136 ---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNE 189
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L + + Q V GT + APE + +D++S GVL
Sbjct: 190 LKLIDFGLTAHLDPKQSVKVTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|2E3X|C Chain C, Crystal Structure Of Russell's Viper Venom
Metalloproteinase
Length = 122
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKNV 110
CP W+ E+ C+ + ++W ++E +C E G HL +L S EEE L +N+
Sbjct: 3 CPSGWLSYEQH--CYKGFNDLKNWTDAEKFCTEQKKGSHLVSLHSREEEKFVVNLISENL 60
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNE 139
T +GL W D +W++
Sbjct: 61 -------EYPATWIGLGNMWKDCRMEWSD 82
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLSQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 299 KRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
KR R+S + ++E E+ ++ H N++ + + D ++ E V G L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV-LLDEEFGA---H 412
SL + G+ +LH K + H D++ N+ LLD+
Sbjct: 107 AQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L+ GL+ + V + GT ++APE V L ++D++S GV+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 299 KRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
KR R+S + ++E E+ ++ H N++ + + D ++ E V G L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV-LLDEEFGA---H 412
SL + G+ +LH K + H D++ N+ LLD+
Sbjct: 107 AQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L+ GL+ + + ++ + + GT ++APE V L ++D++S GV+
Sbjct: 160 LIDFGLAHEIE-DGVEFKNIF--GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 299 KRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
KR R+S + ++E E+ ++ H N++ + + D ++ E V G L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV-LLDEEFGA---H 412
SL + G+ +LH K + H D++ N+ LLD+
Sbjct: 107 AQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L+ GL+ + V + GT ++APE V L ++D++S GV+
Sbjct: 160 LIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 21/194 (10%)
Query: 284 GTYSGILPDGSR-----VAVKRLKRSSFQR--KKEFYSEIGRFARLHHPNLVAVKGCCYD 336
GTY + +R VA+KR++ EI L H N+V + +
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS 72
Query: 337 HGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHR 396
+V+EF + L ++ LD + L +G+ F H + +V+HR
Sbjct: 73 DKKLTLVFEFC-DQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHR 125
Query: 397 DIRASNVLLDEEFGAHLMGVGLSKF--VPWEVMQERTVMAGGTYGYLAPEFVYRNEL-TT 453
D++ N+L++ L GL++ +P V T Y P+ ++ +L +T
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYST 181
Query: 454 KSDVYSFGVLLLEI 467
D++S G + E+
Sbjct: 182 SIDMWSAGCIFAEL 195
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDR--YIVYEFVVNGPLDRW----LHHIPRGGRSLDW 368
EI L HPN+++++ H DR ++++++ + D W H + +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH---DLWHIIKFHRASKANKKPVQ 124
Query: 369 AMRMKVATTLAQ---GIAFLHDKVKPHVVHRDIRASNVLL----DEEFGAHLMGVGLSKF 421
R V + L Q GI +LH V+HRD++ +N+L+ E + +G ++
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 422 V--PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
P + + + + T+ Y APE + TK+ D+++ G + E+
Sbjct: 182 FNSPLKPLADLDPVV-VTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 298 VKRLKRSSFQR---KKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDR 354
+K+ + S +R +++ E+ + HPN++ + + D ++ E V G L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFD 103
Query: 355 WLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE------- 407
+L SL + + G+ +LH + H D++ N++L +
Sbjct: 104 FLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156
Query: 408 ----EFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGV 462
+FG AH + G ++F + + GT ++APE V L ++D++S GV
Sbjct: 157 IKIIDFGLAHKIDFG-NEF--------KNIF--GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 463 L 463
+
Sbjct: 206 I 206
>pdb|1MPU|A Chain A, Crystal Structure Of The Free Human Nkg2d Immunoreceptor
Length = 138
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 38 NGQLAASMNKDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
N ++ + + + PCP +WI K+ C+ + ++W ES+ C L + S E
Sbjct: 6 NQEVQIPLTESYCGPCPKNWIC--YKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKE 63
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCH 157
++ + + + W+G I T SW+W D GS S +L
Sbjct: 64 DQDLLKLVKSYH----WMGLVHIPTNG--SWQWED------------GSILS--PNLLTI 103
Query: 158 VHATVDLCTLVSNGSRSLVTERCNTSHPFICM 189
+ C L ++ + + E C+T + +ICM
Sbjct: 104 IEMQKGDCALYASSFKGYI-ENCSTPNTYICM 134
>pdb|1FM5|A Chain A, Crystal Structure Of Human Cd69
Length = 199
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 39 GQLAASMNKDWK-APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
GQ SM D + C DW+ + K C+ RSW ++ C E G LA + S +
Sbjct: 70 GQYTFSMPSDSHVSSCSEDWVGYQRK--CYFISTVKRSWTSAQNACSEHGATLAVIDSEK 127
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGS 146
+ + ++ G+ + WVG + G WKWS N ++N + GS
Sbjct: 128 DMNFLKRYAGREEH--WVG---LKKEPGHPWKWS-NGKEFNNWFNVTGS 170
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 299 KRLKRSSFQ--RKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL 356
KR R+S + ++E E+ ++ H N++ + + D ++ E V G L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 357 HHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNV-LLDEEFGA---H 412
SL + G+ +LH K + H D++ N+ LLD+
Sbjct: 107 AQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 413 LMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L+ GL+ + + ++ + + GT ++APE V L ++D++S GV+
Sbjct: 160 LIDFGLAHEIE-DGVEFKNIF--GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1WT9|A Chain A, Crystal Structure Of Aa-X-Bp-I, A Snake Venom Protein With
The Activity Of Binding To Coagulation Factor X From
Agkistrodon Acutus
Length = 129
Score = 37.0 bits (84), Expect = 0.027, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC-KEI-GGHLAALTSYEEEHSAQKLCGKNV 110
C W + + C+ ++W ++E++C K++ GGHL ++ S E +L + +
Sbjct: 2 CSSGW--SSYEGHCYKVFKQSKTWTDAESFCTKQVNGGHLVSIESSGEADFVGQLIAQKI 59
Query: 111 NGC----WVGGRSINTTVGLSWKWSDNMS 135
W+G R+ N S +WSD S
Sbjct: 60 KSAKIHVWIGLRAQNKEKQCSIEWSDGSS 88
>pdb|1HYR|B Chain B, Crystal Structure Of Human Mica In Complex With Natural
Killer Cell Receptor Nkg2d
pdb|1HYR|A Chain A, Crystal Structure Of Human Mica In Complex With Natural
Killer Cell Receptor Nkg2d
Length = 137
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 38 NGQLAASMNKDWKAPCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
N ++ + + + PCP +WI K+ C+ + ++W ES+ C L + S E
Sbjct: 5 NQEVQIPLTESYCGPCPKNWIC--YKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKE 62
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCH 157
+ Q L + W+G I T SW+W D GS S +L
Sbjct: 63 D----QDLLKLVKSYHWMGLVHIPTNG--SWQWED------------GSILS--PNLLTI 102
Query: 158 VHATVDLCTLVSNGSRSLVTERCNTSHPFICM 189
+ C L ++ + + E C+T + +ICM
Sbjct: 103 IEMQKGDCALYASSFKGYI-ENCSTPNTYICM 133
>pdb|2LS8|A Chain A, Solution Structure Of Human C-Type Lectin Domain Family 4
Member D
Length = 156
Score = 37.0 bits (84), Expect = 0.030, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW +S C+ + + ++W ESE C +G HL +++ E++ + + ++
Sbjct: 3 CPIDW--RAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLS- 59
Query: 113 CWVGGRSINTTVGLSWKWSD 132
++G R N W+W D
Sbjct: 60 YFLGLRDENAKG--QWRWVD 77
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L + S K Y E+ + H N++ + + D Y+V
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 119 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 169
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 170 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 462 VLLLEI 467
++ E+
Sbjct: 223 CIMAEL 228
>pdb|1IOD|A Chain A, Crystal Structure Of The Complex Between The Coagulation
Factor X Binding Protein From Snake Venom And The Gla
Domain Of Factor X
Length = 129
Score = 37.0 bits (84), Expect = 0.031, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC-KEI-GGHLAALTSYEEEHSAQKLCGKNV 110
C W + + C+ ++W ++E++C K++ GGHL ++ S E +L + +
Sbjct: 2 CSSGW--SSYEGHCYKVFKQSKTWADAESFCTKQVNGGHLVSIESSGEADFVGQLIAQKI 59
Query: 111 NGC----WVGGRSINTTVGLSWKWSDNMS 135
W+G R+ N S +WSD S
Sbjct: 60 KSAKIHVWIGLRAQNKEKQCSIEWSDGSS 88
>pdb|1XPH|A Chain A, Structure Of Dc-Signr And A Portion Of Repeat Domain 8
Length = 150
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + C+ + R+W +S T C+E+ L + + EE++ Q ++
Sbjct: 19 CPKDWTF--FQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 76
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 77 SWMGLSDLNQEG--TWQWVD 94
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 43 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 99
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 100 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 149
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 206
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 207 VDIWSVGCIMGEM 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 80 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 137 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 186
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 243
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 244 VDIWSVGCIMGEM 256
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|2E3X|B Chain B, Crystal Structure Of Russell's Viper Venom
Metalloproteinase
Length = 134
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKL----C 106
CPPD + + C+ ++W+ +E +C E GHL ++ S EE KL
Sbjct: 3 CPPDSSLY--RYFCYRVFKEHKTWEAAERFCMEHPNNGHLVSIESMEEAEFVAKLLSNTT 60
Query: 107 GKNVNGCWVGGRSINTTVGLSWKWSDNMS 135
GK + W+G + S +WSD S
Sbjct: 61 GKFITHFWIGLMIKDKEQECSSEWSDGSS 89
>pdb|1EGG|A Chain A, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
pdb|1EGG|B Chain B, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
pdb|1EGI|A Chain A, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
pdb|1EGI|B Chain B, Structure Of A C-Type Carbohydrate-Recognition Domain
(Crd- 4) From The Macrophage Mannose Receptor
Length = 147
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 53 CPPDWIINEEKSKCFGYIGNFR----SWDESETYCKEIGGHLAALTSYEEEHSAQKL 105
CP DW + S CF + +W ES +C+ +GG LA++ + EE+ + +L
Sbjct: 5 CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRL 61
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVY 344
G ++AVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT 135
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 136 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIHSA---DIIHRDLKPSNLA 186
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ GL++ E M G T Y APE + D++S G
Sbjct: 187 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVG 239
Query: 462 VLLLEI 467
++ E+
Sbjct: 240 CIMAEL 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 60/242 (24%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIG 317
+ T +LR +F E +R+ D +TG + AVK+++ F+ + E+
Sbjct: 94 WATHQLRLGRGSFGEVHRME-DKQTG----------FQCAVKKVRLEVFRAE-----ELM 137
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG------------PLDRWLHHIPRGGRS 365
A L P +V + G + I E + G P DR L+++ G++
Sbjct: 138 ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYL---GQA 194
Query: 366 LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
L+ G+ +LH + ++H D++A NVLL + G+H L F
Sbjct: 195 LE-------------GLEYLHSR---RILHGDVKADNVLLSSD-GSH---AALCDFGHAV 234
Query: 426 VMQE----RTVMAG----GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWT 477
+Q ++++ G GT ++APE V K DV+S ++L + L C W
Sbjct: 235 CLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM-LNGCHPWTQ 293
Query: 478 LY 479
+
Sbjct: 294 FF 295
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 277 LGDSKTGGTYSGILPD-GSRVAVKRLKRSSFQRKKEFYSEIGRFARLHHPNLVAV----- 330
LG G +S + D RVA+K++ + Q K EI RL H N+V V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 331 ---------KGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQG 381
G + YIV E+ ++ L ++ G L+ R+ L +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEY-----METDLANVLEQGPLLEEHARL-FMYQLLRG 132
Query: 382 IAFLHDKVKPHVVHRDIRASNVLLDEE 408
+ ++H +V+HRD++ +N+ ++ E
Sbjct: 133 LKYIHSA---NVLHRDLKPANLFINTE 156
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 42 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|1Y17|A Chain A, Crystal Structure Of Aa-X-Bp-Ii, A Snake Venom Protein
With The Activity Of Binding To Coagulation Factor X
From Agkistrodon Acutus
Length = 129
Score = 36.2 bits (82), Expect = 0.043, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC-KEI-GGHLAALTSYEEEHSAQKLCGKNV 110
C W + + C+ ++W ++E++C K++ GGHL ++ S E L + +
Sbjct: 2 CSSSW--SSYEGHCYKAFKQSKTWADAESFCTKQVNGGHLVSIESSGEADFVAHLIAQKI 59
Query: 111 NGC----WVGGRSINTTVGLSWKWSDNMS 135
W+G R+ N S +WSD S
Sbjct: 60 KSAKIHVWIGLRAQNKEKQCSIEWSDGSS 88
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 16/187 (8%)
Query: 291 PDGSRVAVKR--LKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
P G V V+R L+ S + E+ +HPN+V + + ++V F+
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 349 NGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
G D H G L A ++ + + + ++H VHR ++AS++L+
Sbjct: 94 YGSAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIHHM---GYVHRSVKASHILISV 147
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG-----YLAPEFVYRN--ELTTKSDVYSF 460
+ +L G+ + + ++R V Y +L+PE + +N KSD+YS
Sbjct: 148 DGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 207
Query: 461 GVLLLEI 467
G+ E+
Sbjct: 208 GITACEL 214
>pdb|3GPR|D Chain D, Crystal Structure Of Rhodocetin
Length = 124
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYC--KEIGGHLAALTSYEEEHSAQKLCGKNV 110
CP W + C+ ++W+++E++C + G LA++ S EEE KL + +
Sbjct: 1 CPLHW--SSYNGYCYRVFSELKTWEDAESFCYAQHKGSRLASIHSREEEAFVGKLASQTL 58
Query: 111 N--GCWVGGRSINTTVGLSWKWSDN 133
W+G N W+WSD+
Sbjct: 59 KYTSMWLGLN--NAWAACKWEWSDD 81
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 47 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 103
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 104 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 153
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 210
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 211 VDLWSVGCIMGEM 223
>pdb|1JZN|A Chain A, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|B Chain B, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|C Chain C, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|D Chain D, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1JZN|E Chain E, Crystal Structure Of A Galactose-Specific C-Type Lectin
pdb|1MUQ|A Chain A, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|B Chain B, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|C Chain C, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|D Chain D, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
pdb|1MUQ|E Chain E, X-Ray Crystal Structure Of Rattlesnake Venom Complexed
With Thiodigalactoside
Length = 135
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 19/145 (13%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCG--- 107
CP DW+ C+ ++W+++E +C++ G HLA+ Y E +
Sbjct: 3 CPLDWL--PMNGLCYKIFNQLKTWEDAEMFCRKYKPGCHLASFHRYGESLEIAEYISDYH 60
Query: 108 KNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTL 167
K W+G R + SW+W+D + + + + P H L
Sbjct: 61 KGQENVWIGLR--DKKKDFSWEWTD---------RSCTDYLTWDKNQPDHYQNKEFCVEL 109
Query: 168 VS-NGSRSLVTERCNTSHPFICMVE 191
VS G R + C + F+C +
Sbjct: 110 VSLTGYRLWNDQVCESKDAFLCQCK 134
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 36 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 92
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 93 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 142
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 199
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 200 VDLWSVGCIMGEM 212
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 291 PDGSRVAVKR--LKRSSFQRKKEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVV 348
P G V V+R L+ S + E+ +HPN+V + + ++V F+
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 349 NGPL-DRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHV--VHRDIRASNVLL 405
G D H +D + +A L QG+ D + H+ VHR ++AS++L+
Sbjct: 110 YGSAKDLICTHF------MDGMNELAIAYIL-QGVLKALDYIH-HMGYVHRSVKASHILI 161
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYG-----YLAPEFVYRN--ELTTKSDVY 458
+ +L G+ + + ++R V Y +L+PE + +N KSD+Y
Sbjct: 162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221
Query: 459 SFGVLLLEI 467
S G+ E+
Sbjct: 222 SVGITACEL 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 80 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 137 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 186
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 243
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 244 VDIWSVGCIMGEM 256
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y IL VA+K+L R FQ + K Y E+ ++H N++ + +
Sbjct: 44 AAYDAIL--ERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 100
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D YIV E +D L + + LD + + GI LH ++
Sbjct: 101 EEFQDVYIVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 150
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV---TRYYRAPEVILGMGYKEN 207
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 208 VDIWSVGCIMGEM 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 18/181 (9%)
Query: 293 GSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G +VA+K+L R FQ + K Y E+ + H N++ + Y+F +
Sbjct: 49 GEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 350 GPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEF 409
P + G + + ++ V L +G+ ++H VVHRD++ N+ ++E+
Sbjct: 108 MPFMQTDLQKIMGLKFSEEKIQYLVYQML-KGLKYIHSA---GVVHRDLKPGNLAVNEDC 163
Query: 410 GAHLMGVGLSKFVPWEVMQERTVMAGG--TYGYLAPEFVYR-NELTTKSDVYSFGVLLLE 466
++ GL++ E M G T Y APE + D++S G ++ E
Sbjct: 164 ELKILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 216
Query: 467 I 467
+
Sbjct: 217 M 217
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ N+L+ + A+L+ G++ E + + G Y Y APE + T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLY-YXAPERFSESHATYR 215
Query: 455 SDVYSFGVLLLE 466
+D+Y+ +L E
Sbjct: 216 ADIYALTCVLYE 227
>pdb|1K9J|A Chain A, Complex Of Dc-signr And Glcnac2man3
pdb|1K9J|B Chain B, Complex Of Dc-signr And Glcnac2man3
Length = 139
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNVNG 112
CP DW + C+ + R+W +S T C+E+ L + + EE++ Q ++
Sbjct: 8 CPKDWTF--FQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 65
Query: 113 CWVGGRSINTTVGLSWKWSD 132
W+G +N +W+W D
Sbjct: 66 SWMGLSDLNQEG--TWQWVD 83
>pdb|3HUP|A Chain A, High-Resolution Structure Of The Extracellular Domain Of
Human Cd69
pdb|3HUP|B Chain B, High-Resolution Structure Of The Extracellular Domain Of
Human Cd69
Length = 130
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 39 GQLAASMNKDWK-APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYE 97
GQ SM D + C DW+ + K C+ RSW ++ C E G LA + S +
Sbjct: 1 GQYTFSMPSDSHVSSCSEDWVGYQRK--CYFISTVKRSWTSAQNACSEHGATLAVIDSEK 58
Query: 98 EEHSAQKLCGKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGS 146
+ + ++ G+ + WVG + G WKWS N ++N + GS
Sbjct: 59 DMNFLKRYAGREEH--WVG---LKKEPGHPWKWS-NGKEFNNWFNVTGS 101
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 36 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 93 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 142
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 199
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 200 VDIWSVGCIMGEM 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 42 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 35 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 92 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 141
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 198
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 199 VDIWSVGCIMGEM 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 43 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 100 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 149
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 206
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 207 VDIWSVGCIMGEM 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 41 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 97
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 98 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 147
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 204
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 205 VDIWSVGCIMGEM 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 60/242 (24%)
Query: 258 FTTEELRSITKNFSEGNRLLGDSKTGGTYSGILPDGSRVAVKRLKRSSFQRKKEFYSEIG 317
+ T +LR +F E +R+ D +TG + AVK+++ F+ + E+
Sbjct: 75 WATHQLRLGRGSFGEVHRME-DKQTG----------FQCAVKKVRLEVFRAE-----ELM 118
Query: 318 RFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG------------PLDRWLHHIPRGGRS 365
A L P +V + G + I E + G P DR L+++ G++
Sbjct: 119 ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYL---GQA 175
Query: 366 LDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWE 425
L+ G+ +LH + ++H D++A NVLL + G+H L F
Sbjct: 176 LE-------------GLEYLHSR---RILHGDVKADNVLLSSD-GSH---AALCDFGHAV 215
Query: 426 VMQE----RTVMAG----GTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIRLVLCRRWWT 477
+Q + ++ G GT ++APE V K DV+S ++L + L C W
Sbjct: 216 CLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM-LNGCHPWTQ 274
Query: 478 LY 479
+
Sbjct: 275 FF 276
>pdb|3UBU|A Chain A, Crystal Structure Of Agkisacucetin, A Gpib-Binding Snaclec
(Snake C- Type Lectin) That Inhibits Platelet
Length = 131
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 20/140 (14%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKN- 109
C P W ++ C+ ++WD++E +C E GGHL ++ S E +L +N
Sbjct: 4 CLPGWSAYDQS--CYRVFKLLKTWDDAEKFCTERPKGGHLVSIESAGERDFVAQLVSENK 61
Query: 110 -VNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLV 168
+ W+G + + S +W+D S E+ S S C V
Sbjct: 62 QTDNVWLGLKIQSKGQQCSTEWTDGSSVSYENF-------SEYQSKKCFVLEK------- 107
Query: 169 SNGSRSLVTERCNTSHPFIC 188
+ G R+ + C + + F+C
Sbjct: 108 NTGFRTWLNLNCGSEYSFVC 127
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 42 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 99 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 148
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 205
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 206 VDIWSVGCIMGEM 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 43 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 100 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 149
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 206
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 207 VDIWSVGCIMGEM 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 284 GTYSGILPDGSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAV------KGCC 334
Y +L VA+K+L R FQ + K Y E+ ++H N++++ +
Sbjct: 36 AAYDAVL--DRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 335 YDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
+ D Y+V E +D L + + LD + + GI LH ++
Sbjct: 93 EEFQDVYLVMEL-----MDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GII 142
Query: 395 HRDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNELTTK 454
HRD++ SN+++ + ++ GL++ M V+ T Y APE +
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVILGMGYKEN 199
Query: 455 SDVYSFGVLLLEI 467
D++S G ++ E+
Sbjct: 200 VDIWSVGCIMGEM 212
>pdb|3UBU|B Chain B, Crystal Structure Of Agkisacucetin, A Gpib-Binding Snaclec
(Snake C- Type Lectin) That Inhibits Platelet
Length = 126
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 29/142 (20%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEE----HSAQKLC 106
CP W E C+ + ++WD++E +C E GGHL ++ S EE H A +
Sbjct: 4 CPLRWSAYE--GHCYLVVKEKKTWDDAEKFCTEQRKGGHLVSVHSREEADFLVHLAYPIL 61
Query: 107 GKNVNGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCT 166
+++ W +GLS W+D +W++ F S + C + T
Sbjct: 62 --DLSLIW---------MGLSNMWNDCKREWSDGTKL--DFKSWAKTSDCLIGKT----- 103
Query: 167 LVSNGSRSLVTERCNTSHPFIC 188
+G + C+ H F+C
Sbjct: 104 ---DGDNQWLNMDCSKKHYFVC 122
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 293 GSRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAVKGC------CYDHGDRYIVY 344
G RVAVK+L R S K Y E+ + H N++ + + D Y+V
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 345 EFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVL 404
+ L++I + + D ++ + L +G+ ++H ++HRD++ SN+
Sbjct: 107 HLMGAD-----LNNIVKCQKLTDDHVQFLIYQIL-RGLKYIH---SADIIHRDLKPSNLA 157
Query: 405 LDEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFG 461
++E+ ++ L++ E M G T Y APE + D++S G
Sbjct: 158 VNEDCELKILDFYLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 210
Query: 462 VLLLEI 467
++ E+
Sbjct: 211 CIMAEL 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 294 SRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVYE 345
+VAVK+L R S + Y E+ L H N++ + D + Y+V
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
+ L++I + D ++ V L +G+ ++H ++HRD++ SNV +
Sbjct: 114 LMGAD-----LNNIVKSQALSDEHVQFLVYQLL-RGLKYIHSA---GIIHRDLKPSNVAV 164
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFGV 462
+E+ ++ GL++ Q M G T Y APE + D++S G
Sbjct: 165 NEDSELRILDFGLAR-------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 463 LLLEI 467
++ E+
Sbjct: 218 IMAEL 222
>pdb|3GPR|C Chain C, Crystal Structure Of Rhodocetin
Length = 134
Score = 35.4 bits (80), Expect = 0.093, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIG--GHLAALTSYEEEHSAQKLCGKNV 110
C P W ++ C+ ++WDE+E +C E GHL ++ S E +L N+
Sbjct: 3 CLPGWSAYDQH--CYQAFNEPKTWDEAERFCTEQAKRGHLVSIGSDGEADFVAQLVTNNI 60
Query: 111 NG----CWVGGRSINTTVGLSWKWSDNMS----KWN 138
W+G R S +WS + S WN
Sbjct: 61 KRPELYVWIGLRDRRKEQQCSSEWSMSASIIYVNWN 96
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 29/155 (18%)
Query: 259 TTEELRSITKNFSEGNRLLGDSKTGGTYSGI-LPDGSRVAVKRLKRSSFQRKKE-----F 312
+ + R ITK LG+ G Y I VA+KR++ + ++E
Sbjct: 32 SIDRYRRITK--------LGEGTYGEVYKAIDTVTNETVAIKRIR---LEHEEEGVPGTA 80
Query: 313 YSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRM 372
E+ L H N++ +K + + ++++E+ N L +++ P D +MR+
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND-LKKYMDKNP------DVSMRV 133
Query: 373 --KVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
L G+ F H + +HRD++ N+LL
Sbjct: 134 IKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLL 165
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 20/182 (10%)
Query: 293 GSRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVN 349
G +VA+K+L R FQ + K Y E+ + H N++ + Y+F +
Sbjct: 67 GEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 350 GP-LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEE 408
P + L I G + + +G+ ++H VVHRD++ N+ ++E+
Sbjct: 126 MPFMQTDLQKI--MGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNED 180
Query: 409 FGAHLMGVGLSKFVPWEVMQERTVMAGG--TYGYLAPEFVYR-NELTTKSDVYSFGVLLL 465
++ GL++ E M G T Y APE + D++S G ++
Sbjct: 181 CELKILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 233
Query: 466 EI 467
E+
Sbjct: 234 EM 235
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 393 VVHRDIRASNVLLDEEFG-AHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNEL 451
VVHRDI+ N+L+D G A L+ G + E GT Y PE++ R++
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGAL----LHDEPYTDFDGTRVYSPPEWISRHQY 215
Query: 452 -TTKSDVYSFGVLLLEI 467
+ V+S G+LL ++
Sbjct: 216 HALPATVWSLGILLYDM 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 315 EIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDRWL-HHIPRGGRSLDWAMRMK 373
E+ L H N+V + + +V+E+ LD+ L ++ G ++
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKL 104
Query: 374 VATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGL--SKFVPWEVMQERT 431
L +G+A+ H + V+HRD++ N+L++E L GL +K +P +
Sbjct: 105 FLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161
Query: 432 VMAGGTYGYLAPEFVY-RNELTTKSDVYSFGVLLLEI 467
V T Y P+ + + +T+ D++ G + E+
Sbjct: 162 V----TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 194
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 336 DHGDRYIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVH 395
D + Y+V ++ V G L L + + L M + I +H + H VH
Sbjct: 145 DDNNLYLVMDYYVGGDL---LTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVH 198
Query: 396 RDIRASNVLLDEEFGAHLMGVGLSKFVPWEVMQERTV---MAGGTYGYLAPEFVY----- 447
RDI+ N+L+D L G ++M++ TV +A GT Y++PE +
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSC----LKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 448 RNELTTKSDVYSFGVLLLEI 467
+ + D +S GV + E+
Sbjct: 255 KGRYGPECDWWSLGVCMYEM 274
>pdb|1KCG|A Chain A, Nkg2d In Complex With Ulbp3
pdb|1KCG|B Chain B, Nkg2d In Complex With Ulbp3
Length = 124
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 23/139 (16%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
PCP +WI K+ C+ + ++W ES+ C L + S E++ + + +
Sbjct: 5 GPCPKNWIC--YKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQDLLKLVKSYH- 61
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
W+G I T SW+W D GS S +L + C L ++
Sbjct: 62 ---WMGLVHIPTNG--SWQWED------------GSILS--PNLLTIIEMQKGDCALYAS 102
Query: 171 GSRSLVTERCNTSHPFICM 189
+ + E C+T + +ICM
Sbjct: 103 SFKGYI-ENCSTPNTYICM 120
>pdb|1YPO|A Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|C Chain C, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|D Chain D, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|E Chain E, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|F Chain F, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|G Chain G, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
pdb|1YPO|H Chain H, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1
21 Space Group
Length = 132
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
APCP DWI + E C+ + +W++S+ C + L + S + Q+ +
Sbjct: 2 APCPQDWIWHGE--NCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSS 59
Query: 111 NGCWVGGRSINTTVGLSWKWSD 132
W+G N + W W D
Sbjct: 60 FPFWMGLSRRNPS--YPWLWED 79
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 292 DGSRVAVKRLKRSSFQRKKEF---YSEIGRFARL-HHPNLVAVKGCCYDHGDRYIVYEFV 347
DG AVKR S F+ K+ +E+G ++ HP V ++ + G Y+ E
Sbjct: 81 DGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC 139
Query: 348 VNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDE 407
GP H G SL A +A LH + +VH D++ +N+ L
Sbjct: 140 --GP--SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGP 192
Query: 408 EFGAHLMGVGLSKFVPWEVMQERTVMAG----GTYGYLAPEFVYRNELTTKSDVYSFGVL 463
L GL +++ T AG G Y+APE + + T +DV+S G+
Sbjct: 193 RGRCKLGDFGL-------LVELGTAGAGEVQEGDPRYMAPELL-QGSYGTAADVFSLGLT 244
Query: 464 LLEI 467
+LE+
Sbjct: 245 ILEV 248
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 294 SRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVYE 345
+VAVK+L R S + Y E+ L H N++ + D + Y+V
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
+ L++I + D ++ V L +G+ ++H ++HRD++ SNV +
Sbjct: 106 LMGAD-----LNNIVKCQALSDEHVQFLVYQLL-RGLKYIHSA---GIIHRDLKPSNVAV 156
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFGV 462
+E+ ++ GL++ Q M G T Y APE + D++S G
Sbjct: 157 NEDCELRILDFGLAR-------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 463 LLLEI 467
++ E+
Sbjct: 210 IMAEL 214
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 294 SRVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNG 350
+RVA+K++ S F+ + + EI R H N++ ++ + ++V
Sbjct: 69 TRVAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQD 126
Query: 351 PLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFG 410
++ L+ + + + L + +G+ ++H +V+HRD++ SN+L++
Sbjct: 127 LMETDLYKLLKS-QQLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCD 182
Query: 411 AHLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 183 LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 294 SRVAVKRLKR--SSFQRKKEFYSEIGRFARLHHPNLVAV------KGCCYDHGDRYIVYE 345
+VAVK+L R S + Y E+ L H N++ + D + Y+V
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 346 FVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLL 405
+ L++I + D ++ V L +G+ ++H ++HRD++ SNV +
Sbjct: 114 LMGAD-----LNNIVKCQALSDEHVQFLVYQLL-RGLKYIHSA---GIIHRDLKPSNVAV 164
Query: 406 DEEFGAHLMGVGLSKFVPWEVMQERTVMAG--GTYGYLAPEFVYR-NELTTKSDVYSFGV 462
+E+ ++ GL++ Q M G T Y APE + D++S G
Sbjct: 165 NEDSELRILDFGLAR-------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 463 LLLEI 467
++ E+
Sbjct: 218 IMAEL 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV--PWEVMQ------- 428
+ + ++++H + ++HRD++ N+ +DE + GL+K V ++++
Sbjct: 125 ILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 429 ---ERTVMAGGTYGYLAPEFV----YRNELTTKSDVYSFGVLLLEI 467
+ A GT Y+A E + + NE K D+YS G++ E+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNE---KIDMYSLGIIFFEM 224
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV--PWEVMQ------- 428
+ + ++++H + ++HRD++ N+ +DE + GL+K V ++++
Sbjct: 125 ILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 429 ---ERTVMAGGTYGYLAPEFV----YRNELTTKSDVYSFGVLLLEI 467
+ A GT Y+A E + + NE K D+YS G++ E+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNE---KIDMYSLGIIFFEM 224
>pdb|1E87|A Chain A, Human Cd69 - Trigonal Form
pdb|1E8I|A Chain A, Human Cd69-Tetragonal Form
pdb|1E8I|B Chain B, Human Cd69-Tetragonal Form
pdb|3CCK|A Chain A, Human Cd69
pdb|3CCK|B Chain B, Human Cd69
Length = 118
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
+ C DW+ + K C+ RSW ++ C E G LA + S ++ + ++ G+
Sbjct: 2 SSCSEDWVGYQRK--CYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREE 59
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGS 146
+ WVG + G WKWS N ++N + GS
Sbjct: 60 H--WVG---LKKEPGHPWKWS-NGKEFNNWFNVTGS 89
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1HQ8|A Chain A, Crystal Structure Of The Murine Nk Cell-Activating
Receptor Nkg2d At 1.95 A
pdb|1JSK|A Chain A, Crystal Structure Of Murine Nk Cell Ligand Rae-1 Beta In
Complex With Nkg2d
pdb|1JSK|B Chain B, Crystal Structure Of Murine Nk Cell Ligand Rae-1 Beta In
Complex With Nkg2d
Length = 123
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 23/139 (16%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
PCP +WI + ++ C+ + ++W++S+ C L + S EE+ + + +
Sbjct: 4 GPCPNNWICH--RNNCYQFFNEEKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYH- 60
Query: 111 NGCWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSLPCHVHATVDLCTLVSN 170
W+G + SW+W D S + V SC V
Sbjct: 61 ---WMG--LVQIPANGSWQWEDGSSLSYNQLTLVEIPKGSCA---------------VYG 100
Query: 171 GSRSLVTERCNTSHPFICM 189
S TE C + +ICM
Sbjct: 101 SSFKAYTEDCANLNTYICM 119
>pdb|1C3A|A Chain A, Crystal Structure Of Flavocetin-A From The Habu Snake
Venom, A Novel Cyclic Tetramer Of C-Type Lectin-Like
Heterodimers
Length = 135
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKE--IGGHLAALTSYEEEHSAQKLCGKNV 110
C P W + C+ ++W+++E++C+E HL ++ S E +L + +
Sbjct: 4 CIPGW--SAYDRYCYQAFSKPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQLVAEKI 61
Query: 111 NG----CWVGGRSINTTVGLSWKWSDNMSKWNESIHAVGSFNSSCTSL 154
W+G R N +WSD S E++ V F+ C +L
Sbjct: 62 KTSFQYVWIGLRIQNKEQQCRSEWSDASSVNYENL--VKQFSKKCYAL 107
>pdb|1GZ2|A Chain A, Crystal Structure Of The Ovocleidin-17 A Major Protein Of
The Gallus Gallus Eggshell Calcified Layer
Length = 142
Score = 33.9 bits (76), Expect = 0.26, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEI--GGHLAALTSYEEEHSAQKLCGKNV 110
C P W+ C G+ SW +E++C+ G HLAA+ S E +L
Sbjct: 5 CGPGWV--PTPGGCLGFFSRELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNAXR 62
Query: 111 NGCWVG-GRSINTTVGL-------SWKWSDNMSKWNESIH 142
G G G +GL SW+WSD + S H
Sbjct: 63 GGDGSGEGADGRVWIGLHRPAGSRSWRWSDGTAPRFASWH 102
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 17/141 (12%)
Query: 337 HGDR--YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
HG R I+ E + G L + RG ++ ++ + I FLH ++
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSH---NIA 131
Query: 395 HRDIRASNVLL---DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNEL 451
HRD++ N+L +++ L G +K E Q T Y+APE + +
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKY 187
Query: 452 TTKSDVYSFGVLLLEIRLVLC 472
D++S GV++ ++LC
Sbjct: 188 DKSCDMWSLGVIMY---ILLC 205
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 17/141 (12%)
Query: 337 HGDR--YIVYEFVVNGPLDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVV 394
HG R I+ E + G L + RG ++ ++ + I FLH ++
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSH---NIA 150
Query: 395 HRDIRASNVLL---DEEFGAHLMGVGLSKFVPWEVMQERTVMAGGTYGYLAPEFVYRNEL 451
HRD++ N+L +++ L G +K E Q T Y+APE + +
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKY 206
Query: 452 TTKSDVYSFGVLLLEIRLVLC 472
D++S GV++ ++LC
Sbjct: 207 DKSCDMWSLGVIMY---ILLC 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3VLG|A Chain A, Crystal Structure Of The W150a Mutant Lox-1 Ctld Showing
Impaired Oxldl Binding
Length = 145
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEEEHSAQKLCGKNV 110
APCP DWI + E C+ + +W++S+ C + L + S + Q+ +
Sbjct: 14 APCPQDWIAHGE--NCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSS 71
Query: 111 NGCWVGGRSINTTVGLSWKWSD 132
W+G N + W W D
Sbjct: 72 FPFWMGLSRRNPSY--PWLWED 91
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 25/106 (23%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLL--------DEEFGAHLMGVGLSKFVPWEVMQE 429
+A G+A LH ++HRD++ N+L+ D++ GA + + +S F + +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 430 -----RTVM--AGGTYGYLAPEFVYR-NELTTKS------DVYSFG 461
RT + GT G+ APE + N L TK D++S G
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLL--------DEEFGAHLMGVGLSKFVPWEVMQE 429
+A G+A LH ++HRD++ N+L+ D++ GA + + +S F + +
Sbjct: 142 IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 430 RTVM-------AGGTYGYLAPEFV---YRNELTTKSDVYSFG 461
GT G+ APE + + LT D++S G
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLL--------DEEFGAHLMGVGLSKFVPWEVMQE 429
+A G+A LH ++HRD++ N+L+ D++ GA + + +S F + +
Sbjct: 142 IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 430 RTVM-------AGGTYGYLAPEFV---YRNELTTKSDVYSFG 461
GT G+ APE + + LT D++S G
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 54 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 112 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 167
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 168 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 55 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 112
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 113 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 168
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 169 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 378 LAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFV-PWEVMQERTVMAGG 436
+ +G+ ++H +V+HRD++ SN+LL+ + GL++ P
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 437 TYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
T Y APE + ++ TKS D++S G +L E+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2YHF|A Chain A, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|B Chain B, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|C Chain C, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|D Chain D, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|E Chain E, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|F Chain F, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|G Chain G, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|H Chain H, 1.9 Angstrom Crystal Structure Of Clec5a
pdb|2YHF|I Chain I, 1.9 Angstrom Crystal Structure Of Clec5a
Length = 118
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 53 CPPDWIINEEKSKCFGYIGNFRSWDESETYCKEIGGHLAALTSYEE 98
CP DW + ++CF + SW+ES +CK G LA + + E+
Sbjct: 2 CPKDWEFYQ--ARCFFLSTSESSWNESRDFCKGKGSTLAIVNTPEK 45
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 55 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 112
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 113 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 168
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 169 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 56 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 113
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 114 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 169
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 170 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 47 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 104
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 105 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 160
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 161 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 54 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 112 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 167
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 50 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 108 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 163
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3BX4|B Chain B, Crystal Structure Of The Snake Venom Toxin Aggretin
pdb|3BX4|D Chain D, Crystal Structure Of The Snake Venom Toxin Aggretin
Length = 146
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 12/97 (12%)
Query: 51 APCPPDWIINEEKSKCFGYIGNFRSWDESETYCK--EIGGHLAALTSYEEEHSAQKLCGK 108
A CP W E C+ ++W ++E +CK HL + S EE KL
Sbjct: 23 ADCPSGWSSYE--GHCYKPFNEPKNWADAERFCKLQPKHSHLVSFQSAEEADFVVKLTRP 80
Query: 109 NV--NGCWVGGRSINTTVGLSWKWSD----NMSKWNE 139
+ N W+G N G +W+WSD N W E
Sbjct: 81 RLKANLVWMGLS--NIWHGCNWQWSDGARLNYKDWQE 115
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 52 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 110 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 165
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 295 RVAVKRLKRSSFQRK---KEFYSEIGRFARLHHPNLVAVKGCCYDHGDRYIVYEFVVNGP 351
RVA+K++ S F+ + + EI R H N++ + + ++V
Sbjct: 58 RVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 115
Query: 352 LDRWLHHIPRGGRSLDWAMRMKVATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGA 411
++ L+ + + + L + +G+ ++H +V+HRD++ SN+LL+
Sbjct: 116 METDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDL 171
Query: 412 HLMGVGLSKFV-PWEVMQERTVMAGGTYGYLAPEFVYRNELTTKS-DVYSFGVLLLEI 467
+ GL++ P T Y APE + ++ TKS D++S G +L E+
Sbjct: 172 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,481,821
Number of Sequences: 62578
Number of extensions: 677784
Number of successful extensions: 3494
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 719
Number of HSP's that attempted gapping in prelim test: 2032
Number of HSP's gapped (non-prelim): 1157
length of query: 553
length of database: 14,973,337
effective HSP length: 104
effective length of query: 449
effective length of database: 8,465,225
effective search space: 3800886025
effective search space used: 3800886025
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)