Query 008787
Match_columns 553
No_of_seqs 193 out of 2052
Neff 10.1
Searched_HMMs 46136
Date Thu Mar 28 16:34:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008787.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008787hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 1.7E-76 3.7E-81 595.2 54.4 526 22-552 53-586 (691)
2 PLN02614 long-chain acyl-CoA s 100.0 6.8E-76 1.5E-80 633.2 62.3 549 4-552 7-555 (666)
3 PLN02861 long-chain-fatty-acid 100.0 1.3E-74 2.7E-79 623.9 61.9 543 7-551 8-551 (660)
4 PLN02430 long-chain-fatty-acid 100.0 2.4E-74 5.2E-79 620.5 62.4 551 1-551 1-551 (660)
5 PLN02736 long-chain acyl-CoA s 100.0 1.7E-71 3.8E-76 600.6 59.9 527 15-551 14-545 (651)
6 PTZ00342 acyl-CoA synthetase; 100.0 7.1E-71 1.5E-75 592.5 59.2 515 18-551 39-628 (746)
7 COG1022 FAA1 Long-chain acyl-C 100.0 3.6E-71 7.8E-76 566.2 50.7 483 41-551 15-507 (613)
8 PLN02387 long-chain-fatty-acid 100.0 1.1E-69 2.4E-74 587.7 58.5 527 20-552 36-594 (696)
9 KOG1180 Acyl-CoA synthetase [L 100.0 7.8E-69 1.7E-73 515.5 46.2 526 18-553 16-575 (678)
10 PTZ00216 acyl-CoA synthetase; 100.0 3.2E-66 7E-71 562.2 57.1 519 19-550 42-595 (700)
11 KOG1177 Long chain fatty acid 100.0 8.4E-68 1.8E-72 500.2 37.6 453 30-552 38-519 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 9.9E-68 2.1E-72 537.1 40.0 435 51-553 25-467 (537)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 8.1E-66 1.7E-70 541.9 45.0 441 40-552 9-459 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 2E-65 4.4E-70 517.2 42.0 435 42-553 9-455 (528)
15 PTZ00237 acetyl-CoA synthetase 100.0 3.3E-62 7.2E-67 526.2 42.8 462 39-552 56-550 (647)
16 PRK06334 long chain fatty acid 100.0 4E-61 8.6E-66 508.8 44.1 436 41-552 18-474 (539)
17 PLN02860 o-succinylbenzoate-Co 100.0 4E-61 8.7E-66 512.4 43.7 442 41-552 6-472 (563)
18 PLN02654 acetate-CoA ligase 100.0 6.2E-61 1.3E-65 518.0 45.5 456 41-552 87-571 (666)
19 PRK07529 AMP-binding domain pr 100.0 1.7E-60 3.7E-65 512.8 47.1 456 41-552 24-503 (632)
20 PRK08180 feruloyl-CoA synthase 100.0 3.4E-60 7.4E-65 509.5 48.8 439 41-552 38-505 (614)
21 TIGR02316 propion_prpE propion 100.0 2.6E-60 5.7E-65 511.8 45.6 455 40-552 50-530 (628)
22 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.8E-60 8.2E-65 511.3 45.3 453 40-552 55-533 (625)
23 PRK12582 acyl-CoA synthetase; 100.0 8.4E-60 1.8E-64 507.5 47.7 465 15-552 19-517 (624)
24 COG1021 EntE Peptide arylation 100.0 4.5E-62 9.7E-67 451.1 25.0 436 41-552 27-472 (542)
25 PRK07788 acyl-CoA synthetase; 100.0 5.1E-60 1.1E-64 503.2 43.4 436 42-552 49-485 (549)
26 PRK13295 cyclohexanecarboxylat 100.0 1.9E-59 4.2E-64 498.3 46.1 440 41-552 23-477 (547)
27 PRK04319 acetyl-CoA synthetase 100.0 1.5E-59 3.2E-64 501.5 44.4 444 40-552 41-490 (570)
28 PRK00174 acetyl-CoA synthetase 100.0 3.9E-59 8.4E-64 504.2 46.4 450 42-552 67-541 (637)
29 PRK09274 peptide synthase; Pro 100.0 4E-59 8.6E-64 496.9 43.9 437 41-552 5-478 (552)
30 PLN02574 4-coumarate--CoA liga 100.0 2.1E-58 4.5E-63 491.3 45.5 460 23-552 23-488 (560)
31 PRK05857 acyl-CoA synthetase; 100.0 6.8E-59 1.5E-63 492.8 40.8 447 34-552 6-460 (540)
32 PLN02246 4-coumarate--CoA liga 100.0 7E-58 1.5E-62 485.5 47.5 458 20-552 5-470 (537)
33 PRK10524 prpE propionyl-CoA sy 100.0 4E-58 8.7E-63 495.9 44.5 453 41-552 52-531 (629)
34 PRK13382 acyl-CoA synthetase; 100.0 7.7E-58 1.7E-62 484.4 44.6 431 42-552 43-474 (537)
35 PRK08314 long-chain-fatty-acid 100.0 1.4E-57 3.1E-62 484.6 46.0 446 40-552 8-474 (546)
36 PRK03640 O-succinylbenzoic aci 100.0 2.1E-57 4.5E-62 476.2 44.9 416 41-552 1-418 (483)
37 PRK06839 acyl-CoA synthetase; 100.0 1.6E-57 3.4E-62 478.9 44.0 424 42-552 2-429 (496)
38 PRK08008 caiC putative crotono 100.0 2.4E-57 5.3E-62 479.6 45.5 445 41-552 6-456 (517)
39 PRK07656 long-chain-fatty-acid 100.0 3.1E-57 6.6E-62 478.8 46.2 443 39-552 2-450 (513)
40 PRK05677 long-chain-fatty-acid 100.0 3.7E-57 8.1E-62 482.1 47.0 449 40-552 22-491 (562)
41 PRK07769 long-chain-fatty-acid 100.0 9.7E-58 2.1E-62 492.8 42.6 455 25-552 5-524 (631)
42 PRK06155 crotonobetaine/carnit 100.0 3.6E-57 7.9E-62 479.5 46.1 440 36-552 15-458 (542)
43 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 4.1E-57 8.8E-62 479.7 46.5 440 42-552 22-475 (538)
44 PRK07638 acyl-CoA synthetase; 100.0 4.2E-57 9.2E-62 474.0 45.0 417 42-552 1-419 (487)
45 PLN03102 acyl-activating enzym 100.0 4E-57 8.6E-62 482.5 44.7 444 42-553 14-479 (579)
46 PRK05605 long-chain-fatty-acid 100.0 4.3E-57 9.3E-62 483.2 45.0 451 41-552 31-503 (573)
47 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 5.6E-57 1.2E-61 477.4 45.0 436 41-552 22-466 (527)
48 PRK06187 long-chain-fatty-acid 100.0 6.8E-57 1.5E-61 477.1 45.1 444 40-552 4-453 (521)
49 PRK05852 acyl-CoA synthetase; 100.0 3.9E-57 8.4E-62 479.4 43.0 444 39-552 13-466 (534)
50 PRK03584 acetoacetyl-CoA synth 100.0 5.9E-57 1.3E-61 488.4 44.8 447 42-552 86-556 (655)
51 PLN02330 4-coumarate--CoA liga 100.0 9E-57 2E-61 477.7 45.2 456 20-552 10-475 (546)
52 PRK05620 long-chain-fatty-acid 100.0 1.4E-56 2.9E-61 479.2 46.5 457 37-552 5-488 (576)
53 PRK07008 long-chain-fatty-acid 100.0 1.8E-56 3.9E-61 474.4 46.2 445 41-552 9-467 (539)
54 TIGR01217 ac_ac_CoA_syn acetoa 100.0 6.7E-57 1.5E-61 485.9 42.9 447 42-552 87-557 (652)
55 PRK07786 long-chain-fatty-acid 100.0 2E-56 4.3E-61 474.7 44.0 436 41-552 16-457 (542)
56 PRK06087 short chain acyl-CoA 100.0 3.9E-56 8.5E-61 473.3 45.8 437 42-552 23-468 (547)
57 PRK07470 acyl-CoA synthetase; 100.0 2.2E-56 4.7E-61 473.4 43.3 438 40-552 5-452 (528)
58 PRK08316 acyl-CoA synthetase; 100.0 4.2E-56 9.1E-61 471.2 44.7 440 41-552 10-453 (523)
59 PRK12492 long-chain-fatty-acid 100.0 5.5E-56 1.2E-60 473.1 44.3 452 41-552 23-499 (562)
60 PLN03052 acetate--CoA ligase; 100.0 1.2E-55 2.5E-60 478.0 46.6 450 42-552 174-648 (728)
61 PRK06145 acyl-CoA synthetase; 100.0 1.2E-55 2.6E-60 464.5 45.3 427 41-552 1-431 (497)
62 PRK06060 acyl-CoA synthetase; 100.0 3.3E-56 7.2E-61 486.2 42.5 412 42-552 4-423 (705)
63 PRK08043 bifunctional acyl-[ac 100.0 2.6E-56 5.6E-61 487.4 41.6 429 41-552 203-649 (718)
64 PRK08315 AMP-binding domain pr 100.0 1.4E-55 3.1E-60 470.6 45.6 445 38-552 12-485 (559)
65 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.2E-55 2.6E-60 466.7 44.6 438 43-552 1-452 (515)
66 PRK12583 acyl-CoA synthetase; 100.0 1.7E-55 3.7E-60 470.1 45.7 441 41-552 17-486 (558)
67 PRK07514 malonyl-CoA synthase; 100.0 1.7E-55 3.7E-60 464.3 44.8 431 41-552 2-435 (504)
68 PRK12476 putative fatty-acid-- 100.0 4.6E-56 1E-60 477.7 41.1 435 41-552 33-536 (612)
69 PRK05851 long-chain-fatty-acid 100.0 2E-56 4.4E-61 472.2 36.8 419 42-552 2-453 (525)
70 PRK06188 acyl-CoA synthetase; 100.0 3E-55 6.5E-60 464.3 43.8 434 41-552 11-451 (524)
71 PRK07059 Long-chain-fatty-acid 100.0 7E-55 1.5E-59 464.6 46.7 454 39-552 20-493 (557)
72 PRK08633 2-acyl-glycerophospho 100.0 1.5E-55 3.2E-60 508.6 44.7 444 39-552 612-1079(1146)
73 TIGR03443 alpha_am_amid L-amin 100.0 7.2E-56 1.6E-60 517.9 42.2 445 42-551 236-735 (1389)
74 TIGR03205 pimA dicarboxylate-- 100.0 1E-54 2.2E-59 461.7 46.5 454 39-552 18-479 (541)
75 PRK06164 acyl-CoA synthetase; 100.0 5.1E-55 1.1E-59 464.3 44.1 442 40-551 8-463 (540)
76 PRK10946 entE enterobactin syn 100.0 4.9E-55 1.1E-59 463.1 43.4 435 41-552 24-467 (536)
77 PRK07867 acyl-CoA synthetase; 100.0 1E-54 2.3E-59 459.1 45.0 421 40-552 3-439 (529)
78 PRK06018 putative acyl-CoA syn 100.0 9.8E-55 2.1E-59 461.7 44.4 447 39-552 7-468 (542)
79 PLN02479 acetate-CoA ligase 100.0 8.7E-55 1.9E-59 464.1 43.1 451 42-552 20-488 (567)
80 PRK13388 acyl-CoA synthetase; 100.0 1E-54 2.2E-59 460.7 43.2 421 42-552 3-438 (540)
81 TIGR02262 benz_CoA_lig benzoat 100.0 2.1E-54 4.6E-59 456.0 45.4 435 41-552 3-442 (508)
82 PRK08751 putative long-chain f 100.0 2.4E-54 5.1E-59 461.0 45.0 451 41-552 24-495 (560)
83 PRK06710 long-chain-fatty-acid 100.0 3.2E-54 7E-59 460.1 45.0 449 40-552 22-489 (563)
84 PRK09088 acyl-CoA synthetase; 100.0 1.6E-54 3.4E-59 454.8 41.8 410 49-552 2-419 (488)
85 PRK13383 acyl-CoA synthetase; 100.0 2.2E-54 4.8E-59 456.4 43.1 420 41-552 34-454 (516)
86 PF00501 AMP-binding: AMP-bind 100.0 4.2E-55 9.2E-60 450.0 35.6 403 48-521 1-416 (417)
87 PRK08279 long-chain-acyl-CoA s 100.0 1.9E-54 4.1E-59 465.0 41.6 435 39-552 34-497 (600)
88 PRK06178 acyl-CoA synthetase; 100.0 5.9E-54 1.3E-58 458.5 45.0 450 40-552 31-500 (567)
89 PRK08974 long-chain-fatty-acid 100.0 1.2E-53 2.6E-58 455.4 45.3 450 41-552 22-490 (560)
90 PRK08162 acyl-CoA synthetase; 100.0 3.3E-53 7.2E-58 450.8 45.9 443 42-552 18-474 (545)
91 PRK13390 acyl-CoA synthetase; 100.0 1.5E-53 3.4E-58 448.6 42.8 427 50-552 5-437 (501)
92 PRK12467 peptide synthase; Pro 100.0 2.2E-54 4.7E-59 537.2 42.5 419 41-551 3094-3528(3956)
93 PRK10252 entF enterobactin syn 100.0 6.9E-54 1.5E-58 499.6 43.7 420 41-550 457-893 (1296)
94 PRK07787 acyl-CoA synthetase; 100.0 2.5E-53 5.4E-58 443.2 41.2 395 53-552 11-409 (471)
95 TIGR01734 D-ala-DACP-lig D-ala 100.0 2.3E-53 5E-58 447.8 41.1 416 43-550 1-429 (502)
96 PRK04813 D-alanine--poly(phosp 100.0 1.2E-52 2.5E-57 442.7 43.6 417 41-551 1-432 (503)
97 PRK13391 acyl-CoA synthetase; 100.0 2.5E-52 5.3E-57 440.5 44.3 429 49-552 4-440 (511)
98 PRK09192 acyl-CoA synthetase; 100.0 4.2E-53 9.2E-58 452.3 38.7 438 32-552 11-498 (579)
99 PRK09029 O-succinylbenzoic aci 100.0 5.2E-53 1.1E-57 439.4 38.1 387 42-552 2-389 (458)
100 PRK12316 peptide synthase; Pro 100.0 3.1E-53 6.8E-58 534.9 43.3 422 41-552 2002-2439(5163)
101 PRK06814 acylglycerophosphoeth 100.0 1.1E-52 2.5E-57 482.8 44.4 433 41-552 630-1068(1140)
102 PRK12467 peptide synthase; Pro 100.0 8.1E-53 1.7E-57 523.2 45.4 422 41-551 1573-2011(3956)
103 PRK07445 O-succinylbenzoic aci 100.0 9.5E-53 2.1E-57 434.2 36.8 361 76-552 19-382 (452)
104 KOG1175 Acyl-CoA synthetase [L 100.0 5.1E-53 1.1E-57 427.3 33.7 448 39-553 60-534 (626)
105 PRK12316 peptide synthase; Pro 100.0 1.3E-52 2.8E-57 529.3 45.1 421 41-551 510-943 (5163)
106 PRK05850 acyl-CoA synthetase; 100.0 2.3E-52 4.9E-57 447.3 40.4 435 43-552 2-493 (578)
107 TIGR01733 AA-adenyl-dom amino 100.0 3.5E-52 7.5E-57 427.2 39.4 389 78-547 1-408 (408)
108 PRK07798 acyl-CoA synthetase; 100.0 4.4E-51 9.6E-56 433.9 47.7 441 42-552 3-466 (533)
109 PRK12406 long-chain-fatty-acid 100.0 1.2E-51 2.6E-56 435.1 41.4 418 75-552 10-437 (509)
110 PTZ00297 pantothenate kinase; 100.0 1.8E-50 4E-55 450.7 52.9 465 39-552 424-895 (1452)
111 PRK07768 long-chain-fatty-acid 100.0 1.3E-51 2.7E-56 438.6 40.4 426 41-551 1-471 (545)
112 PRK08276 long-chain-fatty-acid 100.0 4.2E-51 9E-56 430.4 41.1 414 75-552 10-427 (502)
113 PLN03051 acyl-activating enzym 100.0 8.6E-52 1.9E-56 434.0 35.6 387 108-552 1-416 (499)
114 TIGR01923 menE O-succinylbenzo 100.0 5.5E-51 1.2E-55 421.9 39.3 378 78-552 1-378 (436)
115 PRK05691 peptide synthase; Val 100.0 1.6E-51 3.5E-56 516.0 42.4 422 41-549 3719-4157(4334)
116 PRK05691 peptide synthase; Val 100.0 2.3E-51 4.9E-56 514.8 43.5 419 41-551 1130-1562(4334)
117 PRK07868 acyl-CoA synthetase; 100.0 1.1E-50 2.3E-55 453.4 40.6 431 39-552 444-894 (994)
118 KOG1179 Very long-chain acyl-C 100.0 1.1E-48 2.3E-53 378.5 36.1 439 40-552 75-546 (649)
119 PRK08308 acyl-CoA synthetase; 100.0 4.2E-48 9.1E-53 396.9 38.5 341 75-552 7-349 (414)
120 COG1020 EntF Non-ribosomal pep 100.0 1E-35 2.3E-40 322.5 37.6 409 41-540 226-642 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 2.1E-36 4.7E-41 304.1 26.6 254 216-552 31-291 (358)
122 KOG3628 Predicted AMP-binding 100.0 2.3E-31 4.9E-36 273.9 31.5 446 42-551 770-1287(1363)
123 TIGR02372 4_coum_CoA_lig 4-cou 100.0 9E-31 1.9E-35 262.0 22.8 232 220-550 95-331 (386)
124 TIGR02155 PA_CoA_ligase phenyl 100.0 8E-31 1.7E-35 269.0 22.7 266 218-548 73-349 (422)
125 TIGR03335 F390_ftsA coenzyme F 99.9 1.7E-25 3.6E-30 229.8 23.0 252 218-539 84-352 (445)
126 TIGR03089 conserved hypothetic 99.9 1.4E-24 3E-29 201.3 21.6 221 48-314 2-227 (227)
127 COG1541 PaaK Coenzyme F390 syn 99.9 6.5E-22 1.4E-26 192.8 23.2 272 214-549 84-369 (438)
128 KOG1178 Non-ribosomal peptide 99.9 2E-20 4.3E-25 200.0 20.6 463 24-551 12-511 (1032)
129 KOG3628 Predicted AMP-binding 99.8 7.1E-19 1.5E-23 182.5 20.6 446 41-550 93-637 (1363)
130 TIGR02304 aden_form_hyp probab 99.7 1.8E-14 4E-19 144.8 23.6 243 223-550 102-366 (430)
131 PRK09188 serine/threonine prot 99.2 2E-11 4.3E-16 120.1 6.3 56 490-552 206-265 (365)
132 PF04443 LuxE: Acyl-protein sy 99.1 1.2E-08 2.5E-13 100.7 21.5 237 218-520 87-353 (365)
133 PF03321 GH3: GH3 auxin-respon 98.3 4.8E-06 1E-10 87.1 11.0 145 383-550 267-434 (528)
134 PLN02247 indole-3-acetic acid- 97.9 0.0013 2.9E-08 68.7 20.9 141 379-538 289-463 (606)
135 PLN02249 indole-3-acetic acid- 97.9 0.00024 5.1E-09 74.8 14.3 136 380-538 299-456 (597)
136 PLN02620 indole-3-acetic acid- 97.8 0.004 8.7E-08 65.1 21.7 141 379-538 300-469 (612)
137 COG1541 PaaK Coenzyme F390 syn 93.7 0.36 7.8E-06 48.6 8.9 97 69-166 100-200 (438)
138 TIGR03335 F390_ftsA coenzyme F 86.0 7.9 0.00017 40.1 11.4 91 68-161 95-189 (445)
139 TIGR02155 PA_CoA_ligase phenyl 85.8 7.1 0.00015 40.1 10.9 96 68-164 84-183 (422)
140 PRK06187 long-chain-fatty-acid 80.5 32 0.00069 36.1 13.6 119 57-181 167-291 (521)
141 PRK07656 long-chain-fatty-acid 79.1 28 0.00062 36.4 12.7 104 56-165 165-272 (513)
142 TIGR01923 menE O-succinylbenzo 75.9 26 0.00057 35.8 11.1 117 56-181 110-229 (436)
143 PRK08315 AMP-binding domain pr 73.9 34 0.00074 36.4 11.7 102 56-162 198-303 (559)
144 PRK06334 long chain fatty acid 72.6 62 0.0014 34.4 13.2 122 55-181 181-309 (539)
145 PRK12583 acyl-CoA synthetase; 70.5 47 0.001 35.3 11.8 103 55-162 199-305 (558)
146 TIGR03098 ligase_PEP_1 acyl-Co 70.2 78 0.0017 33.2 13.3 93 68-164 170-265 (515)
147 TIGR01733 AA-adenyl-dom amino 69.8 98 0.0021 31.1 13.5 123 55-182 118-245 (408)
148 PRK03640 O-succinylbenzoic aci 69.1 87 0.0019 32.5 13.2 103 56-164 140-245 (483)
149 PRK04319 acetyl-CoA synthetase 68.5 58 0.0013 34.9 11.9 122 56-182 204-334 (570)
150 PRK07638 acyl-CoA synthetase; 65.8 1.2E+02 0.0026 31.5 13.5 94 68-165 152-248 (487)
151 PF00501 AMP-binding: AMP-bind 65.0 47 0.001 33.7 10.0 90 218-318 8-99 (417)
152 PLN03051 acyl-activating enzym 64.8 63 0.0014 33.9 11.1 104 56-164 118-224 (499)
153 TIGR03089 conserved hypothetic 64.4 38 0.00083 31.3 8.3 54 94-149 171-226 (227)
154 COG4009 Uncharacterized protei 64.3 23 0.0005 26.0 5.1 65 76-151 9-76 (88)
155 KOG1176 Acyl-CoA synthetase [L 64.2 69 0.0015 34.0 10.9 95 237-332 43-139 (537)
156 PRK07788 acyl-CoA synthetase; 62.9 80 0.0017 33.6 11.6 111 68-182 216-334 (549)
157 PRK13295 cyclohexanecarboxylat 62.0 1.3E+02 0.0027 32.0 12.9 104 55-164 195-302 (547)
158 PRK05852 acyl-CoA synthetase; 61.2 1.8E+02 0.0038 30.7 13.9 95 68-165 185-284 (534)
159 PRK07008 long-chain-fatty-acid 61.2 65 0.0014 34.1 10.6 106 55-164 174-283 (539)
160 PLN02860 o-succinylbenzoate-Co 61.1 86 0.0019 33.5 11.5 104 55-164 170-276 (563)
161 PRK08308 acyl-CoA synthetase; 60.6 2E+02 0.0042 29.2 13.7 105 55-165 99-207 (414)
162 PLN03052 acetate--CoA ligase; 60.4 81 0.0018 35.1 11.3 103 57-164 356-461 (728)
163 PRK03584 acetoacetyl-CoA synth 59.8 98 0.0021 33.9 11.8 123 56-182 262-394 (655)
164 PRK08043 bifunctional acyl-[ac 57.6 1.3E+02 0.0028 33.4 12.4 122 55-181 363-489 (718)
165 TIGR02370 pyl_corrinoid methyl 56.0 1.5E+02 0.0033 26.6 11.1 57 268-324 86-147 (197)
166 TIGR03443 alpha_am_amid L-amin 55.7 1.1E+02 0.0023 37.1 12.2 122 56-182 414-540 (1389)
167 PRK06188 acyl-CoA synthetase; 55.0 1.5E+02 0.0032 31.2 12.0 93 68-164 177-271 (524)
168 PLN02565 cysteine synthase 54.9 99 0.0022 30.4 9.7 73 85-157 49-122 (322)
169 TIGR02316 propion_prpE propion 54.6 1.4E+02 0.003 32.5 11.9 122 56-182 231-365 (628)
170 TIGR02262 benz_CoA_lig benzoat 54.6 1.1E+02 0.0024 32.0 10.9 103 56-162 160-266 (508)
171 PRK06164 acyl-CoA synthetase; 54.4 1.1E+02 0.0023 32.4 10.8 104 55-164 179-285 (540)
172 PLN02736 long-chain acyl-CoA s 52.1 1.8E+02 0.004 31.7 12.4 88 238-328 77-166 (651)
173 PRK09274 peptide synthase; Pro 51.5 1E+02 0.0022 32.8 10.1 99 219-320 20-121 (552)
174 PRK08633 2-acyl-glycerophospho 50.9 2.1E+02 0.0046 33.7 13.5 122 55-181 780-908 (1146)
175 PLN02654 acetate-CoA ligase 50.8 1.7E+02 0.0037 32.1 11.9 122 56-182 274-408 (666)
176 PRK13383 acyl-CoA synthetase; 50.5 2.4E+02 0.0052 29.6 12.7 96 68-164 183-280 (516)
177 PRK11761 cysM cysteine synthas 50.0 1.2E+02 0.0026 29.3 9.4 76 78-156 41-117 (296)
178 PRK10252 entF enterobactin syn 49.4 1.8E+02 0.0039 34.9 12.6 123 55-182 596-728 (1296)
179 PRK08314 long-chain-fatty-acid 49.3 1.7E+02 0.0037 30.9 11.4 103 55-163 188-294 (546)
180 TIGR01217 ac_ac_CoA_syn acetoa 48.8 1.6E+02 0.0035 32.2 11.2 101 57-162 264-370 (652)
181 PRK08316 acyl-CoA synthetase; 48.8 1.7E+02 0.0037 30.6 11.2 88 238-328 35-124 (523)
182 TIGR02188 Ac_CoA_lig_AcsA acet 48.5 1.5E+02 0.0032 32.2 10.9 99 218-322 70-170 (625)
183 KOG1177 Long chain fatty acid 48.3 1.6E+02 0.0034 30.4 9.7 101 55-163 232-339 (596)
184 COG0399 WecE Predicted pyridox 48.3 74 0.0016 31.9 7.6 64 86-153 59-127 (374)
185 TIGR00936 ahcY adenosylhomocys 48.0 1.5E+02 0.0032 30.2 9.8 83 76-158 6-91 (406)
186 COG0031 CysK Cysteine synthase 47.1 1.5E+02 0.0033 28.6 9.2 62 94-156 54-116 (300)
187 PLN02556 cysteine synthase/L-3 46.8 1.4E+02 0.0029 30.1 9.3 62 95-156 103-165 (368)
188 PLN03102 acyl-activating enzym 46.7 1.1E+02 0.0025 32.7 9.6 85 239-326 39-125 (579)
189 PTZ00237 acetyl-CoA synthetase 46.0 2E+02 0.0043 31.4 11.4 96 219-320 75-172 (647)
190 cd01445 TST_Repeats Thiosulfat 45.7 56 0.0012 27.4 5.5 42 87-128 81-125 (138)
191 PF01041 DegT_DnrJ_EryC1: DegT 45.0 67 0.0014 32.1 7.0 65 86-154 50-119 (363)
192 TIGR03208 cyc_hxne_CoA_lg cycl 44.8 3.8E+02 0.0082 28.2 13.2 103 55-163 193-299 (538)
193 cd07050 BMC_EutL_repeat2 ethan 44.2 48 0.001 24.6 4.0 41 90-130 3-44 (87)
194 PRK00174 acetyl-CoA synthetase 43.7 2E+02 0.0043 31.3 11.0 99 218-322 80-180 (637)
195 PRK13388 acyl-CoA synthetase; 43.5 1.9E+02 0.0042 30.6 10.6 85 239-326 26-113 (540)
196 PRK10946 entE enterobactin syn 43.2 3.4E+02 0.0074 28.6 12.5 103 56-164 181-288 (536)
197 TIGR02379 ECA_wecE TDP-4-keto- 43.1 88 0.0019 31.5 7.5 58 92-153 62-124 (376)
198 PRK08279 long-chain-acyl-CoA s 42.9 3.1E+02 0.0068 29.4 12.3 103 56-164 198-304 (600)
199 PLN00011 cysteine synthase 42.7 1.9E+02 0.0041 28.4 9.6 67 90-157 56-124 (323)
200 PRK05620 long-chain-fatty-acid 42.7 2.7E+02 0.0059 29.7 11.8 105 55-162 179-286 (576)
201 TIGR01734 D-ala-DACP-lig D-ala 42.5 4.1E+02 0.0089 27.5 13.3 102 56-162 140-246 (502)
202 PRK06839 acyl-CoA synthetase; 42.3 4.1E+02 0.0088 27.5 13.2 105 55-165 147-255 (496)
203 PLN02246 4-coumarate--CoA liga 41.4 2.2E+02 0.0048 30.0 10.7 86 238-326 49-136 (537)
204 PLN03013 cysteine synthase 41.3 1.9E+02 0.0041 29.7 9.4 71 87-157 159-230 (429)
205 PRK07787 acyl-CoA synthetase; 41.0 4.1E+02 0.009 27.3 12.5 103 55-164 126-232 (471)
206 PRK11706 TDP-4-oxo-6-deoxy-D-g 40.9 1.1E+02 0.0024 30.8 7.8 56 94-153 64-124 (375)
207 TIGR01139 cysK cysteine syntha 40.6 2.2E+02 0.0047 27.5 9.6 65 92-157 47-112 (298)
208 TIGR02275 DHB_AMP_lig 2,3-dihy 39.8 3.8E+02 0.0082 28.1 12.2 104 55-164 181-289 (527)
209 PRK07529 AMP-binding domain pr 39.8 1.9E+02 0.004 31.5 10.0 99 218-320 38-137 (632)
210 PRK05857 acyl-CoA synthetase; 39.7 1.9E+02 0.0042 30.6 9.9 82 238-322 40-123 (540)
211 PRK13382 acyl-CoA synthetase; 39.3 3.3E+02 0.007 28.8 11.6 95 68-164 205-300 (537)
212 PRK07798 acyl-CoA synthetase; 39.3 2.7E+02 0.0058 29.2 11.0 88 238-328 27-116 (533)
213 KOG0023 Alcohol dehydrogenase, 39.0 3E+02 0.0065 26.9 9.6 68 92-162 173-240 (360)
214 PRK06155 crotonobetaine/carnit 38.8 1.8E+02 0.0039 30.9 9.5 86 239-327 46-133 (542)
215 PF06543 Lac_bphage_repr: Lact 38.7 24 0.00053 23.0 1.7 26 386-411 22-47 (49)
216 PRK08008 caiC putative crotono 38.6 3.3E+02 0.0072 28.4 11.5 102 218-326 20-123 (517)
217 PRK07445 O-succinylbenzoic aci 37.8 3.6E+02 0.0078 27.8 11.3 120 55-181 118-240 (452)
218 COG0318 CaiC Acyl-CoA syntheta 37.6 3.2E+02 0.007 29.0 11.2 94 218-321 24-119 (534)
219 PLN02614 long-chain acyl-CoA s 37.3 4.3E+02 0.0093 29.0 12.3 87 238-327 78-166 (666)
220 PLN02574 4-coumarate--CoA liga 37.1 2.2E+02 0.0048 30.3 9.9 86 239-326 66-153 (560)
221 PRK05850 acyl-CoA synthetase; 37.1 3.2E+02 0.0068 29.2 11.2 87 238-328 34-125 (578)
222 PRK06814 acylglycerophosphoeth 36.9 6E+02 0.013 30.0 14.3 122 55-181 791-917 (1140)
223 PLN02479 acetate-CoA ligase 36.7 3.8E+02 0.0083 28.5 11.7 85 239-326 45-131 (567)
224 PTZ00342 acyl-CoA synthetase; 36.1 5.2E+02 0.011 28.9 12.7 105 218-327 74-192 (746)
225 cd01449 TST_Repeat_2 Thiosulfa 36.0 89 0.0019 25.0 5.3 41 87-127 64-104 (118)
226 TIGR03590 PseG pseudaminic aci 36.0 2.1E+02 0.0046 27.3 8.6 96 77-182 12-112 (279)
227 PRK13391 acyl-CoA synthetase; 36.0 3.6E+02 0.0077 28.2 11.2 99 218-326 10-110 (511)
228 PF00818 Ice_nucleation: Ice n 34.8 17 0.00037 17.7 0.4 9 414-422 1-9 (16)
229 cd06448 L-Ser-dehyd Serine deh 34.5 2.5E+02 0.0054 27.5 8.9 64 93-157 43-106 (316)
230 TIGR01136 cysKM cysteine synth 34.3 3E+02 0.0066 26.5 9.5 66 91-157 47-113 (299)
231 PRK07470 acyl-CoA synthetase; 34.2 5.7E+02 0.012 26.8 13.1 106 56-164 162-270 (528)
232 PRK09088 acyl-CoA synthetase; 34.1 3.5E+02 0.0076 28.0 10.7 82 238-322 21-104 (488)
233 PRK10717 cysteine synthase A; 34.1 3E+02 0.0065 27.0 9.5 64 93-157 55-119 (330)
234 TIGR01138 cysM cysteine syntha 34.0 3.4E+02 0.0073 26.1 9.7 64 92-156 49-113 (290)
235 PRK07514 malonyl-CoA synthase; 33.9 2.4E+02 0.0052 29.3 9.5 87 238-327 27-115 (504)
236 COG0365 Acs Acyl-coenzyme A sy 33.8 2.6E+02 0.0057 29.6 9.3 98 223-326 27-126 (528)
237 PLN02330 4-coumarate--CoA liga 33.5 2.3E+02 0.0051 29.9 9.4 86 238-326 54-141 (546)
238 PRK06087 short chain acyl-CoA 33.3 5.7E+02 0.012 26.9 12.4 97 56-158 186-286 (547)
239 PRK08276 long-chain-fatty-acid 32.0 3E+02 0.0064 28.7 9.8 86 239-327 11-98 (502)
240 TIGR03595 Obg_CgtA_exten Obg f 31.8 54 0.0012 23.7 2.8 22 86-107 42-63 (69)
241 PRK05605 long-chain-fatty-acid 31.7 2.4E+02 0.0053 30.0 9.2 85 239-326 57-143 (573)
242 PRK11493 sseA 3-mercaptopyruva 31.3 91 0.002 29.9 5.2 53 75-127 200-257 (281)
243 PRK10595 SOS cell division inh 31.3 1.8E+02 0.0039 25.3 6.3 66 90-155 70-141 (164)
244 PRK11658 UDP-4-amino-4-deoxy-L 30.8 2E+02 0.0043 28.9 7.9 63 87-153 59-126 (379)
245 PLN02861 long-chain-fatty-acid 30.7 3.3E+02 0.0071 29.8 10.1 87 238-327 76-164 (660)
246 PLN02387 long-chain-fatty-acid 30.6 3.1E+02 0.0068 30.3 10.0 89 237-328 104-194 (696)
247 PRK10524 prpE propionyl-CoA sy 30.4 4.3E+02 0.0094 28.6 11.0 98 218-321 66-165 (629)
248 PF09269 DUF1967: Domain of un 30.4 41 0.00089 24.3 2.0 29 78-106 34-62 (69)
249 PRK07786 long-chain-fatty-acid 30.4 6.4E+02 0.014 26.5 12.1 95 68-165 183-282 (542)
250 TIGR03588 PseC UDP-4-keto-6-de 29.4 2.5E+02 0.0055 28.1 8.4 64 87-153 55-126 (380)
251 PF05221 AdoHcyase: S-adenosyl 29.3 3.6E+02 0.0077 25.6 8.3 71 91-161 33-105 (268)
252 cd01519 RHOD_HSP67B2 Member of 29.0 1.3E+02 0.0027 23.4 5.0 52 76-127 37-92 (106)
253 PRK07868 acyl-CoA synthetase; 28.8 4.8E+02 0.01 30.3 11.4 102 56-164 605-710 (994)
254 PRK06702 O-acetylhomoserine am 28.4 2.9E+02 0.0062 28.5 8.5 52 105-156 79-133 (432)
255 cd00640 Trp-synth-beta_II Tryp 28.2 4.7E+02 0.01 24.2 9.4 65 92-157 41-105 (244)
256 COG1022 FAA1 Long-chain acyl-C 28.1 4.8E+02 0.01 28.3 10.2 107 53-165 187-296 (613)
257 PRK06060 acyl-CoA synthetase; 28.0 4.7E+02 0.01 28.8 10.9 123 56-182 144-271 (705)
258 PRK06018 putative acyl-CoA syn 27.8 4.4E+02 0.0096 27.8 10.3 95 68-164 186-284 (542)
259 PRK10696 tRNA 2-thiocytidine b 27.3 5.2E+02 0.011 24.3 9.6 72 85-156 12-95 (258)
260 PRK08162 acyl-CoA synthetase; 27.3 3E+02 0.0064 29.1 8.9 86 239-327 43-130 (545)
261 PRK05677 long-chain-fatty-acid 27.3 4.9E+02 0.011 27.6 10.6 87 238-326 48-136 (562)
262 PLN02723 3-mercaptopyruvate su 27.1 1.2E+02 0.0027 29.7 5.4 52 76-127 238-295 (320)
263 PF05452 Clavanin: Clavanin; 27.1 28 0.00061 24.5 0.6 7 493-499 73-79 (80)
264 TIGR01137 cysta_beta cystathio 26.9 4.1E+02 0.0088 27.5 9.6 63 93-156 53-116 (454)
265 PF02350 Epimerase_2: UDP-N-ac 26.6 4.1E+02 0.0088 26.4 9.0 95 79-182 49-153 (346)
266 PRK12406 long-chain-fatty-acid 26.5 5E+02 0.011 27.0 10.4 102 56-163 151-258 (509)
267 cd01561 CBS_like CBS_like: Thi 26.4 4.8E+02 0.01 25.0 9.4 65 93-158 44-109 (291)
268 PRK06381 threonine synthase; V 26.3 2.3E+02 0.005 27.7 7.2 53 105-157 66-118 (319)
269 PF08967 DUF1884: Domain of un 26.2 45 0.00097 24.8 1.5 70 81-166 9-78 (85)
270 cd02070 corrinoid_protein_B12- 25.9 4.9E+02 0.011 23.4 9.5 77 277-403 95-183 (201)
271 PRK07059 Long-chain-fatty-acid 25.9 3.6E+02 0.0079 28.5 9.3 85 238-325 47-133 (557)
272 PRK15407 lipopolysaccharide bi 24.9 3.1E+02 0.0068 28.2 8.1 54 97-154 107-165 (438)
273 PF01436 NHL: NHL repeat; Int 24.4 91 0.002 17.7 2.4 18 503-520 9-26 (28)
274 COG0796 MurI Glutamate racemas 24.3 6.2E+02 0.013 24.1 11.1 104 46-159 19-122 (269)
275 PRK12476 putative fatty-acid-- 24.3 9.1E+02 0.02 26.0 12.9 103 219-327 48-157 (612)
276 PRK13390 acyl-CoA synthetase; 24.2 7.1E+02 0.015 25.8 11.0 82 238-322 23-106 (501)
277 PRK12492 long-chain-fatty-acid 24.1 6.8E+02 0.015 26.5 11.0 105 57-163 207-322 (562)
278 PRK08751 putative long-chain f 24.0 5.4E+02 0.012 27.2 10.2 107 56-164 207-319 (560)
279 PRK02261 methylaspartate mutas 23.7 4.4E+02 0.0094 22.0 8.0 54 103-156 5-62 (137)
280 PLN02430 long-chain-fatty-acid 23.6 9.9E+02 0.021 26.1 12.4 86 238-326 75-162 (660)
281 PRK07476 eutB threonine dehydr 23.3 4.5E+02 0.0098 25.7 8.6 49 109-157 74-122 (322)
282 PRK04813 D-alanine--poly(phosp 23.1 8.4E+02 0.018 25.1 13.4 112 68-182 152-271 (503)
283 PRK06178 acyl-CoA synthetase; 22.9 4.3E+02 0.0093 28.1 9.2 86 239-327 58-145 (567)
284 COG4821 Uncharacterized protei 22.8 2.5E+02 0.0054 25.3 5.7 56 81-157 84-140 (243)
285 PRK07867 acyl-CoA synthetase; 22.7 4.6E+02 0.01 27.6 9.2 86 238-325 27-114 (529)
286 PLN02356 phosphateglycerate ki 22.7 5.7E+02 0.012 26.2 9.2 67 89-156 91-158 (423)
287 KOG1794 N-Acetylglucosamine ki 22.7 1.4E+02 0.003 28.5 4.4 72 384-458 70-143 (336)
288 COG2236 Predicted phosphoribos 22.4 1.7E+02 0.0038 26.1 4.9 33 75-107 5-37 (192)
289 KOG1250 Threonine/serine dehyd 22.2 3.1E+02 0.0067 27.6 6.8 63 93-158 108-170 (457)
290 COG1167 ARO8 Transcriptional r 22.1 3.2E+02 0.007 28.4 7.6 59 99-158 177-236 (459)
291 PF09153 DUF1938: Domain of un 21.9 83 0.0018 23.5 2.2 33 75-111 29-62 (86)
292 PRK12582 acyl-CoA synthetase; 21.9 3.3E+02 0.0072 29.5 8.1 81 237-320 78-165 (624)
293 cd01448 TST_Repeat_1 Thiosulfa 21.8 2.3E+02 0.0051 22.7 5.4 40 88-127 66-106 (122)
294 TIGR02372 4_coum_CoA_lig 4-cou 21.2 8.5E+02 0.018 24.5 14.1 90 68-163 104-199 (386)
295 PF00290 Trp_syntA: Tryptophan 21.2 6.8E+02 0.015 23.7 8.8 87 43-148 73-164 (259)
296 cd00401 AdoHcyase S-adenosyl-L 21.2 7.5E+02 0.016 25.3 9.7 83 76-158 10-95 (413)
297 KOG0025 Zn2+-binding dehydroge 20.6 3.4E+02 0.0073 26.2 6.4 64 97-160 157-221 (354)
298 PRK10287 thiosulfate:cyanide s 20.5 3.7E+02 0.008 21.2 6.0 50 75-131 41-90 (104)
299 PLN02409 serine--glyoxylate am 20.4 5.6E+02 0.012 25.9 9.0 74 81-155 39-114 (401)
300 cd02067 B12-binding B12 bindin 20.4 4.5E+02 0.0097 21.0 7.0 41 117-157 19-59 (119)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-76 Score=595.21 Aligned_cols=526 Identities=45% Similarity=0.746 Sum_probs=474.8
Q ss_pred Ccceecccc--CCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCC
Q 008787 22 GPVYRNLLA--SNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAE 99 (553)
Q Consensus 22 ~~~~r~~~~--~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~ 99 (553)
++.+|+... ..+++..+....|+++.|++.+..+|+.+++-.....+ ..+.|+.+||.|..+++.+++..|+++|++
T Consensus 53 ~~~~~s~~~~~~~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~ 131 (691)
T KOG1256|consen 53 DGSRRSAVLPREELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVK 131 (691)
T ss_pred CCceeeeeccCCCCCCCCCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCC
Confidence 389999988 56667777889999999999999999999999873323 568899999999999999999999999999
Q ss_pred CCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEc-chhhhhhhccccc-cccCccEEE
Q 008787 100 PGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQ-DKKVKELLSPDCR-SAQRLRVMV 177 (553)
Q Consensus 100 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~-~~~~~~~~~~~~~-~~~~~~~~~ 177 (553)
+++.|+|+.-|++||++..+||...|.++||+....+++++.++++.+++.++|++ ++....+++.... ..+.++.++
T Consensus 132 ~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI 211 (691)
T KOG1256|consen 132 EDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAII 211 (691)
T ss_pred CCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999 6677777777665 367899999
Q ss_pred EecCCchHHHHHHhhCCceeeeHHHHHhccccccccc-CCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhh
Q 008787 178 CFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEI-LPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFL 256 (553)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~ 256 (553)
.+++............+...++|+++.+.+....... .++.++|.|.|+|||||||.||||++||+|++..+.......
T Consensus 212 ~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~ 291 (691)
T KOG1256|consen 212 QLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLS 291 (691)
T ss_pred EecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhh
Confidence 9999998888888888999999999999986655555 478999999999999999999999999999999665433332
Q ss_pred ccccCC-CCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHH
Q 008787 257 DQFEDK-MTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALE 335 (553)
Q Consensus 257 ~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 335 (553)
...... ....|++++++|+.|++..+.-...+..|+.+.+.++|+..+.+.+++.+||.+.++|.+|+++.+.+++...
T Consensus 292 ~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~ 371 (691)
T KOG1256|consen 292 AAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQ 371 (691)
T ss_pred hcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHh
Confidence 221112 2347999999999999999987777899999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHHH-HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEee
Q 008787 336 ELRPLRRRIFDALYKYKL-AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQG 414 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~ 414 (553)
....+++.+|+++.+.+. -.+..|-.+. ...++|++.|+++++.+|+++|.+++|++|+++++..+++..+|++|+++
T Consensus 372 ~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eG 450 (691)
T KOG1256|consen 372 KSGFLKRKLFNFAMAYKLEHRLMKGKSRS-RDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEG 450 (691)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhCCCCcc-cchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeec
Confidence 999999999999999999 4466664443 68899999999999999999999999999999999999999999999999
Q ss_pred eccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCC
Q 008787 415 YGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDG 493 (553)
Q Consensus 415 YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g 493 (553)
||.||+++.++...+.+. ..+++|.|+|++++|++|+++.+....+ ..|||||+|++++.|||++|+.|++++ .||
T Consensus 451 YGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDG 527 (691)
T KOG1256|consen 451 YGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDG 527 (691)
T ss_pred ccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccc
Confidence 999999977776666555 5599999999999999999888877665 479999999999999999999999999 999
Q ss_pred ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 494 WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 494 ~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|++|||+|+++++|.|.+.||.++++++++|++|.|+.||++..+.+.|.+.+|.|.++
T Consensus 528 WLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~ 586 (691)
T KOG1256|consen 528 WLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSL 586 (691)
T ss_pred ccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcc
Confidence 99999999999999999999999999999999999999999999999999999999875
No 2
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.8e-76 Score=633.16 Aligned_cols=549 Identities=52% Similarity=0.944 Sum_probs=439.9
Q ss_pred ccccccccccCCCCCCCCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHH
Q 008787 4 FAAQVEEGKEGKDGKPSVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVY 83 (553)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~ 83 (553)
+-.++.+.+...+..|.++++||+.....+++.....+.++.++|.++++++|+++|+.+....++..+.++.+||+||.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~ 86 (666)
T PLN02614 7 FIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVY 86 (666)
T ss_pred eEEEecccccCCCCCCCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHH
Confidence 34567777888888999999999998777776545667899999999999999999998531102223456679999999
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 84 EEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 84 ~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
++++++|++|+++|+++||+|+|+++|++++++++|||+++|++++|+++.++++++.+++++++++++|++......+.
T Consensus 87 ~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 166 (666)
T PLN02614 87 DIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELF 166 (666)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887655443
Q ss_pred ccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccH
Q 008787 164 SPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHE 243 (553)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~ 243 (553)
.........+..++.++..................++++++........+.....++++++|+|||||||.||||++||+
T Consensus 167 ~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~ 246 (666)
T PLN02614 167 KTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNE 246 (666)
T ss_pred HhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecH
Confidence 32221112345566665422111111111123356788776543222222233467899999999999999999999999
Q ss_pred hHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHH
Q 008787 244 TIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVF 323 (553)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~ 323 (553)
+++..+......+......+..+|++++++|++|.++......++..|+++++.++++..+++.+++++||+++++|.++
T Consensus 247 nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~ 326 (666)
T PLN02614 247 SIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVL 326 (666)
T ss_pred HHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHH
Confidence 99987765443321111246788999999999999998766667889999998877999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHH
Q 008787 324 EKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFL 403 (553)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~ 403 (553)
..|.+.+.......+.+...++.++.+.+...+..+.......+.++.+.++..++.+++++|.+++||+++++++.+++
T Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~ 406 (666)
T PLN02614 327 DRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFL 406 (666)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHH
Confidence 99998777666666666777888887777666655433344466778888888888888999999999999998865544
Q ss_pred HHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCCh
Q 008787 404 RVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNP 483 (553)
Q Consensus 404 ~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~ 483 (553)
+...++++++.||+||+++..+...+......+++|+|+|+++++|+|+++++..+++.|+.|||+|+||+++.|||++|
T Consensus 407 ~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~p 486 (666)
T PLN02614 407 RVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKRE 486 (666)
T ss_pred HHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCH
Confidence 44335899999999998876554444333345899999999999999855544456677899999999999999999999
Q ss_pred hhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 484 DLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 484 ~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+.|++.|.||||+|||+|++|+||+|+|+||.+|+|++++|++|+|.+||++|.+||.|.+|+|+|++.
T Consensus 487 e~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~ 555 (666)
T PLN02614 487 DLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF 555 (666)
T ss_pred HHhhhhhccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC
Confidence 999999999999999999999999999999999999976899999999999999999999999999973
No 3
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-74 Score=623.90 Aligned_cols=543 Identities=50% Similarity=0.899 Sum_probs=443.0
Q ss_pred cccccccCCCCCCCCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHH
Q 008787 7 QVEEGKEGKDGKPSVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEV 86 (553)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v 86 (553)
-++|..-.++.+|.++++||+....+.+........++.++|.++++++|+++|+......++..++++++||+||.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v 87 (660)
T PLN02861 8 KVEESRPATGGKPSAGPVYRSIYAKDGLLDLPADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAA 87 (660)
T ss_pred eeccCCCCCCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHH
Confidence 35566666678899999999998777776666777899999999999999999997531113334667889999999999
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccc
Q 008787 87 LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD 166 (553)
Q Consensus 87 ~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~ 166 (553)
+++|++|.++|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|++......+....
T Consensus 88 ~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~ 167 (660)
T PLN02861 88 IRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCL 167 (660)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877655543332
Q ss_pred cccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHH
Q 008787 167 CRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIA 246 (553)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~ 246 (553)
......++.++.+++.................+|.++...... .....+..++++++|+|||||||.||||++||++++
T Consensus 168 ~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~ 246 (660)
T PLN02861 168 PKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSL-DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAII 246 (660)
T ss_pred hhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcc-cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHH
Confidence 2221245666666543221111111112345677777654321 122234568999999999999999999999999999
Q ss_pred HHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHH
Q 008787 247 TFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKI 326 (553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l 326 (553)
..+......+......+..+|++++.+|++|.+++...+.+++.|+++++.+.++..+++.|++++||+++++|.++..|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l 326 (660)
T PLN02861 247 AEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRI 326 (660)
T ss_pred HHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHH
Confidence 88766544331111124678999999999999998776668999999998877999999999999999999999999999
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHh
Q 008787 327 HEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT 406 (553)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~ 406 (553)
.+.+.........+...+++++.+.+...+..+.......+.++.+.++.+++.+++++|.+++||+++++++.+++ +.
T Consensus 327 ~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~-~~ 405 (660)
T PLN02861 327 YTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFL-RV 405 (660)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHH-HH
Confidence 98887777777788888999999999888876655555567788888999999999999999999999999986644 44
Q ss_pred cCC-ceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhh
Q 008787 407 CCA-FLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDL 485 (553)
Q Consensus 407 ~~~-~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~ 485 (553)
++. .+++.||+||+++.++..........+++|+|+|+++++++++++++.....+++.|||+|+||+++.||+++|+.
T Consensus 406 ~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~ 485 (660)
T PLN02861 406 TSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDL 485 (660)
T ss_pred HcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHH
Confidence 554 7999999999987665443333233589999999999999985444433334556899999999999999999999
Q ss_pred hhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 486 TRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 486 ~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
|++.|.||||+|||+|++|+||+|+|+||.+|+|++++|++|+|.+||++|.+||.|.+|+|+|++
T Consensus 486 T~~~f~dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~ 551 (660)
T PLN02861 486 TEEVLIDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS 551 (660)
T ss_pred HHhhhhccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC
Confidence 999999999999999999999999999999999997689999999999999999999999999987
No 4
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.4e-74 Score=620.52 Aligned_cols=551 Identities=79% Similarity=1.323 Sum_probs=459.0
Q ss_pred CCcccccccccccCCCCCCCCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHH
Q 008787 1 MKIFAAQVEEGKEGKDGKPSVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYK 80 (553)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~ 80 (553)
||-.++++.+..++.+.+|.++++||+....+.++..++.++|+.++|.+.++++|+++|+.+....++..+.++.+||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~ 80 (660)
T PLN02430 1 MKSFAAQVEEGVKGKDGKPSVGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYK 80 (660)
T ss_pred CCceeeeecccCCCCCCCCCCCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHH
Confidence 88888888877776678999999999988666676666788999999999999999999997641112334556778999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh
Q 008787 81 EVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK 160 (553)
Q Consensus 81 el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 160 (553)
||.+++.++|.+|.+.|+++||+|+|+++|+++++++++||+++|++++|+++..+++++.++++.++++++|++.....
T Consensus 81 el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~ 160 (660)
T PLN02430 81 EVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIK 160 (660)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred hhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEe
Q 008787 161 ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVL 240 (553)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~ 240 (553)
..........+.+..++.+++............+...++|++++..+...........++++++|+|||||||.||||++
T Consensus 161 ~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~l 240 (660)
T PLN02430 161 ELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVL 240 (660)
T ss_pred HHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEe
Confidence 33222222234556677765533221111112233457888887655332222334468899999999999999999999
Q ss_pred ccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeech
Q 008787 241 THETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVP 320 (553)
Q Consensus 241 th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p 320 (553)
||+++...+.............+..+|++++++|++|.++......++..|+++++...++..+++.+++++||++.++|
T Consensus 241 th~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP 320 (660)
T PLN02430 241 THEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVP 320 (660)
T ss_pred ecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecH
Confidence 99999987765433221112245678999999999999998876677889999988877899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHH
Q 008787 321 RVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVE 400 (553)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~ 400 (553)
.+|+++.+.+........++.+.+++.+.+.+...++.+.......++++.+.++.++..+|+++|.+++||+++++++.
T Consensus 321 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~ 400 (660)
T PLN02430 321 RVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIE 400 (660)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHH
Confidence 99999999888888777888999999999999998887765555667888889999999999999999999999999998
Q ss_pred HHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCcccccc
Q 008787 401 EFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYY 480 (553)
Q Consensus 401 ~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~ 480 (553)
++++...+.+++++||+||+++..+..........+++|.|.|+++++++++++.+..+.+.++.|||+|+||+++.||+
T Consensus 401 ~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~ 480 (660)
T PLN02430 401 EFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYY 480 (660)
T ss_pred HHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCcccccc
Confidence 77776545789999999999887766554444445899999999999999866666566666678999999999999999
Q ss_pred CChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 481 KNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 481 ~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
++|+.+++.|.||||+|||+|++|+||+|++.||.+|+|++++|++|+|.+||+++.+||.|.+|+|+|.+
T Consensus 481 ~~~e~t~~~~~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~ 551 (660)
T PLN02430 481 KNPELTEEVMKDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS 551 (660)
T ss_pred CChHHhhhhhhccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC
Confidence 99999999999999999999999999999999999999997689999999999999999999999999975
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.7e-71 Score=600.62 Aligned_cols=527 Identities=40% Similarity=0.658 Sum_probs=432.2
Q ss_pred CCCCCCCCcceeccccCCCCCC---CCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHH
Q 008787 15 KDGKPSVGPVYRNLLASNGFPS---VDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVS 91 (553)
Q Consensus 15 ~~~~~~~~~~~r~~~~~~~~~~---~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~ 91 (553)
..++.+.+.+||+...+.++.+ ..+...++.++|+++++++|+++|+.++...++..+.++.+||+||.++++++|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~ 93 (651)
T PLN02736 14 EKLQTGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGS 93 (651)
T ss_pred CCCCCCCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHH
Confidence 4455689999998766655533 2355679999999999999999999542101333455678999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcccccccc
Q 008787 92 ALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQ 171 (553)
Q Consensus 92 ~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (553)
+|.++|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|++.+....+..... ..+
T Consensus 94 ~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~-~~~ 172 (651)
T PLN02736 94 GLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS-EIP 172 (651)
T ss_pred HHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh-cCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999877665544332 334
Q ss_pred CccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhh
Q 008787 172 RLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG 251 (553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~ 251 (553)
.+..++.++..................+|+++.........+.....++++++|+|||||||.||||++||++++..+..
T Consensus 173 ~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~ 252 (651)
T PLN02736 173 SVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAG 252 (651)
T ss_pred CceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHH
Confidence 55666666533221111111123346678887765432222233457899999999999999999999999999988877
Q ss_pred chhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHH
Q 008787 252 VDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIK 331 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~ 331 (553)
....+ .+..+|++++.+|++|.+++...+.++..|+++++.++++..+++.|+++++|+++++|.++..|.+.+.
T Consensus 253 ~~~~~-----~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~ 327 (651)
T PLN02736 253 SSLST-----KFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRIYDGIT 327 (651)
T ss_pred HHhcc-----CCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHHHHHHH
Confidence 66555 6778999999999999999987777899999999988899999999999999999999999999999888
Q ss_pred HHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCce
Q 008787 332 KALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFL 411 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i 411 (553)
......+.+++.++.++...+...+..+. ...+.++++.++..+..+++++|.+++||+++++++.+++++.+|+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~ 404 (651)
T PLN02736 328 NAVKESGGLKERLFNAAYNAKKQALENGK---NPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRV 404 (651)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHcCC---CCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCe
Confidence 87777788888888888777665555442 233456777888888888889999999999999999999998889999
Q ss_pred EeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCC-CCCCCCCCeEEEecCCccccccCChhhhhhhc
Q 008787 412 VQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYS-PLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI 490 (553)
Q Consensus 412 ~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~-~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~ 490 (553)
++.||+||+++..+...... ...+++|+|+||++++++|.+++... ...+++.|||+|+||+++.||+++|+.+++.|
T Consensus 405 ~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~ 483 (651)
T PLN02736 405 LEGYGMTETSCVISGMDEGD-NLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVI 483 (651)
T ss_pred EEEechHHhchheeccCCCC-CCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhh
Confidence 99999999987666544433 34488999999999999983332111 11223579999999999999999999999998
Q ss_pred -cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 491 -IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 491 -~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
.||||+|||+|++|+||+|+|+||.+|+|++++|++|+|.+||++|.+||.|.+|+|+|..
T Consensus 484 ~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~ 545 (651)
T PLN02736 484 DEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDS 545 (651)
T ss_pred ccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEecC
Confidence 6999999999999999999999999999997679999999999999999999999999964
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-71 Score=592.49 Aligned_cols=515 Identities=26% Similarity=0.403 Sum_probs=414.9
Q ss_pred CCCCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHc-
Q 008787 18 KPSVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS- 96 (553)
Q Consensus 18 ~~~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~- 96 (553)
...++++||..+..+..+ .....++.++|.++++++|+++|+++. + ....++.+||+||.+++.++|++|.+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~p~~~Al~~~---~-~g~~~~~~Ty~el~~~v~~~A~~L~~~~ 112 (746)
T PTZ00342 39 NENESSVYCMKDHKKKSS--LYVYKHIMKLLLEKYKLNNNKIAIVEH---S-CGEPQNYITYGNFFKKVLSFSHSLNTYE 112 (746)
T ss_pred CCCCCCceecCchhhccc--ccccchHHHHHHHHHhhcCCceeEecc---C-CCCCceeeeHHHHHHHHHHHHHHHHHHh
Confidence 335566999777666622 234789999999999999999999853 1 122367899999999999999999974
Q ss_pred --CCCCC-----------CEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 97 --GAEPG-----------CRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 97 --gl~~g-----------d~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
|+++| |+|+++++|+++|+++.+||+++|++.+|+++.++++++.++|++++++++|++.+....+.
T Consensus 113 ~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~ 192 (746)
T PTZ00342 113 GKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLL 192 (746)
T ss_pred hcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999887776665
Q ss_pred ccccccccCccEEEEecCCchH---------------------------------------------------------H
Q 008787 164 SPDCRSAQRLRVMVCFTSLTAE---------------------------------------------------------Q 186 (553)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------------~ 186 (553)
+.. ...+.++.+++++..... .
T Consensus 193 ~~~-~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (746)
T PTZ00342 193 ERK-NELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDL 271 (746)
T ss_pred Hhh-ccCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHH
Confidence 443 234566777777642110 0
Q ss_pred HHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCC
Q 008787 187 KEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVD 266 (553)
Q Consensus 187 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~ 266 (553)
.......+.....|+++.... ....+..+..++++++|+|||||||.||||++||+|+++.+....... .......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~---~~~~~~~ 347 (746)
T PTZ00342 272 KEKAKKLGISIILFDDMTKNK-TTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS---IFKKYNP 347 (746)
T ss_pred HHHhhcCCCEEEEHHHHHhhc-ccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc---cccCCCC
Confidence 000000112233444444332 112223345689999999999999999999999999998876543221 0012345
Q ss_pred cEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 267 DVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 267 ~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
+++++++|++|.+++...+.+++.|+++++.++++..+++.|++++||+++++|.+|.+|.+.+.......+.+.+.+++
T Consensus 348 d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~ 427 (746)
T PTZ00342 348 KTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVK 427 (746)
T ss_pred CeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 89999999999999987777899999999988899999999999999999999999999998887777777777888888
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHH--HHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCce
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLL--AFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPT 424 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~ 424 (553)
++...+....... ....++.+ .++++++.+++++|.+++||+++++++.++++..+|++++++||+||+++..
T Consensus 428 ~a~~~~~~~~~~~-----~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~ 502 (746)
T PTZ00342 428 KILSLRKSNNNGG-----FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPI 502 (746)
T ss_pred HHHHHHHHhhcCC-----cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCccccee
Confidence 8888776654322 12334333 5788899999999999999999999999999998899999999999998766
Q ss_pred eeccCCCccccCccCCCC-CCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEE
Q 008787 425 TVCFPDEMCMVGTAGPVS-VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQ 502 (553)
Q Consensus 425 ~~~~~~~~~~~~~~G~~~-~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~ 502 (553)
+...... ...+++|+|+ |+++++++|.++.. ....++.|||+++||+++.||+++|+.|+++| .||||+|||+|+
T Consensus 503 ~~~~~~~-~~~gsvG~p~~pg~e~ki~d~~~~~--~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~ 579 (746)
T PTZ00342 503 FVQHADD-NNTESIGGPISPNTKYKVRTWETYK--ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQ 579 (746)
T ss_pred eeccCCC-CCcccccCcCCCcEEEEEecccccc--cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEE
Confidence 6554433 3458999998 99999999843222 11223579999999999999999999999999 699999999999
Q ss_pred EccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 503 ILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 503 ~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
+|+||+|+|+||.+|+|++++|++|+|.+||+++.+||.|.+|+|+|++
T Consensus 580 ~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~ 628 (746)
T PTZ00342 580 INKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDD 628 (746)
T ss_pred ECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccC
Confidence 9999999999999999997789999999999999999999999999975
No 7
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.6e-71 Score=566.23 Aligned_cols=483 Identities=35% Similarity=0.572 Sum_probs=402.4
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++...+.++++.+|+.+++... ..+.++.+||+|+.+++.++|.+|+..|++.||+|+|++.|+++|+++.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a 89 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYK-----ELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLA 89 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeee-----cCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 578899999999999998898865 467889999999999999999999999997799999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecC----CchHHHHHHhh-CCc
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS----LTAEQKEMAVQ-TGI 195 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~ 195 (553)
|+.+|++.||+.+..+++++.++|++++++++|++..............++.........+ ........... ...
T Consensus 90 ~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (613)
T COG1022 90 ILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDE 169 (613)
T ss_pred HHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccc
Confidence 9999999999999999999999999999999999987655544444333222111111111 00000000000 000
Q ss_pred eeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCC-CCCCcEEEEecC
Q 008787 196 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDK-MTVDDVYLSFLP 274 (553)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p 274 (553)
....+ . . ..........+..++|.|.|+|||||||.||||++||+|+++++......+ . ..++|++++++|
T Consensus 170 ~~~~~-~-~-~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~-----~~~~~~d~~LsfLP 241 (613)
T COG1022 170 GISLF-L-I-DSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVL-----PPIGPGDRVLSFLP 241 (613)
T ss_pred cchhh-h-h-cccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhC-----CCCCCCcEEEEeCc
Confidence 11111 1 1 111122233567899999999999999999999999999999999988877 4 789999999999
Q ss_pred hHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 275 LAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 275 ~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
+.|++..++.......++..++...++..++..+++++||+++++|.+|+.+.+.+.+...+.+..+..+|.++.+.+..
T Consensus 242 laHi~Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~ 321 (613)
T COG1022 242 LAHIFERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYK 321 (613)
T ss_pred HHHHHHHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 99999998754444455555666669999999999999999999999999999999999999998888899999987754
Q ss_pred HHhc---cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC
Q 008787 355 WMNM---GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE 431 (553)
Q Consensus 355 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~ 431 (553)
.++. +-.........+++.|+++++.+|.++|++++||+++++++..+++.. |++++++||+||+++.++.+++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGlTEts~~~~v~~~~~ 400 (613)
T COG1022 322 KISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGLTETSAVVSVNPPDR 400 (613)
T ss_pred HHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecccccccceEEccccC
Confidence 4431 111111122378999999999999999999999999999999999997 899999999999999999987776
Q ss_pred ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEE
Q 008787 432 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVK 510 (553)
Q Consensus 432 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~ 510 (553)
... +++|.|+|+++++|+| .|||+||||+||.|||++|+.|+++| .||||+|||+|.+|++|+|+
T Consensus 401 ~~~-gtvG~p~p~~evKI~d-------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~ 466 (613)
T COG1022 401 FVL-GTVGKPLPGIEVKIAD-------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLV 466 (613)
T ss_pred ccc-CCcCCcCCCceEEEcc-------------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEE
Confidence 555 8999999999999999 59999999999999999999999999 69999999999999999999
Q ss_pred EEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 511 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 511 ~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
++||.+|+|++++|++|.|..||+.+.++|.|.+++|+|+.
T Consensus 467 i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~ 507 (613)
T COG1022 467 ITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDD 507 (613)
T ss_pred EeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecC
Confidence 99999999999999999999999999999999999999954
No 8
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.1e-69 Score=587.74 Aligned_cols=527 Identities=34% Similarity=0.582 Sum_probs=423.0
Q ss_pred CCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecc--------cCC------CCCCceEeeHHHHHHH
Q 008787 20 SVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPF--------VDG------KFGPYVWKTYKEVYEE 85 (553)
Q Consensus 20 ~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~--------~d~------~~~~~~~~Ty~el~~~ 85 (553)
.++.+|||...........+...|+.++|.++++++||++|+..... .++ ..++++.+||+||.++
T Consensus 36 ~~~~~~r~~~~~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~ 115 (696)
T PLN02387 36 EPGYAIRNARFPELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFER 115 (696)
T ss_pred CCCCceecCccccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHH
Confidence 34446999996643334446678999999999999999999954210 011 1256778999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcc
Q 008787 86 VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 86 v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
++++|++|.++|+++||+|+++++|+++++++++||+++|++++|+++.++++++.++++.++++++|++.+....+...
T Consensus 116 v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~ 195 (696)
T PLN02387 116 VCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDI 195 (696)
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777666443
Q ss_pred ccccccCccEEEEecCCchHHHHH-HhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHh
Q 008787 166 DCRSAQRLRVMVCFTSLTAEQKEM-AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHET 244 (553)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~ 244 (553)
. ...+.++.++.+++........ .........+|+++...+...........++++++|+|||||||.||||++||++
T Consensus 196 ~-~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~ 274 (696)
T PLN02387 196 S-SQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGN 274 (696)
T ss_pred h-hccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHH
Confidence 3 2335567777776543211110 0112334567888776543322233345689999999999999999999999999
Q ss_pred HHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC----C-----hHHHHHHhhhhcCcE
Q 008787 245 IATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG----D-----LNALRDDLMELKPTL 315 (553)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~----~-----~~~~~~~i~~~~~t~ 315 (553)
++..+......+ ..+..+|++++++|++|.+++.....++..|+++.+... + +..++..+++++||+
T Consensus 275 l~~~~~~~~~~~----~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~ 350 (696)
T PLN02387 275 IVATVAGVMTVV----PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTL 350 (696)
T ss_pred HHHHHHHHHhhc----CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcE
Confidence 998877654332 146788999999999999998876667777777665322 1 234567899999999
Q ss_pred EeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccC--CcCCcchHHHHHHHHHHHHHhCCceeEEEEcCC
Q 008787 316 LAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGY--KQREASPLADLLAFRKVKARLGGRLRLVISGGA 393 (553)
Q Consensus 316 l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~ 393 (553)
++++|.++.+|.+.........+.+...++..+...++..+...+ .......+++.+.++..+..+|+++|.+++||+
T Consensus 351 ~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGa 430 (696)
T PLN02387 351 MTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGA 430 (696)
T ss_pred EEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCC
Confidence 999999999999887776666677778888888777766554221 112346688999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCC-CCCCCCeEEEec
Q 008787 394 PLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPL-DDPPCGEVCVRG 472 (553)
Q Consensus 394 ~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~-~~~~~Gei~v~~ 472 (553)
++++++.++++..+|++++++||+||+++.++...... ...+++|.|+|+++++++|.++++.... .+++.|||+|+|
T Consensus 431 pl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~-~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrG 509 (696)
T PLN02387 431 PLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDD-TSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGG 509 (696)
T ss_pred CCCHHHHHHHHHHcCCCeeEeechhhcccceeecCccc-CCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEecc
Confidence 99999999998888999999999999987766554433 3348999999999999999555543322 233579999999
Q ss_pred CCccccccCChhhhhhhcc---CC--ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEE
Q 008787 473 KTLFSGYYKNPDLTRESII---DG--WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSI 547 (553)
Q Consensus 473 ~~~~~gy~~~~~~~~~~~~---~g--~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V 547 (553)
|+++.||+++|+.|.++|. +| ||+|||+|++|+||+|++.||.+|+|++++|++|+|.+||++|.+||.|.+|+|
T Consensus 510 p~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V 589 (696)
T PLN02387 510 PSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMV 589 (696)
T ss_pred CcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEE
Confidence 9999999999999999882 35 999999999999999999999999999867999999999999999999999999
Q ss_pred EecCC
Q 008787 548 SYSSV 552 (553)
Q Consensus 548 ~g~~~ 552 (553)
+|++.
T Consensus 590 ~g~~~ 594 (696)
T PLN02387 590 HADPF 594 (696)
T ss_pred EecCC
Confidence 99874
No 9
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.8e-69 Score=515.47 Aligned_cols=526 Identities=36% Similarity=0.663 Sum_probs=461.2
Q ss_pred CCCCCcceeccccCCCCCCCC-CCcccHHHHHHHHHHcCCCCCceeeecc--------cCCC------CCCceEeeHHHH
Q 008787 18 KPSVGPVYRNLLASNGFPSVD-SDLNTAWDIFSMSVQKYPGNRMLGWRPF--------VDGK------FGPYVWKTYKEV 82 (553)
Q Consensus 18 ~~~~~~~~r~~~~~~~~~~~~-~~~~~l~~~l~~~a~~~p~~~al~~~~~--------~d~~------~~~~~~~Ty~el 82 (553)
+++++++|||....+++...+ +...|+++++.+.++++.++.++-.++. +|++ -+.+..+||.|+
T Consensus 16 n~~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev 95 (678)
T KOG1180|consen 16 NEHETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEV 95 (678)
T ss_pred CCCCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHH
Confidence 348999999999877777655 5679999999999999999999866533 1232 356678999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCE-EEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhh
Q 008787 83 YEEVLQIVSALRASGAEPGCR-VGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKE 161 (553)
Q Consensus 83 ~~~v~~la~~L~~~gl~~gd~-V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 161 (553)
..++.++|.+|.+.|++++++ ++++++.+.+|..+++||++.+.++|-+...+..+.+.+-|++++++.||++.+.+..
T Consensus 96 ~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~k 175 (678)
T KOG1180|consen 96 YERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPK 175 (678)
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHH
Confidence 999999999999999997777 9999999999999999999999999999999999999999999999999999999987
Q ss_pred hhccccccccCccEEEEecCCchHHHH--HH--hhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCce
Q 008787 162 LLSPDCRSAQRLRVMVCFTSLTAEQKE--MA--VQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKG 237 (553)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 237 (553)
+..... ..+.++.++.+++.+..... .. .......++|+++++.+.....+..++.++|+|+|+|||||||.|||
T Consensus 176 l~~~l~-~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKG 254 (678)
T KOG1180|consen 176 LKAPLK-QAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKG 254 (678)
T ss_pred HHHHHh-ccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCce
Confidence 755544 45788899999864322211 11 22467899999999998877667777789999999999999999999
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC----C-hHHHH----HHh
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG----D-LNALR----DDL 308 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~----~-~~~~~----~~i 308 (553)
|+++|.|+++.+........ .+++.|+++.++|+.|++-+.+-+.+++.|+.+-..+. | ...+. -.+
T Consensus 255 Vml~H~NiVA~~~G~~~~v~----~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~ 330 (678)
T KOG1180|consen 255 VMLTHSNIVAGVTGVGENVP----ELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDL 330 (678)
T ss_pred EEEecccHHhhhhhhcccCc----ccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCcc
Confidence 99999999999988776652 57899999999999999999999999999999877543 1 11111 124
Q ss_pred hhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh-ccCCcCCcchHHHHHHHHHHHHHhCCceeE
Q 008787 309 MELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN-MGYKQREASPLADLLAFRKVKARLGGRLRL 387 (553)
Q Consensus 309 ~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 387 (553)
..+|||++.++|..|.++-+.+.+.....+.+...+|..+...|+..++ .+. -.++++.+.|++++..+|.+||+
T Consensus 331 ~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~----~s~~ld~lVFkKIr~~lGG~lR~ 406 (678)
T KOG1180|consen 331 TELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGP----GSPLLDALVFKKIRALLGGNLRY 406 (678)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCC----chhhHHHHHHHHHHHHhCCceEE
Confidence 5799999999999999999999999999999999999999999998887 442 36789999999999999999999
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCe
Q 008787 388 VISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGE 467 (553)
Q Consensus 388 i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Ge 467 (553)
+++||+|++++.++++.-.+.+++.++||.||+++.++.....+... +.+|.|++..+++++|.++++...-.....||
T Consensus 407 ~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~-g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGE 485 (678)
T KOG1180|consen 407 ILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFST-GRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGE 485 (678)
T ss_pred EEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhccc-ccccCCccceEEEEEEhhhcCccCCCCCCCce
Confidence 99999999999999999999999999999999999888877666555 79999999999999999999887765556899
Q ss_pred EEEecCCccccccCChhhhhhhc--cCC--ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcc
Q 008787 468 VCVRGKTLFSGYYKNPDLTRESI--IDG--WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIE 543 (553)
Q Consensus 468 i~v~~~~~~~gy~~~~~~~~~~~--~~g--~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~ 543 (553)
||++|+++..||+++++.|++.| .|| ||+|||+|++++||.|.+.+|.+|++++.+|+.|+..-||++++..|.|.
T Consensus 486 I~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~ 565 (678)
T KOG1180|consen 486 ILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVD 565 (678)
T ss_pred EEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchh
Confidence 99999999999999999999999 489 99999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCC
Q 008787 544 DVSISYSSVS 553 (553)
Q Consensus 544 ~~~V~g~~~~ 553 (553)
..+|++++.+
T Consensus 566 NICvyAd~~~ 575 (678)
T KOG1180|consen 566 NICVYADSNK 575 (678)
T ss_pred heEEeccccc
Confidence 9999998753
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-66 Score=562.23 Aligned_cols=519 Identities=31% Similarity=0.532 Sum_probs=408.6
Q ss_pred CCCCcceeccccCC----CCCCCCCCcccHHHHHHHHHHcCCCCCceeeecc----------cCCC--------CCCceE
Q 008787 19 PSVGPVYRNLLASN----GFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPF----------VDGK--------FGPYVW 76 (553)
Q Consensus 19 ~~~~~~~r~~~~~~----~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~----------~d~~--------~~~~~~ 76 (553)
+..+++||...... .+....+...++.++|.++++++|+++|+.+... .++. .++++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (700)
T PTZ00216 42 ENASAIYRIAGVTDEEHERLRNEWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRY 121 (700)
T ss_pred CCCCCcccCcccccchhcccccccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceE
Confidence 35688999866443 2222223567999999999999999999987510 0111 124689
Q ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 77 KTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 77 ~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
+||+||.++++++|+.|.++|+++||+|+|+++|+++++++++||+++|++++|+++..+++++.+++++++++++|++.
T Consensus 122 lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~ 201 (700)
T PTZ00216 122 ITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNG 201 (700)
T ss_pred eEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhccc--cccc-ccCCCCCCCeEEEEecCCCCC
Q 008787 157 KKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK--VNEM-EILPPQPFNICTIMYTSGTSG 233 (553)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~-~~~~~~~~~~~~i~~TSGtTG 233 (553)
.....+.............++.+++.... .........+|+++...+. .... ...+..++++++++|||||||
T Consensus 202 ~~~~~l~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG 277 (700)
T PTZ00216 202 KNVPNLLRLMKSGGMPNTTIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTG 277 (700)
T ss_pred HHHHHHHHhhhhccCCceEEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCC
Confidence 76655443332111112245555442211 0112335678888876542 1111 123346889999999999999
Q ss_pred CCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHH-------
Q 008787 234 DPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRD------- 306 (553)
Q Consensus 234 ~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~------- 306 (553)
.||||++||+++++.+......+......+..++++++++|++|.+++.....++..|+++++ .++..+.+
T Consensus 278 ~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~--~~~~~l~~~~~~~~~ 355 (700)
T PTZ00216 278 DPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGF--GSPRTLTDTFARPHG 355 (700)
T ss_pred cCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEE--CCHHHhhhhhccccc
Confidence 999999999999988776544321111123578999999999999998766666777887766 34555554
Q ss_pred HhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCcee
Q 008787 307 DLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLR 386 (553)
Q Consensus 307 ~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 386 (553)
.+++++||++.++|.+++.+.+.........+.+.+.++.++...++..+..+. ..+.++.+.++..+..+++++|
T Consensus 356 ~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~g~~lr 431 (700)
T PTZ00216 356 DLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK----DTPYWNEKVFSAPRAVLGGRVR 431 (700)
T ss_pred hHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC----CCchHHHHHHHHHHHHhCCcEE
Confidence 688999999999999999999888777777777888888888888877665442 2456788889999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCC
Q 008787 387 LVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCG 466 (553)
Q Consensus 387 ~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~G 466 (553)
.+++||+++++++.++++..++ ++++.||+||+++..+...... ...+++|+|+|+++++|+| +++......+++.|
T Consensus 432 ~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~-~~~~svG~p~~g~evkI~d-~~~~~~~~~~~~~G 508 (700)
T PTZ00216 432 AMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVCCGGIQRTGD-LEPNAVGQLLKGVEMKLLD-TEEYKHTDTPEPRG 508 (700)
T ss_pred EEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccccccccCCCC-CCCCCcCCcCCCeEEEEee-chhhccCCCCCCCc
Confidence 9999999999999999888878 9999999999987666544333 3348999999999999999 44322233345689
Q ss_pred eEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcce-
Q 008787 467 EVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIED- 544 (553)
Q Consensus 467 ei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~- 544 (553)
||+|+||+++.||+++|+.|++.| .||||+|||+|++|+||+|+|+||.+|+|+..+|++|+|.+||+++.+||.|.+
T Consensus 509 EL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~ 588 (700)
T PTZ00216 509 EILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPN 588 (700)
T ss_pred eEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccc
Confidence 999999999999999999999999 799999999999999999999999999998458999999999999999999997
Q ss_pred -EEEEec
Q 008787 545 -VSISYS 550 (553)
Q Consensus 545 -~~V~g~ 550 (553)
++|++.
T Consensus 589 ~~~v~~~ 595 (700)
T PTZ00216 589 GVCVLVH 595 (700)
T ss_pred eEEEEEe
Confidence 344443
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=8.4e-68 Score=500.21 Aligned_cols=453 Identities=23% Similarity=0.324 Sum_probs=386.1
Q ss_pred cCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC
Q 008787 30 ASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGA 109 (553)
Q Consensus 30 ~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~ 109 (553)
..+|-...+-...|++++++-.+++-||+.|+++. .. + .++||+|+.+.++++|+.|...|+++||+|++..|
T Consensus 38 ~~~g~~~ipl~~~Tigq~l~~~t~~v~dkea~Vf~---~e--g--~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgp 110 (596)
T KOG1177|consen 38 YVHGCSQIPLDSETIGQLLETTTERVPDKEAAVFD---HE--G--IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGP 110 (596)
T ss_pred ccCCCCCCCcccccHHHHHHHHhhccCcceEEEEe---ec--c--chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecC
Confidence 45555566778899999999999999999999885 22 1 46999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhh-----hhc------------cccccccC
Q 008787 110 NCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKE-----LLS------------PDCRSAQR 172 (553)
Q Consensus 110 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~------------~~~~~~~~ 172 (553)
|+.+|+.+++||+++|.+.+++||.+...++++.|+..+++++|+....... +++ ...+..+.
T Consensus 111 N~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~ 190 (596)
T KOG1177|consen 111 NSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPE 190 (596)
T ss_pred ChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999998753211 111 11233456
Q ss_pred ccEEEEecCCchHHHHHHhhCCceeeeHHHHHhccccccc-----ccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHH
Q 008787 173 LRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEM-----EILPPQPFNICTIMYTSGTSGDPKGVVLTHETIAT 247 (553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~ 247 (553)
+..++..++... -.+.+.+++++........ ......+++++.|.|||||||.||++.+||.++++
T Consensus 191 lthvi~~~ed~~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~N 261 (596)
T KOG1177|consen 191 LTHVILADEDHP---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLN 261 (596)
T ss_pred ceEEEecCCCCc---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhh
Confidence 666666663322 2356677777766544221 11234679999999999999999999999999999
Q ss_pred HHhhchhhhccccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHH
Q 008787 248 FVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFE 324 (553)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~ 324 (553)
++......+ ++...+++.+..|++|.+|... ++.++..|++++++.. ++...+++|.++++|.++++|++|.
T Consensus 262 na~~vg~r~-----g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~ 336 (596)
T KOG1177|consen 262 NARAVGARA-----GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFV 336 (596)
T ss_pred hHHHHHHHh-----CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHH
Confidence 999988887 7888899999999999999764 8889999999999765 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHH
Q 008787 325 KIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLR 404 (553)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~ 404 (553)
.|++. +....++++ ++|.++.||+++++++.+.+.
T Consensus 337 Dlln~-------------------------------------~~~~~~~~s--------~lr~~vigGa~~s~eLlk~iv 371 (596)
T KOG1177|consen 337 DLLNI-------------------------------------PQKQQVDLS--------SLRKGVIGGAPVSPELLKLIV 371 (596)
T ss_pred HHhcc-------------------------------------hhhccCchh--------hhhhheeCCCCCCHHHHHHHH
Confidence 98752 223333343 899999999999999999998
Q ss_pred HhcCCc-eEeeeccccCCCceeeccCCC--ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccC
Q 008787 405 VTCCAF-LVQGYGLTETCGPTTVCFPDE--MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYK 481 (553)
Q Consensus 405 ~~~~~~-i~~~YG~tE~g~~~~~~~~~~--~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~ 481 (553)
...++. +...||+||++.+.+....++ .....++|..+++.+..+++ .++...+.+ ..|||++||+.++.|||+
T Consensus 372 ~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~--~~Gel~iRGY~tMl~Ywg 448 (596)
T KOG1177|consen 372 NQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLG--TKGELLIRGYSTMLGYWG 448 (596)
T ss_pred HhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccC--CCceEEEEechhheeecC
Confidence 877654 788999999998888766554 34457899999999999999 777666665 679999999999999999
Q ss_pred Chhhhhhhc-cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 482 NPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 482 ~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++.+.++. .|.||+|||+|.+|++|+++++||.+|+|+ ++|++|+|.|||+.|.+||.|.++.|||+++
T Consensus 449 ~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~-rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D 519 (596)
T KOG1177|consen 449 EEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMII-RGGENVYPTELEDFLNKHPLVKEAHVVGVPD 519 (596)
T ss_pred CcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEE-eCCcccChHHHHHHHhhCCCeeeEEEEccCC
Confidence 999998887 889999999999999999999999999999 6999999999999999999999999999986
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.9e-68 Score=537.07 Aligned_cols=435 Identities=28% Similarity=0.416 Sum_probs=354.7
Q ss_pred HHHcCCCC-CceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEeCCchhHHHHHHHHHhcCCE
Q 008787 51 SVQKYPGN-RMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASG--AEPGCRVGIYGANCPQWVEAMEACNALSLI 127 (553)
Q Consensus 51 ~a~~~p~~-~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~g--l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 127 (553)
.+..++++ +.+++. +. .+ +.+||.|+.+++.++|.+|.++| +++||+|++++||+++++++++||+.+|++
T Consensus 25 ~~~~~~~~~~~~i~~---~~-~g--~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~ 98 (537)
T KOG1176|consen 25 PAFVYLDRNTSLVYQ---DS-DG--RELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAV 98 (537)
T ss_pred cccccccCcceEEEe---cC-CC--cEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcc
Confidence 33344444 677664 21 11 58999999999999999999875 899999999999999999999999999999
Q ss_pred EeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee-HHHHHhc
Q 008787 128 CVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS-WDEFLHL 206 (553)
Q Consensus 128 ~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 206 (553)
..+++|..++.++.+.++.++++++|++.+....+.+...... ..++++....... .........+ +..+...
T Consensus 99 ~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ 172 (537)
T KOG1176|consen 99 LNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---LKIIVLTGDEGVI---SISDLVEDLDAFEDLMPE 172 (537)
T ss_pred ccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---CceEEEecccCcc---ccccccccccchhhcccc
Confidence 9999999999999999999999999999998887766553322 3333433320000 0000001112 3333333
Q ss_pred ccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHH
Q 008787 207 GKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEY 286 (553)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 286 (553)
.... . ..+...+|++.+.|||||||.||||++||++++.+........ .+...++.++.+|++|.+|+...+.
T Consensus 173 ~~~~-~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-----~~~~~~v~l~~lPl~H~~Gl~~~~~ 245 (537)
T KOG1176|consen 173 GLPD-G-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW-----ELTSDDVYLCTLPLFHIYGLITLLL 245 (537)
T ss_pred CCCc-c-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc-----cCCCCceEEEechHHHHhHHHHHHH
Confidence 2111 1 4566789999999999999999999999999998876544433 5667899999999999999998777
Q ss_pred H-HHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCC
Q 008787 287 F-FRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQRE 364 (553)
Q Consensus 287 ~-l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (553)
+ +..|.++++.+. +++.+++.+++|++|++.++|.++..|++.
T Consensus 246 ~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~----------------------------------- 290 (537)
T KOG1176|consen 246 SLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKS----------------------------------- 290 (537)
T ss_pred HHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcC-----------------------------------
Confidence 5 555556666666 999999999999999999999999998752
Q ss_pred cchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC-CceEeeeccccCCCceeeccCCCccccCccCCCCC
Q 008787 365 ASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSV 443 (553)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~ 443 (553)
+....+++ +++|.+.+||+++++++.+.+++.++ ..+.+.||+||+|+.++.+......+.+++|++++
T Consensus 291 --p~~~~~~l--------~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~ 360 (537)
T KOG1176|consen 291 --PIVKKYDL--------SSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLP 360 (537)
T ss_pred --CccCcccC--------CccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCcccc
Confidence 22333333 49999999999999999999999998 88999999999998888876665556699999999
Q ss_pred CeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccC-CccccCceEEEccCCcEEEEecccCceecC
Q 008787 444 YSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKIIDRKKNLIKIS 522 (553)
Q Consensus 444 ~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~ 522 (553)
+.++++.+ +.+ ...++++.||||++|++++.||++||++|++.|.+ |||+|||+|++|+||+|+|++|.+|+|+.
T Consensus 361 g~~~~v~~-e~g--~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~- 436 (537)
T KOG1176|consen 361 GVRVKVLD-ETG--VSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKY- 436 (537)
T ss_pred ceEEEeeC-CCC--CCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheee-
Confidence 88888877 444 45556789999999999999999999999999955 99999999999999999999999999997
Q ss_pred CceeecchhHHHHHhcCcCcceEEEEecCCC
Q 008787 523 QGEYVALEYLENVYCVAPIIEDVSISYSSVS 553 (553)
Q Consensus 523 ~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~~ 553 (553)
+|++|+|.|||++|..||.|.||+|||.++.
T Consensus 437 ~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe 467 (537)
T KOG1176|consen 437 GGEQVSPAEIEAVLLTHPDVLEAAVVGIPDE 467 (537)
T ss_pred CCEEeCHHHHHHHHHhCCCccEEEEEccccc
Confidence 8999999999999999999999999999873
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.1e-66 Score=541.88 Aligned_cols=441 Identities=29% Similarity=0.434 Sum_probs=365.8
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
...++.+.|.++++++|+++|+++. +.. + ++||+||.++++++|..|++.|+++||+|+|+++|++++++++|
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~---~~~-~---~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~ 81 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFL---GRG-G---RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFL 81 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEc---CCC-c---eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4588999999999999999999986 331 1 59999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCcee-e
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKP-Y 198 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 198 (553)
||+++|++++|+++.++..++.++++.+++++++++............ ..+....+........ .. .
T Consensus 82 a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~ 149 (534)
T COG0318 82 AALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAE-ALPVVLVVLLVGDADD-----------RLPI 149 (534)
T ss_pred HHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhc-cCCcceEEEecccccc-----------cccc
Confidence 999999999999999999999999999999999999873333322221 1122222222222111 00 2
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCC--CCCCcEEEEecChH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDK--MTVDDVYLSFLPLA 276 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~ 276 (553)
++..+...............++++++++|||||||.||+|++||+|+..+...+...+ . +...|++++++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~~~d~~l~~lPl~ 224 (534)
T COG0318 150 TLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-----GGGLTPDDVVLSWLPLF 224 (534)
T ss_pred cHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-----cccCCCCceEEEecChH
Confidence 4455533322222222236789999999999999999999999999999988877766 5 78889999999999
Q ss_pred HHHHHHHHHH-HHHcCcEEEEec---CChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 008787 277 HILDRVIEEY-FFRRGASVGYYH---GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYK 352 (553)
Q Consensus 277 ~~~g~~~~~~-~l~~g~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
|.+|+...+. .++.|+++++.+ .+++.++..+.++++|++.++|+++..|++......
T Consensus 225 H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~------------------ 286 (534)
T COG0318 225 HIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDD------------------ 286 (534)
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCc------------------
Confidence 9999997655 589999999987 389999999999999999999999999875322111
Q ss_pred HHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC-CceEeeeccccCCCceeeccCCC
Q 008787 353 LAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDE 431 (553)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~~YG~tE~g~~~~~~~~~~ 431 (553)
.+++ +++|.+++||+++++++.+.+++.++ ..+++.||+||++..++......
T Consensus 287 -------------------~~~~-------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 340 (534)
T COG0318 287 -------------------DDLS-------SSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDD 340 (534)
T ss_pred -------------------cccc-------cceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCch
Confidence 0011 13999999999999999999999997 47999999999998777776665
Q ss_pred -ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccC-CccccCceEEEccCCcE
Q 008787 432 -MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVV 509 (553)
Q Consensus 432 -~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~g~~~~dG~l 509 (553)
....+++|+|+|+++++|+| ++++ .+.+ |++|||+|+||+++.||+++|+.+.+.|.+ |||+|||+|++|+||++
T Consensus 341 ~~~~~~~~G~~~pg~~v~Ivd-~~~~-~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l 417 (534)
T COG0318 341 LLAKPGSVGRPLPGVEVRIVD-PDGG-EVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYL 417 (534)
T ss_pred hhhcCCcccccCCCcEEEEEe-CCCC-ccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccE
Confidence 33457789999999999999 5554 3333 789999999999999999999999998865 99999999999999999
Q ss_pred EEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 510 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 510 ~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|+||.+|+|+. +|++|+|.|||+++.+||.|.+|+|+|+++
T Consensus 418 ~i~gR~kd~I~~-gG~ni~p~eiE~~l~~~~~V~~aavvgvpd 459 (534)
T COG0318 418 YIVGRLKDLIIS-GGENIYPEEIEAVLAEHPAVAEAAVVGVPD 459 (534)
T ss_pred EEEeccceEEEe-CCeEECHHHHHHHHHhCCCcceEEEEeCCC
Confidence 999999999995 999999999999999999999999999986
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2e-65 Score=517.16 Aligned_cols=435 Identities=21% Similarity=0.260 Sum_probs=358.4
Q ss_pred ccHHHHHHHHHHc-CCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHHH
Q 008787 42 NTAWDIFSMSVQK-YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 42 ~~l~~~l~~~a~~-~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
|--.++++++.+. .+++.|+++. +...+. +++||+||.+.+.++|+.|++ .|+ +||+|++++|+.++.++++|
T Consensus 9 N~~~n~~dr~~~~~~~~~~aii~~---~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~L 83 (528)
T COG0365 9 NLALNALDRHLEADRPDDTAIIFD---GEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALL 83 (528)
T ss_pred echhhhhhhhhhccCCCceEEEEE---cCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHH
Confidence 3334568888764 5789999997 444344 899999999999999999997 578 99999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcccc-ccc-cCccEEEEecCCchHHHHHHhhCCcee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-RSA-QRLRVMVCFTSLTAEQKEMAVQTGIKP 197 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (553)
||+++|++.+|+.+..+++++...+++++++++|+.+........... ... .....++++....
T Consensus 84 A~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-------------- 149 (528)
T COG0365 84 ATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-------------- 149 (528)
T ss_pred HHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc--------------
Confidence 999999999999999999999999999999999998876554322111 000 0000123322211
Q ss_pred eeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchh-hhccccCCCCCCcEEEEecChH
Q 008787 198 YSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDL-FLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 198 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
..|.++..... ......+.+.+|+++++|||||||+||+|+++|..++........ .+ .+..+|++++..++.
T Consensus 150 ~~~~~~~~~~~-~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~-----~~~~~Dv~w~~ad~G 223 (528)
T COG0365 150 LWYDEAVEKAS-EKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHG-----DLLPGDRFWNSSDPG 223 (528)
T ss_pred ccHHHHhhccC-CCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhh-----CCCCCCEEEeCCCch
Confidence 56777766542 233344478999999999999999999999999977766655443 33 667999999999999
Q ss_pred HHHHHHH-HHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 008787 277 HILDRVI-EEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKY 351 (553)
Q Consensus 277 ~~~g~~~-~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (553)
|..|+.. .+.++..|++++++++ +++.+++.|+++++|++++.|+.++.|.+.-.
T Consensus 224 W~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~-------------------- 283 (528)
T COG0365 224 WIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGL-------------------- 283 (528)
T ss_pred hhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC--------------------
Confidence 9999987 6778999999999876 28999999999999999999999999865211
Q ss_pred HHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC
Q 008787 352 KLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE 431 (553)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~ 431 (553)
.+++++ ++||.+.++|+|++++..+|+.+.+|++|.+.||+||+|++.....+ .
T Consensus 284 -----------------~~~~dl--------ssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~ 337 (528)
T COG0365 284 -----------------GEPYDL--------SSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-P 337 (528)
T ss_pred -----------------cccccc--------hhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-C
Confidence 223333 49999999999999999999999999999999999999966555544 3
Q ss_pred ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC--CccccccCChhhhhhhccCCccccCceEEEccCCcE
Q 008787 432 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK--TLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVV 509 (553)
Q Consensus 432 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~--~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l 509 (553)
... ++.|.|+||+++.++| +++ .++++++ |+|.++.+ .++.+||++|+.+.+++.+.||.|||.+++|+||++
T Consensus 338 ~~~-g~~g~p~pG~~~~vvd-d~g--~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~ 412 (528)
T COG0365 338 VKN-GSSGLPLPGYAVRRVD-DEG--NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYF 412 (528)
T ss_pred cCC-CCCCCCCCCceeEEEC-CCC--CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCE
Confidence 333 5669999999999999 664 4444557 99999986 889999999999999986669999999999999999
Q ss_pred EEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCCC
Q 008787 510 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSVS 553 (553)
Q Consensus 510 ~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~~ 553 (553)
||+||.||+|++ .|+++.+.|||++|.+||.|.||+|||.|+.
T Consensus 413 ~i~GR~DDvI~v-sG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~ 455 (528)
T COG0365 413 WLHGRSDDVIKV-SGKRIGPLEIESVLLAHPAVAEAAVVGVPDP 455 (528)
T ss_pred EEEeeccceEec-cCeeccHHHHHHHHHhCcceeeeEEEeccCC
Confidence 999999999997 7999999999999999999999999999873
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-62 Score=526.15 Aligned_cols=462 Identities=18% Similarity=0.222 Sum_probs=354.0
Q ss_pred CCcccHHHHHHHHHHc--CCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHH
Q 008787 39 SDLNTAWDIFSMSVQK--YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVE 116 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~--~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~ 116 (553)
...+...++|+++++. +|+++|+++. ....+..+++||+||.+++.++|+.|+++|+++||+|+++++|++++++
T Consensus 56 ~~~n~~~~~l~~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~ 132 (647)
T PTZ00237 56 GELNTCYNVLDIHVKNPLKRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI 132 (647)
T ss_pred CeeeHHHHHHHHhhcccCCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH
Confidence 3457788899888865 7999999875 3222334789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchh---------hhhhhccccccccCccEEEEecCCc---h
Q 008787 117 AMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK---------VKELLSPDCRSAQRLRVMVCFTSLT---A 184 (553)
Q Consensus 117 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~---~ 184 (553)
++|||+++|++++|+++..+++++.+++++++++++|+++.. ...+.+...........++.+.... .
T Consensus 133 ~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 212 (647)
T PTZ00237 133 AMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSE 212 (647)
T ss_pred HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccc
Confidence 999999999999999999999999999999999999997521 1112111110101122344331110 0
Q ss_pred HHHHH--HhhCCceeeeHHHHHhccc----ccccccCCCCCCCeEEEEecCCCCCCCceEEeccHh-HHHHHhhchhhhc
Q 008787 185 EQKEM--AVQTGIKPYSWDEFLHLGK----VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHET-IATFVSGVDLFLD 257 (553)
Q Consensus 185 ~~~~~--~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~-l~~~~~~~~~~~~ 257 (553)
..... ..........|++++.... ..........++++++|+|||||||.||+|+++|.+ +..........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~- 291 (647)
T PTZ00237 213 SDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII- 291 (647)
T ss_pred cccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc-
Confidence 00000 0000012345666654321 111223345788999999999999999999999998 443332222222
Q ss_pred cccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCC-------hHHHHHHhhhhcCcEEeechHHHHHHHHHH
Q 008787 258 QFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGD-------LNALRDDLMELKPTLLAGVPRVFEKIHEGI 330 (553)
Q Consensus 258 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~-------~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~ 330 (553)
....++++++..|+.|..+...++.++..|+++++.+++ +..+++.++++++|++.++|++++.|.+..
T Consensus 292 ----~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 367 (647)
T PTZ00237 292 ----EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTD 367 (647)
T ss_pred ----CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhC
Confidence 456789999999999987666677789999999998752 678999999999999999999999886521
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCc
Q 008787 331 KKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAF 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 410 (553)
.... .....+++ ++||.+++||+++++++.+++++.+|++
T Consensus 368 ~~~~--------------------------------~~~~~~~l--------~~Lr~i~~~G~~l~~~~~~~~~~~~g~~ 407 (647)
T PTZ00237 368 PEAT--------------------------------IIRSKYDL--------SNLKEIWCGGEVIEESIPEYIENKLKIK 407 (647)
T ss_pred cccc--------------------------------ccccccCc--------chheEEEecCccCCHHHHHHHHHhcCCC
Confidence 1000 00011112 4899999999999999999999999999
Q ss_pred eEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC---CccccccCChhhhh
Q 008787 411 LVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTR 487 (553)
Q Consensus 411 i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~---~~~~gy~~~~~~~~ 487 (553)
+++.||+||+++..+..........+++|+|+||++++|+| +++. +++.|+.|||++++| +++.||+++++.+.
T Consensus 408 i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~--~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~ 484 (647)
T PTZ00237 408 SSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGK--ELNVNEIGEVAFKLPMPPSFATTFYKNDEKFK 484 (647)
T ss_pred EEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCC--CCCCCCceEEEEeccCCchhhCceeCCHHHHH
Confidence 99999999998765543332223347899999999999999 6554 345678999999986 78999999999998
Q ss_pred hhcc--CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 488 ESII--DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 488 ~~~~--~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+.|. +|||+|||+|++|+||+|+++||.||+|++ +|++|+|.|||++|.+||.|.+|+|+|+++
T Consensus 485 ~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~-~G~rI~p~eIE~~l~~~p~V~eaavvg~~~ 550 (647)
T PTZ00237 485 QLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKI-SGNKVQLNTIETSILKHPLVLECCSIGIYD 550 (647)
T ss_pred HHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEE-CCEEeCHHHHHHHHHhCCCceeeEEEeeEc
Confidence 8773 799999999999999999999999999997 799999999999999999999999999975
No 16
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4e-61 Score=508.85 Aligned_cols=436 Identities=22% Similarity=0.207 Sum_probs=348.5
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.+.|.+.++++|+++|+.+. .. +++||+||.++++++|+.|.+ .+||+|+++++|++++++++||
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA 86 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDE---QL-----GKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFA 86 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---CC-----CcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHH
Confidence 478999999999999999998753 22 379999999999999999987 3899999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++.++++.+++++++++.+....+.+...........++.+++.... ..+
T Consensus 87 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~ 154 (539)
T PRK06334 87 TLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LSF 154 (539)
T ss_pred HHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------ccH
Confidence 99999999999999999999999999999999998776554432211100001123333321100 000
Q ss_pred HHHHhc-----ccc----cccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEE
Q 008787 201 DEFLHL-----GKV----NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLS 271 (553)
Q Consensus 201 ~~l~~~-----~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (553)
.+.... ... .........++++++++|||||||.||+|.+||+++..........+ ++..+|++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~ 229 (539)
T PRK06334 155 WEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-----SPKEDDVMMS 229 (539)
T ss_pred HHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCCCceEEE
Confidence 010000 000 00112235678999999999999999999999999998876655544 6778899999
Q ss_pred ecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 008787 272 FLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDAL 348 (553)
Q Consensus 272 ~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (553)
.+|++|.+|+.. .+.++..|+++++... ++..+++.|+++++|++.++|.++..|++......
T Consensus 230 ~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-------------- 295 (539)
T PRK06334 230 FLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQE-------------- 295 (539)
T ss_pred ecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcc--------------
Confidence 999999999875 5668999999888753 89999999999999999999999999875322110
Q ss_pred HHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeec
Q 008787 349 YKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVC 427 (553)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~ 427 (553)
...++||.+++||+++++++.+++.+.+ ++.+++.||+||++.+++..
T Consensus 296 -------------------------------~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~ 344 (539)
T PRK06334 296 -------------------------------SCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITIN 344 (539)
T ss_pred -------------------------------cccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEec
Confidence 0114899999999999999999999988 68899999999998776655
Q ss_pred cCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc--cCCccccCceEEEcc
Q 008787 428 FPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI--IDGWFHTGDIGQILP 505 (553)
Q Consensus 428 ~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~--~~g~~~TGD~g~~~~ 505 (553)
.........++|+|+++++++++| ++++ .++++|+.|||+|+|++++.||+++++.+.... .+|||+|||+|++|+
T Consensus 345 ~~~~~~~~~~vG~p~~g~~v~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~ 422 (539)
T PRK06334 345 TVNSPKHESCVGMPIRGMDVLIVS-EETK-VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDR 422 (539)
T ss_pred cCCCCCCCCcCceecCCCEEEEEc-CCCC-ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECC
Confidence 443333346799999999999998 4333 566778999999999999999999998654332 367999999999999
Q ss_pred CCcEEEEecccCceecCCceeecchhHHHHHhcCcCcce------EEEEecCC
Q 008787 506 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIED------VSISYSSV 552 (553)
Q Consensus 506 dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~------~~V~g~~~ 552 (553)
||++++.||.+|+|++ +|++|+|.|||++|.+||+|.+ ++|+|.++
T Consensus 423 ~G~l~~~GR~~d~ik~-~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~ 474 (539)
T PRK06334 423 HGELFLKGRLSRFVKI-GAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPG 474 (539)
T ss_pred CCeEEEEeccCCeEEE-CCEEECHHHHHHHHHHccCCccccccCceEEEcCCC
Confidence 9999999999999997 8999999999999999999998 88888764
No 17
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=4e-61 Score=512.45 Aligned_cols=442 Identities=21% Similarity=0.195 Sum_probs=351.2
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
.-++.++|.+.++++|+++|+++. + +.+||.||.+++.++|.+|.++|+++||+|+++++|+++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la 76 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISG----N-----RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLA 76 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecC----C-----ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 368999999999999999999753 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++.++.+++.++++.+++++++++...............+....++..++........ ......+
T Consensus 77 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~ 152 (563)
T PLN02860 77 VACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIF----LNSFLTT 152 (563)
T ss_pred HhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccc----hhhcccc
Confidence 999999999999999999999999999999999987643222111111222233333333221000000 0001111
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
+++...............++++++++|||||||.||+|++||.++..........+ ++..+|+++...|++|.+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~g 227 (563)
T PLN02860 153 EMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-----GYGEDDVYLHTAPLCHIGG 227 (563)
T ss_pred chhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-----CCCCCCEEEEecCchhhcc
Confidence 22111110011111233578999999999999999999999999987766554444 6778899999999999999
Q ss_pred HHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhcc
Q 008787 281 RVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMG 359 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (553)
+...+.++..|+++++.+. ++..+++.++++++|++.++|.++..|++.......
T Consensus 228 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~------------------------ 283 (563)
T PLN02860 228 LSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMT------------------------ 283 (563)
T ss_pred HHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhc------------------------
Confidence 8877888999999888776 999999999999999999999999998753211100
Q ss_pred CCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCC-------
Q 008787 360 YKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE------- 431 (553)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~------- 431 (553)
....+++|.+++||+++++++.+.+++.| +.++++.||+||+++.++......
T Consensus 284 -------------------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~ 344 (563)
T PLN02860 284 -------------------WKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPK 344 (563)
T ss_pred -------------------cccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccch
Confidence 00114899999999999999999999988 789999999999886544321111
Q ss_pred ---------------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCcc
Q 008787 432 ---------------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWF 495 (553)
Q Consensus 432 ---------------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~ 495 (553)
.....++|+|+|++++++++ ++ +++.|||+|+|++++.||+++++.+.+.+ .+|||
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~-~~-------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~ 416 (563)
T PLN02860 345 QTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGL-DE-------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWL 416 (563)
T ss_pred hhhhhhcccccccccccCCcccCCccCCcEEEEec-CC-------CCceeEEEEecCcccccccCCccccchhccCCCeE
Confidence 11123689999999999998 43 45789999999999999999999998888 68999
Q ss_pred ccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 496 HTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 496 ~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|||+|++|+||++++.||.+|+|++ +|++++|.+||+++.+||+|.+|+|+|.++
T Consensus 417 ~TGDl~~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~ 472 (563)
T PLN02860 417 DTGDIGWIDKAGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVASVVVVGVPD 472 (563)
T ss_pred EccceEEEcCCCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcceeEEEEEec
Confidence 99999999999999999999999997 899999999999999999999999999865
No 18
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=6.2e-61 Score=518.00 Aligned_cols=456 Identities=16% Similarity=0.186 Sum_probs=354.0
Q ss_pred cccHHHHHHHHHH-cCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMSVQ-KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~a~-~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
.+...++|+++++ .+|+++|+++. ....+..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|
T Consensus 87 ~N~~~~~l~~~~~~~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~l 163 (666)
T PLN02654 87 TNICYNCLDRNVEAGNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAML 163 (666)
T ss_pred eeHHHHHHHHhhccCCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3555788888876 48999999875 3333445789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhh---------hcccccc---ccCccEEEEecCCchHHH
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL---------LSPDCRS---AQRLRVMVCFTSLTAEQK 187 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~ 187 (553)
||+++|++++|+++..+++++..++++++++++|+++...... ....... ......++..........
T Consensus 164 A~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
T PLN02654 164 ACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKR 243 (666)
T ss_pred HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccc
Confidence 9999999999999999999999999999999999987643211 0000000 011112222221110000
Q ss_pred HHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHH-hhchhhhccccCCCCCC
Q 008787 188 EMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFV-SGVDLFLDQFEDKMTVD 266 (553)
Q Consensus 188 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~-~~~~~~~~~~~~~~~~~ 266 (553)
............|+++.... ....+......+++++|+|||||||.||||+++|.+++... ......+ ++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-----~~~~~ 317 (666)
T PLN02654 244 EDTKWQEGRDVWWQDVVPNY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-----DYKPT 317 (666)
T ss_pred cccccccCCcccHHHHhhcC-CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-----CCCCC
Confidence 00000001123355554322 11122233577999999999999999999999999986433 3333333 67889
Q ss_pred cEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchH
Q 008787 267 DVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPL 340 (553)
Q Consensus 267 ~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~ 340 (553)
|++++..|+.|..|+.. ++.+++.|++++++++ ++..+++.|+++++|++.++|+++..|.+.....
T Consensus 318 d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------- 390 (666)
T PLN02654 318 DVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEY------- 390 (666)
T ss_pred cEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccc-------
Confidence 99999999999999765 5678999999999864 6899999999999999999999999886521100
Q ss_pred HHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC---CceEeeecc
Q 008787 341 RRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC---AFLVQGYGL 417 (553)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~---~~i~~~YG~ 417 (553)
...+++ ++||.++++|+++++++.+++.+.+| +++.+.||+
T Consensus 391 ----------------------------~~~~~l--------~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~ 434 (666)
T PLN02654 391 ----------------------------VTRHSR--------KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 434 (666)
T ss_pred ----------------------------cccCCh--------hheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccc
Confidence 011112 38999999999999999999999887 689999999
Q ss_pred ccCCCceeeccCCC-ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec--CCccccccCChhhhhhhc---c
Q 008787 418 TETCGPTTVCFPDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESI---I 491 (553)
Q Consensus 418 tE~g~~~~~~~~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~---~ 491 (553)
||+|+......+.. ...++++|+|+||++++|+| +++.. ++.++.|||+|++ |.++.||+++++.+.+.+ .
T Consensus 435 TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~--~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~ 511 (666)
T PLN02654 435 TETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKE--IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPF 511 (666)
T ss_pred cccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCC--CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcC
Confidence 99987665443322 34558999999999999999 65543 4456789999999 789999999999888765 3
Q ss_pred CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 492 DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 492 ~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|||+|||+|++|+||+++++||.+|+|++ +|++|+|.|||++|.+||+|.+|+|+|.++
T Consensus 512 ~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d 571 (666)
T PLN02654 512 AGYYFSGDGCSRDKDGYYWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGIEH 571 (666)
T ss_pred CCEEEeCceEEECCCCcEEEeeeccCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEeeEc
Confidence 899999999999999999999999999997 799999999999999999999999999876
No 19
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.7e-60 Score=512.82 Aligned_cols=456 Identities=23% Similarity=0.285 Sum_probs=361.1
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.++++++|+++|+++... ++..+..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++||
T Consensus 24 ~~t~~~~l~~~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA 102 (632)
T PRK07529 24 PASTYELLSRAAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWG 102 (632)
T ss_pred CCCHHHHHHHHHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 36899999999999999999987411 11122347899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh-----hhhhccccccccCccEEEEecCCchH--HHHHHh--
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAE--QKEMAV-- 191 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 191 (553)
|+++| +++|+++.++++++.++++.++++++|++.... ..+.... ...+....++.++..... ......
T Consensus 103 ~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 180 (632)
T PRK07529 103 GEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVL-AALPELRTVVEVDLARYLPGPKRLAVPL 180 (632)
T ss_pred HHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHH-hcCCcceeEEEecCcccccccccccccc
Confidence 99999 568999999999999999999999999975432 1221111 122344555555432100 000000
Q ss_pred ---hCCceeeeHHHHHhcccccc-cccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCc
Q 008787 192 ---QTGIKPYSWDEFLHLGKVNE-MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDD 267 (553)
Q Consensus 192 ---~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (553)
....+...|.+.+....... .......++++++++|||||||.||+|.+||.+++..+......+ .+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-----~~~~~d 255 (632)
T PRK07529 181 IRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-----GLGPGD 255 (632)
T ss_pred cccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-----CCCCCC
Confidence 01123445665554432221 112234678999999999999999999999999998877665555 567899
Q ss_pred EEEEecChHHHHHHHH-HHHHHHcCcEEEEecC----C---hHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhch
Q 008787 268 VYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG----D---LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRP 339 (553)
Q Consensus 268 ~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~----~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~ 339 (553)
++++.+|++|.+++.. ++.++..|+++++.+. + ...+++.++++++|++.++|+++..|++...
T Consensus 256 ~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-------- 327 (632)
T PRK07529 256 TVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-------- 327 (632)
T ss_pred EEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc--------
Confidence 9999999999999875 6678999999998753 2 3678899999999999999999998864210
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeecccc
Q 008787 340 LRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTE 419 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE 419 (553)
+..++ +++|.+++||+++++++.+.+++.+|+++++.||+||
T Consensus 328 ------------------------------~~~~~--------~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE 369 (632)
T PRK07529 328 ------------------------------DGHDI--------SSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTE 369 (632)
T ss_pred ------------------------------cCCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccc
Confidence 00011 4899999999999999999999999999999999999
Q ss_pred CCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCC--CCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccc
Q 008787 420 TCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGY--SPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFH 496 (553)
Q Consensus 420 ~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~--~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~ 496 (553)
++.++..+........+++|.|+|+.+++++..++++. .+++.|+.|||+|+||+++.||++++. +...| .+|||+
T Consensus 370 ~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~ 448 (632)
T PRK07529 370 ATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLN 448 (632)
T ss_pred cCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCcc-ccccccCCCceE
Confidence 98877666544444568999999999999976344332 566778999999999999999998654 44555 789999
Q ss_pred cCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 497 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 497 TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|||+|++|+||++++.||.+|+|++ +|++|+|.+||++|.+||+|.+|+|+|.++
T Consensus 449 TGDlg~~d~dG~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d 503 (632)
T PRK07529 449 TGDLGRIDADGYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVALAAAVGRPD 503 (632)
T ss_pred cCcEEEEcCCceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeccC
Confidence 9999999999999999999999996 899999999999999999999999999875
No 20
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.4e-60 Score=509.55 Aligned_cols=439 Identities=22% Similarity=0.289 Sum_probs=347.5
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.+.|.++++++|+++|+++. + ..+.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~---~-~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 113 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAER---G-ADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALA 113 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeec---c-CCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHH
Confidence 578999999999999999999864 2 234467899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCC-----hhHHHHHHhhcCceEEEEcchh-hhhhhccccccccCccEEEEecCCchHHHHHHhhCC
Q 008787 121 CNALSLICVPLYDTLG-----PGAVNFILDHAEIDFVFVQDKK-VKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTG 194 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (553)
|+++|++++|+++.++ .+++.++++.++++++|++... .......... .. ..++....... .
T Consensus 114 ~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~---------~ 181 (614)
T PRK08180 114 AMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--AD-VEVVAVRGAVP---------G 181 (614)
T ss_pred HHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CC-ceEEEecCCCC---------C
Confidence 9999999999999988 7899999999999999998642 1111111111 11 12222222100 0
Q ss_pred ceeeeHHHHHhcccccc--cccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCC--CCcEEE
Q 008787 195 IKPYSWDEFLHLGKVNE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT--VDDVYL 270 (553)
Q Consensus 195 ~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~--~~~~~~ 270 (553)
....+|.++........ .......++++++|+|||||||.||+|++||+++...+......+ ... .+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~~l 256 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF-----PFLAEEPPVLV 256 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc-----cccCCCCcEEE
Confidence 01245666554321111 111234678999999999999999999999999998877655444 332 568999
Q ss_pred EecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHH
Q 008787 271 SFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRI 344 (553)
Q Consensus 271 ~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 344 (553)
+++|++|.+|+.. ++.+++.|+++++.++ ++..+++.++++++|+++++|.++..|++.+.....
T Consensus 257 ~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~--------- 327 (614)
T PRK08180 257 DWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAA--------- 327 (614)
T ss_pred EecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchh---------
Confidence 9999999999865 5568999999988763 345788999999999999999999998764322110
Q ss_pred HHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHh----cC--CceEeeeccc
Q 008787 345 FDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT----CC--AFLVQGYGLT 418 (553)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~----~~--~~i~~~YG~t 418 (553)
..+..++++|.+++||+++++++.+.+++. +| +++++.||+|
T Consensus 328 --------------------------------~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~T 375 (614)
T PRK08180 328 --------------------------------LRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMT 375 (614)
T ss_pred --------------------------------hhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeeccc
Confidence 011122589999999999999999998874 33 6799999999
Q ss_pred cCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCcccc
Q 008787 419 ETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHT 497 (553)
Q Consensus 419 E~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~T 497 (553)
|++.+++...... ..++++|+|+||+++++++ + +..|||+|+|++++.||+++|+.+.+.| .||||+|
T Consensus 376 E~~~~~~~~~~~~-~~~~svG~p~pg~~v~i~d-~---------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~T 444 (614)
T PRK08180 376 ETAPSATFTTGPL-SRAGNIGLPAPGCEVKLVP-V---------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRS 444 (614)
T ss_pred ccCCceEeccccc-CCCCcccCccCCcEEEEec-C---------CCCcEEEEecCccchhhcCChhHhHhhcccCCceec
Confidence 9987766543332 3458999999999999998 3 2469999999999999999999999988 6899999
Q ss_pred CceEEE----ccCCcEEEEecccCceecCCceeec--chhHHHHHhcCcCcceEEEEecCC
Q 008787 498 GDIGQI----LPNGVVKIIDRKKNLIKISQGEYVA--LEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 498 GD~g~~----~~dG~l~~~GR~~d~i~~~~G~~~~--~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+|++ |+||+|+|+||.+|+|++++|++++ |.|+|.++.+||.|.+|+|+|.++
T Consensus 445 GDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~ 505 (614)
T PRK08180 445 GDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDR 505 (614)
T ss_pred cceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCC
Confidence 999999 4689999999999999877899777 778889999999999999999875
No 21
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.6e-60 Score=511.79 Aligned_cols=455 Identities=17% Similarity=0.167 Sum_probs=355.5
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..+...++|.++++.+|+++|+++. +..++..+++||+||.+++.++|++|+++|+++||+|+++++|++++++++|
T Consensus 50 ~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~l 126 (628)
T TIGR02316 50 RTNLCHNALDRHLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAML 126 (628)
T ss_pred EeeHHHHHHHHHhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3566678898899899999999875 4334455789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh---------hhhhccccccccCccEEEEecCCchHHHHHH
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMA 190 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (553)
||+++|++++|+++.++.+++.+++++++++++|+++... ..+..+..........++.++......
T Consensus 127 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~---- 202 (628)
T TIGR02316 127 ACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM---- 202 (628)
T ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----
Confidence 9999999999999999999999999999999999976421 111111111112234455554321100
Q ss_pred hhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHH-HhhchhhhccccCCCCCCcEE
Q 008787 191 VQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATF-VSGVDLFLDQFEDKMTVDDVY 269 (553)
Q Consensus 191 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 269 (553)
.........|.++.........+.....++++++|+|||||||.||||+++|.+++.. .......+ ++..+|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~ 277 (628)
T TIGR02316 203 RLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-----GIRAGQVM 277 (628)
T ss_pred CcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCcEE
Confidence 0000112456665544322222223346789999999999999999999999997643 33333333 67788999
Q ss_pred EEecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHH
Q 008787 270 LSFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRR 343 (553)
Q Consensus 270 ~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~ 343 (553)
++..|+.|..|+.. .+.++..|+++++.++ ++..+++.++++++|+++++|++++.|.+....
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~----------- 346 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA----------- 346 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc-----------
Confidence 99999999998754 6678999999999764 688999999999999999999999887542100
Q ss_pred HHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCc
Q 008787 344 IFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGP 423 (553)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~ 423 (553)
.....++ ++||.+++||+++++++.+++++.++..+++.||+||++..
T Consensus 347 ------------------------~~~~~~l--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~ 394 (628)
T TIGR02316 347 ------------------------WLRKHDL--------SSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWP 394 (628)
T ss_pred ------------------------ccccCCc--------cceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCce
Confidence 0011111 48999999999999999999999899999999999999864
Q ss_pred eeeccCC---CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC---CccccccCChhhhhhhc----cCC
Q 008787 424 TTVCFPD---EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESI----IDG 493 (553)
Q Consensus 424 ~~~~~~~---~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~---~~~~gy~~~~~~~~~~~----~~g 493 (553)
.+..... .....+++|+|+||++++|+| ++++ .+++.|+.|||+++|| ..+.+|+++++.+.+.+ .++
T Consensus 395 ~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g-~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~ 472 (628)
T TIGR02316 395 VLAIMPGLDLKPVKLGSPGLPMYGYHLRVLD-EATG-RPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRP 472 (628)
T ss_pred eecCCCCCCcCCCCCCCcccCcCCceEEEEE-CCCC-CCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCC
Confidence 4433221 123347889999999999999 5322 4455678999999998 46789999988776654 467
Q ss_pred ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 494 WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 494 ~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+|||+|++|+||+++++||.||+|++ +|++|+|.|||++|.+||+|.||+|+|+++
T Consensus 473 ~~~TGD~g~~d~dG~l~i~GR~dd~ik~-~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d 530 (628)
T TIGR02316 473 LYSSFDWGIRDEDGYTFILGRTDDVINV-AGHRLGTREIEESVSSHPSVAEVAVVGVHD 530 (628)
T ss_pred EEECCceEEEcCCCcEEEEEcCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeeec
Confidence 9999999999999999999999999997 899999999999999999999999999875
No 22
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.8e-60 Score=511.26 Aligned_cols=453 Identities=18% Similarity=0.235 Sum_probs=359.3
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..+...++|+++++++|+++|+++. +...+..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|
T Consensus 55 ~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 131 (625)
T TIGR02188 55 ELNVSYNCVDRHLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAML 131 (625)
T ss_pred EEEHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3467788888899999999999986 3324456799999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh---------hhhcccccccc-CccEEEEecCCchHHHHH
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK---------ELLSPDCRSAQ-RLRVMVCFTSLTAEQKEM 189 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 189 (553)
||+++|++++|+++..+.+++.++++.++++++|+++.... .+.+... ..+ .+..++.+........
T Consensus 132 A~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 208 (625)
T TIGR02188 132 ACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALE-KCPVSVEHVLVVRRTGNPVP-- 208 (625)
T ss_pred HHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHH-hCCCCccEEEEEcCCCCCcC--
Confidence 99999999999999999999999999999999999875321 1111111 112 3444554433211000
Q ss_pred HhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhh-chhhhccccCCCCCCcE
Q 008787 190 AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKMTVDDV 268 (553)
Q Consensus 190 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~-~~~~~~~~~~~~~~~~~ 268 (553)
........|++++.... .........++++++|+|||||||.||+|+++|.+++..... ....+ ++..+|+
T Consensus 209 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~ 280 (625)
T TIGR02188 209 --WVEGRDVWWHDLMAKAS-AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF-----DIKDGDI 280 (625)
T ss_pred --ccccccccHHHHHhhcC-CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc-----CCCCCcE
Confidence 00011234556554421 222333457789999999999999999999999998755433 22222 6778899
Q ss_pred EEEecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHH
Q 008787 269 YLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRR 342 (553)
Q Consensus 269 ~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~ 342 (553)
+++..|++|..+... ++.++..|+++++.++ ++..+++.++++++|++.++|++++.|.+.....
T Consensus 281 ~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~--------- 351 (625)
T TIGR02188 281 FWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEW--------- 351 (625)
T ss_pred EEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcc---------
Confidence 999999999988764 6668999999998763 6899999999999999999999999886531110
Q ss_pred HHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC---CceEeeecccc
Q 008787 343 RIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC---AFLVQGYGLTE 419 (553)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~---~~i~~~YG~tE 419 (553)
.+..++ ++||.+++||+++++++.+++.+.++ +++++.||+||
T Consensus 352 --------------------------~~~~~l--------~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE 397 (625)
T TIGR02188 352 --------------------------VKKHDL--------SSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTE 397 (625)
T ss_pred --------------------------cccCCc--------cceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccc
Confidence 011111 48999999999999999999998885 78999999999
Q ss_pred CCCceeeccCC-CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec--CCccccccCChhhhhhhc---cCC
Q 008787 420 TCGPTTVCFPD-EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESI---IDG 493 (553)
Q Consensus 420 ~g~~~~~~~~~-~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~---~~g 493 (553)
+|+.++..... ....++++|+|++|++++++| +++...+ +.|+.|||+|+| |+++.||+++++.+.+.+ .+|
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~-~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g 475 (625)
T TIGR02188 398 TGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVE-GPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPG 475 (625)
T ss_pred cCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCC-CCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCC
Confidence 98876654332 233458899999999999999 6554332 267899999999 689999999998887765 478
Q ss_pred ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 494 WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 494 ~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+|||+|++|+||+++++||.+|+|++ +|++++|.+||++|.+||.|.||+|+|.++
T Consensus 476 ~~~TGDl~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~ 533 (625)
T TIGR02188 476 YYFTGDGARRDKDGYIWITGRVDDVINV-SGHRLGTAEIESALVSHPAVAEAAVVGIPD 533 (625)
T ss_pred EEECCceEEEcCCCcEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEc
Confidence 9999999999999999999999999997 799999999999999999999999999865
No 23
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.4e-60 Score=507.49 Aligned_cols=465 Identities=23% Similarity=0.272 Sum_probs=355.4
Q ss_pred CCCCCCCCcceeccc----cCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHH
Q 008787 15 KDGKPSVGPVYRNLL----ASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIV 90 (553)
Q Consensus 15 ~~~~~~~~~~~r~~~----~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la 90 (553)
-.-+|...+.+|... .-.+++.. ....++.++|+++++++|+++|+++. +...+.++.+||+||.++++++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA 94 (624)
T PRK12582 19 LNWKPPDISVERRADGSIVIKSRHPLG-PYPRSIPHLLAKWAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALA 94 (624)
T ss_pred cccCCCceEEEEcCCceEEEecCCCCC-CcccCHHHHHHHHHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHH
Confidence 344566666676642 22233322 34578999999999999999999865 32245568999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCCh-----hHHHHHHhhcCceEEEEcchh-hhhhhc
Q 008787 91 SALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGP-----GAVNFILDHAEIDFVFVQDKK-VKELLS 164 (553)
Q Consensus 91 ~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~i~~~~~~-~~~~~~ 164 (553)
++|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++. +++.++++.++++++|++... ......
T Consensus 95 ~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 174 (624)
T PRK12582 95 QALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALA 174 (624)
T ss_pred HHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999875 899999999999999998642 111112
Q ss_pred cccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccc--cccCCCCCCCeEEEEecCCCCCCCceEEecc
Q 008787 165 PDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTH 242 (553)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th 242 (553)
.... ... .++.++.... ......+.++........ .......++++++|+|||||||.||+|++||
T Consensus 175 ~~~~--~~~-~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th 242 (624)
T PRK12582 175 ALDL--LDV-TVVHVTGPGE---------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQ 242 (624)
T ss_pred hhhh--cCc-eEEEEcCCCc---------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeH
Confidence 1111 112 2333332110 011234555544321110 1112346789999999999999999999999
Q ss_pred HhHHHHHhhchhhhccccCCCC---CCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcC
Q 008787 243 ETIATFVSGVDLFLDQFEDKMT---VDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKP 313 (553)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~ 313 (553)
+++........... ... ..+++++++|++|.+|+.. ++.++..|+++++.+. ....+++.++++++
T Consensus 243 ~~l~~~~~~~~~~~-----~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~ 317 (624)
T PRK12582 243 RMMCANIAMQEQLR-----PREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISP 317 (624)
T ss_pred HHHHHHHHHHHHhc-----cccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCC
Confidence 99988766543332 222 2579999999999999876 4457888999988753 23456788899999
Q ss_pred cEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCC
Q 008787 314 TLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGA 393 (553)
Q Consensus 314 t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~ 393 (553)
|+++++|.++..|.+.+.... .....++ ++||.+++||+
T Consensus 318 t~~~~vP~~~~~l~~~~~~~~---------------------------------~~~~~~~--------~slr~i~~gGa 356 (624)
T PRK12582 318 TVYGNVPAGYAMLAEAMEKDD---------------------------------ALRRSFF--------KNLRLMAYGGA 356 (624)
T ss_pred eEEeccCHHHHHHHHHHhhCH---------------------------------HHHHHHh--------hheeEEEecCC
Confidence 999999999998865432211 0111112 38999999999
Q ss_pred CCCHHHHHHHHHhc------CCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCe
Q 008787 394 PLSTEVEEFLRVTC------CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGE 467 (553)
Q Consensus 394 ~l~~~~~~~~~~~~------~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Ge 467 (553)
++++++.+++++.+ ++++++.||+||++.++...... ....+++|+|+||+++++++ .|+.||
T Consensus 357 ~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-~~~~~svG~p~pg~~v~i~~----------~G~~GE 425 (624)
T PRK12582 357 TLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-TERVGLIGLPLPGVELKLAP----------VGDKYE 425 (624)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-CCCCCCCCcCCCCcEEEEcc----------CCCceE
Confidence 99999999998863 36799999999998766533222 23457999999999999976 457899
Q ss_pred EEEecCCccccccCChhhhhhhc-cCCccccCceEEE-c---cCCcEEEEecccCceecCCceeecchhHH--HHHhcCc
Q 008787 468 VCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQI-L---PNGVVKIIDRKKNLIKISQGEYVALEYLE--NVYCVAP 540 (553)
Q Consensus 468 i~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~-~---~dG~l~~~GR~~d~i~~~~G~~~~~~~iE--~~l~~~p 540 (553)
|+|+|++++.||+++|+.+.+.| .||||+|||+|++ | +||+|+++||.+|+|++++|++|+|.+|| .++.+||
T Consensus 426 l~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p 505 (624)
T PRK12582 426 VRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSP 505 (624)
T ss_pred EEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCc
Confidence 99999999999999999999988 6899999999998 4 46999999999999998789999998885 6778999
Q ss_pred CcceEEEEecCC
Q 008787 541 IIEDVSISYSSV 552 (553)
Q Consensus 541 ~V~~~~V~g~~~ 552 (553)
.|.+|+|+|+++
T Consensus 506 ~V~~a~VvG~~~ 517 (624)
T PRK12582 506 VIHDAVVAGQDR 517 (624)
T ss_pred chheEEEEcCCC
Confidence 999999999875
No 24
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.5e-62 Score=451.08 Aligned_cols=436 Identities=20% Similarity=0.221 Sum_probs=375.7
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|..+|+++||++|+++. + +.+||+||.++++++|..|++.||++||+|.+.+||..+|++++||
T Consensus 27 d~~l~d~L~~~A~~~pdriAv~d~----~-----~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FA 97 (542)
T COG1021 27 DRTLTDILTDHAARYPDRIAVIDG----E-----RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFA 97 (542)
T ss_pred CCcHHHHHHHHHhhcCCceEEecC----c-----ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHH
Confidence 588999999999999999999853 2 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchh----hhhhhccccccccCccEEEEecCCchHHHHHHhhCCce
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK----VKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIK 196 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (553)
++++|..+|+.-|.....||.++.....++.+|+++.. ...+.+....+.+.++.+++.++....
T Consensus 98 LlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~----------- 166 (542)
T COG1021 98 LLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP----------- 166 (542)
T ss_pred HHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc-----------
Confidence 99999999999899899999999999999999887653 122333333455778888888655321
Q ss_pred eeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH
Q 008787 197 PYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
...+..+.... ....+..+.++++++++..+.||||.||.|..||..+..++....+.+ ++...+++++.+|..
T Consensus 167 ~~~~~~~~~~a-~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-----~~~~~tvyL~~LP~A 240 (542)
T COG1021 167 SVLEAALCHPA-GLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-----GFDQQTVYLCALPAA 240 (542)
T ss_pred chhhhhhhCcc-ccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-----CcCccceEEEecccc
Confidence 11222232222 334456677888999999999999999999999999999999888888 899999999999999
Q ss_pred HHHHHHH--HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 008787 277 HILDRVI--EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 353 (553)
Q Consensus 277 ~~~g~~~--~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
|.+.++. .+..++.|+++|+.+. +++.-+.+|+++++|+...+|.+...+++.....
T Consensus 241 HNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~-------------------- 300 (542)
T COG1021 241 HNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWE-------------------- 300 (542)
T ss_pred cCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcc--------------------
Confidence 9999985 6678999999999876 9999999999999999999999999888754432
Q ss_pred HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-c
Q 008787 354 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-M 432 (553)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~-~ 432 (553)
+.++ +|||.+-+||+.+++++.+++...+|+.+.+.|||.| |.+.+++.++. .
T Consensus 301 -----------------~~~L--------sSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAE-GLvnyTRLDDp~E 354 (542)
T COG1021 301 -----------------RADL--------SSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAE-GLVNYTRLDDPPE 354 (542)
T ss_pred -----------------cCCc--------hheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhh-hhhcccccCCchH
Confidence 2223 3999999999999999999999999999999999999 56666665544 3
Q ss_pred cccCccCCCC-CCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEE
Q 008787 433 CMVGTAGPVS-VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVK 510 (553)
Q Consensus 433 ~~~~~~G~~~-~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~ 510 (553)
....+-|+|+ |.-+++|+| .++ .++++||.|++.++||..++|||+.|+.++++| .+|||+|||+.++|+||+|.
T Consensus 355 ~i~~TQGrPlsP~DEvrvvD-~dg--~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~ 431 (542)
T COG1021 355 IIIHTQGRPLSPDDEVRVVD-ADG--NPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLV 431 (542)
T ss_pred heeecCCCcCCCcceeEEec-CCC--CCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEE
Confidence 4446778887 788999999 555 466778999999999999999999999999999 89999999999999999999
Q ss_pred EEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 511 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 511 ~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+.||.+|.|+ ++|+||..+|||+.|.+||.|.+|++|+.++
T Consensus 432 V~GR~KDQIN-RgGEKIAAeEvEn~LL~HP~V~~AAlVampD 472 (542)
T COG1021 432 VEGRVKDQIN-RGGEKIAAEEVENLLLRHPAVHDAALVAMPD 472 (542)
T ss_pred EEeeehhhhc-cccchhhHHHHHHHHhhCchhhhhhhhcCch
Confidence 9999999999 7999999999999999999999999999886
No 25
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-60 Score=503.17 Aligned_cols=436 Identities=20% Similarity=0.200 Sum_probs=357.8
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.++.++|.++++++|+++|+++. + +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~ 119 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAA 119 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHH
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 201 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (553)
+++|++++|+++.++.+++.++++.++++++|++......+... ......+..+........ ....+..+++
T Consensus 120 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 191 (549)
T PRK07788 120 GKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSAL-PPDLGRLRAWGGNPDDDE-------PSGSTDETLD 191 (549)
T ss_pred HhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhh-ccccccceEEEEecCccc-------cCCcCcccHH
Confidence 99999999999999999999999999999999998766554332 112222222222211110 0112345677
Q ss_pred HHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHH
Q 008787 202 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 281 (553)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 281 (553)
++...... ...+...++.++++|||||||.||+|.++|+++...+......+ .+..++++++..|++|.+|+
T Consensus 192 ~~~~~~~~---~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~ 263 (549)
T PRK07788 192 DLIAGSST---APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-----PFRAGETTLLPAPMFHATGW 263 (549)
T ss_pred HHhcCCCC---CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-----CCCcCCeEEEccchHHHHHH
Confidence 76654322 11223456789999999999999999999999998877665554 67788999999999999999
Q ss_pred HHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccC
Q 008787 282 VIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGY 360 (553)
Q Consensus 282 ~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (553)
...+.++..|+++++... ++..+++.++++++|++.++|+++..+++.......
T Consensus 264 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~------------------------- 318 (549)
T PRK07788 264 AHLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLA------------------------- 318 (549)
T ss_pred HHHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccC-------------------------
Confidence 877778999999988765 999999999999999999999999988653221000
Q ss_pred CcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCC
Q 008787 361 KQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGP 440 (553)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~ 440 (553)
.. ..+++|.+++||+++++++.+++.+.++..+++.||+||++..+.....+.....+++|+
T Consensus 319 ----------~~--------~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~ 380 (549)
T PRK07788 319 ----------KY--------DTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGR 380 (549)
T ss_pred ----------CC--------CCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCccc
Confidence 00 014899999999999999999999999999999999999987655443332334578999
Q ss_pred CCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCcee
Q 008787 441 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIK 520 (553)
Q Consensus 441 ~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~ 520 (553)
|+++++++++| +++. +++.|+.|||+|+|+.++.||++++.. ...+|||+|||+|++|+||++++.||.+|+|+
T Consensus 381 ~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~g~~~~~gY~~~~~~---~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~ 454 (549)
T PRK07788 381 PPKGVTVKILD-ENGN--EVPRGVVGRIFVGNGFPFEGYTDGRDK---QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIV 454 (549)
T ss_pred CCCCcEEEEEC-CCcC--CCCCCCeEEEEEeCCCccccccCCCcc---cccCCceecCceEEEcCCCCEEEeccCcceEE
Confidence 99999999999 5554 445579999999999999999988765 23589999999999999999999999999999
Q ss_pred cCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 521 ISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 521 ~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+ +|++|+|.+||++|.+||+|.+|+|+|.++
T Consensus 455 ~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~ 485 (549)
T PRK07788 455 S-GGENVFPAEVEDLLAGHPDVVEAAVIGVDD 485 (549)
T ss_pred E-CCEEECHHHHHHHHHhCCCeeEEEEECCcC
Confidence 6 899999999999999999999999999765
No 26
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.9e-59 Score=498.28 Aligned_cols=440 Identities=24% Similarity=0.281 Sum_probs=360.5
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.+.|+++++.+|+++|+++. +...++++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 367999999999999999999875 43344557999999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh-----hhhhccccccccCccEEEEecCCchHHHHHHhhCCc
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGI 195 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (553)
|+++|++++|+++..+.+++.++++.++++++++++... +.+.+ .....+....++.++...
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------ 166 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARR-LRPELPALRHVVVVGGDG------------ 166 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHH-HhhhCCCcceEEEecCCC------------
Confidence 999999999999999999999999999999999987531 11111 111223344455443321
Q ss_pred eeeeHHHHHhccc-------ccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcE
Q 008787 196 KPYSWDEFLHLGK-------VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDV 268 (553)
Q Consensus 196 ~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~ 268 (553)
..++.++..... ..........++++++++|||||||.||+|+++|.++...+......+ ++..+++
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~ 240 (547)
T PRK13295 167 -ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-----GLGADDV 240 (547)
T ss_pred -ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-----CCCCCCe
Confidence 113333332110 011112234678999999999999999999999999988877765555 6788999
Q ss_pred EEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 269 YLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 269 ~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
+++..|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..|........
T Consensus 241 ~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~------------ 308 (547)
T PRK13295 241 ILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESG------------ 308 (547)
T ss_pred EEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccC------------
Confidence 999999999998765 6678999999988876 89999999999999999999999988864321100
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceee
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTV 426 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~ 426 (553)
. ..+++|.+++||+++++++.+++.+.++.++++.||+||++.+++.
T Consensus 309 -------------------------~--------~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~ 355 (547)
T PRK13295 309 -------------------------R--------PVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLT 355 (547)
T ss_pred -------------------------C--------CcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeec
Confidence 0 1148999999999999999999999889999999999999887665
Q ss_pred ccCCC-ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEcc
Q 008787 427 CFPDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILP 505 (553)
Q Consensus 427 ~~~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~ 505 (553)
+.... .....++|+|+++++++++| +++ .+++.|+.|||+|+|++++.||+++++.+... .+|||+|||+|++++
T Consensus 356 ~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~ 431 (547)
T PRK13295 356 KLDDPDERASTTDGCPLPGVEVRVVD-ADG--APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDA 431 (547)
T ss_pred cCCCcchhccCccccccCCcEEEEEC-CCC--CCCCCCCCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcC
Confidence 54322 22346789999999999999 554 35566799999999999999999999888765 688999999999999
Q ss_pred CCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 506 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 506 dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||++++.||.+|+|++ +|++++|.+||++|.+||+|.+++|+|.++
T Consensus 432 ~g~l~~~gR~~~~i~~-~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~ 477 (547)
T PRK13295 432 DGYIRISGRSKDVIIR-GGENIPVVEIEALLYRHPAIAQVAIVAYPD 477 (547)
T ss_pred CceEEEEeccCCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeec
Confidence 9999999999999996 899999999999999999999999999764
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-59 Score=501.46 Aligned_cols=444 Identities=19% Similarity=0.221 Sum_probs=365.8
Q ss_pred CcccHHHHHHHHHH-cCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 40 DLNTAWDIFSMSVQ-KYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 40 ~~~~l~~~l~~~a~-~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
.++.+.+++.+++. .+|+++|+++. +.. ..+.+||+||.+++.++|.+|.++|+++||+|+++++|++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 115 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFAL 115 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 35666788888887 57999999876 432 3368999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
|||+++|++++|+++..+++++.++++.+++++++++......... ...+....++.+++... ......
T Consensus 116 la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~ 184 (570)
T PRK04319 116 LGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA---DDLPSLKHVLLVGEDVE--------EGPGTL 184 (570)
T ss_pred HHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch---hcCCCceEEEEECCCcC--------CCcCcc
Confidence 9999999999999999999999999999999999998876543321 12234445555543211 011234
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
++.+++..... .....+..++++++++|||||||.||+|+++|++++..+......+ ++..+|++++..|++|.
T Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~ 258 (570)
T PRK04319 185 DFNALMEQASD-EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-----DLHEDDVYWCTADPGWV 258 (570)
T ss_pred CHHHHHhhcCC-cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-----CCCCCceEEecCChHHh
Confidence 56666544322 2233345678999999999999999999999999988777665555 67788999999999999
Q ss_pred HHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 008787 279 LDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 355 (553)
Q Consensus 279 ~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (553)
+|+.. .+.++..|+++++... ++..+++.++++++|+++++|.+++.|.+.....
T Consensus 259 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---------------------- 316 (570)
T PRK04319 259 TGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDL---------------------- 316 (570)
T ss_pred hCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcc----------------------
Confidence 88765 6678999999988764 8999999999999999999999999886421100
Q ss_pred HhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCcccc
Q 008787 356 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMV 435 (553)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~ 435 (553)
....++ +++|.+++||+++++++.+++++.++.++++.||+||++..+...........
T Consensus 317 -------------~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~ 375 (570)
T PRK04319 317 -------------VKKYDL--------SSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKP 375 (570)
T ss_pred -------------cccCCc--------ccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCC
Confidence 000111 38999999999999999999999999999999999999876655443333445
Q ss_pred CccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec--CCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEe
Q 008787 436 GTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIID 513 (553)
Q Consensus 436 ~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~G 513 (553)
+++|+|+|++++++++ +++... +.|+.|||+++| +.++.||+++++.+.+.|.+|||+|||+|++++||+++++|
T Consensus 376 ~~~G~p~~g~~~~i~d-~~~~~~--~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~G 452 (570)
T PRK04319 376 GSMGKPLPGIEAAIVD-DQGNEL--PPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQG 452 (570)
T ss_pred CcCcCCCCCCEEEEEC-CCCCCC--CCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEe
Confidence 7899999999999999 655433 567999999997 89999999999999999999999999999999999999999
Q ss_pred cccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 514 RKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 514 R~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|.+|+|+. +|++|+|.+||++|.+||.|.+++|+|.++
T Consensus 453 R~~d~i~~-~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~ 490 (570)
T PRK04319 453 RVDDVIKT-SGERVGPFEVESKLMEHPAVAEAGVIGKPD 490 (570)
T ss_pred cCCCEEEE-CCEEECHHHHHHHHhhCCCeeecceecccC
Confidence 99999997 899999999999999999999999999875
No 28
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-59 Score=504.20 Aligned_cols=450 Identities=18% Similarity=0.251 Sum_probs=355.8
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
+...++|.++++++|+++|+++. +...+..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 67 n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 143 (637)
T PRK00174 67 NVSYNCLDRHLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLAC 143 (637)
T ss_pred EHHHHHHHHhhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 44567888889999999999975 332234578999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh---------hhhccccccccCccEEEEecCCchHHHHHHhh
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK---------ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQ 192 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (553)
+++|++++|+++..+.+++.++++.++++++|+++.... .+.+.. ...+....++.+....... ..
T Consensus 144 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~ 218 (637)
T PRK00174 144 ARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEAL-ANCPSVEKVIVVRRTGGDV----DW 218 (637)
T ss_pred HHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHH-HhCCCccEEEEEcCCCCCc----Cc
Confidence 999999999999999999999999999999999765321 111111 1123344455443321100 00
Q ss_pred CCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhh-chhhhccccCCCCCCcEEEE
Q 008787 193 TGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKMTVDDVYLS 271 (553)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 271 (553)
.......|+++.... ....+......+++++|+|||||||.||+|+++|.+++..... ....+ ++..+|++++
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~ 292 (637)
T PRK00174 219 VEGRDLWWHELVAGA-SDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF-----DYKDGDVYWC 292 (637)
T ss_pred CCCCcccHHHHHhhc-CCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-----CCCCCcEEEE
Confidence 011223455655432 2222233456789999999999999999999999998755432 22222 6677899999
Q ss_pred ecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHH
Q 008787 272 FLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIF 345 (553)
Q Consensus 272 ~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (553)
..|++|..++.. .+.++..|+++++.++ ++..+++.|+++++|++.++|++++.|.+.....
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------------ 360 (637)
T PRK00174 293 TADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEH------------ 360 (637)
T ss_pred cCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcc------------
Confidence 999999998764 6668999999998763 6899999999999999999999999886521110
Q ss_pred HHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC---CceEeeeccccCCC
Q 008787 346 DALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC---AFLVQGYGLTETCG 422 (553)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~---~~i~~~YG~tE~g~ 422 (553)
....+ +++||.+++||+++++++.+++.+.++ +++++.||+||++.
T Consensus 361 -----------------------~~~~~--------~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~ 409 (637)
T PRK00174 361 -----------------------PKKYD--------LSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGG 409 (637)
T ss_pred -----------------------cccCC--------ccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCC
Confidence 00001 148999999999999999999998875 78999999999988
Q ss_pred ceeeccCCC-ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec--CCccccccCChhhhhhhc---cCCccc
Q 008787 423 PTTVCFPDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--KTLFSGYYKNPDLTRESI---IDGWFH 496 (553)
Q Consensus 423 ~~~~~~~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~ 496 (553)
......... ....+++|+|++|++++++| +++. +++.|+.|||+|+| |.++.||+++++.+.+.+ .+|||+
T Consensus 410 ~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~--~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~ 486 (637)
T PRK00174 410 IMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGN--PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYF 486 (637)
T ss_pred ceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCC--CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEE
Confidence 665443322 23447899999999999999 6554 34567899999999 689999999999887765 478999
Q ss_pred cCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 497 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 497 TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|||+|++|+||++++.||.+|+|++ +|++|+|.+||++|.+||+|.+|+|+|.++
T Consensus 487 TGDl~~~d~dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~ 541 (637)
T PRK00174 487 TGDGARRDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKVAEAAVVGRPD 541 (637)
T ss_pred CCceEEEcCCCcEEEEEecccEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEc
Confidence 9999999999999999999999997 799999999999999999999999999865
No 29
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4e-59 Score=496.88 Aligned_cols=437 Identities=20% Similarity=0.210 Sum_probs=346.0
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCC----CCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKF----GPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVE 116 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~----~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~ 116 (553)
..|+.+.|.+.++++|+++|+++. +..+ ..++++||+||.+++.++|++|.+.|+++||+|+++++|++++++
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~ 81 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA 81 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH
Confidence 367889999999999999999875 3211 223479999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch--hhhhhhccccccccCccEEEEecCCchHHHHHHhhCC
Q 008787 117 AMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK--KVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTG 194 (553)
Q Consensus 117 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (553)
+++||+++|++++|+++.++.+++.++++.++++++|++.. ....+.... ......++.++... .
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~----------~ 148 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG---KPSVRRLVTVGGRL----------L 148 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC---ccchhheecccccc----------c
Confidence 99999999999999999999999999999999999998752 222121110 01222233322210 0
Q ss_pred ceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecC
Q 008787 195 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLP 274 (553)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 274 (553)
.....+.++...............++++++++|||||||.||+|.+||+++...+......+ ++..+++.++.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p 223 (552)
T PRK09274 149 WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-----GIEPGEIDLPTFP 223 (552)
T ss_pred cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-----CCCCCceeeeccC
Confidence 01123444432221222223345678999999999999999999999999998887766655 6778899999999
Q ss_pred hHHHHHHHHHHHHHHcCcEEEEec--------CChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 275 LAHILDRVIEEYFFRRGASVGYYH--------GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 275 ~~~~~g~~~~~~~l~~g~~~~~~~--------~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
++|.+++ ..|+++++.. .+++.+++.|+++++|+++++|+++..|.+......
T Consensus 224 l~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~------------ 284 (552)
T PRK09274 224 LFALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANG------------ 284 (552)
T ss_pred HHHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcC------------
Confidence 9876553 3477766643 278999999999999999999999999876322110
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc--CCceEeeeccccCCCce
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFLVQGYGLTETCGPT 424 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~i~~~YG~tE~g~~~ 424 (553)
...+++|.+++||+++++++.+++++.+ |+++++.||+||+++++
T Consensus 285 ---------------------------------~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~ 331 (552)
T PRK09274 285 ---------------------------------IKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPIS 331 (552)
T ss_pred ---------------------------------CCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeE
Confidence 0114899999999999999999999998 46999999999998765
Q ss_pred eeccCC---------CccccCccCCCCCCeeEEEeecCCC-------CCCCCCCCCCCeEEEecCCccccccCChhhhhh
Q 008787 425 TVCFPD---------EMCMVGTAGPVSVYSELRLEEVPEM-------GYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRE 488 (553)
Q Consensus 425 ~~~~~~---------~~~~~~~~G~~~~~~~v~i~~~~~~-------~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~ 488 (553)
...... ......++|+|+|+++++|+| +.+ ...+++.|+.|||+|+|++++.||+++++.+..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd-~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~ 410 (552)
T PRK09274 332 SIESREILFATRAATDNGAGICVGRPVDGVEVRIIA-ISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRL 410 (552)
T ss_pred eecchhhhccccccccCCCCcccCccCCCceEEEEe-ccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhh
Confidence 543221 111223789999999999998 422 224567789999999999999999999999987
Q ss_pred hc---cCC--ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 489 SI---IDG--WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 489 ~~---~~g--~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.+ .+| ||+|||+|++|+||+|+++||.+|+|++ +|++|+|.+||++|.+||+|.+|+|+|.++
T Consensus 411 ~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~ 478 (552)
T PRK09274 411 AKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVET-AGGTLYTIPCERIFNTHPGVKRSALVGVGV 478 (552)
T ss_pred hhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEE-CCEEECcHHHHHHHHhCcccceeEEEEeCC
Confidence 76 356 9999999999999999999999999997 899999999999999999999999999865
No 30
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.1e-58 Score=491.26 Aligned_cols=460 Identities=23% Similarity=0.283 Sum_probs=354.4
Q ss_pred cceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCC
Q 008787 23 PVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPG 101 (553)
Q Consensus 23 ~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~g 101 (553)
.++++......+|.. +..++.+.+... +.+|+++|+++. +. + ..+||.||.++++++|++|.+ .|+++|
T Consensus 23 ~~~~~~~~~~~~~~~--~~~~~~~~l~~~-~~~~~~~a~~~~---~~--~--~~~Ty~el~~~~~~lA~~L~~~~G~~~g 92 (560)
T PLN02574 23 GIYSSKHPPVPLPSD--PNLDAVSFIFSH-HNHNGDTALIDS---ST--G--FSISYSELQPLVKSMAAGLYHVMGVRQG 92 (560)
T ss_pred eeecCCCCCCCCCCC--CCCCHHHHHhcC-cccCCCCEEEEC---CC--C--CcccHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 456655432223221 223444444333 678999999854 22 2 369999999999999999998 899999
Q ss_pred CEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecC
Q 008787 102 CRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS 181 (553)
Q Consensus 102 d~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (553)
|+|+++++|+.++++++|||+++|++++|++|..+.+++.++++.+++++++++......+... ... ++.+..
T Consensus 93 d~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~ 165 (560)
T PLN02574 93 DVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL------GVP-VIGVPE 165 (560)
T ss_pred CEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc------CCc-EEecCc
Confidence 9999999999999999999999999999999999999999999999999999998765554221 111 222211
Q ss_pred CchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccC
Q 008787 182 LTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFED 261 (553)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~ 261 (553)
.... ........+|.+++..... ..+.....++++++++|||||||.||+|++||+++...+..+.........
T Consensus 166 ~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 239 (560)
T PLN02574 166 NYDF-----DSKRIEFPKFYELIKEDFD-FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYE 239 (560)
T ss_pred cccc-----ccCccCcccHHHHhhcCCc-ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccc
Confidence 1000 0000112345555443311 122334467899999999999999999999999998877654321111011
Q ss_pred CCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhch
Q 008787 262 KMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRP 339 (553)
Q Consensus 262 ~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~ 339 (553)
.....++++..+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..|++.....
T Consensus 240 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------ 313 (560)
T PLN02574 240 YPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGV------ 313 (560)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcccc------
Confidence 1235688899999999999876 4456788999888876 9999999999999999999999999986531100
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccc
Q 008787 340 LRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLT 418 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~t 418 (553)
.. ...+++|.+++||+++++++.+.+.+.+ +..+++.||+|
T Consensus 314 ------------------------------~~--------~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~t 355 (560)
T PLN02574 314 ------------------------------CG--------EVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMT 355 (560)
T ss_pred ------------------------------cc--------CccccceEEEEecccCCHHHHHHHHHHCCCCcEEeccccc
Confidence 00 0114899999999999999999998887 78999999999
Q ss_pred cCCCceeeccC-CCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccc
Q 008787 419 ETCGPTTVCFP-DEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFH 496 (553)
Q Consensus 419 E~g~~~~~~~~-~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~ 496 (553)
|++.+.+.... ......+++|++.|+++++|+| ++++ .++++|+.|||+|+|++++.||+++++.+.+.| .+|||+
T Consensus 356 E~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~g-~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~ 433 (560)
T PLN02574 356 ESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVD-WSTG-CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLR 433 (560)
T ss_pred ccCceeecCCCccccCCCCceeeeCCCcEEEEEe-CCCC-cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcc
Confidence 99876543222 2223457899999999999999 4433 456678999999999999999999999998887 689999
Q ss_pred cCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 497 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 497 TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|||+|++|+||++++.||.+|+|++ +|++++|.+||++|.+||+|.|++|+|.++
T Consensus 434 TGDlg~~~~~G~l~i~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~ 488 (560)
T PLN02574 434 TGDIAYFDEDGYLYIVDRLKEIIKY-KGFQIAPADLEAVLISHPEIIDAAVTAVPD 488 (560)
T ss_pred cceEEEEECCCeEEEEecchhheEE-CCEEECHHHHHHHHHhCCCcceEEEEcccc
Confidence 9999999999999999999999997 799999999999999999999999999865
No 31
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-59 Score=492.83 Aligned_cols=447 Identities=20% Similarity=0.186 Sum_probs=348.9
Q ss_pred CCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh
Q 008787 34 FPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ 113 (553)
Q Consensus 34 ~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~ 113 (553)
+..+.....++.+.|.++|+++|+++|+++. ++. +.+||+||.+++.++|+.|.+.|+++||+|+++++|+++
T Consensus 6 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e 78 (540)
T PRK05857 6 FQAMPQLPSTVLDRVFEQARQQPEAIALRRC---DGT----SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE 78 (540)
T ss_pred ccccccCCcchHHHHHHHHhhCCCcEEEeec---CCC----ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH
Confidence 4455566789999999999999999999864 331 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhC
Q 008787 114 WVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQT 193 (553)
Q Consensus 114 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (553)
+++++|||+++|++++|+++..+.+++.++++.++++++++++...... ........... ++.++.....
T Consensus 79 ~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-------- 148 (540)
T PRK05857 79 TYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMAS-SAVPEALHSIP-VIAVDIAAVT-------- 148 (540)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcc-ccccccccccc-eeEeeccccc--------
Confidence 9999999999999999999999999999999999999999987653221 11111111111 2222211100
Q ss_pred CceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEec
Q 008787 194 GIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFL 273 (553)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (553)
. . +...... ..........++++++++|||||||.||+|.+||+++.+......... ........+++.++.+
T Consensus 149 --~-~-~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 221 (540)
T PRK05857 149 --R-E-SEHSLDA--ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEG-LNWVTWVVGETTYSPL 221 (540)
T ss_pred --c-c-ccccccc--cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcc-ccccccccCceeeecC
Confidence 0 0 0000000 001112334678999999999999999999999999987654322110 0001345678999999
Q ss_pred ChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 008787 274 PLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 353 (553)
Q Consensus 274 p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
|++|.+++...+.+++.|+++++.+.++..+++.++++++|+++++|.++..|++......
T Consensus 222 p~~h~~~l~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~------------------- 282 (540)
T PRK05857 222 PATHIGGLWWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSAN------------------- 282 (540)
T ss_pred CccccchHHHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCC-------------------
Confidence 9999999887777899999987766689999999999999999999999998865321100
Q ss_pred HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC--
Q 008787 354 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-- 431 (553)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~-- 431 (553)
. ..+++|.+++||++++....+++ +.+++++++.||+||++..........
T Consensus 283 ------------------~--------~~~~lr~~~~gG~~~~~~~~~~~-~~~g~~i~~~YG~TE~~~~~~~~~~~~~~ 335 (540)
T PRK05857 283 ------------------A--------TVPSLRLVGYGGSRAIAADVRFI-EATGVRTAQVYGLSETGCTALCLPTDDGS 335 (540)
T ss_pred ------------------C--------cCccceEEEEcCccCCchhHHHH-HHhCCeeecccCCCcCCceeeeccccccc
Confidence 0 11489999999999998877654 466999999999999986544332221
Q ss_pred --ccccCccCCCCCCeeEEEeecCCCCC-CC---CCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEcc
Q 008787 432 --MCMVGTAGPVSVYSELRLEEVPEMGY-SP---LDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILP 505 (553)
Q Consensus 432 --~~~~~~~G~~~~~~~v~i~~~~~~~~-~~---~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~ 505 (553)
....+++|+|++|++++|++ +++.. .+ .+.++.|||+|+|++++.||+++++.+.+.|.+|||+|||+|++|+
T Consensus 336 ~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~ 414 (540)
T PRK05857 336 IVKIEAGAVGRPYPGVDVYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERRE 414 (540)
T ss_pred ccccccCCcCcccCCcEEEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcC
Confidence 12347899999999999998 54432 11 2346889999999999999999999999999999999999999999
Q ss_pred CCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 506 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 506 dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||++++.||.+|+|++ +|++++|.+||++|..||+|.+|+|+|.++
T Consensus 415 ~g~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~ 460 (540)
T PRK05857 415 DGFFYIKGRSSEMIIC-GGVNIAPDEVDRIAEGVSGVREAACYEIPD 460 (540)
T ss_pred CceEEEeccccccEec-CCEEECHHHHHHHHHhCCCeeEEEEEecCc
Confidence 9999999999999996 899999999999999999999999999875
No 32
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=7e-58 Score=485.47 Aligned_cols=458 Identities=27% Similarity=0.352 Sum_probs=368.7
Q ss_pred CCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCC
Q 008787 20 SVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAE 99 (553)
Q Consensus 20 ~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~ 99 (553)
+++-+||+-+..... ....++.+.+.++++++|+++|+++. + ++ +++||.||.++++++|+.|.+.|++
T Consensus 5 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~a~~~~---~--~~--~~~ty~el~~~~~~la~~L~~~g~~ 73 (537)
T PLN02246 5 SEEFIFRSKLPDIYI----PNHLPLHDYCFERLSEFSDRPCLIDG---A--TG--RVYTYADVELLSRRVAAGLHKLGIR 73 (537)
T ss_pred cceeEecCCCCCCCC----CCCCcHHHHHHHHHHhCCCCeEEEec---C--CC--ceeeHHHHHHHHHHHHHHHHHhCCC
Confidence 456678877655433 33568999999999999999999854 2 12 5799999999999999999999999
Q ss_pred CCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEe
Q 008787 100 PGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCF 179 (553)
Q Consensus 100 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (553)
+||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.+++++++++......+.+.... .. ..++.+
T Consensus 74 ~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~-~~~i~~ 150 (537)
T PLN02246 74 QGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED--DG-VTVVTI 150 (537)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc--CC-ceEEEe
Confidence 999999999999999999999999999999999999999999999999999999988766554332211 11 234444
Q ss_pred cCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccc
Q 008787 180 TSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQF 259 (553)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~ 259 (553)
++... ...++.++.... ....+.....++++++++|||||||.||+|+++|+++............ .
T Consensus 151 ~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~-~ 217 (537)
T PLN02246 151 DDPPE-----------GCLHFSELTQAD-ENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGEN-P 217 (537)
T ss_pred CCCCC-----------CceeHHHHhcCC-CCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccc-c
Confidence 43211 123455544332 1222333456789999999999999999999999999887664332110 0
Q ss_pred cCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhh
Q 008787 260 EDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEEL 337 (553)
Q Consensus 260 ~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 337 (553)
...+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+++..|.+....
T Consensus 218 ~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----- 292 (537)
T PLN02246 218 NLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVV----- 292 (537)
T ss_pred ccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccc-----
Confidence 125778999999999999999865 5567899999999877 899999999999999999999999887642110
Q ss_pred chHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeec
Q 008787 338 RPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYG 416 (553)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG 416 (553)
...++ +++|.+++||+++++++.+.+++.+ +..+++.||
T Consensus 293 --------------------------------~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG 332 (537)
T PLN02246 293 --------------------------------EKYDL--------SSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYG 332 (537)
T ss_pred --------------------------------cccCc--------cceeEEEEecCcCCHHHHHHHHHHcCCCeEecccc
Confidence 00011 3899999999999999999999988 678999999
Q ss_pred cccCCCceeeccC----CCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-c
Q 008787 417 LTETCGPTTVCFP----DEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I 491 (553)
Q Consensus 417 ~tE~g~~~~~~~~----~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~ 491 (553)
+||++.+++.... ......+++|+|++++++++++ ++++ .+++.|+.|||+++|+.++.||+++++.+.+.+ .
T Consensus 333 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~ 410 (537)
T PLN02246 333 MTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVD-PETG-ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDK 410 (537)
T ss_pred ccccCcccccccccCCCCccccCCccccccCCcEEEEec-CCCC-CcCCCCCceEEEEECCchhccccCCchhhhhcccC
Confidence 9999876554321 1122346899999999999998 4333 456677999999999999999999999998888 6
Q ss_pred CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 492 DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 492 ~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|||+|||+|++++||++++.||.+|+|++ +|++|+|.+||+.|.+||+|.+|+|+|.++
T Consensus 411 ~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 470 (537)
T PLN02246 411 DGWLHTGDIGYIDDDDELFIVDRLKELIKY-KGFQVAPAELEALLISHPSIADAAVVPMKD 470 (537)
T ss_pred CCCeeecceEEEeCCCeEEEEecccceEEE-CCEEECcHHHHHHHHhCCCeeEEEEEcccC
Confidence 899999999999999999999999999997 799999999999999999999999999764
No 33
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-58 Score=495.86 Aligned_cols=453 Identities=16% Similarity=0.171 Sum_probs=352.0
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
.+...++|+++++.+|+++|+++. +..++..+++||+||.+++.++|+.|++.|+++||+|+++++|+++++++++|
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 128 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLA 128 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 455688898888899999999875 43334457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh---------hhhhccccccccCccEEEEecCCchHHHHHHh
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAV 191 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (553)
|+++|++++|+++..+.+++.+++++++++++|+++... ..+.++..........++.++...... .
T Consensus 129 ~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~ 204 (629)
T PRK10524 129 CARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM----A 204 (629)
T ss_pred HHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----C
Confidence 999999999999999999999999999999999876421 111111111112233444444321000 0
Q ss_pred hCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhh-chhhhccccCCCCCCcEEE
Q 008787 192 QTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKMTVDDVYL 270 (553)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 270 (553)
........+.++.........+.....++++++++|||||||.||+|+++|.+++..... ....+ ++..+|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~ 279 (629)
T PRK10524 205 RVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF-----GGKAGETFF 279 (629)
T ss_pred cccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 001112345555543222222223346789999999999999999999999987644333 22223 677889999
Q ss_pred EecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHH
Q 008787 271 SFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRI 344 (553)
Q Consensus 271 ~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 344 (553)
+..|+.|..+... ++.++..|+++++.++ ++..+++.++++++|++.++|++++.|.+....
T Consensus 280 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------ 347 (629)
T PRK10524 280 CASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPA------------ 347 (629)
T ss_pred EcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcc------------
Confidence 9999999888754 5668999999998764 688999999999999999999999887542100
Q ss_pred HHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCce
Q 008787 345 FDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPT 424 (553)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~ 424 (553)
.....++ ++||.+++||+++++++.+++.+.++.++++.||+||++...
T Consensus 348 -----------------------~~~~~~l--------~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~ 396 (629)
T PRK10524 348 -----------------------LLRKHDL--------SSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPI 396 (629)
T ss_pred -----------------------cccccCh--------hheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchh
Confidence 0011112 389999999999999999999999999999999999998533
Q ss_pred eeccCC---CccccCccCCCCCCeeEEEeecC-CCCCCCCCCCCCCeEEEecC---CccccccCChhhhhhhc----cCC
Q 008787 425 TVCFPD---EMCMVGTAGPVSVYSELRLEEVP-EMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESI----IDG 493 (553)
Q Consensus 425 ~~~~~~---~~~~~~~~G~~~~~~~v~i~~~~-~~~~~~~~~~~~Gei~v~~~---~~~~gy~~~~~~~~~~~----~~g 493 (553)
...... .....+++|.|++|++++++| + ++ .+++.|+.|||+++|| ..+.+|+++++.+.+.+ .++
T Consensus 397 ~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~g--~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (629)
T PRK10524 397 LAIARGVEDRPTRLGSPGVPMYGYNVKLLN-EVTG--EPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQ 473 (629)
T ss_pred hcCCCCcccCcCCCCCcccCcCCceEEEEe-CCCC--CCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCc
Confidence 322211 123357899999999999999 5 44 3456779999999998 47789999998776654 368
Q ss_pred ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 494 WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 494 ~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+|||+|++|+||+++++||.+|+|++ +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 474 ~~~TGDl~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d 531 (629)
T PRK10524 474 VYSTFDWGIRDADGYYFILGRTDDVINV-AGHRLGTREIEESISSHPAVAEVAVVGVKD 531 (629)
T ss_pred EEEcCCcEEEcCCCcEEEEEEecCeEEe-CCEEeCHHHHHHHHHhCCCcceEEEEcccc
Confidence 9999999999999999999999999997 799999999999999999999999999875
No 34
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-58 Score=484.44 Aligned_cols=431 Identities=19% Similarity=0.192 Sum_probs=351.4
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.++.+.|.++++++|+++|+++. + +++||.||.++++++|.+|.+.|+++|++|+++++|++++++++|||
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 113 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAA 113 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHH
Confidence 57999999999999999999853 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHH
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 201 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (553)
+++|++++|+++.++.+++.++++.++++++|++......+..... ..+....++...+.. ....++
T Consensus 114 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~~~~ 180 (537)
T PRK13382 114 NRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALA-DCPQATRIVAWTDED------------HDLTVE 180 (537)
T ss_pred HHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHh-hccccceEEEecCCc------------ccccHH
Confidence 9999999999999999999999999999999999776554432221 112222233332211 012344
Q ss_pred HHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHH
Q 008787 202 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 281 (553)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 281 (553)
.+....... ......++.++++|||||||.||+|.++|.++..........+ .+..+++++...|++|.+|+
T Consensus 181 ~~~~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~ 252 (537)
T PRK13382 181 VLIAAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-----PWRAEEPTVIVAPMFHAWGF 252 (537)
T ss_pred HHhhccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-----CCCCCCeEEEecChHhhhHH
Confidence 443322111 1123467889999999999999999999988887766655544 56778899999999999998
Q ss_pred HHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccC
Q 008787 282 VIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGY 360 (553)
Q Consensus 282 ~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (553)
...+.++..|+++++... +++.+++.++++++|++.++|+++..|++.....
T Consensus 253 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~--------------------------- 305 (537)
T PRK13382 253 SQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEV--------------------------- 305 (537)
T ss_pred HHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchh---------------------------
Confidence 777788889999888765 8999999999999999999999999886521110
Q ss_pred CcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCC
Q 008787 361 KQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGP 440 (553)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~ 440 (553)
.+..+ ++++|.+++||+++++++.+.|.+.++.++++.||+||++.+++.+........+++|+
T Consensus 306 --------~~~~~--------~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~ 369 (537)
T PRK13382 306 --------RNRYS--------GRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGR 369 (537)
T ss_pred --------cccCC--------ccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccc
Confidence 00001 13799999999999999999999999999999999999988766554333334578999
Q ss_pred CCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCcee
Q 008787 441 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIK 520 (553)
Q Consensus 441 ~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~ 520 (553)
|+++++++++| +++. +++.|+.|||+++|++++.||+ ++.+. .+.+|||+|||++++++||++++.||.+|+|+
T Consensus 370 p~~~~~~~i~d-~~~~--~~~~g~~GEl~v~g~~~~~gY~--~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik 443 (537)
T PRK13382 370 PAEGTEIRILD-QDFR--EVPTGEVGTIFVRNDTQFDGYT--SGSTK-DFHDGFMASGDVGYLDENGRLFVVGRDDEMIV 443 (537)
T ss_pred cCcCcEEEEEC-CCCC--CCCCCCeeEEEEEcCCcccCcc--ccchh-hccCCCEeeCceEEEeCCCcEEEeccccceeE
Confidence 99999999999 5554 4556789999999999999997 44443 35689999999999999999999999999999
Q ss_pred cCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 521 ISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 521 ~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
. +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 444 ~-~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~ 474 (537)
T PRK13382 444 S-GGENVYPIEVEKTLATHPDVAEAAVIGVDD 474 (537)
T ss_pred E-CCEEECHHHHHHHHHhCCCEeeEEEEccCc
Confidence 6 899999999999999999999999999875
No 35
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-57 Score=484.62 Aligned_cols=446 Identities=25% Similarity=0.329 Sum_probs=362.0
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCchhHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~-gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
+..++.+.|.++++++|+++|+++. + +++||+||.+++.++|..|.+. |+++|++|+++++|++++++++
T Consensus 8 ~~~tl~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~ 78 (546)
T PRK08314 8 PETSLFHNLEVSARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAY 78 (546)
T ss_pred CCCCHHHHHHHHHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHH
Confidence 3568999999999999999999875 3 4799999999999999999999 9999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCch--H-----HHHHH-
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA--E-----QKEMA- 190 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~- 190 (553)
+||+++|++++|+++..+.+++.++++.+++++++++......+....... ....++....... . ...+.
T Consensus 79 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 79 YAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--RLRHVIVAQYSDYLPAEPEIAVPAWLR 156 (546)
T ss_pred HHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--CcceEEEecchhhcccccccCcccccc
Confidence 999999999999999999999999999999999999988766554322211 2222332211000 0 00000
Q ss_pred ------hhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCC
Q 008787 191 ------VQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT 264 (553)
Q Consensus 191 ------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~ 264 (553)
.........|++...... ........++++++++|||||||.||+|.+||++++..+......+ .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~ 229 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-----NST 229 (546)
T ss_pred cccccccccccccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCC
Confidence 000113345555554321 1223345778999999999999999999999999998887766555 678
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHH
Q 008787 265 VDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRR 342 (553)
Q Consensus 265 ~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~ 342 (553)
.+|++++.+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..++....
T Consensus 230 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~----------- 298 (546)
T PRK08314 230 PESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPG----------- 298 (546)
T ss_pred CCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCC-----------
Confidence 8999999999999999865 5678999999999876 89999999999999999999999988753100
Q ss_pred HHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCC
Q 008787 343 RIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCG 422 (553)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~ 422 (553)
....++ +++|.+++||+++++++.+++.+.++.++++.||+||++.
T Consensus 299 --------------------------~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 344 (546)
T PRK08314 299 --------------------------LAERDL--------SSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMA 344 (546)
T ss_pred --------------------------ccccCc--------hhhheeeeccccCCHHHHHHHHHHcCCcEEeccccccccc
Confidence 011112 3799999999999999999999988999999999999987
Q ss_pred ceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc--C--CccccC
Q 008787 423 PTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--D--GWFHTG 498 (553)
Q Consensus 423 ~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TG 498 (553)
.......... ...++|.|+++++++++| ++.+ .+++.|+.|||+|+|++++.||+++++.+.+.|. + +||+||
T Consensus 345 ~~~~~~~~~~-~~~~~G~~~~g~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TG 421 (546)
T PRK08314 345 QTHSNPPDRP-KLQCLGIPTFGVDARVID-PETL-EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTG 421 (546)
T ss_pred ceecCCCcCC-CCCccCcccCCeEEEEEe-CCCC-cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecC
Confidence 7665443322 347899999999999999 4333 4455678999999999999999999999988772 3 499999
Q ss_pred ceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 499 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 499 D~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|+++++|++++.||.+|+|++ +|++++|.+||++|.+||+|.+++|+|.++
T Consensus 422 Dl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~ 474 (546)
T PRK08314 422 DLGRMDEEGYFFITDRLKRMINA-SGFKVWPAEVENLLYKHPAIQEACVIATPD 474 (546)
T ss_pred CEEEEcCCCcEEEEecchhhEEe-CCEEECHHHHHHHHHhCcchheEEEEeCCC
Confidence 99999999999999999999997 799999999999999999999999999765
No 36
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-57 Score=476.19 Aligned_cols=416 Identities=25% Similarity=0.335 Sum_probs=352.7
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
|+++.+.|.+++.++||++|+++. + +.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEFE----E-----KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 578999999999999999999864 2 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.++++.++++........... ...+
T Consensus 72 ~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~------------------------------~~~~ 121 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI------------------------------SVKF 121 (483)
T ss_pred HHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc------------------------------cccH
Confidence 9999999999999999999999999999999999876543321100 0113
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
+++...............++++++++|||||||.||+|.+||.++...+......+ ++..+|++++.+|++|.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g 196 (483)
T PRK03640 122 AELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-----GLTEDDCWLAAVPIFHISG 196 (483)
T ss_pred HHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-----CCCcCcEEEEecCHHHHHH
Confidence 33322211111222334678999999999999999999999999887766555444 6788999999999999999
Q ss_pred HHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhcc
Q 008787 281 RVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMG 359 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (553)
+...+.++..|+++++.+. ++..+++.++++++|++.++|+++..|.+.+...
T Consensus 197 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-------------------------- 250 (483)
T PRK03640 197 LSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-------------------------- 250 (483)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc--------------------------
Confidence 8877788899999999887 9999999999999999999999999886422110
Q ss_pred CCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeecc-CCCccccCcc
Q 008787 360 YKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCF-PDEMCMVGTA 438 (553)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~-~~~~~~~~~~ 438 (553)
....++|.+++||+++++.+.+.+++. ++++++.||+||++...+... .......+++
T Consensus 251 --------------------~~~~~lr~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~v 309 (483)
T PRK03640 251 --------------------TYPSSFRCMLLGGGPAPKPLLEQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSA 309 (483)
T ss_pred --------------------ccCCcceEEEEcCCCCCHHHHHHHHHh-CCCeeeeeccCcccccccccCcccccccCCCc
Confidence 001389999999999999999988875 999999999999876544333 2234445899
Q ss_pred CCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCc
Q 008787 439 GPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNL 518 (553)
Q Consensus 439 G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~ 518 (553)
|+|++++++++.+ ++ .+++.++.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++++||++++.||.+|+
T Consensus 310 G~p~~~~~~~i~~-~~---~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~ 385 (483)
T PRK03640 310 GKPLFPCELKIEK-DG---VVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDL 385 (483)
T ss_pred ccccCCcEEEEec-CC---CcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcCCCCEEEeecccCe
Confidence 9999999999988 43 3566778999999999999999999999999899999999999999999999999999999
Q ss_pred eecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 519 IKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 519 i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++ +|.+++|.+||+.+.++|+|.+++|++.++
T Consensus 386 i~~-~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~ 418 (483)
T PRK03640 386 IIS-GGENIYPAEIEEVLLSHPGVAEAGVVGVPD 418 (483)
T ss_pred EEe-CCEEECHHHHHHHHHhCCCeeEEEEEeCCC
Confidence 996 899999999999999999999999998765
No 37
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-57 Score=478.87 Aligned_cols=424 Identities=23% Similarity=0.276 Sum_probs=351.5
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..+.+.|.++|+.+|+++|+++. + +.+||.||.++++++|++|++ .|+++|++|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la 72 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIITE----E-----EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFA 72 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC----C-----ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 46889999999999999999853 3 589999999999999999985 6999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.++++++++++.....+...... .....++.+. ++
T Consensus 73 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~------------------~~ 132 (496)
T PRK06839 73 IAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKV--SYVQRVISIT------------------SL 132 (496)
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhc--cCcceEEEec------------------ch
Confidence 999999999999999999999999999999999988765544222111 1112222222 12
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.++.... ........++++++++|||||||.||+|.++|.++..........+ ++..++++++.+|++|.+|
T Consensus 133 ~~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g 204 (496)
T PRK06839 133 KEIEDRK---IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-----DLTMHDRSIVLLPLFHIGG 204 (496)
T ss_pred HhhhccC---CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-----CCCCCCeEEEeeCCcchhh
Confidence 2222111 1122234568899999999999999999999999876655444433 6778899999999999999
Q ss_pred HHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 281 RVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 281 ~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
+.. .+.++..|+++++.+. +++.+++.++++++|++.++|.+++.+++.....
T Consensus 205 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------- 259 (496)
T PRK06839 205 IGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFE------------------------- 259 (496)
T ss_pred HHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccc-------------------------
Confidence 875 4567889999888766 9999999999999999999999999986531100
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCC-CccccCc
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD-EMCMVGT 437 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~-~~~~~~~ 437 (553)
. ...+++|.+++||+++++++.+.+++. |+++.+.||+||++...+..... .....++
T Consensus 260 ------------~--------~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 318 (496)
T PRK06839 260 ------------T--------TNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGS 318 (496)
T ss_pred ------------c--------CCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEecccccccccCCC
Confidence 0 011489999999999999999999887 99999999999998765544322 2334578
Q ss_pred cCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccC
Q 008787 438 AGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKN 517 (553)
Q Consensus 438 ~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d 517 (553)
+|+|+++.++++++ +++.. ++.|+.|||+|+|+.++.||+++++.+...+.+|||+|||+|++|+||++++.||.+|
T Consensus 319 ~G~p~~~~~~~i~d-~~~~~--~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d 395 (496)
T PRK06839 319 IGKPVLFCDYELID-ENKNK--VEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKE 395 (496)
T ss_pred CcccCCCceEEEEC-CCcCC--CCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccc
Confidence 99999999999999 65554 5677999999999999999999999999888999999999999999999999999999
Q ss_pred ceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 518 LIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 518 ~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|+. +|++++|.+||++|.++|+|.+|+|+|+++
T Consensus 396 ~i~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~ 429 (496)
T PRK06839 396 MIIS-GGENIYPLEVEQVINKLSDVYEVAVVGRQH 429 (496)
T ss_pred eEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccc
Confidence 9996 899999999999999999999999999865
No 38
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2.4e-57 Score=479.58 Aligned_cols=445 Identities=23% Similarity=0.293 Sum_probs=359.3
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|+++++++|+++|+++. + ..+.++.+||.||.++++++|..|.++|+++||+|+++++|+.+++++++|
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~---~-~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFE---S-SGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcc---c-CCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 468999999999999999999875 4 345567899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++++++..+.+++.++++.+++++++++.+....+.+...+.....+.++..+.... ......++
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 153 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALP--------ADDGVSSF 153 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCc--------ccccccCH
Confidence 9999999999999999999999999999999999987765554433222233444554443211 01123345
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.++............+..++++++++|||||||.||+|.+||.++........... .+..++++++.+|++|..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~ 228 (517)
T PRK08008 154 TQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-----ALRDDDVYLTVMPAFHIDC 228 (517)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-----CCCCCCeEEEecCcHHHHH
Confidence 44443322111122344678999999999999999999999999986543322111 4678899999999999877
Q ss_pred HHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 281 RVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 281 ~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
... .+.++..|+++++.++ ++..+++.++++++|++.++|.+++.+........
T Consensus 229 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------------ 284 (517)
T PRK08008 229 QCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSAN------------------------ 284 (517)
T ss_pred HHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccc------------------------
Confidence 664 5667889999999877 89999999999999999999999988753210000
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCcc
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTA 438 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~ 438 (553)
. . ..+++.+.++ .+++++....+.+.++.++++.||+||++..+..........+.++
T Consensus 285 ----------~---~--------~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 342 (517)
T PRK08008 285 ----------D---R--------QHCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSI 342 (517)
T ss_pred ----------c---c--------cccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCcc
Confidence 0 0 0257777765 4788888888888889999999999999876665544444556789
Q ss_pred CCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec---CCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEec
Q 008787 439 GPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG---KTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDR 514 (553)
Q Consensus 439 G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~---~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR 514 (553)
|.|+++++++++| +++ .+++.|+.|||+++| +.++.||+++++.+.+.+ .+|||+|||+|++|+||++++.||
T Consensus 343 G~~~~g~~~~i~d-~~~--~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR 419 (517)
T PRK08008 343 GRPGFCYEAEIRD-DHN--RPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDR 419 (517)
T ss_pred ccCCCCcEEEEEC-CCC--CCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeec
Confidence 9999999999999 555 445567899999998 689999999999999888 689999999999999999999999
Q ss_pred ccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 515 KKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 515 ~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.+|+|++ +|++++|.+||++|.+||.|.+|+|+|+++
T Consensus 420 ~~d~i~~-~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~ 456 (517)
T PRK08008 420 RCNMIKR-GGENVSCVELENIIATHPKIQDIVVVGIKD 456 (517)
T ss_pred ccceEEe-CCEEECHHHHHHHHHhCCceeeEEEEccCC
Confidence 9999996 799999999999999999999999999875
No 39
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-57 Score=478.78 Aligned_cols=443 Identities=25% Similarity=0.374 Sum_probs=369.8
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
.++.++.+.|.+.++.+|+++|+++. + +++||+||.+.+.++|..|.+.|+++||+|+++++|++++++++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~ 72 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFG----D-----QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAA 72 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeC----C-----CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 45688999999999999999999864 3 48999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
+||+++|++++|+++..+.+++..+++.+++++++++........... ........++........ .......
T Consensus 73 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~ 145 (513)
T PRK07656 73 LGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSAT-TRLPALEHVVICETEEDD------PHTEKMK 145 (513)
T ss_pred HHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHH-hccCCccEEEEEcCcccc------cCccccc
Confidence 999999999999999999999999999999999999887655443322 222334444443332110 0011234
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
+|+++...... .........+++++++|||||||.||+|.++|.++...+......+ ++..++++++..|++|.
T Consensus 146 ~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 219 (513)
T PRK07656 146 TFTDFLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-----GLTEGDRYLAANPFFHV 219 (513)
T ss_pred cHHHHHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-----CCCCCCeEEEccchHHH
Confidence 56666654322 2233455788999999999999999999999999998887766665 67889999999999999
Q ss_pred HHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 279 LDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 279 ~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+++.. .+.++..|+++++.+. +++.+++.++++++|++.++|.++..|++......
T Consensus 220 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---------------------- 277 (513)
T PRK07656 220 FGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSA---------------------- 277 (513)
T ss_pred HHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCC----------------------
Confidence 99875 5668999999888765 89999999999999999999999999865321110
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCC-ceEeeeccccCCCceeeccCCCccc-
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDEMCM- 434 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~YG~tE~g~~~~~~~~~~~~~- 434 (553)
.++ +++|.+++||+++++++.+.+++.++. ++++.||+||+|++++.+.......
T Consensus 278 ---------------~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 334 (513)
T PRK07656 278 ---------------EDL--------SSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKT 334 (513)
T ss_pred ---------------CCc--------cceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccc
Confidence 011 389999999999999999999999988 8999999999988887766544322
Q ss_pred -cCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc-CCccccCceEEEccCCcEEEE
Q 008787 435 -VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-DGWFHTGDIGQILPNGVVKII 512 (553)
Q Consensus 435 -~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~g~~~~dG~l~~~ 512 (553)
..++|.|++++++++++ +++ .+++.|+.|||+++|+.++.||++++..+...+. +|||+|||+|++++||.+++.
T Consensus 335 ~~~~vG~~~~~~~~~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~ 411 (513)
T PRK07656 335 VAGTIGTAIAGVENKIVN-ELG--EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIV 411 (513)
T ss_pred cCCCccccCCCcEEEEEC-CCC--CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEE
Confidence 57899999999999999 554 4455678999999999999999999999888874 899999999999999999999
Q ss_pred ecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 513 DRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 513 GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||.+|+|++ +|.+++|.+||++|.++|+|.+++|+|.++
T Consensus 412 GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 450 (513)
T PRK07656 412 DRKKDMFIV-GGFNVYPAEVEEVLYEHPAVAEAAVIGVPD 450 (513)
T ss_pred ecccceEEe-CCEEeCHHHHHHHHHhCCCeeEEEEEecCC
Confidence 999999997 899999999999999999999999998764
No 40
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-57 Score=482.10 Aligned_cols=449 Identities=22% Similarity=0.298 Sum_probs=353.9
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
.+.|+.+.|++.++++|+++|+++. + +.+||.||.+++.++|+.|.+ .|+++||+|+++++|++++++++
T Consensus 22 ~~~~~~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~ 92 (562)
T PRK05677 22 EYPNIQAVLKQSCQRFADKPAFSNL----G-----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAV 92 (562)
T ss_pred ccCcHHHHHHHHHHhCCCCeeEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 3468999999999999999999853 3 479999999999999999997 59999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCc--hHHHHH-H-----
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLT--AEQKEM-A----- 190 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~----- 190 (553)
|||+++|++++|+++..+.+++.++++.++++++|++......+.+... . ...+.++...... ...... .
T Consensus 93 la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
T PRK05677 93 FGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLP-K-TGVKHVIVTEVADMLPPLKRLLINAVVK 170 (562)
T ss_pred HHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhh-c-cCcceeEEecccccccchhhhhcccchh
Confidence 9999999999999999999999999999999999998765543322211 1 1222232221100 000000 0
Q ss_pred -------hhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCC
Q 008787 191 -------VQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM 263 (553)
Q Consensus 191 -------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~ 263 (553)
.........+.+.+..............++++++++|||||||.||+|+++|.++..........+. ..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~---~~~ 247 (562)
T PRK05677 171 HVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG---SNL 247 (562)
T ss_pred hccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc---cCC
Confidence 0000112344554443322222233456789999999999999999999999999877655443331 122
Q ss_pred C-CCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhch
Q 008787 264 T-VDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRP 339 (553)
Q Consensus 264 ~-~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~ 339 (553)
. ..+.+++.+|++|.+++.. ++..+..|++.++.+. ++..+++.++++++|.++++|+++..+++...
T Consensus 248 ~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-------- 319 (562)
T PRK05677 248 NEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEA-------- 319 (562)
T ss_pred CCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcc--------
Confidence 2 3468899999999999875 5556777887766653 88999999999999999999999988764210
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeecccc
Q 008787 340 LRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTE 419 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE 419 (553)
.....+ +++|.+++||+++++++.+.+++.+++++++.||+||
T Consensus 320 -----------------------------~~~~~~--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE 362 (562)
T PRK05677 320 -----------------------------FRKLDF--------SALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTE 362 (562)
T ss_pred -----------------------------cccCCh--------hhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccc
Confidence 000011 3799999999999999999999989999999999999
Q ss_pred CCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccC
Q 008787 420 TCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTG 498 (553)
Q Consensus 420 ~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 498 (553)
++.+........ ...+++|+|+++++++++| +++ .+++.|+.|||+++|+.++.||+++++.+.+.| .+|||+||
T Consensus 363 ~~~~~~~~~~~~-~~~~~vG~~~~~~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TG 438 (562)
T PRK05677 363 TSPVVSVNPSQA-IQVGTIGIPVPSTLCKVID-DDG--NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTG 438 (562)
T ss_pred cCcceeecCccC-CCCCccCccCCCCEEEEEC-CCC--CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCccccc
Confidence 987766554332 2347899999999999999 554 345677999999999999999999999999888 68999999
Q ss_pred ceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 499 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 499 D~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++|+||++++.||.+|+|++ +|++++|.+||++|.+||+|.+++|+|+++
T Consensus 439 Dlg~~~~~G~l~i~GR~~d~i~~-~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~ 491 (562)
T PRK05677 439 DIALIQEDGYMRIVDRKKDMILV-SGFNVYPNELEDVLAALPGVLQCAAIGVPD 491 (562)
T ss_pred ceEEECCCCcEEEEecCcCeEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccC
Confidence 99999999999999999999997 799999999999999999999999999764
No 41
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.7e-58 Score=492.76 Aligned_cols=455 Identities=18% Similarity=0.171 Sum_probs=348.4
Q ss_pred eeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 008787 25 YRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRV 104 (553)
Q Consensus 25 ~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V 104 (553)
|+|+...+..-.. +...++.++|+++++.+|+++|+++....+..++.++.+||+||.++++++|++|.+. +++||+|
T Consensus 5 ~~~~~~~~~~~~~-~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V 82 (631)
T PRK07769 5 FHNPFDVNGKIRF-PPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRV 82 (631)
T ss_pred cCCcccccccccc-cccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEE
Confidence 4555555555432 3446899999999999999999987510011233457899999999999999999987 8999999
Q ss_pred EEEeCCchhHHHHHHHHHhcCCEEeeC-CCCCC--hhHHHHHHhhcCceEEEEcchhhhhhhccccccc-cCccEEEEec
Q 008787 105 GIYGANCPQWVEAMEACNALSLICVPL-YDTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA-QRLRVMVCFT 180 (553)
Q Consensus 105 ~l~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 180 (553)
+++++|++++++++|||+++|++++|+ ++..+ .+++.++++.++++++|++......+.+...... .....++.++
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 44443 5789999999999999998876544322111100 0112233222
Q ss_pred CCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhcccc
Q 008787 181 SLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFE 260 (553)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~ 260 (553)
.... .. ..........++++++|+|||||||.||+|++||+++...+......+
T Consensus 163 ~~~~------------------~~----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---- 216 (631)
T PRK07769 163 AVPD------------------EV----GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL---- 216 (631)
T ss_pred cccc------------------cc----ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc----
Confidence 1100 00 000111234678999999999999999999999999998877665554
Q ss_pred CCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC-----ChHHHHHHhhhhcC---cEEeechHHHHHHHHHHHH
Q 008787 261 DKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-----DLNALRDDLMELKP---TLLAGVPRVFEKIHEGIKK 332 (553)
Q Consensus 261 ~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~~~~ 332 (553)
++..++++++++|++|.+|+...+.+++.|+++++++. ++..+++.++++++ +++.++|.++..+......
T Consensus 217 -~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~ 295 (631)
T PRK07769 217 -EGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGL 295 (631)
T ss_pred -CCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhcc
Confidence 67788999999999999999877777788999888742 78899999999886 7899999988766431000
Q ss_pred HHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc---CC
Q 008787 333 ALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC---CA 409 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~---~~ 409 (553)
. .......++ +++|.+++||+++++++.++|.+.| |.
T Consensus 296 ~--------------------------------~~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~ 335 (631)
T PRK07769 296 P--------------------------------KDGEPPLDL--------SNVKGLLNGSEPVSPASMRKFNEAFAPYGL 335 (631)
T ss_pred c--------------------------------hhcccCcch--------hheeeEEeccCCCCHHHHHHHHHHHhhcCC
Confidence 0 000001112 3899999999999999999999887 33
Q ss_pred ---ceEeeeccccCCCceeeccCCCc--------------------------cccCccCCCCCCeeEEEeecCCCCCCCC
Q 008787 410 ---FLVQGYGLTETCGPTTVCFPDEM--------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPL 460 (553)
Q Consensus 410 ---~i~~~YG~tE~g~~~~~~~~~~~--------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~ 460 (553)
.+++.||+||++...+....... ....++|+|.++.+++++| ++++ .++
T Consensus 336 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd-~~~g-~~~ 413 (631)
T PRK07769 336 PPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVD-PETA-SEL 413 (631)
T ss_pred ChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEc-CCCC-cCC
Confidence 49999999998765554322110 0124789999999999998 4333 455
Q ss_pred CCCCCCeEEEecCCccccccCChhhhhhhcc------------------CCccccCceEEEccCCcEEEEecccCceecC
Q 008787 461 DDPPCGEVCVRGKTLFSGYYKNPDLTRESII------------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKIS 522 (553)
Q Consensus 461 ~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~------------------~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~ 522 (553)
+.|+.|||+|+||+++.||+++++.+++.|. +|||+|||+|+++ ||+|+|+||.+|+|++
T Consensus 414 ~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~- 491 (631)
T PRK07769 414 PDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVII- 491 (631)
T ss_pred CCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEE-
Confidence 6789999999999999999999999988873 3899999999995 9999999999999997
Q ss_pred CceeecchhHHHHHhc-CcCcce--EEEEecCC
Q 008787 523 QGEYVALEYLENVYCV-APIIED--VSISYSSV 552 (553)
Q Consensus 523 ~G~~~~~~~iE~~l~~-~p~V~~--~~V~g~~~ 552 (553)
+|++|+|.|||++|.+ ||.|.+ |+|+|+++
T Consensus 492 ~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d 524 (631)
T PRK07769 492 DGRNHYPQDLEYTAQEATKALRTGYVAAFSVPA 524 (631)
T ss_pred CCeeeCHHHHHHHHHhccccccCCcEEEEEecc
Confidence 8999999999999986 899998 99999876
No 42
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.6e-57 Score=479.55 Aligned_cols=440 Identities=22% Similarity=0.260 Sum_probs=358.1
Q ss_pred CCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHH
Q 008787 36 SVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWV 115 (553)
Q Consensus 36 ~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~ 115 (553)
..+...+++.++|.++++++|+++|+++. + +.+||.||.+++.++|..|.+.|+++|++|+++++|+++++
T Consensus 15 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~ 85 (542)
T PRK06155 15 PLPPSERTLPAMLARQAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFL 85 (542)
T ss_pred cCCccccCHHHHHHHHHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH
Confidence 34445688999999999999999999864 2 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCc
Q 008787 116 EAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGI 195 (553)
Q Consensus 116 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (553)
+++|||+++|++++|+++.++.+++..+++.+++++++++.+....+.+.... ......++.++..... .. .
T Consensus 86 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~--~- 157 (542)
T PRK06155 86 DVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPG-DLPLPAVWLLDAPASV----SV--P- 157 (542)
T ss_pred HHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccc-ccCcceEEEecCcccc----cc--c-
Confidence 99999999999999999999999999999999999999998776655332221 1233445555432110 00 0
Q ss_pred eeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecCh
Q 008787 196 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 275 (553)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 275 (553)
..+....+... ..........++++++++|||||||.||+|.++|.++..........+ .+..++++++..|+
T Consensus 158 ~~~~~~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl 230 (542)
T PRK06155 158 AGWSTAPLPPL--DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-----EIGADDVLYTTLPL 230 (542)
T ss_pred cccchhhhccc--CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-----CCCCCCEEEEecCH
Confidence 00001111111 111122334678999999999999999999999999987776655554 67888999999999
Q ss_pred HHHHHHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 276 AHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 276 ~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
+|.+++...+.++..|+++++.+. ++..+++.|+++++|.+.++|+++..|.+......
T Consensus 231 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~-------------------- 290 (542)
T PRK06155 231 FHTNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARES-------------------- 290 (542)
T ss_pred HHHHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccc--------------------
Confidence 999999877888999999988776 89999999999999999999999888764211100
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccc
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCM 434 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~ 434 (553)
...+++|.++.|| +++++.+.+++.+++++++.||+||++.++..... ...
T Consensus 291 -------------------------~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~--~~~ 341 (542)
T PRK06155 291 -------------------------DRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTHG--SQR 341 (542)
T ss_pred -------------------------cccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCCC--CCC
Confidence 0013788887666 57888999999899999999999999887665432 234
Q ss_pred cCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC---CccccccCChhhhhhhccCCccccCceEEEccCCcEEE
Q 008787 435 VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK---TLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKI 511 (553)
Q Consensus 435 ~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~---~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~ 511 (553)
.+++|.+.++++++|++ +++. +++.|+.|||+++|+ .++.||+++++.+.+.|.++||+|||+|++++||++++
T Consensus 342 ~~~vG~~~~~~~~~i~d-~~~~--~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i 418 (542)
T PRK06155 342 PGSMGRLAPGFEARVVD-EHDQ--ELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRF 418 (542)
T ss_pred CCCcCccCCCceEEEEC-CCCC--CCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEE
Confidence 47899999999999998 5543 455678999999998 68999999999999989999999999999999999999
Q ss_pred EecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 512 IDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 512 ~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.||.+|+|++ +|++++|.+||++|.+||+|.+|+|+|+++
T Consensus 419 ~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~ 458 (542)
T PRK06155 419 VDRIKDAIRR-RGENISSFEVEQVLLSHPAVAAAAVFPVPS 458 (542)
T ss_pred EecCCCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeecc
Confidence 9999999996 899999999999999999999999998764
No 43
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=4.1e-57 Score=479.73 Aligned_cols=440 Identities=23% Similarity=0.267 Sum_probs=355.7
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.++.+.|.++++.+|+++|+++. +...+..+.+||+||.+++.++|.+|++.|+++|++|+++++|+.+++++++||
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~ 98 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLAC 98 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 57999999999999999999864 223334468999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh----hhhccccccccCccEEEEecCCchHHHHHHhhCCcee
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK----ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKP 197 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (553)
+++|++++|+++..+.+++.++++.++++++++++.... ..........+....++..+... .
T Consensus 99 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 165 (538)
T TIGR03208 99 ARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDG-------------D 165 (538)
T ss_pred HhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCC-------------C
Confidence 999999999999999999999999999999999875421 00111111223334455543321 1
Q ss_pred eeHHHHHhcccccc-------cccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEE
Q 008787 198 YSWDEFLHLGKVNE-------MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYL 270 (553)
Q Consensus 198 ~~~~~l~~~~~~~~-------~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (553)
..++.++....... .......++++++++|||||||.||+|+++|+++...+......+ ++..+++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l 240 (538)
T TIGR03208 166 DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-----ELGGGDVIL 240 (538)
T ss_pred cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-----CCCCCCeEE
Confidence 12333322110000 111234678999999999999999999999999998877766555 677889999
Q ss_pred EecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 008787 271 SFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDAL 348 (553)
Q Consensus 271 ~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (553)
+.+|++|..|+.. .+.++..|+++++.+. ++..+++.++++++|++.++|.++..+.........
T Consensus 241 ~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~------------- 307 (538)
T TIGR03208 241 MASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGA------------- 307 (538)
T ss_pred EeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCC-------------
Confidence 9999999998765 5668999999888766 899999999999999999999999887653221100
Q ss_pred HHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeecc
Q 008787 349 YKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCF 428 (553)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~ 428 (553)
..+++|.+++||+++++++.+++.+.+++++++.||+||++.+.....
T Consensus 308 --------------------------------~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 355 (538)
T TIGR03208 308 --------------------------------PVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEP 355 (538)
T ss_pred --------------------------------CCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCc
Confidence 114899999999999999999999888999999999999987766544
Q ss_pred CCC-ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCC
Q 008787 429 PDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNG 507 (553)
Q Consensus 429 ~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG 507 (553)
... .....++|+|+|++++++++ +++. +++.|+.|||+++|+.++.||+++++.+.. ..+|||+|||+|++|+||
T Consensus 356 ~~~~~~~~~~~G~~~~g~~v~i~~-~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g 431 (538)
T TIGR03208 356 DDALEKASTTDGRPLPGVEVKVID-ANGA--KLSQGETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEG 431 (538)
T ss_pred ccchhhccCcccccCCCCEEEEEC-CCCC--CCcCCCCcEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCC
Confidence 322 22235789999999999999 5543 455778999999999999999999887653 368999999999999999
Q ss_pred cEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 508 VVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 508 ~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++++||.+|+|+. +|++++|.+||++|.+||+|.+++|+|.++
T Consensus 432 ~l~~~gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~ 475 (538)
T TIGR03208 432 YIRINGRSKDVIIR-GGENIPVVEIENLLYQHPAVAQVAIVAYPD 475 (538)
T ss_pred cEEEEeccCceEEE-CCEEECHHHHHHHHhcCcceeeEEEEeccC
Confidence 99999999999996 899999999999999999999999999865
No 44
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-57 Score=473.99 Aligned_cols=417 Identities=18% Similarity=0.205 Sum_probs=347.7
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
+++.+.|.++++++|+++|+.+. + +++||.||.+++.++|.+|.+.|. +|++|+++++|++++++++|||
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~ 70 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN----D-----RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGA 70 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC----C-----cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 46789999999999999999864 2 489999999999999999999985 8999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHH
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 201 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (553)
+++|++++|+++.++++++.++++.+++++++++......+... . ..++..+. +.
T Consensus 71 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------~-~~~~~~~~------------------~~ 125 (487)
T PRK07638 71 AMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE------E-GRVIEIDE------------------WK 125 (487)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc------c-ceEEEehh------------------hh
Confidence 99999999999999999999999999999999988654433110 0 11222211 11
Q ss_pred HHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHH
Q 008787 202 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 281 (553)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 281 (553)
+....... .........+++++++|||||||.||+|+++|++++..+......+ .+..+|+++...|++|..++
T Consensus 126 ~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~l 199 (487)
T PRK07638 126 RMIEKYLP-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-----HMKREDSVLIAGTLVHSLFL 199 (487)
T ss_pred hhhhhccc-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CcCCCCEEEEeecchHHHHH
Confidence 11111101 1111122356789999999999999999999999988877665554 67889999999999998887
Q ss_pred HHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccC
Q 008787 282 VIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGY 360 (553)
Q Consensus 282 ~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (553)
...+.+++.|+++++.+. ++..+++.++++++|++.++|+++..|.+...
T Consensus 200 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------------------- 250 (487)
T PRK07638 200 YGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----------------------------- 250 (487)
T ss_pred HHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC-----------------------------
Confidence 777778999999998876 89999999999999999999999998864200
Q ss_pred CcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCCccccCccC
Q 008787 361 KQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAG 439 (553)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G 439 (553)
...+.+.++++|+++++++.+++.+.+ +..+++.||+||++.++............++|
T Consensus 251 --------------------~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G 310 (487)
T PRK07638 251 --------------------VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVG 310 (487)
T ss_pred --------------------cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCC
Confidence 002456677889999999999999988 78899999999999876665543344557899
Q ss_pred CCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCce
Q 008787 440 PVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLI 519 (553)
Q Consensus 440 ~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i 519 (553)
+|+++++++|+| +++ .++++|+.|||+|+|+.++.||+++++.+.+.+.+|||+|||+|++|+||++++.||.+|+|
T Consensus 311 ~~~~~~~~~i~d-~~g--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i 387 (487)
T PRK07638 311 RPFHNVQVRICN-EAG--EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMI 387 (487)
T ss_pred cccCCcEEEEEC-CCC--CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeE
Confidence 999999999999 554 35567799999999999999999999888877789999999999999999999999999999
Q ss_pred ecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 520 KISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 520 ~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
++ +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 388 ~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 419 (487)
T PRK07638 388 LF-GGINIFPEEIESVLHEHPAVDEIVVIGVPD 419 (487)
T ss_pred Ee-CCEEECHHHHHHHHHhCCCeeeEEEEecCc
Confidence 97 899999999999999999999999999875
No 45
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4e-57 Score=482.46 Aligned_cols=444 Identities=21% Similarity=0.292 Sum_probs=339.4
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.++.+.|.++++++|+++|+.+. + .++||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~ 84 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG----K-----TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAV 84 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC----C-----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 57899999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccc----cCccEEEEecCCchHHHHHHhhCCcee
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA----QRLRVMVCFTSLTAEQKEMAVQTGIKP 197 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (553)
+++|++++|+++..+.+++.++++.++++++|++......+.+...... .....++.++...... ......
T Consensus 85 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 159 (579)
T PLN03102 85 PMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK-----RPSSEE 159 (579)
T ss_pred HhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc-----CCcccc
Confidence 9999999999999999999999999999999998776554433221100 0011233333211100 001123
Q ss_pred eeHHHHHhcccccccc----cCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEec
Q 008787 198 YSWDEFLHLGKVNEME----ILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFL 273 (553)
Q Consensus 198 ~~~~~l~~~~~~~~~~----~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (553)
.++.++.+........ .....++++++|+|||||||.||+|+++|.++........... .+...++++..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~ 234 (579)
T PLN03102 160 LDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-----EMGTCPVYLWTL 234 (579)
T ss_pred cCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-----CCCCCCeEEecC
Confidence 4556655433221111 1123568999999999999999999999999755443322211 455667889999
Q ss_pred ChHHHHHHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 008787 274 PLAHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYK 352 (553)
Q Consensus 274 p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
|++|.+|+...+.++..|+++++.+. ++..+++.|+++++|++.++|+++..|.+.......
T Consensus 235 pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~----------------- 297 (579)
T PLN03102 235 PMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLS----------------- 297 (579)
T ss_pred ChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccC-----------------
Confidence 99999998776777888888877765 888999999999999999999999998653110000
Q ss_pred HHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-
Q 008787 353 LAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE- 431 (553)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~- 431 (553)
. .++++.+++||+++++.+.+++++ +|.++++.||+||+++.........
T Consensus 298 --------------------~--------~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~~ 348 (579)
T PLN03102 298 --------------------P--------RSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDE 348 (579)
T ss_pred --------------------C--------cccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccccc
Confidence 0 025788999999999999999876 5999999999999986543321100
Q ss_pred ------------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCc
Q 008787 432 ------------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGD 499 (553)
Q Consensus 432 ------------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 499 (553)
....+..+.+.++ +.+.+.+.+...+.+.++.|||+|+|+.++.||+++++.+.+.|.+|||+|||
T Consensus 349 ~~~~~~~~~~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGD 426 (579)
T PLN03102 349 WNRLPENQQMELKARQGVSILGLAD--VDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGD 426 (579)
T ss_pred cccCCcccccccccCCCcccccccc--eEEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhccCceecCc
Confidence 0011223334444 44445222333333334689999999999999999999999999999999999
Q ss_pred eEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCCC
Q 008787 500 IGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSVS 553 (553)
Q Consensus 500 ~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~~ 553 (553)
+|++|+||+|++.||.+|+|+. +|++|+|.+||++|.+||.|.+|+|+|.+++
T Consensus 427 lg~~d~dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~ 479 (579)
T PLN03102 427 VGVIHPDGHVEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVLETAVVAMPHP 479 (579)
T ss_pred eEEEcCCCeEEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcceeEEEeccCc
Confidence 9999999999999999999996 8999999999999999999999999998763
No 46
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-57 Score=483.23 Aligned_cols=451 Identities=26% Similarity=0.375 Sum_probs=361.2
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|+++++++|+++|+++. + +.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++|
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~----~-----~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 101 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF----G-----ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYA 101 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHH
Confidence 348999999999999999999864 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHH--H-----------
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQ--K----------- 187 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------- 187 (553)
|+++|++++|+++..+.+++.+++++++++++|+++.....+.+.... .....++.+....... .
T Consensus 102 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 179 (573)
T PRK05605 102 VLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRT--TPLETIVSVNMIAAMPLLQRLALRLPIPAL 179 (573)
T ss_pred HHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhc--cccceeEeeecccccccccccccccccccc
Confidence 999999999999999999999999999999999988765544332211 1122232222110000 0
Q ss_pred ----HHHhhCCceeeeHHHHHhccccc---ccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhcccc
Q 008787 188 ----EMAVQTGIKPYSWDEFLHLGKVN---EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFE 260 (553)
Q Consensus 188 ----~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~ 260 (553)
...........+|.++....... .........+++++++|||||||.||+|.+||.++...+......+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-- 257 (573)
T PRK05605 180 RKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPG-- 257 (573)
T ss_pred cccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccc--
Confidence 00000112334566665432111 012233567899999999999999999999999998776543332210
Q ss_pred CCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhc
Q 008787 261 DKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELR 338 (553)
Q Consensus 261 ~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~ 338 (553)
....++++++.+|++|.+|+.. ...++..|+++++.+. +++.+++.++++++|++.++|.+++.|.+......
T Consensus 258 -~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~---- 332 (573)
T PRK05605 258 -LGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERG---- 332 (573)
T ss_pred -cCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccC----
Confidence 1234689999999999999876 4457889999888876 99999999999999999999999999875321110
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccc
Q 008787 339 PLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLT 418 (553)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~t 418 (553)
.++ +++|.+++||+++++++.+.+.+.++.++++.||+|
T Consensus 333 ---------------------------------~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~T 371 (573)
T PRK05605 333 ---------------------------------VDL--------SGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLT 371 (573)
T ss_pred ---------------------------------CCc--------hhccEEEECCCcCCHHHHHHHHHHhCCCeecccccc
Confidence 011 379999999999999999999988899999999999
Q ss_pred cCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccC
Q 008787 419 ETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTG 498 (553)
Q Consensus 419 E~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TG 498 (553)
|++++++.........++++|.+++++.++++| +++...+++.++.|||+++|+.++.||+++++.+.+.|.+|||+||
T Consensus 372 E~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TG 450 (573)
T PRK05605 372 ETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVD-PEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTG 450 (573)
T ss_pred hhchhhhcCCcccCCcCCccccCCCCCEEEEEc-CCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccC
Confidence 999877765544444457899999999999999 5542355667899999999999999999999999998988999999
Q ss_pred ceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 499 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 499 D~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++|++|++++.||.+|+|++ +|++++|.+||++|..||.|.+++|+|.++
T Consensus 451 D~~~~~~~g~l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~ 503 (573)
T PRK05605 451 DVVVMEEDGFIRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVEDAAVVGLPR 503 (573)
T ss_pred CEEEEcCCCcEEEEeccccceee-CCEEECHHHHHHHHHhCcccceEEEEeeec
Confidence 99999999999999999999996 899999999999999999999999999754
No 47
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=5.6e-57 Score=477.43 Aligned_cols=436 Identities=19% Similarity=0.199 Sum_probs=351.5
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|+++++++|+++|+++. + +++||.||.++++++|..|.+.|+++|++|+++++|+++++++++|
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 92 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICG----N-----RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFA 92 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeC----C-----ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 467999999999999999999853 3 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh----hhhccccccccCccEEEEecCCchHHHHHHhhCCce
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK----ELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIK 196 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (553)
|+++|++++++++..+.+++.++++.+++++++++..... ..........+....++.......
T Consensus 93 ~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 160 (527)
T TIGR02275 93 LLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRV------------ 160 (527)
T ss_pred HHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCC------------
Confidence 9999999999999999999999999999999999865321 111111111122333333322100
Q ss_pred eeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH
Q 008787 197 PYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
.......+... ..........++++++++|||||||.||+|.+||.++...+......+ .+..++++++.+|++
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~P~~ 234 (527)
T TIGR02275 161 EAELFLWLESP-AEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----WLTQQTRYLCALPAA 234 (527)
T ss_pred cchhhHHhhCc-CccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCCEEEECCChH
Confidence 00111111111 111222345678999999999999999999999999998877766555 677889999999999
Q ss_pred HHHHHHH--HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 008787 277 HILDRVI--EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 353 (553)
Q Consensus 277 ~~~g~~~--~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
|.+++.. .+.++..|+++++.+. ++..++..++++++|++.++|.++..+++......
T Consensus 235 h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~------------------- 295 (527)
T TIGR02275 235 HNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSR------------------- 295 (527)
T ss_pred hhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccC-------------------
Confidence 9999864 5667889999888765 89999999999999999999999988765322110
Q ss_pred HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCcc
Q 008787 354 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMC 433 (553)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~ 433 (553)
.+ .+++|.+++||+++++++.+.+.+.+|.++++.||+||++............
T Consensus 296 ------------------~~--------~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~ 349 (527)
T TIGR02275 296 ------------------YD--------LSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEI 349 (527)
T ss_pred ------------------CC--------ccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCcccc
Confidence 00 1389999999999999999999998999999999999965433222212222
Q ss_pred ccCccCCCC-CCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEE
Q 008787 434 MVGTAGPVS-VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKI 511 (553)
Q Consensus 434 ~~~~~G~~~-~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~ 511 (553)
...++|+|+ ++.++++++ +++. +++.|+.|||+++|++++.||+++++.+.+.+ .+|||+|||+|++++||++++
T Consensus 350 ~~~~~G~~~~~~~~v~i~d-~~g~--~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~ 426 (527)
T TIGR02275 350 IFTTQGRPMSPDDEVRVVD-DHGN--PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVV 426 (527)
T ss_pred ccccCCCCCCCCceEEEEC-CCCC--CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEE
Confidence 336789999 488999999 5543 45567999999999999999999999998888 789999999999999999999
Q ss_pred EecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 512 IDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 512 ~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.||.+|+|++ +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 427 ~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 466 (527)
T TIGR02275 427 VGRAKDQINR-GGEKIAAEEIENLLLAHPAVHDAALVSMPD 466 (527)
T ss_pred Eecccceeec-CCEEECHHHHHHHHHhCCCceEEEEEecCC
Confidence 9999999996 899999999999999999999999999875
No 48
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.8e-57 Score=477.13 Aligned_cols=444 Identities=28% Similarity=0.383 Sum_probs=374.8
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
...++.++|.++++.+|+++|+.+. + +.+||+||.+.+.++|+.|.+.|+++|++|+++++|+.+++++++
T Consensus 4 ~~~~l~~~l~~~~~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~l 74 (521)
T PRK06187 4 YPLTIGRILRHGARKHPDKEAVYFD---G------RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYF 74 (521)
T ss_pred ccCCHHHHHHHHHHHCCCceEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999875 3 369999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
||+++|++++++++..+.+++..+++.+++++++++......+.+.. ...+..+.++.+++.... ........
T Consensus 75 a~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~ 147 (521)
T PRK06187 75 AVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAIL-PQLPTVRTVIVEGDGPAA------PLAPEVGE 147 (521)
T ss_pred HHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHh-hccCCccEEEEecCcccc------cccccccc
Confidence 99999999999999999999999999999999999988766554332 233445556665543210 11123456
Q ss_pred HHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHH
Q 008787 200 WDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 279 (553)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 279 (553)
+.+++..... .........+++++++|||||||.||+|.+||.++..........+ ++..++++++..|++|.+
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~ 221 (521)
T PRK06187 148 YEELLAAASD-TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-----KLSRDDVYLVIVPMFHVH 221 (521)
T ss_pred HHHHhhcCCc-cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-----CCCCCCEEEEeCCchHHh
Confidence 6666654322 2223455678899999999999999999999999998887766655 788999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 280 DRVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 280 g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
++...+.++..|+++++++. ++..+++.++++++|.++++|+++..|++......
T Consensus 222 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~------------------------ 277 (521)
T PRK06187 222 AWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYF------------------------ 277 (521)
T ss_pred hHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCc------------------------
Confidence 98876679999999998876 89999999999999999999999999875322100
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCc-----c
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEM-----C 433 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~-----~ 433 (553)
.+ .+++|.+++||+++++++.+++.+.+++++++.||+||+|+++........ .
T Consensus 278 -------------~~--------~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 336 (521)
T PRK06187 278 -------------VD--------FSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWT 336 (521)
T ss_pred -------------cC--------cchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccc
Confidence 01 138999999999999999999999889999999999999877665543332 2
Q ss_pred ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEe
Q 008787 434 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIID 513 (553)
Q Consensus 434 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~G 513 (553)
...++|.|+++.+++|++ +++...+.+.|+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|+++++|++++.|
T Consensus 337 ~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~G 415 (521)
T PRK06187 337 KRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITD 415 (521)
T ss_pred cCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEee
Confidence 457899999999999999 6665455444899999999999999999999999999999999999999999999999999
Q ss_pred cccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 514 RKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 514 R~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|.+|+|++ +|.+++|.+||+++.++|+|.+++|++.++
T Consensus 416 R~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~ 453 (521)
T PRK06187 416 RIKDVIIS-GGENIYPRELEDALYGHPAVAEVAVIGVPD 453 (521)
T ss_pred cccceEEc-CCeEECHHHHHHHHHhCCCceEEEEEeccC
Confidence 99999997 899999999999999999999999998654
No 49
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-57 Score=479.44 Aligned_cols=444 Identities=23% Similarity=0.294 Sum_probs=348.2
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
+...++.++|+++++++|+++|+++. ++. +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (534)
T PRK05852 13 DFGPRIADLVEVAATRLPEAPALVVT---ADR----IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVAL 85 (534)
T ss_pred hhcccHHHHHHHHHHhCCCCcEEEec---CCC----CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHH
Confidence 44578999999999999999999864 321 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
|||+++|++++++++..+.+++.++++.++++++|++............ ......+.+...... .......
T Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~ 156 (534)
T PRK05852 86 LAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RWWPLTVNVGGDSGP------SGGTLSV 156 (534)
T ss_pred HHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cccceeeeecccccc------ccccccc
Confidence 9999999999999999999999999999999999988653322111100 001111111111000 0000000
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
.+..... . ...........++.++++|||||||.||+|.++|+++...+......+ .+..+|++++.+|++|.
T Consensus 157 ~~~~~~~-~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~ 229 (534)
T PRK05852 157 HLDAATE-P-TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-----RLSPRDATVAVMPLYHG 229 (534)
T ss_pred ccccccC-C-CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCcceEEEecCcchh
Confidence 0100000 0 000111122356789999999999999999999999998887776655 67889999999999999
Q ss_pred HHHHH-HHHHHHcCcEEEEecC---ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 279 LDRVI-EEYFFRRGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 279 ~g~~~-~~~~l~~g~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
+++.. ++.++..|+++++... ++..+++.++++++|.++++|.++..|.+.......
T Consensus 230 ~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~------------------- 290 (534)
T PRK05852 230 HGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPS------------------- 290 (534)
T ss_pred HHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccc-------------------
Confidence 99876 5567888888887543 788999999999999999999999988653211000
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCC----
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD---- 430 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~---- 430 (553)
....+++|.++++|+++++++.+++.+.++.++++.||+||++..++.....
T Consensus 291 ------------------------~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~ 346 (534)
T PRK05852 291 ------------------------GRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQ 346 (534)
T ss_pred ------------------------cccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCcccccc
Confidence 0011489999999999999999999999999999999999998766543221
Q ss_pred CccccCccCCC--CCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCc
Q 008787 431 EMCMVGTAGPV--SVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGV 508 (553)
Q Consensus 431 ~~~~~~~~G~~--~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~ 508 (553)
......+.|.+ .+|++++++| +++. +++.|+.|||+|+|+.++.||+++++.+.+.|.+|||+|||+|++|+||+
T Consensus 347 ~~~~~~~~g~~g~~~g~~~~i~d-~~g~--~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~ 423 (534)
T PRK05852 347 TENPVVSTGLVGRSTGAQIRIVG-SDGL--PLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDLGSLSAAGD 423 (534)
T ss_pred ccCcccccccCCCCCCCeEEEEC-CCCC--CCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccCceEEEeCCCc
Confidence 01111234444 6999999999 5554 45667999999999999999999999999999999999999999999999
Q ss_pred EEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 509 VKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 509 l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++.||.+|+|+. +|.+++|.+||++|.+||+|.+|+|+|+++
T Consensus 424 l~~~gR~~d~i~~-~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~ 466 (534)
T PRK05852 424 LSIRGRIKELINR-GGEKISPERVEGVLASHPNVMEAAVFGVPD 466 (534)
T ss_pred EEEEecchhhEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCC
Confidence 9999999999996 899999999999999999999999999875
No 50
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.9e-57 Score=488.44 Aligned_cols=447 Identities=20% Similarity=0.208 Sum_probs=344.0
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.|+.+.+..+ .+|+++|+++. + ..+..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 86 ~n~~~~~~~~--~~~~~~Al~~~---~-~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~ 159 (655)
T PRK03584 86 LNYAENLLRH--RRDDRPAIIFR---G-EDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLAT 159 (655)
T ss_pred eeHHHHhhcc--CCCCCeEEEEE---C-CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4566655543 58999999986 3 3455679999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh---------hhhhccccccccCccEEEEecCCchHHHHHHhh
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQ 192 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (553)
+++|++++|+++.++.+++.++++.++++++|+++... ..+.+.. ...+.+..++.+...... ....
T Consensus 160 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~ 235 (655)
T PRK03584 160 ASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELR-AALPSLEHVVVVPYLGPA---AAAA 235 (655)
T ss_pred HHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEecCCCc---cccc
Confidence 99999999999999999999999999999999976532 1111111 122333444444322100 0000
Q ss_pred CCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHH-HhhchhhhccccCCCCCCcEEEE
Q 008787 193 TGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATF-VSGVDLFLDQFEDKMTVDDVYLS 271 (553)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (553)
.......|++++...............+++++|+|||||||.||+|++||.+++.. .......+ ++..+|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~ 310 (655)
T PRK03584 236 ALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-----DLGPGDRFFW 310 (655)
T ss_pred ccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-----CCCCCCEEEE
Confidence 11123456666542222222334456789999999999999999999999987643 44333333 6778899999
Q ss_pred ecChHHHHHHHHHHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 272 FLPLAHILDRVIEEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 272 ~~p~~~~~g~~~~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
..++.|..+. ..+.++..|+++++.++ ++..+++.++++++|++.++|+++..+.+...
T Consensus 311 ~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--------------- 374 (655)
T PRK03584 311 YTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGL--------------- 374 (655)
T ss_pred cCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCC---------------
Confidence 9999887543 34568999999999763 78999999999999999999999988753100
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc--CCceEeeeccccCCCce
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFLVQGYGLTETCGPT 424 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~i~~~YG~tE~g~~~ 424 (553)
.+ ....++ ++||.+++||+++++++.+++.+.+ ++.+.+.||+||+++..
T Consensus 375 -------------------~~-~~~~~l--------~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~ 426 (655)
T PRK03584 375 -------------------VP-GETHDL--------SALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCF 426 (655)
T ss_pred -------------------Cc-cccCCh--------hheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhccc
Confidence 00 001112 3899999999999999999999887 47899999999986544
Q ss_pred eeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC--CccccccCChhhhh--hh-c--cCCcccc
Q 008787 425 TVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK--TLFSGYYKNPDLTR--ES-I--IDGWFHT 497 (553)
Q Consensus 425 ~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~--~~~~gy~~~~~~~~--~~-~--~~g~~~T 497 (553)
...........+++|.|.+|++++|+| +++... .|+.|||+|+|| +++.||+++++.++ .. | .+|||+|
T Consensus 427 ~~~~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~---~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~T 502 (655)
T PRK03584 427 VGGNPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV---VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRH 502 (655)
T ss_pred ccCCCCCCcCCCccCCCcCCceeEEEC-CCCCCC---CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeec
Confidence 333222233457899999999999999 655433 578999999996 78999999987543 22 2 3688999
Q ss_pred CceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 498 GDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 498 GD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+|++|+||+|+++||.||+|++ +|++|+|.|||++|.+||.|.+|+|+|.++
T Consensus 503 GDl~~~d~dG~l~i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~ 556 (655)
T PRK03584 503 GDWIEITEHGGVVIYGRSDATLNR-GGVRIGTAEIYRQVEALPEVLDSLVIGQEW 556 (655)
T ss_pred CCeEEECCCCeEEEEeeccCeeec-CcEEECHHHHHHHHHhCCCcceEEEEeeEc
Confidence 999999999999999999999996 899999999999999999999999999875
No 51
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=9e-57 Score=477.72 Aligned_cols=456 Identities=23% Similarity=0.293 Sum_probs=362.6
Q ss_pred CCCcceeccccCCCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCC
Q 008787 20 SVGPVYRNLLASNGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAE 99 (553)
Q Consensus 20 ~~~~~~r~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~ 99 (553)
..+.+||+.+..... +...|+.+.|.++++++|+++|+.+. . ++ +.+||.||.+++.++|..|.+.|++
T Consensus 10 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~a~~~p~~~a~~~~---~--~~--~~~Ty~~l~~~~~~la~~L~~~g~~ 78 (546)
T PLN02330 10 DNEHIFRSRYPSVPV----PDKLTLPDFVLQDAELYADKVAFVEA---V--TG--KAVTYGEVVRDTRRFAKALRSLGLR 78 (546)
T ss_pred ccceeeccCCCCCCC----CCCCcHHHHHhhhhhcCCCccEEEec---C--CC--CcccHHHHHHHHHHHHHHHHHhCCC
Confidence 456788877666532 23588999999999999999999853 2 12 4799999999999999999999999
Q ss_pred CCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEe
Q 008787 100 PGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCF 179 (553)
Q Consensus 100 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (553)
+||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+... .. .++.+
T Consensus 79 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~------~~-~~i~~ 151 (546)
T PLN02330 79 KGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL------GL-PVIVL 151 (546)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc------CC-cEEEe
Confidence 999999999999999999999999999999999999999999999999999999998876655321 11 12333
Q ss_pred cCCchHHHHHHhhCCceeeeHHHHHhcccccc--cccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhc
Q 008787 180 TSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLD 257 (553)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~ 257 (553)
+... ......|.+++....... .......++++++++|||||||.||+|++||.++...+.......
T Consensus 152 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~- 220 (546)
T PLN02330 152 GEEK----------IEGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV- 220 (546)
T ss_pred cCCC----------CCCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc-
Confidence 3211 011234666554432211 122334578899999999999999999999999987654321111
Q ss_pred cccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHH
Q 008787 258 QFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALE 335 (553)
Q Consensus 258 ~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 335 (553)
.......+..+..+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|.+.++|+++..+++...
T Consensus 221 --~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---- 294 (546)
T PLN02330 221 --GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPI---- 294 (546)
T ss_pred --CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcc----
Confidence 112234568899999999999875 5567888999888876 99999999999999999999999998864210
Q ss_pred hhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEee
Q 008787 336 ELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQG 414 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~ 414 (553)
.+.+++.. .++|.+++||+++++++.+++.+.+ +.++++.
T Consensus 295 ---------------------------------~~~~~~~~------~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~ 335 (546)
T PLN02330 295 ---------------------------------VEEFDLSK------LKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEA 335 (546)
T ss_pred ---------------------------------ccccccch------heeeeEEEcCCcCCHHHHHHHHHHcCCCeEEec
Confidence 00000100 1579999999999999999999988 8999999
Q ss_pred eccccCCCceeeccCCC----ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc
Q 008787 415 YGLTETCGPTTVCFPDE----MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI 490 (553)
Q Consensus 415 YG~tE~g~~~~~~~~~~----~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~ 490 (553)
||+||++.+........ .....++|+|+|++++++++ ++++ .+++.|+.|||+|+|+.++.||+++++.+.+.+
T Consensus 336 YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~-~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 413 (546)
T PLN02330 336 YGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFID-PDTG-RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTI 413 (546)
T ss_pred ccccccccceecCCCccccccccccCccccccCCcEEEEEe-CCCC-ccCCCCCceEEEEecchhhhhhccCccchhhhc
Confidence 99999886554332111 12336899999999999999 4333 455677999999999999999999999988877
Q ss_pred -cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 491 -IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 491 -~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.+|||+|||+|++++||++++.||.+|+|++ +|++++|.+||++|.+||.|.+++|+|+++
T Consensus 414 ~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 475 (546)
T PLN02330 414 DEDGWLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVPLPD 475 (546)
T ss_pred cCCCceecccEEEEeCCCcEEEEechHHhhhc-CCEEECHHHHHHHHHhCCchheEEEEeccc
Confidence 6899999999999999999999999999997 799999999999999999999999999764
No 52
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-56 Score=479.22 Aligned_cols=457 Identities=21% Similarity=0.297 Sum_probs=362.4
Q ss_pred CCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHH
Q 008787 37 VDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWV 115 (553)
Q Consensus 37 ~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~ 115 (553)
+.....|+.++|++++..+|+++|+++. +. .++.+||.||.+++.++|.+|.+ .|+++||+|+++++|+.+++
T Consensus 5 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~---~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~ 78 (576)
T PRK05620 5 MQDVPLSLTRILEYGSTVHGDTTVTTWG---GA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL 78 (576)
T ss_pred hhcCCCcHHHHHHHHHHhCCCceEEEEc---CC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH
Confidence 3445578999999999999999999864 21 24789999999999999999986 79999999999999999999
Q ss_pred HHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCc
Q 008787 116 EAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGI 195 (553)
Q Consensus 116 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (553)
++++||+++|++++++++..+.+++.++++.+++++++++......+.+... ..+....++..+...............
T Consensus 79 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~ 157 (576)
T PRK05620 79 EVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILK-ECPCVRAVVFIGPSDADSAAAHMPEGI 157 (576)
T ss_pred HHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHh-hCccccEEEEecCcccccchhcccccc
Confidence 9999999999999999999999999999999999999999876665433322 223344444444321110011111122
Q ss_pred eeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecCh
Q 008787 196 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 275 (553)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 275 (553)
...+|.++.+... .........++++++++|||||||.||+|.++|+++.......... ....+..++++++.+|+
T Consensus 158 ~~~~~~~l~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~l~~~pl 233 (576)
T PRK05620 158 KVYSYEALLDGRS-TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTT---DSLAVTHGESFLCCVPI 233 (576)
T ss_pred ccccHHHHhhcCC-CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhh---hhcCCCCCCeEEEeCCh
Confidence 3456777775432 2222334567899999999999999999999999986554432111 01256788999999999
Q ss_pred HHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 008787 276 AHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 353 (553)
Q Consensus 276 ~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
+|.+++...+.++..|+++++.+. ++..+++.++++++|++.++|.++..++........
T Consensus 234 ~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~------------------ 295 (576)
T PRK05620 234 YHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPP------------------ 295 (576)
T ss_pred HHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCc------------------
Confidence 999998877788899999888753 899999999999999999999999887643211000
Q ss_pred HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC--
Q 008787 354 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-- 431 (553)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~-- 431 (553)
+ ..++|.+++||+++++++.+.+++.+++++++.||+||++..+.......
T Consensus 296 -------------------~--------~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~ 348 (576)
T PRK05620 296 -------------------E--------RMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGV 348 (576)
T ss_pred -------------------c--------cCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCcc
Confidence 0 02799999999999999999999988999999999999988765443221
Q ss_pred -----ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhh----------------hhhc
Q 008787 432 -----MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLT----------------RESI 490 (553)
Q Consensus 432 -----~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~----------------~~~~ 490 (553)
.....+.|++.+++++++++ + +...+..+++.|||+++|+.++.||+++++.+ ...+
T Consensus 349 ~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~ 426 (576)
T PRK05620 349 SGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRF 426 (576)
T ss_pred ccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhccc
Confidence 01124789999999999998 5 44444445678999999999999999999877 2223
Q ss_pred -cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 491 -IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 491 -~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.+|||+|||+|++++||++++.||.+|+|+. +|++++|.+||++|.+||.|.+|+|+|.++
T Consensus 427 ~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~ 488 (576)
T PRK05620 427 TADGWLRTGDVGSVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVVECAVIGYPD 488 (576)
T ss_pred ccCCcEecCceEEEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCceEEEEEeccC
Confidence 5789999999999999999999999999995 899999999999999999999999999865
No 53
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-56 Score=474.40 Aligned_cols=445 Identities=21% Similarity=0.311 Sum_probs=355.1
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|+.+++++|+++++.+. .++.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 9 ~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la 83 (539)
T PRK07008 9 PLLISSLIAHAARHAGDTEIVSRR-----VEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYG 83 (539)
T ss_pred CCCHHHHHHHHHhhCCCceEEEee-----ccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 357899999999999998888653 223356899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.+++++++++......+.+... .......++...+.... ........++
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 157 (539)
T PRK07008 84 VSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAP-QCPNVKGWVAMTDAAHL-----PAGSTPLLCY 157 (539)
T ss_pred HHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHh-hCCCceEEEEEccCCcc-----ccCCcccccH
Confidence 99999999999999999999999999999999999876554433221 22334444444332110 0001234566
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHh--hchhhhccccCCCCCCcEEEEecChHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVS--GVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
+++...... ........++++++++|||||||.||+|++||++++.... .+...+ ++..+|++++..|++|.
T Consensus 158 ~~l~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~ 231 (539)
T PRK07008 158 ETLVGAQDG-DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-----GLSARDAVLPVVPMFHV 231 (539)
T ss_pred HHHhcccCC-CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-----CCCCCceEEecCchHHh
Confidence 666544322 1223345678899999999999999999999999865332 222222 56788999999999998
Q ss_pred HHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 279 LDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 279 ~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+++...+.++..|+++++.+. +++.+++.++++++|++.++|.++..+++.....
T Consensus 232 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~----------------------- 288 (539)
T PRK07008 232 NAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA----------------------- 288 (539)
T ss_pred hhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc-----------------------
Confidence 887666777889999988754 8999999999999999999999999886532111
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-----
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE----- 431 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~----- 431 (553)
..++ +++|.++++|+++++++.+.+.+.++.++++.||+||++..+..+....
T Consensus 289 --------------~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~ 346 (539)
T PRK07008 289 --------------GLRF--------STLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQL 346 (539)
T ss_pred --------------CCCc--------ccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccC
Confidence 0011 3899999999999999999999889999999999999987655432110
Q ss_pred -----ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccC
Q 008787 432 -----MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN 506 (553)
Q Consensus 432 -----~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d 506 (553)
.....++|+|+|++++++++ +++...+.+.++.|||+++|++++.||++++. ..+.+|||+|||+|++|+|
T Consensus 347 ~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~d 422 (539)
T PRK07008 347 PLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPLVDGWFPTGDVATIDAD 422 (539)
T ss_pred CchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCChh---hhhcCCCcccCceEEEcCC
Confidence 11235789999999999999 66655555445689999999999999999883 3456899999999999999
Q ss_pred CcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 507 GVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 507 G~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|++++.||.+|+|+. +|++++|.+||+++..||.|.+++|+|.++
T Consensus 423 g~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~ 467 (539)
T PRK07008 423 GFMQITDRSKDVIKS-GGEWISSIDIENVAVAHPAVAEAACIACAH 467 (539)
T ss_pred CcEEEeecccCEEEe-CCeEEcHHHHHHHHHhCCceeEEEEEecCC
Confidence 999999999999995 899999999999999999999999999764
No 54
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=6.7e-57 Score=485.86 Aligned_cols=447 Identities=19% Similarity=0.181 Sum_probs=337.2
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.|+.+.+.. +.++++|+++. + .++..+++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||
T Consensus 87 ~n~~~~~~~---~~~~~~a~~~~---~-~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~ 159 (652)
T TIGR01217 87 LNYAENLLR---AAGTEPALLYV---D-ETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLAT 159 (652)
T ss_pred eeHHHHHhc---cCCCCeEEEEE---C-CCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 455555543 35789999886 3 3444578999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh---------hhhhccccccccCccEEEEecCCchHHHHHHhh
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV---------KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQ 192 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (553)
+++|++++|+++.++++++.+++++++++++|+.+... ..+.+.. ...+.+..++.+......... ..
T Consensus 160 ~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~--~~ 236 (652)
T TIGR01217 160 ASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVR-KELPTLRAVVHIPYLGPRETE--AP 236 (652)
T ss_pred HHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEeCCCCcccc--cc
Confidence 99999999999999999999999999999999986531 2222211 122334445554322100000 00
Q ss_pred CCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHH-HhhchhhhccccCCCCCCcEEEE
Q 008787 193 TGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATF-VSGVDLFLDQFEDKMTVDDVYLS 271 (553)
Q Consensus 193 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (553)
...+...|+++................+++++|+|||||||.||||++||.+++.. .......+ ++..+|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~ 311 (652)
T TIGR01217 237 KIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-----DLGPGDRLFY 311 (652)
T ss_pred cccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-----CCCCCcEEEE
Confidence 00123456776544211122223456789999999999999999999999986543 33332233 6788899999
Q ss_pred ecChHHHHHHHHHHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 272 FLPLAHILDRVIEEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 272 ~~p~~~~~g~~~~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
..|+.|..+. ..+.++..|++++++++ ++..+++.++++++|++..+|.++..+.+.-.
T Consensus 312 ~~~~~~~~~~-~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~--------------- 375 (652)
T TIGR01217 312 YTTTGWMMWN-WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGV--------------- 375 (652)
T ss_pred eCCcchhhhH-HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCC---------------
Confidence 9999997542 34468999999999863 67899999999999998777776655432000
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC--CceEeeeccccCCCce
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC--AFLVQGYGLTETCGPT 424 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~--~~i~~~YG~tE~g~~~ 424 (553)
.+ ....++ ++||.+++||+++++++.+++.+.++ ..+.+.||+||+++..
T Consensus 376 -------------------~~-~~~~~l--------~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~ 427 (652)
T TIGR01217 376 -------------------HP-ARTHDL--------SALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCF 427 (652)
T ss_pred -------------------Cc-cccCCh--------hheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccc
Confidence 00 011122 38999999999999999999988875 4577899999975433
Q ss_pred eeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC--CccccccCChhhhh--hh-c--cCCcccc
Q 008787 425 TVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK--TLFSGYYKNPDLTR--ES-I--IDGWFHT 497 (553)
Q Consensus 425 ~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~--~~~~gy~~~~~~~~--~~-~--~~g~~~T 497 (553)
....+......+++|.|.+|++++++| +++... .|+.|||+++|| .++.||+++++.++ +. | .+|||+|
T Consensus 428 ~~~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~---~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~t 503 (652)
T TIGR01217 428 AGANPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV---TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRH 503 (652)
T ss_pred cCCCCCCCCcCCccCCCcCCCceEEEC-CCCCCC---CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEc
Confidence 322222233347889999999999999 665543 378999999996 58899999998654 22 3 2689999
Q ss_pred CceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 498 GDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 498 GD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+|++|+||+|+++||.||+|++ +|++|+|.|||++|.+||+|.+|+|+|+++
T Consensus 504 GDlg~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaavvg~~~ 557 (652)
T TIGR01217 504 GDWITLTPRGGIVIHGRSDSTLNP-QGVRMGSAEIYNAVERLDEVRESLCIGQEQ 557 (652)
T ss_pred CCcEEECCCCcEEEEecccCeEec-CCEEcCHHHHHHHHHhCCCcceEEEEeeec
Confidence 999999999999999999999996 899999999999999999999999999875
No 55
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-56 Score=474.67 Aligned_cols=436 Identities=25% Similarity=0.282 Sum_probs=363.0
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
-+|+.+.|..+++++|+++|+.+. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 16 ~~n~~~~~~~~a~~~~~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a 86 (542)
T PRK07786 16 RQNWVNQLARHALMQPDAPALRFL---G------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLA 86 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 588999999999999999999864 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.+++++++++......+.. .....+....++.+++... ....++
T Consensus 87 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~ 155 (542)
T PRK07786 87 ANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATA-VRDIVPLLSTVVVAGGSSD----------DSVLGY 155 (542)
T ss_pred HHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHH-hhhccCccceEEEecCCCc----------ccccCH
Confidence 99999999999999999999999999999999998876554422 2222234444555443211 123456
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCC-CCCcEEEEecChHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM-TVDDVYLSFLPLAHIL 279 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~ 279 (553)
+++...... .........+++++++|||||||.||+|.+||+++...+......+ ++ ..++++++..|++|.+
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~ 229 (542)
T PRK07786 156 EDLLAEAGP-AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-----GADINSDVGFVGVPLFHIA 229 (542)
T ss_pred HHHhhccCC-CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-----CCCCCCceEEEecchHHHH
Confidence 666543322 2223345667899999999999999999999999988877655544 44 5678999999999999
Q ss_pred HHHHHHHHHHcCcEEEEec---CChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 280 DRVIEEYFFRRGASVGYYH---GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 280 g~~~~~~~l~~g~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
|+...+.++..|+++++.+ .++..+++.++++++|.++++|.++..+........
T Consensus 230 g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~---------------------- 287 (542)
T PRK07786 230 GIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP---------------------- 287 (542)
T ss_pred HHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc----------------------
Confidence 9877888899999998865 289999999999999999999999999865211000
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCC-ccc
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE-MCM 434 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~-~~~ 434 (553)
. ..++|.+++||+++++++.+++++.+ +.++++.||+||++.+.+...... ...
T Consensus 288 -------------~-----------~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~ 343 (542)
T PRK07786 288 -------------R-----------DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRK 343 (542)
T ss_pred -------------c-----------CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCccccccc
Confidence 0 01689999999999999999999988 788999999999987766543322 234
Q ss_pred cCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEec
Q 008787 435 VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDR 514 (553)
Q Consensus 435 ~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR 514 (553)
..++|+|++++.+++++ +++. +++.|+.|||+++|+.++.||+++++.+...|.+|||+|||+|++++||++++.||
T Consensus 344 ~~~~G~~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR 420 (542)
T PRK07786 344 LGSVGKVIPTVAARVVD-ENMN--DVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDR 420 (542)
T ss_pred CCCccccCCCceEEEEC-CCCC--CCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEec
Confidence 47899999999999999 5543 45567899999999999999999999999999999999999999999999999999
Q ss_pred ccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 515 KKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 515 ~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.+|+|++ +|++++|.+||++|.+||.|.+|+|+|.++
T Consensus 421 ~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 457 (542)
T PRK07786 421 KKDMIIS-GGENIYCAEVENVLASHPDIVEVAVIGRAD 457 (542)
T ss_pred ccceEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccC
Confidence 9999996 899999999999999999999999999753
No 56
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=3.9e-56 Score=473.34 Aligned_cols=437 Identities=22% Similarity=0.293 Sum_probs=355.1
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.++.++|++.++++|+++|+++. ++ +.+||+||.+++.++|++|++.|+++||+|+++++|+++++++++||
T Consensus 23 ~~l~~~~~~~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~ 94 (547)
T PRK06087 23 ASLADYWQQTARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLAC 94 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 57999999999999999999854 33 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh-----hhhhccccccccCccEEEEecCCchHHHHHHhhCCce
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIK 196 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (553)
+++|++++|+++..+.+++.++++.+++++++++.... ..+... .........++.++.... ...
T Consensus 95 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~ 164 (547)
T PRK06087 95 LKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPL-QNQLPQLQQIVGVDKLAP---------ATS 164 (547)
T ss_pred HHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHH-HhhCCCCcEEEEeCCcCC---------CcC
Confidence 99999999999999999999999999999999976321 111111 112233334444443211 011
Q ss_pred eeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH
Q 008787 197 PYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
..++.++....... ........+++++|+|||||||.||+|.+||.++......+...+ ++..++++++..|++
T Consensus 165 ~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~ 238 (547)
T PRK06087 165 SLSLSQIIADYEPL-TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-----NLTWQDVFMMPAPLG 238 (547)
T ss_pred ccCHHHHhccCCcc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeEEEecchH
Confidence 22455554432211 122234678999999999999999999999999988777655544 678899999999999
Q ss_pred HHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 277 HILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 277 ~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
|.+|+.. .+.+++.|+++++.+. ++..+++.++++++++++++|+.+..+++......
T Consensus 239 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~-------------------- 298 (547)
T PRK06087 239 HATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQP-------------------- 298 (547)
T ss_pred HHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCC--------------------
Confidence 9999865 5667888999988876 99999999999999999998888777654221100
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-cc
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-MC 433 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~-~~ 433 (553)
..++++|.+++||+++++++.+.+.+. ++++++.||+||++.+........ ..
T Consensus 299 -------------------------~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~ 352 (547)
T PRK06087 299 -------------------------ADLSALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSR 352 (547)
T ss_pred -------------------------CCCCCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhh
Confidence 011489999999999999999988775 999999999999988766544322 22
Q ss_pred ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEE
Q 008787 434 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKII 512 (553)
Q Consensus 434 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~ 512 (553)
...++|+|++++.++++| +++. +++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||+|+++++|++++.
T Consensus 353 ~~~~~G~~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~ 429 (547)
T PRK06087 353 FMHTDGYAAAGVEIKVVD-EARK--TLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKIT 429 (547)
T ss_pred cCCcCCccCCCceEEEEc-CCCC--CCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEE
Confidence 235789999999999998 5553 45677899999999999999999999998887 6899999999999999999999
Q ss_pred ecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 513 DRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 513 GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||.+|+|+. +|++++|.+||++|..+|+|.+++|+|.++
T Consensus 430 GR~~d~i~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~ 468 (547)
T PRK06087 430 GRKKDIIVR-GGENISSREVEDILLQHPKIHDACVVAMPD 468 (547)
T ss_pred ecchhhhhc-CCEEECHHHHHHHHHhCCCeeEEEEEecCC
Confidence 999999996 899999999999999999999999999764
No 57
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-56 Score=473.41 Aligned_cols=438 Identities=24% Similarity=0.319 Sum_probs=354.7
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
...|+.+.|...++++|+++|+++. + +++||.||.+++.++|..|.+.|+++|++|+++++|+++++++++
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 75 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWG----D-----RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMF 75 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEEC----C-----ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999863 2 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
||+++|++++++++..+.+++.++++.++++.++++........... ........++.+.... ...+
T Consensus 76 A~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~ 142 (528)
T PRK07470 76 AAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVR-AASPDLTHVVAIGGAR------------AGLD 142 (528)
T ss_pred HHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHH-hhCCcCceEEEeCCCc------------cccc
Confidence 99999999999999999999999999999999999987654432211 1122333444443321 1234
Q ss_pred HHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHH
Q 008787 200 WDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 279 (553)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 279 (553)
+.+++..............++++++++|||||||.||+|.++|.++...+....... ..+....|+++..+|++|.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~ 219 (528)
T PRK07470 143 YEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL---MPGTTEQDASLVVAPLSHGA 219 (528)
T ss_pred HHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh---ccCCCcccEEEEeccchhHH
Confidence 555554332222233445678999999999999999999999999876544322111 11456788999999999999
Q ss_pred HHHHHHHHHHcCcEEEEecC---ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 280 DRVIEEYFFRRGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 280 g~~~~~~~l~~g~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
++...+ .+..|+++++.+. +++.+++.++++++|++.++|.+++.+.+....
T Consensus 220 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------ 274 (528)
T PRK07470 220 GIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAV------------------------ 274 (528)
T ss_pred HHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCc------------------------
Confidence 986544 5667777766643 899999999999999999999999887642110
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCC------
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD------ 430 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~------ 430 (553)
... ..+++|.+++||++++++..+++.+.++.++++.||+||+++.++.....
T Consensus 275 -------------~~~--------~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 333 (528)
T PRK07470 275 -------------DRY--------DHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAED 333 (528)
T ss_pred -------------CCC--------CCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccc
Confidence 000 11489999999999999999999888899999999999998766644321
Q ss_pred -CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcE
Q 008787 431 -EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVV 509 (553)
Q Consensus 431 -~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l 509 (553)
.....+++|.|++++++++++ +++. +++.|+.|||+++|+.++.||+++++.+.+.|.+|||+|||+|++++||++
T Consensus 334 ~~~~~~~~~G~~~~g~~~~i~d-~~~~--~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l 410 (528)
T PRK07470 334 GPDARIGTCGFERTGMEVQIQD-DEGR--ELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFL 410 (528)
T ss_pred cccceeeccCcccCCcEEEEEC-CCCC--CCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEccCCeE
Confidence 112336889999999999999 5544 455778999999999999999999999998889999999999999999999
Q ss_pred EEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 510 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 510 ~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
++.||.+|+|++ +|++++|.+||++|.++|.|.+|+|+|.++
T Consensus 411 ~~~GR~dd~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~ 452 (528)
T PRK07470 411 YITGRASDMYIS-GGSNVYPREIEEKLLTHPAVSEVAVLGVPD 452 (528)
T ss_pred EEeCCccceEEe-CCEEECHHHHHHHHHhCCCceEEEEEeccC
Confidence 999999999996 899999999999999999999999999865
No 58
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-56 Score=471.24 Aligned_cols=440 Identities=25% Similarity=0.315 Sum_probs=361.9
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|...++++|+++|+++. + +.+||.||.+.+.++|..|.+.|+++||+|+++++|+++++++++|
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a 80 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLA 80 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 477999999999999999999875 3 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.+++++++++......+.+.................. .........+
T Consensus 81 ~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 152 (523)
T PRK08316 81 CARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGG--------REAPGGWLDF 152 (523)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccc--------cccccchhhH
Confidence 99999999999999999999999999999999999887665543321111000000000000 0001123445
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
+++...... .........+++++++|||||||.||+|.+||.+++.........+ ++..++++++.+|++|.++
T Consensus 153 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g 226 (523)
T PRK08316 153 ADWAEAGSV-AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-----DMSADDIPLHALPLYHCAQ 226 (523)
T ss_pred HHHHhcCCC-ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCCceEEEccCCchhhh
Confidence 554443221 1233445778999999999999999999999999988877665555 6788999999999999999
Q ss_pred HHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 281 RVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 281 ~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
+.. +..++..|+++++.+. +++.+++.++++++|++.++|.++..+.+...
T Consensus 227 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------------- 279 (523)
T PRK08316 227 LDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPD--------------------------- 279 (523)
T ss_pred HHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcc---------------------------
Confidence 875 4456889999999865 99999999999999999999999988764211
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCC-ccccC
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE-MCMVG 436 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~-~~~~~ 436 (553)
....++ +++|.+++||++++.++.+.+++.+ +.++++.||+||++.++....... ....+
T Consensus 280 ----------~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 341 (523)
T PRK08316 280 ----------FDTRDL--------SSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPG 341 (523)
T ss_pred ----------cccCCc--------ccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccC
Confidence 001111 3899999999999999999999987 789999999999998776654332 23447
Q ss_pred ccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEeccc
Q 008787 437 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKK 516 (553)
Q Consensus 437 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~ 516 (553)
++|++++++++++++ +++. +++.|+.|||+++|++++.||+++++.+++.|.+|||+|||+|++++||.+++.||.+
T Consensus 342 ~~G~~~~~~~~~i~~-~~~~--~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~ 418 (523)
T PRK08316 342 SAGRPVLNVETRVVD-DDGN--DVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKK 418 (523)
T ss_pred CcccCCCCcEEEEEc-CCCC--CCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccc
Confidence 899999999999999 5553 4556789999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 517 NLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 517 d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++ +|++++|.+||+.|.++|+|.+++|+|.++
T Consensus 419 ~~i~~-~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~ 453 (523)
T PRK08316 419 DMIKT-GGENVASREVEEALYTHPAVAEVAVIGLPD 453 (523)
T ss_pred cEEEe-CCeEECHHHHHHHHHhCCChheEeEecccC
Confidence 99997 899999999999999999999999999764
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5.5e-56 Score=473.14 Aligned_cols=452 Identities=23% Similarity=0.317 Sum_probs=351.9
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~-gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..++.+.|.++++++|+++|+++. + +.+||.||.++++++|.+|.+. |+++||+|+++++|++++++++|
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~l 93 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNL----G-----VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVF 93 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 358999999999999999999753 3 4899999999999999999985 99999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEec--CCchHHHHH--------
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFT--SLTAEQKEM-------- 189 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------- 189 (553)
||+++|++++++++..+.+++.++++.++++++++++.....+...... .....++... +........
T Consensus 94 a~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
T PRK12492 94 GALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPD--TGIEYLIEAKMGDLLPAAKGWLVNTVVDK 171 (562)
T ss_pred HHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhc--cCceEEEeechhhccccccchhccccccc
Confidence 9999999999999999999999999999999999886543333221111 0111111100 000000000
Q ss_pred -----HhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccC---
Q 008787 190 -----AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFED--- 261 (553)
Q Consensus 190 -----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~--- 261 (553)
.........+|+++............+...+++++|+|||||||.||+|+++|+++...+......+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~ 251 (562)
T PRK12492 172 VKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQ 251 (562)
T ss_pred ccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccc
Confidence 000001224555555433222222334567899999999999999999999999998776655443311100
Q ss_pred -CCCC-CcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHh
Q 008787 262 -KMTV-DDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEE 336 (553)
Q Consensus 262 -~~~~-~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 336 (553)
.... .+++++.+|++|.+++.. ++..+..|.+.++... ++..++..++++++|++.++|+++..|++...
T Consensus 252 ~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----- 326 (562)
T PRK12492 252 PLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPG----- 326 (562)
T ss_pred ccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcC-----
Confidence 0222 357789999999999875 4456778887766543 88999999999999999999999988764210
Q ss_pred hchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeec
Q 008787 337 LRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYG 416 (553)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG 416 (553)
...+++ +++|.+++||+++++++.+.|++.+++++++.||
T Consensus 327 --------------------------------~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG 366 (562)
T PRK12492 327 --------------------------------FKDLDF--------SALKLTNSGGTALVKATAERWEQLTGCTIVEGYG 366 (562)
T ss_pred --------------------------------cccccc--------cceeEEEeccccCCHHHHHHHHHHhCCceeeccC
Confidence 000111 3899999999999999999999988999999999
Q ss_pred cccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCcc
Q 008787 417 LTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWF 495 (553)
Q Consensus 417 ~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~ 495 (553)
+||++.+++..........+++|+|+++++++|++ +++ .+++.|+.|||+|+|+.++.||+++++.+.+.| .+|||
T Consensus 367 ~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~ 443 (562)
T PRK12492 367 LTETSPVASTNPYGELARLGTVGIPVPGTALKVID-DDG--NELPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWF 443 (562)
T ss_pred ccccCceeeecCCcccccCCccceecCCCEEEEEC-CCC--CCCCCCCceEEEEeCCccccccccCchhhhhcccCCCce
Confidence 99998877665544333447899999999999999 554 345677899999999999999999999998888 68999
Q ss_pred ccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 496 HTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 496 ~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|||+|+++++|++++.||.+|+|++ +|++++|.+||+.|.+||.|.+++|+|.++
T Consensus 444 ~TGD~g~~~~~G~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 499 (562)
T PRK12492 444 KTGDIAVIDPDGFVRIVDRKKDLIIV-SGFNVYPNEIEDVVMAHPKVANCAAIGVPD 499 (562)
T ss_pred ecCcEEEECCCCeEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccC
Confidence 99999999999999999999999997 799999999999999999999999999764
No 60
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-55 Score=478.04 Aligned_cols=450 Identities=18% Similarity=0.153 Sum_probs=337.9
Q ss_pred ccH-HHHHHHHHHcCCCCCceeeecccCCC--CCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 42 NTA-WDIFSMSVQKYPGNRMLGWRPFVDGK--FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 42 ~~l-~~~l~~~a~~~p~~~al~~~~~~d~~--~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
.|+ ..+|.++++++|+++|+++. +.. ++..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~ 250 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIY 250 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHH
Confidence 444 44666666678999999986 331 234578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhh-----hhccccccccCccEEEEecCCchHHHHHHhhC
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKE-----LLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQT 193 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (553)
|||+++|++++|+++..+++++.+++++++++++|+.+..... .......... ..++++....... . ...
T Consensus 251 LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~--~~~iv~~~~~~~~-~--~~~ 325 (728)
T PLN03052 251 LAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA--PKAIVLPADGKSV-R--VKL 325 (728)
T ss_pred HHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC--CcEEEEeCCCCcc-c--ccc
Confidence 9999999999999999999999999999999999998753210 0000000001 1222222111000 0 000
Q ss_pred CceeeeHHHHHhcccc----cccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEE
Q 008787 194 GIKPYSWDEFLHLGKV----NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVY 269 (553)
Q Consensus 194 ~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 269 (553)
.....+|++++..... ..........+++++|+|||||||.||+|+++|.+++.........+ ++..+|++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-----~l~~~d~~ 400 (728)
T PLN03052 326 REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-----DIRKGDIV 400 (728)
T ss_pred ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-----CCCCCcEE
Confidence 0123457776643211 11111223568999999999999999999999998876655443333 67889999
Q ss_pred EEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 008787 270 LSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDA 347 (553)
Q Consensus 270 ~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (553)
++..|+.|..+....+.++..|+++++.++ ++..+++.++++++|++.++|+++..|.+.-
T Consensus 401 ~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~----------------- 463 (728)
T PLN03052 401 CWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTN----------------- 463 (728)
T ss_pred EECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcC-----------------
Confidence 999999999998767788999999999886 5678999999999999999999998875410
Q ss_pred HHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC-CceEeeeccccCCCceee
Q 008787 348 LYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTV 426 (553)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~~YG~tE~g~~~~~ 426 (553)
....+++ ++||.+++||++++++...++.+.++ .++.+.||+||+++....
T Consensus 464 --------------------~~~~~dl--------ssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~ 515 (728)
T PLN03052 464 --------------------CMAGLDW--------SSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVT 515 (728)
T ss_pred --------------------CcccCCh--------hheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCccccc
Confidence 0011223 38999999999999999888887765 579999999999865443
Q ss_pred ccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCc--cccccCChhhhhhhcc-----CC--cccc
Q 008787 427 CFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTL--FSGYYKNPDLTRESII-----DG--WFHT 497 (553)
Q Consensus 427 ~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~--~~gy~~~~~~~~~~~~-----~g--~~~T 497 (553)
.........+++|.|.+|++++|+| +++..++.+..+.|||+++++.. ..+|+++. .....|. .| ||+|
T Consensus 516 ~~~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~t 593 (728)
T PLN03052 516 GSLLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRH 593 (728)
T ss_pred CCCCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEec
Confidence 3222233447899999999999999 66654433222469999986532 34566553 2222231 23 8999
Q ss_pred CceEEEccCCcEEEEecccCceecCCceeecchhHHHHHh-cCcCcceEEEEecCC
Q 008787 498 GDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYC-VAPIIEDVSISYSSV 552 (553)
Q Consensus 498 GD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~-~~p~V~~~~V~g~~~ 552 (553)
||+|++|+||+++++||.||+|++ +|++|+|.|||++|. .||+|.||+|+|+++
T Consensus 594 GDl~~~d~dG~l~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d 648 (728)
T PLN03052 594 GDIFERTSGGYYRAHGRADDTMNL-GGIKVSSVEIERVCNAADESVLETAAIGVPP 648 (728)
T ss_pred CceEEECCCCeEEEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcceEEEEeeec
Confidence 999999999999999999999997 899999999999995 899999999999875
No 61
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-55 Score=464.51 Aligned_cols=427 Identities=22% Similarity=0.308 Sum_probs=350.1
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
|.++.++|.++++++|+++|+++. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~----~-----~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVYR----D-----QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFA 71 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEEC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 578899999999999999999864 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++.++++.+++++++++.+...... . ....+.++.... ..+
T Consensus 72 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-~-------~~~~~~~~~~~~-------------~~~ 130 (497)
T PRK06145 72 ASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-L-------ETPKIVIDAAAQ-------------ADS 130 (497)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhh-c-------ccceEEecCccc-------------chh
Confidence 9999999999999999999999999999999999876543221 0 011222222110 011
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
..+.... ..........++++++++|||||||.||+|++||.++...+......+ ++..+++++...|++|.++
T Consensus 131 ~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~ 204 (497)
T PRK06145 131 RRLAQGG-LEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-----GLTASERLLVVGPLYHVGA 204 (497)
T ss_pred HHHhccC-CCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCCcEEEEecCchhHhH
Confidence 1111111 111112234678999999999999999999999999986655443333 6788899999999999998
Q ss_pred HHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 281 RVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 281 ~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
+.. .+.+++.|+++++.+. ++..+++.++++++|++.++|+++..++.....
T Consensus 205 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~-------------------------- 258 (497)
T PRK06145 205 FDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDR-------------------------- 258 (497)
T ss_pred HHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCc--------------------------
Confidence 865 4567889999888776 999999999999999999999999888642110
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCC-CccccC
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD-EMCMVG 436 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~-~~~~~~ 436 (553)
...++ +++|.+++||+++++++.+++.+.+ +.++++.||+||++...+..... .....+
T Consensus 259 -----------~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~ 319 (497)
T PRK06145 259 -----------DRFDL--------DSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIG 319 (497)
T ss_pred -----------ccccc--------ccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCC
Confidence 00111 3799999999999999999999888 67899999999998865543322 222347
Q ss_pred ccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEeccc
Q 008787 437 TAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKK 516 (553)
Q Consensus 437 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~ 516 (553)
++|.|++++++++.+ +++. +++.++.|||+++|++++.||+++++.+.+.|.++||+|||+|++++||+++++||.+
T Consensus 320 ~~G~~~~~~~~~i~~-~~~~--~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~ 396 (497)
T PRK06145 320 STGRALAHVEIRIAD-GAGR--WLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKK 396 (497)
T ss_pred CcccCCCCceEEEEC-CCCC--CCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcCCCcEEEecccc
Confidence 899999999999999 5543 4556789999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 517 NLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 517 d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++ +|++++|.+||++|.+||+|.+++|+|.++
T Consensus 397 ~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~ 431 (497)
T PRK06145 397 DMIIS-GGENIASSEVERVIYELPEVAEAAVIGVHD 431 (497)
T ss_pred ceEEe-CCeEECHHHHHHHHHhCCCeeEEEEEecCC
Confidence 99996 899999999999999999999999998764
No 62
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-56 Score=486.25 Aligned_cols=412 Identities=20% Similarity=0.214 Sum_probs=337.9
Q ss_pred ccHHHHHHHHHHc--CCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 42 NTAWDIFSMSVQK--YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 42 ~~l~~~l~~~a~~--~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
.|+.++|.++++. +||++|++.. ..+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 73 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLL 73 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4788999988886 7999999742 269999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
||+++|++++|++|.++.+++.++++.++++++|++......+... .++ .
T Consensus 74 a~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---------~~~---------------------~ 123 (705)
T PRK06060 74 ACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS---------RVA---------------------E 123 (705)
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc---------ccc---------------------h
Confidence 9999999999999999999999999999999999987654332110 000 0
Q ss_pred HHHHHhcc-cccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhch-hhhccccCCCCCCcEEEEecChHH
Q 008787 200 WDEFLHLG-KVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVD-LFLDQFEDKMTVDDVYLSFLPLAH 277 (553)
Q Consensus 200 ~~~l~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~ 277 (553)
...+.... ...+....+..++++++++|||||||.||+|.++|+++...+..+. ..+ .+...+++++..|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~ 198 (705)
T PRK06060 124 AAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-----RLTPEDTGLCSARMYF 198 (705)
T ss_pred hhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-----CCCCcceeEEeccchh
Confidence 00111100 0011112234568899999999999999999999999987765543 223 5678899999999999
Q ss_pred HHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 278 ILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 278 ~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
.+++.. ++.++..|+++++.+. ++..+...++++++|+++++|+++.++++....
T Consensus 199 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---------------------- 256 (705)
T PRK06060 199 AYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP---------------------- 256 (705)
T ss_pred hcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc----------------------
Confidence 888754 5667899999998764 788899999999999999999999888642110
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCCcc
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMC 433 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~~~ 433 (553)
...+++|.+++||+++++++.+.+.+.+ +.++++.||+||++..+...... ..
T Consensus 257 -------------------------~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-~~ 310 (705)
T PRK06060 257 -------------------------DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVD-EW 310 (705)
T ss_pred -------------------------ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCC-CC
Confidence 0013899999999999999999999988 58899999999998665443322 22
Q ss_pred ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEe
Q 008787 434 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIID 513 (553)
Q Consensus 434 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~G 513 (553)
..+++|+|++++++++++ +++ .+++.|+.|||+|+|+.++.||+++++.+.. .+|||+|||+|++++||++++.|
T Consensus 311 ~~~~iG~p~~~~~v~i~d-~~g--~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~--~~~~~~TGDl~~~~~dG~l~~~G 385 (705)
T PRK06060 311 RLGTLGRVLPPYEIRVVA-PDG--TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVA--NEGWLDTRDRVCIDSDGWVTYRC 385 (705)
T ss_pred CcCcccccCCCcEEEEEC-CCC--CCCCCCCceEEEEccchhhhhhhCCCccccc--CCCcEECCeeEEECCCceEEEec
Confidence 347899999999999999 554 3456779999999999999999999876432 57899999999999999999999
Q ss_pred cccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 514 RKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 514 R~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|.+|+|++ +|++|+|.+||++|.+||.|.+|+|+|.++
T Consensus 386 R~dd~ik~-~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~ 423 (705)
T PRK06060 386 RADDTEVI-GGVNVDPREVERLIIEDEAVAEAAVVAVRE 423 (705)
T ss_pred ccCceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeecC
Confidence 99999997 799999999999999999999999999864
No 63
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.6e-56 Score=487.36 Aligned_cols=429 Identities=21% Similarity=0.299 Sum_probs=337.1
Q ss_pred cccHHHHHHHHHHcCCC-CCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPG-NRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~-~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..++.+.|.++++++|+ ++|+.+. + ++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~~---~-----~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~l 273 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIEDV---N-----FTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIF 273 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEcC---C-----CCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHH
Confidence 47889999999999998 5777531 1 25799999999999999999987 5999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc-cccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS-PDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
||+++|++++|+++.++.+++.+++++++++++|++.+..+.... .......... ++.+.+... ..
T Consensus 274 A~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~------------~~ 340 (718)
T PRK08043 274 GASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVR-WVYLEDLKD------------DV 340 (718)
T ss_pred HHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhcccc-EEEhhhhhh------------hc
Confidence 999999999999999999999999999999999998775442110 0111111111 222221100 00
Q ss_pred eHHHH--H-hcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecCh
Q 008787 199 SWDEF--L-HLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 275 (553)
Q Consensus 199 ~~~~l--~-~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 275 (553)
.+... . ..............++++++++|||||||.||+|++||.++...+......+ ++..+|++++.+|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~Pl 415 (718)
T PRK08043 341 TTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-----DFTPNDRFMSALPL 415 (718)
T ss_pred chhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-----CCCccCeEEEcCcc
Confidence 11000 0 0000001111234678999999999999999999999999998877665554 67889999999999
Q ss_pred HHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 008787 276 AHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYK 352 (553)
Q Consensus 276 ~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
+|.+|+.. ++.++..|+++++.+. ++..+.+.+.++++|++.++|+++..+.+..
T Consensus 416 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~---------------------- 473 (718)
T PRK08043 416 FHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA---------------------- 473 (718)
T ss_pred hhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc----------------------
Confidence 99999875 5678999999998764 6778899999999999999999987654310
Q ss_pred HHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCc
Q 008787 353 LAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEM 432 (553)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~ 432 (553)
+..++ ++||.+++||+++++++.+.+++.+|+++++.||+||++...+...+..
T Consensus 474 -----------------~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~- 527 (718)
T PRK08043 474 -----------------NPYDF--------ARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMA- 527 (718)
T ss_pred -----------------Ccccc--------cceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcc-
Confidence 00011 3899999999999999999999989999999999999987766543322
Q ss_pred cccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccC--Chhh-------hhhh-ccCCccccCceEE
Q 008787 433 CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYK--NPDL-------TRES-IIDGWFHTGDIGQ 502 (553)
Q Consensus 433 ~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~--~~~~-------~~~~-~~~g~~~TGD~g~ 502 (553)
...+++|+|+||+++++++ +++ .++.|||+++|++++.||++ +++. +.+. +.+|||+|||+|+
T Consensus 528 ~~~~svG~p~pg~~~~i~d-~~~------~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~ 600 (718)
T PRK08043 528 AKPGTVGRILPGMDARLLS-VPG------IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVR 600 (718)
T ss_pred cCCCCCCCcCCCCeeEEec-CCC------CCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEE
Confidence 3458999999999999998 432 23569999999999999998 3442 2222 2579999999999
Q ss_pred EccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 503 ILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 503 ~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|+||+++++||.+|+|++ +|++|+|.|||+++.+|+.+.+++|+|.++
T Consensus 601 ~d~dG~l~i~GR~~d~I~~-~G~~V~p~eIE~~l~~~~~~~~~avv~~~~ 649 (718)
T PRK08043 601 FDEQGFVQIQGRAKRFAKI-AGEMVSLEMVEQLALGVSPDKQHATAIKSD 649 (718)
T ss_pred EcCCCcEEEEecCCCeeEe-CcEEcCHHHHHHHHHhCCccceEEEEEccC
Confidence 9999999999999999997 799999999999999999898999998764
No 64
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.4e-55 Score=470.64 Aligned_cols=445 Identities=28% Similarity=0.373 Sum_probs=358.2
Q ss_pred CCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHH
Q 008787 38 DSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEA 117 (553)
Q Consensus 38 ~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~ 117 (553)
+....++.+.|.+.++++|+++|+++. ++. +.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++
T Consensus 12 ~~~~~~l~~~l~~~~~~~~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~ 84 (559)
T PRK08315 12 PLLEQTIGQLLDRTAARYPDREALVYR---DQG----LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLT 84 (559)
T ss_pred ChhhccHHHHHHHHHHHCCCCeEEEEc---CCC----eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHH
Confidence 345578999999999999999999875 332 5799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh-----hhhccccc------------cccCccEEEEec
Q 008787 118 MEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK-----ELLSPDCR------------SAQRLRVMVCFT 180 (553)
Q Consensus 118 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~~ 180 (553)
+|||+++|++++|+++..+.+++..+++.++++++++++.... .+.+...+ ..+....++.++
T Consensus 85 ~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (559)
T PRK08315 85 QFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLG 164 (559)
T ss_pred HHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeec
Confidence 9999999999999999999999999999999999999875321 11110000 001222333333
Q ss_pred CCchHHHHHHhhCCceeeeHHHHHhccccc-----ccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhh
Q 008787 181 SLTAEQKEMAVQTGIKPYSWDEFLHLGKVN-----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLF 255 (553)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~ 255 (553)
... ......+.++....... .........+++++++|||||||.||+|.+||+++...+......
T Consensus 165 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~ 234 (559)
T PRK08315 165 DEK----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEA 234 (559)
T ss_pred ccC----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHh
Confidence 211 11123444444322110 111223467889999999999999999999999999888776665
Q ss_pred hccccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHH
Q 008787 256 LDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKK 332 (553)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~ 332 (553)
+ ++..+++++...|++|.+|+.. .+.++..|+++++... ++..+++.++++++|+++++|.++..++.....
T Consensus 235 ~-----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~ 309 (559)
T PRK08315 235 M-----KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDF 309 (559)
T ss_pred c-----CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCccc
Confidence 5 7788999999999999999876 5567888999885543 899999999999999999999999877532110
Q ss_pred HHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCc-e
Q 008787 333 ALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAF-L 411 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~-i 411 (553)
+...+ +++|.+++||+++++++.+.+.+.++.. +
T Consensus 310 -------------------------------------~~~~~--------~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l 344 (559)
T PRK08315 310 -------------------------------------ARFDL--------SSLRTGIMAGSPCPIEVMKRVIDKMHMSEV 344 (559)
T ss_pred -------------------------------------CCCCc--------hhhheeEecCCCCCHHHHHHHHHHcCCcce
Confidence 00111 3899999999999999999999888764 9
Q ss_pred EeeeccccCCCceeeccCCC--ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhh
Q 008787 412 VQGYGLTETCGPTTVCFPDE--MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRES 489 (553)
Q Consensus 412 ~~~YG~tE~g~~~~~~~~~~--~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~ 489 (553)
++.||+||++.+++...... .....++|+|+|+++++++| ++.+ .+++.|+.|||+|+|+.++.||+++++.++..
T Consensus 345 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~-~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~ 422 (559)
T PRK08315 345 TIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVD-PETG-ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEA 422 (559)
T ss_pred eEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEc-CccC-CcCCCCCceEEEEECchhhhhhcCChhHHhhc
Confidence 99999999988766543322 23457899999999999999 5422 44567799999999999999999999999888
Q ss_pred c-cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 490 I-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 490 ~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+ .++||+|||+|++++||+++++||.+|+|++ +|++++|.+||++|.++|+|.+++|+++++
T Consensus 423 ~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 485 (559)
T PRK08315 423 IDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHPKIQDVQVVGVPD 485 (559)
T ss_pred CCCCCCEEccceEEEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCCCceEEEEEecCC
Confidence 8 7899999999999999999999999999996 899999999999999999999999999765
No 65
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.2e-55 Score=466.72 Aligned_cols=438 Identities=23% Similarity=0.260 Sum_probs=360.1
Q ss_pred cHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHH
Q 008787 43 TAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACN 122 (553)
Q Consensus 43 ~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~ 122 (553)
++.+.|+.+++++|+++|+.+. + +++||+||.+++.++|++|++.|+.+|++|+++++|+.++++++|||+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~ 71 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAA 71 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3678999999999999999864 2 479999999999999999999999999999999999999999999999
Q ss_pred hcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHH
Q 008787 123 ALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDE 202 (553)
Q Consensus 123 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (553)
++|++++|+++..+.+++..+++.+++++++++......+...... .+....++.+++..... ........|++
T Consensus 72 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 145 (515)
T TIGR03098 72 LAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPG-CHDLRTLILVGEPAHAS-----EGGGESPSWPK 145 (515)
T ss_pred hcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhc-ccccceEEEecCccccc-----CCccccccHHH
Confidence 9999999999999999999999999999999988765544333222 23344455554332100 00122345666
Q ss_pred HHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHH
Q 008787 203 FLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRV 282 (553)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 282 (553)
+...... ....+...+++++++|||||||.||+|.+||.++...+......+ .+..+|++++.+|++|.+|+.
T Consensus 146 ~~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~ 218 (515)
T TIGR03098 146 LLALGDA--DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-----ENRPDDRLLAVLPLSFDYGFN 218 (515)
T ss_pred hhccccc--cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-----CCCcccEEEEECchhhHhHHH
Confidence 5543221 122334567899999999999999999999999998887766555 677889999999999999988
Q ss_pred HHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCC
Q 008787 283 IEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYK 361 (553)
Q Consensus 283 ~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (553)
..+.++..|+++++.+. +++.+++.++++++|++.++|+++..|.+....
T Consensus 219 ~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----------------------------- 269 (515)
T TIGR03098 219 QLTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP----------------------------- 269 (515)
T ss_pred HHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-----------------------------
Confidence 78888999999998876 899999999999999999999999887541000
Q ss_pred cCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCCccccCccCC
Q 008787 362 QREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGP 440 (553)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~ 440 (553)
. ...+++|.+++||+++++++.+.+++.+ +..+++.||+||++..............+++|+
T Consensus 270 ---------~--------~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~ 332 (515)
T TIGR03098 270 ---------E--------SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGK 332 (515)
T ss_pred ---------C--------CCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcce
Confidence 0 0113899999999999999999999988 788999999999886554433333344579999
Q ss_pred CCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc------------CCccccCceEEEccCCc
Q 008787 441 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII------------DGWFHTGDIGQILPNGV 508 (553)
Q Consensus 441 ~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGD~g~~~~dG~ 508 (553)
|++++++++++ +++. +++.++.|||+++|+.++.||+++++.+...+. ++|++|||+|++++||+
T Consensus 333 ~~~~~~~~i~~-~~~~--~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 409 (515)
T TIGR03098 333 AIPNAEVLVLR-EDGS--ECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGF 409 (515)
T ss_pred ecCCCEEEEEC-CCCC--CCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCce
Confidence 99999999999 5543 445678999999999999999999988876552 34899999999999999
Q ss_pred EEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 509 VKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 509 l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++.||.+|+|++ +|.+++|.+||++|..||.|.+|+|+|.++
T Consensus 410 l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 452 (515)
T TIGR03098 410 LYFVGRRDEMIKT-SGYRVSPTEVEEVAYATGLVAEAVAFGVPD 452 (515)
T ss_pred EEEEeccccceec-CCEEeCHHHHHHHHhcCCCeeEEEEEeccC
Confidence 9999999999997 799999999999999999999999999765
No 66
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-55 Score=470.09 Aligned_cols=441 Identities=27% Similarity=0.368 Sum_probs=355.3
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.+.++++|+++|+++. +.. +.+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a 89 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVR---HQA----LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFA 89 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEec---CCC----cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 468999999999999999999874 321 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh-----hhhcccc------------ccccCccEEEEecCCc
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK-----ELLSPDC------------RSAQRLRVMVCFTSLT 183 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~-----~~~~~~~------------~~~~~~~~~~~~~~~~ 183 (553)
|+++|++++++++..+.+++.++++.++++++++++.... .+..... ...+....++.+....
T Consensus 90 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 90 TARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred HHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 9999999999999999999999999999999998764321 1111000 0112222333332211
Q ss_pred hHHHHHHhhCCceeeeHHHHHhccccc-----ccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhcc
Q 008787 184 AEQKEMAVQTGIKPYSWDEFLHLGKVN-----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ 258 (553)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~ 258 (553)
. .....|+++....... ........++++++++|||||||.||+|.+||+++...+......+
T Consensus 170 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-- 237 (558)
T PRK12583 170 P----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-- 237 (558)
T ss_pred C----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh--
Confidence 1 1123344443322110 1112234678899999999999999999999999988887766555
Q ss_pred ccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHH
Q 008787 259 FEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALE 335 (553)
Q Consensus 259 ~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~ 335 (553)
++..+|++++..|++|.+|... .+.++..|+++++... ++..+++.++++++|++.++|+++..+++....
T Consensus 238 ---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~--- 311 (558)
T PRK12583 238 ---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQR--- 311 (558)
T ss_pred ---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccc---
Confidence 6788899999999999999876 5567888998887653 899999999999999999999998776532110
Q ss_pred hhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCC-ceEee
Q 008787 336 ELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQG 414 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~ 414 (553)
...++ +++|.+++||+++++++.+++.+.++. .+++.
T Consensus 312 ----------------------------------~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~ 349 (558)
T PRK12583 312 ----------------------------------GNFDL--------SSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIA 349 (558)
T ss_pred ----------------------------------cCCCc--------hhheEEEecCCCCCHHHHHHHHHHcCCcceecc
Confidence 00111 389999999999999999999888864 69999
Q ss_pred eccccCCCceeeccCCC--ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-c
Q 008787 415 YGLTETCGPTTVCFPDE--MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I 491 (553)
Q Consensus 415 YG~tE~g~~~~~~~~~~--~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~ 491 (553)
||+||++.+++...... .....++|.|.+++.+++++ +++ .+++.|+.|||+++|+.++.||+++++.+.+.+ .
T Consensus 350 YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~ 426 (558)
T PRK12583 350 YGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVD-PDG--ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDE 426 (558)
T ss_pred ccccccccceeccCcccccccccCCCCccCCCCeEEEEC-CCC--CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCC
Confidence 99999998776654322 23447899999999999999 553 456677899999999999999999999998887 8
Q ss_pred CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 492 DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 492 ~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
++||+|||+|++++||++++.||.+|+|++ +|++++|.+||++|..||+|.+|+|+|.++
T Consensus 427 ~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~ 486 (558)
T PRK12583 427 DGWMHTGDLATMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAVADVQVFGVPD 486 (558)
T ss_pred CCCeeccceEEECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeeec
Confidence 899999999999999999999999999996 899999999999999999999999999754
No 67
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.7e-55 Score=464.27 Aligned_cols=431 Identities=24% Similarity=0.340 Sum_probs=353.8
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
.+++.+.|..++ .+|+++|+... ++ +.+||.||.+++.++|.+|++.|+++||+|+++++|+++++++++|
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~---~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la 72 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETP---DG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLA 72 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeC---CC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 368899999999 99999999764 33 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.+++++++++......+...... .....++.++.... ..+
T Consensus 73 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~ 137 (504)
T PRK07514 73 TLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAA--AGAPHVETLDADGT-------------GSL 137 (504)
T ss_pred HHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhc--cCCceEEEecCCCc-------------ccH
Confidence 999999999999999999999999999999999998766554332211 12222333332211 112
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.+..... ...........+++++++|||||||.||+|.+||.++...+......+ ++..++++++.+|++|..|
T Consensus 138 ~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g 211 (504)
T PRK07514 138 LEAAAAA-PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-----RFTPDDVLIHALPIFHTHG 211 (504)
T ss_pred HHhhhhc-CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCccEEEEecchHHHHH
Confidence 2222111 111223345678999999999999999999999999998877665554 6778899999999999999
Q ss_pred HHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 281 RVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 281 ~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
+.. ...++..|+++++.+. ++..+++.+ .++|++.++|.++.++++...
T Consensus 212 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~--------------------------- 262 (504)
T PRK07514 212 LFVATNVALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPR--------------------------- 262 (504)
T ss_pred HHHHHHHHHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCC---------------------------
Confidence 875 5567899999998876 899999998 479999999999988764210
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCcc
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTA 438 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~ 438 (553)
.+... .+++|.+++||+++++++.+.+++.++.++++.||+||++........ ......++
T Consensus 263 ----------~~~~~--------~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~ 323 (504)
T PRK07514 263 ----------LTREA--------AAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYD-GERRAGTV 323 (504)
T ss_pred ----------CCccc--------ccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCcc-ccccCccc
Confidence 00011 138999999999999999999999999999999999998865543322 22334789
Q ss_pred CCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecccC
Q 008787 439 GPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKN 517 (553)
Q Consensus 439 G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d 517 (553)
|.|++++++++++ ++++ .+++.|+.|||+++|+.++.||+++++.+++.| .+|||+|||+|+++++|++++.||.+|
T Consensus 324 G~~~~~~~v~i~d-~~~~-~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~ 401 (504)
T PRK07514 324 GFPLPGVSLRVTD-PETG-AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKD 401 (504)
T ss_pred ccCCCCcEEEEEE-CCCC-CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccc
Confidence 9999999999999 4443 556678999999999999999999999999888 589999999999999999999999999
Q ss_pred ceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 518 LIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 518 ~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|++ +|++++|.+||+++.++++|.+++|+|.++
T Consensus 402 ~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~ 435 (504)
T PRK07514 402 LIIS-GGYNVYPKEVEGEIDELPGVVESAVIGVPH 435 (504)
T ss_pred eEEe-CCeEECHHHHHHHHHhCCCeeEEEEEeCCC
Confidence 9996 899999999999999999999999999765
No 68
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-56 Score=477.72 Aligned_cols=435 Identities=19% Similarity=0.239 Sum_probs=335.3
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCC---CCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDG---KFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEA 117 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~---~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~ 117 (553)
..++.++++++++++|+++|+++. +. .++.++.+||+||.++++++|++|.+. +++||+|+++++|+++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~ 108 (612)
T PRK12476 33 GTTLISLIERNIANVGDTVAYRYL---DHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAG 108 (612)
T ss_pred cCcHHHHHHHHHHhCCCceEEEEE---ccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHH
Confidence 468999999999999999999875 31 124456899999999999999999986 99999999999999999999
Q ss_pred HHHHHhcCCEEeeC-CCCCC--hhHHHHHHhhcCceEEEEcchhhhhhhccccccc-cCccEEEEecCCchHHHHHHhhC
Q 008787 118 MEACNALSLICVPL-YDTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA-QRLRVMVCFTSLTAEQKEMAVQT 193 (553)
Q Consensus 118 ~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 193 (553)
+|||+++|++++|+ ++..+ ++++.++++.++++++|++......+........ .....++.++....
T Consensus 109 ~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------- 179 (612)
T PRK12476 109 FFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD--------- 179 (612)
T ss_pred HHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc---------
Confidence 99999999999999 56665 7899999999999999998776554322211100 01123333322110
Q ss_pred CceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCC-CCCCcEEEEe
Q 008787 194 GIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDK-MTVDDVYLSF 272 (553)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 272 (553)
.. ..........++++++|+|||||||.||||.+||+++...+......+ . +..++++++.
T Consensus 180 ------------~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~l~~ 241 (612)
T PRK12476 180 ------------SA-GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-----DLLDRNTHGVSW 241 (612)
T ss_pred ------------cc-cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-----ccCCCCceEEEe
Confidence 00 001111234678999999999999999999999999987766544444 4 5678999999
Q ss_pred cChHHHHHHHHHHHHHHcCcEEEEecC-----ChHHHHHHhh--hhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHH
Q 008787 273 LPLAHILDRVIEEYFFRRGASVGYYHG-----DLNALRDDLM--ELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIF 345 (553)
Q Consensus 273 ~p~~~~~g~~~~~~~l~~g~~~~~~~~-----~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (553)
+|++|.+|+...+.+++.|+++++... ++..+++.++ +++++.+..+|+++..++.......
T Consensus 242 ~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~----------- 310 (612)
T PRK12476 242 LPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPA----------- 310 (612)
T ss_pred CCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChh-----------
Confidence 999999998776666556666555432 7889999995 5899999999999887754210000
Q ss_pred HHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc---CC---ceEeeecccc
Q 008787 346 DALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC---CA---FLVQGYGLTE 419 (553)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~---~~---~i~~~YG~tE 419 (553)
....+++ +++| +++||+++++++.+.+.+.| |+ .+++.||+||
T Consensus 311 ----------------------~~~~~~l--------~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE 359 (612)
T PRK12476 311 ----------------------EGDDIDL--------SNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAE 359 (612)
T ss_pred ----------------------hhcCcch--------hHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhh
Confidence 0001112 3789 99999999999999999887 44 4899999999
Q ss_pred CCCceeeccCCC--------------------------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecC
Q 008787 420 TCGPTTVCFPDE--------------------------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGK 473 (553)
Q Consensus 420 ~g~~~~~~~~~~--------------------------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~ 473 (553)
++...+...... ....+++|+|+|+.+++|+| ++.+ .+++.|+.|||+++|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd-~~~g-~~~~~g~~GEl~v~g~ 437 (612)
T PRK12476 360 ATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVD-PDTG-AELPDGEVGEIWLHGD 437 (612)
T ss_pred hheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEe-CCCC-cCCCCCCEEEEEEcCC
Confidence 876544322111 00125789999999999999 5522 3455679999999999
Q ss_pred CccccccCChhhhhhhcc-------------------CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHH
Q 008787 474 TLFSGYYKNPDLTRESII-------------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLEN 534 (553)
Q Consensus 474 ~~~~gy~~~~~~~~~~~~-------------------~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~ 534 (553)
+++.||+++|+.+++.|. ++||+|||+|+++ ||+|+|+||.+|+|++ +|++|+|.|||+
T Consensus 438 ~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~-~G~~I~p~eIE~ 515 (612)
T PRK12476 438 NIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVI-DGRNHYPQDIEA 515 (612)
T ss_pred cccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEE-CCcccCHHHHHH
Confidence 999999999999988873 2499999999985 9999999999999997 899999999999
Q ss_pred HHhc-CcCcce--EEEEecCC
Q 008787 535 VYCV-APIIED--VSISYSSV 552 (553)
Q Consensus 535 ~l~~-~p~V~~--~~V~g~~~ 552 (553)
+|.+ ||.|.+ ++|+|.++
T Consensus 516 ~l~~~~p~V~~~~v~v~~~~~ 536 (612)
T PRK12476 516 TVAEASPMVRRGYVTAFTVPA 536 (612)
T ss_pred HHHHhcccccCCcEEEEEecC
Confidence 9984 899999 77788764
No 69
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2e-56 Score=472.23 Aligned_cols=419 Identities=19% Similarity=0.238 Sum_probs=323.4
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
+-+.+.|+.+++++|+++|+++. .++.++++||+||.++++++|..|.++ ++||+|+++++|++++++++|||
T Consensus 2 ~~~~~~l~~~~~~~~~~~a~~~~-----~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~ 74 (525)
T PRK05851 2 NELAAALSDAMTASGRDLVVLDR-----ESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGA 74 (525)
T ss_pred chHHHHHHHHhcCCCCceEEeCC-----CCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHH
Confidence 44889999999999999999864 334578999999999999999999988 89999999999999999999999
Q ss_pred HhcCCEEeeCCCC-------CChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCC
Q 008787 122 NALSLICVPLYDT-------LGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTG 194 (553)
Q Consensus 122 ~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (553)
+++|+++++++.. ...+++.++++.+++++++++......+.... .. +.+.+
T Consensus 75 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~----~~~~~------------- 133 (525)
T PRK05851 75 WLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVD----SS----VTVHD------------- 133 (525)
T ss_pred HHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhh----cc----ccccc-------------
Confidence 9999986543311 12345566789999999999877654432211 00 00000
Q ss_pred ceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCC-CCcEEEEec
Q 008787 195 IKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT-VDDVYLSFL 273 (553)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 273 (553)
+...... ....+.....++++++|+|||||||.||+|++||.++...+......+ ++. .+|++++++
T Consensus 134 -----~~~~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~d~~l~~~ 201 (525)
T PRK05851 134 -----LATAAHT--NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-----GLDAATDVGCSWL 201 (525)
T ss_pred -----ccccccc--cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCCCCeEEEcC
Confidence 0000000 000111224678999999999999999999999999998888766655 666 889999999
Q ss_pred ChHHHHHHHHHHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 008787 274 PLAHILDRVIEEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDAL 348 (553)
Q Consensus 274 p~~~~~g~~~~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (553)
|++|.+|+...+.+++.|+++++.+. ++..+++.+.++++|++.. |.++..++......
T Consensus 202 pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~-p~~~~~~l~~~~~~--------------- 265 (525)
T PRK05851 202 PLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAA-PNFAYNLIGKYARR--------------- 265 (525)
T ss_pred CCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeC-CcHHHHHHHHhhcc---------------
Confidence 99999999877788999999998762 5788999999999998755 44444333211000
Q ss_pred HHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHh---cCC---ceEeeeccccCCC
Q 008787 349 YKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT---CCA---FLVQGYGLTETCG 422 (553)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~---~~~---~i~~~YG~tE~g~ 422 (553)
....++ +++|.+++||+++++++.++|.+. +|. .+++.||+||++.
T Consensus 266 --------------------~~~~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~ 317 (525)
T PRK05851 266 --------------------VSDVDL--------GALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTC 317 (525)
T ss_pred --------------------ccCCCH--------HHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhce
Confidence 000111 379999999999999999988764 454 4999999999986
Q ss_pred ceeeccCC--------------CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhh
Q 008787 423 PTTVCFPD--------------EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRE 488 (553)
Q Consensus 423 ~~~~~~~~--------------~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~ 488 (553)
.+...... ......++|+|+||++++|+| +++. .+++.|+.|||+++|++++.||+++++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~-~~~~~g~~GEl~v~g~~~~~GY~~~~~~~-- 393 (525)
T PRK05851 318 AVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISP-GDGA-AGVAGREIGEIEIRGASMMSGYLGQAPID-- 393 (525)
T ss_pred EEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEEC-CCCC-ccCCCCCeEEEEEecCchhhccccCCccC--
Confidence 65543221 012236799999999999998 5443 34566789999999999999999998643
Q ss_pred hccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 489 SIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 489 ~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.+|||+|||+|+++ +|+|+++||.+|+|++ +|++|+|.|||++|.+||+|.+|+|++.++
T Consensus 394 --~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~ 453 (525)
T PRK05851 394 --PDDWFPTGDLGYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVREGAVVAVGT 453 (525)
T ss_pred --CCCceeccceEEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcccceEEEEEe
Confidence 47899999999997 8999999999999997 899999999999999999999999998764
No 70
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-55 Score=464.28 Aligned_cols=434 Identities=22% Similarity=0.249 Sum_probs=354.8
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..|+.++|.++++++|+++|+++. + +.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la 81 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVLG----D-----TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGA 81 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEEC----C-----CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 468999999999999999999864 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch-hhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK-KVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
|+++|++++++++..+.+++.++++.++++.+++++. ....... ..........++.+...... ..
T Consensus 82 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------~~ 148 (524)
T PRK06188 82 AQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALA-LLARVPSLKHVLTLGPVPDG------------VD 148 (524)
T ss_pred HHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHH-HhhhcCCceEEEEeCCccch------------hh
Confidence 9999999999999999999999999999999999876 3222211 11122333445544432110 00
Q ss_pred HHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHH
Q 008787 200 WDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 279 (553)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 279 (553)
..+..... ..........++++++++|||||||.||+|.+||.++...+......+ .+..++++++.+|++|.+
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~ 222 (524)
T PRK06188 149 LLAAAAKF-GPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-----EWPADPRFLMCTPLSHAG 222 (524)
T ss_pred HHHhhhcc-CcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCcEEEEecCchhhh
Confidence 11111111 001111122455699999999999999999999999998888766655 677889999999999988
Q ss_pred HHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 280 DRVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 280 g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
++. .+.+++.|+++++.+. ++..+++.++++++|++.++|+++..+++.....
T Consensus 223 g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~------------------------- 276 (524)
T PRK06188 223 GAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLR------------------------- 276 (524)
T ss_pred hHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc-------------------------
Confidence 874 4567889999999887 8999999999999999999999999886521100
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-----cc
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-----MC 433 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~-----~~ 433 (553)
..+ ++++|.+++||++++++....+.+.++..+++.||+||++..++...... ..
T Consensus 277 ------------~~~--------l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 336 (524)
T PRK06188 277 ------------TRD--------LSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPK 336 (524)
T ss_pred ------------CCC--------CcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhccccccc
Confidence 001 14899999999999999888888888999999999999976665543321 23
Q ss_pred ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEe
Q 008787 434 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIID 513 (553)
Q Consensus 434 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~G 513 (553)
...++|+|+|++++++++ +++ .+++.|+.|||+++|+.++.||++++..+...+.+|||+|||+|++++||++++.|
T Consensus 337 ~~~~~G~p~~g~~v~i~~-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~G 413 (524)
T PRK06188 337 RLTSCGRPTPGLRVALLD-EDG--REVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVD 413 (524)
T ss_pred cCCccccccCCcEEEEEc-CCC--CCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEcCCccEEEEe
Confidence 446899999999999998 554 34567789999999999999999999999988999999999999999999999999
Q ss_pred cccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 514 RKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 514 R~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|.+|+|++ +|++++|.+||++|.+||+|.+++|+|.++
T Consensus 414 R~~~~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~ 451 (524)
T PRK06188 414 RKKDMIVT-GGFNVFPREVEDVLAEHPAVAQVAVIGVPD 451 (524)
T ss_pred ccccceec-CCEEECHHHHHHHHHhCCCeeEEEEEeccC
Confidence 99999996 899999999999999999999999999764
No 71
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7e-55 Score=464.57 Aligned_cols=454 Identities=23% Similarity=0.305 Sum_probs=354.9
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
....++.++|..+++++|+++|+++. + ..+||.||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~ 90 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAI 90 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 34578999999999999999999864 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchH-HHH---------
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAE-QKE--------- 188 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------- 188 (553)
|||+++|++++|+++..+.+++.++++.++++++++++.....+...... .....++........ ...
T Consensus 91 la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (557)
T PRK07059 91 AAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK--TAVKHVVVASMGDLLGFKGHIVNFVVRR 168 (557)
T ss_pred HHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc--cCCceeEEeccccccccccccccccccc
Confidence 99999999999999999999999999999999999987665443322211 112222222110000 000
Q ss_pred HH----hhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccc-cCC-
Q 008787 189 MA----VQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQF-EDK- 262 (553)
Q Consensus 189 ~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~-~~~- 262 (553)
.. .........+.+++..............++++++++|||||||.||+|.++|.+++..+......+... ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 248 (557)
T PRK07059 169 VKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKP 248 (557)
T ss_pred ccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccC
Confidence 00 000112234555544332222233445788999999999999999999999999987654433222110 001
Q ss_pred CCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhch
Q 008787 263 MTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRP 339 (553)
Q Consensus 263 ~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~ 339 (553)
......+++.+|++|.+++.. .+.++..|++.++.+. ++..+++.++++++|.+.++|.++..+.+...
T Consensus 249 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~-------- 320 (557)
T PRK07059 249 RPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPD-------- 320 (557)
T ss_pred CCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcC--------
Confidence 112457788999999998764 5567788888776654 88999999999999999999999998764210
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeecccc
Q 008787 340 LRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTE 419 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE 419 (553)
....++ +++|.++.||+++++.+.+.|.+.+++++++.||+||
T Consensus 321 -----------------------------~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 363 (557)
T PRK07059 321 -----------------------------FDKLDF--------SKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSE 363 (557)
T ss_pred -----------------------------cCcCCc--------hhheEEEeccccCCHHHHHHHHHHhCCCeeecccccc
Confidence 011112 3789999999999999999999989999999999999
Q ss_pred CCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccC
Q 008787 420 TCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTG 498 (553)
Q Consensus 420 ~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 498 (553)
++.+++.+.......+.++|.|++++++++++ +++ .+++.|+.|||+++|+.++.||+++++.+.+.+ .+|||+||
T Consensus 364 ~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TG 440 (557)
T PRK07059 364 TSPVATCNPVDATEFSGTIGLPLPSTEVSIRD-DDG--NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTG 440 (557)
T ss_pred ccchhhcCCCCCCCcCCcccCccCCcEEEEEC-CCC--CCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecC
Confidence 98876655443334457899999999999998 554 455677899999999999999999999998877 68999999
Q ss_pred ceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 499 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 499 D~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++++||++++.||.+|+|++ +|++++|.+||++|.+||+|.+++|+|+++
T Consensus 441 Dl~~~~~~g~~~~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~ 493 (557)
T PRK07059 441 DVGVMDERGYTKIVDRKKDMILV-SGFNVYPNEIEEVVASHPGVLEVAAVGVPD 493 (557)
T ss_pred cEEEEcCCCcEEEecccccceEE-CCEEEcHHHHHHHHHhCCceeEEEEEeccc
Confidence 99999999999999999999997 799999999999999999999999998754
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.5e-55 Score=508.63 Aligned_cols=444 Identities=23% Similarity=0.286 Sum_probs=357.2
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
....++.+.+.++++++|+++|+++. ++ +++||+||.++++++|+.|++ ++++||+|+++++|++++++++
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~ 682 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALAN 682 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHH
Confidence 34578999999999999999999853 23 479999999999999999987 4899999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccc-cccCccEEEEecCCchHHHHHHhhCCcee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR-SAQRLRVMVCFTSLTAEQKEMAVQTGIKP 197 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (553)
+||+++|++++|+++..+.+++.+++++++++++++++.....+.+.... ..+....++..++...... ..
T Consensus 683 la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 754 (1146)
T PRK08633 683 LALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKIS--------KV 754 (1146)
T ss_pred HHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccc--------hh
Confidence 99999999999999999999999999999999999998766655321100 1112223333332211000 00
Q ss_pred eeHHHHHhccccc-----ccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEe
Q 008787 198 YSWDEFLHLGKVN-----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSF 272 (553)
Q Consensus 198 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (553)
..+.......... ........++++++++|||||||.||+|.+||+++...+......+ +...+|++++.
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~ 829 (1146)
T PRK08633 755 DKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-----NLRNDDVILSS 829 (1146)
T ss_pred HHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-----CCCCCCEEEEc
Confidence 0111111110000 0001345678999999999999999999999999998887766655 67788999999
Q ss_pred cChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 008787 273 LPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALY 349 (553)
Q Consensus 273 ~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (553)
+|++|.+|+.. .+.++..|+++++.+. +++.+++.++++++|++.++|++++.+.+...
T Consensus 830 ~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------ 891 (1146)
T PRK08633 830 LPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKK------------------ 891 (1146)
T ss_pred CcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccc------------------
Confidence 99999999876 6678899999888764 89999999999999999999999988764211
Q ss_pred HHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccC
Q 008787 350 KYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFP 429 (553)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~ 429 (553)
.+.. ..+++|.+++||+++++++.+.+++.+|.++++.||+||++++++....
T Consensus 892 -------------------~~~~--------~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~ 944 (1146)
T PRK08633 892 -------------------LHPL--------MFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLP 944 (1146)
T ss_pred -------------------cCcc--------cCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecC
Confidence 0001 1148999999999999999999999999999999999999887765432
Q ss_pred CC---------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccC----Cccc
Q 008787 430 DE---------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID----GWFH 496 (553)
Q Consensus 430 ~~---------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~----g~~~ 496 (553)
+. ....+++|+|+||++++++| ++++ .+++.|+.|||+++|++++.||+++|+.+++.+.+ |||+
T Consensus 945 ~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~ 1022 (1146)
T PRK08633 945 DVLAADFKRQTGSKEGSVGMPLPGVAVRIVD-PETF-EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYV 1022 (1146)
T ss_pred cccccccccccCCCCCCccccCCCCEEEEEc-CCCC-ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEE
Confidence 21 12357899999999999999 4433 45567899999999999999999999999988866 8999
Q ss_pred cCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCc--CcceEEEEecCC
Q 008787 497 TGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAP--IIEDVSISYSSV 552 (553)
Q Consensus 497 TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p--~V~~~~V~g~~~ 552 (553)
|||+|++|+||++++.||.+|+|++ +|++++|.|||++|.+|| .+.+|+|+|.++
T Consensus 1023 TGD~~~~~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~ 1079 (1146)
T PRK08633 1023 TGDKGHLDEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEVVFAVTAVPD 1079 (1146)
T ss_pred CCCEEEEcCCceEEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCceEEEEeccC
Confidence 9999999999999999999999996 899999999999999999 567899999875
No 73
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=7.2e-56 Score=517.93 Aligned_cols=445 Identities=19% Similarity=0.143 Sum_probs=348.6
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCC---CCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGK---FGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~---~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
.++.++|.++++++|+++|+++. ... ....+++||+||.++++++|++|.+.|+++|++|+++++|++++++++
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~---~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~ 312 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVET---PSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAV 312 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEec---cccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHH
Confidence 57999999999999999999864 211 123468999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh---hhhhccccccc---cCccEEEEecCCchHHHHHHhh
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV---KELLSPDCRSA---QRLRVMVCFTSLTAEQKEMAVQ 192 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 192 (553)
+||+++|++++|++|..+.+++.++++.++++++++..... ..+........ .....+. +.+.....
T Consensus 313 lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------ 385 (1389)
T TIGR03443 313 MGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLV------ 385 (1389)
T ss_pred HHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-eccccccc------
Confidence 99999999999999999999999999999999999875421 11101000000 0111111 11100000
Q ss_pred CCceeeeHHHHHhccc--ccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEE
Q 008787 193 TGIKPYSWDEFLHLGK--VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYL 270 (553)
Q Consensus 193 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (553)
.........+++.... ..........++++++++|||||||.||||+++|+++.+.+......+ ++..+|+++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~ 460 (1389)
T TIGR03443 386 GGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-----GLSENDKFT 460 (1389)
T ss_pred ccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 0000000000000000 000111234678999999999999999999999999999887766665 678899999
Q ss_pred EecChHHHHHHHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 271 SFLPLAHILDRVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 271 ~~~p~~~~~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
...|++|..++...+.+++.|+++++.+. ++..+++.++++++|++.++|++++.|.....
T Consensus 461 ~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~--------------- 525 (1389)
T TIGR03443 461 MLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT--------------- 525 (1389)
T ss_pred EecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc---------------
Confidence 99999998888778889999999998764 68899999999999999999999987743100
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCcee
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTT 425 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~ 425 (553)
...+++|.+++||+++++...+.+.... ++++++.||+||++..++
T Consensus 526 ---------------------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 572 (1389)
T TIGR03443 526 ---------------------------------TPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVS 572 (1389)
T ss_pred ---------------------------------ccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEE
Confidence 0014899999999999999999888765 788999999999987665
Q ss_pred eccCCC----------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc----
Q 008787 426 VCFPDE----------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII---- 491 (553)
Q Consensus 426 ~~~~~~----------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~---- 491 (553)
...... .....++|+|+++++++|+| +++...+++.|+.|||+|+||+++.||+++|+.|.+.|.
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~ 651 (1389)
T TIGR03443 573 YFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVN-RNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWF 651 (1389)
T ss_pred EEEccccccccchhhcccCcCcCCCccCCCEEEEEC-CccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcc
Confidence 432111 01235789999999999999 655556777889999999999999999999999998872
Q ss_pred -------------------------CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEE
Q 008787 492 -------------------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVS 546 (553)
Q Consensus 492 -------------------------~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~ 546 (553)
++||+|||+|++++||+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+|+
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~~l~~~p~V~~a~ 730 (1389)
T TIGR03443 652 VDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI-RGFRIELGEIDTHLSQHPLVRENV 730 (1389)
T ss_pred cCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe-CcEEecHHHHHHHHHhCcchheeE
Confidence 479999999999999999999999999997 899999999999999999999999
Q ss_pred EEecC
Q 008787 547 ISYSS 551 (553)
Q Consensus 547 V~g~~ 551 (553)
|++.+
T Consensus 731 v~~~~ 735 (1389)
T TIGR03443 731 TLVRR 735 (1389)
T ss_pred EEEee
Confidence 98754
No 74
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1e-54 Score=461.71 Aligned_cols=454 Identities=23% Similarity=0.295 Sum_probs=353.1
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
..+.++.++|.++++++|+++|+.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+.++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~p~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~ 88 (541)
T TIGR03205 18 IARGTLPDLLSKAAADYGPRPALEFR----D-----RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINF 88 (541)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEC----C-----cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 34568999999999999999999763 2 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchh--hhhhhccccccccCccEEEEecCCchHHHHH---HhhC
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK--VKELLSPDCRSAQRLRVMVCFTSLTAEQKEM---AVQT 193 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 193 (553)
+||+++|++++|+++..+.+++.++++.++++++++++.. .....+.... .....++............ ....
T Consensus 89 la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (541)
T TIGR03205 89 FGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK--GLLDRLIVCEDDNWGKVGTPQAPIPA 166 (541)
T ss_pred HHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc--ccceEEEEecccccccccccccccCC
Confidence 9999999999999999999999999999999999987632 1111111110 1122333332211000000 0001
Q ss_pred CceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhcc-ccCCCCCCcEEEEe
Q 008787 194 GIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ-FEDKMTVDDVYLSF 272 (553)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 272 (553)
.....++++++..... ........++++++++|||||||.||+|.++|.++....... ..+.. ........+++++.
T Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 244 (541)
T TIGR03205 167 DPRIVTYADFVKGAAA-PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICV 244 (541)
T ss_pred CcccccHHHHHhcCCC-CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEe
Confidence 1223456666543211 122234567899999999999999999999999987654321 11100 00122345789999
Q ss_pred cChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 008787 273 LPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYK 350 (553)
Q Consensus 273 ~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
.|++|.+++.. ++.++..|+++++... +++.+++.|+++++|++.++|.++..|++...
T Consensus 245 ~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------- 305 (541)
T TIGR03205 245 LPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPS------------------- 305 (541)
T ss_pred ccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc-------------------
Confidence 99999998875 5567889999887765 89999999999999999999999988753100
Q ss_pred HHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCC
Q 008787 351 YKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD 430 (553)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~ 430 (553)
....++ +++|.+++||+++++++.+++.+.++.++++.||+||++..++.....
T Consensus 306 ------------------~~~~~~--------~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~ 359 (541)
T TIGR03205 306 ------------------LEKRDL--------SSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPE 359 (541)
T ss_pred ------------------ccccCc--------cccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCC
Confidence 000011 379999999999999999999988899999999999998877655443
Q ss_pred CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEE
Q 008787 431 EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVK 510 (553)
Q Consensus 431 ~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~ 510 (553)
.....+++|++++++.+++++.++++ .+++.|+.|||+++|++++.||+++++.+.+.|.++||+|||+|++++||+++
T Consensus 360 ~~~~~~~~G~~~~~~~~~v~~~d~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~ 438 (541)
T TIGR03205 360 GPDKPGSIGLMLPGIELDVVSLDDPT-KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFF 438 (541)
T ss_pred CCCCCCCcceeccCceeEEEecCCCC-ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEE
Confidence 33334789999999999987633332 45567789999999999999999999999998989999999999999999999
Q ss_pred EEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 511 IIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 511 ~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+.||.+|+|++ +|++++|.+||+++.+||.|.+++|+|.++
T Consensus 439 i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 479 (541)
T TIGR03205 439 LVDRKKDMIIS-GGFNVYPQMIEQAIYEHPGVQEVIVIGIPD 479 (541)
T ss_pred EEccccCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCC
Confidence 99999999996 899999999999999999999999998764
No 75
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-55 Score=464.25 Aligned_cols=442 Identities=19% Similarity=0.213 Sum_probs=348.4
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
...++.++|.++++++|+++|++.. . +++||.||.+++.++|..|.+.|+++||+|+++++|+.+++++++
T Consensus 8 ~~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 78 (540)
T PRK06164 8 RADTLASLLDAHARARPDAVALIDE----D-----RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFL 78 (540)
T ss_pred CCCCHHHHHHHHHHhCCCCeEEecC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHH
Confidence 3468999999999999999999843 2 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh-----hhhhccccccccCccEEEEecCCchHHHHHHhhCC
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV-----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTG 194 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (553)
||+++|++++|+++..+.+++.++++.+++++++++.... ..+.............++.++....... .
T Consensus 79 a~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 152 (540)
T PRK06164 79 ACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATP------A 152 (540)
T ss_pred HHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCC------C
Confidence 9999999999999999999999999999999999977642 1111111111223334444431110000 0
Q ss_pred ceeeeHHHHHhccccccc---ccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEE
Q 008787 195 IKPYSWDEFLHLGKVNEM---EILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLS 271 (553)
Q Consensus 195 ~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (553)
.....+.++......... .......+++++++|||||||.||+|.+||+++...+..+...+ ++..++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~ 227 (540)
T PRK06164 153 PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-----GYDPGAVLLA 227 (540)
T ss_pred CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEEE
Confidence 000011111110000000 01223568899999999999999999999999998888776666 6778999999
Q ss_pred ecChHHHHHHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 008787 272 FLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYK 350 (553)
Q Consensus 272 ~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
.+|++|.+|+...+.++..|+++++.+. ++..+++.++++++|+++++|.++..|.+... .
T Consensus 228 ~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~-~----------------- 289 (540)
T PRK06164 228 ALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG-E----------------- 289 (540)
T ss_pred cCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc-c-----------------
Confidence 9999999999877888999999988776 89999999999999999999999998865300 0
Q ss_pred HHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcC-CCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccC
Q 008787 351 YKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGG-APLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFP 429 (553)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG-~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~ 429 (553)
. ...+++|.+.++| .+...++.+++... ++++++.||+||++.+.+....
T Consensus 290 --------------------~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~ 340 (540)
T PRK06164 290 --------------------R--------ADFPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPA 340 (540)
T ss_pred --------------------c--------CCCcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCC
Confidence 0 0113788877665 55666777777765 8999999999999876655443
Q ss_pred CC--ccccCccCCCC-CCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEcc
Q 008787 430 DE--MCMVGTAGPVS-VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILP 505 (553)
Q Consensus 430 ~~--~~~~~~~G~~~-~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~ 505 (553)
.. .....+.|.++ ++++++++| ++++ .+++.|+.|||+|+|++++.||+++++.+.+.| .+|||+|||+|++|+
T Consensus 341 ~~~~~~~~~~~g~~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~ 418 (540)
T PRK06164 341 TDPVSVRIEGGGRPASPEARVRARD-PQDG-ALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRG 418 (540)
T ss_pred CCCCcceeccCccccCCCeEEEEec-CCCC-cCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcC
Confidence 22 22224567765 899999998 4433 456678999999999999999999999999988 689999999999999
Q ss_pred CCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 506 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 506 dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
||++++.||.+|+|++ +|++++|.+||+.|..||+|.+++|+|.+
T Consensus 419 ~g~l~~~GR~~~~i~~-~G~~i~p~eIE~~l~~~~~v~~~~v~~~~ 463 (540)
T PRK06164 419 DGQFVYQTRMGDSLRL-GGFLVNPAEIEHALEALPGVAAAQVVGAT 463 (540)
T ss_pred CceEEEEeecCCeEEE-CCEEcCHHHHHHHHHhCCCceeEEEEecC
Confidence 9999999999999997 79999999999999999999999999965
No 76
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=4.9e-55 Score=463.14 Aligned_cols=435 Identities=20% Similarity=0.222 Sum_probs=350.1
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
+.++.++|.++++ |+++|+++. + +.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++|
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG----E-----RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC----C-----CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHH
Confidence 5689999998887 999999853 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh----hhhhccccccccCccEEEEecCCchHHHHHHhhCCce
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV----KELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIK 196 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (553)
|+++|++++++.+.....++..+++.+++++++++.... ...........+....++..... .
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------~ 159 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDD-------------G 159 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCC-------------C
Confidence 999999888777777778899999999999999886431 11111112222333333333221 1
Q ss_pred eeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH
Q 008787 197 PYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
...+.+++..... ..+.....++++++++|||||||.||+|++||.++...+......+ .+..++++++.+|++
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~ 233 (536)
T PRK10946 160 EHSLDDAINHPAE-DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----GFTPQTRYLCALPAA 233 (536)
T ss_pred CccHHHHhhCccc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCceEEEecCcc
Confidence 1234444433211 1222345678999999999999999999999999999888765555 678889999999999
Q ss_pred HHHHHHH--HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 008787 277 HILDRVI--EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 353 (553)
Q Consensus 277 ~~~g~~~--~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
|.+++.. .+.++..|+++++.+. ++..+++.++++++|++.++|..+..+++.+......
T Consensus 234 h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~----------------- 296 (536)
T PRK10946 234 HNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSR----------------- 296 (536)
T ss_pred ccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCcc-----------------
Confidence 9988764 5567899999988765 8999999999999999999999999887543111000
Q ss_pred HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCcc
Q 008787 354 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMC 433 (553)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~ 433 (553)
...+++|.+++||+++++++.+.+.+.+|+++++.||+||++............
T Consensus 297 --------------------------~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~ 350 (536)
T PRK10946 297 --------------------------AQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDER 350 (536)
T ss_pred --------------------------ccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCcccc
Confidence 001389999999999999999999998999999999999965433222222223
Q ss_pred ccCccCCCC-CCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEE
Q 008787 434 MVGTAGPVS-VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKI 511 (553)
Q Consensus 434 ~~~~~G~~~-~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~ 511 (553)
...++|+|+ |+..+++++ +++ .++++|+.|||+++|+.++.||+++++.+.+.| .+|||+|||+|++|+||++++
T Consensus 351 ~~~~~G~p~~~~~~v~i~d-~~~--~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~ 427 (536)
T PRK10946 351 IFTTQGRPMSPDDEVWVAD-ADG--NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITV 427 (536)
T ss_pred ccccCCcccCCCceEEEEC-CCC--CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEE
Confidence 347899998 789999998 544 455678999999999999999999999999888 689999999999999999999
Q ss_pred EecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 512 IDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 512 ~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.||.+|+|++ +|++++|.+||+.|.+||+|.+++|++.++
T Consensus 428 ~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 467 (536)
T PRK10946 428 VGREKDQINR-GGEKIAAEEIENLLLRHPAVIHAALVSMED 467 (536)
T ss_pred eccccceeec-CCEEEcHHHHHHHHHhCCCcceEEEEcCCC
Confidence 9999999996 899999999999999999999999999865
No 77
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-54 Score=459.09 Aligned_cols=421 Identities=20% Similarity=0.271 Sum_probs=337.9
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCchhHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~-gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
...++.++|.+++. ++++++++. + +.+||.||.+++.++|++|+++ |++++++|+++++|++++++++
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~----~-----~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~ 71 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFE----D-----SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLL 71 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEEC----C-----cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHH
Confidence 35678999988875 788998763 3 5899999999999999999997 8999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
+||+++|++++|+++..+.+++.++++.++++++++++.....+.... ... .++.++. .
T Consensus 72 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~-~~~~~~~----------------~ 130 (529)
T PRK07867 72 GAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGV-RVINVDS----------------P 130 (529)
T ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCc-eEEEecc----------------c
Confidence 999999999999999999999999999999999999987665432211 111 2222221 1
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
.+.+++..............++++++++|||||||.||+|++||+++..........+ ++..+|++++.+|++|.
T Consensus 131 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~ 205 (529)
T PRK07867 131 AWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-----GLGPDDVCYVSMPLFHS 205 (529)
T ss_pred cHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-----CCCcccEEEEecchhHH
Confidence 2444333221112223345678999999999999999999999999988877766555 67788999999999999
Q ss_pred HHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 279 LDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 279 ~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+++.. +..++..|+++++.+. ++..+++.++++++|++.++|+.+..++......
T Consensus 206 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~----------------------- 262 (529)
T PRK07867 206 NAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERP----------------------- 262 (529)
T ss_pred HHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcc-----------------------
Confidence 99876 4557889999988766 8999999999999999999999988775311000
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccC
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVG 436 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~ 436 (553)
. ...+++|. ++||+.+++.. ..+.+.+|.++++.||+||++..+..... ...+
T Consensus 263 ----------~------------~~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~~~---~~~~ 315 (529)
T PRK07867 263 ----------D------------DADNPLRI-VYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRTPD---TPPG 315 (529)
T ss_pred ----------c------------ccccceEE-EecCCCChHHH-HHHHHHhCCcEEEeecccccccccccCCC---CCCC
Confidence 0 00026774 56888887765 55666779999999999999866543321 2336
Q ss_pred ccCCCCCCeeEEEeecCCCCCCCCCCCC------------CCeEEE-ecCCccccccCChhhhhhhccCCccccCceEEE
Q 008787 437 TAGPVSVYSELRLEEVPEMGYSPLDDPP------------CGEVCV-RGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQI 503 (553)
Q Consensus 437 ~~G~~~~~~~v~i~~~~~~~~~~~~~~~------------~Gei~v-~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~ 503 (553)
++|.+.++ +++++ ++.+ .+++.++ .|||++ +|++++.||+++++.+.+.+.+|||+|||+|++
T Consensus 316 ~~g~~~~~--~~i~~-~~~~-~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~ 391 (529)
T PRK07867 316 ALGPLPPG--VAIVD-PDTG-TECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYR 391 (529)
T ss_pred CcCCCCCC--EEEEE-CCCC-CCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEE
Confidence 78999999 66776 3322 2334445 899999 999999999999999998899999999999999
Q ss_pred ccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 504 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 504 ~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++|++++.||.+|+|++ +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 392 ~~~g~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~ 439 (529)
T PRK07867 392 DADGYAYFAGRLGDWMRV-DGENLGTAPIERILLRYPDATEVAVYAVPD 439 (529)
T ss_pred eCCCcEEEeccccCeEEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeccC
Confidence 999999999999999997 899999999999999999999999999875
No 78
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.8e-55 Score=461.70 Aligned_cols=447 Identities=23% Similarity=0.279 Sum_probs=352.6
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
....++.++|+++++++|++++++.. ..+..+++||+||.++++++|++|.+.|+++||+|+++++|+.++++++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~ 81 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRS-----VEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAW 81 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEee-----ccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Confidence 44579999999999999999999742 1233578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
+||+++|++++|+++..+.+++.++++.++++.++++.+....+.+... ..+....++...+.... .........
T Consensus 82 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~ 156 (542)
T PRK06018 82 YGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIAD-KLPSVERYVVLTDAAHM----PQTTLKNAV 156 (542)
T ss_pred HHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHh-hCCCccEEEEecccccc----cccCccccc
Confidence 9999999999999999999999999999999999999876655543322 12334444444322100 000011233
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHH-HHH-hhchhhhccccCCCCCCcEEEEecChH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIA-TFV-SGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
.+.+++..... ........++++++++|||||||.||+|.+||++++ ... ......+ ++..+|+++...|++
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~ 230 (542)
T PRK06018 157 AYEEWIAEADG-DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-----GTSAADTMLPVVPLF 230 (542)
T ss_pred cHHHHhccCCc-ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-----CCCCCCEEEEecCHH
Confidence 45555543321 222234566789999999999999999999999743 222 2222222 577889999999999
Q ss_pred HHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 277 HILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 277 ~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
|.+++...+.++..|+++++... ++..+++.++++++|++.++|+++..+++......
T Consensus 231 h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~-------------------- 290 (542)
T PRK06018 231 HANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEG-------------------- 290 (542)
T ss_pred HHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccC--------------------
Confidence 99988776778899999888653 78999999999999999999999998875322110
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC---
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE--- 431 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~--- 431 (553)
.++ +++|.+++||+++++++.++|++ ++.++++.||+||++.+++......
T Consensus 291 -----------------~~~--------~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~ 344 (542)
T PRK06018 291 -----------------LKL--------PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFS 344 (542)
T ss_pred -----------------CCc--------ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccc
Confidence 011 38999999999999999999999 8999999999999987665432111
Q ss_pred -------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEE
Q 008787 432 -------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQI 503 (553)
Q Consensus 432 -------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~ 503 (553)
.....+.|+|.+++++++++ +++...+.+.++.|||+++|++++.||++.. ...+ .+|||+|||+|++
T Consensus 345 ~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~ 420 (542)
T PRK06018 345 KLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEILDDDGFFDTGDVATI 420 (542)
T ss_pred cCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEecCCcEEEcCCEEEE
Confidence 01125789999999999999 6666566544568999999999999999832 2223 5789999999999
Q ss_pred ccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 504 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 504 ~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
++||++++.||.+|+|++ +|++++|.+||+++..||+|.+|+|+|.++
T Consensus 421 ~~~g~~~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 468 (542)
T PRK06018 421 DAYGYMRITDRSKDVIKS-GGEWISSIDLENLAVGHPKVAEAAVIGVYH 468 (542)
T ss_pred cCCccEEEEecCCCeEEE-CCEEECHHHHHHHHHhCCcceeEEEEeccC
Confidence 999999999999999996 899999999999999999999999999754
No 79
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=8.7e-55 Score=464.15 Aligned_cols=451 Identities=24% Similarity=0.333 Sum_probs=343.1
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.|+...+..++..+|+++|+++. + .++||.||.++++++|..|.+.|+++||+|+++++|+++++++++||
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~----~-----~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~ 90 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHG----S-----VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGV 90 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 46889999999999999999853 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccc------cccCccEEEEecCCchHHHHHHhhCCc
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR------SAQRLRVMVCFTSLTAEQKEMAVQTGI 195 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (553)
+++|++++|+++..+.+++.++++.++++++++++.......+.... .......++.+................
T Consensus 91 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
T PLN02479 91 PMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGK 170 (567)
T ss_pred HhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcccccccccc
Confidence 99999999999999999999999999999999988765443222110 001112333333211000000000112
Q ss_pred eeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecCh
Q 008787 196 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPL 275 (553)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 275 (553)
+...|.+++...............+++++++|||||||.||+|.+||.++..........+ .+..++++++.+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~ 245 (567)
T PLN02479 171 GAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-----GMNEGAVYLWTLPM 245 (567)
T ss_pred CcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-----CCCCCCEEEEecch
Confidence 3345666655432111111122345677899999999999999999999876554433333 56788999999999
Q ss_pred HHHHHHHHHHH-HHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 276 AHILDRVIEEY-FFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 276 ~~~~g~~~~~~-~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
+|.+++...+. .+..|.++++...++..+++.++++++|++.++|.++..|++......
T Consensus 246 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------- 305 (567)
T PLN02479 246 FHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSET-------------------- 305 (567)
T ss_pred hhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcc--------------------
Confidence 99999765443 456666666655699999999999999999999999998865321000
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccC-----
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFP----- 429 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----- 429 (553)
. ...++++.++++|+++++++.+.+++. +.++++.||+||+++.+.....
T Consensus 306 ----------------~--------~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~ 360 (567)
T PLN02479 306 ----------------I--------LPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
T ss_pred ----------------c--------ccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceecccccc
Confidence 0 001378999999999999999999876 8899999999998654432210
Q ss_pred ----C-CccccCccCCCCCCee-EEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEE
Q 008787 430 ----D-EMCMVGTAGPVSVYSE-LRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQI 503 (553)
Q Consensus 430 ----~-~~~~~~~~G~~~~~~~-v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~ 503 (553)
. ......+.|.+.++.+ +++++.+.+...+.+.++.|||+++|++++.||+++++.+.+.|.+|||+|||+|++
T Consensus 361 ~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~ 440 (567)
T PLN02479 361 SLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVK 440 (567)
T ss_pred ccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCCceecceeEEE
Confidence 0 0111135677888875 788773233333332236899999999999999999999999999999999999999
Q ss_pred ccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 504 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 504 ~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|++|+++++||.+|+|++ +|++++|.+||++|.+||.|.+|+|+|.+.
T Consensus 441 ~~~g~l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 488 (567)
T PLN02479 441 HPDGYIEIKDRSKDIIIS-GGENISSLEVENVVYTHPAVLEASVVARPD 488 (567)
T ss_pred cCCccEEEeccccceEEe-CCEEEcHHHHHHHHHhCcccceeeEEeccc
Confidence 999999999999999996 899999999999999999999999999864
No 80
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-54 Score=460.66 Aligned_cols=421 Identities=19% Similarity=0.211 Sum_probs=335.1
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCchhHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl-~~gd~V~l~~~n~~~~~~~~lA 120 (553)
.++.++|..++ .|+++|+++. + ..+||.||.++++++|..|.+.|+ ++||+|+++++|+++++++++|
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~----~-----~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA 71 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG----D-----RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAA 71 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 56888887764 7999999864 3 479999999999999999999999 8999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|++|..+.+++.++++.+++++++++......+.+.. .+... ++.++.. .+
T Consensus 72 ~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~-~i~~~~~----------------~~ 131 (540)
T PRK13388 72 AALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD---LPGVR-VLDVDTP----------------AY 131 (540)
T ss_pred HHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc---ccCce-EEEccch----------------hh
Confidence 9999999999999999999999999999999999887655442221 11222 2222211 12
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.+++..... ..+.....++++++++|||||||.||+|.++|.++..........+ ++..+|+++..+|++|.++
T Consensus 132 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 205 (540)
T PRK13388 132 AELVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-----GLTRDDVCYVSMPLFHSNA 205 (540)
T ss_pred hhhhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-----CCCCCCEEEEeeCchhhcc
Confidence 333321111 1122235678999999999999999999999999988777666655 6788999999999999998
Q ss_pred HHHH-HHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 281 RVIE-EYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 281 ~~~~-~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
+... ..++..|+++++.+. ++..+++.++++++|++..+|..+..++.....
T Consensus 206 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~-------------------------- 259 (540)
T PRK13388 206 VMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPER-------------------------- 259 (540)
T ss_pred hHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC--------------------------
Confidence 8754 457889999988765 899999999999999999999998876531000
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCcc
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTA 438 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~ 438 (553)
.. ....+++.+ + |+++.++....+.+.++.++++.||+||++.++.... ....+++
T Consensus 260 ----------~~---------~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~---~~~~~~v 315 (540)
T PRK13388 260 ----------PD---------DADNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVREP---GTPPGSI 315 (540)
T ss_pred ----------cc---------ccccceEEE-E-CCCCCHHHHHHHHHHhCCceecccccccccceeecCC---CCCCCCC
Confidence 00 000256643 3 5667888888888888999999999999987665432 1234789
Q ss_pred CCCCCCeeEE-----------EeecCCCCCCCCCCCCCCeEEEe-cCCccccccCChhhhhhhccCCccccCceEEEccC
Q 008787 439 GPVSVYSELR-----------LEEVPEMGYSPLDDPPCGEVCVR-GKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN 506 (553)
Q Consensus 439 G~~~~~~~v~-----------i~~~~~~~~~~~~~~~~Gei~v~-~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d 506 (553)
|+|++|+++. ++| +++....++++.|||+++ |++++.||+++++.+.+.|.+|||+|||+|++|+|
T Consensus 316 G~p~~g~~i~~~~~~~~~~~~~~d--~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~d 393 (540)
T PRK13388 316 GRGAPGVAIYNPETLTECAVARFD--AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDAD 393 (540)
T ss_pred CCCCCCcEEEcCCCCccccceecc--CccccccCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEcCC
Confidence 9999997653 122 112122234578999998 99999999999999999898999999999999999
Q ss_pred CcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 507 GVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 507 G~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|++++.||.+|+|++ +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 394 g~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~ 438 (540)
T PRK13388 394 GWIYFAGRTADWMRV-DGENLSAAPIERILLRHPAINRVAVYAVPD 438 (540)
T ss_pred CcEEEeccCCceEEE-CCEEeCHHHHHHHHHhCCCceEEEEEEccC
Confidence 999999999999997 899999999999999999999999999865
No 81
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.1e-54 Score=456.02 Aligned_cols=435 Identities=22% Similarity=0.226 Sum_probs=355.4
Q ss_pred cccHHHHHHHH-HHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMS-VQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~-a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
.++..+++.++ ++.+||++|++.. + ..+||.||.++++++|.+|.+.|+++|++|+++++|+.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~~~a~~~~----~-----~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNVVEGRGGKTAFIDD----I-----SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHHhcccCCceEEEeC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 46677888887 6779999999753 2 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
||+++|++++|+++..+.+++.++++.+++++++++......+.+... ..+....++..+.... ....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~ 141 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALG-KSPHLEHRVVVGRPEA-----------GEVQ 141 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHh-cCCCccEEEEeCCCCc-----------cccc
Confidence 999999999999999999999999999999999999876655433221 2233344444433211 1224
Q ss_pred HHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhc-hhhhccccCCCCCCcEEEEecChHHH
Q 008787 200 WDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGV-DLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
+.++..... .........++++++++|||||||.||+|++||+++...+... ...+ ++..+|+++..+|++|.
T Consensus 142 ~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~ 215 (508)
T TIGR02262 142 LAELLATES-EQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-----GIREDDVVFSAAKLFFA 215 (508)
T ss_pred HHHHhhcCC-CccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-----CCCCCCEEEEcCchHHH
Confidence 444443221 1222234467899999999999999999999999998776542 2222 67788999999999999
Q ss_pred HHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 008787 279 LDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 355 (553)
Q Consensus 279 ~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (553)
+++.. +..++..|+++++.+. ++..+++.++++++|.+.++|.++..++....
T Consensus 216 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~------------------------ 271 (508)
T TIGR02262 216 YGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPN------------------------ 271 (508)
T ss_pred HHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcc------------------------
Confidence 99865 5557889999888765 79999999999999999999998877643100
Q ss_pred HhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCcccc
Q 008787 356 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMV 435 (553)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~ 435 (553)
... ..+.++|.+++||+++++++.+.|.+.+++++++.||+||++.++..+..... ..
T Consensus 272 -------------~~~--------~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~-~~ 329 (508)
T TIGR02262 272 -------------LPA--------EDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDV-RY 329 (508)
T ss_pred -------------ccc--------cccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccCC-CC
Confidence 000 00137999999999999999999999999999999999999986665433322 33
Q ss_pred CccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecc
Q 008787 436 GTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRK 515 (553)
Q Consensus 436 ~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~ 515 (553)
+++|.|.+++++++++ +++ .++++|+.|||+++|+.++.||+++++.+...|.++||+|||+|++++||.++++||.
T Consensus 330 ~~~G~~~~g~~v~i~d-~~~--~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~ 406 (508)
T TIGR02262 330 GTSGKPVPGYRLRLVG-DGG--QDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRT 406 (508)
T ss_pred CCcCCCCCCcEEEEEC-CCC--CCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcCCccEEEeccc
Confidence 6899999999999999 555 4556678999999999999999999999999899999999999999999999999999
Q ss_pred cCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 516 KNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 516 ~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|+|++ +|.+++|.+||+.|.+||+|.+++|+|.++
T Consensus 407 ~d~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~ 442 (508)
T TIGR02262 407 DDMLKV-SGIYVSPFEIESALIQHPAVLEAAVVGVED 442 (508)
T ss_pred cceeee-CCEEECHHHHHHHHHhCCCeeEEEEEeccc
Confidence 999997 799999999999999999999999999653
No 82
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.4e-54 Score=461.01 Aligned_cols=451 Identities=24% Similarity=0.327 Sum_probs=352.4
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~-~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..++.++|.++++++|+++|+++. + +.+||.||.+++.++|..|. +.|+++||+|+++++|++++++++|
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF----G-----KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC----C-----ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 357999999999999999999863 3 58999999999999999997 6899999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCc------hHH-----HH
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLT------AEQ-----KE 188 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----~~ 188 (553)
||+++|++++|++|..+.+++.++++.++++++++++.....+....... ....++...... ... ..
T Consensus 95 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--PVKQVITTGLGDMLGFPKAALVNFVVKY 172 (560)
T ss_pred HHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--CccEEEEechhhhcccccchhhhhhhhh
Confidence 99999999999999999999999999999999999887655443322211 122222221000 000 00
Q ss_pred H----HhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCC
Q 008787 189 M----AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT 264 (553)
Q Consensus 189 ~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~ 264 (553)
. ..........+.+..........+......+++++++|||||||.||+|.+||.++...+......+.... .+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~ 251 (560)
T PRK08751 173 VKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTG-KLE 251 (560)
T ss_pred hhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhcccc-ccC
Confidence 0 00000122334444433222222233456789999999999999999999999999877665443331110 122
Q ss_pred C-CcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchH
Q 008787 265 V-DDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPL 340 (553)
Q Consensus 265 ~-~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~ 340 (553)
. .+.+++..|++|.+++.. .+.++..|+++++... ++..+++.++++++|++.++|.++..+.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---------- 321 (560)
T PRK08751 252 EGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTP---------- 321 (560)
T ss_pred CCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCc----------
Confidence 3 357788999999999865 4456667777666543 8899999999999999999999998876411
Q ss_pred HHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccC
Q 008787 341 RRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTET 420 (553)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~ 420 (553)
..+..++ +++|.+++||+++++.+.+.+++.+++.+++.||+||+
T Consensus 322 ---------------------------~~~~~~l--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 366 (560)
T PRK08751 322 ---------------------------GFDQIDF--------SSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTET 366 (560)
T ss_pred ---------------------------CcCCcch--------hhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccC
Confidence 0111122 27999999999999999999999889999999999999
Q ss_pred CCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCc
Q 008787 421 CGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGD 499 (553)
Q Consensus 421 g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD 499 (553)
+..++.+........+++|.|.+++++++++ +++. +++.++.|||+++|+.++.||+++++.+.+.+ .+|||+|||
T Consensus 367 ~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD 443 (560)
T PRK08751 367 SPAACINPLTLKEYNGSIGLPIPSTDACIKD-DAGT--VLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGD 443 (560)
T ss_pred CCceecccccccccCCCcCccCCCceEEEEC-CCCC--CCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccc
Confidence 8876655443334457899999999999999 5554 45567899999999999999999999998887 679999999
Q ss_pred eEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 500 IGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 500 ~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|+++++|++++.||.+|+|++ +|++++|.+||++|..||+|.+|+|+|.++
T Consensus 444 ~~~~~~~g~l~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~ 495 (560)
T PRK08751 444 IARMDEQGFVYIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVLEVAAVGVPD 495 (560)
T ss_pred eEEEcCCceEEEEeechhheeE-CCEEEcHHHHHHHHHhCcCeeeeEEEecCC
Confidence 9999999999999999999997 799999999999999999999999999764
No 83
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-54 Score=460.06 Aligned_cols=449 Identities=23% Similarity=0.334 Sum_probs=347.3
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..+++.++|..+++++|+++|+++. + +.+||.||.+++.++|++|.+.|+++||+|+++++|+.++++++|
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFL----G-----KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEec----C-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 3468999999999999999999864 3 579999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCc--h--HH------HH-
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLT--A--EQ------KE- 188 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~------~~- 188 (553)
||+++|++++|++|..+.+++.++++.++++++++++.....+...... .....++...... . .. ..
T Consensus 93 A~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSA--TKIEHVIVTRIADFLPFPKNLLYPFVQKK 170 (563)
T ss_pred HHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchh--hccceeEEeccccccccccccccchhhcc
Confidence 9999999999999999999999999999999999987654433221110 1111222110000 0 00 00
Q ss_pred ---HHhh--CCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCC
Q 008787 189 ---MAVQ--TGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM 263 (553)
Q Consensus 189 ---~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~ 263 (553)
.... .......|..+.... ...........+++++++|||||||.||+|.+||.++..........+ ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~----~~~ 245 (563)
T PRK06710 171 QSNLVVKVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL----YNC 245 (563)
T ss_pred cccccccccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc----cCC
Confidence 0000 000000122221111 111111112357899999999999999999999999875543222211 022
Q ss_pred -CCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchH
Q 008787 264 -TVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPL 340 (553)
Q Consensus 264 -~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~ 340 (553)
..++++++++|++|.+|+.. ...++..|+++++.+. ++..+++.++++++|++.++|+++..+++...
T Consensus 246 ~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------- 316 (563)
T PRK06710 246 KEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPL--------- 316 (563)
T ss_pred CCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCc---------
Confidence 34568899999999999865 4457889999888766 89999999999999999999999998764210
Q ss_pred HHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccC
Q 008787 341 RRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTET 420 (553)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~ 420 (553)
.....+ +++|.+++||+++++++.+++++.++.++++.||+||+
T Consensus 317 ----------------------------~~~~~~--------~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 360 (563)
T PRK06710 317 ----------------------------LKEYDI--------SSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTES 360 (563)
T ss_pred ----------------------------cccCCh--------hhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccC
Confidence 000111 27999999999999999999999889999999999999
Q ss_pred CCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCce
Q 008787 421 CGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDI 500 (553)
Q Consensus 421 g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~ 500 (553)
+.++...........+++|++.++..+++++ ++++ .+++.|+.|||+++|+.++.||+++++.+...+.+|||+|||+
T Consensus 361 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~ 438 (563)
T PRK06710 361 SPVTHSNFLWEKRVPGSIGVPWPDTEAMIMS-LETG-EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDV 438 (563)
T ss_pred ccccccCcccccccCCccCCCCCCCeEEEEE-CCCC-ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccce
Confidence 8765544332333347899999999999998 4433 4566778999999999999999999999998889999999999
Q ss_pred EEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 501 GQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 501 g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|++++||.+++.||.+|+|++ +|.+++|.+||++|.+||.|.+|+|+|.++
T Consensus 439 ~~~~~~g~~~~~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~ 489 (563)
T PRK06710 439 GYMDEDGFFYVKDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQEVVTIGVPD 489 (563)
T ss_pred EEEcCCCcEEEeeccccEEEE-CCEEECHHHHHHHHHhCcceeeEEEEcccc
Confidence 999999999999999999997 899999999999999999999999999764
No 84
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-54 Score=454.79 Aligned_cols=410 Identities=23% Similarity=0.293 Sum_probs=332.4
Q ss_pred HHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEE
Q 008787 49 SMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLIC 128 (553)
Q Consensus 49 ~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 128 (553)
+.+++.+|+++|+.+. .++ +.+||.||.+.+.++|..|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~--~~~-----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 74 (488)
T PRK09088 2 AFHARLQPQRLAAVDL--ALG-----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIY 74 (488)
T ss_pred chhhhhCCCceEEEec--CCC-----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 4567889999998752 022 589999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhccc
Q 008787 129 VPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK 208 (553)
Q Consensus 129 v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 208 (553)
+|+++..+++++.++++.++++++++++....... . ...++++.....
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~---------------------~~~~~~~~~~~~ 122 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------D---------------------VEDLAAFIASAD 122 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------c---------------------ccchhhhhhhcc
Confidence 99999999999999999999999999865432100 0 011111111110
Q ss_pred c-cccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHH-HHH
Q 008787 209 V-NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEY 286 (553)
Q Consensus 209 ~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 286 (553)
. ..........+++++++|||||||.||++.+||+++...+..+.... ....++++++.+|++|.+|+.. +..
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~ 197 (488)
T PRK09088 123 ALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-----RVDAHSSFLCDAPMFHIIGLITSVRP 197 (488)
T ss_pred ccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEecchHHHHHHHHHHHH
Confidence 0 01112234567899999999999999999999999987776655444 5678899999999999999876 555
Q ss_pred HHHcCcEEEEecC-ChHHHHHHhh--hhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcC
Q 008787 287 FFRRGASVGYYHG-DLNALRDDLM--ELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQR 363 (553)
Q Consensus 287 ~l~~g~~~~~~~~-~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (553)
++..|+++++.++ ++..++..+. ++++|+++++|.++..+.+...
T Consensus 198 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~-------------------------------- 245 (488)
T PRK09088 198 VLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPG-------------------------------- 245 (488)
T ss_pred HHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcC--------------------------------
Confidence 7888999888766 7888888886 4899999999999988753100
Q ss_pred CcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCC--CccccCccCCC
Q 008787 364 EASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPD--EMCMVGTAGPV 441 (553)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~--~~~~~~~~G~~ 441 (553)
.+...+ +++|.+++||++++.+..+.+.+. |+++++.||+||++.+....... .....+++|.|
T Consensus 246 -----~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~ 311 (488)
T PRK09088 246 -----FDAAAL--------RHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIP 311 (488)
T ss_pred -----cCcccc--------ccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcccccccCCccccC
Confidence 000011 389999999999999988887765 89999999999998755432211 12244789999
Q ss_pred CCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecccCcee
Q 008787 442 SVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIK 520 (553)
Q Consensus 442 ~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~ 520 (553)
.|++++++++ +++. +++.|+.|||+|+|++++.||+++++.+++.+ .+|||+|||+|++|++|.+++.||.+|+|+
T Consensus 312 ~~~~~~~i~d-~~~~--~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~ 388 (488)
T PRK09088 312 TPTVQTRVVD-DQGN--DCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFI 388 (488)
T ss_pred CCCcEEEEEC-CCCC--CCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEE
Confidence 9999999998 5543 45567899999999999999999999998887 689999999999999999999999999999
Q ss_pred cCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 521 ISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 521 ~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+ +|++++|.+||++|..||.|.+++|+|.++
T Consensus 389 ~-~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~ 419 (488)
T PRK09088 389 S-GGENVYPAEIEAVLADHPGIRECAVVGMAD 419 (488)
T ss_pred e-CCEEECHHHHHHHHHhCCCcceEEEEeCCC
Confidence 6 899999999999999999999999999764
No 85
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-54 Score=456.41 Aligned_cols=420 Identities=21% Similarity=0.237 Sum_probs=338.2
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.+.|..+++++|+++|+++. + +.+||.||.+++.++|++|++.|+++||+|+++++|++++++++||
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~~----~-----~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la 104 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIIDD----D-----GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFA 104 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEeC----C-----CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 578999999999999999999853 2 3799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++.++.+++.++++.++++.+++++.....+.... ..++.++....
T Consensus 105 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~---------------- 161 (516)
T PRK13383 105 VGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD-------DAVAVIDPATA---------------- 161 (516)
T ss_pred HHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh-------cceEEeccchh----------------
Confidence 9999999999999999999999999999999999887655442211 11222221100
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.. . . ....+...++.++++|||||||.||+|++||...... ......+. ..++..++++++.+|++|.+|
T Consensus 162 -~~-~---~--~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~-~~~~~~~~--~~~~~~~d~~~~~~pl~h~~g 231 (516)
T PRK13383 162 -GA-E---E--SGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAV-GVWVTILD--RTRLRTGSRISVAMPMFHGLG 231 (516)
T ss_pred -hh-h---c--CCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhh-hhHHhHHh--hhccCCCCeEEEecCCcchhh
Confidence 00 0 0 0011123456679999999999999999999743211 11111111 115678899999999999999
Q ss_pred HHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhcc
Q 008787 281 RVIEEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMG 359 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (553)
+...+.++..|+++++... +++.+++.++++++|.+.++|.++..|.+.......
T Consensus 232 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~------------------------ 287 (516)
T PRK13383 232 LGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRA------------------------ 287 (516)
T ss_pred HHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccc------------------------
Confidence 9877778899999887765 899999999999999999999999888642111000
Q ss_pred CCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccC
Q 008787 360 YKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAG 439 (553)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G 439 (553)
. ...+++|.+++||+++++++.+++.+.++..+++.||+||++..+...........+++|
T Consensus 288 -----------~--------~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G 348 (516)
T PRK13383 288 -----------R--------NPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVG 348 (516)
T ss_pred -----------c--------CCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCccc
Confidence 0 001389999999999999999999999999999999999998766544433333457899
Q ss_pred CCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCce
Q 008787 440 PVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLI 519 (553)
Q Consensus 440 ~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i 519 (553)
+|+|+++++|++ +++ .+++.|+.|||+++|+.++.+|++++. +.+.+|||+|||+|++|++|++++.||.+|+|
T Consensus 349 ~~~~~~~~~i~d-~~~--~~~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i 422 (516)
T PRK13383 349 KPVAGCPVRILD-RNN--RPVGPRVTGRIFVGGELAGTRYTDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMI 422 (516)
T ss_pred CCCCCcEEEEEC-CCC--CCCCCCCceEEEEecCcccccccCCch---hheecCceecceeEEEcCCccEEEeccccceE
Confidence 999999999999 554 355567899999999999999998753 33468999999999999999999999999999
Q ss_pred ecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 520 KISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 520 ~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
++ +|++++|.+||++|.+||.|.+++|+|.++
T Consensus 423 ~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~ 454 (516)
T PRK13383 423 IS-GGENVYPRAVENALAAHPAVADNAVIGVPD 454 (516)
T ss_pred EE-CCEEECHHHHHHHHHhCCCeeEEEEEeccc
Confidence 97 899999999999999999999999999764
No 86
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=4.2e-55 Score=450.01 Aligned_cols=403 Identities=31% Similarity=0.470 Sum_probs=313.2
Q ss_pred HHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCE
Q 008787 48 FSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 127 (553)
Q Consensus 48 l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 127 (553)
|+++|+++||++|+++. +. +.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDD---EG-----RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEET---TT-----EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEEC---CC-----EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 57899999999999861 12 79999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCChhHHHHHHhhcCceEEEE----cchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHH
Q 008787 128 CVPLYDTLGPGAVNFILDHAEIDFVFV----QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEF 203 (553)
Q Consensus 128 ~v~l~~~~~~~~l~~~l~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 203 (553)
++|+++.++.+++.++++.++++++|+ +......+....... .....++.++..... ....+
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------~~~~~ 138 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQE-DPSSSIIILDRDDLP-------------KKEAL 138 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTS-TTTEEEEEESHSSCT-------------TCHHH
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhccc-ccccccccccccccc-------------ccccc
Confidence 999999999999999999999999997 222222222222111 223444444432210 00111
Q ss_pred HhcccccccccCC-CCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHH-
Q 008787 204 LHLGKVNEMEILP-PQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR- 281 (553)
Q Consensus 204 ~~~~~~~~~~~~~-~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~- 281 (553)
.......... .. ..++++++++|||||||.||+|.+||+++++.+..+. +... .++. |++++.+|++|.+|+
T Consensus 139 ~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~-~~~~--d~~l~~~p~~~~~g~~ 212 (417)
T PF00501_consen 139 KSASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEY-FGLG--DRILSFLPLSHIFGLI 212 (417)
T ss_dssp HHHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHT-TTTT--TEEEESS-TTSHHHHH
T ss_pred cccccccccc-cCCCCccceeEeeccccccccccccccccccccccccccc--cccc-cccC--ceEEeecccccccccc
Confidence 1100000000 00 0568999999999999999999999999999987754 1111 1223 599999999999999
Q ss_pred HHHHHHHHcCcEEEEecC-C---hHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh
Q 008787 282 VIEEYFFRRGASVGYYHG-D---LNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN 357 (553)
Q Consensus 282 ~~~~~~l~~g~~~~~~~~-~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (553)
..++.++..|+++++++. . ++.+++.++++++|+++++|.++..|++..+.. ...
T Consensus 213 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~~-------------------- 271 (417)
T PF00501_consen 213 SALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-TKI-------------------- 271 (417)
T ss_dssp HHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HHG--------------------
T ss_pred ccccccccccccccccccccccccccchhccccccccccccccccccccccccccc-ccc--------------------
Confidence 568889999999999987 2 577899999999999999999999987521110 000
Q ss_pred ccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCC-ceEeeeccccCCCceeecc-CCCcccc
Q 008787 358 MGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCF-PDEMCMV 435 (553)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~YG~tE~g~~~~~~~-~~~~~~~ 435 (553)
... .++++|.+++||+++++++.+++++.++. ++++.||+||++.+++... .......
T Consensus 272 ------------~~~--------~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 331 (417)
T PF00501_consen 272 ------------SKK--------DLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKP 331 (417)
T ss_dssp ------------TTT--------TGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSST
T ss_pred ------------ccc--------ccccccccccccccCChhhccccccccccccceecccccccceeeeccccccccccc
Confidence 000 11379999999999999999999999987 9999999999999988664 2333345
Q ss_pred CccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccC-CccccCceEEEccCCcEEEEec
Q 008787 436 GTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKIIDR 514 (553)
Q Consensus 436 ~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~g~~~~dG~l~~~GR 514 (553)
+++|.|+|+++++|+| ++++ .++++|+.|||+|+||+++.||+++|+.+.+.|.+ |||+|||+|++|+||+|+++||
T Consensus 332 ~~~G~~~~~~~~~ivd-~~~~-~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR 409 (417)
T PF00501_consen 332 GSVGKPLPGVEVKIVD-PNTG-EPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGR 409 (417)
T ss_dssp TSEBEESTTEEEEEEC-TTTS-SBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEE
T ss_pred cccccccccccccccc-cccc-ccccccccccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEe
Confidence 7899999999999999 5422 44567799999999999999999999999999954 8999999999999999999999
Q ss_pred ccCceec
Q 008787 515 KKNLIKI 521 (553)
Q Consensus 515 ~~d~i~~ 521 (553)
.+|+|++
T Consensus 410 ~~~~i~~ 416 (417)
T PF00501_consen 410 SDDMIKV 416 (417)
T ss_dssp GSCEEEE
T ss_pred eCCEEEe
Confidence 9999996
No 87
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-54 Score=464.99 Aligned_cols=435 Identities=19% Similarity=0.247 Sum_probs=339.3
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
....++.+.|.++++++|+++|+++. + +.+||+||.++++++|..|.+.|+++||+|+++++|++++++++
T Consensus 34 ~~~~tl~~~l~~~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~ 104 (600)
T PRK08279 34 DSKRSLGDVFEEAAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAW 104 (600)
T ss_pred CCcccHHHHHHHHHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999999999999999999874 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
|||+++|++++++++.++.+++.++++.++++++|++.+....+.+..... .....++..++.... ...
T Consensus 105 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~ 173 (600)
T PRK08279 105 LGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADL-ARPPRLWVAGGDTLD----------DPE 173 (600)
T ss_pred HHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhh-cccceEEEecCcccc----------ccc
Confidence 999999999999999999999999999999999999987766553322211 122223332221100 011
Q ss_pred eHHHHHhccccc----ccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecC
Q 008787 199 SWDEFLHLGKVN----EMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLP 274 (553)
Q Consensus 199 ~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 274 (553)
.+.++....... .........+++++|+|||||||.||+|.+||+++...+..+...+ .+..++++++.+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~l~~~d~~l~~~p 248 (600)
T PRK08279 174 GYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-----RLTPDDVLYCCLP 248 (600)
T ss_pred cHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-----CCCCCcEEEEecC
Confidence 222322211111 1122334678999999999999999999999999999888776665 7888999999999
Q ss_pred hHHHHHHHHHH-HHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 008787 275 LAHILDRVIEE-YFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYK 352 (553)
Q Consensus 275 ~~~~~g~~~~~-~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
++|.+|+...+ .++..|+++++.+. ++..+++.++++++|++.++|.++..+++.......
T Consensus 249 l~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~----------------- 311 (600)
T PRK08279 249 LYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTD----------------- 311 (600)
T ss_pred chhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccc-----------------
Confidence 99999998654 46778888888776 899999999999999999999999887642110000
Q ss_pred HHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCC-ceEeeeccccCCCceeeccCCC
Q 008787 353 LAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDE 431 (553)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~YG~tE~g~~~~~~~~~~ 431 (553)
...++|.+ +|+.+++++.+.+.+.++. .+++.||+||++.... ...
T Consensus 312 ----------------------------~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~-~~~-- 358 (600)
T PRK08279 312 ----------------------------RDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFI-NVF-- 358 (600)
T ss_pred ----------------------------cCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeec-ccC--
Confidence 00266654 4777999999999998876 5999999999875433 221
Q ss_pred ccccCccCCCCC----CeeE---------EEeecCCCCCCCCCCCCCCeEE--EecCCccccccCChhhhhhhc------
Q 008787 432 MCMVGTAGPVSV----YSEL---------RLEEVPEMGYSPLDDPPCGEVC--VRGKTLFSGYYKNPDLTRESI------ 490 (553)
Q Consensus 432 ~~~~~~~G~~~~----~~~v---------~i~~~~~~~~~~~~~~~~Gei~--v~~~~~~~gy~~~~~~~~~~~------ 490 (553)
...+++|++.+ +..+ .+.+ .++....++.|+.|||+ +.|+.++.|| ++++.+.+.+
T Consensus 359 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~ 435 (600)
T PRK08279 359 -NFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFK 435 (600)
T ss_pred -CCCcccccccccccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccC
Confidence 22356776655 3322 2222 22333456678899998 7799999999 8888887765
Q ss_pred -cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 491 -IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 491 -~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.++||+|||+|++|+||++++.||.+|+|++ +|++|+|.|||++|.+||+|.+|+|+|+++
T Consensus 436 ~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~-~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~ 497 (600)
T PRK08279 436 KGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRW-KGENVATTEVENALSGFPGVEEAVVYGVEV 497 (600)
T ss_pred CCCceEeecceEEEcCCccEEEecccCCeEEE-CCcccCHHHHHHHHhcCCCcceEEEEEeec
Confidence 2579999999999999999999999999997 899999999999999999999999999763
No 88
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-54 Score=458.46 Aligned_cols=450 Identities=21% Similarity=0.269 Sum_probs=349.2
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
...++.+.|..+++.+|+++|+.+. + +.+||.||.+++.++|.+|.++|+++|++|+++++|+++++++++
T Consensus 31 ~~~~l~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 101 (567)
T PRK06178 31 GERPLTEYLRAWARERPQRPAIIFY----G-----HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFF 101 (567)
T ss_pred CcccHHHHHHHHHHHCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHH
Confidence 3468999999999999999999864 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCch--HHHHHHhh-----
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA--EQKEMAVQ----- 192 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----- 192 (553)
||+++|++++|++|..+.+++.++++.++++++++++...+.+.+..... ....++....... ........
T Consensus 102 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 179 (567)
T PRK06178 102 GILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--SLRHVIVTSLADVLPAEPTLPLPDSLRA 179 (567)
T ss_pred HHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--CcceEEEecccccccccccccccccccc
Confidence 99999999999999999999999999999999999988766554332211 2233332221110 00000000
Q ss_pred CCceeeeHHHHHhccc--ccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEE
Q 008787 193 TGIKPYSWDEFLHLGK--VNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYL 270 (553)
Q Consensus 193 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (553)
.......+.++..... ...........+++++++|||||||.||+|.+||.++........... ..+..+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~----~~~~~~d~~l 255 (567)
T PRK06178 180 PRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA----VVGGEDSVFL 255 (567)
T ss_pred ccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh----ccCCCCcEEE
Confidence 0000011212222111 111122345678999999999999999999999999887655433221 1467889999
Q ss_pred EecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 008787 271 SFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDAL 348 (553)
Q Consensus 271 ~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (553)
+.+|++|.+|+.. ++.++..|+++++.++ ++..++..++++++|.+.++|..+..+.+...
T Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~----------------- 318 (567)
T PRK06178 256 SFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR----------------- 318 (567)
T ss_pred EecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC-----------------
Confidence 9999999999864 6668999999999886 89999999999999999999998887653100
Q ss_pred HHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEE--EcCCCCCHHHHHHHHHhcCCceEe-eeccccCCCcee
Q 008787 349 YKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVI--SGGAPLSTEVEEFLRVTCCAFLVQ-GYGLTETCGPTT 425 (553)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~--~gG~~l~~~~~~~~~~~~~~~i~~-~YG~tE~g~~~~ 425 (553)
....++ ++++.+. ++++.+++++.+.+++.+|..++. .||+||++....
T Consensus 319 --------------------~~~~~l--------~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~ 370 (567)
T PRK06178 319 --------------------FAEYDL--------SSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDT 370 (567)
T ss_pred --------------------CCCCCc--------chheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccce
Confidence 000111 2566654 446899999999999988877765 799999886654
Q ss_pred eccCCC------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCc
Q 008787 426 VCFPDE------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGD 499 (553)
Q Consensus 426 ~~~~~~------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 499 (553)
...... ...+.++|.|+||++++++| ++.+ .+++.|+.|||+++|++++.||+++++.+...+.+|||+|||
T Consensus 371 ~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d-~~~~-~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGD 448 (567)
T PRK06178 371 FTAGFQDDDFDLLSQPVFVGLPVPGTEFKICD-FETG-ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGD 448 (567)
T ss_pred eccccccCccccccCCcccccccCCcEEEEEc-CCCC-CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecc
Confidence 432111 12346789999999999998 4332 445577899999999999999999999998888899999999
Q ss_pred eEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 500 IGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 500 ~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+|++++||+++++||.+|+|++ +|++++|.+||+++.++|+|.+++|+|.++
T Consensus 449 l~~~~~~g~l~i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~ 500 (567)
T PRK06178 449 IGKIDEQGFLHYLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVLGSAVVGRPD 500 (567)
T ss_pred eEEEecCCeEEEEecccccEEE-CCEEECHHHHHHHHHhCCCeeEEEEEcCcC
Confidence 9999999999999999999997 899999999999999999999999999764
No 89
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-53 Score=455.37 Aligned_cols=450 Identities=22% Similarity=0.305 Sum_probs=349.6
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
+.++.++|..+++++|+++|+++. + +.+||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 92 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM----G-----EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALF 92 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC----C-----ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 467999999999999999999853 3 479999999999999999984 899999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchH--HHHH--------
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAE--QKEM-------- 189 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------- 189 (553)
||+++|++++|+++..+.+++.++++.+++++++++......+.+.... .....++........ ....
T Consensus 93 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (560)
T PRK08974 93 GILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFK--TPVKHVILTRMGDQLSTAKGTLVNFVVKY 170 (560)
T ss_pred HHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhh--cCcceEEEecccccccccccccccchhhh
Confidence 9999999999999999999999999999999999887654433221111 111111111100000 0000
Q ss_pred -----HhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCC
Q 008787 190 -----AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMT 264 (553)
Q Consensus 190 -----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~ 264 (553)
.........++.+.................+++++++|||||||.||+|.++|.++..........+.. ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~~ 248 (560)
T PRK08974 171 IKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGP--LLHP 248 (560)
T ss_pred cccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhcc--ccCC
Confidence 000000112222222222111112223467899999999999999999999999998766543322210 0123
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHH
Q 008787 265 VDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLR 341 (553)
Q Consensus 265 ~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~ 341 (553)
..+.++..+|++|.+++.. .+.++..|+++++... ++..+++.++++++|.+.++|+++..|.+....
T Consensus 249 ~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--------- 319 (560)
T PRK08974 249 GKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEF--------- 319 (560)
T ss_pred CccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCc---------
Confidence 4567889999999999765 5556788888776643 888999999999999999999999988642100
Q ss_pred HHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCC
Q 008787 342 RRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETC 421 (553)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g 421 (553)
...++ +++|.+++||+++++.+.+.|++.+|.++++.||+||++
T Consensus 320 ----------------------------~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~ 363 (560)
T PRK08974 320 ----------------------------QELDF--------SSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECS 363 (560)
T ss_pred ----------------------------ccCCc--------cceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccC
Confidence 00111 389999999999999999999998899999999999998
Q ss_pred CceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceE
Q 008787 422 GPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIG 501 (553)
Q Consensus 422 ~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g 501 (553)
..+..+........+++|.|+|++++++++ +++ .+++.|+.|||+++|+.++.||+++++.+...|.+|||+|||+|
T Consensus 364 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~ 440 (560)
T PRK08974 364 PLVSVNPYDLDYYSGSIGLPVPSTEIKLVD-DDG--NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIA 440 (560)
T ss_pred ceeeccCCCCcccCCccccCcCCCEEEEEC-CCC--CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEE
Confidence 877665544434457899999999999999 554 45567799999999999999999999999888889999999999
Q ss_pred EEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 502 QILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 502 ~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++++|+++++||.+|+|++ +|.+++|.+||++|.+||+|.+++|+|.++
T Consensus 441 ~~~~~g~l~i~GR~~d~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~ 490 (560)
T PRK08974 441 VMDEEGFLRIVDRKKDMILV-SGFNVYPNEIEDVVMLHPKVLEVAAVGVPS 490 (560)
T ss_pred EEcCCceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeeec
Confidence 99999999999999999997 799999999999999999999999998764
No 90
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-53 Score=450.82 Aligned_cols=443 Identities=25% Similarity=0.311 Sum_probs=336.9
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
+++.+.|.+.++.+|+++|+++. + ..+||.||.+++.++|.+|.+.|+++||+|+++++|++++++++|||
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~----~-----~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~ 88 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG----D-----RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGV 88 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC----C-----eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 57889999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHH
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 201 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (553)
+++|++++|+++..+.+++..+++.++++.++++......+.+.... .+... .+.+...... ..........++.
T Consensus 89 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~ 163 (545)
T PRK08162 89 PMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALAL-LPGPK-PLVIDVDDPE---YPGGRFIGALDYE 163 (545)
T ss_pred HHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhh-CCCCc-eEEEecCccc---cccCCCcccccHH
Confidence 99999999999999999999999999999999998876655333211 11111 1222111100 0000111233566
Q ss_pred HHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHH
Q 008787 202 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDR 281 (553)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 281 (553)
+++...............+++++++|||||||.||+|+++|+++...+......+ .+..++++++.+|++|.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~~~ 238 (545)
T PRK08162 164 AFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-----GMPKHPVYLWTLPMFHCNGW 238 (545)
T ss_pred HHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeeEeccCcHhhhhH
Confidence 6554321111111123456789999999999999999999998776655433333 56778899999999999998
Q ss_pred HHHHHHHHcCcEEEEec-CChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccC
Q 008787 282 VIEEYFFRRGASVGYYH-GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGY 360 (553)
Q Consensus 282 ~~~~~~l~~g~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (553)
...+...+.|++.++.. .++..+++.++++++|++.++|.++..|++.......
T Consensus 239 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~------------------------- 293 (545)
T PRK08162 239 CFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRA------------------------- 293 (545)
T ss_pred HHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccccc-------------------------
Confidence 76544444455544444 4999999999999999999999999988652110000
Q ss_pred CcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC---------
Q 008787 361 KQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE--------- 431 (553)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~--------- 431 (553)
...+.+.++++|+.+++++.+.+++. +.++++.||+||+++.+..+....
T Consensus 294 --------------------~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 352 (545)
T PRK08162 294 --------------------GIDHPVHAMVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDE 352 (545)
T ss_pred --------------------CCccceEEEECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccc
Confidence 00145667889999999999998875 999999999999876555432211
Q ss_pred -ccccCccCCCCCC-eeEEEeecCCCCCCCCC-CC-CCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCC
Q 008787 432 -MCMVGTAGPVSVY-SELRLEEVPEMGYSPLD-DP-PCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNG 507 (553)
Q Consensus 432 -~~~~~~~G~~~~~-~~v~i~~~~~~~~~~~~-~~-~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG 507 (553)
.....+.|.+.+. ..++++| ++++ .+++ .| +.|||+++|+.++.||+++++.+...|.+|||+|||+|++|+||
T Consensus 353 ~~~~~~~~g~~~~~~~~~~i~d-~~~~-~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg 430 (545)
T PRK08162 353 RAQLKARQGVRYPLQEGVTVLD-PDTM-QPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDG 430 (545)
T ss_pred hhhccCCCCcccCCcceEEEEc-CCCC-cccCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEcCCc
Confidence 0112345655543 3567777 4333 2332 23 47999999999999999999999999999999999999999999
Q ss_pred cEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 508 VVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 508 ~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+++++||.+|+|++ +|++++|.+||+.|.+||+|.+|+|+|.++
T Consensus 431 ~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~ 474 (545)
T PRK08162 431 YIKIKDRSKDIIIS-GGENISSIEVEDVLYRHPAVLVAAVVAKPD 474 (545)
T ss_pred cEEEEecccceEEe-CCEEECHHHHHHHHHhCCcccEEEEEeeec
Confidence 99999999999996 899999999999999999999999999764
No 91
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-53 Score=448.64 Aligned_cols=427 Identities=18% Similarity=0.200 Sum_probs=330.4
Q ss_pred HHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEe
Q 008787 50 MSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICV 129 (553)
Q Consensus 50 ~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 129 (553)
.+++++|+++|+.+. +. + +.+||+||.++++++|..|.++|+++||+|+++++|++++++++|||+++|++++
T Consensus 5 ~~a~~~p~~~a~~~~---~~--~--~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~ 77 (501)
T PRK13390 5 THAQIAPDRPAVIVA---ET--G--EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYIT 77 (501)
T ss_pred hhhhhCCCCcEEEec---CC--C--eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 467889999999864 21 1 5899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccc
Q 008787 130 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKV 209 (553)
Q Consensus 130 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 209 (553)
|+++..+++++.++++++++++++++.......... . ......+.+..... ....+++......
T Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~- 141 (501)
T PRK13390 78 AINHHLTAPEADYIVGDSGARVLVASAALDGLAAKV-G---ADLPLRLSFGGEID-----------GFGSFEAALAGAG- 141 (501)
T ss_pred ccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHh-h---hccceEEEecCccc-----------ccccHHHHhcccC-
Confidence 999999999999999999999999977543322111 0 01111122211100 1122333322110
Q ss_pred cccccCCCCCCCeEEEEecCCCCCCCceEEe--ccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHH
Q 008787 210 NEMEILPPQPFNICTIMYTSGTSGDPKGVVL--THETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYF 287 (553)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~--th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 287 (553)
+ .....++.++|+|||||||.||+|++ +|.++.......... ......+..++++++.+|++|.+++......
T Consensus 142 ---~-~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~ 216 (501)
T PRK13390 142 ---P-RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAI-ARAFYDISESDIYYSSAPIYHAAPLRWCSMV 216 (501)
T ss_pred ---C-CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhh-HHHHhCCCCCCeEEecccchhhhHHHHHHHH
Confidence 0 01122357999999999999999995 455544321111000 0001256788999999999999988665556
Q ss_pred HHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcc
Q 008787 288 FRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 366 (553)
Q Consensus 288 l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (553)
+..|+++++.+. ++..+++.|+++++|++.++|+++..+.+......
T Consensus 217 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------------------- 264 (501)
T PRK13390 217 HALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVR-------------------------------- 264 (501)
T ss_pred HhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhc--------------------------------
Confidence 678999888776 89999999999999999999999988864211000
Q ss_pred hHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCee
Q 008787 367 PLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSE 446 (553)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~ 446 (553)
...++ +++|.+++||+++++++.+.+++.++.++++.||+||+++++...........+++|+|+++ +
T Consensus 265 ---~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~ 332 (501)
T PRK13390 265 ---TRYDV--------SSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-D 332 (501)
T ss_pred ---ccCCh--------hhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-e
Confidence 00011 37899999999999999999999889999999999999876554433222334789999999 7
Q ss_pred EEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc---CCccccCceEEEccCCcEEEEecccCceecCC
Q 008787 447 LRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII---DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQ 523 (553)
Q Consensus 447 v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~---~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~ 523 (553)
+++++ +++ .++++|+.|||+++|++++.||+++++.+.+.+. ++|++|||+|++|+||++++.||.+|+|++ +
T Consensus 333 ~~i~d-~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~-~ 408 (501)
T PRK13390 333 LHICD-DDG--NELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIIS-G 408 (501)
T ss_pred EEEEC-CCC--CCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeE-C
Confidence 99988 554 3456789999999999999999999999988762 679999999999999999999999999996 8
Q ss_pred ceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 524 GEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 524 G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|++|+|.+||++|.+||.|.+|+|+|.++
T Consensus 409 G~~v~p~eIE~~l~~~~~v~~~~v~~~~~ 437 (501)
T PRK13390 409 GVNIYPQETENALTMHPAVHDVAVIGVPD 437 (501)
T ss_pred CeeeCHHHHHHHHHhCCCeeEEEEEeccC
Confidence 99999999999999999999999999865
No 92
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.2e-54 Score=537.19 Aligned_cols=419 Identities=19% Similarity=0.256 Sum_probs=354.1
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|..+++++|+++|+++. + +++||+||.++++++|+.|+++|+++|++|+++++|++++++++||
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~la 3164 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFG---D------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLA 3164 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeC---C------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHH
Confidence 468999999999999999999875 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++.++.+++.++++.+++++++++......+... ....++.++...
T Consensus 3165 vl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~------~~~~~~~~~~~~----------------- 3221 (3956)
T PRK12467 3165 VLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP------AGDTALTLDRLD----------------- 3221 (3956)
T ss_pred HHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc------cCCceeeecchh-----------------
Confidence 999999999999999999999999999999999988765443111 011122222110
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
........+.....++++++++|||||||.||||+++|+++.+.+......+ ++..+|+++.+.|++|..+
T Consensus 3222 ----~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 3292 (3956)
T PRK12467 3222 ----LNGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-----ELDANDRVLLFMSFSFDGA 3292 (3956)
T ss_pred ----hcccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc-----CCCcCCEEEEecCccHhHH
Confidence 0011112223345788999999999999999999999999999988877666 7889999999999999988
Q ss_pred HHHHHHHHHcCcEEEEecC---ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh
Q 008787 281 RVIEEYFFRRGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN 357 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (553)
....+.++..|+++++.+. ++..+++.|+++++|++.++|+++..|++...
T Consensus 3293 ~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~-------------------------- 3346 (3956)
T PRK12467 3293 QERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG-------------------------- 3346 (3956)
T ss_pred HHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--------------------------
Confidence 8778889999999999874 78999999999999999999999988764210
Q ss_pred ccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCCc----
Q 008787 358 MGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDEM---- 432 (553)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~~---- 432 (553)
....++||.+++||+++++++.+.|.+.+ +..+++.||+||++..++.......
T Consensus 3347 ---------------------~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 3405 (3956)
T PRK12467 3347 ---------------------GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCE 3405 (3956)
T ss_pred ---------------------ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccC
Confidence 00114899999999999999999998877 6789999999999876664332211
Q ss_pred cccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCC-------ccccCceEEEc
Q 008787 433 CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDG-------WFHTGDIGQIL 504 (553)
Q Consensus 433 ~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g-------~~~TGD~g~~~ 504 (553)
....++|+|++|++++|+| +++ .+++.|+.|||+|+|+.+++||+++|+.|++.| .++ ||+|||+|+++
T Consensus 3406 ~~~~~iG~p~~~~~~~v~d-~~~--~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~ 3482 (3956)
T PRK12467 3406 APYAPIGRPVAGRSIYVLD-GQL--NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYR 3482 (3956)
T ss_pred CCCCCCccccCCCEEEEEC-CCC--CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheec
Confidence 1236799999999999998 554 456677999999999999999999999999998 443 69999999999
Q ss_pred cCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 505 PNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 505 ~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
+||+|+++||.||+||+ +|++|+|.|||++|.+||+|.+|+|++..
T Consensus 3483 ~dG~l~~~GR~d~~iki-~G~rIe~~EIE~~l~~~p~V~~a~v~~~~ 3528 (3956)
T PRK12467 3483 ADGVIEYLGRIDHQVKI-RGFRIELGEIEARLLQHPSVREAVVLARD 3528 (3956)
T ss_pred CCCcEEEeccccceEee-ceEeecHHHHHHHHhhCcccceEEEEEec
Confidence 99999999999999998 79999999999999999999999999864
No 93
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=6.9e-54 Score=499.62 Aligned_cols=420 Identities=21% Similarity=0.268 Sum_probs=349.5
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.++++++|+++|+++. + +++||+||.++++++|+.|.+.|+++|++|+++++++.+++++++|
T Consensus 457 ~~~l~~~~~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la 527 (1296)
T PRK10252 457 ETTLSALVAQQAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHA 527 (1296)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 368999999999999999999864 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++.++++.+++++++++......+... ... .++...
T Consensus 528 ~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~-~~~~~~-------------------- 581 (1296)
T PRK10252 528 IVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----PDL-TSLCYN-------------------- 581 (1296)
T ss_pred HHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----CCc-eeeecc--------------------
Confidence 999999999999999999999999999999999988765443111 011 111111
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
...... ...+.....++++++++|||||||.||||+++|+++.+.+......+ ++..+|++++..|++|..+
T Consensus 582 -~~~~~~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 653 (1296)
T PRK10252 582 -APLAPQ--GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-----PLTADDVVLQKTPCSFDVS 653 (1296)
T ss_pred -cccccc--cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEEEeCCcchhhh
Confidence 100000 01111223578999999999999999999999999999888877666 7889999999999999888
Q ss_pred HHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 281 RVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+...+.++..|+++++.+. ++..+++.++++++|++.++|+++..+++.......
T Consensus 654 ~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~--------------------- 712 (1296)
T PRK10252 654 VWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGA--------------------- 712 (1296)
T ss_pred HHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccc---------------------
Confidence 8778889999999998763 899999999999999999999999887653211100
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-----
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE----- 431 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~----- 431 (553)
....+++|.+++||+++++++.+.|.+.++.++++.||+||++..++......
T Consensus 713 ----------------------~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 770 (1296)
T PRK10252 713 ----------------------RQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAA 770 (1296)
T ss_pred ----------------------cccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccc
Confidence 00013799999999999999999999888999999999999987665443221
Q ss_pred -ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cC------CccccCceEEE
Q 008787 432 -MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-ID------GWFHTGDIGQI 503 (553)
Q Consensus 432 -~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~------g~~~TGD~g~~ 503 (553)
.....++|+|+++++++|+| +.+ .+++.|+.|||+|+|+.++.||+++|+.+.+.| .+ +||+|||+|++
T Consensus 771 ~~~~~~~iG~p~~~~~~~i~d-~~~--~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~ 847 (1296)
T PRK10252 771 VRGSSVPIGYPVWNTGLRILD-ARM--RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARW 847 (1296)
T ss_pred cCCCCCCcccccCCCEEEEEC-CCC--CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEE
Confidence 12235799999999999998 544 455677999999999999999999999999888 32 39999999999
Q ss_pred ccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEec
Q 008787 504 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYS 550 (553)
Q Consensus 504 ~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~ 550 (553)
++||+++++||.|++|++ +|++|+|.|||++|.+||+|.+|+|++.
T Consensus 848 ~~~G~l~~~GR~d~~ik~-~G~ri~~~eIE~~l~~~~~v~~a~v~~~ 893 (1296)
T PRK10252 848 LDDGAVEYLGRSDDQLKI-RGQRIELGEIDRAMQALPDVEQAVTHAC 893 (1296)
T ss_pred cCCCcEEEecccCCeEEE-eeEEecHHHHHHHHHhCccccceEEEEE
Confidence 999999999999999998 7999999999999999999999987754
No 94
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-53 Score=443.21 Aligned_cols=395 Identities=26% Similarity=0.302 Sum_probs=325.4
Q ss_pred HcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCC
Q 008787 53 QKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLY 132 (553)
Q Consensus 53 ~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 132 (553)
...++++|+++. + +++||.||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++
T Consensus 11 ~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 76 (471)
T PRK07787 11 AAADIADAVRIG----G-----RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVP 76 (471)
T ss_pred cccCCceEEEeC----C-----cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 456888998763 3 58999999999999999996 579999999999999999999999999999999
Q ss_pred CCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhccccccc
Q 008787 133 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEM 212 (553)
Q Consensus 133 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 212 (553)
+..+.+++.++++.+++++++++..... ....... +... ...+ .
T Consensus 77 ~~~~~~~l~~~l~~~~~~~il~~~~~~~----------~~~~~~~-~~~~--------------~~~~-----------~ 120 (471)
T PRK07787 77 PDSGVAERRHILADSGAQAWLGPAPDDP----------AGLPHVP-VRLH--------------ARSW-----------H 120 (471)
T ss_pred CCCChHHHHHHHHhcCCCEEEecCCccc----------cccccee-eecc--------------cccc-----------c
Confidence 9999999999999999999999763110 0011000 0000 0000 0
Q ss_pred ccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcC
Q 008787 213 EILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRG 291 (553)
Q Consensus 213 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g 291 (553)
......++++++++|||||||.||+|.+||+++...+..+...+ ++..++++++.+|++|.+|+.. .+.++..|
T Consensus 121 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 195 (471)
T PRK07787 121 RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-----QWTADDVLVHGLPLFHVHGLVLGVLGPLRIG 195 (471)
T ss_pred cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-----CCCccceeEeccCCeeechhHHHHHHHHhcC
Confidence 11124568999999999999999999999999998877766555 6778899999999999999886 56679999
Q ss_pred cEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHH
Q 008787 292 ASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLAD 370 (553)
Q Consensus 292 ~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (553)
+++++.+. ++..+++.++ +++|++.++|.++..|.+.....
T Consensus 196 ~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~------------------------------------- 237 (471)
T PRK07787 196 NRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAA------------------------------------- 237 (471)
T ss_pred CEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcccc-------------------------------------
Confidence 99988776 8999999999 99999999999998886411000
Q ss_pred HHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEe
Q 008787 371 LLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLE 450 (553)
Q Consensus 371 ~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~ 450 (553)
..++++|.+++||+++++++.+++.+.++.++++.||+||++...+.... ....++++|+|+++++++|+
T Consensus 238 ---------~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~g~~~~i~ 307 (471)
T PRK07787 238 ---------RALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRAD-GERRPGWVGLPLAGVETRLV 307 (471)
T ss_pred ---------ccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCC-CcccCCcccccCCCcEEEEE
Confidence 00137999999999999999999999899999999999999865444332 23334789999999999999
Q ss_pred ecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecc-cCceecCCceeec
Q 008787 451 EVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRK-KNLIKISQGEYVA 528 (553)
Q Consensus 451 ~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~-~d~i~~~~G~~~~ 528 (553)
+ +++...+.+.++.|||+++|++++.||+++++.+.+.| .+|||+|||+|++++||+++++||. +++++. +|++++
T Consensus 308 d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~-~G~~v~ 385 (471)
T PRK07787 308 D-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKS-GGYRIG 385 (471)
T ss_pred C-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEee-CCEEEC
Confidence 9 65554432223489999999999999999999999888 5899999999999999999999996 789996 899999
Q ss_pred chhHHHHHhcCcCcceEEEEecCC
Q 008787 529 LEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 529 ~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|.+||++|..+|.|.+++|+|.++
T Consensus 386 ~~eIE~~l~~~~~v~~~~v~~~~~ 409 (471)
T PRK07787 386 AGEIETALLGHPGVREAAVVGVPD 409 (471)
T ss_pred HHHHHHHHHhCCCcceEEEEcccc
Confidence 999999999999999999999864
No 95
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=2.3e-53 Score=447.81 Aligned_cols=416 Identities=17% Similarity=0.216 Sum_probs=340.6
Q ss_pred cHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHH
Q 008787 43 TAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACN 122 (553)
Q Consensus 43 ~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~ 122 (553)
++.+.|.+.++.+|+++|+... + +++||.||.+++.++|..|.+.|+++|++|+++++|+.++++++|||+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~ 71 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ----G-----QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSI 71 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC----C-----cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 5789999999999999999754 2 489999999999999999999999999999999999999999999999
Q ss_pred hcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHH
Q 008787 123 ALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDE 202 (553)
Q Consensus 123 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (553)
++|++++|+++.++.+++.++++..+++.++++......... .. ++.++. ...
T Consensus 72 ~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--------~~-~~~~~~------------------~~~ 124 (502)
T TIGR01734 72 KSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--------TQ-IITLSA------------------LEQ 124 (502)
T ss_pred HhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--------Cc-eEEchH------------------hhh
Confidence 999999999999999999999999999999998765332211 11 111111 111
Q ss_pred HHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHH
Q 008787 203 FLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRV 282 (553)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 282 (553)
+..... .........++++++++|||||||.||+|.++|.++..........+ ....++++++..|++|..++.
T Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~ 198 (502)
T TIGR01734 125 AETSGG-PVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-----PLSEGKQFLNQAPFSFDLSVM 198 (502)
T ss_pred hhhhcC-CccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-----CCCCCceEEeecCceechhHH
Confidence 111110 11111234678899999999999999999999999998877665544 677889999999999999888
Q ss_pred HHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhc
Q 008787 283 IEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNM 358 (553)
Q Consensus 283 ~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
.++.++..|+++++.+. ++..+++.+++++++.+.++|.++..++.....
T Consensus 199 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~-------------------------- 252 (502)
T TIGR01734 199 DLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNF-------------------------- 252 (502)
T ss_pred HHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccc--------------------------
Confidence 78889999999988764 789999999999999999999998776431100
Q ss_pred cCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccC-C---Ccc
Q 008787 359 GYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFP-D---EMC 433 (553)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~-~---~~~ 433 (553)
.. ...++++.++++|+++++++.+.+.+.+ ++++++.||+||++........ . ...
T Consensus 253 -----------~~--------~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 313 (502)
T TIGR01734 253 -----------NQ--------ENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQY 313 (502)
T ss_pred -----------cc--------ccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccC
Confidence 00 0114899999999999999999998887 7899999999998764443221 1 122
Q ss_pred ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc--C--CccccCceEEEccCCcE
Q 008787 434 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--D--GWFHTGDIGQILPNGVV 509 (553)
Q Consensus 434 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TGD~g~~~~dG~l 509 (553)
...++|.+.|+++++|++ +++ .++++|+.|||+++|++++.||+++++.+.+.|. + +||+|||+|++|++ ++
T Consensus 314 ~~~~vg~~~~~~~~~i~~-~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l 389 (502)
T TIGR01734 314 PRLPIGFAKPDMNLFIMD-EEG--EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QL 389 (502)
T ss_pred CccccccccCCCEEEEEC-CCC--CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EE
Confidence 235789999999999999 554 4455678999999999999999999999888762 3 59999999999966 99
Q ss_pred EEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEec
Q 008787 510 KIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYS 550 (553)
Q Consensus 510 ~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~ 550 (553)
+++||.+|+|++ +|++|+|.+||+.+.+||.|.+|+|++.
T Consensus 390 ~i~GR~~d~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~ 429 (502)
T TIGR01734 390 FYQGRLDFQIKL-HGYRIELEDIEFNLRQSSYIESAVVVPK 429 (502)
T ss_pred EEeccccCeEEE-CcEEeCHHHHHHHHHcCCCccEEEEEEE
Confidence 999999999997 8999999999999999999999999984
No 96
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.2e-52 Score=442.74 Aligned_cols=417 Identities=18% Similarity=0.204 Sum_probs=343.4
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
++++.++|.++++.+|+++++... + ..+||.||.+.+.++|..|.+.|+++|++|+++++|+.++++++||
T Consensus 1 ~~~~~~~l~~~a~~~p~~~~~~~~----~-----~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a 71 (503)
T PRK04813 1 IMDIIETIEEFAQTQPDFPAYDYL----G-----EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLG 71 (503)
T ss_pred CchHHHHHHHHHHhCCCceEEEeC----C-----cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 467899999999999999998753 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++.++++.+++++++++....... ... .. +.+
T Consensus 72 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~---------------------~~~ 121 (503)
T PRK04813 72 AVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------LGI-PV---------------------ITL 121 (503)
T ss_pred HHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------cCC-cE---------------------Eeh
Confidence 999999999999999999999999999999999987641100 001 11 111
Q ss_pred HHHHhcc--cccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH
Q 008787 201 DEFLHLG--KVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 201 ~~l~~~~--~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
+++.... ...........++++++++|||||||.||+|.+||+++..........+ .+..+++++...|++|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~ 196 (503)
T PRK04813 122 DELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-----ALPEGPQFLNQAPYSFD 196 (503)
T ss_pred HHhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-----CCCcCceeeecCCcchh
Confidence 1111110 0111112234678899999999999999999999999998877665554 67788999999999999
Q ss_pred HHHHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 279 LDRVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 279 ~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
.++..++.++..|+++++.+. ++..+++.+++++++++.++|+++..++......
T Consensus 197 ~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~--------------------- 255 (503)
T PRK04813 197 LSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFN--------------------- 255 (503)
T ss_pred HhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccC---------------------
Confidence 988777788999999988774 7899999999999999999999998764321100
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCC---
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD--- 430 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~--- 430 (553)
+...+++|.++++|+++++.+.+++.+.+ +..+++.||+||++...+.....
T Consensus 256 ------------------------~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~ 311 (503)
T PRK04813 256 ------------------------EEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEM 311 (503)
T ss_pred ------------------------cccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccc
Confidence 01114899999999999999999999988 78899999999997655432211
Q ss_pred -CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc--CC--ccccCceEEEcc
Q 008787 431 -EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--DG--WFHTGDIGQILP 505 (553)
Q Consensus 431 -~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~--~g--~~~TGD~g~~~~ 505 (553)
......++|++.++.++++++ +++. +++.++.|||+++|+.++.||+++++.+...|. +| ||+|||+|++ +
T Consensus 312 ~~~~~~~~~g~~~~~~~~~i~d-~~~~--~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~ 387 (503)
T PRK04813 312 LDQYKRLPIGYAKPDSPLLIID-EEGT--KLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-E 387 (503)
T ss_pred cccCCCCcccccCCCCEEEEEC-CCCC--CCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-e
Confidence 122335789999999999999 5554 445678999999999999999999999988872 44 9999999999 8
Q ss_pred CCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 506 NGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 506 dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
||++++.||.+|+|++ +|++++|.+||+.+.+||+|.+++|+|.+
T Consensus 388 ~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 432 (503)
T PRK04813 388 DGLLFYQGRIDFQIKL-NGYRIELEEIEQNLRQSSYVESAVVVPYN 432 (503)
T ss_pred CCeEEEeccccceEEE-CcEEeCHHHHHHHHHhCCCcceEEEEEee
Confidence 9999999999999997 89999999999999999999999999854
No 97
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-52 Score=440.46 Aligned_cols=429 Identities=20% Similarity=0.193 Sum_probs=338.8
Q ss_pred HHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEE
Q 008787 49 SMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLIC 128 (553)
Q Consensus 49 ~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 128 (553)
..+++++|+++|+++. ++. +.+||.||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~ 76 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA---STG----EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYY 76 (511)
T ss_pred hhhHhhCCCceEEEec---CCC----CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEE
Confidence 4677889999999864 221 579999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhccc
Q 008787 129 VPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGK 208 (553)
Q Consensus 129 v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 208 (553)
+++++..+.+++.++++.++++.++++........+... ........+....... ......+.+......
T Consensus 77 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 77 TCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLK-QCPGVRHRLVLDGDGE---------LEGFVGYAEAVAGLP 146 (511)
T ss_pred eccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHh-cCCCceEEEEecCCCC---------CcccccHHHHhcCCC
Confidence 999999999999999999999999999876654433222 1122333333332110 001223333332211
Q ss_pred ccccccCCCCCCCeEEEEecCCCCCCCceEEe--ccHhHHHHH---hhchhhhccccCCCCCCcEEEEecChHHHHHHHH
Q 008787 209 VNEMEILPPQPFNICTIMYTSGTSGDPKGVVL--THETIATFV---SGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI 283 (553)
Q Consensus 209 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~--th~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 283 (553)
. ......++.++++|||||||.||+|.+ +|.++.... ......+ .+..++++++..|++|.+++..
T Consensus 147 ~----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~ 217 (511)
T PRK13391 147 A----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-----GFRSDMVYLSPAPLYHSAPQRA 217 (511)
T ss_pred C----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-----CCCCCCeEEEcCCHHHHHHHHH
Confidence 1 111234567899999999999999995 465553322 2222222 5677899999999999999887
Q ss_pred HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCc
Q 008787 284 EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQ 362 (553)
Q Consensus 284 ~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (553)
.+.++..|+++++.+. +++.+++.++++++|++.++|.++..+++......
T Consensus 218 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---------------------------- 269 (511)
T PRK13391 218 VMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVR---------------------------- 269 (511)
T ss_pred HHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhc----------------------------
Confidence 7788999999988876 99999999999999999999999988764211100
Q ss_pred CCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCC
Q 008787 363 REASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS 442 (553)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~ 442 (553)
+.. ..+++|.+++||+++++++.+++++.+|..+++.||+||++.++...........+++|++.
T Consensus 270 -------~~~--------~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~ 334 (511)
T PRK13391 270 -------DKY--------DLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAM 334 (511)
T ss_pred -------ccC--------CccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcc
Confidence 000 11389999999999999999999998999999999999998876554433333447899999
Q ss_pred CCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-c-CCccccCceEEEccCCcEEEEecccCcee
Q 008787 443 VYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I-DGWFHTGDIGQILPNGVVKIIDRKKNLIK 520 (553)
Q Consensus 443 ~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~-~g~~~TGD~g~~~~dG~l~~~GR~~d~i~ 520 (553)
++ .+++++ +++ .+++.|+.|||+++|+ ++.||+++++.+.+.+ . ++||+|||+|++++||.+++.||.+|+|+
T Consensus 335 ~g-~~~i~d-~~~--~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~ 409 (511)
T PRK13391 335 FG-DLHILD-DDG--AELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMII 409 (511)
T ss_pred cc-eEEEEC-CCC--CCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEE
Confidence 99 688888 544 4445678999999999 8889999999998887 3 48999999999999999999999999999
Q ss_pred cCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 521 ISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 521 ~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+ +|++++|.+||++|.+||.|.+|+|+|.++
T Consensus 410 ~-~G~~v~~~eie~~l~~~~~v~~~~v~~~~~ 440 (511)
T PRK13391 410 S-GGVNIYPQEAENLLITHPKVADAAVFGVPN 440 (511)
T ss_pred e-CCEEECHHHHHHHHHhCCCcceEEEEecCC
Confidence 6 899999999999999999999999998864
No 98
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-53 Score=452.33 Aligned_cols=438 Identities=21% Similarity=0.270 Sum_probs=338.8
Q ss_pred CCCCCCCCCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc
Q 008787 32 NGFPSVDSDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC 111 (553)
Q Consensus 32 ~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~ 111 (553)
..+|..-.++.++.++|...++++|+..++ . ...+.++.+||.||..++.++|.+|.++|+++||+|+++++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~ 84 (579)
T PRK09192 11 SSLPRRYADFPTLVEALDYAALGEAGMNFY-D-----RRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETD 84 (579)
T ss_pred ccccccccchhhHHHHHHHhhccCCceEEE-e-----cCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCc
Confidence 345666667899999999999988865543 2 2223347899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhcCCEEeeCCCCCC-------hhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCch
Q 008787 112 PQWVEAMEACNALSLICVPLYDTLG-------PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTA 184 (553)
Q Consensus 112 ~~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (553)
++++++++||+++|++++|+++... .+++.++++.+++++++++......+.+.... .....
T Consensus 85 ~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~----~~~~~------- 153 (579)
T PRK09192 85 GDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHG----NPLLH------- 153 (579)
T ss_pred hhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcc----ccccc-------
Confidence 9999999999999999999976432 57899999999999999998766544332110 00000
Q ss_pred HHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchh-hhccccCCC
Q 008787 185 EQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDL-FLDQFEDKM 263 (553)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~-~~~~~~~~~ 263 (553)
..++.++.... ..........++++++++|||||||.||+|.++|+++...+..... .+ ++
T Consensus 154 ------------~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-----~~ 215 (579)
T PRK09192 154 ------------VLSHAWFKALP-EADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-----KV 215 (579)
T ss_pred ------------eeehhhhcccC-CCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-----cC
Confidence 11222222211 1112223356789999999999999999999999999988776554 34 67
Q ss_pred CCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhh
Q 008787 264 TVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEEL 337 (553)
Q Consensus 264 ~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 337 (553)
..+|+++.++|++|.+|+.. ++.++..|+++++.+. ++..+++.+.++++++++.+|..+..+.......
T Consensus 216 ~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~---- 291 (579)
T PRK09192 216 RPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK---- 291 (579)
T ss_pred CCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc----
Confidence 88999999999999999875 4556888988877652 6889999999999987776555444432211000
Q ss_pred chHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC------Cce
Q 008787 338 RPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC------AFL 411 (553)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~------~~i 411 (553)
.....++ +++|.+++||+++++++.+.+.+.++ ..+
T Consensus 292 ------------------------------~~~~~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~ 333 (579)
T PRK09192 292 ------------------------------DLAELDL--------SCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAF 333 (579)
T ss_pred ------------------------------cccccch--------hhhheeEecCccCCHHHHHHHHHHHHhcCCChhhc
Confidence 0011122 38999999999999999999888763 248
Q ss_pred EeeeccccCCCceeeccCCCc---------------------------cccCccCCCCCCeeEEEeecCCCCCCCCCCCC
Q 008787 412 VQGYGLTETCGPTTVCFPDEM---------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPP 464 (553)
Q Consensus 412 ~~~YG~tE~g~~~~~~~~~~~---------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~ 464 (553)
++.||+||+++..+....... ....++|.++|++++++++ +++. .++.++
T Consensus 334 ~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~--~~~~g~ 410 (579)
T PRK09192 334 MPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGM--PLPERV 410 (579)
T ss_pred ccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCC--CCCCCC
Confidence 999999999876554322110 0124789999999999999 5543 445678
Q ss_pred CCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcc
Q 008787 465 CGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIE 543 (553)
Q Consensus 465 ~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~ 543 (553)
.|||+++|+.++.||+++ +.+.+.+ .+|||+|||+|++ ++|+++++||.+|+|++ +|++|+|.+||++|.+||+|.
T Consensus 411 ~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~ 487 (579)
T PRK09192 411 VGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIII-NGRNIWPQDIEWIAEQEPELR 487 (579)
T ss_pred EEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEE-CCCccCHHHHHHHHHhcCCcc
Confidence 999999999999999999 5566555 7899999999999 89999999999999997 899999999999999999998
Q ss_pred --eEEEEecCC
Q 008787 544 --DVSISYSSV 552 (553)
Q Consensus 544 --~~~V~g~~~ 552 (553)
+|+|+|.++
T Consensus 488 ~~~~~v~~~~~ 498 (579)
T PRK09192 488 SGDAAAFSIAQ 498 (579)
T ss_pred CCcEEEEEecc
Confidence 899999765
No 99
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.2e-53 Score=439.38 Aligned_cols=387 Identities=25% Similarity=0.297 Sum_probs=322.6
Q ss_pred ccHHHHH-HHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 42 NTAWDIF-SMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 42 ~~l~~~l-~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
+++.+.+ +++++++|+++|+.+. + +.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la 72 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLN----D-----EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLA 72 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHH
Confidence 3444444 5668999999999753 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|+++..+.+++..+++.+++++++++.+... .. ..... .+
T Consensus 73 ~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--------~~~~~----------------------~~ 121 (458)
T PRK09029 73 LLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FS--------ALTSL----------------------HL 121 (458)
T ss_pred HHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hh--------hcccc----------------------cc
Confidence 9999999999999999999999999999999998766422 10 00000 00
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.. ..........++++++++|||||||.||+|.+||++++..+......+ ++..+++++..+|++|.+|
T Consensus 122 ~~------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~g 190 (458)
T PRK09029 122 QL------VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-----PFTAQDSWLLSLPLFHVSG 190 (458)
T ss_pred cc------ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-----CCCccceEEEecCcHhhhh
Confidence 00 001112234678899999999999999999999999999888766655 6778899999999999999
Q ss_pred HHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccC
Q 008787 281 RVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGY 360 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (553)
+...+.++..|+++++.+. ..+++.+ .++|.+..+|+++..+......
T Consensus 191 ~~~~~~~l~~G~~v~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~---------------------------- 238 (458)
T PRK09029 191 QGIVWRWLYAGATLVVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRSE---------------------------- 238 (458)
T ss_pred hHHHHHHHhCCceEEeCCh--HHHHHHH--hhceeeecChHHHHHHHhcccc----------------------------
Confidence 8777778999999988764 4566666 4789999999999887542110
Q ss_pred CcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCC
Q 008787 361 KQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGP 440 (553)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~ 440 (553)
..++|.+++||+++++.+.+++... |.++++.||+||++...+....+. ..++|+
T Consensus 239 ---------------------~~~l~~i~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~---~~~~G~ 293 (458)
T PRK09029 239 ---------------------PLSLKAVLLGGAAIPVELTEQAEQQ-GIRCWCGYGLTEMASTVCAKRADG---LAGVGS 293 (458)
T ss_pred ---------------------CCcceEEEECCCCCCHHHHHHHHHc-CCcEeccccccccCcceeccCCCC---CCCCCC
Confidence 0279999999999999999998875 999999999999987655433221 256999
Q ss_pred CCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCcee
Q 008787 441 VSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIK 520 (553)
Q Consensus 441 ~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~ 520 (553)
|++++++++++ |||+++|+.++.||+++++.+.....+|||+|||+|++| ||++++.||.+|+|+
T Consensus 294 ~~~~~~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~ 358 (458)
T PRK09029 294 PLPGREVKLVD--------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFF 358 (458)
T ss_pred CCCCCEEEEeC--------------CEEEEecCceeeeeecCccccccccCCCccCCCCcEEEe-CCEEEEeccccccee
Confidence 99999999876 899999999999999998887665578999999999999 999999999999999
Q ss_pred cCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 521 ISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 521 ~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+ +|++++|.+||++|.+||+|.+|+|+|.++
T Consensus 359 ~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~ 389 (458)
T PRK09029 359 S-GGEGIQPEEIERVINQHPLVQQVFVVPVAD 389 (458)
T ss_pred e-CCEEeCHHHHHHHHhcCCCcceEEEEccCC
Confidence 6 899999999999999999999999999875
No 100
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-53 Score=534.87 Aligned_cols=422 Identities=19% Similarity=0.245 Sum_probs=351.9
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|++.|+++|++|++++++++++++++||
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lA 2072 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFG---D------QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLA 2072 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcC---C------CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 458999999999999999999865 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|++|.++.+++.++++++++++++++......+... .... .+.++..
T Consensus 2073 il~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~~-~~~~~~~------------------ 2128 (5163)
T PRK12316 2073 VLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----AGVA-RLPLDRD------------------ 2128 (5163)
T ss_pred HHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----cccc-eEeccch------------------
Confidence 999999999999999999999999999999999988765433110 0111 1111110
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
..+... ....+.....++++++|+|||||||.||||+++|+++.+.+......+ ++..+++++.+.|++|..+
T Consensus 2129 ~~~~~~--~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 2201 (5163)
T PRK12316 2129 AEWADY--PDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-----ELSPADCELQFMSFSFDGA 2201 (5163)
T ss_pred hhhhcc--CccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-----CCCCcceEEEecCchHHHH
Confidence 000000 111122345789999999999999999999999999999988877666 7888999999999999988
Q ss_pred HHHHHHHHHcCcEEEEecC---ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHh
Q 008787 281 RVIEEYFFRRGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMN 357 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (553)
+..++.++..|+++++.+. ++..+++.++++++|++.++|+++..|.+.....
T Consensus 2202 ~~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------------------------ 2257 (5163)
T PRK12316 2202 HEQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD------------------------ 2257 (5163)
T ss_pred HHHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc------------------------
Confidence 8778889999999977654 7899999999999999999999999886532110
Q ss_pred ccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCC-cc--
Q 008787 358 MGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE-MC-- 433 (553)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~-~~-- 433 (553)
....+||.+++||+++++++.+.|.+.+ +..+++.||+||++..++...... ..
T Consensus 2258 ----------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 2315 (5163)
T PRK12316 2258 ----------------------GRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCG 2315 (5163)
T ss_pred ----------------------cCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccC
Confidence 0013799999999999999999998766 678999999999987665432221 11
Q ss_pred -ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-c-------CCccccCceEEEc
Q 008787 434 -MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I-------DGWFHTGDIGQIL 504 (553)
Q Consensus 434 -~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~-------~g~~~TGD~g~~~ 504 (553)
...++|+|+++++++|+| +++ .+++.|+.|||+|+|+.+++||+++|+.|++.| . ++||+|||+|+++
T Consensus 2316 ~~~~~iG~p~~~~~~~i~d-~~~--~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~ 2392 (5163)
T PRK12316 2316 AAYVPIGRALGNRRAYILD-ADL--NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYR 2392 (5163)
T ss_pred CCcCCcccccCCCEEEEEC-CCC--CCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEc
Confidence 125799999999999999 554 355677999999999999999999999999988 2 2499999999999
Q ss_pred cCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 505 PNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 505 ~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+||.|+++||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.++
T Consensus 2393 ~dG~l~~~GR~d~~iki-~G~rie~~eIE~~l~~~~~v~~a~v~~~~~ 2439 (5163)
T PRK12316 2393 ADGVVEYLGRIDHQVKI-RGFRIELGEIEARLQAHPAVREAVVVAQDG 2439 (5163)
T ss_pred CCCcEEEecCCCCeEEE-cCccCChHHHHHHHhhCcccceEEEEEEec
Confidence 99999999999999998 799999999999999999999999998653
No 101
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.1e-52 Score=482.78 Aligned_cols=433 Identities=19% Similarity=0.201 Sum_probs=340.6
Q ss_pred cccHHHHHHHHHHcCC-CCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYP-GNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p-~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
..++.+.|.++++++| ++.++.+. ++ +++||+||.++++++|+.|++ |+++||+|+++++|+++++++++
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~---~~-----~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~l 700 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDP---VN-----GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFF 700 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECC---CC-----CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHH
Confidence 4667888888888886 55666532 22 479999999999999999975 99999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhh-ccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL-SPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
||+++|++++|+++..+.+++.+++++++++++++++....... ............++.+++..... ....
T Consensus 701 a~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~ 772 (1140)
T PRK06814 701 ALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQI--------GLAD 772 (1140)
T ss_pred HHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccC--------ChHH
Confidence 99999999999999999999999999999999999876543221 00001111222344433211000 0000
Q ss_pred eHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH
Q 008787 199 SWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI 278 (553)
Q Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 278 (553)
.+........ ...+.+...++++++++|||||||.||+|.+||+++...+......+ ++..+|++++.+|++|.
T Consensus 773 ~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~ 846 (1140)
T PRK06814 773 KIKGLLAGRF-PLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-----DFSPEDKVFNALPVFHS 846 (1140)
T ss_pred HHHHHhhccC-CccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-----CCCCcCEEEEecchHHH
Confidence 1111111110 11111235678999999999999999999999999998887766655 67889999999999999
Q ss_pred HHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 008787 279 LDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 355 (553)
Q Consensus 279 ~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (553)
+++.. .+.++..|+++++.+. +...+.+.++++++|++.++|+++..+.+...
T Consensus 847 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~------------------------ 902 (1140)
T PRK06814 847 FGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH------------------------ 902 (1140)
T ss_pred HHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc------------------------
Confidence 99854 6668999999988764 66788899999999999999999987754210
Q ss_pred HhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCcccc
Q 008787 356 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMV 435 (553)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~ 435 (553)
.. ..+++|.+++||+++++++.+.+.+.++.++++.||+||++.....+.+.. ...
T Consensus 903 ---------------~~--------~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~ 958 (1140)
T PRK06814 903 ---------------PY--------DFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMH-NKA 958 (1140)
T ss_pred ---------------cc--------cccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCC-CCC
Confidence 00 013899999999999999999999989999999999999988766554332 334
Q ss_pred CccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhh-hhccCCccccCceEEEccCCcEEEEec
Q 008787 436 GTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTR-ESIIDGWFHTGDIGQILPNGVVKIIDR 514 (553)
Q Consensus 436 ~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGD~g~~~~dG~l~~~GR 514 (553)
+++|+|.|++++++.+ .++ .++.|||+++|++++.||+++++... +...+|||+|||+|++|+||++++.||
T Consensus 959 ~~vG~p~~g~~~~~~~-~~~------~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR 1031 (1140)
T PRK06814 959 GTVGRLLPGIEYRLEP-VPG------IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGR 1031 (1140)
T ss_pred CcCCccCCCCeEEEee-cCC------CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEec
Confidence 7899999999999987 321 24689999999999999998764332 123689999999999999999999999
Q ss_pred ccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 515 KKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 515 ~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.||+|++ +|++++|.|||+++.+||.|.+|+|+|.++
T Consensus 1032 ~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~ 1068 (1140)
T PRK06814 1032 AKRFAKI-AGEMISLAAVEELAAELWPDALHAAVSIPD 1068 (1140)
T ss_pred ccCeeee-CCEEECHHHHHHHHHhcCCcccEEEEEccc
Confidence 9999996 899999999999999999999999999875
No 102
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=8.1e-53 Score=523.23 Aligned_cols=422 Identities=20% Similarity=0.226 Sum_probs=352.2
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|.++|+++|++|++++++++++++++||
T Consensus 1573 ~~~~~~~~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~la 1643 (3956)
T PRK12467 1573 ARLVHQLIEDQAAATPEAVALVFG---E------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLA 1643 (3956)
T ss_pred cccHHHHHHHHHHhCCCCeEEEeC---C------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHH
Confidence 467999999999999999999864 3 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|++|.++.+++.++++++++++++++......+... ... .++.++...
T Consensus 1644 vlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-----~~~-~~~~~~~~~----------------- 1700 (3956)
T PRK12467 1644 ILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP-----DGL-RSLVLDQED----------------- 1700 (3956)
T ss_pred hhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc-----cCC-cEEEecccc-----------------
Confidence 999999999999999999999999999999999987655433110 111 222222211
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.+.... ....+.....++++++++|||||||.||||+++|+++.+.+......+ ++..+++++...|+.|..+
T Consensus 1701 -~~~~~~-~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 1773 (3956)
T PRK12467 1701 -DWLEGY-SDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-----QLSAADVVLQFTSFAFDVS 1773 (3956)
T ss_pred -chhccC-CCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-----CCCcccEEEEecCccHHHH
Confidence 000111 111222345678999999999999999999999999999888776665 7888999999999999999
Q ss_pred HHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 281 RVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+..++.++..|+++++.+. +++.+++.|+++++|++.++|+++..|.+.... .
T Consensus 1774 ~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~-~---------------------- 1830 (3956)
T PRK12467 1774 VWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ-V---------------------- 1830 (3956)
T ss_pred HHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc-c----------------------
Confidence 8878889999999999764 789999999999999999999999988652100 0
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCC----C
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPD----E 431 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~----~ 431 (553)
...+++|.+++||+++++++.+.|.+.+ +..+++.||+||++..++..... .
T Consensus 1831 -----------------------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~ 1887 (3956)
T PRK12467 1831 -----------------------EHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLE 1887 (3956)
T ss_pred -----------------------ccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccc
Confidence 0014899999999999999999888776 57799999999998766543321 1
Q ss_pred ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc--------CCccccCceEEE
Q 008787 432 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII--------DGWFHTGDIGQI 503 (553)
Q Consensus 432 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~g~~ 503 (553)
.....++|+|+++++++|.| +++ .+++.|+.|||+|+|+.+++||+++|+.|++.|. ++||+|||+|++
T Consensus 1888 ~~~~~~iG~p~~~~~~~vld-~~~--~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~ 1964 (3956)
T PRK12467 1888 GRDSVPIGQPIANLSTYILD-ASL--NPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARY 1964 (3956)
T ss_pred cCCCCCcccccCCCEEEEEC-CCC--CCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEE
Confidence 12236899999999999998 544 4566779999999999999999999999999882 249999999999
Q ss_pred ccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 504 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 504 ~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
++||.|+++||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+
T Consensus 1965 ~~dG~l~~~GR~D~qVki-~G~rIel~eIE~~l~~~p~V~~a~vv~~~ 2011 (3956)
T PRK12467 1965 RADGVIEYLGRIDHQVKI-RGFRIELGEIEARLREQGGVREAVVIAQD 2011 (3956)
T ss_pred CCCCCEEEecccCceEEe-CeEEechHHHHHHHHhCCCcceEEEEEec
Confidence 999999999999999998 79999999999999999999999999875
No 103
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=9.5e-53 Score=434.24 Aligned_cols=361 Identities=19% Similarity=0.213 Sum_probs=295.9
Q ss_pred EeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEE
Q 008787 76 WKTYKEVYEEVLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 154 (553)
Q Consensus 76 ~~Ty~el~~~v~~la~~L~~~gl-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~ 154 (553)
-+.|+||.+++.++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 37899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCC
Q 008787 155 QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGD 234 (553)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 234 (553)
+....... .... . . ......++++++++|||||||.
T Consensus 99 ~~~~~~~~----------------~~~~----------------~---------~---~~~~~~~~~~~~i~~TSGTTG~ 134 (452)
T PRK07445 99 LDQLKLSH----------------PPPL----------------P---------S---QGILPNLETGWIMIPTGGSSGQ 134 (452)
T ss_pred cCcccccc----------------CCCC----------------C---------c---cccCCCCCCcEEEEeCCCCCCC
Confidence 76532100 0000 0 0 0011346789999999999999
Q ss_pred CceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhhcC
Q 008787 235 PKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLMELKP 313 (553)
Q Consensus 235 pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~ 313 (553)
||+|++||+++...+......+ ++.. ++.++.+|++|.+|+...+.++..|+++++.+. ..........++++
T Consensus 135 PKgV~~t~~~l~~~~~~~~~~~-----~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~ 208 (452)
T PRK07445 135 IRFAIHTWETLTASVQGFQRYF-----QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSD 208 (452)
T ss_pred CcEEEechHHHHHHHHHHHHHh-----cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCc
Confidence 9999999999988777665544 3433 467889999999999877788999999988764 23333344457889
Q ss_pred cEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCC
Q 008787 314 TLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGA 393 (553)
Q Consensus 314 t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~ 393 (553)
+++.++|+++..+++.. .. .+ +++|.+++||+
T Consensus 209 t~~~~vP~~l~~l~~~~---~~-------------------------------------~l--------~~l~~i~~gG~ 240 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR---PQ-------------------------------------WL--------AQFRTILLGGA 240 (452)
T ss_pred eEEEehHHHHHHHHhhC---hh-------------------------------------hh--------hcceEEEECCc
Confidence 99999999999876410 00 01 38999999999
Q ss_pred CCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC-ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec
Q 008787 394 PLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG 472 (553)
Q Consensus 394 ~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~ 472 (553)
++++++.+.++.. +.++++.||+||++...+...+.. .....++|+|+|++++++++ ++.|||+|+|
T Consensus 241 ~l~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~-----------g~~Gel~v~g 308 (452)
T PRK07445 241 PAWPSLLEQARQL-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA-----------NQTGNITIQA 308 (452)
T ss_pred cCCHHHHHHHHhc-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC-----------CCcceEEEeC
Confidence 9999999988764 899999999999886554433322 22346899999999999872 3579999999
Q ss_pred CCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 473 KTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 473 ~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+.++.||++++.. .+|||+|||+|++|+||+|++.||.+|+|++ +|++|+|.+||++|.+||+|.+|+|+|.++
T Consensus 309 ~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~ 382 (452)
T PRK07445 309 QSLALGYYPQILD-----SQGIFETDDLGYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATGLVQDVCVLGLPD 382 (452)
T ss_pred CccchhhcCCccC-----CCCEEECCCEEEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCCCcceEEEEeccC
Confidence 9999999976421 4789999999999999999999999999996 899999999999999999999999999865
No 104
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-53 Score=427.26 Aligned_cols=448 Identities=20% Similarity=0.249 Sum_probs=358.4
Q ss_pred CCcccHHHHH-HHHHHc-CCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHH
Q 008787 39 SDLNTAWDIF-SMSVQK-YPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVE 116 (553)
Q Consensus 39 ~~~~~l~~~l-~~~a~~-~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~ 116 (553)
+.+.|+...+ .++... .++.+++++. +...+....+||.|+.+++.++|..|.+.|+++||+|++.+|+.++.++
T Consensus 60 g~~ln~~~n~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~i 136 (626)
T KOG1175|consen 60 GAFLNACYNCLDRHIKEKGGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVI 136 (626)
T ss_pred cchhhhhHhhhhhhhhhcCCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHH
Confidence 4455555444 444333 4899999887 4444444559999999999999999998899999999999999999999
Q ss_pred HHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccc------------cccccCccEEEEecCCch
Q 008787 117 AMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD------------CRSAQRLRVMVCFTSLTA 184 (553)
Q Consensus 117 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 184 (553)
+++||.++|++..++....++.++...++.++++++++.+.......... ..........+.+....
T Consensus 137 a~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~- 215 (626)
T KOG1175|consen 137 AMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN- 215 (626)
T ss_pred HHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc-
Confidence 99999999999999999999999999999999999998875332211110 00000111111111111
Q ss_pred HHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhh-chhhhccccCCC
Q 008787 185 EQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSG-VDLFLDQFEDKM 263 (553)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~-~~~~~~~~~~~~ 263 (553)
....|+.+..... ...+....+.+|+.+|+|||||||.||++.+|+......... ....+ ++
T Consensus 216 -----------~d~~~~~~~~~a~-~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~-----d~ 278 (626)
T KOG1175|consen 216 -----------RDLFWSLELKKAS-PEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF-----DL 278 (626)
T ss_pred -----------ccccHHHHhhhcC-CCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec-----cC
Confidence 1235555555443 333467789999999999999999999999998866544443 33333 78
Q ss_pred CCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC---ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhch
Q 008787 264 TVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRP 339 (553)
Q Consensus 264 ~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~---~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~ 339 (553)
.++|+++++..+.|+.|.++ ++.+++.|+++++.++ ++..+++.+.++++|.+++.|+.++.|.+...+...
T Consensus 279 q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~---- 354 (626)
T KOG1175|consen 279 QPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVT---- 354 (626)
T ss_pred CCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcccccc----
Confidence 89999999999999999987 5569999999999876 789999999999999999999999987543222211
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCC-ceEeeeccc
Q 008787 340 LRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLT 418 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~YG~t 418 (553)
..++ ++||.+.++|+++.++..+++.+.++. +|++.||+|
T Consensus 355 -------------------------------~~~~--------~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qt 395 (626)
T KOG1175|consen 355 -------------------------------SYSL--------KSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQT 395 (626)
T ss_pred -------------------------------cccc--------ceEEEEeecCccCCcchHHHHHHhcCccchhhceeee
Confidence 1111 279999999999999999999999987 699999999
Q ss_pred cCCCceeeccCCC-ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec--C-CccccccCChhhhhhhc---c
Q 008787 419 ETCGPTTVCFPDE-MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG--K-TLFSGYYKNPDLTRESI---I 491 (553)
Q Consensus 419 E~g~~~~~~~~~~-~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~--~-~~~~gy~~~~~~~~~~~---~ 491 (553)
|+|+.+....... ..++++.+.|.+|+.+.|.| +++...+..+ +.|+|+++. | ..+++|++|++....++ .
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~ 473 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKF 473 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccC
Confidence 9999999888777 67779999999999999999 6666555544 889999998 3 77899999999555554 3
Q ss_pred CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCCC
Q 008787 492 DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSVS 553 (553)
Q Consensus 492 ~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~~ 553 (553)
.|+|.|||.|++|+||++++.||.||+|++ +|.++.+.|||+++.+||.|.|++|||.++.
T Consensus 474 pg~y~tGD~~~rd~dGY~~i~GR~DDviNv-sGhRigtaEIE~al~~hp~VaEsAvVg~p~~ 534 (626)
T KOG1175|consen 474 PGYYFTGDGGRRDEDGYYWILGRVDDVINV-SGHRIGTAEIESALVEHPAVAESAVVGSPDP 534 (626)
T ss_pred CceEEecCceEEcCCceEEEEecccccccc-cceeecHHHHHHHHhhCcchhheeeecCCCC
Confidence 799999999999999999999999999997 7999999999999999999999999999873
No 105
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.3e-52 Score=529.33 Aligned_cols=421 Identities=19% Similarity=0.227 Sum_probs=352.7
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.++++++|+++|+++. + +++||+||.++++++|+.|.+.|+++|++|+++++|++++++++||
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la 580 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLA 580 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 467999999999999999999864 3 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
|+++|++++|++|.++.+++.++++.+++++++++......+.. .....++.++....
T Consensus 581 ~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~---------------- 638 (5163)
T PRK12316 581 ILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL------AAGVQVLDLDRPAA---------------- 638 (5163)
T ss_pred HHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc------ccCceEEEecCcch----------------
Confidence 99999999999999999999999999999999998765443211 11112233322110
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
..... ....+.....++++++++|||||||.||||+++|+++.+.+......+ ++..+++++...|++|..+
T Consensus 639 --~~~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~fd~~ 710 (5163)
T PRK12316 639 --WLEGY-SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-----GLGVGDTVLQKTPFSFDVS 710 (5163)
T ss_pred --hhccC-CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-----CCCCCCEEEeeCCeehHHH
Confidence 00000 111222345678999999999999999999999999999988877666 7888999999999999999
Q ss_pred HHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 281 RVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+...+.++..|+++++.+. ++..+++.++++++|++.++|++++.|++....
T Consensus 711 ~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~------------------------ 766 (5163)
T PRK12316 711 VWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDV------------------------ 766 (5163)
T ss_pred HHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcccc------------------------
Confidence 8888889999999999752 899999999999999999999999988641100
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeecc-CCCccc
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCF-PDEMCM 434 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~-~~~~~~ 434 (553)
...+++|.+++||+++++++.+.+.+.+ +.++++.||+||++..++... ......
T Consensus 767 -----------------------~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 823 (5163)
T PRK12316 767 -----------------------ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGD 823 (5163)
T ss_pred -----------------------ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCC
Confidence 0013899999999999999999987665 788999999999986544332 222233
Q ss_pred cCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc-------CCccccCceEEEccCC
Q 008787 435 VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-------DGWFHTGDIGQILPNG 507 (553)
Q Consensus 435 ~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-------~g~~~TGD~g~~~~dG 507 (553)
..++|+|++|++++|+| +++ .+++.|+.|||+|+|+.++.||+++|+.|++.|. ++||+|||+|++++||
T Consensus 824 ~~~iG~p~~~~~~~i~d-~~~--~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG 900 (5163)
T PRK12316 824 SVPIGRPIANLACYILD-ANL--EPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADG 900 (5163)
T ss_pred CCCCccccCCCEEEEEC-CCC--CCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCC
Confidence 46899999999999999 554 4566779999999999999999999999998872 2499999999999999
Q ss_pred cEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 508 VVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 508 ~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
.|+++||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+
T Consensus 901 ~l~~~GR~d~~ik~-~G~rI~~~EIE~~l~~~p~V~~a~V~~~~ 943 (5163)
T PRK12316 901 VIEYAGRIDHQVKL-RGLRIELGEIEARLLEHPWVREAAVLAVD 943 (5163)
T ss_pred CEEeecccCCEEEE-ceEEcChHHHHHHHHhCCCcceEEEEEcC
Confidence 99999999999998 79999999999999999999999999874
No 106
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-52 Score=447.30 Aligned_cols=435 Identities=18% Similarity=0.204 Sum_probs=325.3
Q ss_pred cHHHHHHHHHHcCCCCCceeeecccCC---CCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 43 TAWDIFSMSVQKYPGNRMLGWRPFVDG---KFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 43 ~l~~~l~~~a~~~p~~~al~~~~~~d~---~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
++.++|.+++..+|+++|+++. +. ..+..+.+||.||.+++.++|++|.+.| .+||+|+++++|++++++++|
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~l 77 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFI---DYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFL 77 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEE---ccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHH
Confidence 6789999999999999999875 31 1223468999999999999999999999 689999999999999999999
Q ss_pred HHHhcCCEEeeCCC---CCChhHHHHHHhhcCceEEEEcchhhhhhhcccccc-ccCccEEEEecCCchHHHHHHhhCCc
Q 008787 120 ACNALSLICVPLYD---TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRS-AQRLRVMVCFTSLTAEQKEMAVQTGI 195 (553)
Q Consensus 120 A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (553)
||+++|++++|+++ ..+.+++.+++++++++++++++.....+.+..... ......++.++..
T Consensus 78 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 144 (578)
T PRK05850 78 GALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL------------- 144 (578)
T ss_pred HHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc-------------
Confidence 99999999999987 456789999999999999999987665543221100 0011112211110
Q ss_pred eeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhh-ccccCCCCCCcEEEEecC
Q 008787 196 KPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFL-DQFEDKMTVDDVYLSFLP 274 (553)
Q Consensus 196 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p 274 (553)
. +.. ...........+++++++|||||||.||+|.+||++++..+....... .........++++++++|
T Consensus 145 ---~---~~~---~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p 215 (578)
T PRK05850 145 ---D---LDS---PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLP 215 (578)
T ss_pred ---c---ccc---CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECC
Confidence 0 000 000112234668999999999999999999999999988766543321 100001345789999999
Q ss_pred hHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHH-HHHHHHHhhchHHHHHHHH
Q 008787 275 LAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHE-GIKKALEELRPLRRRIFDA 347 (553)
Q Consensus 275 ~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 347 (553)
++|.+|+.. .+.+++.|+++++.+. ++..+++.+.+++++.. .+|..+..++. .....
T Consensus 216 l~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~-------------- 280 (578)
T PRK05850 216 FYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDD-------------- 280 (578)
T ss_pred CCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchh--------------
Confidence 999999875 6678999999988763 68999999999999855 56655443321 11000
Q ss_pred HHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC------CceEeeeccccCC
Q 008787 348 LYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC------AFLVQGYGLTETC 421 (553)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~------~~i~~~YG~tE~g 421 (553)
.....++ +++|.+++||+++++++.++|.+.|+ ..+++.||+||++
T Consensus 281 --------------------~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 332 (578)
T PRK05850 281 --------------------DMAGLDL--------GGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEAT 332 (578)
T ss_pred --------------------hhcCcch--------hhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhh
Confidence 0000111 37999999999999999999988763 3689999999987
Q ss_pred CceeeccCCCc------------------------cccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccc
Q 008787 422 GPTTVCFPDEM------------------------CMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFS 477 (553)
Q Consensus 422 ~~~~~~~~~~~------------------------~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~ 477 (553)
..+........ ....+.|.|. +.++++++ ++++ .+++.|+.|||+|+|++++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd-~~~~-~~~~~g~~Gel~v~g~~~~~ 409 (578)
T PRK05850 333 VYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVD-PDTC-IECPAGTVGEIWVHGDNVAA 409 (578)
T ss_pred hheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEc-CCCC-cCCCCCCEEEEEEecCcccc
Confidence 65443221100 0011334443 57899988 4433 45667899999999999999
Q ss_pred cccCChhhhhhhcc------------CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceE
Q 008787 478 GYYKNPDLTRESII------------DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDV 545 (553)
Q Consensus 478 gy~~~~~~~~~~~~------------~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~ 545 (553)
||+++++.+++.|. +|||+|||+|+++ ||+|+++||.+|+|++ +|++|+|.|||++|.+||.+ +|
T Consensus 410 gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~~-~~ 486 (578)
T PRK05850 410 GYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV-DGRNHYPDDIEATIQEITGG-RV 486 (578)
T ss_pred cccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE-CCeecCHHHHHHHHHHhcCC-cE
Confidence 99999999998883 4799999999998 9999999999999997 89999999999999999995 48
Q ss_pred EEEecCC
Q 008787 546 SISYSSV 552 (553)
Q Consensus 546 ~V~g~~~ 552 (553)
+|+++++
T Consensus 487 ~v~~v~~ 493 (578)
T PRK05850 487 AAISVPD 493 (578)
T ss_pred EEEEecC
Confidence 8888764
No 107
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.5e-52 Score=427.19 Aligned_cols=389 Identities=25% Similarity=0.323 Sum_probs=323.8
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 78 TYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 78 Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
||.||.+.+.++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCc
Q 008787 157 KKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPK 236 (553)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK 236 (553)
.....+..... ..+..... +...................+++++++|||||||.||
T Consensus 81 ~~~~~~~~~~~-------~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK 136 (408)
T TIGR01733 81 ALASRLAGLVL-------PIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPK 136 (408)
T ss_pred chhhhccccCC-------ceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCC
Confidence 76654422211 11111111 0000000000011111145788999999999999999
Q ss_pred eEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhc
Q 008787 237 GVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG----DLNALRDDLMELK 312 (553)
Q Consensus 237 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~ 312 (553)
+|.+||+++...+..+...+ .+..++++++..|++|.+++..++.++..|+++++.+. .+..+.+.+++++
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLARRY-----GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred EEEeccHHHHHHHHHHHHhc-----CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 99999999999888877655 67788999999999999998888889999999998876 2688999999999
Q ss_pred CcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcC
Q 008787 313 PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGG 392 (553)
Q Consensus 313 ~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG 392 (553)
+|.+.++|.+++.|.+... ...+++|.+++||
T Consensus 212 ~t~l~~~p~~~~~l~~~~~------------------------------------------------~~~~~l~~v~~~g 243 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP------------------------------------------------PALASLRLVILGG 243 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh------------------------------------------------hcccCceEEEEeC
Confidence 9999999999999875322 0114899999999
Q ss_pred CCCCHHHHHHHHHhcC-CceEeeeccccCCCceeeccCCC--cc--ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCe
Q 008787 393 APLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDE--MC--MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGE 467 (553)
Q Consensus 393 ~~l~~~~~~~~~~~~~-~~i~~~YG~tE~g~~~~~~~~~~--~~--~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Ge 467 (553)
+++++++.+.+.+.++ ..+++.||+||+++++....... .. ...++|.|+++++++|++ +++ .++++|+.||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~--~~~~~g~~Ge 320 (408)
T TIGR01733 244 EALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD-DDL--RPVPVGVVGE 320 (408)
T ss_pred ccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-CCC--CCCCCCCceE
Confidence 9999999999999997 89999999999998775332221 11 157899999999999999 553 4556779999
Q ss_pred EEEecCCccccccCChhhhhhhccC-------C--ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhc
Q 008787 468 VCVRGKTLFSGYYKNPDLTRESIID-------G--WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCV 538 (553)
Q Consensus 468 i~v~~~~~~~gy~~~~~~~~~~~~~-------g--~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~ 538 (553)
|+++|++++.||+++++.+.+.|.. | ||+|||+|++|++|++++.||.+|+|++ +|++++|.+||++|..
T Consensus 321 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~-~G~~v~~~~ie~~l~~ 399 (408)
T TIGR01733 321 LYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKI-RGYRIELGEIEAALLR 399 (408)
T ss_pred EEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEe-CeEEechHHHHHHHhc
Confidence 9999999999999999999887722 2 9999999999999999999999999996 8999999999999999
Q ss_pred CcCcceEEE
Q 008787 539 APIIEDVSI 547 (553)
Q Consensus 539 ~p~V~~~~V 547 (553)
||.|.+|+|
T Consensus 400 ~~~v~~~~v 408 (408)
T TIGR01733 400 HPGVREAVV 408 (408)
T ss_pred CcchhhhcC
Confidence 999999986
No 108
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-51 Score=433.90 Aligned_cols=441 Identities=20% Similarity=0.215 Sum_probs=344.6
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEAC 121 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~ 121 (553)
.++.++|.++++++|+++|+.+. + +.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~ 73 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG----D-----RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGA 73 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 37899999999999999999863 3 58999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHH
Q 008787 122 NALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWD 201 (553)
Q Consensus 122 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (553)
+++|++++++++.++.+++.++++.+++++++++......+.+.. ...+....++.+++.... ....+.++++
T Consensus 74 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 146 (533)
T PRK07798 74 FKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVL-PRLPKLRTLVVVEDGSGN------DLLPGAVDYE 146 (533)
T ss_pred HhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHh-ccCCCccEEEEecCCccc------ccCCccccHH
Confidence 999999999999999999999999999999999987666554432 223444555555543210 0011244677
Q ss_pred HHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhcc----ccCCC------CCCcEEEE
Q 008787 202 EFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ----FEDKM------TVDDVYLS 271 (553)
Q Consensus 202 ~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~----~~~~~------~~~~~~~~ 271 (553)
+++...... ..... ...+.++++|||||||.||+|+++|+++..........+.. ....+ ..+++++.
T Consensus 147 ~~~~~~~~~-~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (533)
T PRK07798 147 DALAAGSPE-RDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFP 224 (533)
T ss_pred HHHhccCCc-CCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEE
Confidence 766543221 11112 23345789999999999999999999987655432221100 00011 46789999
Q ss_pred ecChHHHHHHHHHHHHHHcCcEEEEec--C-ChHHHHHHhhhhcCcEEeechHHHHH-HHHHHHHHHHhhchHHHHHHHH
Q 008787 272 FLPLAHILDRVIEEYFFRRGASVGYYH--G-DLNALRDDLMELKPTLLAGVPRVFEK-IHEGIKKALEELRPLRRRIFDA 347 (553)
Q Consensus 272 ~~p~~~~~g~~~~~~~l~~g~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~-l~~~~~~~~~~~~~~~~~~~~~ 347 (553)
.+|++|..++...+.++..|+++++.+ . ++..+++.++++++|.+.++|..+.. +.+.+. ..
T Consensus 225 ~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~~------------- 290 (533)
T PRK07798 225 APPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-AR------------- 290 (533)
T ss_pred ecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-cc-------------
Confidence 999999999988888999999999988 4 89999999999999999999877643 322111 00
Q ss_pred HHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceee
Q 008787 348 LYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTV 426 (553)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~ 426 (553)
....++++|.+++||+++++++.+++++.+ +..+++.||+||++.....
T Consensus 291 ------------------------------~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 340 (533)
T PRK07798 291 ------------------------------GPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSG 340 (533)
T ss_pred ------------------------------ccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeeccccccccccc
Confidence 001124899999999999999999999988 7889999999999765554
Q ss_pred ccCCCccccCccC--CCCCCeeEEEeecCCCCCCCCCCCCC--CeEEEecCCccccccCChhhhhhhcc--C--CccccC
Q 008787 427 CFPDEMCMVGTAG--PVSVYSELRLEEVPEMGYSPLDDPPC--GEVCVRGKTLFSGYYKNPDLTRESII--D--GWFHTG 498 (553)
Q Consensus 427 ~~~~~~~~~~~~G--~~~~~~~v~i~~~~~~~~~~~~~~~~--Gei~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TG 498 (553)
...... ...| .+.++..+++++ +++... +.|+. |+|+ +++.++.||++++..+++.|. + +||+||
T Consensus 341 ~~~~~~---~~~g~~~~~~~~~~~i~~-~~~~~~--~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TG 413 (533)
T PRK07798 341 TVAKGA---VHTGGPRFTIGPRTVVLD-EDGNPV--EPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPG 413 (533)
T ss_pred CCCCCC---ccCCCCccCCCceEEEEC-CCCCCC--CCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcC
Confidence 322211 2233 788899999998 655533 34444 6665 566899999999999988873 3 499999
Q ss_pred ceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 499 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 499 D~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++|+||++++.||.+|+|+. +|++++|.+||++|.++|.|.+|+|+|.++
T Consensus 414 D~~~~~~~g~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 466 (533)
T PRK07798 414 DRARVEADGTITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVADALVVGVPD 466 (533)
T ss_pred cEEEEcCCCcEEEEccccceEec-CCEEeCHHHHHHHHHhCccceeEEEEeccC
Confidence 99999999999999999999996 899999999999999999999999999764
No 109
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-51 Score=435.13 Aligned_cols=418 Identities=21% Similarity=0.225 Sum_probs=331.6
Q ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEE
Q 008787 75 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 154 (553)
Q Consensus 75 ~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~ 154 (553)
+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++..+.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhccccccccCccEEEEecCCchHHHHH-----HhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecC
Q 008787 155 QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEM-----AVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTS 229 (553)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TS 229 (553)
+......+.+.... ...++............ .........+|+++..... .......+++++++|||
T Consensus 90 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TS 161 (509)
T PRK12406 90 HADLLHGLASALPA----GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTS 161 (509)
T ss_pred ccchhhhhhhhhhc----ccceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECC
Confidence 88766544332211 11111111110000000 0001122345555543321 12234568999999999
Q ss_pred CCCCCCceEEeccHhHHHHH---hhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC-ChHHHH
Q 008787 230 GTSGDPKGVVLTHETIATFV---SGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALR 305 (553)
Q Consensus 230 GtTG~pK~v~~th~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~ 305 (553)
||||.||+|.++|.+..... ......+ ++..++++++.+|++|..+....+.++..|+++++.+. +++.++
T Consensus 162 GtTG~PK~v~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 236 (509)
T PRK12406 162 GTTGHPKGVRRAAPTPEQAAAAEQMRALIY-----GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELL 236 (509)
T ss_pred CCCCCCceEEEechhHHHHHHHHHhhhhhc-----CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHH
Confidence 99999999998776543332 2222233 56788999999999999887776677888999888765 899999
Q ss_pred HHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCce
Q 008787 306 DDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRL 385 (553)
Q Consensus 306 ~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 385 (553)
+.++++++|++.++|+++..|++...... ..++ .+++
T Consensus 237 ~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-----------------------------------~~~~--------~~~l 273 (509)
T PRK12406 237 QLIERHRITHMHMVPTMFIRLLKLPEEVR-----------------------------------AKYD--------VSSL 273 (509)
T ss_pred HHHHHcCCeEEEccHHHHHHHHhCchhhc-----------------------------------ccCC--------CCce
Confidence 99999999999999999998864211100 0011 1489
Q ss_pred eEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCC
Q 008787 386 RLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPC 465 (553)
Q Consensus 386 r~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~ 465 (553)
|.+++||+++++++.+++.+.++..+++.||+||++.+++.........++++|.+.++.++++++ +++ .+++.|+.
T Consensus 274 ~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~--~~~~~g~~ 350 (509)
T PRK12406 274 RHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDG--RPLPQGEI 350 (509)
T ss_pred eEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCC--CCCCCCCc
Confidence 999999999999999999999999999999999999876655444444557899999999999999 554 34556789
Q ss_pred CeEEEecCCccc-cccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcce
Q 008787 466 GEVCVRGKTLFS-GYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIED 544 (553)
Q Consensus 466 Gei~v~~~~~~~-gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~ 544 (553)
|||+++|+.++. +|++++..+...+.+|||+|||+|++++||++++.||.+|+|++ +|.+++|.+||++|.++|+|.+
T Consensus 351 Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE~~l~~~~~v~~ 429 (509)
T PRK12406 351 GEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIEAVLHAVPGVHD 429 (509)
T ss_pred eEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcCCceEEEeecccceEEE-CCEEECHHHHHHHHHhCCCeeE
Confidence 999999998875 89999988888778999999999999999999999999999996 8999999999999999999999
Q ss_pred EEEEecCC
Q 008787 545 VSISYSSV 552 (553)
Q Consensus 545 ~~V~g~~~ 552 (553)
|+|+|.++
T Consensus 430 ~~v~~~~~ 437 (509)
T PRK12406 430 CAVFGIPD 437 (509)
T ss_pred EEEEeeec
Confidence 99998765
No 110
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.8e-50 Score=450.67 Aligned_cols=465 Identities=19% Similarity=0.262 Sum_probs=370.3
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
+...++.++|.+.++++|+++|+... . ..+.++++||+|+.+++.++|.+|.++|+++||+|+|+++|+++|+++.
T Consensus 424 ~~~~Tl~dll~~~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~ 499 (1452)
T PTZ00297 424 AGVRSLGEMWERSVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILE 499 (1452)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34469999999999999999999642 1 1244678999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHH-HHHHhhCCcee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQ-KEMAVQTGIKP 197 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (553)
+||+++|++++|+++ +.+++.+++++++++++|++.+....+.+... ..++.++++++..... .......+...
T Consensus 500 lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~~Lr~IIv~d~~~~~~~~~~~~~~~i~~ 574 (1452)
T PTZ00297 500 VACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---RKLETVVYTHSFYDEDDHAVARDLNITL 574 (1452)
T ss_pred HHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---cCCcEEEEECCCcccccccccccCCcce
Confidence 999999999999975 46789999999999999999888776655432 3677888886421100 00000112346
Q ss_pred eeHHHHHhccccccc-ccCCCCCCCeEEEEe---cCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEec
Q 008787 198 YSWDEFLHLGKVNEM-EILPPQPFNICTIMY---TSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFL 273 (553)
Q Consensus 198 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~---TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (553)
++|++++..+..... ......++|++.|+| ||||||.||||++||+|++..+........ ......+|++++++
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~--~~~~~~~D~~Ls~L 652 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGV--LPSSFKKHLMVHFT 652 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhcc--ccCCCCCCEEEEec
Confidence 789999887642111 122346788999986 999999999999999999999887643210 01245679999999
Q ss_pred ChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 008787 274 PLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKL 353 (553)
Q Consensus 274 p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
|++|+++....+.+++.|+++.. .+++.+++.|++++||+++++|.+|+++.+.+.+.....+.+...+++++.+.+.
T Consensus 653 PLaHI~er~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~ 730 (1452)
T PTZ00297 653 PFAMLFNRVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRS 730 (1452)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999997767778899999864 3789999999999999999999999999998888888888899999999999887
Q ss_pred HHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCC--CCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCC
Q 008787 354 AWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGA--PLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDE 431 (553)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~--~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~ 431 (553)
..+..+ .....+++++.|+++++.+|.++|.+++||+ +++..+.. +++++.+||.||.. +.+....
T Consensus 731 ~~~~~g---~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i~i~~g~glTE~~---~~~~~~~ 798 (1452)
T PTZ00297 731 RLINIH---RRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HISVCYVPCLREVF---FLPSEGV 798 (1452)
T ss_pred HHHhcC---CCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------CceEEEecceEEee---eecCCCC
Confidence 665543 2345688999999999999999999999984 55544433 67789999999942 3333333
Q ss_pred ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEE
Q 008787 432 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKI 511 (553)
Q Consensus 432 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~ 511 (553)
.. ..|.|+|++++|+.++++.+.. +..|||++++ .++|+.|++. .+||+ +||+|+|
T Consensus 799 ~~---~~G~PlpgvEvKI~~~~E~~~~----~~~GEIlvr~-------~kdpe~T~e~-~~gW~---------~dG~L~I 854 (1452)
T PTZ00297 799 FC---VDGTPAPSLQVDLEPFDEPSDG----AGIGQLVLAK-------KGEPRRTLPI-AAQWK---------RDRTLRL 854 (1452)
T ss_pred cc---cCCeecCceEEEEcccccccCC----CCCCeEEEEE-------CCChHHHHHh-hCcCc---------cCCeEEE
Confidence 22 2399999999999984443321 2369999964 4889988874 46775 6999999
Q ss_pred EecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 512 IDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 512 ~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
.||.+|+|++++|++|.|..||+.+..+|.|.+++|+|++.
T Consensus 855 idRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~ 895 (1452)
T PTZ00297 855 LGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPS 895 (1452)
T ss_pred EeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCC
Confidence 99999999999999999999999999999999999999874
No 111
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-51 Score=438.57 Aligned_cols=426 Identities=18% Similarity=0.222 Sum_probs=335.2
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
|.++.+.|..++..+|+.+++... ++ .+.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la 73 (545)
T PRK07768 1 MSRFTEKMYANARTSPRGMVTGEP---DA----PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQG 73 (545)
T ss_pred CchHHHHHHHHhhCCCcceEEecC---CC----ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHH
Confidence 457889999999999999998765 43 26899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHH-------HHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhC
Q 008787 121 CNALSLICVPLYDTLGPGAV-------NFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQT 193 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l-------~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (553)
|+++|++++++++..+.+++ ..+++.++++.+++++........ ....
T Consensus 74 ~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~------------------------ 128 (545)
T PRK07768 74 LWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPV-LEEK------------------------ 128 (545)
T ss_pred HHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhh-hccc------------------------
Confidence 99999999999988776544 456777899999988765432211 1000
Q ss_pred CceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCC-cEEEEe
Q 008787 194 GIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVD-DVYLSF 272 (553)
Q Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 272 (553)
....++++++..... .......++++++++|||||||.||+|+++|+++...+......+ ++..+ |++++.
T Consensus 129 ~~~~~~~~~l~~~~~---~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~d~~~~~ 200 (545)
T PRK07768 129 GIRVLTVADLLAADP---IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-----EFDVETDVMVSW 200 (545)
T ss_pred CCceeehhhhcccCC---CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-----CCCCCCceeEEe
Confidence 011334455443221 122344678999999999999999999999999998877665554 55655 899999
Q ss_pred cChHHHHHHHH-HHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHH
Q 008787 273 LPLAHILDRVI-EEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFD 346 (553)
Q Consensus 273 ~p~~~~~g~~~-~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (553)
+|++|.+++.. +..++..|++++++.. ++..+.+.+++++++++.++|..+..+.+.+.+....
T Consensus 201 ~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------- 270 (545)
T PRK07768 201 LPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKP---------- 270 (545)
T ss_pred CCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccc----------
Confidence 99999999875 5557899999888753 6788999999999999888777776655432111000
Q ss_pred HHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHh---cCC---ceEeeeccccC
Q 008787 347 ALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVT---CCA---FLVQGYGLTET 420 (553)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~---~~~---~i~~~YG~tE~ 420 (553)
...++ +++|.+++||+++++++.+++.+. +|. .+++.||+||+
T Consensus 271 -----------------------~~~~~--------~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~ 319 (545)
T PRK07768 271 -----------------------GAFDL--------SSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEA 319 (545)
T ss_pred -----------------------cCCCc--------hheeeEEeccCCCCHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 00111 389999999999999999998774 555 49999999999
Q ss_pred CCceeeccCCC-------------------------ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCc
Q 008787 421 CGPTTVCFPDE-------------------------MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTL 475 (553)
Q Consensus 421 g~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~ 475 (553)
+..+....... .....++|+|++++++++++ +++. ++++++.|||+++|+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~--~~~~g~~Gel~v~~~~~ 396 (545)
T PRK07768 320 TLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQ--VLPPRGVGVIELRGESV 396 (545)
T ss_pred ceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCC--CCCCCCEEEEEEccCcc
Confidence 87554332210 11235899999999999999 5554 45567899999999999
Q ss_pred cccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 476 FSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 476 ~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
+.||++++........+|||+|||+|++++||+++++||.+|+|++ +|++++|.+||+.|.+||+|.+++|+|.+
T Consensus 397 ~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~ 471 (545)
T PRK07768 397 TPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIM-AGRNIYPTDIERAAARVEGVRPGNAVAVR 471 (545)
T ss_pred cccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEE-CCEecCHHHHHHHHHhCcccccceEEEEE
Confidence 9999986655444446889999999999999999999999999997 89999999999999999999998888754
No 112
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-51 Score=430.42 Aligned_cols=414 Identities=21% Similarity=0.243 Sum_probs=330.9
Q ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEE
Q 008787 75 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 154 (553)
Q Consensus 75 ~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~ 154 (553)
+.+||.||.+.+.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCC
Q 008787 155 QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGD 234 (553)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 234 (553)
+......+.+...........+....... .....|.+...... .......++.++++|||||||.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG~ 154 (502)
T PRK08276 90 SAALADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQP----DTPIADETAGADMLYSSGTTGR 154 (502)
T ss_pred ccchhhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCC----CCCCCCCCcceEEEECCCCCCC
Confidence 98766554332211111334444432211 11234444433221 1112355678999999999999
Q ss_pred CceEEeccHhHHHHHh--hchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC-ChHHHHHHhhhh
Q 008787 235 PKGVVLTHETIATFVS--GVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-DLNALRDDLMEL 311 (553)
Q Consensus 235 pK~v~~th~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-~~~~~~~~i~~~ 311 (553)
||+|.++|.++..... ....... .......++++++..|++|.+++...+.++..|+++++.+. ++..+++.++++
T Consensus 155 PK~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 233 (502)
T PRK08276 155 PKGIKRPLPGLDPDEAPGMMLALLG-FGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERY 233 (502)
T ss_pred CceEEEccCCcchhhhhHHhhhhhh-hcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHh
Confidence 9999999877654322 1111110 00122467899999999999998887788999999988876 899999999999
Q ss_pred cCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEc
Q 008787 312 KPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISG 391 (553)
Q Consensus 312 ~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~g 391 (553)
++|++.++|+++..+++..... .+.+++ +++|.+++|
T Consensus 234 ~~t~~~~~P~~~~~l~~~~~~~-----------------------------------~~~~~~--------~~lr~i~~~ 270 (502)
T PRK08276 234 RVTHSQLVPTMFVRMLKLPEEV-----------------------------------RARYDV--------SSLRVAIHA 270 (502)
T ss_pred CCeEEEehHHHHHHHHhCcccc-----------------------------------CCCCCc--------ccceEEEec
Confidence 9999999999998886421100 011112 389999999
Q ss_pred CCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEe
Q 008787 392 GAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVR 471 (553)
Q Consensus 392 G~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~ 471 (553)
|++++.++.+++.+.++..+++.||+||++.+++..........+++|.|+ +..+++++ +++. +++.|+.|||+++
T Consensus 271 g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~--~~~~g~~Gel~v~ 346 (502)
T PRK08276 271 AAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGN--ELPPGEIGTVYFE 346 (502)
T ss_pred CCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCC--CCcCCCceEEEEE
Confidence 999999999999998899999999999999876665443334447899999 78999998 5543 4556789999999
Q ss_pred cCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEec
Q 008787 472 GKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYS 550 (553)
Q Consensus 472 ~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~ 550 (553)
|++++.||+++++.+...+ .+|||+|||+|+++++|.+++.||.+|+|++ +|.++++.+||.+|.+||+|.+|+|+|.
T Consensus 347 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~iE~~i~~~~~v~~~~v~~~ 425 (502)
T PRK08276 347 MDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIIS-GGVNIYPQEIENLLVTHPKVADVAVFGV 425 (502)
T ss_pred CCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeC
Confidence 9999999999999999988 4599999999999999999999999999996 8999999999999999999999999987
Q ss_pred CC
Q 008787 551 SV 552 (553)
Q Consensus 551 ~~ 552 (553)
.+
T Consensus 426 ~~ 427 (502)
T PRK08276 426 PD 427 (502)
T ss_pred CC
Confidence 64
No 113
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=8.6e-52 Score=433.98 Aligned_cols=387 Identities=18% Similarity=0.138 Sum_probs=286.5
Q ss_pred eCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchh------hhhhhccccccccCccEEEEecC
Q 008787 108 GANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK------VKELLSPDCRSAQRLRVMVCFTS 181 (553)
Q Consensus 108 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 181 (553)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. ...+.+... . .....++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~ 78 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVE-A-APAKAIVLPAA 78 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhh-c-ccceEEEEecc
Confidence 589999999999999999999999999999999999999999999998642 111111111 0 11122222111
Q ss_pred CchHHHHHHhhCCceeeeHHHHHhcccc------cccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhh
Q 008787 182 LTAEQKEMAVQTGIKPYSWDEFLHLGKV------NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLF 255 (553)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~ 255 (553)
.... .........+|.+++..... .........++++++|+|||||||.||+|++||.+++.........
T Consensus 79 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 79 GEPV----AVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred Cccc----CCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 1000 00000112356665532110 0111112356899999999999999999999999987765443333
Q ss_pred hccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHH
Q 008787 256 LDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKA 333 (553)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~ 333 (553)
+ ++..+|++++.+|++|.+++...+.++..|+++++.+. ++..+++.|+++++|++.++|+++..|++....
T Consensus 155 ~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 155 M-----DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred c-----CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 3 57788999999999999997766778999999998864 788999999999999999999999988642100
Q ss_pred HHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc--CCce
Q 008787 334 LEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFL 411 (553)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~i 411 (553)
.....++ ++||.+++||+++++++.+++++.+ +.++
T Consensus 229 ----------------------------------~~~~~~~--------~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~ 266 (499)
T PLN03051 229 ----------------------------------AMEGLDW--------SKLRVFASTGEASAVDDVLWLSSVRGYYKPV 266 (499)
T ss_pred ----------------------------------ccccCCc--------hhheEEEecCCCCCHHHHHHHHHhcccccee
Confidence 0000111 3899999999999999998887743 4789
Q ss_pred EeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCc--cccccCChhhhhhh
Q 008787 412 VQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTL--FSGYYKNPDLTRES 489 (553)
Q Consensus 412 ~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~--~~gy~~~~~~~~~~ 489 (553)
++.||+||++..............+++|+|.++++++|+| +++...+.+.++.|||+++||.+ +.||++++ .+ +.
T Consensus 267 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~-~~ 343 (499)
T PLN03051 267 IEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HD-KV 343 (499)
T ss_pred EeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccccCCc-cc-ce
Confidence 9999999987543332222222347899999999999999 66655544433689999999976 57999765 33 33
Q ss_pred ccCC----------ccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhc-CcCcceEEEEecCC
Q 008787 490 IIDG----------WFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCV-APIIEDVSISYSSV 552 (553)
Q Consensus 490 ~~~g----------~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~-~p~V~~~~V~g~~~ 552 (553)
+.+| ||+|||+|++|+||+|+++||.+|+|++ +|++|+|.|||++|.+ ||+|.+|+|+|.++
T Consensus 344 ~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d 416 (499)
T PLN03051 344 YYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIAETAAVGVAP 416 (499)
T ss_pred eeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcceEEEEEecC
Confidence 4344 6899999999999999999999999996 8999999999999986 99999999999876
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.5e-51 Score=421.94 Aligned_cols=378 Identities=25% Similarity=0.342 Sum_probs=315.5
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 78 TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 78 Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCce
Q 008787 158 KVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKG 237 (553)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~ 237 (553)
...... . ...+..+................+++++++|||||||.||+
T Consensus 81 ~~~~~~--------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 81 LEEKDF--------------Q------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred ccccce--------------e------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 321100 0 00111111111111111223456789999999999999999
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecCChHHHHHHhhhhcCcEEe
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHGDLNALRDDLMELKPTLLA 317 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~i~~~~~t~l~ 317 (553)
|.++|.++...+......+ ++..+|++++..|++|.+++...+.++..|+++++.+.. ..+++.++++++|++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL-----GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc-----CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEE
Confidence 9999999998888776665 778899999999999999987777889999999888653 3899999999999999
Q ss_pred echHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCH
Q 008787 318 GVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLST 397 (553)
Q Consensus 318 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~ 397 (553)
++|.++..+.+.... ..++|.+++||+++++
T Consensus 203 ~~P~~l~~l~~~~~~-------------------------------------------------~~~l~~~~~~G~~~~~ 233 (436)
T TIGR01923 203 LVPTQLNRLLDEGGH-------------------------------------------------NENLRKILLGGSAIPA 233 (436)
T ss_pred eHHHHHHHHHhCcCC-------------------------------------------------CCceEEEEECCCCCCH
Confidence 999999887642100 0279999999999999
Q ss_pred HHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccc
Q 008787 398 EVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFS 477 (553)
Q Consensus 398 ~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~ 477 (553)
++.++++.. +.++++.||+||++...+...........++|.+++++++++.. ++. ++.|||+++|+.++.
T Consensus 234 ~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~-------~~~Gel~v~~~~~~~ 304 (436)
T TIGR01923 234 PLIEEAQQY-GLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKV-DNK-------EGHGEIMVKGANLMK 304 (436)
T ss_pred HHHHHHHHh-CCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEe-CCC-------CCceEEEEECCccch
Confidence 999988764 99999999999998866654433322223589999999999854 222 167999999999999
Q ss_pred cccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 478 GYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 478 gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
||+++++.+...+.+|||+|||+|++++||++++.||.+|+|++ +|+++++.+||++|.++|.|.+++|++...
T Consensus 305 gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 378 (436)
T TIGR01923 305 GYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQEAVVVPKPD 378 (436)
T ss_pred hhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCeeEEEEeCCcc
Confidence 99998888877778899999999999999999999999999997 899999999999999999999999998753
No 115
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.6e-51 Score=516.03 Aligned_cols=422 Identities=17% Similarity=0.173 Sum_probs=350.3
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.+.++++|+++|+++. ++ .+||+||.++++++|+.|.++|+++|++|+|+++++++++++++|
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~---~~------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~la 3789 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCL---DQ------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVG 3789 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcC---CC------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 468999999999999999999976 43 799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccc-cCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA-QRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
++++|++++|++|.++.+++.++++++++++++++............... .....++..++.
T Consensus 3790 vlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 3852 (4334)
T PRK05691 3790 SFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEV----------------- 3852 (4334)
T ss_pred HHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeeccc-----------------
Confidence 99999999999999999999999999999999999876543221111000 001111111111
Q ss_pred HHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHH
Q 008787 200 WDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHIL 279 (553)
Q Consensus 200 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 279 (553)
.........+.....+++.++++|||||||.||||+++|+++++.+......+ ++..+++++...++.+..
T Consensus 3853 ----~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~fd~ 3923 (4334)
T PRK05691 3853 ----QAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-----ALSEADVIAQTASQSFDI 3923 (4334)
T ss_pred ----ccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-----CCCccceEEEecCCchhH
Confidence 00010111222345678999999999999999999999999999988877666 788999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 008787 280 DRVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAW 355 (553)
Q Consensus 280 g~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (553)
+....+.++..|+++++++. ++..+++.++++++|++..+|+++..++.....
T Consensus 3924 s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~----------------------- 3980 (4334)
T PRK05691 3924 SVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ----------------------- 3980 (4334)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc-----------------------
Confidence 98888889999999998764 788999999999999999999999887532100
Q ss_pred HhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccCCC---
Q 008787 356 MNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFPDE--- 431 (553)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~~~--- 431 (553)
..++||.+++||+++++++.+.|.+.+ ++++++.||+||++..++......
T Consensus 3981 -------------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~ 4035 (4334)
T PRK05691 3981 -------------------------ALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLAST 4035 (4334)
T ss_pred -------------------------cCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccc
Confidence 013899999999999999999887765 788999999999988665443221
Q ss_pred ccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-c-------CCccccCceEEE
Q 008787 432 MCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-I-------DGWFHTGDIGQI 503 (553)
Q Consensus 432 ~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~-------~g~~~TGD~g~~ 503 (553)
......+|+|+++.++.|+| +.+. +++.|..|||+|+|+.+++||+++|+.|+++| . ++||+|||+|++
T Consensus 4036 ~~~~~~iG~p~~~~~~~v~d-~~~~--~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~ 4112 (4334)
T PRK05691 4036 RGSYLPIGSPTDNNRLYLLD-EALE--LVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARR 4112 (4334)
T ss_pred cCCcCCCCCccCCCEEEEEC-CCCC--CCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceee
Confidence 11224699999999999998 5444 45566899999999999999999999999998 2 359999999999
Q ss_pred ccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEe
Q 008787 504 LPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISY 549 (553)
Q Consensus 504 ~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g 549 (553)
++||.|+++||.|+.||+ +|++|.+.|||++|.++|+|.+|+|+.
T Consensus 4113 ~~dG~l~~~GR~d~qvki-~G~riel~eIE~~l~~~~~v~~a~v~~ 4157 (4334)
T PRK05691 4113 RSDGVLEYVGRIDHQVKI-RGYRIELGEIEARLHEQAEVREAAVAV 4157 (4334)
T ss_pred cCCCcEEEecccCCcEEe-ceEEecHHHHHHHHHhCCCccEEEEEE
Confidence 999999999999999998 799999999999999999999998864
No 116
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.3e-51 Score=514.75 Aligned_cols=419 Identities=21% Similarity=0.255 Sum_probs=350.4
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.++|.++++++|+++|+++. + ..+||+||.++++++|+.|++.|+++|++|+++++++.++++++||
T Consensus 1130 ~~~l~~~~~~~a~~~p~~~Al~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~la 1200 (4334)
T PRK05691 1130 QAWLPELLNEQARQTPERIALVWD---G------GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLA 1200 (4334)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEEC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 467999999999999999999875 3 3799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
++++|++++|+++..+.+++.++++++++++++++......+... ... ..+.++... .
T Consensus 1201 ilkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~-----~~~-~~~~~~~~~----------------~ 1258 (4334)
T PRK05691 1201 ILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA-----EGV-SAIALDSLH----------------L 1258 (4334)
T ss_pred HHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc-----cCc-eEEeecccc----------------c
Confidence 999999999999999999999999999999999988765433111 011 111111110 0
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
.. .....+.....++++++++|||||||.||||+++|+++.+.+......+ ++..+++++...|+.|..+
T Consensus 1259 ~~-----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~s 1328 (4334)
T PRK05691 1259 DS-----WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATY-----ALDDSDVLMQKAPISFDVS 1328 (4334)
T ss_pred cc-----cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHHHH
Confidence 00 0011122234678999999999999999999999999999888766665 7889999999999999888
Q ss_pred HHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 281 RVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
+..++.++..|+++++.+. ++..+++.++++++|++.++|+++..|.+....
T Consensus 1329 ~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~------------------------ 1384 (4334)
T PRK05691 1329 VWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA------------------------ 1384 (4334)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc------------------------
Confidence 8778889999999999753 789999999999999999999999987541100
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceEeeeccccCCCceeeccC-CCccc
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLVQGYGLTETCGPTTVCFP-DEMCM 434 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~tE~g~~~~~~~~-~~~~~ 434 (553)
...++||.+++||+++++++.+.|.+.+ ++.+++.||+||++..++.... .....
T Consensus 1385 -----------------------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 1441 (4334)
T PRK05691 1385 -----------------------AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGE 1441 (4334)
T ss_pred -----------------------ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCC
Confidence 0014899999999999999999998877 6889999999999876654321 22233
Q ss_pred cCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc------C--CccccCceEEEccC
Q 008787 435 VGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII------D--GWFHTGDIGQILPN 506 (553)
Q Consensus 435 ~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~------~--g~~~TGD~g~~~~d 506 (553)
..++|+|+++++++|+| +++ .+++.|+.|||+|+|+.+++||+++|+.+.+.|. + +||+|||+|++++|
T Consensus 1442 ~~~iG~p~~~~~~~i~d-~~~--~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~d 1518 (4334)
T PRK05691 1442 RSPIGRPLGNVLCRVLD-AEL--NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNAD 1518 (4334)
T ss_pred CCcccceeCCCEEEEEC-CCC--CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCC
Confidence 46899999999999999 554 4456679999999999999999999999999882 1 39999999999999
Q ss_pred CcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecC
Q 008787 507 GVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSS 551 (553)
Q Consensus 507 G~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~ 551 (553)
|.++++||.|++||+ +|++|.|.|||++|.+||+|.+|+|++..
T Consensus 1519 G~l~~~GR~d~qiki-~G~rie~~eIE~~l~~~~~V~~a~v~~~~ 1562 (4334)
T PRK05691 1519 GALEYLGRLDQQVKL-RGFRVEPEEIQARLLAQPGVAQAAVLVRE 1562 (4334)
T ss_pred CCEEEecccCcEEEE-CCEEcCHHHHHHHHHhCCCcceEEEEEee
Confidence 999999999999998 79999999999999999999999999754
No 117
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-50 Score=453.41 Aligned_cols=431 Identities=14% Similarity=0.131 Sum_probs=317.4
Q ss_pred CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH
Q 008787 39 SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM 118 (553)
Q Consensus 39 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~ 118 (553)
....++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|++.|+++||+|+|+++|++++++++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~----~-----~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~ 514 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD----G-----RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAI 514 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34568999999999999999999864 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceee
Q 008787 119 EACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPY 198 (553)
Q Consensus 119 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (553)
+||+++|++++|++|. .++.++++.++++++|++......+... ...+++++......... .......
T Consensus 515 lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~-------~~~iiv~~~~~~~~~~~--~~~~~~~ 582 (994)
T PRK07868 515 AALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL-------PGRVLVLGGGESRDLDL--PDDADVI 582 (994)
T ss_pred HHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-------CceEEEecCCccccccC--Ccchhhh
Confidence 9999999999999984 6799999999999999987766544221 12344443211000000 0000011
Q ss_pred eHHHHHhcccccc--cccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH
Q 008787 199 SWDEFLHLGKVNE--MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 199 ~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
.++++.......+ ....+..++++++|+|| ||||.||++.++|.++..........+ .+..+|++++.+|++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-----~l~~~d~~L~~~Pl~ 656 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-----ALDRRDTVYCLTPLH 656 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-----CCCCCCeEEEecChH
Confidence 1111110000000 01112236889999999 577777887788877655443333333 677899999999999
Q ss_pred HHHHHHHHHH-HHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 277 HILDRVIEEY-FFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 277 ~~~g~~~~~~-~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
|.+++...+. ++..|+++++.+. +++.+++.|+++++|+++++|+++..|++....
T Consensus 657 h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~---------------------- 714 (994)
T PRK07868 657 HESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAF---------------------- 714 (994)
T ss_pred HHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCC----------------------
Confidence 9999976555 4555666666655 999999999999999999999999988642000
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcC-CceEeeeccccCCCceeeccCCCcc
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCC-AFLVQGYGLTETCGPTTVCFPDEMC 433 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~~YG~tE~g~~~~~~~~~~~~ 433 (553)
... ..+++|.++. +.+++++.+.+.+.++ +++++.||+||++..... .. ..
T Consensus 715 ---------------~~~--------~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~-~~--~~ 766 (994)
T PRK07868 715 ---------------VLH--------GNHPVRLFIG--SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN-VS--GA 766 (994)
T ss_pred ---------------ccC--------CCCceEEEec--CCCCHHHHHHHHHHhCchheeeeeecccccccccc-cC--CC
Confidence 000 0137898763 3499999999999886 789999999998754432 21 12
Q ss_pred ccCccCCCCCCe-eEEEeec---------CCCC-CCCCCCCCCCeEEEecCCccccccCChhhhhh--hc--cCCccccC
Q 008787 434 MVGTAGPVSVYS-ELRLEEV---------PEMG-YSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRE--SI--IDGWFHTG 498 (553)
Q Consensus 434 ~~~~~G~~~~~~-~v~i~~~---------~~~~-~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~--~~--~~g~~~TG 498 (553)
..+++|+|+|++ ++++... ++++ ...++.|+.|||+++++... +|+.+.. .| .+|||+||
T Consensus 767 ~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~~-----~p~~t~~~~~~~~~dgw~~TG 841 (994)
T PRK07868 767 KIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGPI-----DPTASVKRGVFAPADTWISTE 841 (994)
T ss_pred CCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCCC-----ChhhhhHhcccccCCEEEecc
Confidence 347899999998 6776521 1122 13355689999999998532 3443322 24 37999999
Q ss_pred ceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 499 DIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 499 D~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|+|++|+||+|+|+||.+|+|++ +|.+|+|.|||++|.+||.|.+|+|+|.++
T Consensus 842 Dlg~~d~dG~l~~~GR~dd~Ik~-~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d 894 (994)
T PRK07868 842 YLFRRDDDGDYWLVDRRGSVIRT-ARGPVYTEPVTDALGRIGGVDLAVTYGVEV 894 (994)
T ss_pred ceEEEcCCCCEEEeccCCCEEEe-CCceEcHHHHHHHHhcCCCeeEEEEEeecC
Confidence 99999999999999999999996 788999999999999999999999999875
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-48 Score=378.48 Aligned_cols=439 Identities=19% Similarity=0.185 Sum_probs=341.8
Q ss_pred CcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 008787 40 DLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAME 119 (553)
Q Consensus 40 ~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~l 119 (553)
...++.+++...++++|+++|+++. +. .+++||+|+.+.++++|+.|+.+|++.||.|+++++|.++|+..+|
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~---~~----~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWl 147 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYE---GP----FQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWL 147 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEe---CC----CceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHH
Confidence 4589999999999999999999986 32 2589999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeee
Q 008787 120 ACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYS 199 (553)
Q Consensus 120 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (553)
+++++|++.+.||++...+.|.|-++.++++++|++.+..+.+.+...........+...+.... ..+..+
T Consensus 148 GLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~---------~~g~~~ 218 (649)
T KOG1179|consen 148 GLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSV---------PDGIES 218 (649)
T ss_pred hHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCC---------CchHHH
Confidence 99999999999999999999999999999999999999888777764333222233333332221 111223
Q ss_pred HHHHHhcccccc---cccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH
Q 008787 200 WDEFLHLGKVNE---MEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA 276 (553)
Q Consensus 200 ~~~l~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 276 (553)
+...++.....+ .......-.++++.+|||||||.||+.++||.-+...+..+...+ ++.++|+++..+|++
T Consensus 219 L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-----g~~~~DvvY~~lPLY 293 (649)
T KOG1179|consen 219 LLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-----GMTADDVVYTTLPLY 293 (649)
T ss_pred HHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEcchhH
Confidence 333333322222 122334677899999999999999999999999988888766666 899999999999999
Q ss_pred HHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 008787 277 HILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLA 354 (553)
Q Consensus 277 ~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
|+.|... ...++..|+|+++-.+ ++..+++.-.+|++|++...-.+.+-|+......-++.
T Consensus 294 Hsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~----------------- 356 (649)
T KOG1179|consen 294 HSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQ----------------- 356 (649)
T ss_pred HHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcC-----------------
Confidence 9999887 5568999999999887 99999999999999999999998888875322211111
Q ss_pred HHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCc-eEeeeccccCCCceeeccCCCcc
Q 008787 355 WMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAF-LVQGYGLTETCGPTTVCFPDEMC 433 (553)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~-i~~~YG~tE~g~~~~~~~~~~~~ 433 (553)
.++|..+ |.-+.++.++.|.++||.. |.+.||+||.... +.+.+...
T Consensus 357 ----------------------------HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~-~~N~d~~v- 404 (649)
T KOG1179|consen 357 ----------------------------HKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSN-LVNYDGRV- 404 (649)
T ss_pred ----------------------------ceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcce-eeeecCcc-
Confidence 3678777 6669999999999999876 9999999996544 33333221
Q ss_pred ccCccCC-------CCCCeeEEEeecC--------CCCCCCCCCCCCCeEEEe--cCCc---cccccCChhhhhhh----
Q 008787 434 MVGTAGP-------VSVYSELRLEEVP--------EMGYSPLDDPPCGEVCVR--GKTL---FSGYYKNPDLTRES---- 489 (553)
Q Consensus 434 ~~~~~G~-------~~~~~~v~i~~~~--------~~~~~~~~~~~~Gei~v~--~~~~---~~gy~~~~~~~~~~---- 489 (553)
+.+|+ ..|-.-+| +|+. ++--.++++||.|.+.-+ ..+. +.||.++.+.+++.
T Consensus 405 --GA~G~~~~~~~~l~p~~LIk-~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rD 481 (649)
T KOG1179|consen 405 --GACGFMSRLLKLLYPFRLIK-VDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRD 481 (649)
T ss_pred --ccccchhhhhhhccceEEEE-ecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHh
Confidence 33332 12222222 2211 122235678899966432 2233 78999977766553
Q ss_pred -cc--CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 490 -II--DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 490 -~~--~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|. |-||.|||+-.+|+.|+|||.+|..|.... +|++|+..|||++|....+++||.|+|+..
T Consensus 482 VFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRW-KGENVsTtEVe~~l~~~~~~~dv~VYGV~V 546 (649)
T KOG1179|consen 482 VFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRW-KGENVSTTEVEDVLSALDFLQDVNVYGVTV 546 (649)
T ss_pred hhccCcEEEeeCcEEEEecCCcEEEeccCCCceee-cCCcccHHHHHHHHhhhccccceeEEEEec
Confidence 43 349999999999999999999999999998 799999999999999999999999999864
No 119
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-48 Score=396.87 Aligned_cols=341 Identities=14% Similarity=0.116 Sum_probs=291.2
Q ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEE
Q 008787 75 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFV 154 (553)
Q Consensus 75 ~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~ 154 (553)
+++||.||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++.++++++++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 48999999999999999985 68999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCC
Q 008787 155 QDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGD 234 (553)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~ 234 (553)
++..... .. .....++++++++|||||||.
T Consensus 86 ~~~~~~~------------------------------------~~--------------~~~~~~~~~~~i~~TSGtTG~ 115 (414)
T PRK08308 86 GESDFTK------------------------------------LE--------------AVNYLAEEPSLLQYSSGTTGE 115 (414)
T ss_pred cCccccc------------------------------------cc--------------CCCCCCCCceEEEECCCCCCC
Confidence 7531100 00 001345788999999999999
Q ss_pred CceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC-ChHHHHHHhhhhc
Q 008787 235 PKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG-DLNALRDDLMELK 312 (553)
Q Consensus 235 pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~ 312 (553)
||+|.+||+++...+..+...+ ....+++++..+|++|.+|+.. ++.++..|+++++.+. ++..+++.+++++
T Consensus 116 PKgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~ 190 (414)
T PRK08308 116 PKLIRRSWTEIDREIEAYNEAL-----NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTP 190 (414)
T ss_pred CcEEEEehHhHHHHHHHHHHhh-----CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhC
Confidence 9999999999998877766555 5677899999999999999865 6678999999988776 9999999999999
Q ss_pred CcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcC
Q 008787 313 PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGG 392 (553)
Q Consensus 313 ~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG 392 (553)
+|+++++|.++..|.+.... ..+++.+++||
T Consensus 191 ~t~~~~~P~~~~~l~~~~~~-------------------------------------------------~~~l~~~~~~G 221 (414)
T PRK08308 191 QHILYAVPLMLHILGRLLPG-------------------------------------------------TFQFHAVMTSG 221 (414)
T ss_pred CeEEEcCHHHHHHHHhcCCc-------------------------------------------------cccccEEEEcc
Confidence 99999999999887642100 02688899999
Q ss_pred CCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEec
Q 008787 393 APLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRG 472 (553)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~ 472 (553)
+++++++.+.+++. +.++++.||+||++.+.... . .....++|+|+|++++++.+ + .++.|||++++
T Consensus 222 ~~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-~--~~~~~~~G~p~~~~~~~~~~-~--------~~~~gel~v~~ 288 (414)
T PRK08308 222 TPLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICP-D--MKSHLDLGNPLPHVSVSAGS-D--------ENAPEEIVVKM 288 (414)
T ss_pred CCCCHHHHHHHHHh-CChhhhccCccccCCeeecC-C--CCCCCccCccCCCeEEEEec-C--------CCCCceEEEEc
Confidence 99999999999887 67899999999998644322 1 12336899999999999875 2 23579999975
Q ss_pred CCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 473 KTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 473 ~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
. ++||+|||+|++|+||++++.||.+|+|++ +|++++|.+||+++.++|+|.+|+|++.++
T Consensus 289 ~------------------~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~ 349 (414)
T PRK08308 289 G------------------DKEIFTKDLGYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLRLPGVQEAVVYRGKD 349 (414)
T ss_pred C------------------CceEECCceEEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccC
Confidence 2 689999999999999999999999999997 899999999999999999999999998764
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-35 Score=322.50 Aligned_cols=409 Identities=22% Similarity=0.255 Sum_probs=326.5
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
..++.+.|...+.+.|+++|+... + ..+||.++..+++++|+.|.+.|+.+++.|+++.+.+.+++++++|
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~----~-----~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ 296 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRG----G-----QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLA 296 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecC----C-----CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHH
Confidence 378999999999999999888753 2 4799999999999999999999999999999999889999999999
Q ss_pred HHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCceeeeH
Q 008787 121 CNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIKPYSW 200 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (553)
++++|+..+|+++.++.+.+.++++.+++..+++.......... ... +..+... +
T Consensus 297 ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~----------------~ 351 (642)
T COG1020 297 VLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG--------LPG-LALDDAL----------------S 351 (642)
T ss_pred HHhcCCeEecCCCCChHHHHHHHHhhcCccEEEecccccccccc--------CCc-ccccccc----------------c
Confidence 99999999999999999999999999999999988332211100 000 1111100 0
Q ss_pred HHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH
Q 008787 201 DEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD 280 (553)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 280 (553)
......+. .....+++.++++|||||||.||||..+|+++.+........+ .....|+++...++.....
T Consensus 352 ----~~~~~~~~-~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-----~~~~~d~~l~~~s~~fD~~ 421 (642)
T COG1020 352 ----EIPDTDPI-PQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF-----GLDADDRVLALASLSFDAS 421 (642)
T ss_pred ----cCCccCcc-cccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc-----CCCcccEEeecCCcccchh
Confidence 00000000 1233568899999999999999999999999998666665555 7788889999999866666
Q ss_pred HHHHHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 008787 281 RVIEEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWM 356 (553)
Q Consensus 281 ~~~~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (553)
....+.++..|+++++.+. ++..+.+.+.++++|++..+|..+..+........ ...
T Consensus 422 ~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~-~~~------------------ 482 (642)
T COG1020 422 VFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPD-LIS------------------ 482 (642)
T ss_pred HHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhcc-ccC------------------
Confidence 6678889999999998875 89999999999999999999999988865300000 000
Q ss_pred hccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc--CCceEeeeccccCCCceeeccCCC-cc
Q 008787 357 NMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC--CAFLVQGYGLTETCGPTTVCFPDE-MC 433 (553)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~i~~~YG~tE~g~~~~~~~~~~-~~ 433 (553)
..+.+|.+++||+.++.++...+.... ...+.+.||.||+........... ..
T Consensus 483 ------------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~ 538 (642)
T COG1020 483 ------------------------PCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELE 538 (642)
T ss_pred ------------------------CcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccC
Confidence 002489999999999999999877665 467999999999655444332222 11
Q ss_pred ccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccC-CccccCceEEEccCCcEEEE
Q 008787 434 MVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIID-GWFHTGDIGQILPNGVVKII 512 (553)
Q Consensus 434 ~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~g~~~~dG~l~~~ 512 (553)
....+|+|+++..+++.+ ... .+++.+..||+++.|..+..||+++|+.+.+.|.. .+|+|||++++..||.+.++
T Consensus 539 ~~~piG~p~~n~~~~ild-~~~--~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~l 615 (642)
T COG1020 539 SRVPIGRPVANTQLYILD-QGL--RPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYL 615 (642)
T ss_pred CCCCcceeeCCCeEEEEC-CCC--CcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEe
Confidence 136899999999999998 433 55556688999999999999999999999999955 49999999999999999999
Q ss_pred ecccCceecCCceeecchhHHHHHhcCc
Q 008787 513 DRKKNLIKISQGEYVALEYLENVYCVAP 540 (553)
Q Consensus 513 GR~~d~i~~~~G~~~~~~~iE~~l~~~p 540 (553)
||.|+.+|+ .|+++.+.+||..+.++|
T Consensus 616 gr~D~qvki-~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 616 GRKDSQVKI-RGFRIELGEIEAALAEQP 642 (642)
T ss_pred ccccceeEe-ceEecCcHHHHHHHhcCC
Confidence 999999998 699999999999998875
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-36 Score=304.12 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=209.7
Q ss_pred CCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEE
Q 008787 216 PPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVG 295 (553)
Q Consensus 216 ~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~ 295 (553)
...++++++++|||||||.||+|.++|.++..........+ ...++++..+|++|.+|+...+.++..|++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-------~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v 103 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL-------GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPV 103 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc-------CCCCeEEEECChHHHHHHHHHHHHHHcCCeEE
Confidence 34568999999999999999999999999988776544332 34568899999999999887778888999887
Q ss_pred Eec----CChHHHHHHhhhhc--CcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHH
Q 008787 296 YYH----GDLNALRDDLMELK--PTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLA 369 (553)
Q Consensus 296 ~~~----~~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (553)
+.. .++..+++.+++++ .++...+|..+..++.....
T Consensus 104 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~------------------------------------- 146 (358)
T PRK07824 104 ELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA------------------------------------- 146 (358)
T ss_pred ecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-------------------------------------
Confidence 732 28999999999998 45566678776655321000
Q ss_pred HHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEE
Q 008787 370 DLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRL 449 (553)
Q Consensus 370 ~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i 449 (553)
. ...+++|.+++||+++++++.+++.+. ++++++.||+||++..+ ...|.|++++++++
T Consensus 147 -~--------~~~~~l~~i~~gG~~l~~~~~~~~~~~-~~~v~~~YG~TE~~~~~-----------~~~G~~~~g~~v~i 205 (358)
T PRK07824 147 -T--------AALAELDAVLVGGGPAPAPVLDAAAAA-GINVVRTYGMSETSGGC-----------VYDGVPLDGVRVRV 205 (358)
T ss_pred -c--------CCcccceEEEECCCCCCHHHHHHHHhc-CCcEEecccCCccCCCc-----------CcCceeCCCCEEEe
Confidence 0 001389999999999999999998864 99999999999987543 23588999999998
Q ss_pred eecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhc-cCCccccCceEEEccCCcEEEEecccCceecCCceeec
Q 008787 450 EEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESI-IDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVA 528 (553)
Q Consensus 450 ~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~ 528 (553)
.+ |||+++|+.++.||+++++.. .+ .+|||+|||+|++ ++|++++.||.+|+|++ +|++|+
T Consensus 206 ~~--------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~-~G~~v~ 267 (358)
T PRK07824 206 ED--------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAIST-GGLTVL 267 (358)
T ss_pred cC--------------CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEE-CCEEEC
Confidence 43 999999999999999988643 34 6789999999999 89999999999999997 899999
Q ss_pred chhHHHHHhcCcCcceEEEEecCC
Q 008787 529 LEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 529 ~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
|.+||++|.+||+|.+|+|+|.++
T Consensus 268 p~eIE~~l~~~~~V~~~~vv~~~~ 291 (358)
T PRK07824 268 PQVVEAALATHPAVADCAVFGLPD 291 (358)
T ss_pred HHHHHHHHHhCCCcceEEEEecCC
Confidence 999999999999999999999765
No 122
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=2.3e-31 Score=273.91 Aligned_cols=446 Identities=15% Similarity=0.131 Sum_probs=316.8
Q ss_pred ccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCchhHHHHHHH
Q 008787 42 NTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEAMEA 120 (553)
Q Consensus 42 ~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~-gl~~gd~V~l~~~n~~~~~~~~lA 120 (553)
.+|.++|+.++.++|+.+|+... ++.+.+.+++||++|.+++.+++..|.+. -+++||.|++++++++|++++++|
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~ 846 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYA 846 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHH
Confidence 78999999999999999999987 77777779999999999999999999977 789999999999999999999999
Q ss_pred HHhcCCEEeeCCCCCCh------hHHHHHHhhcCceEEEEcchhhhhhhccccccc---cCccEEEEecCCchHHHHHHh
Q 008787 121 CNALSLICVPLYDTLGP------GAVNFILDHAEIDFVFVQDKKVKELLSPDCRSA---QRLRVMVCFTSLTAEQKEMAV 191 (553)
Q Consensus 121 ~~~~G~~~v~l~~~~~~------~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 191 (553)
|+.+|.+++|++|.... ..+..+++..++.+|+++.+....+.+...... ..+..+++.++...
T Consensus 847 Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~------- 919 (1363)
T KOG3628|consen 847 CLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE------- 919 (1363)
T ss_pred HHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch-------
Confidence 99999999999876533 458889999999999999887655543222111 11222233222211
Q ss_pred hCCceeeeHHHHHhcccc--cccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEE
Q 008787 192 QTGIKPYSWDEFLHLGKV--NEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVY 269 (553)
Q Consensus 192 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 269 (553)
+|..-..+... ...+..-.....+|++-+.--++|.--++.++|.++++.+...+..+ .+.....+
T Consensus 920 -------t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~-----~l~~~rpl 987 (1363)
T KOG3628|consen 920 -------TIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC-----QLYKSRPL 987 (1363)
T ss_pred -------hhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH-----ccccCCce
Confidence 11111111111 12223334677899999999999999999999999999999999988 67777778
Q ss_pred EEecChHHHHHHH-HHHHHHHcCcEEEEecC-----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHH
Q 008787 270 LSFLPLAHILDRV-IEEYFFRRGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRR 343 (553)
Q Consensus 270 ~~~~p~~~~~g~~-~~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~ 343 (553)
+...+.+.+.|+. +++..+++|.+.++++. ++..|+..|+++++.-++.+-..++.+.+.+....+..+...
T Consensus 988 ~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~g-- 1065 (1363)
T KOG3628|consen 988 LGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRG-- 1065 (1363)
T ss_pred EEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhh--
Confidence 8888888888876 57788999999888764 899999999999999999999998888765554433222100
Q ss_pred HHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc---CCc---e------
Q 008787 344 IFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC---CAF---L------ 411 (553)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~---~~~---i------ 411 (553)
.+. +...++..-+.....+.+-+.+.+ |.. +
T Consensus 1066 ----------------------------nn~---------s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~ 1108 (1363)
T KOG3628|consen 1066 ----------------------------NNT---------SSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSS 1108 (1363)
T ss_pred ----------------------------ccc---------ccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccc
Confidence 000 112222223333333444343333 111 1
Q ss_pred -------EeeeccccCCCceeec---cCC----------CccccCccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEe
Q 008787 412 -------VQGYGLTETCGPTTVC---FPD----------EMCMVGTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVR 471 (553)
Q Consensus 412 -------~~~YG~tE~g~~~~~~---~~~----------~~~~~~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~ 471 (553)
.+.|...|....-.-. +.+ ........|...+++++.|++ ++. ..++.+|+.||||+.
T Consensus 1109 r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Ivn-PEt-k~pc~dge~GEIW~~ 1186 (1363)
T KOG3628|consen 1109 RVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVN-PET-KGPCRDGELGEIWVN 1186 (1363)
T ss_pred cCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeC-Ccc-ccccccCCcceEEec
Confidence 2223222222110000 000 001113458888999999999 543 478889999999999
Q ss_pred cCCccccccCChhh-hhhhc----------cCCccccCceEEEcc------C----CcEEEEecccCceecCCceeecch
Q 008787 472 GKTLFSGYYKNPDL-TRESI----------IDGWFHTGDIGQILP------N----GVVKIIDRKKNLIKISQGEYVALE 530 (553)
Q Consensus 472 ~~~~~~gy~~~~~~-~~~~~----------~~g~~~TGD~g~~~~------d----G~l~~~GR~~d~i~~~~G~~~~~~ 530 (553)
|.+.+.+|+.-.+. ....| ..+|.||||+|++.. + .-||++|-.++.+.+ +|.+++|.
T Consensus 1187 S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl-~GL~h~p~ 1265 (1363)
T KOG3628|consen 1187 SAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLEL-NGLRHFPS 1265 (1363)
T ss_pred cccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeee-cCcccCcc
Confidence 99998887753221 11111 134999999999842 2 358999999999998 79999999
Q ss_pred hHHHHHh-cCcCcceEEEEecC
Q 008787 531 YLENVYC-VAPIIEDVSISYSS 551 (553)
Q Consensus 531 ~iE~~l~-~~p~V~~~~V~g~~ 551 (553)
+||+.+. .||.|..|+||--+
T Consensus 1266 DIE~TV~~vH~~I~~cavF~~~ 1287 (1363)
T KOG3628|consen 1266 DIETTVERVHPSIGGCAVFQAT 1287 (1363)
T ss_pred hHHHHHHHhcccccceeeEeeC
Confidence 9999995 69999999998643
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.97 E-value=9e-31 Score=262.02 Aligned_cols=232 Identities=17% Similarity=0.158 Sum_probs=182.1
Q ss_pred CCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCC--CCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEE
Q 008787 220 FNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKM--TVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGY 296 (553)
Q Consensus 220 ~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~ 296 (553)
+..++++|||||||.||+|.+||+++.+.+..+...+ ++ ...+++++.+|++|.+|+.+ .+.++..|+++++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~ 169 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-----GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQ 169 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-----CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEe
Confidence 3568999999999999999999999998887666554 34 33468999999999999864 5667888999988
Q ss_pred ecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHH
Q 008787 297 YHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFR 375 (553)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (553)
... ++..+++.++.+ |+++++|.+++.|.+.. .
T Consensus 170 ~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~---------------------------------------- 203 (386)
T TIGR02372 170 LAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----Y---------------------------------------- 203 (386)
T ss_pred cCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----c----------------------------------------
Confidence 765 778888887654 89999999998875410 0
Q ss_pred HHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCC-ceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCC
Q 008787 376 KVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCA-FLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPE 454 (553)
Q Consensus 376 ~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~ 454 (553)
..+++|. ++||+++++++.+.+++. +. .+++.||+||++++++.... ...|++.|+.++++ + +
T Consensus 204 -----~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~~------~~~~~~~p~~~~~~-~--~ 267 (386)
T TIGR02372 204 -----RLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREAP------DDPFRLLPDLACFA-D--T 267 (386)
T ss_pred -----CCCccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccCC------CCCcccCCCccccC-C--C
Confidence 0136775 678999999999999886 64 69999999999876554321 34567777766543 1 1
Q ss_pred CCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHH
Q 008787 455 MGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLEN 534 (553)
Q Consensus 455 ~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~ 534 (553)
+. + .|+ ..|++|||+|++|++|+|++.||.+|+|++ +|++|+|.+||+
T Consensus 268 ~~----------~---~g~------------------~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~-~G~~V~p~eIE~ 315 (386)
T TIGR02372 268 LS----------S---AGL------------------ARRLDLQDRLAWDKDGGFTILGRKDEILQV-GGVNVSPGHVRD 315 (386)
T ss_pred cc----------C---CCc------------------cceeecCceEEEcCCCcEEEecccCCEEEE-CCEEEcHHHHHH
Confidence 10 0 011 125899999999999999999999999997 899999999999
Q ss_pred HHhcCcCcceEEEEec
Q 008787 535 VYCVAPIIEDVSISYS 550 (553)
Q Consensus 535 ~l~~~p~V~~~~V~g~ 550 (553)
+|.+||+|.+|+|+..
T Consensus 316 ~l~~~p~V~~~~v~~~ 331 (386)
T TIGR02372 316 ILERNPRVRAAAVRLD 331 (386)
T ss_pred HHHcCCCceEEEEEcC
Confidence 9999999999998754
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.97 E-value=8e-31 Score=269.02 Aligned_cols=266 Identities=19% Similarity=0.183 Sum_probs=197.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHH-HHHHHHHHHcCcEEEE
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILD-RVIEEYFFRRGASVGY 296 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g-~~~~~~~l~~g~~~~~ 296 (553)
..++++.+++||||||.||++.+||.++..........+... ++..+|++++..++.+..+ +...+.+...|++++.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~--g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA--GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc--CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 456788899999999999999999999876644433322211 5677888887766544333 2234456778888877
Q ss_pred ecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHH
Q 008787 297 YHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFR 375 (553)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (553)
++. +++.+++.|++++||+++++|+++..|++.+........
T Consensus 151 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~------------------------------------- 193 (422)
T TIGR02155 151 ISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPA------------------------------------- 193 (422)
T ss_pred cCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcc-------------------------------------
Confidence 654 789999999999999999999999998764332100000
Q ss_pred HHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCC-ceeeccCCCccccCccCCCC--CCeeEEEeec
Q 008787 376 KVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCG-PTTVCFPDEMCMVGTAGPVS--VYSELRLEEV 452 (553)
Q Consensus 376 ~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~-~~~~~~~~~~~~~~~~G~~~--~~~~v~i~~~ 452 (553)
..++|.+++||+++++++.+.+++.||+++++.||+||+++ ........ ...|.++ ++..++|+|
T Consensus 194 ------~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~-----~~~g~~~~~~~~~~eivd- 261 (422)
T TIGR02155 194 ------QTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVE-----TQDGLHIWEDHFYPEIID- 261 (422)
T ss_pred ------cCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccc-----cCCCceEecCeeEEEEEC-
Confidence 02799999999999999999999999999999999999853 22221111 1123333 356677888
Q ss_pred CCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccC-C-----cEEEEecccCceecCCcee
Q 008787 453 PEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN-G-----VVKIIDRKKNLIKISQGEY 526 (553)
Q Consensus 453 ~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d-G-----~l~~~GR~~d~i~~~~G~~ 526 (553)
++++ .++++|+.|||++++. +...+..+||+|||+|+++++ | .+++.||.+|+|++ .|.+
T Consensus 262 ~~~g-~~v~~Ge~Gelvvt~~------------~~~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~-~G~~ 327 (422)
T TIGR02155 262 PHTG-EVLPDGEEGELVFTTL------------TKEALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLII-RGVN 327 (422)
T ss_pred CCCC-CCCCCCCeeEEEEecC------------CccccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEE-CCEE
Confidence 4333 4557789999999974 223345789999999999875 4 47899999999997 7999
Q ss_pred ecchhHHHHHhcCcCcceEEEE
Q 008787 527 VALEYLENVYCVAPIIEDVSIS 548 (553)
Q Consensus 527 ~~~~~iE~~l~~~p~V~~~~V~ 548 (553)
|+|.+||++|.+||+|.....+
T Consensus 328 v~p~eie~~l~~~~~v~~~~q~ 349 (422)
T TIGR02155 328 VFPTQLEEVILKMDELSPHYQL 349 (422)
T ss_pred ECHHHHHHHHHhCcCcCCCEEE
Confidence 9999999999999999843333
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.94 E-value=1.7e-25 Score=229.76 Aligned_cols=252 Identities=19% Similarity=0.166 Sum_probs=184.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEE
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGY 296 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~ 296 (553)
+.++++.+.+||||||.||++.+||.++..........+.. .++..+|+++...++.+..+... ...+...|++++.
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~--~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVS--QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHH--cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 45678899999999999999999999988766554433221 15778899998888877655443 4456777887643
Q ss_pred ecCChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHH
Q 008787 297 YHGDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRK 376 (553)
Q Consensus 297 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (553)
.+.....++.|++++++.+.++|+.+..|.+.+........
T Consensus 162 -~~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~-------------------------------------- 202 (445)
T TIGR03335 162 -EGKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPA-------------------------------------- 202 (445)
T ss_pred -CCchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcc--------------------------------------
Confidence 33455678999999999999999998887654332110000
Q ss_pred HHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCC--CCeeEEEeecCC
Q 008787 377 VKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVS--VYSELRLEEVPE 454 (553)
Q Consensus 377 ~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~--~~~~v~i~~~~~ 454 (553)
..++|.+++||+++++++.+++++.||+++++.||+||++ ++..+.. ..|..+ +...+.|+| ++
T Consensus 203 -----~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~-~~~~c~~-------~~g~h~~~d~~~vEIvD-p~ 268 (445)
T TIGR03335 203 -----ESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGT-MCGECQA-------VAGLHVPEDLVHLDVYD-PR 268 (445)
T ss_pred -----cCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhh-heEEecC-------CCCccccCCceEEEEEc-CC
Confidence 0279999999999999999999999999999999999986 3332211 123333 457788888 54
Q ss_pred CCCCCCCCCCCCeEEEecCCcc-----ccccCChhhhhhhccCCccccCceEEEcc-C----C----cEEEEecccCcee
Q 008787 455 MGYSPLDDPPCGEVCVRGKTLF-----SGYYKNPDLTRESIIDGWFHTGDIGQILP-N----G----VVKIIDRKKNLIK 520 (553)
Q Consensus 455 ~~~~~~~~~~~Gei~v~~~~~~-----~gy~~~~~~~~~~~~~g~~~TGD~g~~~~-d----G----~l~~~GR~~d~i~ 520 (553)
++ .++++|+.|||++++-... ...+ -|+|||++.+.. + | ++...||.+|+++
T Consensus 269 ~~-~~vp~Ge~GELvvT~L~~~~~r~~~Pli-------------RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~ 334 (445)
T TIGR03335 269 HQ-RFLPDGECGRIVLTTLLKPGERCGSLLI-------------NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIW 334 (445)
T ss_pred CC-CCCcCCCceEEEEEecCCCCccCCceEE-------------EeecCceEEEecCCCCCCCCCcceeCCCcccCceEE
Confidence 43 5667889999999875321 1111 289999998632 2 2 2445699999999
Q ss_pred cCCceeecchhHHHHHhcC
Q 008787 521 ISQGEYVALEYLENVYCVA 539 (553)
Q Consensus 521 ~~~G~~~~~~~iE~~l~~~ 539 (553)
+ .|.+++|.+||++|.++
T Consensus 335 ~-~g~~~~p~~ie~~l~~~ 352 (445)
T TIGR03335 335 I-SGVPFNRVDVERAVFQR 352 (445)
T ss_pred E-CCEEeCHHHHHHHHhcc
Confidence 9 79999999999999984
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=1.4e-24 Score=201.25 Aligned_cols=221 Identities=15% Similarity=0.036 Sum_probs=162.3
Q ss_pred HHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHHHHHHhcCC
Q 008787 48 FSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSL 126 (553)
Q Consensus 48 l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 126 (553)
|...++++|+++|+++. ++.+++.+++||+||.+++.++|+.|++ .|+++||+|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 46778889999999864 3322123579999999999999999998 6999999999999999999999999999999
Q ss_pred EEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecC--CchHHHHHHhhCCceeeeHHHHH
Q 008787 127 ICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS--LTAEQKEMAVQTGIKPYSWDEFL 204 (553)
Q Consensus 127 ~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~ 204 (553)
+++|++ .++++++++++.....+. . . ..++.+.. ..... . .....+..+|...+
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~ 134 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAA-G-----S--GEVVALSLDPLGRRV-A--GELPPGVIDFAPEV 134 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcc-c-----C--CceEEEeccccccCC-C--CCCCCcccchhhhh
Confidence 999995 678999999987766532 1 1 12222211 00000 0 00011234666655
Q ss_pred hcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHH-
Q 008787 205 HLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVI- 283 (553)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~- 283 (553)
........+.....++|+++++||||+ +|.+++... ..+ ++..+|+++ .+|++|.+|+..
T Consensus 135 ~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-----~l~~~D~~l-~~Pl~H~~gl~~~ 195 (227)
T TIGR03089 135 RVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-----GLPPGDRVL-VLAWTDLEDFLAT 195 (227)
T ss_pred hccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-----CCCCCCeEE-ecCCCchHHHHHH
Confidence 432222112213466899999999975 666665554 222 678899999 999999999975
Q ss_pred HHHHHHcCcEEEEecC-ChHHHHHHhhhhcCc
Q 008787 284 EEYFFRRGASVGYYHG-DLNALRDDLMELKPT 314 (553)
Q Consensus 284 ~~~~l~~g~~~~~~~~-~~~~~~~~i~~~~~t 314 (553)
++.++..|+++++.+. +++.+++.|+++|+|
T Consensus 196 ~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 196 LLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 6678999999888876 999999999999987
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.90 E-value=6.5e-22 Score=192.80 Aligned_cols=272 Identities=21% Similarity=0.205 Sum_probs=199.6
Q ss_pred cCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChH-HHHHHHHHHHHHHcCc
Q 008787 214 ILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLA-HILDRVIEEYFFRRGA 292 (553)
Q Consensus 214 ~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~g~~~~~~~l~~g~ 292 (553)
......++...|-.||||||+|+.+.+|+..+...+..+.+.+... +...+|++....-+. +..|+.....+-..|+
T Consensus 84 ~~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~--g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~ 161 (438)
T COG1541 84 DFAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSA--GVRKGDKVQNAYGYGLFTGGLGLHYGAERIGA 161 (438)
T ss_pred cccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHc--cCCCCCEEEEEeeeccccCCchhHHHHHhhCE
Confidence 3344566777799999999999999999999988888877766433 567777765554421 2222333444445666
Q ss_pred EEEEecC-ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHH
Q 008787 293 SVGYYHG-DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADL 371 (553)
Q Consensus 293 ~~~~~~~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (553)
+++-..+ +.+..++.|+.+++|++.++|+.+..|++.+.+.... .+.
T Consensus 162 ~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~--------------------------------~~~ 209 (438)
T COG1541 162 TVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGID--------------------------------PDK 209 (438)
T ss_pred EEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCC--------------------------------hhh
Confidence 6554444 8999999999999999999999999999877665310 000
Q ss_pred HHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEee
Q 008787 372 LAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEE 451 (553)
Q Consensus 372 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~ 451 (553)
.++|.+++|+++++++..+.+.+.||+..++.||+||..+.....+... ......-+...+.++|
T Consensus 210 -----------~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~~----~glhi~eD~~~~Ei~d 274 (438)
T COG1541 210 -----------LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTER----NGLHIWEDHFIFEIVD 274 (438)
T ss_pred -----------cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCcccccccc----cCCCcchhhceeeeec
Confidence 2899999999999999999999999999999999999977742222111 1111233456677788
Q ss_pred cCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccC----Cc-----EEEEecccCceecC
Q 008787 452 VPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN----GV-----VKIIDRKKNLIKIS 522 (553)
Q Consensus 452 ~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d----G~-----l~~~GR~~d~i~~~ 522 (553)
|+.+ ..+++|+.|||+++.-+- .. +.==-|+|||+..+.++ |. -.+.||.+|++++
T Consensus 275 -P~t~-e~l~dge~GelV~T~L~~--~~----------~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~- 339 (438)
T COG1541 275 -PETG-EQLPDGERGELVITTLTK--EG----------MPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIV- 339 (438)
T ss_pred -CCcC-ccCCCCCeeEEEEEeccc--cC----------cceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEE-
Confidence 4433 566788999999987431 10 11113899999999763 32 4789999999998
Q ss_pred CceeecchhHHHHHhcCcCcc---eEEEEe
Q 008787 523 QGEYVALEYLENVYCVAPIIE---DVSISY 549 (553)
Q Consensus 523 ~G~~~~~~~iE~~l~~~p~V~---~~~V~g 549 (553)
.|.+|+|..||.+|.+.+.+. +..+.+
T Consensus 340 ~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~ 369 (438)
T COG1541 340 RGVNVFPSQIERVLLQIPEVTPHYQIILTR 369 (438)
T ss_pred CCEEeCHHHHHHHHhcccCCCceEEEEEec
Confidence 599999999999999999998 555544
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.86 E-value=2e-20 Score=200.02 Aligned_cols=463 Identities=19% Similarity=0.114 Sum_probs=275.8
Q ss_pred ceeccccCCCCCCCC------CCcccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcC
Q 008787 24 VYRNLLASNGFPSVD------SDLNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASG 97 (553)
Q Consensus 24 ~~r~~~~~~~~~~~~------~~~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~g 97 (553)
-+++...-+.+|... ..+.++...+.+.+...|+.++..+... ...++.....||......++.+++.|.+.|
T Consensus 12 ~~~~~~~~d~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~ 90 (1032)
T KOG1178|consen 12 SLITYRQEDSLPDETKQIGFEQFMGTLEDSFRRELAEAPENTGHVIIPT-ASESGIIDSFTYRLIRLLSNIIAQFLVSLG 90 (1032)
T ss_pred eeeccccccccCChhhhhhhhhhhcchhhHHHHHHhhcccCCCceEeec-ccccccccchhhhhhhcccchhHHHhhhcc
Confidence 344444445555322 2356777788999999999998776432 334566678999999999999999999999
Q ss_pred CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCC----hhHHH---HHHhhcCceEEEEcchhhhhhhccccccc
Q 008787 98 AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLG----PGAVN---FILDHAEIDFVFVQDKKVKELLSPDCRSA 170 (553)
Q Consensus 98 l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~l~---~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (553)
...|+.|++++..+.++++..+++++.|..+++++|.++ ++.+. +.+......+ ......- ....+..
T Consensus 91 ~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i--~~~l~i~---~~~~~~~ 165 (1032)
T KOG1178|consen 91 SLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEI--VRRLNII---DILLNSL 165 (1032)
T ss_pred cccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheecccee--hhhhhhH---HHHhhcc
Confidence 999999999999999999999999999999999999998 22111 1111111111 1111000 0000000
Q ss_pred cCccEEEEecCCchHHHHHHhhCCceeeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHh
Q 008787 171 QRLRVMVCFTSLTAEQKEMAVQTGIKPYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVS 250 (553)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~ 250 (553)
.....+.. ..-.+..+..... .....-.-++..+++.||||+||.||+|..+|..+.+...
T Consensus 166 ~~~~sv~~-----------------~~~~f~~~~~~~~--~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fd 226 (1032)
T KOG1178|consen 166 FPKLSVET-----------------IADSFQMVLHNED--TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFD 226 (1032)
T ss_pred ccccchhh-----------------ccchhhhhhccCC--CcceeeecccccceEeecccccccccccchhHHHHHhhhh
Confidence 00000000 0011222221111 1112233566688999999999999999999999999888
Q ss_pred hchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHc-CcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHH
Q 008787 251 GVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRR-GASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEK 325 (553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~-g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~ 325 (553)
.....+ .....+++-.....+..-.......+++. |..+..+-. ++..+...+.+++++....+|++.++
T Consensus 227 w~~~~f-----~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~ 301 (1032)
T KOG1178|consen 227 WMFTTF-----PPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQL 301 (1032)
T ss_pred hccccC-----CcCccchhhhhheeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhh
Confidence 766655 45555554111112111112234445444 444444322 48899999999999999999999888
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHH
Q 008787 326 IHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRV 405 (553)
Q Consensus 326 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~ 405 (553)
++.........+. ....++ .+... .+.|+....+|++....+...+..
T Consensus 302 l~~~~~~~~~~l~-------------~~~~~~---------dl~~~----------~~~Lkl~~~~~ep~~v~l~~s~~~ 349 (1032)
T KOG1178|consen 302 LLAILTTSLPLLE-------------HAFSLS---------DLLTK----------RSCLKLVVLGGEPLLVSLYTSTFD 349 (1032)
T ss_pred hhhhcCcchhhhh-------------hhhhcc---------ccccc----------chhheeeeecCCccchhhhhhhhh
Confidence 7653322100000 000000 00000 037899999999999998885555
Q ss_pred hc-CCceEeeeccccCCCceeeccCCCc---cccCccCCCCCC-------eeEEEeecCCCCC--CCCCCCCCCeEEEec
Q 008787 406 TC-CAFLVQGYGLTETCGPTTVCFPDEM---CMVGTAGPVSVY-------SELRLEEVPEMGY--SPLDDPPCGEVCVRG 472 (553)
Q Consensus 406 ~~-~~~i~~~YG~tE~g~~~~~~~~~~~---~~~~~~G~~~~~-------~~v~i~~~~~~~~--~~~~~~~~Gei~v~~ 472 (553)
.+ -.-...-|++++..+......-... -....++.+... .-+.+.. ..+++ ..++.++.|..+..+
T Consensus 350 ~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~ 428 (1032)
T KOG1178|consen 350 LLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQNLS 428 (1032)
T ss_pred cccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCcccceeeccccccc
Confidence 44 1122333888887765553321110 000011111111 1111111 11111 111122233333334
Q ss_pred CCccccccCChhhhhhhc--c----CCccccCceEEEccCCcEEEEecccCceecCCceeecchhHHHHHhcCcCcceEE
Q 008787 473 KTLFSGYYKNPDLTRESI--I----DGWFHTGDIGQILPNGVVKIIDRKKNLIKISQGEYVALEYLENVYCVAPIIEDVS 546 (553)
Q Consensus 473 ~~~~~gy~~~~~~~~~~~--~----~g~~~TGD~g~~~~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~~p~V~~~~ 546 (553)
..+..|| ..++.....+ . +..|+|||+|+.-++|.+.++||.++.|++ +|.++...+|+.++..||.|.++.
T Consensus 429 ~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~-rG~Ri~L~ei~t~v~~~p~v~~~i 506 (1032)
T KOG1178|consen 429 SWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKD-RGVRIELGELNTVVEVHPDVKEAI 506 (1032)
T ss_pred ceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEE-ccEEEehhhhchhhccCcchhhhh
Confidence 4455552 3333222111 2 348999999988889999999999999998 799999999999999999999998
Q ss_pred EEecC
Q 008787 547 ISYSS 551 (553)
Q Consensus 547 V~g~~ 551 (553)
+.+.-
T Consensus 507 tl~~~ 511 (1032)
T KOG1178|consen 507 TLARE 511 (1032)
T ss_pred eeeee
Confidence 87653
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.82 E-value=7.1e-19 Score=182.54 Aligned_cols=446 Identities=15% Similarity=0.115 Sum_probs=301.9
Q ss_pred cccHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEeCCc--hhHHHH
Q 008787 41 LNTAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVS-ALRASGAEPGCRVGIYGANC--PQWVEA 117 (553)
Q Consensus 41 ~~~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~-~L~~~gl~~gd~V~l~~~n~--~~~~~~ 117 (553)
+.++..+++++-.+++..+|.++. |.++. ...+||..+..++.+.|+ .|.+.|+.++|+|.++...+ .++++.
T Consensus 93 ~~d~~avl~~~~nhs~~~ta~i~i---d~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~is 168 (1363)
T KOG3628|consen 93 LTDIIAVLRYRRNHSATSTAHICI---DKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLIS 168 (1363)
T ss_pred hcchHHHHHhhccCCCCCceEEEE---cCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhh
Confidence 566778888888889999999998 66555 789999999999999999 67777999999999998776 899999
Q ss_pred HHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCCchHHHHHHhhCCce-
Q 008787 118 MEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSLTAEQKEMAVQTGIK- 196 (553)
Q Consensus 118 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 196 (553)
.++|..+|.+++|+.+..+.+++...++....++++..............+. .......++......
T Consensus 169 l~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~------------s~~k~v~~w~t~~~k~ 236 (1363)
T KOG3628|consen 169 LFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPV------------SLAKAVAWWKTNDFKG 236 (1363)
T ss_pred hccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcc------------cHHHHHHhhhcccccc
Confidence 9999999999999999999999999999999999998877665543322100 001111111111111
Q ss_pred eeeHHHHHhcccccccccCCCCCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhcc---------------ccC
Q 008787 197 PYSWDEFLHLGKVNEMEILPPQPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQ---------------FED 261 (553)
Q Consensus 197 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~---------------~~~ 261 (553)
.+.+++ ...+..... ..+|-||.+++|.--+++++|. ++.+.+.+...... .-.
T Consensus 237 ~~~~~k---------~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~ 305 (1363)
T KOG3628|consen 237 NYTKDK---------IKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVF 305 (1363)
T ss_pred eeehhh---------ccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcc
Confidence 122111 111222333 7899999999999999999998 65555544333211 011
Q ss_pred CCCCCcEEEEecChHHHHHHHH-HHHHHHcCcEEEEecC----ChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHh
Q 008787 262 KMTVDDVYLSFLPLAHILDRVI-EEYFFRRGASVGYYHG----DLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEE 336 (553)
Q Consensus 262 ~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~----~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 336 (553)
..+..+.++....+....|+.+ .+.++++|.+...++. .+..+.+.+.+++++++..-...+.+.......
T Consensus 306 ~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~---- 381 (1363)
T KOG3628|consen 306 PVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQE---- 381 (1363)
T ss_pred ccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccC----
Confidence 3456677788888888888876 6668999999888775 788999999999999999877776665432221
Q ss_pred hchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCceeEEEEcCCCCCHHHHHHHHHhc----CC---
Q 008787 337 LRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRLRLVISGGAPLSTEVEEFLRVTC----CA--- 409 (553)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~----~~--- 409 (553)
.+.. .+.+++-....++++|.+.+.-..+..+..+...+.+ |.
T Consensus 382 -----------------------------~p~a-~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~ 431 (1363)
T KOG3628|consen 382 -----------------------------DPKA-TLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNV 431 (1363)
T ss_pred -----------------------------Cccc-ccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCc
Confidence 1100 0111112222336999999999888888766554433 21
Q ss_pred ---------------ceEeeeccccCCCceeeccCCCc-----------------------------cccCccCCCCCC-
Q 008787 410 ---------------FLVQGYGLTETCGPTTVCFPDEM-----------------------------CMVGTAGPVSVY- 444 (553)
Q Consensus 410 ---------------~i~~~YG~tE~g~~~~~~~~~~~-----------------------------~~~~~~G~~~~~- 444 (553)
-....=++.|.+......+.... .....+|...||
T Consensus 432 ~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~ 511 (1363)
T KOG3628|consen 432 KVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGD 511 (1363)
T ss_pred ceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccc
Confidence 12222244566555444333100 112234556666
Q ss_pred eeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhcc-------------CCccccCceEEEccCCcEEE
Q 008787 445 SELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESII-------------DGWFHTGDIGQILPNGVVKI 511 (553)
Q Consensus 445 ~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-------------~g~~~TGD~g~~~~dG~l~~ 511 (553)
+.+.++ +++....+.++++|||||.++....+|+.-+..+...|. .-|.|||-+|+++ +|.+||
T Consensus 512 ~t~~vv--~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~v 588 (1363)
T KOG3628|consen 512 ATLAVV--NPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYV 588 (1363)
T ss_pred eEEEEe--CCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEE
Confidence 333334 456667778889999999999999999987776666551 1289999999997 556666
Q ss_pred EecccCceecCCceeecchh----------HHHHHhcCcCcceEEEEec
Q 008787 512 IDRKKNLIKISQGEYVALEY----------LENVYCVAPIIEDVSISYS 550 (553)
Q Consensus 512 ~GR~~d~i~~~~G~~~~~~~----------iE~~l~~~p~V~~~~V~g~ 550 (553)
+|-.+|.+.--.|..++..+ |+-+.+..+.|.+++||-.
T Consensus 589 l~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~~ 637 (1363)
T KOG3628|consen 589 LGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFED 637 (1363)
T ss_pred EEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeeec
Confidence 66666665422355544333 4555577899999988753
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.66 E-value=1.8e-14 Score=144.76 Aligned_cols=243 Identities=16% Similarity=0.156 Sum_probs=156.0
Q ss_pred EEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEe--cChHHHHHHHHHHHHHHc-CcEEEEec-
Q 008787 223 CTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSF--LPLAHILDRVIEEYFFRR-GASVGYYH- 298 (553)
Q Consensus 223 ~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~g~~~~~~~l~~-g~~~~~~~- 298 (553)
..+..||||||.|-.+..+.................. ++..++++... .+. +.+.. +.. ...+..++
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~--g~~~g~r~a~~~~~~~-~ly~~------~~~~~~~~~~~~l 172 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPD--GLFAKHRIAFFLRADN-NLYQS------VNNRWISLDFFDL 172 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCcc--ccccCCcEEEEEccCh-hHHHH------HHhccceeeecCC
Confidence 4567899999999999999987755444333222111 34444444333 222 11111 111 11122222
Q ss_pred -CChHHHHHHhhhhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcchHHHHHHHHHH
Q 008787 299 -GDLNALRDDLMELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREASPLADLLAFRKV 377 (553)
Q Consensus 299 -~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (553)
.+.+.+++.|++++|+++.++|+.+..|++.+..... .
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l--~--------------------------------------- 211 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL--T--------------------------------------- 211 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC--C---------------------------------------
Confidence 3789999999999999999999999999875543210 0
Q ss_pred HHHhCCceeEEEEcCCCCCHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCe--eEEEeecCCC
Q 008787 378 KARLGGRLRLVISGGAPLSTEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYS--ELRLEEVPEM 455 (553)
Q Consensus 378 ~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~--~v~i~~~~~~ 455 (553)
.+++.++++|+.++++..+.+++.||+++++.||+|| |.+++.+..+. .....+.+ |..++| +++
T Consensus 212 -----~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC~~g~------lHl~ed~~~vE~~ivD-~~~ 278 (430)
T TIGR02304 212 -----IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTCRCGT------LHLNEDLVHIEKQYLD-EHK 278 (430)
T ss_pred -----CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEecCCCC------EEEccccEEEEeeEEC-CCC
Confidence 1689999999999999999999999999999999999 66655553221 11111122 222556 322
Q ss_pred CCCCCCCCCCCeEEEecCCc-cccccCChhhhhhhccCCccccCceEEEccC----Cc----E-EEEecccCceec--CC
Q 008787 456 GYSPLDDPPCGEVCVRGKTL-FSGYYKNPDLTRESIIDGWFHTGDIGQILPN----GV----V-KIIDRKKNLIKI--SQ 523 (553)
Q Consensus 456 ~~~~~~~~~~Gei~v~~~~~-~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d----G~----l-~~~GR~~d~i~~--~~ 523 (553)
.+..+|++-.. +...+ -|+|||++.+.++ |. | .+.||.+|++++ .+
T Consensus 279 ---------~~~~ViT~L~n~~~PlI-------------RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~ 336 (430)
T TIGR02304 279 ---------RFVPIITDFTRTTQPIV-------------RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRS 336 (430)
T ss_pred ---------ceEEEEecCCCccceEE-------------eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCC
Confidence 13445554211 11111 2899999988543 32 3 488999999984 34
Q ss_pred cee--ecchhHHHHH-hcCcCcceEEEEec
Q 008787 524 GEY--VALEYLENVY-CVAPIIEDVSISYS 550 (553)
Q Consensus 524 G~~--~~~~~iE~~l-~~~p~V~~~~V~g~ 550 (553)
|.. ++|..++.+| ...++|.+.-|+..
T Consensus 337 G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 337 GDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred CCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 555 4888899885 46789988877653
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.19 E-value=2e-11 Score=120.07 Aligned_cols=56 Identities=21% Similarity=0.298 Sum_probs=52.2
Q ss_pred ccCCccccCceEEE-ccCCcEEEEecccCceecCCc---eeecchhHHHHHhcCcCcceEEEEecCC
Q 008787 490 IIDGWFHTGDIGQI-LPNGVVKIIDRKKNLIKISQG---EYVALEYLENVYCVAPIIEDVSISYSSV 552 (553)
Q Consensus 490 ~~~g~~~TGD~g~~-~~dG~l~~~GR~~d~i~~~~G---~~~~~~~iE~~l~~~p~V~~~~V~g~~~ 552 (553)
+.||||+|||+|++ |+||+|+|+||.+ +| ++|+|. ||++|.+||+|.||+|+|+++
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd 265 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSL 265 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEc
Confidence 46899999999998 7999999999997 57 799999 999999999999999999876
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.12 E-value=1.2e-08 Score=100.66 Aligned_cols=237 Identities=18% Similarity=0.196 Sum_probs=141.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHH---HHHH--HHHHHHHcCc
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHI---LDRV--IEEYFFRRGA 292 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~g~~--~~~~~l~~g~ 292 (553)
..+++...+.||||||.+--+.+.+..+......+...+..........-.++...|-... .+.. ........+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 4556778899999999987777777666666655554443221111122233444443211 1111 1222333455
Q ss_pred EEEEecC--ChHHHHHHhh----hhcCcEEeechHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHhccCCcCCcc
Q 008787 293 SVGYYHG--DLNALRDDLM----ELKPTLLAGVPRVFEKIHEGIKKALEELRPLRRRIFDALYKYKLAWMNMGYKQREAS 366 (553)
Q Consensus 293 ~~~~~~~--~~~~~~~~i~----~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (553)
...+-.. +.+.++..+. ..++..+++.|.++..+++.+++......
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~---------------------------- 218 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFR---------------------------- 218 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCccc----------------------------
Confidence 5333222 5666665554 56788899999888877765544422111
Q ss_pred hHHHHHHHHHHHHHhCCceeEEEEcC------CCCCH-HHHHHHHHhcCC----ceEeeeccccCCCceeeccCCCcccc
Q 008787 367 PLADLLAFRKVKARLGGRLRLVISGG------APLST-EVEEFLRVTCCA----FLVQGYGLTETCGPTTVCFPDEMCMV 435 (553)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~lr~i~~gG------~~l~~-~~~~~~~~~~~~----~i~~~YG~tE~g~~~~~~~~~~~~~~ 435 (553)
+.+..+.+..|| +.+++ +..+.+++.||+ .+++.||+||.....+.+....
T Consensus 219 --------------L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~---- 280 (365)
T PF04443_consen 219 --------------LPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH---- 280 (365)
T ss_pred --------------CCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc----
Confidence 002345555565 44654 567778888888 5999999999877666552211
Q ss_pred CccCCCCCCeeEEEeecCCCCCCCCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccC--------C
Q 008787 436 GTAGPVSVYSELRLEEVPEMGYSPLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN--------G 507 (553)
Q Consensus 436 ~~~G~~~~~~~v~i~~~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d--------G 507 (553)
.++|-. +.+.| + .+..+++.|+.|-|.+-++... .| -+..-|.|+|.+..+ .
T Consensus 281 ----~~~p~w-V~iRD-p-~tl~~~~~Ge~Gli~vidl~~~-s~------------p~~IlTeDlGvl~~~~~c~cr~g~ 340 (365)
T PF04443_consen 281 ----FHVPPW-VIIRD-P-ETLEPLPPGETGLIQVIDLANT-SY------------PGFILTEDLGVLHGDDDCGCRKGK 340 (365)
T ss_pred ----ccCCCe-EEEEC-C-CCCcCCCCCCeeEEEEEccccc-CC------------CcEEEEcceeeecCCCCCCCccCC
Confidence 122222 55556 4 3467888899999998776433 12 233679999988654 2
Q ss_pred cEEEEecccCcee
Q 008787 508 VVKIIDRKKNLIK 520 (553)
Q Consensus 508 ~l~~~GR~~d~i~ 520 (553)
++.++||.+..=.
T Consensus 341 ~f~vlGR~~~ae~ 353 (365)
T PF04443_consen 341 YFEVLGRADGAEI 353 (365)
T ss_pred EEEEEeCCCCCcc
Confidence 7999999886543
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.27 E-value=4.8e-06 Score=87.10 Aligned_cols=145 Identities=19% Similarity=0.238 Sum_probs=81.3
Q ss_pred CceeEEEEcCCCCCHHHHHHHHHhcCC--ceEeeeccccCCCceeeccCCCccccCccCCCCCCee-EEEeecCCCC---
Q 008787 383 GRLRLVISGGAPLSTEVEEFLRVTCCA--FLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSE-LRLEEVPEMG--- 456 (553)
Q Consensus 383 ~~lr~i~~gG~~l~~~~~~~~~~~~~~--~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~-v~i~~~~~~~--- 456 (553)
++|+++.+-+..-.......+++.++- .+...|++||+ .++....++. ..+.+.++.. ...++.++..
T Consensus 267 P~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~~~-----~~~~l~~~~~ffEFip~~~~~~~~ 340 (528)
T PF03321_consen 267 PNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDPED-----PGYVLAPDSGFFEFIPVDEDEQNP 340 (528)
T ss_dssp TT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-CCC-------EEE-TTSSEEEEEE-STT----
T ss_pred CCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCCCC-----CceEeecCCeEEEEEeccCCcccc
Confidence 689977776655555667777777753 35579999994 3333322211 1122222222 2233322211
Q ss_pred ---CC-----CCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEcc--CC--cEEEEecccCceecCCc
Q 008787 457 ---YS-----PLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILP--NG--VVKIIDRKKNLIKISQG 524 (553)
Q Consensus 457 ---~~-----~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~--dG--~l~~~GR~~d~i~~~~G 524 (553)
.. .+..|+..||+|+.. .|.|+ |+.||+.++.. ++ .+.|+||.+.++.+ .|
T Consensus 341 ~~~~~~l~~~ele~G~~YelviTt~---~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l-~g 403 (528)
T PF03321_consen 341 SEQPKTLLLHELEVGEEYELVITTN---SGLYR-------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL-FG 403 (528)
T ss_dssp ---SSSEEGGG--TT-EEEEEEEST---TS-SS-------------EEECEEEEEEEEETTEEEEEEEEETTEEE-S-SS
T ss_pred cCCCceecHHHhcCCCeEEEEEecc---cceee-------------eecCCEEEEeeccCCCcEEEEeccCCceeec-ce
Confidence 11 122456677888764 34443 89999999852 45 79999999999998 79
Q ss_pred eeecchhHHHHHhcC-----cCcceEEEEec
Q 008787 525 EYVALEYLENVYCVA-----PIIEDVSISYS 550 (553)
Q Consensus 525 ~~~~~~~iE~~l~~~-----p~V~~~~V~g~ 550 (553)
++++..+|+++|.+. -.+.+..+...
T Consensus 404 Ekl~e~~v~~av~~~~~~~~~~~~~f~~~~~ 434 (528)
T PF03321_consen 404 EKLSEEQVQEAVARALQETGLELRDFTVAPD 434 (528)
T ss_dssp --EEHHHHHHHHHHHHHCTT-EEEEEEEEEE
T ss_pred eecCHHHHHHHHHHHHHhcCCceeeEEEEee
Confidence 999999999999754 34556555544
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.94 E-value=0.0013 Score=68.69 Aligned_cols=141 Identities=14% Similarity=0.057 Sum_probs=83.5
Q ss_pred HHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCceE-eeeccccCCCceeeccCCCccccCccCCCCCCeeE-EEeecCCC
Q 008787 379 ARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAFLV-QGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSEL-RLEEVPEM 455 (553)
Q Consensus 379 ~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v-~i~~~~~~ 455 (553)
.++=+++++|.+-..--.......++..+ |+++. ..|++||+ .+ ..+...........+...|+... ..++.+++
T Consensus 289 ~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~-~~-ginl~p~~~p~~~sy~L~p~~~yFEFip~~~~ 366 (606)
T PLN02247 289 KRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSEC-YF-GINLKPLSDPSDVSYTLLPNMAYFEFLPVDKN 366 (606)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccce-EE-EeccCcCCCccCCceeecCCcEEEEEeecCCC
Confidence 34448999998865555666667777666 55544 49999994 22 32221111110112233343322 12221111
Q ss_pred C------------------------CC---CCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEc----
Q 008787 456 G------------------------YS---PLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQIL---- 504 (553)
Q Consensus 456 ~------------------------~~---~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~---- 504 (553)
. .+ .+..|+.-||+|+.. .|.|+ ||.||+.++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~---~GLYR-------------YrlGDvv~V~GF~n 430 (606)
T PLN02247 367 NGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTF---TGLYR-------------YRVGDILMVTGFYN 430 (606)
T ss_pred cccccccccccccccccccccccCceecHHHccCCCeEEEEEEec---CceEE-------------EecCCEEEEeeecC
Confidence 1 00 122456677877652 33332 8999998874
Q ss_pred cCCcEEEEecccCceecCCceeecchhHHHHHhc
Q 008787 505 PNGVVKIIDRKKNLIKISQGEYVALEYLENVYCV 538 (553)
Q Consensus 505 ~dG~l~~~GR~~d~i~~~~G~~~~~~~iE~~l~~ 538 (553)
..-.|.|++|.+.+..+ .|+|.+-.++-.++.+
T Consensus 431 ~~P~~~Fv~R~~~vlsi-~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 431 NAPQFRFVQRRNVVLSI-DTDKTNEEDLLKAVTQ 463 (606)
T ss_pred CCceEEEEecCCceeec-ccccCCHHHHHHHHHH
Confidence 23469999999999998 7999999999888854
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.88 E-value=0.00024 Score=74.79 Aligned_cols=136 Identities=15% Similarity=0.142 Sum_probs=77.7
Q ss_pred HhCCc---eeEEEEcCCCCCHHHHHHHHHhc-CC-ceEeeeccccCCCceeeccCCCccccCccC-CCCC-CeeEEEeec
Q 008787 380 RLGGR---LRLVISGGAPLSTEVEEFLRVTC-CA-FLVQGYGLTETCGPTTVCFPDEMCMVGTAG-PVSV-YSELRLEEV 452 (553)
Q Consensus 380 ~~~~~---lr~i~~gG~~l~~~~~~~~~~~~-~~-~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G-~~~~-~~~v~i~~~ 452 (553)
++=++ +..+.+||.. .-...++..+ +. .+...|++||+ .++....+.. .+...+ ..++ +.-...++.
T Consensus 299 ~lWPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg-~~gi~~~~~~--~p~~~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 299 KIWPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSES-YFGINLNPMC--KPSEVSYTIMPNMAYFEFLPH 372 (597)
T ss_pred HhCCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccce-EEEeecCCCC--CCCCcceEecCCcEEEEeeec
Confidence 33367 5555566644 4555666665 33 36779999994 3333221110 001111 1112 222233321
Q ss_pred CCCC--------CC---CCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEccC----CcEEEEecccC
Q 008787 453 PEMG--------YS---PLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQILPN----GVVKIIDRKKN 517 (553)
Q Consensus 453 ~~~~--------~~---~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~~d----G~l~~~GR~~d 517 (553)
++.+ .. .+..|+.-|++|+.. .|.|+ |+.||+.++..- =.|.|+||.+.
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~---~GLyR-------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~ 436 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITTY---AGLYR-------------YRVGDILRVTGFHNSAPQFKFIRRKNV 436 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEcc---cceeE-------------eecCCEEEEeeccCCCcEEEEEccCCc
Confidence 1111 11 122345667777652 33332 899999998532 36899999999
Q ss_pred ceecCCceeecchhHHHHHhc
Q 008787 518 LIKISQGEYVALEYLENVYCV 538 (553)
Q Consensus 518 ~i~~~~G~~~~~~~iE~~l~~ 538 (553)
++.+ .|+++...+++.+|.+
T Consensus 437 ~ls~-~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 437 LLSI-ESDKTDEADLQKAVEN 456 (597)
T ss_pred ceec-ccccCCHHHHHHHHHH
Confidence 9997 7999999999998865
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.82 E-value=0.004 Score=65.07 Aligned_cols=141 Identities=15% Similarity=0.017 Sum_probs=82.8
Q ss_pred HHhCCceeEEEEcCCCCCHHHHHHHHHhc-CCc-eEeeeccccCCCceeeccCCCccccCccCCCCCCeeEE-EeecCC-
Q 008787 379 ARLGGRLRLVISGGAPLSTEVEEFLRVTC-CAF-LVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELR-LEEVPE- 454 (553)
Q Consensus 379 ~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~-i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~-i~~~~~- 454 (553)
.++=+++++|.+-...-.......++..+ |++ +-..|++||+ .+...-.+.. ......+...|+...- .+++++
T Consensus 300 ~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~-~~ginl~P~~-~p~~~sy~L~p~~~yFEFip~~~~ 377 (612)
T PLN02620 300 TRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSEC-YFGVNLNPLC-KPSEVSYTLIPTMAYFEFLPVHRN 377 (612)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccce-EEEeccCCCC-CcccceeeecCCcEEEEEeeccCc
Confidence 44448999988865555555666666665 565 4559999994 3322211111 1101122333333221 221111
Q ss_pred CC------------------CC---CCCCCCCCeEEEecCCccccccCChhhhhhhccCCccccCceEEEc----cCCcE
Q 008787 455 MG------------------YS---PLDDPPCGEVCVRGKTLFSGYYKNPDLTRESIIDGWFHTGDIGQIL----PNGVV 509 (553)
Q Consensus 455 ~~------------------~~---~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~g~~~----~dG~l 509 (553)
++ .+ .+..|+.-||+|+.. .|.|+ |+.||+.++. ..-.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~---~GLyR-------------YrlGDvv~V~Gf~n~~P~~ 441 (612)
T PLN02620 378 NGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTY---AGLYR-------------YRVGDVLRVAGFKNKAPQF 441 (612)
T ss_pred ccccccccccccccccccCccccHHHccCCCeEEEEEEec---CceEE-------------EecCCEEEEeeecCCCceE
Confidence 00 01 123456677887652 33332 8999998874 23469
Q ss_pred EEEecccCceecCCceeecchhHHHHHhc
Q 008787 510 KIIDRKKNLIKISQGEYVALEYLENVYCV 538 (553)
Q Consensus 510 ~~~GR~~d~i~~~~G~~~~~~~iE~~l~~ 538 (553)
.|++|.+.+..+ .|+|.+-.++-.++.+
T Consensus 442 ~Fv~R~~~~lsi-~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 442 SFICRKNVVLSI-DSDKTDEVELQNAVKN 469 (612)
T ss_pred EEEeecCceeec-ccccCCHHHHHHHHHH
Confidence 999999999998 8999999998888753
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=93.69 E-value=0.36 Score=48.56 Aligned_cols=97 Identities=10% Similarity=0.004 Sum_probs=77.0
Q ss_pred CCCCCc--eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 008787 69 GKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVNFIL 144 (553)
Q Consensus 69 ~~~~~~--~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 144 (553)
|.+|.. .-+|+.|....+..+|+.|...|..+||+|.+...-+. .-+-..+|+.++|+.++|+.+.. -+....++
T Consensus 100 GTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~ 178 (438)
T COG1541 100 GTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELM 178 (438)
T ss_pred CCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHH
Confidence 344433 36899999999999999999999999999998776221 12668899999999999998843 45567889
Q ss_pred hhcCceEEEEcchhhhhhhccc
Q 008787 145 DHAEIDFVFVQDKKVKELLSPD 166 (553)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~~~~ 166 (553)
++.++.+|.+.+..+-.+.+..
T Consensus 179 ~df~~tvI~~tps~~l~lae~~ 200 (438)
T COG1541 179 KDFKPTVIAATPSYLLYLAEEA 200 (438)
T ss_pred HhcCCcEEEEChHHHHHHHHHH
Confidence 9999999999998766554444
No 138
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.04 E-value=7.9 Score=40.06 Aligned_cols=91 Identities=12% Similarity=0.030 Sum_probs=67.2
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeCCCCCChhHHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPLYDTLGPGAVNFI 143 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 143 (553)
.|.+|..+ .+|..++...+...+..+...|+++||++.+..+.+.. ....++++..+|+.+++... ......+
T Consensus 95 SGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~ 171 (445)
T TIGR03335 95 SGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRI 171 (445)
T ss_pred CCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHH
Confidence 45556554 57888998888888888888899999999998876543 23446788899998876643 2345678
Q ss_pred HhhcCceEEEEcchhhhh
Q 008787 144 LDHAEIDFVFVQDKKVKE 161 (553)
Q Consensus 144 l~~~~~~~i~~~~~~~~~ 161 (553)
++..++.+++......-.
T Consensus 172 i~~~~~t~l~~~ps~ll~ 189 (445)
T TIGR03335 172 IESYRPTGIVASVFKLLR 189 (445)
T ss_pred HHHhCCCEEEECHHHHHH
Confidence 899999998877665433
No 139
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=85.82 E-value=7.1 Score=40.05 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=70.4
Q ss_pred CCCCCCceE--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHHHH
Q 008787 68 DGKFGPYVW--KTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVNFI 143 (553)
Q Consensus 68 d~~~~~~~~--~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 143 (553)
.|.+|..+. +|..++......++..+...|+++||++....+... ......+++...|+.+++++... .+.+-..
T Consensus 84 SGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 162 (422)
T TIGR02155 84 SGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQL 162 (422)
T ss_pred CCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHH
Confidence 566776654 466666666666777777789999999887665443 22334677889999999887654 5778899
Q ss_pred HhhcCceEEEEcchhhhhhhc
Q 008787 144 LDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 144 l~~~~~~~i~~~~~~~~~~~~ 164 (553)
++..++.+++..+.....+.+
T Consensus 163 i~~~~~t~l~~~Ps~l~~L~~ 183 (422)
T TIGR02155 163 IQDFKPDIIMVTPSYMLNLLE 183 (422)
T ss_pred HHHHCCCEEEEcHHHHHHHHH
Confidence 999999999999887665543
No 140
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=80.48 E-value=32 Score=36.11 Aligned_cols=119 Identities=9% Similarity=-0.029 Sum_probs=79.0
Q ss_pred CCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEeeCCC
Q 008787 57 GNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYD 133 (553)
Q Consensus 57 ~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 133 (553)
+.++++.. ..+.+|..+ .+|+..+...+..... ..+++++|++....+....+ +...++++..|+..+..+.
T Consensus 167 ~~~~~i~~--TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 167 NDAAAMLY--TSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred cceEEEEE--CCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 44555433 145566554 5688887766655544 44789999998887755333 3345568889999887766
Q ss_pred CCChhHHHHHHhhcCceEEEEcchhhhhhhccccc---cccCccEEEEecC
Q 008787 134 TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR---SAQRLRVMVCFTS 181 (553)
Q Consensus 134 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 181 (553)
. +.+.+...+++.++..+++.+.....+...... ....++.++.-++
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge 291 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGA 291 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCc
Confidence 4 888999999999999999988877666543322 2234455444443
No 141
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.14 E-value=28 Score=36.45 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=73.5
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 131 (553)
++.++++.. ..+.+|..+ .+|+..+...+..+.. ..++++++++...++-.-. +...+++++..|+.+++.
T Consensus 165 ~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 239 (513)
T PRK07656 165 PDDVADILF--TSGTTGRPKGAMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL 239 (513)
T ss_pred CCceEEEEe--CCCCCCCCCEEEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec
Confidence 345555443 145555544 6788887765554443 3378899999888775433 345678999999988775
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhcc
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
+..+++.+...+++.++.+++..+.....+...
T Consensus 240 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 272 (513)
T PRK07656 240 -PVFDPDEVFRLIETERITVLPGPPTMYNSLLQH 272 (513)
T ss_pred -CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC
Confidence 556788899999999999999888877666543
No 142
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=75.91 E-value=26 Score=35.79 Aligned_cols=117 Identities=9% Similarity=-0.014 Sum_probs=78.5
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch-hHHHHHHHHHhcCCEEeeCC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP-QWVEAMEACNALSLICVPLY 132 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~ 132 (553)
++.++++.. ..+.+|..+ .+|+..+...+..+...+ +++++|++....+-.. ..+..+++++..|+..+..+
T Consensus 110 ~~~~~~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMF--TSGTTGKPKAVPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEe--CCCCCCCCcEEEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 345555433 155666554 778888887766665543 7899999888776542 22345788899999988775
Q ss_pred CCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecC
Q 008787 133 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS 181 (553)
Q Consensus 133 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (553)
+. +.+...+++.++..+...+.....+....... ..++.++..+.
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-~~l~~~~~~G~ 229 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-ENLRKILLGGS 229 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC-CceEEEEECCC
Confidence 43 37888899999999998888776665543322 45555555444
No 143
>PRK08315 AMP-binding domain protein; Validated
Probab=73.91 E-value=34 Score=36.43 Aligned_cols=102 Identities=14% Similarity=-0.041 Sum_probs=70.6
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc--hhHHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l 131 (553)
++.++++.. ..+.+|..+ .+|+..+...+..+.. ..+++++|++....+-. ..++..+++++..|+..+..
T Consensus 198 ~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 198 PDDPINIQY--TSGTTGFPKGATLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCcEEEEE--cCCCCCCcceEEeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 444544432 156666654 5677777655554433 34889999988877753 44456678899999988756
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
....++..+...+++.++.+++..+.....+
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~ 303 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPTMFIAE 303 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchHHHHHH
Confidence 6667788889999999999998877755443
No 144
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=72.60 E-value=62 Score=34.37 Aligned_cols=122 Identities=11% Similarity=-0.025 Sum_probs=79.1
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc--hhHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~ 130 (553)
.++.+|++.. -.|.+|..| .+|+..+...+.... ...++.++|++...+|-. ..+...++..+..|+.++.
T Consensus 181 ~~~d~a~i~~--TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILF--TSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEE--CCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 4566666553 145566554 678887766544333 334788899888877643 2233345677888988877
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcccc---ccccCccEEEEecC
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC---RSAQRLRVMVCFTS 181 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 181 (553)
......++.+...+++.++..+...+.....+.+... .....++.++.-+.
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~ 309 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGD 309 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCc
Confidence 6556778899999999999999988887666544321 12344555555444
No 145
>PRK12583 acyl-CoA synthetase; Provisional
Probab=70.48 E-value=47 Score=35.29 Aligned_cols=103 Identities=11% Similarity=-0.006 Sum_probs=70.2
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCC--chhHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGAN--CPQWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~ 130 (553)
.++.++.+.. ..+.+|..+ .+|+..+...+..+... .+++++|++....|- ....+..+++++..|+.++.
T Consensus 199 ~~~~~a~i~~--TSGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 199 DRDDPINIQY--TSGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred CCCCcEEEEE--CCCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 3455554432 155666554 67788776555544433 378899998877664 24456667888889998875
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
.....++..+...+++.++..++..+.....+
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 305 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTMFIAE 305 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHHHHHH
Confidence 55556788888999999999998887765444
No 146
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=70.19 E-value=78 Score=33.16 Aligned_cols=93 Identities=13% Similarity=-0.005 Sum_probs=68.6
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYDTLGPGAVNFIL 144 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 144 (553)
.+.+|..+ .+|+..+...+..+... .+++++|++...+|-+.. .+..+++++..|+..+.. +...++.+...+
T Consensus 170 SGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i 245 (515)
T TIGR03098 170 SGSTGRPKGVVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKAL 245 (515)
T ss_pred CCCCCCCceEEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHH
Confidence 45555443 56888887666655543 367899999888876543 344678889999998866 456788899999
Q ss_pred hhcCceEEEEcchhhhhhhc
Q 008787 145 DHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~~ 164 (553)
++.++.++...+.....+..
T Consensus 246 ~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 246 EKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHcCCceEecChHHHHHHHh
Confidence 99999999999887766654
No 147
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=69.76 E-value=98 Score=31.11 Aligned_cols=123 Identities=11% Similarity=0.022 Sum_probs=83.5
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeC
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPL 131 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l 131 (553)
.++.++++.. ..+.+|..+ .+|+..+...+..+.. ..+++++|++....+-... .+..+++.+..|+..+..
T Consensus 118 ~~~~~~~i~~--TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~ 192 (408)
T TIGR01733 118 GPDDLAYVIY--TSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVP 192 (408)
T ss_pred CCCCcEEEEE--cCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEc
Confidence 3556666543 144455443 5677777766665554 3367889999887776644 345678888899888877
Q ss_pred CCCCC--hhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCC
Q 008787 132 YDTLG--PGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSL 182 (553)
Q Consensus 132 ~~~~~--~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (553)
+.... +..+..+++..++..+++.+.....+.+........++.++.-+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~~ 245 (408)
T TIGR01733 193 PEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGEA 245 (408)
T ss_pred ChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCcc
Confidence 66544 6788999999999999999988877765543344556666555543
No 148
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=69.11 E-value=87 Score=32.49 Aligned_cols=103 Identities=11% Similarity=0.001 Sum_probs=70.3
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 132 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~ 132 (553)
++.++++.. ..+.+|..+ .+|+..+...+... ....+++++|++...+|-.-. .+..+++.+..|+.++..+
T Consensus 140 ~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 214 (483)
T PRK03640 140 LDEVATIMY--TSGTTGKPKGVIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE 214 (483)
T ss_pred CCCeEEEEe--CCCcCCCCcEEEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC
Confidence 445554433 145566544 67777765543332 233588999999998875322 2334677778899887665
Q ss_pred CCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 133 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 133 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
..++.++...++..++.++...+.....+..
T Consensus 215 -~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 245 (483)
T PRK03640 215 -KFDAEKINKLLQTGGVTIISVVSTMLQRLLE 245 (483)
T ss_pred -CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 5678899999999999999998887766654
No 149
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=68.49 E-value=58 Score=34.86 Aligned_cols=122 Identities=8% Similarity=-0.064 Sum_probs=79.0
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 131 (553)
++.++++.. ..+.+|..+ .+|+..+...+. ......+++++|++....+.... ....+++.+..|+..+..
T Consensus 204 ~~~~a~i~~--TSGTTG~PKgV~~s~~~l~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 204 REDGAILHY--TSGSTGKPKGVLHVHNAMLQHYQ---TGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred CCCCEEEEe--CCCCCCCCCEEEEecHHHHHHHH---HHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 455555543 156666655 567776654433 33334578899987666554432 245678888999998877
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhcccc-----ccccCccEEEEecCC
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-----RSAQRLRVMVCFTSL 182 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 182 (553)
....+++.+...+++.++..++..+.....+.+... .....++.++..+..
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~ 334 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEP 334 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccC
Confidence 777788999999999999999998887766644321 122345555555443
No 150
>PRK07638 acyl-CoA synthetase; Validated
Probab=65.80 E-value=1.2e+02 Score=31.52 Aligned_cols=94 Identities=11% Similarity=0.036 Sum_probs=67.1
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYDTLGPGAVNFIL 144 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 144 (553)
.|.+|..+ .+|...+...+... ....+++++|++....+-... ++...+..+..|+..+.. +..++.++...+
T Consensus 152 SGtTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i 227 (487)
T PRK07638 152 SGSTGKPKAFLRAQQSWLHSFDCN---VHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKL 227 (487)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHH---HHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHH
Confidence 56666655 55666665444433 334478899998877665433 345667778899988765 567788899999
Q ss_pred hhcCceEEEEcchhhhhhhcc
Q 008787 145 DHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~~~ 165 (553)
++.++.++...+.....+.+.
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhC
Confidence 999999999998887777554
No 151
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=65.01 E-value=47 Score=33.67 Aligned_cols=90 Identities=21% Similarity=0.095 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++. -..-.+|+..+...+..+...+.. .++..++++....+-.. ..+...+.++..|+..+.+
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~--~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRK--LGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHH--TTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHH--hCCCccccccccCCccc-eeeeeeccccccccccccc
Confidence 456677765 234678899999888888877753 26788888888777753 3344566778889998887
Q ss_pred cC--ChHHHHHHhhhhcCcEEee
Q 008787 298 HG--DLNALRDDLMELKPTLLAG 318 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~ 318 (553)
+. ..+.+...+++.++++++.
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccceeEEEE
Confidence 65 7889999999999999996
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=64.84 E-value=63 Score=33.89 Aligned_cols=104 Identities=9% Similarity=-0.222 Sum_probs=68.8
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 132 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~ 132 (553)
++.++++.. ..+.+|..| .+|...+...+... ....++.++|++...+|-+-. ....+++++..|+.++..+
T Consensus 118 ~~d~a~i~y--TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILF--SSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEe--CCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 355555543 145566555 56776655433222 234478899988766654322 1235678889999988776
Q ss_pred CCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 133 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 133 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
....++.+-..+++.++.++...+.....+.+
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 55567888999999999999988887766544
No 153
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=64.36 E-value=38 Score=31.26 Aligned_cols=54 Identities=24% Similarity=0.218 Sum_probs=42.9
Q ss_pred HHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCc
Q 008787 94 RASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEI 149 (553)
Q Consensus 94 ~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 149 (553)
...|+.++|++. .+|-.- -+...+++++..|++.+.+ ++.+++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556899999999 877553 3345789999999998887 68899888888877664
No 154
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=64.28 E-value=23 Score=25.96 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=53.0
Q ss_pred EeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceE
Q 008787 76 WKTYKEVYEEVLQIVS---ALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDF 151 (553)
Q Consensus 76 ~~Ty~el~~~v~~la~---~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 151 (553)
..||+||.+.-..++. .|.+..+...|.++|+-=++..+. -++.++...+.+++...++..++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchh
Confidence 4799999888776654 477778999999999988776643 4667888889999999999999876
No 155
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=64.22 E-value=69 Score=33.96 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=74.7
Q ss_pred eEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCc
Q 008787 237 GVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPT 314 (553)
Q Consensus 237 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t 314 (553)
+..+|+..+...+..+...+...+.+...+|++....|-..-+. ...+.++..|+.+.-... +..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78999999999998888887554445778999999998875433 345566777877665443 899999999999999
Q ss_pred EEeechHHHHHHHHHHHH
Q 008787 315 LLAGVPRVFEKIHEGIKK 332 (553)
Q Consensus 315 ~l~~~p~~~~~l~~~~~~ 332 (553)
+++.....+..+.+....
T Consensus 122 iif~d~~~~~~i~~~~~~ 139 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEATSK 139 (537)
T ss_pred EEEEcCchHHHHHHHHhh
Confidence 999999999888665433
No 156
>PRK07788 acyl-CoA synthetase; Validated
Probab=62.92 E-value=80 Score=33.56 Aligned_cols=111 Identities=12% Similarity=0.027 Sum_probs=71.8
Q ss_pred CCCCCCceE--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEeeCCCCCChhHHHHHH
Q 008787 68 DGKFGPYVW--KTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYDTLGPGAVNFIL 144 (553)
Q Consensus 68 d~~~~~~~~--~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 144 (553)
.|.+|..+- +|...+... ++......++.++|++....|-.-.+ +..+++++..|+.++.. ...+++.+...+
T Consensus 216 SGTTG~PKgv~~s~~~~~~~---~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i 291 (549)
T PRK07788 216 SGTTGTPKGAPRPEPSPLAP---LAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDI 291 (549)
T ss_pred CCCCCCCCEEeccCccHHHH---HHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHH
Confidence 566776664 455444433 33344455788999887776653332 23456677889887766 566788899999
Q ss_pred hhcCceEEEEcchhhhhhhccccc-----cccCccEEEEecCC
Q 008787 145 DHAEIDFVFVQDKKVKELLSPDCR-----SAQRLRVMVCFTSL 182 (553)
Q Consensus 145 ~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 182 (553)
++.++..++..+.....+.+.... ....++.++.-++.
T Consensus 292 ~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~ 334 (549)
T PRK07788 292 AKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSA 334 (549)
T ss_pred HHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCC
Confidence 999999999988877766543321 23455555555544
No 157
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=61.98 E-value=1.3e+02 Score=32.05 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=71.1
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~ 130 (553)
.++.+|++.. ..+.+|..+ .+|+..+...+... ....++++++++....+-+- .++..+++.+..|+.++.
T Consensus 195 ~~~~~a~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~ 269 (547)
T PRK13295 195 GPDDVTQLIY--TSGTTGEPKGVMHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVL 269 (547)
T ss_pred CCcceeEEEe--CCCCCCCCCEEEeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEe
Confidence 3455655543 156666655 55776665554443 34457889999888777653 245567888899998776
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
. +....+.+...+++.++..++........+..
T Consensus 270 ~-~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~ 302 (547)
T PRK13295 270 Q-DIWDPARAAELIRTEGVTFTMASTPFLTDLTR 302 (547)
T ss_pred C-CCCCHHHHHHHHHHcCCcEEEecHHHHHHHHh
Confidence 5 45678889999999999998887776655543
No 158
>PRK05852 acyl-CoA synthetase; Validated
Probab=61.22 E-value=1.8e+02 Score=30.75 Aligned_cols=95 Identities=12% Similarity=-0.072 Sum_probs=65.5
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEeeC-CCCCChhHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVPL-YDTLGPGAVNF 142 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~ 142 (553)
.+.+|..+ .+|+..+...+..+... .+++++|++....|-.. .++..+++++..|...+.. ....++..+-.
T Consensus 185 SGTTG~PKgv~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 261 (534)
T PRK05852 185 GGTTGLPKMVPWTHANIASSVRAIITG---YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWD 261 (534)
T ss_pred CCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHH
Confidence 56666665 45777776666555543 36889998887776543 3445678888888775542 23456778888
Q ss_pred HHhhcCceEEEEcchhhhhhhcc
Q 008787 143 ILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 143 ~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
.++..++..++..+.....+...
T Consensus 262 ~i~~~~~t~~~~~P~~~~~l~~~ 284 (534)
T PRK05852 262 DIKAVGATWYTAVPTIHQILLER 284 (534)
T ss_pred HHHHcCCcEEEcChHHHHHHHhh
Confidence 89999999999888877666543
No 159
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=61.22 E-value=65 Score=34.15 Aligned_cols=106 Identities=11% Similarity=-0.110 Sum_probs=67.7
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~-~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~ 130 (553)
.++.++++.. ..+.+|..+ .+|...+... ..+..+. ..++.++|++....|-.-.+ ....++++..|+..+.
T Consensus 174 ~~~~~~~i~~--TSGTTG~PK~v~~s~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~ 249 (539)
T PRK07008 174 DENQASSLCY--TSGTTGNPKGALYSHRSTVLH--AYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVL 249 (539)
T ss_pred CcccceEEEE--CCCCCCCCcEEEEecHHHHHH--HHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEE
Confidence 3444544332 156666665 4454444322 2222332 34788999988777643322 2334777889999887
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
..+...++.+..++++.++..+...+.....+.+
T Consensus 250 ~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~ 283 (539)
T PRK07008 250 PGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLN 283 (539)
T ss_pred ecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHh
Confidence 7777788899999999999999888776655544
No 160
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=61.10 E-value=86 Score=33.47 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=70.9
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeC
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPL 131 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l 131 (553)
.++.++++.. ..|.+|..| .+|...+...+.... ...++.++|++....|-.-. .+...++.+..|+..+..
T Consensus 170 ~~~~~a~i~~--TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~ 244 (563)
T PLN02860 170 APDDAVLICF--TSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL 244 (563)
T ss_pred CCCCeEEEEe--cCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec
Confidence 3566665543 156677666 556766655444332 23478899988887774332 234567788889887765
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
+...+..+...+++.++.++...+.....+.+
T Consensus 245 -~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 245 -PKFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred -CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 55788889999999999999998887666543
No 161
>PRK08308 acyl-CoA synthetase; Validated
Probab=60.60 E-value=2e+02 Score=29.19 Aligned_cols=105 Identities=12% Similarity=-0.011 Sum_probs=72.7
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~ 130 (553)
.++.++++.. ..+.+|..| .+|+..+...+..+... .++..+|++...+|-.- .++..+++++..|+.++.
T Consensus 99 ~~~~~~~i~~--TSGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQY--SSGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEE--CCCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 3455665543 145566554 67888887766555543 35678888877776553 345567888999998877
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcc
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
.+ ..++..+...+++.++.+++..+.....+.+.
T Consensus 174 ~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 207 (414)
T PRK08308 174 IT-NKNPKFALNILRNTPQHILYAVPLMLHILGRL 207 (414)
T ss_pred cC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhc
Confidence 64 45677888889999999998888777666443
No 162
>PLN03052 acetate--CoA ligase; Provisional
Probab=60.36 E-value=81 Score=35.08 Aligned_cols=103 Identities=10% Similarity=-0.199 Sum_probs=67.0
Q ss_pred CCCceeeecccCCCCCCceEe--eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCCC
Q 008787 57 GNRMLGWRPFVDGKFGPYVWK--TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYD 133 (553)
Q Consensus 57 ~~~al~~~~~~d~~~~~~~~~--Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 133 (553)
+.++++.. ..|.+|..|-+ |...+.. .+.......+++++|++....+-+.. ....+++.+..|+..+..+.
T Consensus 356 d~~a~Ily--TSGTTG~PKgVv~sh~~~l~---~~~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g 430 (728)
T PLN03052 356 EAFTNILF--SSGTTGEPKAIPWTQLTPLR---AAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNG 430 (728)
T ss_pred CCcEEEEe--cCCCCCCCceEEECchHHHH---HHHHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCC
Confidence 55554443 25667766644 4443322 22223334688999987766554433 23346688999999988765
Q ss_pred CCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 134 TLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 134 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
......+-.++++.++.++.+.+.....+.+
T Consensus 431 ~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~ 461 (728)
T PLN03052 431 SPLGRGFAKFVQDAKVTMLGTVPSIVKTWKN 461 (728)
T ss_pred CCCCChHHHHHHHHCCCEEEECHHHHHHHHh
Confidence 4445678899999999999998887766644
No 163
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=59.81 E-value=98 Score=33.85 Aligned_cols=123 Identities=11% Similarity=-0.060 Sum_probs=74.5
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 133 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~ 133 (553)
++.++++.. ..|.+|..| .+|...+... .+...-...+++++|++....+.+......+++.+..|+..+..+.
T Consensus 262 ~~~~a~ily--TSGTTG~PKgV~~sh~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~ 337 (655)
T PRK03584 262 FDHPLWILY--SSGTTGLPKCIVHGHGGILLE--HLKELGLHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDG 337 (655)
T ss_pred CCCcEEEEe--cCCCCCCCceEEECccHHHHH--HHHHHHHhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCC
Confidence 355555443 156666665 4455443221 1111112347889998877766665444456788999999887653
Q ss_pred ---CCChhHHHHHHhhcCceEEEEcchhhhhhhccc-----cccccCccEEEEecCC
Q 008787 134 ---TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD-----CRSAQRLRVMVCFTSL 182 (553)
Q Consensus 134 ---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 182 (553)
...++.+-.++++.++..+.+.+.....+.+.. ......++.++.-++.
T Consensus 338 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~ 394 (655)
T PRK03584 338 SPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSP 394 (655)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCC
Confidence 235778889999999999988877666554321 1223455656555544
No 164
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=57.59 E-value=1.3e+02 Score=33.40 Aligned_cols=122 Identities=14% Similarity=-0.032 Sum_probs=75.7
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc--hhHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~ 130 (553)
.++.+|++.. ..|.+|..+ .+|+..+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+.++.
T Consensus 363 ~~~d~a~i~~--TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILF--TSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 3455555443 156666554 6788777666555443 33788999988877752 3344567888899999887
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccc-cccccCccEEEEecC
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD-CRSAQRLRVMVCFTS 181 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 181 (553)
.+.......+...+.+.++..++..+.....+.... ......++.++.-+.
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~ 489 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAE 489 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCc
Confidence 665445566677788899998887766554433221 112234555544443
No 165
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=55.96 E-value=1.5e+02 Score=26.56 Aligned_cols=57 Identities=14% Similarity=0.121 Sum_probs=38.5
Q ss_pred EEEEecCh--HHHHHHHHHHHH-HHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHH
Q 008787 268 VYLSFLPL--AHILDRVIEEYF-FRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFE 324 (553)
Q Consensus 268 ~~~~~~p~--~~~~g~~~~~~~-l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~ 324 (553)
+++...+. .|..|..+.... -..|-.++.... .++++.+.+++.+|+++..+-....
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~ 147 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTT 147 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcccccc
Confidence 34444444 677887664444 445777776654 7899999999999999876654433
No 166
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=55.68 E-value=1.1e+02 Score=37.11 Aligned_cols=122 Identities=8% Similarity=-0.079 Sum_probs=79.6
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 132 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~ 132 (553)
|+.+|++.. -.|.+|..| .+|.+.+...+..+.. ..++.++|++...++-+.+ .+..+|+++..|+.++..+
T Consensus 414 ~~d~a~ii~--TSGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~ 488 (1389)
T TIGR03443 414 PDSNPTLSF--TSGSEGIPKGVLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPT 488 (1389)
T ss_pred CCCceEEEE--CCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcC
Confidence 555655433 156666665 5677766655443332 3478899998877665433 3345788899999887665
Q ss_pred CC--CChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecCC
Q 008787 133 DT--LGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTSL 182 (553)
Q Consensus 133 ~~--~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (553)
.. ..+..+...+++.++.++...+.....+........+.++.++..++.
T Consensus 489 ~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe~ 540 (1389)
T TIGR03443 489 ADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATTPIPSLHHAFFVGDI 540 (1389)
T ss_pred hhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccccCCCccEEEEeccc
Confidence 43 246688899999999999988877666544333344566666665554
No 167
>PRK06188 acyl-CoA synthetase; Validated
Probab=55.05 E-value=1.5e+02 Score=31.24 Aligned_cols=93 Identities=13% Similarity=0.011 Sum_probs=67.0
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHh
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILD 145 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 145 (553)
.+.+|..+ .+|+..+...+.. .....+++.++++...+|-+-.+...+++.+..|+..+..+ ...+..+...++
T Consensus 177 SGtTG~pk~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~ 252 (524)
T PRK06188 177 GGTTGKPKGVMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIE 252 (524)
T ss_pred CCCCCCCceeeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHH
Confidence 45555543 5667766655443 33345788999998888877666666778888899887775 456888999999
Q ss_pred hcCceEEEEcchhhhhhhc
Q 008787 146 HAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 146 ~~~~~~i~~~~~~~~~~~~ 164 (553)
..++.+++..+.....+.+
T Consensus 253 ~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 253 EQRITATFLVPTMIYALLD 271 (524)
T ss_pred HhCCEEEEehHHHHHHHHh
Confidence 9999999988877655544
No 168
>PLN02565 cysteine synthase
Probab=54.93 E-value=99 Score=30.35 Aligned_cols=73 Identities=12% Similarity=0.012 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCC-CCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 85 EVLQIVSALRASGA-EPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 85 ~v~~la~~L~~~gl-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
-+..+-..+.+.|. .+|....+-...+-.-+...++|..+|..+..+-|...+..-...++..++++++++..
T Consensus 49 ~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 49 IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 34444444555664 78866555555555566667788889999888778777888889999999999998763
No 169
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=54.61 E-value=1.4e+02 Score=32.48 Aligned_cols=122 Identities=11% Similarity=-0.037 Sum_probs=75.2
Q ss_pred CCCCceeeecccCCCCCCceEe--eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhH--HHHHHHHHhcCCEEee
Q 008787 56 PGNRMLGWRPFVDGKFGPYVWK--TYKEVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQW--VEAMEACNALSLICVP 130 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~~~--Ty~el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~ 130 (553)
++.++++.. ..|.+|..|-+ |...+. ..++..+.. .+++++|++....+-+... ...+++.+..|+..+.
T Consensus 231 ~~~~a~ily--TSGTTG~PKgV~~sh~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~ 305 (628)
T TIGR02316 231 SNEPSYILY--TSGTTGKPKGVQRDVGGYA---VALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVL 305 (628)
T ss_pred CCCcEEEEE--CCCCCCCCceEEECCcHHH---HHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEE
Confidence 455655543 15667766644 444332 123333333 4889999887776654332 3457888999999887
Q ss_pred CCC---CCChhHHHHHHhhcCceEEEEcchhhhhhhccc-----cccccCccEEEEecCC
Q 008787 131 LYD---TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD-----CRSAQRLRVMVCFTSL 182 (553)
Q Consensus 131 l~~---~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 182 (553)
.+. ...+..+-.++++.++..+++.+.....+.+.. ......++.++.-++.
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~ 365 (628)
T TIGR02316 306 YEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEP 365 (628)
T ss_pred eCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCC
Confidence 653 234677889999999999999888776654432 1223455665555544
No 170
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=54.61 E-value=1.1e+02 Score=32.01 Aligned_cols=103 Identities=12% Similarity=-0.062 Sum_probs=69.7
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 131 (553)
++.++++.. ..+.+|..+ .+|+..+...+.... ....+++++|++...++-... +...+++.+..|+..+..
T Consensus 160 ~~~~a~i~~--TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 235 (508)
T TIGR02262 160 ADDPAFWLY--SSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLM 235 (508)
T ss_pred CCCcEEEEe--CCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEe
Confidence 455665543 145555544 567777765543321 233488999998877776544 334566778899888877
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
+...+...+...++..++.+++..+.....+
T Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 236 GERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred CCCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 7666788899999999999999888765544
No 171
>PRK06164 acyl-CoA synthetase; Validated
Probab=54.37 E-value=1.1e+02 Score=32.41 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=73.0
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeC
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPL 131 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l 131 (553)
.++.++++.. ..+.+|..+ .+|...+...+..++..+ ++.+++++...+|-+-. .+..+++.+..|+.++..
T Consensus 179 ~~~~~~~i~~--TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 253 (540)
T PRK06164 179 DPDAGALLFT--TSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE 253 (540)
T ss_pred CCCceEEEEE--CCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec
Confidence 3566777663 145555544 567777776665555444 67899999888776422 334678888889888766
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
+......+...+++.++..++..+.....+.+
T Consensus 254 -~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 254 -PVFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred -CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 45677888999999999999988877666544
No 172
>PLN02736 long-chain acyl-CoA synthetase
Probab=52.15 E-value=1.8e+02 Score=31.68 Aligned_cols=88 Identities=8% Similarity=-0.059 Sum_probs=65.9
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++.++|++...++-..-+ ....+.++..|+.++.... .++.+...++..++.+
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~--Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQH--GIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 4579998888888777666433 678899988877765422 2345667788888776554 8999999999999999
Q ss_pred EeechHHHHHHHH
Q 008787 316 LAGVPRVFEKIHE 328 (553)
Q Consensus 316 l~~~p~~~~~l~~ 328 (553)
++..+..+..+.+
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9998877666544
No 173
>PRK09274 peptide synthase; Provisional
Probab=51.48 E-value=1e+02 Score=32.77 Aligned_cols=99 Identities=13% Similarity=0.109 Sum_probs=67.8
Q ss_pred CCCeEEEEecCCC-CCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 219 PFNICTIMYTSGT-SGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 219 ~~~~~~i~~TSGt-TG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
++.++++....++ ....+...+|...+...+..+...+... ++..++++...++-.. .-....+.++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~--g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAA--GIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEc
Confidence 3455555432222 1223334689999988888877766443 6788899988877543 3333466678889887776
Q ss_pred cC--ChHHHHHHhhhhcCcEEeech
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVP 320 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p 320 (553)
+. ..+.+...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 54 788899999999999998765
No 174
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=50.88 E-value=2.1e+02 Score=33.66 Aligned_cols=122 Identities=9% Similarity=-0.077 Sum_probs=78.8
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc--hhHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~ 130 (553)
.++.++++.. ..+.+|..| .+|...+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+.
T Consensus 780 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIF--SSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEE--CCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 3566665543 145566554 5677777665554433 34678899887776643 2333446777889988887
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccc---cccccCccEEEEecC
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD---CRSAQRLRVMVCFTS 181 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 181 (553)
.+...+++.+...+++.++..+...+.....+.+.. ....+.++.++.-++
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 908 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAE 908 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCC
Confidence 776678889999999999999999888776554421 122344555544443
No 175
>PLN02654 acetate-CoA ligase
Probab=50.85 E-value=1.7e+02 Score=32.06 Aligned_cols=122 Identities=11% Similarity=-0.015 Sum_probs=74.6
Q ss_pred CCCCceeeecccCCCCCCceEe--eHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCchhH--HHHHHHHHhcCCEEee
Q 008787 56 PGNRMLGWRPFVDGKFGPYVWK--TYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQW--VEAMEACNALSLICVP 130 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~~~--Ty~el~~~v~~la~~L~-~~gl~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~ 130 (553)
++.++++.. ..|.+|..|-+ |..-+.. ..+..+. ..+++++|++....+-+.-. ...+++.+..|+.+++
T Consensus 274 ~~d~~~ily--TSGTTG~PKgVv~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl 348 (666)
T PLN02654 274 AEDPLFLLY--TSGSTGKPKGVLHTTGGYMV---YTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLV 348 (666)
T ss_pred CCCceEEEe--cCCCCCCCceEEecccHHHH---HHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEE
Confidence 445554443 15666766644 4433321 1222222 34889999877766654322 3456788999999988
Q ss_pred CCCC---CChhHHHHHHhhcCceEEEEcchhhhhhhcccc-----ccccCccEEEEecCC
Q 008787 131 LYDT---LGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-----RSAQRLRVMVCFTSL 182 (553)
Q Consensus 131 l~~~---~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 182 (553)
.+.. ..++.+-.++++.++..+.+.+.....+.+... .....++.++..++.
T Consensus 349 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~ 408 (666)
T PLN02654 349 FEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEP 408 (666)
T ss_pred ECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCC
Confidence 7642 357788899999999999998887776654321 122355555555544
No 176
>PRK13383 acyl-CoA synthetase; Provisional
Probab=50.50 E-value=2.4e+02 Score=29.59 Aligned_cols=96 Identities=13% Similarity=-0.006 Sum_probs=63.8
Q ss_pred CCCCCCceEeeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCCCCCChhHHHHHHh
Q 008787 68 DGKFGPYVWKTYKEVYE-EVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLYDTLGPGAVNFILD 145 (553)
Q Consensus 68 d~~~~~~~~~Ty~el~~-~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~ 145 (553)
.+.+|..+-+.+..... ........+...+++++|++...+|-.-. .....++.+..|+.+++. +..+.+.+...++
T Consensus 183 SGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~ 261 (516)
T PRK13383 183 SGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTH-RHFDAEAALAQAS 261 (516)
T ss_pred CCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEEC-CCCCHHHHHHHHH
Confidence 67778777665443211 11122233445688999999887764322 233456667789888765 4567888888899
Q ss_pred hcCceEEEEcchhhhhhhc
Q 008787 146 HAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 146 ~~~~~~i~~~~~~~~~~~~ 164 (553)
..++..+...+.....+.+
T Consensus 262 ~~~~t~~~~~P~~~~~l~~ 280 (516)
T PRK13383 262 LHRADAFTAVPVVLARILE 280 (516)
T ss_pred HhCCcEEEecHHHHHHHHh
Confidence 9999999998887766654
No 177
>PRK11761 cysM cysteine synthase B; Provisional
Probab=50.00 E-value=1.2e+02 Score=29.31 Aligned_cols=76 Identities=8% Similarity=0.051 Sum_probs=52.3
Q ss_pred eHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 78 TYKEVYEEVLQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 78 Ty~el~~~v~~la~~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
|+++ +.+..+...+.+.| +.+|++|.. ...+-.-....++|...|..+..+-|...+..-...++..++++++++.
T Consensus 41 S~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 41 SVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred Cchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 4544 33444444445555 577777655 4444455566678888999888877777677788899999999999986
No 178
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=49.37 E-value=1.8e+02 Score=34.90 Aligned_cols=123 Identities=10% Similarity=-0.066 Sum_probs=80.3
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHH-HHHHHHhcCCEEeeC
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVE-AMEACNALSLICVPL 131 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~-~~lA~~~~G~~~v~l 131 (553)
.|+.+|++.. -.|.+|..| .+|...+...+... ....++.++|+++...+-+.+.-+ -+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~--TSGSTG~PKgV~~~h~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIF--TSGSTGRPKGVMVGQTAIVNRLLWM---QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEeccHHHHHHHHHH---HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 3555665543 156666655 56666665443332 334488999999988887766533 467788899998877
Q ss_pred CC--CCChhHHHHHHhhcCceEEEEcchhhhhhhccccc-----cccCccEEEEecCC
Q 008787 132 YD--TLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCR-----SAQRLRVMVCFTSL 182 (553)
Q Consensus 132 ~~--~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 182 (553)
++ ...++.+..++++.++.++...+.....+...... ....++.+++-++.
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEA 728 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCC
Confidence 65 34678899999999999998888766555433211 12455666655544
No 179
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.26 E-value=1.7e+02 Score=30.89 Aligned_cols=103 Identities=16% Similarity=0.018 Sum_probs=70.3
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~ 130 (553)
.++.+|++.. ..+.+|..+ .+|+..+...+...... .++.++|++....|-.-. ++..+++.+..|+.+++
T Consensus 188 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~ 262 (546)
T PRK08314 188 GPDDLAVLPY--TSGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVL 262 (546)
T ss_pred CCCCeEEEEe--CCCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEe
Confidence 3456665543 145555543 66788777655544333 367889988777664322 34567788999999887
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
.+ ..++..+..+++..++..+...+.....+.
T Consensus 263 ~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll 294 (546)
T PRK08314 263 MP-RWDREAAARLIERYRVTHWTNIPTMVVDFL 294 (546)
T ss_pred cC-CCCHHHHHHHHHHhcCceecccHHHHHHHH
Confidence 75 467788899999999999988887665554
No 180
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=48.77 E-value=1.6e+02 Score=32.19 Aligned_cols=101 Identities=12% Similarity=-0.047 Sum_probs=61.9
Q ss_pred CCCceeeecccCCCCCCceEe--eHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCC
Q 008787 57 GNRMLGWRPFVDGKFGPYVWK--TYKEVYEEVLQIVSALR-ASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD 133 (553)
Q Consensus 57 ~~~al~~~~~~d~~~~~~~~~--Ty~el~~~v~~la~~L~-~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~ 133 (553)
+.++++.. ..|.+|..|-+ |...+.. ..+..+. ..+++++|++....+-+......+++.+..|+..+..+.
T Consensus 264 ~d~~~ily--TSGTTG~PKgV~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g 338 (652)
T TIGR01217 264 DHPLWILF--SSGTTGLPKCIVHSAGGTLV---QHLKEHGLHCDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDG 338 (652)
T ss_pred CCCEEEEE--cCCCCCCCCeEEecccHHHH---HHHHHHHhccCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECC
Confidence 44554443 15666666644 4333221 1122222 348899999887776665443345688899999887752
Q ss_pred --CC-ChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 134 --TL-GPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 134 --~~-~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
.. .++.+-.++++.++.++.+.......+
T Consensus 339 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 370 (652)
T TIGR01217 339 SPGFPATNVLWDIAERTGATLFGTSAKYVMAC 370 (652)
T ss_pred CCCCCCchHHHHHHHHhCCeEEecCHHHHHHH
Confidence 22 466788999999999876665554433
No 181
>PRK08316 acyl-CoA synthetase; Validated
Probab=48.76 E-value=1.7e+02 Score=30.65 Aligned_cols=88 Identities=13% Similarity=-0.085 Sum_probs=66.8
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++..++++....+-.. ..+...+.++..|+..+..+. ..+.+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~--gi~~~~~V~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDL--GLKKGDRVAALGHNSD-AYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 5688999988888877766433 6778888888776654 334456677888888777664 7888999999999999
Q ss_pred EeechHHHHHHHH
Q 008787 316 LAGVPRVFEKIHE 328 (553)
Q Consensus 316 l~~~p~~~~~l~~ 328 (553)
++........+.+
T Consensus 112 ii~~~~~~~~~~~ 124 (523)
T PRK08316 112 FLVDPALAPTAEA 124 (523)
T ss_pred EEEccchHHHHHH
Confidence 9998887766543
No 182
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=48.51 E-value=1.5e+02 Score=32.19 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=70.9
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++.... .+| ....+|...+...+..+...+... ++.++|++...+|..- -.....+.++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSL--GVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEecc
Confidence 456677664322 122 245689999988888877766443 6789999999887653 3344566678888887765
Q ss_pred cC--ChHHHHHHhhhhcCcEEeechHH
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVPRV 322 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 322 (553)
.. .++.+...++..++.+++.....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 54 88999999999999999987653
No 183
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=48.32 E-value=1.6e+02 Score=30.44 Aligned_cols=101 Identities=13% Similarity=0.079 Sum_probs=70.7
Q ss_pred CCCCCc-eeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh----HHHHHHHHHhcCCE
Q 008787 55 YPGNRM-LGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ----WVEAMEACNALSLI 127 (553)
Q Consensus 55 ~p~~~a-l~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~----~~~~~lA~~~~G~~ 127 (553)
.||.++ +.+- .+.+|..+ ++|--.+.+.+...+.. .|+...++ ++.+|... .++..+|++..|+.
T Consensus 232 ~pdd~~niQFT---SGTTG~PKgatLsH~~~~Nna~~vg~r---~g~~e~~~--i~~~~Pl~H~~G~~~~~ma~l~~gat 303 (596)
T KOG1177|consen 232 SPDDAVNIQFT---SGTTGAPKGATLSHYNFLNNARAVGAR---AGYNEKHR--ICIPNPLYHCFGCVLGVMAALMHGAT 303 (596)
T ss_pred CCCCceEEEec---cCCCCCCcceeeehhhhhhhHHHHHHH---hCcCcceE--EEecCchHHHHHHHHHHHHHHHhCcE
Confidence 455444 4444 55566555 67777777777666653 36655333 34444433 46678999999999
Q ss_pred EeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 128 CVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 128 ~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
.|...|...+..+-+.+.+-++..++..+.-...++
T Consensus 304 ~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 304 IVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLL 339 (596)
T ss_pred EEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHh
Confidence 999899999999999999999999998877554443
No 184
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=48.27 E-value=74 Score=31.86 Aligned_cols=64 Identities=16% Similarity=0.102 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCceEEE
Q 008787 86 VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVF 153 (553)
Q Consensus 86 v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~i~ 153 (553)
+..+.-.|..+++++||-|.+ .+.-|+...=++...|+.||.++-. .+++.+...+... .++|+
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIi 127 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAII 127 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEE
Confidence 455666677778999995544 4677888999999999999998633 4677888888774 44443
No 185
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=47.97 E-value=1.5e+02 Score=30.18 Aligned_cols=83 Identities=13% Similarity=-0.026 Sum_probs=60.4
Q ss_pred EeeHHHHHHHH-HHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeC--CCCCChhHHHHHHhhcCceEE
Q 008787 76 WKTYKEVYEEV-LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL--YDTLGPGAVNFILDHAEIDFV 152 (553)
Q Consensus 76 ~~Ty~el~~~v-~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~i 152 (553)
++.|.+-.--+ .++...+.+...-+|-+|+.+.+=..+..+.+..+..+|+-+... +|..+.++....|...+..++
T Consensus 6 ~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~ 85 (406)
T TIGR00936 6 KIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVF 85 (406)
T ss_pred HHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEE
Confidence 44444433322 233444554455679999999999999999999999999987766 777788889999998888876
Q ss_pred EEcchh
Q 008787 153 FVQDKK 158 (553)
Q Consensus 153 ~~~~~~ 158 (553)
-.....
T Consensus 86 a~~~~~ 91 (406)
T TIGR00936 86 AWRGET 91 (406)
T ss_pred EecCCC
Confidence 544333
No 186
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=47.11 E-value=1.5e+02 Score=28.59 Aligned_cols=62 Identities=8% Similarity=0.042 Sum_probs=46.0
Q ss_pred HHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 94 RASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 94 ~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
.+.| |++|++ .|=...+---+...+.|...|..++.+-|..-+.+-..+|+..++.+++++.
T Consensus 54 e~~G~l~pG~t-IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGT-IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCE-EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3445 899984 3444444445556666777898888877777777889999999999999997
No 187
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=46.82 E-value=1.4e+02 Score=30.06 Aligned_cols=62 Identities=6% Similarity=-0.041 Sum_probs=47.2
Q ss_pred HcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 95 ASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 95 ~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
+.| +.+|....+....+-.-+...++|...|..+..+-|...+.+-..+++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67885545555566666667778889999888887777777778999999999999874
No 188
>PLN03102 acyl-activating enzyme; Provisional
Probab=46.69 E-value=1.1e+02 Score=32.72 Aligned_cols=85 Identities=15% Similarity=0.019 Sum_probs=63.8
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... ++..+|++...+|-.- .-....+.++..|+.++.... ..+.+...++..+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~--Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISL--NITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 588888888887777766433 6788999988888543 223345667888888776655 89999999999999999
Q ss_pred eechHHHHHH
Q 008787 317 AGVPRVFEKI 326 (553)
Q Consensus 317 ~~~p~~~~~l 326 (553)
+..+.....+
T Consensus 116 i~~~~~~~~~ 125 (579)
T PLN03102 116 FVDRSFEPLA 125 (579)
T ss_pred EEChhhHHHH
Confidence 9877665444
No 189
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=46.02 E-value=2e+02 Score=31.44 Aligned_cols=96 Identities=16% Similarity=0.079 Sum_probs=68.5
Q ss_pred CCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEec
Q 008787 219 PFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYH 298 (553)
Q Consensus 219 ~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~ 298 (553)
++.++++....+ .+ ....+|.+.+...+..+...+... ++.++|++...+|..--+ ....+.++..|+..+...
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~--Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNL--NISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeC
Confidence 455665543221 11 235789999998888887776543 788999999998876422 334566777888866554
Q ss_pred C--ChHHHHHHhhhhcCcEEeech
Q 008787 299 G--DLNALRDDLMELKPTLLAGVP 320 (553)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~l~~~p 320 (553)
. .++.+...++..++.+++...
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 3 899999999999999999865
No 190
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=45.75 E-value=56 Score=27.43 Aligned_cols=42 Identities=7% Similarity=-0.090 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCC---chhHHHHHHHHHhcCCEE
Q 008787 87 LQIVSALRASGAEPGCRVGIYGAN---CPQWVEAMEACNALSLIC 128 (553)
Q Consensus 87 ~~la~~L~~~gl~~gd~V~l~~~n---~~~~~~~~lA~~~~G~~~ 128 (553)
+.++..|.+.||.+++.|.+++.. +.....+++++-.+|..-
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~ 125 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPD 125 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCC
Confidence 467788889999999999999875 566666778888888653
No 191
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=44.95 E-value=67 Score=32.13 Aligned_cols=65 Identities=20% Similarity=0.116 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCceEEEE
Q 008787 86 VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVFV 154 (553)
Q Consensus 86 v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~i~~ 154 (553)
..++-..|...|+++||.|++-. .-+....-|+..+|+.++.++.. .+++.+...+..-- ++|+.
T Consensus 50 t~Al~~al~~l~~~~gdeVi~p~---~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 50 TSALHLALRALGLGPGDEVIVPA---YTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHHHTTGGTTSEEEEES---SS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred hHHHHHHHHhcCCCcCceEecCC---CcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 34566667778999999888754 44556778889999999998643 45677888776443 44443
No 192
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=44.77 E-value=3.8e+02 Score=28.24 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=68.9
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~ 130 (553)
.++.+|++.. ..+.+|..+ .+|...+...+.... ...+++.+|++...+|-.- .++..++..+..|...+.
T Consensus 193 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~ 267 (538)
T TIGR03208 193 SPDDVTQLIY--TSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL 267 (538)
T ss_pred CCCCeEEEEE--CCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe
Confidence 4566665543 156666655 557666655444333 3347788998888877653 244556777888887664
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
. +..++..+...+++.++.++.........+.
T Consensus 268 ~-~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 299 (538)
T TIGR03208 268 Q-DIWNPARAAELIRETGVTFTMASTPFLTDLC 299 (538)
T ss_pred c-CccCHHHHHHHHHHhCCeEEecCHHHHHHHH
Confidence 4 5678888999999999999887776655543
No 193
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=44.23 E-value=48 Score=24.56 Aligned_cols=41 Identities=15% Similarity=0.032 Sum_probs=35.0
Q ss_pred HHHHHHc-CCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEee
Q 008787 90 VSALRAS-GAEPGCRVGIYGANCPQWVEAMEACNALSLICVP 130 (553)
Q Consensus 90 a~~L~~~-gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~ 130 (553)
..+|.+. ||+.|+.++.+.....|....+=|++++.-+-+.
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~ 44 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELA 44 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeE
Confidence 3567766 9999999999999999999999999999866443
No 194
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=43.67 E-value=2e+02 Score=31.27 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=70.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++.... . ......+|.+.+...+..+...+... +...+|++...+|-.-- .+...+.++..|+..+..
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSL--GVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEec
Confidence 356677664321 1 11346789999999888887776443 67789999888776532 233456678888887766
Q ss_pred cC--ChHHHHHHhhhhcCcEEeechHH
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVPRV 322 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p~~ 322 (553)
.. .++.+...++..++.+++.....
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 54 78999999999999999986543
No 195
>PRK13388 acyl-CoA synthetase; Provisional
Probab=43.47 E-value=1.9e+02 Score=30.60 Aligned_cols=85 Identities=11% Similarity=-0.160 Sum_probs=63.0
Q ss_pred EeccHhHHHHHhhchhhhccccCCC-CCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKM-TVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
.+|...+...+..+...+... +. ..++++...++-..- -....+.++..|+..+..+. ..+.+...+++.++..
T Consensus 26 ~lTy~el~~~~~~la~~L~~~--g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIAL--ADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQL 102 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCE
Confidence 689999988888877766433 45 577888887775432 23346667888988887665 7888999999999999
Q ss_pred EeechHHHHHH
Q 008787 316 LAGVPRVFEKI 326 (553)
Q Consensus 316 l~~~p~~~~~l 326 (553)
++........+
T Consensus 103 ~i~~~~~~~~~ 113 (540)
T PRK13388 103 LVTDAEHRPLL 113 (540)
T ss_pred EEEChhhhHHH
Confidence 99877665544
No 196
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=43.16 E-value=3.4e+02 Score=28.61 Aligned_cols=103 Identities=12% Similarity=-0.000 Sum_probs=70.3
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH---HHHHHHHHhcCCEEee
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW---VEAMEACNALSLICVP 130 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~---~~~~lA~~~~G~~~v~ 130 (553)
++.++++.. ..+.+|..+ .+|...+...+..... ..+++++|++...+|-.-.+ ...+++++..|+..+.
T Consensus 181 ~~~~a~i~~--TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~ 255 (536)
T PRK10946 181 ADEVAFFQL--SGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVL 255 (536)
T ss_pred CCCeEEEEe--CCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEE
Confidence 455555433 155566654 6688888776665443 34788999988877754332 2256888899998876
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
.. ...+..+..++++.++.++...+.....+..
T Consensus 256 ~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 256 AP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred CC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 54 4466777888999999999888877665543
No 197
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=43.11 E-value=88 Score=31.51 Aligned_cols=58 Identities=14% Similarity=0.058 Sum_probs=35.4
Q ss_pred HHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCceEEE
Q 008787 92 ALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVF 153 (553)
Q Consensus 92 ~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~i~ 153 (553)
.+...++++||.|++-.+ .+.....++...|+.+++++.. .+.+++...+.. +.++|+
T Consensus 62 ~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Ii 124 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIV 124 (376)
T ss_pred HHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEE
Confidence 344457889998877444 3444556667788888877643 344556665543 445554
No 198
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=42.87 E-value=3.1e+02 Score=29.42 Aligned_cols=103 Identities=7% Similarity=-0.158 Sum_probs=68.3
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 131 (553)
++.++++.. ..|.+|..| .+|...+...+..+... .++.++|++...+|-.-. +...+++.+..|+..+.
T Consensus 198 ~~~~a~il~--TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~- 271 (600)
T PRK08279 198 AKDTAFYIY--TSGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL- 271 (600)
T ss_pred ccccEEEEE--cCCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-
Confidence 344554433 155666554 67788777766655443 478899999888776543 33345566777777655
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
.+..++..+...+...++.++...+.....+..
T Consensus 272 ~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~ 304 (600)
T PRK08279 272 RRKFSASRFWDDVRRYRATAFQYIGELCRYLLN 304 (600)
T ss_pred cCCCCHHHHHHHHHHhcceEEeehHHHHHHHHh
Confidence 456777888888999999998877666554433
No 199
>PLN00011 cysteine synthase
Probab=42.75 E-value=1.9e+02 Score=28.42 Aligned_cols=67 Identities=9% Similarity=0.030 Sum_probs=48.0
Q ss_pred HHHHHHcC-CCCC-CEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 90 VSALRASG-AEPG-CRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 90 a~~L~~~g-l~~g-d~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
.....+.| +.+| +.|. ....+-.-....++|..+|..+..+-|...+.....+++..++++++++..
T Consensus 56 l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 56 IKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33344444 6777 5554 455555556667788889998887777766677888999999999998853
No 200
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.73 E-value=2.7e+02 Score=29.71 Aligned_cols=105 Identities=10% Similarity=-0.116 Sum_probs=68.8
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEeeC
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPL 131 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l 131 (553)
.|+.++++.. -.+.+|..+ .+|+..+...+..+. .....++.+++++...+|-.-.+ ....++.+..|...+..
T Consensus 179 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~ 255 (576)
T PRK05620 179 DETTAAAICY--STGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFP 255 (576)
T ss_pred CccceeEEEE--CCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEec
Confidence 3455555543 145566555 567777654433322 11234788999988877755443 33457778888887766
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
.+..+++.+...+++.++.+++..+.....+
T Consensus 256 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 256 GPDLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 6667888999999999999998877665444
No 201
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=42.46 E-value=4.1e+02 Score=27.55 Aligned_cols=102 Identities=9% Similarity=-0.131 Sum_probs=68.5
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEeeCC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICVPLY 132 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~ 132 (553)
++.++++.. ..+.+|..+ .+|+..+...+..+.. ..++..++++....|-+.. .+..+++++..|+..+..+
T Consensus 140 ~~~~~~il~--TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~ 214 (502)
T TIGR01734 140 GDDNYYIIY--TSGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLD 214 (502)
T ss_pred CCCeEEEEE--CCCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcC
Confidence 444554433 145566554 6778777665544333 3478888888777665533 3456788999999998886
Q ss_pred CC--CChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 133 DT--LGPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 133 ~~--~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
+. .....+...+...++..+...+.....+
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 215 KDITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 54 3567788888999999888887765444
No 202
>PRK06839 acyl-CoA synthetase; Validated
Probab=42.34 E-value=4.1e+02 Score=27.48 Aligned_cols=105 Identities=9% Similarity=-0.072 Sum_probs=69.5
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~ 130 (553)
.++.++++.. ..+.+|..+ .+|+..+...+.. .....++.++|++...+|-.-. +....++++..|+..+.
T Consensus 147 ~~~~~~~i~~--TSGTTG~PK~v~~s~~~l~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~ 221 (496)
T PRK06839 147 NESASFIICY--TSGTTGKPKGAVLTQENMFWNALN---NTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIV 221 (496)
T ss_pred CCCCcEEEEe--CCCCCCCCcEEEEEhHHHHHHHHH---HHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEE
Confidence 3456665543 145566554 5677776543332 2334578899999888775433 22345677888887654
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcc
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
.....++++...+++.++.++...+.....+...
T Consensus 222 -~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 255 (496)
T PRK06839 222 -PRKFEPTKALSMIEKHKVTVVMGVPTIHQALINC 255 (496)
T ss_pred -ccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhC
Confidence 4567788889999999999999888877666543
No 203
>PLN02246 4-coumarate--CoA ligase
Probab=41.36 E-value=2.2e+02 Score=30.01 Aligned_cols=86 Identities=16% Similarity=0.049 Sum_probs=63.4
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
-.+|+..+...+..+...+.. .++..++++....+-.. .....++.++..|+..+..+. ..+.+...++..++..
T Consensus 49 ~~~ty~el~~~~~~la~~L~~--~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHK--LGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKL 125 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcE
Confidence 368999998887777766643 26788899888876552 223345667778888776655 7888999999999999
Q ss_pred EeechHHHHHH
Q 008787 316 LAGVPRVFEKI 326 (553)
Q Consensus 316 l~~~p~~~~~l 326 (553)
++........+
T Consensus 126 li~~~~~~~~~ 136 (537)
T PLN02246 126 IITQSCYVDKL 136 (537)
T ss_pred EEEccchHHHH
Confidence 98877666554
No 204
>PLN03013 cysteine synthase
Probab=41.28 E-value=1.9e+02 Score=29.69 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=51.0
Q ss_pred HHHHHHHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 87 LQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 87 ~~la~~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
..+-..+.+.| +.+|....+....+-.-+...++|...|..++.+-|...+.+-...++..++++++++..
T Consensus 159 ~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 159 YSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 33333344555 578865556665666666667788889988877777777778889999999999998754
No 205
>PRK07787 acyl-CoA synthetase; Validated
Probab=41.01 E-value=4.1e+02 Score=27.34 Aligned_cols=103 Identities=12% Similarity=-0.079 Sum_probs=70.1
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc--hhHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~ 130 (553)
.++.++++.. ..+.+|..+ .+|+..+...+..++. ..++.++|++...+|-. .-++..+++.+..|+.++.
T Consensus 126 ~~~~~a~i~~--TSGTTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 126 DPDAPALIVY--TSGTTGPPKGVVLSRRAIAADLDALAE---AWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred CCCceEEEEE--CCCCCCCCCEEEEeHHHHHHHHHHHHH---hcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 3455655443 156666555 5688877776555543 34678899876665532 3355678889999999887
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
.. ..+++.+...++ .++..+...+.....+..
T Consensus 201 ~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~ 232 (471)
T PRK07787 201 TG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAA 232 (471)
T ss_pred cC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHh
Confidence 64 457788888888 899998888776655543
No 206
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=40.88 E-value=1.1e+02 Score=30.76 Aligned_cols=56 Identities=9% Similarity=-0.040 Sum_probs=34.9
Q ss_pred HHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCceEEE
Q 008787 94 RASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVF 153 (553)
Q Consensus 94 ~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~i~ 153 (553)
...++++||.|++-.+... ....++...|+.++.++.. .+.+++...+.. +.++|+
T Consensus 64 ~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~ 124 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIV 124 (375)
T ss_pred HHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEE
Confidence 3346788998877554433 4455667788888777532 346667766654 455554
No 207
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=40.62 E-value=2.2e+02 Score=27.51 Aligned_cols=65 Identities=9% Similarity=0.000 Sum_probs=45.0
Q ss_pred HHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 92 ALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 92 ~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
...+.| +.+|++|. ....+-.-....+++.+.|..+..+-|...+.....+++..++++++++..
T Consensus 47 ~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 47 DAEKRGLLKPGKTIV-EPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCCCCCCEEE-EeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 344455 47787764 333344444555677778998877777665566688899999999998864
No 208
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=39.83 E-value=3.8e+02 Score=28.15 Aligned_cols=104 Identities=10% Similarity=-0.056 Sum_probs=70.2
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHH---HHHHHHhcCCEEe
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVE---AMEACNALSLICV 129 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~---~~lA~~~~G~~~v 129 (553)
.++.+|++.. ..+.+|..+ .+|...+...+.... ...++.++|++...+|-.-.+-. ..++++..|+..+
T Consensus 181 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v 255 (527)
T TIGR02275 181 KSDEVAFFQL--SGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVV 255 (527)
T ss_pred CCCccEEEEe--CCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEE
Confidence 4566666543 145555544 667877766554433 34578899999888776543322 3677888898876
Q ss_pred eCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 130 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 130 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
.. +...+..+-..+++.++.+++........+..
T Consensus 256 ~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 256 LA-PDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred EC-CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 64 44567788889999999999998887665543
No 209
>PRK07529 AMP-binding domain protein; Validated
Probab=39.79 E-value=1.9e+02 Score=31.52 Aligned_cols=99 Identities=11% Similarity=-0.038 Sum_probs=66.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++....+.. ..+...+|...+...+..+...+... ++..++++...+|-..-+ ....+.++..|..+.+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~--Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~~pi~ 113 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSL--GVGPGDVVAFLLPNLPET-HFALWGGEAAGIANPIN 113 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHHH-HHHHHHHHHhCEEEeCC
Confidence 445666665533221 12346789999988888877776543 678899999888865432 33445556667433222
Q ss_pred cC-ChHHHHHHhhhhcCcEEeech
Q 008787 298 HG-DLNALRDDLMELKPTLLAGVP 320 (553)
Q Consensus 298 ~~-~~~~~~~~i~~~~~t~l~~~p 320 (553)
+. .++.+...+++.++.+++...
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEeC
Confidence 33 889999999999999998854
No 210
>PRK05857 acyl-CoA synthetase; Validated
Probab=39.67 E-value=1.9e+02 Score=30.59 Aligned_cols=82 Identities=13% Similarity=0.011 Sum_probs=62.3
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++..++++...++-.. ..+...+.++..|+..+..+. ..+.+.+.++..++..
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~--g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ 116 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQ--SVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAA 116 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh--CcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCce
Confidence 4589999988888877766432 5778899888776553 334456677888988887765 7888999999999999
Q ss_pred EeechHH
Q 008787 316 LAGVPRV 322 (553)
Q Consensus 316 l~~~p~~ 322 (553)
++..+..
T Consensus 117 ii~~~~~ 123 (540)
T PRK05857 117 ALVAPGS 123 (540)
T ss_pred EEEeccc
Confidence 8887754
No 211
>PRK13382 acyl-CoA synthetase; Provisional
Probab=39.30 E-value=3.3e+02 Score=28.81 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=63.7
Q ss_pred CCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEeeCCCCCChhHHHHHHhh
Q 008787 68 DGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYDTLGPGAVNFILDH 146 (553)
Q Consensus 68 d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 146 (553)
.+.+|..+-+-+.. ......+...+...++.+++++....|-.-.+ +...++.+..|+.+++. ...+++.+...+++
T Consensus 205 SGTTG~PKgv~~s~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~ 282 (537)
T PRK13382 205 SGTTGTPKGARRSG-PGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTR-RRFDPEATLDLIDR 282 (537)
T ss_pred CCCCCCCCEEEecc-chHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEEC-CCcCHHHHHHHHHH
Confidence 66777766555443 12222333344455778899887766654332 23457777788887654 56788899999999
Q ss_pred cCceEEEEcchhhhhhhc
Q 008787 147 AEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 147 ~~~~~i~~~~~~~~~~~~ 164 (553)
.++.++...+.....+.+
T Consensus 283 ~~vt~~~~~P~~~~~l~~ 300 (537)
T PRK13382 283 HRATGLAVVPVMFDRIMD 300 (537)
T ss_pred hCCEEEEehHHHHHHHHc
Confidence 999999998887766544
No 212
>PRK07798 acyl-CoA synthetase; Validated
Probab=39.29 E-value=2.7e+02 Score=29.15 Aligned_cols=88 Identities=13% Similarity=-0.095 Sum_probs=63.3
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
-.+|...+...+..+...+... ++..++++....+-.- -.+...+.++..|+..+..+. ..+.+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~--g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQ--GLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 3688888888887777766433 5677888877765442 223345667788888777665 7888999999999999
Q ss_pred EeechHHHHHHHH
Q 008787 316 LAGVPRVFEKIHE 328 (553)
Q Consensus 316 l~~~p~~~~~l~~ 328 (553)
++........+.+
T Consensus 104 ~~~~~~~~~~~~~ 116 (533)
T PRK07798 104 LVYEREFAPRVAE 116 (533)
T ss_pred EEEchhhHHHHHH
Confidence 9988776555443
No 213
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.99 E-value=3e+02 Score=26.91 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=52.5
Q ss_pred HHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhh
Q 008787 92 ALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKEL 162 (553)
Q Consensus 92 ~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~ 162 (553)
.|.+.|+.||.+|+|..--.+-.+...+|.+ .|.-+..++...+ .-+..++..+|+..+...+..+..
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~ 240 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIM 240 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHH
Confidence 4677899999999999999999999999887 5777777776542 334678899999888776544443
No 214
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=38.79 E-value=1.8e+02 Score=30.86 Aligned_cols=86 Identities=12% Similarity=-0.116 Sum_probs=65.6
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... ++..++++....|-..-+ +...+.++..|+..+..+. ..+.+...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~--gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAA--GVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 588888888888777766432 577888888877765433 4456677888988877665 88999999999999999
Q ss_pred eechHHHHHHH
Q 008787 317 AGVPRVFEKIH 327 (553)
Q Consensus 317 ~~~p~~~~~l~ 327 (553)
+.....+..+.
T Consensus 123 ~~~~~~~~~~~ 133 (542)
T PRK06155 123 VVEAALLAALE 133 (542)
T ss_pred EEChhhHHHHH
Confidence 99887766553
No 215
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=38.71 E-value=24 Score=23.00 Aligned_cols=26 Identities=31% Similarity=0.434 Sum_probs=22.2
Q ss_pred eEEEEcCCCCCHHHHHHHHHhcCCce
Q 008787 386 RLVISGGAPLSTEVEEFLRVTCCAFL 411 (553)
Q Consensus 386 r~i~~gG~~l~~~~~~~~~~~~~~~i 411 (553)
+.+.++|.|++.++...++..|+-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 56889999999999999998887543
No 216
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=38.64 E-value=3.3e+02 Score=28.45 Aligned_cols=102 Identities=10% Similarity=-0.080 Sum_probs=69.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++.... .+. .-.+|...+...+..+...+.. .++..++++....+-..-+ ...++.++..|+..+..
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~--~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l 92 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYS--LGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPI 92 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEc
Confidence 455566554221 111 2347888888777777665533 2677889988887665432 23455678888887766
Q ss_pred cC--ChHHHHHHhhhhcCcEEeechHHHHHH
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 326 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 326 (553)
+. .++.+...++..++..++..+.....+
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 54 889999999999999999988765544
No 217
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=37.82 E-value=3.6e+02 Score=27.79 Aligned_cols=120 Identities=8% Similarity=-0.102 Sum_probs=63.6
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc-hhHHHHHHHHHhcCCEEeeC
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANC-PQWVEAMEACNALSLICVPL 131 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~-~~~~~~~lA~~~~G~~~v~l 131 (553)
.++.++++.. -.|.+|..| .+|+..+...+..++..+ ++.+. ++...+|-. .-.+..++.++..|+..+..
T Consensus 118 ~~~~~~~i~~--TSGTTG~PKgV~~t~~~l~~~~~~~~~~~---~~~~~-~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~ 191 (452)
T PRK07445 118 NLETGWIMIP--TGGSSGQIRFAIHTWETLTASVQGFQRYF---QLQQV-NSFCVLPLYHVSGLMQFMRSFLTGGKLVIL 191 (452)
T ss_pred CCCCcEEEEe--CCCCCCCCcEEEechHHHHHHHHHHHHHh---cCCCC-ceEeccCchhhhhHHHHHHHHHcCCeEEEc
Confidence 4566666543 156677666 668888877666665544 45444 344444433 22244567788899998877
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhccccccccCccEEEEecC
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDCRSAQRLRVMVCFTS 181 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (553)
+... ...........++.++...+.....+.+........++.++.-+.
T Consensus 192 ~~~~-~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~~~~l~~l~~i~~gG~ 240 (452)
T PRK07445 192 PYKR-LKSGQELPPNPSDFFLSLVPTQLQRLLQLRPQWLAQFRTILLGGA 240 (452)
T ss_pred ChHh-ccchhhhhhhcCceEEEehHHHHHHHHhhChhhhhcceEEEECCc
Confidence 5321 111122233455666666666555554322222344555554443
No 218
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=37.62 E-value=3.2e+02 Score=28.95 Aligned_cols=94 Identities=16% Similarity=0.057 Sum_probs=68.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++...-+. .+|++.+...+..+...+.... +.++|++...++-.. -.+...+.++..|+..+.+
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~--v~~gdrVail~~N~~-e~~~~~~a~~~~Gav~vpl 93 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALG--VKPGDRVAILLPNSP-EFLIAFLAALRAGAVAVPL 93 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeec
Confidence 34455555543333 8899999999988887775443 678999888777653 2233456677889888877
Q ss_pred cC--ChHHHHHHhhhhcCcEEeechH
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVPR 321 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p~ 321 (553)
.. .+..+...++..++..++....
T Consensus 94 n~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 94 NPRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEccc
Confidence 65 7888999999999999988877
No 219
>PLN02614 long-chain acyl-CoA synthetase
Probab=37.27 E-value=4.3e+02 Score=28.99 Aligned_cols=87 Identities=8% Similarity=-0.098 Sum_probs=64.4
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++.++|++...++-.. --....+.++..|+..+.... .++.+...++..++.+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~--Gv~~Gd~Vai~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSV--GVKDEAKCGIYGANSP-EWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 4578898888887777666433 6788999888877653 223345667888888776654 8899999999999999
Q ss_pred EeechHHHHHHH
Q 008787 316 LAGVPRVFEKIH 327 (553)
Q Consensus 316 l~~~p~~~~~l~ 327 (553)
++.....+..+.
T Consensus 155 vi~~~~~~~~~~ 166 (666)
T PLN02614 155 VFVEEKKISELF 166 (666)
T ss_pred EEECHHHHHHHH
Confidence 998876655443
No 220
>PLN02574 4-coumarate--CoA ligase-like
Probab=37.13 E-value=2.2e+02 Score=30.30 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=62.8
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... .++..+|++....+-.. -....++.++..|+..+..+. ..+++...++..++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~-~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHV-MGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 468888887777776665330 26788999988887543 333345667888888776654 78889999999999999
Q ss_pred eechHHHHHH
Q 008787 317 AGVPRVFEKI 326 (553)
Q Consensus 317 ~~~p~~~~~l 326 (553)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 9888765554
No 221
>PRK05850 acyl-CoA synthetase; Validated
Probab=37.06 E-value=3.2e+02 Score=29.20 Aligned_cols=87 Identities=14% Similarity=0.033 Sum_probs=64.5
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC-----ChHHHHHHhhhhc
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG-----DLNALRDDLMELK 312 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~-----~~~~~~~~i~~~~ 312 (553)
..+|+..+...+..+...+... + ..+|++...++-.. --....+.++..|+.++..+. ..+.+...++..+
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~--g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~ 109 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRH--G-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTS 109 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHh--C-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcC
Confidence 5689999988888877776443 2 46788888877552 333456667888988887653 5678999999999
Q ss_pred CcEEeechHHHHHHHH
Q 008787 313 PTLLAGVPRVFEKIHE 328 (553)
Q Consensus 313 ~t~l~~~p~~~~~l~~ 328 (553)
+..++..+.....+.+
T Consensus 110 ~~~il~~~~~~~~~~~ 125 (578)
T PRK05850 110 PSVVLTTSAVVDDVTE 125 (578)
T ss_pred CCEEEEcHHHHHHHHH
Confidence 9999998887766543
No 222
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=36.92 E-value=6e+02 Score=29.96 Aligned_cols=122 Identities=9% Similarity=-0.040 Sum_probs=77.0
Q ss_pred CCCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCch--hHHHHHHHHHhcCCEEee
Q 008787 55 YPGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCP--QWVEAMEACNALSLICVP 130 (553)
Q Consensus 55 ~p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~ 130 (553)
.|+.++++.. ..+.+|..| .+|...+...+..... ..++.++|++...+|-.- .+...++..+..|...+.
T Consensus 791 ~~~d~a~i~~--TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILF--TSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEE--CCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 4566665543 155666655 5677777666555543 347789999888877532 233456777888988887
Q ss_pred CCCCCChhHHHHHHhhcCceEEEEcchhhhhhhccc-cccccCccEEEEecC
Q 008787 131 LYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPD-CRSAQRLRVMVCFTS 181 (553)
Q Consensus 131 l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 181 (553)
.+.....+.+...+++.++..+...+.....+.+.. ......++.++.-++
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~ 917 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAE 917 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCC
Confidence 765555667778889999999988877665543322 112234555544443
No 223
>PLN02479 acetate-CoA ligase
Probab=36.73 E-value=3.8e+02 Score=28.53 Aligned_cols=85 Identities=11% Similarity=-0.095 Sum_probs=64.4
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... ++..+|++....+..- -.....+.++..|+..+..+. ..+.+...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~--g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKR--SIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 578898888888877766433 6788999888877543 223345667888888777665 78899999999999999
Q ss_pred eechHHHHHH
Q 008787 317 AGVPRVFEKI 326 (553)
Q Consensus 317 ~~~p~~~~~l 326 (553)
+..+..+...
T Consensus 122 i~~~~~~~~~ 131 (567)
T PLN02479 122 MVDQEFFTLA 131 (567)
T ss_pred EEchhhhhHH
Confidence 9987765543
No 224
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=36.07 E-value=5.2e+02 Score=28.93 Aligned_cols=105 Identities=15% Similarity=0.095 Sum_probs=71.0
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccc-cCCCCCC-----------cEEEEecChHHHHHHHHHH
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQF-EDKMTVD-----------DVYLSFLPLAHILDRVIEE 285 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~p~~~~~g~~~~~ 285 (553)
.++.++++.... |.+ ...+|...+...+..+...+... ..++.++ |++...++-. .--+...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~-~ew~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS-INWLVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC-HHHHHHHH
Confidence 345666653322 211 24688998888888887776432 1256665 7777776654 23344566
Q ss_pred HHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeechHHHHHHH
Q 008787 286 YFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFEKIH 327 (553)
Q Consensus 286 ~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~ 327 (553)
.++..|+..+-+.. .++.+...+++-++.+++..+.++..+.
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~ 192 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLL 192 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHH
Confidence 77888888776554 8999999999999999998777766554
No 225
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=36.05 E-value=89 Score=24.97 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=33.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCE
Q 008787 87 LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 127 (553)
Q Consensus 87 ~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 127 (553)
..+...+.+.|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35566677889999999999999988888888888888874
No 226
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=35.98 E-value=2.1e+02 Score=27.31 Aligned_cols=96 Identities=16% Similarity=0.084 Sum_probs=59.7
Q ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCC----ChhHHHHHHhhcCceEE
Q 008787 77 KTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTL----GPGAVNFILDHAEIDFV 152 (553)
Q Consensus 77 ~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~i 152 (553)
+-.+-+ .|...||..|++. |-.|.+++.+....... .+...|..+..++... ..+++...++..+++++
T Consensus 12 iG~GHv-~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~v 84 (279)
T TIGR03590 12 IGLGHV-MRCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDIL 84 (279)
T ss_pred ccccHH-HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEE
Confidence 444443 4678899999774 55777777776555433 3357888877775432 24468888999999999
Q ss_pred EEcchh-hhhhhccccccccCccEEEEecCC
Q 008787 153 FVQDKK-VKELLSPDCRSAQRLRVMVCFTSL 182 (553)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 182 (553)
|+|.-. ...+.+..+ .....++++++.
T Consensus 85 V~D~y~~~~~~~~~~k---~~~~~l~~iDD~ 112 (279)
T TIGR03590 85 IVDHYGLDADWEKLIK---EFGRKILVIDDL 112 (279)
T ss_pred EEcCCCCCHHHHHHHH---HhCCeEEEEecC
Confidence 998743 222222222 123355666654
No 227
>PRK13391 acyl-CoA synthetase; Provisional
Probab=35.98 E-value=3.6e+02 Score=28.20 Aligned_cols=99 Identities=11% Similarity=0.009 Sum_probs=70.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++...++ -.+|...+...+..+...+... ++..++++....+-..-+ +..++.++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~--g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSL--GLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecc
Confidence 3455666554332 2488888888887777766432 567788887776665422 33456678888888776
Q ss_pred cC--ChHHHHHHhhhhcCcEEeechHHHHHH
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVPRVFEKI 326 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p~~~~~l 326 (553)
+. ..+.+...++..++..++..+.....+
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 55 788999999999999999988776554
No 228
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=34.75 E-value=17 Score=17.70 Aligned_cols=9 Identities=67% Similarity=1.210 Sum_probs=6.8
Q ss_pred eeccccCCC
Q 008787 414 GYGLTETCG 422 (553)
Q Consensus 414 ~YG~tE~g~ 422 (553)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 589998754
No 229
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=34.51 E-value=2.5e+02 Score=27.45 Aligned_cols=64 Identities=14% Similarity=-0.001 Sum_probs=46.5
Q ss_pred HHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 93 LRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 93 L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
+.+.|..+++.|.... .+-.-....++|...|..++.+-|...+......++..++++++++..
T Consensus 43 a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 43 SAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3333444566665544 445555667888899999888888777778889999999999998765
No 230
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=34.33 E-value=3e+02 Score=26.51 Aligned_cols=66 Identities=8% Similarity=0.006 Sum_probs=45.8
Q ss_pred HHHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 91 SALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 91 ~~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
..+.+.| +.+|++|. ....+-.-....++|...|..+..+-|...+..-...++..++++++++..
T Consensus 47 ~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 47 EDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3344445 47787664 444444555566677789988887777766666678899999999998754
No 231
>PRK07470 acyl-CoA synthetase; Validated
Probab=34.24 E-value=5.7e+02 Score=26.78 Aligned_cols=106 Identities=12% Similarity=0.010 Sum_probs=66.2
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCC-
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLY- 132 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~- 132 (553)
++.++++.. ..+.+|..+ .+|...+...+......+. .++.++|++...+|-+-.+-...+..+..|+..+.++
T Consensus 162 ~~~~a~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~ 238 (528)
T PRK07470 162 HDDPCWFFF--TSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPS 238 (528)
T ss_pred CCCeEEEEe--CCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecc
Confidence 455665543 145556554 5677777543332211111 2567889888888766544333344455666655543
Q ss_pred CCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 133 DTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 133 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
...+++.+...++..++.+++..+.....+..
T Consensus 239 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 239 ERFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred cCcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 45678889999999999999998887766644
No 232
>PRK09088 acyl-CoA synthetase; Validated
Probab=34.08 E-value=3.5e+02 Score=28.00 Aligned_cols=82 Identities=16% Similarity=0.030 Sum_probs=60.4
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++..++++...++-..- .+..++.++..|+..+..+. ..+.+...+++.+++.
T Consensus 21 ~~~ty~~l~~~v~~~a~~l~~~--g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 97 (488)
T PRK09088 21 RRWTYAELDALVGRLAAVLRRR--GCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRL 97 (488)
T ss_pred cEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCE
Confidence 3589999988877776666432 56788888887776543 23345667888888777664 7888999999999999
Q ss_pred EeechHH
Q 008787 316 LAGVPRV 322 (553)
Q Consensus 316 l~~~p~~ 322 (553)
++.....
T Consensus 98 ii~~~~~ 104 (488)
T PRK09088 98 LLGDDAV 104 (488)
T ss_pred EEEcchh
Confidence 9876543
No 233
>PRK10717 cysteine synthase A; Provisional
Probab=34.07 E-value=3e+02 Score=27.04 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=46.1
Q ss_pred HHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 93 LRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 93 L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
+.+.| +++|++|.- ...+-.-..+.++|..+|..+..+-|...++.....++..++++++++..
T Consensus 55 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33444 467776544 44455556667777889998887777766777888999999999988853
No 234
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=33.98 E-value=3.4e+02 Score=26.12 Aligned_cols=64 Identities=8% Similarity=-0.018 Sum_probs=45.9
Q ss_pred HHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 92 ALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 92 ~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
...+.| +.+|+.|.- ...+-.-....++|.+.|..+..+-|...+..-...++..++++++++.
T Consensus 49 ~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 49 EAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 334444 477876655 4445555666677888999888777776666777889999999998875
No 235
>PRK07514 malonyl-CoA synthase; Validated
Probab=33.90 E-value=2.4e+02 Score=29.34 Aligned_cols=87 Identities=14% Similarity=0.057 Sum_probs=64.5
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++..++++....+-.. -.....+.++..|+..+..+. ....+...++..++..
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~--g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVAL--GVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 4688888888777777666433 6778899888877652 333345667888888777665 7888999999999999
Q ss_pred EeechHHHHHHH
Q 008787 316 LAGVPRVFEKIH 327 (553)
Q Consensus 316 l~~~p~~~~~l~ 327 (553)
++..+.....+.
T Consensus 104 ii~~~~~~~~~~ 115 (504)
T PRK07514 104 VVCDPANFAWLS 115 (504)
T ss_pred EEEccchhHHHH
Confidence 999887766543
No 236
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=33.80 E-value=2.6e+02 Score=29.59 Aligned_cols=98 Identities=17% Similarity=0.137 Sum_probs=68.7
Q ss_pred EEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEE-EecC-C
Q 008787 223 CTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVG-YYHG-D 300 (553)
Q Consensus 223 ~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~-~~~~-~ 300 (553)
..++|-+-..+. -.+|.+.|...+..+...+.... +. ++|++..++|..--. ....+.++..|+... ++++ .
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~-gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLG-GV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhC-CC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCCC
Confidence 344454444333 67888989888888777764322 45 999999999987532 234555667776533 3333 8
Q ss_pred hHHHHHHhhhhcCcEEeechHHHHHH
Q 008787 301 LNALRDDLMELKPTLLAGVPRVFEKI 326 (553)
Q Consensus 301 ~~~~~~~i~~~~~t~l~~~p~~~~~l 326 (553)
++.+...+..-.+.++++....++..
T Consensus 101 ~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 101 AEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred HHHHHHHHHccCCCEEEEeccccccc
Confidence 99999999999999999888777654
No 237
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=33.47 E-value=2.3e+02 Score=29.94 Aligned_cols=86 Identities=9% Similarity=0.057 Sum_probs=63.6
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|+..+...+..+...+... ++..++++...++-..-+ ....+.++..|+..+..+. ..+.+...++..++..
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSL--GLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKL 130 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeE
Confidence 4689999988888877766433 577888888877665422 2345667888888776554 6788999999999999
Q ss_pred EeechHHHHHH
Q 008787 316 LAGVPRVFEKI 326 (553)
Q Consensus 316 l~~~p~~~~~l 326 (553)
++.....+..+
T Consensus 131 ~i~~~~~~~~~ 141 (546)
T PLN02330 131 IVTNDTNYGKV 141 (546)
T ss_pred EEEccchhhhH
Confidence 98887766544
No 238
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=33.33 E-value=5.7e+02 Score=26.91 Aligned_cols=97 Identities=9% Similarity=-0.082 Sum_probs=63.1
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 131 (553)
++.++++.. ..+.+|..+ .+|+..+...+.. .....++.++|++....|-.-. ++..+++.+..|+..++.
T Consensus 186 ~~d~a~i~~--TSGTTG~PK~v~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~ 260 (547)
T PRK06087 186 GDELAAVLF--TSGTEGLPKGVMLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLL 260 (547)
T ss_pred CCCeEEEEe--CCCCCCCCcEEEEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEec
Confidence 445555443 145566555 4566666544433 3334578899988877765433 345677778889888876
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchh
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKK 158 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~ 158 (553)
. ..+++.+-..++..++.+++.....
T Consensus 261 ~-~~~~~~~~~~i~~~~~t~~~~~~~~ 286 (547)
T PRK06087 261 D-IFTPDACLALLEQQRCTCMLGATPF 286 (547)
T ss_pred C-CCCHHHHHHHHHHcCCCEEeccHHH
Confidence 5 4567788888999999988765443
No 239
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.00 E-value=3e+02 Score=28.68 Aligned_cols=86 Identities=10% Similarity=-0.084 Sum_probs=63.8
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... ++..++++....+-.. ......+.++..|+..+..+. ..+.+...+++.+++.+
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~--g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRAL--GLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 477888877777776666443 5778899888877653 334456677888988877654 78889999999999999
Q ss_pred eechHHHHHHH
Q 008787 317 AGVPRVFEKIH 327 (553)
Q Consensus 317 ~~~p~~~~~l~ 327 (553)
+..+.....+.
T Consensus 88 i~~~~~~~~~~ 98 (502)
T PRK08276 88 IVSAALADTAA 98 (502)
T ss_pred EEccchhhHHH
Confidence 99887765543
No 240
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=31.79 E-value=54 Score=23.70 Aligned_cols=22 Identities=41% Similarity=0.454 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEE
Q 008787 86 VLQIVSALRASGAEPGCRVGIY 107 (553)
Q Consensus 86 v~~la~~L~~~gl~~gd~V~l~ 107 (553)
-..+-..|.++|+++||.|-+.
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 42 KLGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HCCHHHHHHHcCCCCCCEEEEc
Confidence 3345667888999999999874
No 241
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.75 E-value=2.4e+02 Score=30.02 Aligned_cols=85 Identities=15% Similarity=0.030 Sum_probs=64.0
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|+..+...+..+...+... ++..+|++....|-..- .+...+.++..|+..+.... ..+.+...+++.++..+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~--gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRAL--GVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 478998888888777766433 57788998888776543 23345667888888776654 89999999999999999
Q ss_pred eechHHHHHH
Q 008787 317 AGVPRVFEKI 326 (553)
Q Consensus 317 ~~~p~~~~~l 326 (553)
+........+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9877766554
No 242
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=31.34 E-value=91 Score=29.87 Aligned_cols=53 Identities=8% Similarity=-0.045 Sum_probs=43.6
Q ss_pred eEeeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCE
Q 008787 75 VWKTYKEVYE-----EVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 127 (553)
Q Consensus 75 ~~~Ty~el~~-----~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 127 (553)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3577777763 2466777788889999999999999999999999999999975
No 243
>PRK10595 SOS cell division inhibitor; Provisional
Probab=31.26 E-value=1.8e+02 Score=25.25 Aligned_cols=66 Identities=18% Similarity=-0.029 Sum_probs=43.8
Q ss_pred HHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCC--C-CCChhHHH---HHHhhcCceEEEEc
Q 008787 90 VSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLY--D-TLGPGAVN---FILDHAEIDFVFVQ 155 (553)
Q Consensus 90 a~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~--~-~~~~~~l~---~~l~~~~~~~i~~~ 155 (553)
+.+|.+.|+..+..+.|...+..+.+.++-=|++.|..-+.+- + ..+.++++ ..-+..++-.++.-
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~R 141 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIMR 141 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 5678889998877666767778899889999999986443332 3 66655533 33344455444443
No 244
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=30.84 E-value=2e+02 Score=28.91 Aligned_cols=63 Identities=19% Similarity=0.209 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCceEEE
Q 008787 87 LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVF 153 (553)
Q Consensus 87 ~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~i~ 153 (553)
..+...|...++++||.|++-.+. +.....++...|+.++.++.. .+.+.+...+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 344445555677889987765443 333344566788888777532 345667666643 444444
No 245
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=30.73 E-value=3.3e+02 Score=29.84 Aligned_cols=87 Identities=10% Similarity=-0.094 Sum_probs=64.9
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++.++|++...++-.. --+...+.++..|+..+.... ..+.+...+++.++.+
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~--Gv~~gd~Vai~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSR--GVNPGDRCGIYGSNCP-EWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 4689999988888877766433 6788999888877653 223345667888888776654 7889999999999999
Q ss_pred EeechHHHHHHH
Q 008787 316 LAGVPRVFEKIH 327 (553)
Q Consensus 316 l~~~p~~~~~l~ 327 (553)
++.....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998776655543
No 246
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=30.64 E-value=3.1e+02 Score=30.26 Aligned_cols=89 Identities=15% Similarity=0.004 Sum_probs=66.0
Q ss_pred eEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCc
Q 008787 237 GVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPT 314 (553)
Q Consensus 237 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t 314 (553)
-..+|...+...+..+...+... ++.+++++...++-.. -.+...+.++..|+..+.... .++.+...++..++.
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~l--G~~~gd~Vai~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 180 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVAL--GHNKEERVAIFADTRA-EWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVT 180 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCC
Confidence 35688888888887776655432 6788899888776543 223345667888888776554 889999999999999
Q ss_pred EEeechHHHHHHHH
Q 008787 315 LLAGVPRVFEKIHE 328 (553)
Q Consensus 315 ~l~~~p~~~~~l~~ 328 (553)
+++.....+..+.+
T Consensus 181 ~li~~~~~~~~l~~ 194 (696)
T PLN02387 181 TVICDSKQLKKLID 194 (696)
T ss_pred EEEECHHHHHHHHH
Confidence 99998887776654
No 247
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=30.38 E-value=4.3e+02 Score=28.56 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=68.5
Q ss_pred CCCCeEEEEecCCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEe
Q 008787 218 QPFNICTIMYTSGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYY 297 (553)
Q Consensus 218 ~~~~~~~i~~TSGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~ 297 (553)
.++.++++.. +..+| ..-.+|.+.+...+..+...+... +...+|++...+|..- -.....+.++..|+..+..
T Consensus 66 ~p~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIAV-STETD--EERTYTFRQLHDEVNRMAAMLRSL--GVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEEE-cCCCC--ceEEEeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEee
Confidence 3556666543 22222 234689999988887777766433 6789999998887753 2233466678888887665
Q ss_pred cC--ChHHHHHHhhhhcCcEEeechH
Q 008787 298 HG--DLNALRDDLMELKPTLLAGVPR 321 (553)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~p~ 321 (553)
.. ..+.+...++..++.+++....
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccC
Confidence 54 7889999999999999987653
No 248
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=30.36 E-value=41 Score=24.34 Aligned_cols=29 Identities=28% Similarity=0.268 Sum_probs=17.3
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 008787 78 TYKEVYEEVLQIVSALRASGAEPGCRVGI 106 (553)
Q Consensus 78 Ty~el~~~v~~la~~L~~~gl~~gd~V~l 106 (553)
-|-+-.-+...+-..|.++|++.||+|-|
T Consensus 34 ~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 34 RRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 33333334455667788999999999976
No 249
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.36 E-value=6.4e+02 Score=26.54 Aligned_cols=95 Identities=15% Similarity=0.074 Sum_probs=61.6
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEeCCch-hHHHHHHHHHhcCCEEeeCC-CCCChhHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGA-EPGCRVGIYGANCP-QWVEAMEACNALSLICVPLY-DTLGPGAVNF 142 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~ 142 (553)
.+.+|..+ .+|+..+...+..+ ....++ ..++++....|..- ..+..+++.+..|+..+..+ ....++.+..
T Consensus 183 SGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~ 259 (542)
T PRK07786 183 SGTTGRPKGAVLTHANLTGQAMTC---LRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLD 259 (542)
T ss_pred CCCCccchhhhhhHHHHHHHHHHH---HHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHH
Confidence 56666655 55666665554443 233456 44555554444321 12456788888999887654 2457888999
Q ss_pred HHhhcCceEEEEcchhhhhhhcc
Q 008787 143 ILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 143 ~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
.++..++..++..+.....+...
T Consensus 260 ~i~~~~~t~~~~~P~~l~~l~~~ 282 (542)
T PRK07786 260 VLEAEKVTGIFLVPAQWQAVCAE 282 (542)
T ss_pred HHHHcCCeEEEehHHHHHHHHhC
Confidence 99999999999988877666543
No 250
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=29.43 E-value=2.5e+02 Score=28.12 Aligned_cols=64 Identities=16% Similarity=0.009 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCC-----CCChhHHHHHHhh---cCceEEE
Q 008787 87 LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYD-----TLGPGAVNFILDH---AEIDFVF 153 (553)
Q Consensus 87 ~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~i~ 153 (553)
..+...+...++++||.|++-.+. +....-++...|+.++.++. ..+.+++...++. -+.++|+
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 445555555678899987776554 33445566778988877654 2456777777763 2445554
No 251
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=29.26 E-value=3.6e+02 Score=25.58 Aligned_cols=71 Identities=14% Similarity=-0.039 Sum_probs=49.1
Q ss_pred HHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEee--CCCCCChhHHHHHHhhcCceEEEEcchhhhh
Q 008787 91 SALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVP--LYDTLGPGAVNFILDHAEIDFVFVQDKKVKE 161 (553)
Q Consensus 91 ~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~--l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~ 161 (553)
..+.+...-+|-+|+.++.=..+..+.+..+..+|+-+.. -||..+.++....|...++.+.--.....+.
T Consensus 33 ~~~~~~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~get~ee 105 (268)
T PF05221_consen 33 ERFEAEKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWKGETDEE 105 (268)
T ss_dssp HHHTTT-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-TT--HHH
T ss_pred HHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeCCCCHHH
Confidence 3344445567999999999999999999999999997764 4677888999999998888776544443333
No 252
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=29.00 E-value=1.3e+02 Score=23.43 Aligned_cols=52 Identities=8% Similarity=-0.066 Sum_probs=38.2
Q ss_pred EeeHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCE
Q 008787 76 WKTYKEVYEE----VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 127 (553)
Q Consensus 76 ~~Ty~el~~~----v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 127 (553)
.+.+.++.+. ...+...+...++.+++.|.++|.++.....+...+..+|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4566665433 235566666678888999999999988877778888888874
No 253
>PRK07868 acyl-CoA synthetase; Validated
Probab=28.84 E-value=4.8e+02 Score=30.33 Aligned_cols=102 Identities=9% Similarity=-0.112 Sum_probs=62.3
Q ss_pred CCCCceeeecccC--CCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHH--HHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVD--GKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWV--EAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d--~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~l 131 (553)
++.+|++.. . +.++..+.+|.......+. ......++.++|++...+|=+-.+- ..+++++..|.. +.+
T Consensus 605 ~dd~a~Iiy---TgStgtpKpk~vt~~~~~~~~~---~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~-vvl 677 (994)
T PRK07868 605 ARDLAFIAF---STAGGELVAKQITNYRWALSAF---GTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR-IAL 677 (994)
T ss_pred CCccEEEEE---eCCCCCcCcEEEehHHHHHHHH---hhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE-EEe
Confidence 456666655 3 2334445666433221111 1112347888999888877553322 233444544544 555
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
.+..+++.+...+++.++.++.........+.+
T Consensus 678 ~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 678 SRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 567889999999999999999988877766654
No 254
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=28.41 E-value=2.9e+02 Score=28.48 Aligned_cols=52 Identities=13% Similarity=0.016 Sum_probs=29.5
Q ss_pred EEEeCCchhHHH-HHHHHHhcCCEEeeCCCCCC--hhHHHHHHhhcCceEEEEcc
Q 008787 105 GIYGANCPQWVE-AMEACNALSLICVPLYDTLG--PGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 105 ~l~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~i~~~~ 156 (553)
++...++...+. +++++++.|-.++..++.+. ..-+...+...++++.+++.
T Consensus 79 av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 79 AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 455666655554 44456667766555544442 23344446677777777765
No 255
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=28.22 E-value=4.7e+02 Score=24.17 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=44.7
Q ss_pred HHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 92 ALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 92 ~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
.+.+.|..+++.|... ..+-.-..+.++|...|..++.+-|...+..-...++..+++++.++..
T Consensus 41 ~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 41 LAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3444443345555444 3345555666777779988888777777777788889999999988876
No 256
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=28.10 E-value=4.8e+02 Score=28.31 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=74.1
Q ss_pred HcCCCCCceeeecccCCCCCCc--eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHH-HHHHhcCCEEe
Q 008787 53 QKYPGNRMLGWRPFVDGKFGPY--VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAM-EACNALSLICV 129 (553)
Q Consensus 53 ~~~p~~~al~~~~~~d~~~~~~--~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~-lA~~~~G~~~v 129 (553)
...||-+|.+..- .|.+|.. ..+||.-+..++..+...+. -++++|+++-++|-+-=+=-++ .++...|.+.+
T Consensus 187 ~~~~dDlatiiYT--SGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~ 262 (613)
T COG1022 187 PPKPDDLATIIYT--SGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTV 262 (613)
T ss_pred CCCccceEEEEEc--CCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEE
Confidence 4567777765541 4555555 48999999999988888775 4789999999999663332232 45555555544
Q ss_pred eCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhcc
Q 008787 130 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSP 165 (553)
Q Consensus 130 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~ 165 (553)
.. ..+...+..-+...+|.+++.-+...+.+.+.
T Consensus 263 ~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 263 LF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred Ee--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 33 33678889999999999999888766555443
No 257
>PRK06060 acyl-CoA synthetase; Validated
Probab=28.01 E-value=4.7e+02 Score=28.84 Aligned_cols=123 Identities=11% Similarity=-0.044 Sum_probs=76.1
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh--HHHHHHHHHhcCCEEeeC
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ--WVEAMEACNALSLICVPL 131 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l 131 (553)
++.+|++.. ..|.+|..| .+|...+...+..+.. ...++.++|++....+-... +...++..+..|+.++..
T Consensus 144 ~~~~a~il~--TSGSTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 219 (705)
T PRK06060 144 GDALAYATY--TSGTTGPPKAAIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN 219 (705)
T ss_pred CCCeEEEEE--CCCCCCCCcEEEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe
Confidence 455554432 156677665 5566666655443322 13467888887766553322 233456778889888877
Q ss_pred CCCCChhHHHHHHhhcCceEEEEcchhhhhhhcccc-ccccCccEEEEecCC
Q 008787 132 YDTLGPGAVNFILDHAEIDFVFVQDKKVKELLSPDC-RSAQRLRVMVCFTSL 182 (553)
Q Consensus 132 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 182 (553)
+....++.+..+++..++.++...+.....+.+... .....++.++.-++.
T Consensus 220 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe~ 271 (705)
T PRK06060 220 SAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGEA 271 (705)
T ss_pred CCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecCc
Confidence 666777788888999999999888877665544321 223455655555544
No 258
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=27.77 E-value=4.4e+02 Score=27.79 Aligned_cols=95 Identities=13% Similarity=-0.026 Sum_probs=60.5
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEeeCCCCCChhHHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVS-ALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYDTLGPGAVNFI 143 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~-~L~~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 143 (553)
.+.+|..+ .+|...+. ...+.. .....+++.+|++....|-.-.+ ....+.++..|+.++........+.+...
T Consensus 186 SGTTG~PKgv~~s~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 263 (542)
T PRK06018 186 SGTTGDPKGVLYSHRSNV--LHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYEL 263 (542)
T ss_pred CCCCCCCcEEEEechhHH--HHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHH
Confidence 56677766 45555431 111222 22234788999887776643222 22245667888887765556677888899
Q ss_pred HhhcCceEEEEcchhhhhhhc
Q 008787 144 LDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 144 l~~~~~~~i~~~~~~~~~~~~ 164 (553)
+++.++.++...+.....+.+
T Consensus 264 l~~~~~t~~~~~p~~~~~l~~ 284 (542)
T PRK06018 264 LDTEKVTFTAGVPTVWLMLLQ 284 (542)
T ss_pred HHhcCCceeecCcHHHHHHHh
Confidence 999999999988877655543
No 259
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=27.30 E-value=5.2e+02 Score=24.27 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhc------C--CEEeeCCCCC---ChhHHHHHHhhcCceEE
Q 008787 85 EVLQIVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNAL------S--LICVPLYDTL---GPGAVNFILDHAEIDFV 152 (553)
Q Consensus 85 ~v~~la~~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~i 152 (553)
...++...+.+.+ +.+|++|+|...-+.|+.+++..+..+ + ..++-++... ..+.+..+.+..+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3445555666664 578999999999999998877666442 2 3444555433 33445667777777766
Q ss_pred EEcc
Q 008787 153 FVQD 156 (553)
Q Consensus 153 ~~~~ 156 (553)
+.+.
T Consensus 92 v~~~ 95 (258)
T PRK10696 92 IEEQ 95 (258)
T ss_pred EEEe
Confidence 6553
No 260
>PRK08162 acyl-CoA synthetase; Validated
Probab=27.26 E-value=3e+02 Score=29.09 Aligned_cols=86 Identities=13% Similarity=-0.067 Sum_probs=65.0
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... ++..++++...+|-.. -.+...+.++..|+..+..+. ..+.+...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~--g~~~g~~v~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALARR--GIGRGDTVAVLLPNIP-AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCch-HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 589999988888887766433 5778899888877653 223345667788887776655 78999999999999999
Q ss_pred eechHHHHHHH
Q 008787 317 AGVPRVFEKIH 327 (553)
Q Consensus 317 ~~~p~~~~~l~ 327 (553)
+..+.....+.
T Consensus 120 ~~~~~~~~~~~ 130 (545)
T PRK08162 120 IVDTEFAEVAR 130 (545)
T ss_pred EEccchhhHHH
Confidence 99887766553
No 261
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.25 E-value=4.9e+02 Score=27.62 Aligned_cols=87 Identities=14% Similarity=0.056 Sum_probs=62.9
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|+..+...+..+...+... .++..++++...++-.. ......+.++..|+..+..+. ..+.+...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~-~gi~~gd~Vai~~~n~~-~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQH-TDLKPGDRIAVQLPNVL-QYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 3589999988888777665321 15778899888877653 223345667888888876654 7889999999999999
Q ss_pred EeechHHHHHH
Q 008787 316 LAGVPRVFEKI 326 (553)
Q Consensus 316 l~~~p~~~~~l 326 (553)
++........+
T Consensus 126 ii~~~~~~~~~ 136 (562)
T PRK05677 126 LVCLANMAHLA 136 (562)
T ss_pred EEEecchhhhH
Confidence 98876655433
No 262
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=27.08 E-value=1.2e+02 Score=29.65 Aligned_cols=52 Identities=4% Similarity=-0.025 Sum_probs=42.6
Q ss_pred EeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCE
Q 008787 76 WKTYKEVYEE------VLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLI 127 (553)
Q Consensus 76 ~~Ty~el~~~------v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 127 (553)
.+.|.++.+. ...+...+.++|+.+++.|.++|..+.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 5667766442 466777788889999999999999999998899999999975
No 263
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=27.08 E-value=28 Score=24.46 Aligned_cols=7 Identities=57% Similarity=1.526 Sum_probs=6.1
Q ss_pred CccccCc
Q 008787 493 GWFHTGD 499 (553)
Q Consensus 493 g~~~TGD 499 (553)
-||.|||
T Consensus 73 hwydtgd 79 (80)
T PF05452_consen 73 HWYDTGD 79 (80)
T ss_pred ccccCCC
Confidence 3999998
No 264
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=26.87 E-value=4.1e+02 Score=27.45 Aligned_cols=63 Identities=13% Similarity=0.060 Sum_probs=45.7
Q ss_pred HHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 93 LRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 93 L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
..+.| +.+|++|.- +..+-.-....++|.+.|..+..+-|...+.+-...++..++++++++.
T Consensus 53 a~~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 53 AEASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 33445 467776544 4555555667778888999888777766666677888999999998875
No 265
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=26.58 E-value=4.1e+02 Score=26.39 Aligned_cols=95 Identities=11% Similarity=0.082 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC---------CChhHHHHHHhhcCc
Q 008787 79 YKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT---------LGPGAVNFILDHAEI 149 (553)
Q Consensus 79 y~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~---------~~~~~l~~~l~~~~~ 149 (553)
-.++......++..|.+. +| | +.++..+..+.+++.+|+..+++.++-+... ...+..++++... +
T Consensus 49 ~~~~~~~~~~~~~~~~~~--~P-d-~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~l-a 123 (346)
T PF02350_consen 49 AKSTGLAIIELADVLERE--KP-D-AVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKL-A 123 (346)
T ss_dssp HHHHHHHHHHHHHHHHHH--T--S-EEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHhc--CC-C-EEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhh-h
Confidence 366777788888888875 44 4 4556677889999999999999999999766 3344466666555 4
Q ss_pred eEEEEcch-hhhhhhccccccccCccEEEEecCC
Q 008787 150 DFVFVQDK-KVKELLSPDCRSAQRLRVMVCFTSL 182 (553)
Q Consensus 150 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (553)
++.|+..+ ....+.+.. .....+++.+..
T Consensus 124 ~lhf~~t~~~~~~L~~~G----~~~~rI~~vG~~ 153 (346)
T PF02350_consen 124 HLHFAPTEEARERLLQEG----EPPERIFVVGNP 153 (346)
T ss_dssp SEEEESSHHHHHHHHHTT------GGGEEE---H
T ss_pred hhhccCCHHHHHHHHhcC----CCCCeEEEEChH
Confidence 55555544 344333322 223455555554
No 266
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=26.54 E-value=5e+02 Score=27.00 Aligned_cols=102 Identities=14% Similarity=0.023 Sum_probs=62.8
Q ss_pred CCCCceeeecccCCCCCCceEe-----eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchh-HHHHHHHHHhcCCEEe
Q 008787 56 PGNRMLGWRPFVDGKFGPYVWK-----TYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQ-WVEAMEACNALSLICV 129 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~~~-----Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v 129 (553)
++.++++.. ..+.+|..+.+ |+..+...... .....++.+++++....+-... .....+..+..|+..+
T Consensus 151 ~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~ 225 (509)
T PRK12406 151 VPQPQSMIY--TSGTTGHPKGVRRAAPTPEQAAAAEQM---RALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLV 225 (509)
T ss_pred CCCceEEEE--CCCCCCCCceEEEechhHHHHHHHHHh---hhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEE
Confidence 455554443 15667766655 23333222222 2223478899988877664322 1223344566787776
Q ss_pred eCCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 130 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 130 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
.. +..+++.+..+++..++.+++..+.....+.
T Consensus 226 ~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 258 (509)
T PRK12406 226 LQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLL 258 (509)
T ss_pred Ec-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHH
Confidence 55 4568899999999999999998887765554
No 267
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=26.38 E-value=4.8e+02 Score=24.96 Aligned_cols=65 Identities=8% Similarity=0.050 Sum_probs=46.4
Q ss_pred HHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchh
Q 008787 93 LRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK 158 (553)
Q Consensus 93 L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~ 158 (553)
+.+.| +++|+.|.. ...+-.-....++|.++|..+..+-|...+..-...++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 33444 345666544 555556666777888899988877777666677788999999999988653
No 268
>PRK06381 threonine synthase; Validated
Probab=26.27 E-value=2.3e+02 Score=27.69 Aligned_cols=53 Identities=9% Similarity=-0.026 Sum_probs=40.1
Q ss_pred EEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 105 GIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 105 ~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
.+....+-.-..+.++|...|..+..+-|...+..-...++..++++++++..
T Consensus 66 lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 66 ITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 34455566666677888899988877766666666677899999999999865
No 269
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=26.20 E-value=45 Score=24.82 Aligned_cols=70 Identities=16% Similarity=0.303 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhh
Q 008787 81 EVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVK 160 (553)
Q Consensus 81 el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 160 (553)
++...++..++.|+.-|+.|. |.++.|.-++++..- ..-.+|.. .+.++..+.++|++|.+.+.
T Consensus 9 ~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~~-~l~~~~lk-------------vy~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSEE-VLEVSGLK-------------VYVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEE-------------EEE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHHH-HHHhhCce-------------EEEHHhcCCceEEEchHHhc
Confidence 456678888999999999887 888888877776440 00112211 13467789999999999888
Q ss_pred hhhccc
Q 008787 161 ELLSPD 166 (553)
Q Consensus 161 ~~~~~~ 166 (553)
.+..+.
T Consensus 73 ~~~~as 78 (85)
T PF08967_consen 73 QLKKAS 78 (85)
T ss_dssp TSTT-E
T ss_pred cccccc
Confidence 775544
No 270
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=25.95 E-value=4.9e+02 Score=23.37 Aligned_cols=77 Identities=22% Similarity=0.299 Sum_probs=0.0
Q ss_pred HHHHHHH-HHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEEeech------HHHHHHHHHHHHHHHhhchHHHHHHHH
Q 008787 277 HILDRVI-EEYFFRRGASVGYYHG--DLNALRDDLMELKPTLLAGVP------RVFEKIHEGIKKALEELRPLRRRIFDA 347 (553)
Q Consensus 277 ~~~g~~~-~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l~~~p------~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (553)
|..|..+ ....-..|-.++.... .++.+.+.+.+.+|+++..+- ..+..+++.+++.
T Consensus 95 H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~-------------- 160 (201)
T cd02070 95 HDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEA-------------- 160 (201)
T ss_pred chHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHC--------------
Q ss_pred HHHHHHHHHhccCCcCCcchHHHHHHHHHHHHHhCCce---eEEEEcCCCCCHHHHHHH
Q 008787 348 LYKYKLAWMNMGYKQREASPLADLLAFRKVKARLGGRL---RLVISGGAPLSTEVEEFL 403 (553)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---r~i~~gG~~l~~~~~~~~ 403 (553)
.. -.++.||.+++.+..+.+
T Consensus 161 ------------------------------------~~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 161 ------------------------------------GLRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred ------------------------------------CCCcCCeEEEECCcCCHHHHHHc
No 271
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=25.93 E-value=3.6e+02 Score=28.55 Aligned_cols=85 Identities=11% Similarity=0.058 Sum_probs=62.9
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|+..+...+..+...+... ++..++++...++-..- .....+.++..|+..+..+. ..+.+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~--gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSR--GLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 4689999988888877766443 57788988877666532 23345667888988876654 7889999999999999
Q ss_pred EeechHHHHH
Q 008787 316 LAGVPRVFEK 325 (553)
Q Consensus 316 l~~~p~~~~~ 325 (553)
++........
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 9887655443
No 272
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=24.94 E-value=3.1e+02 Score=28.25 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=31.7
Q ss_pred CCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCC-----CChhHHHHHHhhcCceEEEE
Q 008787 97 GAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDT-----LGPGAVNFILDHAEIDFVFV 154 (553)
Q Consensus 97 gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~i~~ 154 (553)
++++||.|++-.+.. .....++...|+.+++++.. .+.+.+...+.. +.++|+.
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~ 165 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMI 165 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEE
Confidence 778888877655443 33445556678887766532 245566666543 4444444
No 273
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=24.40 E-value=91 Score=17.69 Aligned_cols=18 Identities=11% Similarity=0.320 Sum_probs=14.6
Q ss_pred EccCCcEEEEecccCcee
Q 008787 503 ILPNGVVKIIDRKKNLIK 520 (553)
Q Consensus 503 ~~~dG~l~~~GR~~d~i~ 520 (553)
++++|.+++..+.+..|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 348999999998887775
No 274
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=24.33 E-value=6.2e+02 Score=24.06 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=68.3
Q ss_pred HHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcC
Q 008787 46 DIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALS 125 (553)
Q Consensus 46 ~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G 125 (553)
..++...++-|+.-++..- |...-.+-.+|=.++.+++.++..+|.++++ .+.++.-|+...++.-.-=.+..
T Consensus 19 sVlrei~~~LP~e~~iY~~---D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~i----k~lVIACNTASa~al~~LR~~~~ 91 (269)
T COG0796 19 SVLREIRRQLPDEDIIYVG---DTARFPYGEKSEEEIRERTLEIVDFLLERGI----KALVIACNTASAVALEDLREKFD 91 (269)
T ss_pred HHHHHHHHHCCCCcEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHcCC----CEEEEecchHHHHHHHHHHHhCC
Confidence 3455556778998888877 7777777788999999999999999999864 47777777776665544444445
Q ss_pred CEEeeCCCCCChhHHHHHHhhcCceEEEEcchhh
Q 008787 126 LICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKV 159 (553)
Q Consensus 126 ~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 159 (553)
..++-+-|...+.. ...+.+...++++..+.
T Consensus 92 iPVvGviPaik~A~---~~t~~~~IgViaT~~Tv 122 (269)
T COG0796 92 IPVVGVIPAIKPAV---ALTRNGRIGVIATPATV 122 (269)
T ss_pred CCEEEeccchHHHH---HhccCCeEEEEeccchh
Confidence 55554445443321 22233344555555443
No 275
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=24.26 E-value=9.1e+02 Score=25.96 Aligned_cols=103 Identities=15% Similarity=0.036 Sum_probs=70.6
Q ss_pred CCCeEEEEec--CCCCCCCceEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEE
Q 008787 219 PFNICTIMYT--SGTSGDPKGVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGY 296 (553)
Q Consensus 219 ~~~~~~i~~T--SGtTG~pK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~ 296 (553)
++.++++... .+++|. ...+|...+...+..+...+.. .+.++|++...++-.. ..+...+.++..|+..+.
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~---~~~~gd~V~l~~~n~~-e~~~~~lA~~~aG~v~vp 121 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ---VAGPGDRVAILAPQGI-DYVAGFFAAIKAGTIAVP 121 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH---hcCCCCEEEEECCCCh-hHHHHHHHHHHcCceeEe
Confidence 4566655432 112232 3468999999888888777743 2678899888887764 233346667888888765
Q ss_pred e-cC--C--hHHHHHHhhhhcCcEEeechHHHHHHH
Q 008787 297 Y-HG--D--LNALRDDLMELKPTLLAGVPRVFEKIH 327 (553)
Q Consensus 297 ~-~~--~--~~~~~~~i~~~~~t~l~~~p~~~~~l~ 327 (553)
+ +. . ++.+...++..++..++.....+..+.
T Consensus 122 l~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 157 (612)
T PRK12476 122 LFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVE 157 (612)
T ss_pred cCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHH
Confidence 4 32 2 678999999999999999877665543
No 276
>PRK13390 acyl-CoA synthetase; Provisional
Probab=24.24 E-value=7.1e+02 Score=25.80 Aligned_cols=82 Identities=9% Similarity=-0.036 Sum_probs=60.4
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
-.+|...+...+..+...+... ++..+|++....+-.. -.+...+.++..|+..+..+. .++.+...++..++..
T Consensus 23 ~~lTy~el~~~~~~la~~L~~~--gv~~gd~V~i~~~n~~-~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~ 99 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYDA--GLRTGDVVALLSDNSP-EALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARV 99 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcE
Confidence 3589999988888887776433 5778898888776654 223346667888888776654 7888999999999998
Q ss_pred EeechHH
Q 008787 316 LAGVPRV 322 (553)
Q Consensus 316 l~~~p~~ 322 (553)
++.....
T Consensus 100 ~i~~~~~ 106 (501)
T PRK13390 100 LVASAAL 106 (501)
T ss_pred EEEcchh
Confidence 8876543
No 277
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=24.07 E-value=6.8e+02 Score=26.51 Aligned_cols=105 Identities=12% Similarity=-0.008 Sum_probs=64.6
Q ss_pred CCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcC------CCCCCEEEEEeCCch---hHHHHHHHHHhcC
Q 008787 57 GNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASG------AEPGCRVGIYGANCP---QWVEAMEACNALS 125 (553)
Q Consensus 57 ~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~g------l~~gd~V~l~~~n~~---~~~~~~lA~~~~G 125 (553)
+.++++.. ..+.+|..+ .+|+..+...+..+...+...+ +..++.+.+..-+-. .+....+.++..|
T Consensus 207 ~~~a~i~~--TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g 284 (562)
T PRK12492 207 DDIAVLQY--TGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSG 284 (562)
T ss_pred CCeEEEEe--CCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcC
Confidence 34454432 156666655 6678888877777777765433 456665544322221 2223345666778
Q ss_pred CEEeeCCCCCChhHHHHHHhhcCceEEEEcchhhhhhh
Q 008787 126 LICVPLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 126 ~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
...+..........+...++..++..++..+.....+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 322 (562)
T PRK12492 285 NHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALM 322 (562)
T ss_pred ceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHH
Confidence 76665554456677778899999999888776665543
No 278
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=24.01 E-value=5.4e+02 Score=27.24 Aligned_cols=107 Identities=14% Similarity=0.035 Sum_probs=63.2
Q ss_pred CCCCceeeecccCCCCCCce--EeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEeCCchhHH---HHHHHHHhcCCEEe
Q 008787 56 PGNRMLGWRPFVDGKFGPYV--WKTYKEVYEEVLQIVSALRASG-AEPGCRVGIYGANCPQWV---EAMEACNALSLICV 129 (553)
Q Consensus 56 p~~~al~~~~~~d~~~~~~~--~~Ty~el~~~v~~la~~L~~~g-l~~gd~V~l~~~n~~~~~---~~~lA~~~~G~~~v 129 (553)
++.++++.. ..+.+|..+ .+|+..+...+......+.-.+ +.+++.+.+......... ...+..+..|...+
T Consensus 207 ~~~~~~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 284 (560)
T PRK08751 207 PDDIAFLQY--TGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNH 284 (560)
T ss_pred cccEEEEEc--CCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEE
Confidence 355554432 145566554 4577777777766666554333 677776655433322211 12344455666555
Q ss_pred eCCCCCChhHHHHHHhhcCceEEEEcchhhhhhhc
Q 008787 130 PLYDTLGPGAVNFILDHAEIDFVFVQDKKVKELLS 164 (553)
Q Consensus 130 ~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~ 164 (553)
.+........+...++..++.++.........+.+
T Consensus 285 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 319 (560)
T PRK08751 285 LISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLN 319 (560)
T ss_pred EecCcCCHHHHHHHHHhcceeEecChHHHHHHHHc
Confidence 55545567788888999999988877766655543
No 279
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=23.72 E-value=4.4e+02 Score=22.05 Aligned_cols=54 Identities=9% Similarity=-0.126 Sum_probs=41.8
Q ss_pred EEEEEeCCc----hhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 103 RVGIYGANC----PQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 103 ~V~l~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
+|.+.+..+ .-..+....+-..|.-++-+-...+++++.....+.+|++|..+.
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 455544433 334455666778999999999999999999999999999988775
No 280
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=23.55 E-value=9.9e+02 Score=26.12 Aligned_cols=86 Identities=7% Similarity=-0.176 Sum_probs=61.6
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... ++..+|++...++-..- -....+.++..|+..+-... .++.+...++..++++
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 151 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRAS--GAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDF 151 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCE
Confidence 3468888888887777666433 67888998877776532 22345567788887765544 8899999999999999
Q ss_pred EeechHHHHHH
Q 008787 316 LAGVPRVFEKI 326 (553)
Q Consensus 316 l~~~p~~~~~l 326 (553)
++.....+..+
T Consensus 152 v~~~~~~~~~~ 162 (660)
T PLN02430 152 VFVQDKKIKEL 162 (660)
T ss_pred EEECHHHHHHH
Confidence 99876544433
No 281
>PRK07476 eutB threonine dehydratase; Provisional
Probab=23.32 E-value=4.5e+02 Score=25.68 Aligned_cols=49 Identities=12% Similarity=-0.008 Sum_probs=37.5
Q ss_pred CCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 109 ANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 109 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
..+-.-....++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 4444455667788889988877777766677778889999999998864
No 282
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.14 E-value=8.4e+02 Score=25.13 Aligned_cols=112 Identities=10% Similarity=-0.089 Sum_probs=71.5
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhH-HHHHHHHHhcCCEEeeCCCC--CChhHHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQW-VEAMEACNALSLICVPLYDT--LGPGAVNF 142 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~l~~ 142 (553)
.+.+|..+ .+|+..+...+...+.. .++..++++....|-+... +..+++.+..|...+..+.. .++..+..
T Consensus 152 SGTTG~PK~v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~ 228 (503)
T PRK04813 152 SGTTGKPKGVQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFE 228 (503)
T ss_pred CCCCCCCcEEEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHH
Confidence 45556554 67888877665554443 4678888887777665433 34566788899988877653 35677888
Q ss_pred HHhhcCceEEEEcchhhhhhhcc---ccccccCccEEEEecCC
Q 008787 143 ILDHAEIDFVFVQDKKVKELLSP---DCRSAQRLRVMVCFTSL 182 (553)
Q Consensus 143 ~l~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 182 (553)
.++..++..+...+.....+... .......++.++.-+..
T Consensus 229 ~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~ 271 (503)
T PRK04813 229 TLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEE 271 (503)
T ss_pred HHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCc
Confidence 88999999888877655443221 12233455555555543
No 283
>PRK06178 acyl-CoA synthetase; Validated
Probab=22.90 E-value=4.3e+02 Score=28.07 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=63.6
Q ss_pred EeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcEE
Q 008787 239 VLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTLL 316 (553)
Q Consensus 239 ~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~l 316 (553)
.+|...+...+..+...+... ++..++++....+-..- .....+.++..|+..+..+. ....+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQR--GVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 588888888877777666432 56788888877766543 23446667788888776554 78889999999999999
Q ss_pred eechHHHHHHH
Q 008787 317 AGVPRVFEKIH 327 (553)
Q Consensus 317 ~~~p~~~~~l~ 327 (553)
+..+.....+.
T Consensus 135 i~~~~~~~~l~ 145 (567)
T PRK06178 135 LALDQLAPVVE 145 (567)
T ss_pred EEccchHHHHH
Confidence 99888766554
No 284
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=22.85 E-value=2.5e+02 Score=25.26 Aligned_cols=56 Identities=11% Similarity=0.029 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 81 EVYEEVLQIVSALRA-SGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 81 el~~~v~~la~~L~~-~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
...++.+.++..+.+ .+++++|.+.+++.+ |..++|+ ++....+.-+|.+|..+.-
T Consensus 84 s~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 84 SYLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTSL 140 (243)
T ss_pred chhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEehh
Confidence 446778888887664 499999988888764 4445555 3455666777877766554
No 285
>PRK07867 acyl-CoA synthetase; Validated
Probab=22.74 E-value=4.6e+02 Score=27.62 Aligned_cols=86 Identities=10% Similarity=-0.181 Sum_probs=62.1
Q ss_pred EEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--ChHHHHHHhhhhcCcE
Q 008787 238 VVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--DLNALRDDLMELKPTL 315 (553)
Q Consensus 238 v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (553)
..+|...+...+..+...+... .+...++++...++-. .-.....+.++..|+.++..+. .++.+...+++.++..
T Consensus 27 ~~~Ty~el~~~v~~lA~~L~~~-~~~~~~~~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 104 (529)
T PRK07867 27 SFTSWREHIRGSAARAAALRAR-LDPTRPPHVGVLLDNT-PEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQL 104 (529)
T ss_pred cEEeHHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCC-HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeE
Confidence 3589999988888877776432 1345667776666643 2333446677888999886655 7889999999999999
Q ss_pred EeechHHHHH
Q 008787 316 LAGVPRVFEK 325 (553)
Q Consensus 316 l~~~p~~~~~ 325 (553)
++........
T Consensus 105 li~~~~~~~~ 114 (529)
T PRK07867 105 VLTESAHAEL 114 (529)
T ss_pred EEECHhHHHH
Confidence 9998776553
No 286
>PLN02356 phosphateglycerate kinase
Probab=22.73 E-value=5.7e+02 Score=26.21 Aligned_cols=67 Identities=18% Similarity=0.098 Sum_probs=45.2
Q ss_pred HHHHHHHcC-CCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcc
Q 008787 89 IVSALRASG-AEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQD 156 (553)
Q Consensus 89 la~~L~~~g-l~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~ 156 (553)
+-..+.+.| +++|..|. .....-.-+...++|...|..++.+-|...+.+-..+++..+++++.++.
T Consensus 91 ~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 91 IIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 333344444 34776654 33334446667788888998887776766666667899999999998853
No 287
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=22.67 E-value=1.4e+02 Score=28.51 Aligned_cols=72 Identities=18% Similarity=0.113 Sum_probs=40.0
Q ss_pred ceeEEEEcCCCC--CHHHHHHHHHhcCCceEeeeccccCCCceeeccCCCccccCccCCCCCCeeEEEeecCCCCCC
Q 008787 384 RLRLVISGGAPL--STEVEEFLRVTCCAFLVQGYGLTETCGPTTVCFPDEMCMVGTAGPVSVYSELRLEEVPEMGYS 458 (553)
Q Consensus 384 ~lr~i~~gG~~l--~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~G~~~~~~~v~i~~~~~~~~~ 458 (553)
+|-.-++|++.- ..++.+++|..|.-..-+.|=++++-+......+.... +.+=..-.|...++++ +++...
T Consensus 70 ~lgL~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t~g~~~--GiVLiaGTgs~crl~~-~DGs~~ 143 (336)
T KOG1794|consen 70 SLGLGLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAATPGGEG--GIVLIAGTGSNCRLVN-PDGSEK 143 (336)
T ss_pred eeeeecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhcCCCCCC--cEEEEecCCceeEEEC-CCCCcc
Confidence 555555666543 35578888988866566688888876655554432211 1111111345566666 555433
No 288
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=22.40 E-value=1.7e+02 Score=26.14 Aligned_cols=33 Identities=24% Similarity=0.425 Sum_probs=28.9
Q ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 008787 75 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIY 107 (553)
Q Consensus 75 ~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~ 107 (553)
.-+||.++.+.+.++|..+.+.|.+|.-.|++.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 578999999999999999999999888655554
No 289
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=22.18 E-value=3.1e+02 Score=27.62 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=47.4
Q ss_pred HHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcchh
Q 008787 93 LRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDKK 158 (553)
Q Consensus 93 L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~ 158 (553)
|.+.+.++| .|+--..| ....+.+|+.++|+.+..+-|..++.-..+.++..++.+++.....
T Consensus 108 la~~~~~~g-ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 108 LAKQQKKAG-VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred HHHhhhcCc-eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 333343444 34434444 4567789999999999999999999999999999999999987654
No 290
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=22.09 E-value=3.2e+02 Score=28.35 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=35.7
Q ss_pred CCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeCC-CCCChhHHHHHHhhcCceEEEEcchh
Q 008787 99 EPGCRVGIYGANCPQWVEAMEACNALSLICVPLY-DTLGPGAVNFILDHAEIDFVFVQDKK 158 (553)
Q Consensus 99 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~i~~~~~~ 158 (553)
++||+|++=.| ++..+...+-...+..+.+|++ ....++.+...++..+++++++.+..
T Consensus 177 ~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 177 DPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 56777766544 3333444444444444444443 34677888888888888888877653
No 291
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=21.92 E-value=83 Score=23.51 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=19.6
Q ss_pred eEeeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEeCCc
Q 008787 75 VWKTYKEVYE-EVLQIVSALRASGAEPGCRVGIYGANC 111 (553)
Q Consensus 75 ~~~Ty~el~~-~v~~la~~L~~~gl~~gd~V~l~~~n~ 111 (553)
..++-.|+.+ ++.+++..|.++|+ .|-+--.+|
T Consensus 29 fslDg~efl~eri~~L~~~L~kRgv----~v~L~~~~S 62 (86)
T PF09153_consen 29 FSLDGEEFLRERISRLIEFLKKRGV----SVSLDEEPS 62 (86)
T ss_dssp EESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEeccHHHHHHHHHHHHHHHHhcCc----eeEEeecCC
Confidence 3556678888 99999999999865 454544443
No 292
>PRK12582 acyl-CoA synthetase; Provisional
Probab=21.90 E-value=3.3e+02 Score=29.47 Aligned_cols=81 Identities=10% Similarity=0.008 Sum_probs=59.4
Q ss_pred eEEeccHhHHHHHhhchhhhccccCCCCCCcEEEEecChHHHHHHHHHHHHHHcCcEEEEecC--C-----hHHHHHHhh
Q 008787 237 GVVLTHETIATFVSGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRVIEEYFFRRGASVGYYHG--D-----LNALRDDLM 309 (553)
Q Consensus 237 ~v~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~~~~~~--~-----~~~~~~~i~ 309 (553)
.-.+|...+...+..+...+... ++..+|++...++-. .-.....+.++..|+..+.... . .+.+...++
T Consensus 78 ~~~~Ty~el~~~v~~lA~~L~~~--Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~ 154 (624)
T PRK12582 78 WRKVTYGEAKRAVDALAQALLDL--GLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFD 154 (624)
T ss_pred eEEeEHHHHHHHHHHHHHHHHHc--CCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHH
Confidence 34689999988888777766433 678899998888743 3334456677888888776653 2 378999999
Q ss_pred hhcCcEEeech
Q 008787 310 ELKPTLLAGVP 320 (553)
Q Consensus 310 ~~~~t~l~~~p 320 (553)
..++..++...
T Consensus 155 ~~~~~~vi~~~ 165 (624)
T PRK12582 155 LVKPRVVFAQS 165 (624)
T ss_pred hcCCcEEEecC
Confidence 99999888754
No 293
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=21.85 E-value=2.3e+02 Score=22.66 Aligned_cols=40 Identities=13% Similarity=-0.019 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCCCEEEEEeCC-chhHHHHHHHHHhcCCE
Q 008787 88 QIVSALRASGAEPGCRVGIYGAN-CPQWVEAMEACNALSLI 127 (553)
Q Consensus 88 ~la~~L~~~gl~~gd~V~l~~~n-~~~~~~~~lA~~~~G~~ 127 (553)
.+...+.+.|+.+++.|.+++.. +.....+.+.+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 44555667788999999999988 47777777778888865
No 294
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=21.23 E-value=8.5e+02 Score=24.51 Aligned_cols=90 Identities=14% Similarity=0.055 Sum_probs=54.5
Q ss_pred CCCCCCce--EeeHHHHHHHHHHHHHHHHHcCCCC--CCEEEEEeCCch--hHHHHHHHHHhcCCEEeeCCCCCChhHHH
Q 008787 68 DGKFGPYV--WKTYKEVYEEVLQIVSALRASGAEP--GCRVGIYGANCP--QWVEAMEACNALSLICVPLYDTLGPGAVN 141 (553)
Q Consensus 68 d~~~~~~~--~~Ty~el~~~v~~la~~L~~~gl~~--gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 141 (553)
.|.+|..| .+|+..+...+..++..+ ++.. .|++..++|-.- -+...++..+..|+.++.... .++..+-
T Consensus 104 SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-~~~~~~l 179 (386)
T TIGR02372 104 SGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA-APASGIM 179 (386)
T ss_pred CCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC-CChHHHH
Confidence 56666666 558888888777776654 4433 356766666552 233455667778998876653 4554444
Q ss_pred HHHhhcCceEEEEcchhhhhhh
Q 008787 142 FILDHAEIDFVFVQDKKVKELL 163 (553)
Q Consensus 142 ~~l~~~~~~~i~~~~~~~~~~~ 163 (553)
..++.. .+++..+.....+.
T Consensus 180 ~~i~~~--t~~~~~P~~l~~l~ 199 (386)
T TIGR02372 180 RHARPG--DLIVGTPFIWEQLA 199 (386)
T ss_pred HhhccC--CEEEECcHHHHHHH
Confidence 444322 56666666665553
No 295
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=21.19 E-value=6.8e+02 Score=23.66 Aligned_cols=87 Identities=17% Similarity=0.167 Sum_probs=45.5
Q ss_pred cHHHHHHHHHHcCCCCCceeeecccCCCCCCceEeeHHHHH--HHHHHHHHHHHHcCCCCCCEEEEEeCCc--hhHHHHH
Q 008787 43 TAWDIFSMSVQKYPGNRMLGWRPFVDGKFGPYVWKTYKEVY--EEVLQIVSALRASGAEPGCRVGIYGANC--PQWVEAM 118 (553)
Q Consensus 43 ~l~~~l~~~a~~~p~~~al~~~~~~d~~~~~~~~~Ty~el~--~~v~~la~~L~~~gl~~gd~V~l~~~n~--~~~~~~~ 118 (553)
.+.+++.+.-+.+++.+.+. +||.... .-.+++...+.+.|+ =+++.|+- -+.-...
T Consensus 73 ~~~~~~~~ir~~~~~~pivl--------------m~Y~N~i~~~G~e~F~~~~~~aGv-----dGlIipDLP~ee~~~~~ 133 (259)
T PF00290_consen 73 KIFELVKEIRKKEPDIPIVL--------------MTYYNPIFQYGIERFFKEAKEAGV-----DGLIIPDLPPEESEELR 133 (259)
T ss_dssp HHHHHHHHHHHHCTSSEEEE--------------EE-HHHHHHH-HHHHHHHHHHHTE-----EEEEETTSBGGGHHHHH
T ss_pred HHHHHHHHHhccCCCCCEEE--------------EeeccHHhccchHHHHHHHHHcCC-----CEEEEcCCChHHHHHHH
Confidence 34444444444667766653 5666643 236777777777765 23444432 2233334
Q ss_pred HHHHhcCCEEeeC-CCCCChhHHHHHHhhcC
Q 008787 119 EACNALSLICVPL-YDTLGPGAVNFILDHAE 148 (553)
Q Consensus 119 lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~ 148 (553)
=+|.+.|..++++ .|..+.+++..+.+.+.
T Consensus 134 ~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~ 164 (259)
T PF00290_consen 134 EAAKKHGLDLIPLVAPTTPEERIKKIAKQAS 164 (259)
T ss_dssp HHHHHTT-EEEEEEETTS-HHHHHHHHHH-S
T ss_pred HHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 4566677776665 45566666666655443
No 296
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=21.17 E-value=7.5e+02 Score=25.28 Aligned_cols=83 Identities=14% Similarity=-0.105 Sum_probs=59.7
Q ss_pred EeeHHHHHHHH-HHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeC--CCCCChhHHHHHHhhcCceEE
Q 008787 76 WKTYKEVYEEV-LQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL--YDTLGPGAVNFILDHAEIDFV 152 (553)
Q Consensus 76 ~~Ty~el~~~v-~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~i 152 (553)
++-|.+-.--+ ..+...+.+...-+|-+|+.+.+=..+..+.+..+..+|+-+... +|..+.++....|...++.++
T Consensus 10 ~i~w~~~~mp~l~~~~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~ 89 (413)
T cd00401 10 EIEIAENEMPGLMAIREEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVF 89 (413)
T ss_pred HHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEE
Confidence 44554433332 233445555555679999999999999999999999999976544 567788889999998888876
Q ss_pred EEcchh
Q 008787 153 FVQDKK 158 (553)
Q Consensus 153 ~~~~~~ 158 (553)
-.....
T Consensus 90 a~~~~~ 95 (413)
T cd00401 90 AWKGET 95 (413)
T ss_pred EEcCCC
Confidence 544443
No 297
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=20.61 E-value=3.4e+02 Score=26.15 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=49.2
Q ss_pred CCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEee-CCCCCChhHHHHHHhhcCceEEEEcchhhh
Q 008787 97 GAEPGCRVGIYGANCPQWVEAMEACNALSLICVP-LYDTLGPGAVNFILDHAEIDFVFVQDKKVK 160 (553)
Q Consensus 97 gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~ 160 (553)
.+++||.|+=-..||.---+.+-=|-..|+.-+- +..+-..+++...|...+|+-+|++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 6799999888888886655555556667765443 456667899999999999999999887653
No 298
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=20.53 E-value=3.7e+02 Score=21.19 Aligned_cols=50 Identities=18% Similarity=0.102 Sum_probs=35.8
Q ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCEEeeC
Q 008787 75 VWKTYKEVYEEVLQIVSALRASGAEPGCRVGIYGANCPQWVEAMEACNALSLICVPL 131 (553)
Q Consensus 75 ~~~Ty~el~~~v~~la~~L~~~gl~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 131 (553)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+...|...+-.
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 4566666543 3445556667889999999888888888888899865533
No 299
>PLN02409 serine--glyoxylate aminotransaminase
Probab=20.44 E-value=5.6e+02 Score=25.89 Aligned_cols=74 Identities=8% Similarity=-0.072 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCEEEEEeCCchhHHHH-HHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEc
Q 008787 81 EVYEEVLQIVSALRAS-GAEPGCRVGIYGANCPQWVEA-MEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQ 155 (553)
Q Consensus 81 el~~~v~~la~~L~~~-gl~~gd~V~l~~~n~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~ 155 (553)
++.+..+++...|.+. |...++. .++..++...+.+ +..++..|-.++..++.........+++..++++..+.
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~-vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTP-FIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 3444455555555444 5554444 4444455444433 34455667666666655544445566667777766654
No 300
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.39 E-value=4.5e+02 Score=20.96 Aligned_cols=41 Identities=10% Similarity=0.033 Sum_probs=33.3
Q ss_pred HHHHHHhcCCEEeeCCCCCChhHHHHHHhhcCceEEEEcch
Q 008787 117 AMEACNALSLICVPLYDTLGPGAVNFILDHAEIDFVFVQDK 157 (553)
Q Consensus 117 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~ 157 (553)
....+-..|.-++-+.+..+.+++...+.+.++++|..+..
T Consensus 19 ~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 19 VARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 34444558999989999999999999999999998877643
Done!