Query 008791
Match_columns 553
No_of_seqs 360 out of 1629
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 11:47:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.4 1.9E-12 6.5E-17 102.1 8.9 66 11-77 2-67 (68)
2 3dxs_X Copper-transporting ATP 99.3 8.9E-12 3.1E-16 98.6 9.0 66 11-76 2-71 (74)
3 4a4j_A Pacszia, cation-transpo 99.3 1.7E-11 5.7E-16 95.6 10.4 65 11-75 2-69 (69)
4 1cc8_A Protein (metallochapero 99.3 1.2E-11 3.9E-16 98.1 9.5 66 11-76 5-71 (73)
5 3fry_A Probable copper-exporti 99.2 3.4E-11 1.1E-15 96.0 9.0 65 11-77 5-70 (73)
6 2crl_A Copper chaperone for su 99.2 4.2E-11 1.5E-15 102.1 9.1 70 11-80 19-88 (98)
7 2xmw_A PACS-N, cation-transpor 99.1 4E-10 1.4E-14 86.3 10.3 65 11-75 3-70 (71)
8 1aw0_A Menkes copper-transport 99.1 4E-10 1.4E-14 86.8 9.0 65 11-75 3-71 (72)
9 1mwy_A ZNTA; open-faced beta-s 99.1 7.6E-10 2.6E-14 86.4 10.6 66 11-76 3-70 (73)
10 3cjk_B Copper-transporting ATP 99.1 7.1E-10 2.4E-14 86.6 10.3 66 11-76 2-71 (75)
11 2xmm_A SSR2857 protein, ATX1; 99.1 1.8E-10 6.3E-15 86.5 6.6 61 12-72 2-63 (64)
12 2l3m_A Copper-ION-binding prot 99.1 6.8E-10 2.3E-14 85.4 9.6 62 11-72 5-70 (71)
13 1osd_A MERP, hypothetical prot 99.1 6.1E-10 2.1E-14 85.7 9.2 65 11-75 3-71 (72)
14 2roe_A Heavy metal binding pro 99.1 2E-10 7E-15 88.2 6.5 62 14-75 3-65 (66)
15 1y3j_A Copper-transporting ATP 99.1 3.3E-10 1.1E-14 89.4 7.7 67 11-77 3-73 (77)
16 2g9o_A Copper-transporting ATP 99.0 6.6E-10 2.3E-14 92.2 9.2 70 11-80 3-79 (90)
17 2qif_A Copper chaperone COPZ; 99.0 1.2E-09 4.1E-14 82.0 9.7 62 11-72 2-67 (69)
18 1kvi_A Copper-transporting ATP 99.0 6E-10 2E-14 88.1 8.1 66 11-76 8-77 (79)
19 1opz_A Potential copper-transp 99.0 1.3E-09 4.3E-14 84.3 9.2 65 11-75 6-74 (76)
20 1yjr_A Copper-transporting ATP 99.0 9.3E-10 3.2E-14 85.3 8.4 66 11-76 4-73 (75)
21 1q8l_A Copper-transporting ATP 99.0 8.3E-10 2.8E-14 89.5 8.4 68 11-78 9-80 (84)
22 2kkh_A Putative heavy metal tr 99.0 1.8E-09 6E-14 89.8 10.5 74 8-82 14-91 (95)
23 2kt2_A Mercuric reductase; nme 99.0 8.8E-10 3E-14 84.5 7.8 62 14-75 3-67 (69)
24 1fvq_A Copper-transporting ATP 99.0 1.3E-09 4.4E-14 83.8 8.7 65 12-76 3-70 (72)
25 1cpz_A Protein (COPZ); copper 99.0 1.3E-09 4.3E-14 82.8 8.4 62 14-75 3-68 (68)
26 2k2p_A Uncharacterized protein 99.0 5.6E-10 1.9E-14 92.6 6.8 62 11-72 22-84 (85)
27 1jww_A Potential copper-transp 99.0 1.7E-09 5.9E-14 85.0 8.9 67 11-77 3-73 (80)
28 1yg0_A COP associated protein; 98.9 1.7E-09 5.8E-14 81.6 7.5 61 12-72 2-65 (66)
29 2ldi_A Zinc-transporting ATPas 98.9 1.8E-09 6E-14 82.0 6.9 63 11-73 3-69 (71)
30 1qup_A Superoxide dismutase 1 98.9 3.6E-09 1.2E-13 103.7 10.2 71 11-81 6-76 (222)
31 2kyz_A Heavy metal binding pro 98.9 1.6E-09 5.6E-14 83.5 6.0 62 12-75 2-64 (67)
32 2ofg_X Zinc-transporting ATPas 98.9 4.7E-09 1.6E-13 90.7 9.5 65 11-75 8-76 (111)
33 1p6t_A Potential copper-transp 98.9 4.5E-09 1.6E-13 93.1 8.9 69 11-79 74-146 (151)
34 2ew9_A Copper-transporting ATP 98.9 5.5E-09 1.9E-13 92.0 9.0 65 11-75 80-148 (149)
35 1jk9_B CCS, copper chaperone f 98.8 8.2E-09 2.8E-13 102.9 8.5 70 12-81 8-77 (249)
36 2rop_A Copper-transporting ATP 98.8 1.6E-08 5.5E-13 95.3 9.5 69 11-79 122-194 (202)
37 2aj0_A Probable cadmium-transp 98.8 1.2E-08 4.2E-13 79.2 6.7 60 11-74 3-63 (71)
38 2ew9_A Copper-transporting ATP 98.7 4.1E-08 1.4E-12 86.4 8.8 66 11-76 4-73 (149)
39 2rop_A Copper-transporting ATP 98.4 2.8E-07 9.4E-12 86.8 7.6 64 11-74 20-90 (202)
40 1p6t_A Potential copper-transp 98.4 9.4E-07 3.2E-11 78.1 8.9 62 11-72 6-71 (151)
41 3j09_A COPA, copper-exporting 98.3 1.6E-06 5.6E-11 97.7 9.4 65 12-76 3-71 (723)
42 2x3d_A SSO6206; unknown functi 85.1 4.4 0.00015 34.9 8.7 64 11-75 5-78 (96)
43 3bpd_A Uncharacterized protein 84.5 3.8 0.00013 35.5 8.1 64 11-75 7-79 (100)
44 2raq_A Conserved protein MTH88 83.0 5.5 0.00019 34.4 8.4 64 11-75 7-79 (97)
45 3cq1_A Putative uncharacterize 76.0 2.6 8.9E-05 35.8 4.3 35 12-46 42-82 (103)
46 2jsx_A Protein NAPD; TAT, proo 73.7 8.5 0.00029 32.7 6.9 47 22-68 16-63 (95)
47 1uwd_A Hypothetical protein TM 72.4 3.5 0.00012 34.9 4.2 35 12-46 43-83 (103)
48 4gwb_A Peptide methionine sulf 69.9 8.2 0.00028 36.3 6.4 28 22-49 9-36 (168)
49 3lvj_C Sulfurtransferase TUSA; 69.6 12 0.00042 30.4 6.8 56 12-76 10-68 (82)
50 3lno_A Putative uncharacterize 64.6 3.9 0.00013 35.1 2.9 36 12-47 45-87 (108)
51 1jdq_A TM006 protein, hypothet 63.7 18 0.00063 30.6 6.9 55 13-76 27-84 (98)
52 2nyt_A Probable C->U-editing e 60.2 13 0.00044 35.4 5.9 63 12-77 84-147 (190)
53 1ff3_A Peptide methionine sulf 55.5 19 0.00064 35.1 6.2 28 22-49 49-76 (211)
54 1fvg_A Peptide methionine sulf 53.5 22 0.00074 34.3 6.2 28 22-49 50-77 (199)
55 3v4k_A DNA DC->DU-editing enzy 52.4 34 0.0012 33.1 7.4 60 13-76 102-162 (203)
56 3bqh_A PILB, peptide methionin 51.2 23 0.00079 34.0 6.0 28 22-49 9-36 (193)
57 1je3_A EC005, hypothetical 8.6 50.6 15 0.0005 31.3 4.1 55 13-76 28-85 (97)
58 1nwa_A Peptide methionine sulf 50.3 26 0.00089 33.9 6.2 28 22-49 32-59 (203)
59 3e0m_A Peptide methionine sulf 43.3 33 0.0011 35.3 6.0 34 11-49 3-36 (313)
60 2j89_A Methionine sulfoxide re 42.3 38 0.0013 33.9 6.1 28 22-49 101-128 (261)
61 1ayz_A UBC2, ubiquitin-conjuga 41.1 6.1 0.00021 36.7 0.2 12 24-35 5-16 (169)
62 3vow_A Probable DNA DC->DU-edi 40.1 52 0.0018 31.5 6.5 54 13-76 88-149 (190)
63 2byk_A Chrac-16; nucleosome sl 39.9 6.1 0.00021 36.1 0.0 10 27-36 24-33 (140)
64 2kmw_A Uncharacterized protein 37.5 28 0.00095 31.7 4.0 18 37-54 24-42 (150)
65 3hz7_A Uncharacterized protein 35.9 35 0.0012 28.1 4.1 52 15-76 4-60 (87)
66 1owx_A Lupus LA protein, SS-B, 34.8 1E+02 0.0034 27.2 7.1 57 12-68 18-76 (121)
67 2f06_A Conserved hypothetical 33.3 1.5E+02 0.0053 25.5 8.1 59 15-73 75-136 (144)
68 2lqo_A Putative glutaredoxin R 30.0 1.5E+02 0.005 24.4 7.0 25 19-45 12-36 (92)
69 2qn6_B Translation initiation 28.5 71 0.0024 27.0 4.8 24 12-35 5-30 (93)
70 1xhj_A Nitrogen fixation prote 28.1 48 0.0016 27.9 3.6 31 12-42 39-77 (88)
71 2z51_A NIFU-like protein 2, ch 26.9 56 0.0019 30.1 4.2 33 12-44 36-76 (154)
72 1pav_A Hypothetical protein TA 26.5 25 0.00087 28.0 1.6 52 15-75 9-63 (78)
73 1qb3_A Cyclin-dependent kinase 25.5 14 0.00047 34.1 -0.2 21 48-68 37-57 (150)
74 1lu4_A Soluble secreted antige 25.2 2.4E+02 0.008 22.6 7.5 49 19-76 34-85 (136)
75 1th5_A NIFU1; iron-sulfur clus 25.2 36 0.0012 27.7 2.3 30 13-42 38-71 (74)
76 1zzo_A RV1677; thioredoxin fol 24.7 2.6E+02 0.009 22.2 7.8 43 19-70 35-80 (136)
77 2iu1_A EIF5, eukaryotic transl 24.6 21 0.00072 34.4 0.9 29 189-217 153-196 (208)
78 3erw_A Sporulation thiol-disul 24.2 2.5E+02 0.0086 22.7 7.6 51 19-75 44-99 (145)
79 2cvi_A 75AA long hypothetical 23.8 2.6E+02 0.0089 21.8 7.7 41 26-66 16-57 (83)
80 1x4e_A RNA binding motif, sing 23.0 1.4E+02 0.0046 22.9 5.3 63 14-76 7-78 (85)
81 2kmw_A Uncharacterized protein 22.7 70 0.0024 29.0 4.0 7 183-189 102-108 (150)
82 3pim_A Peptide methionine sulf 22.5 59 0.002 31.0 3.5 27 22-48 26-54 (187)
83 3l4n_A Monothiol glutaredoxin- 22.1 91 0.0031 27.2 4.5 24 11-35 14-37 (127)
84 1yz7_A Probable translation in 21.9 84 0.0029 29.8 4.5 65 12-77 90-176 (188)
85 1t1v_A SH3BGRL3, SH3 domain-bi 21.1 77 0.0026 25.3 3.5 33 12-45 3-40 (93)
86 2cpq_A FragIle X mental retard 20.7 2.9E+02 0.01 23.1 7.1 58 11-70 15-77 (91)
87 3ewl_A Uncharacterized conserv 20.1 3.1E+02 0.011 22.3 7.4 47 19-75 37-92 (142)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.36 E-value=1.9e-12 Score=102.09 Aligned_cols=66 Identities=29% Similarity=0.546 Sum_probs=62.0
Q ss_pred eEEEEEEeccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCC
Q 008791 11 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGP 77 (553)
Q Consensus 11 qtv~LkVeM~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~~ 77 (553)
.+++|+|.|+|.+|+.+|+++|++++|| +++||+.+++++|+..+++++|+++|+++||++++|++
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 5778888889999999999999999999 99999999999999888999999999999999998864
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.29 E-value=8.9e-12 Score=98.62 Aligned_cols=66 Identities=23% Similarity=0.419 Sum_probs=61.2
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~ 76 (553)
++++|.|+ |+|.+|+.+|+++|++++||.++.|++.+++++|+. .+++++|+++|+++||.+++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 67889999 999999999999999999999999999999999972 3689999999999999998875
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.29 E-value=1.7e-11 Score=95.58 Aligned_cols=65 Identities=29% Similarity=0.605 Sum_probs=60.9
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|+ |+|.+|+.+|+++|++++||.+++||+.+++++|+ ..+++++|+++|+++||+++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 57889999 99999999999999999999999999999999998 5689999999999999998864
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.29 E-value=1.2e-11 Score=98.13 Aligned_cols=66 Identities=26% Similarity=0.453 Sum_probs=62.0
Q ss_pred eEEEEEEeccchhHHHHHHHHHhcCC-CeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVNVDCDGCKQKVKKVLRKID-GVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVeM~C~sCa~KIEKaL~kl~-GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~ 76 (553)
.+++|+|+|+|.+|+.+|+++|.+++ ||.+++||+.+++++|+..+++++|+++|+++||.+++|+
T Consensus 5 ~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 5 KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred eEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 67789999999999999999999999 9999999999999999987889999999999999998764
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.22 E-value=3.4e-11 Score=95.98 Aligned_cols=65 Identities=29% Similarity=0.471 Sum_probs=61.1
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGP 77 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~~ 77 (553)
++++|.|+ |+|.+|+.+|+++|++ ++|..++|++.+++++|+.. ++++|+++|+++||.++++..
T Consensus 5 ~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 5 EKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp EEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred EEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 68899999 9999999999999999 99999999999999999966 899999999999999998764
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=4.2e-11 Score=102.05 Aligned_cols=70 Identities=27% Similarity=0.411 Sum_probs=64.3
Q ss_pred eEEEEEEeccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCCCCC
Q 008791 11 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGPQKG 80 (553)
Q Consensus 11 qtv~LkVeM~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~~~~~ 80 (553)
.+++|+|+|+|.+|+.+|+++|.++++|.+|+||+.+++++|+..+++++|+++|+++||.++++.....
T Consensus 19 ~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 19 CTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp EEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred eEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCC
Confidence 5778999999999999999999999999999999999999999878899999999999999998765443
No 7
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.12 E-value=4e-10 Score=86.31 Aligned_cols=65 Identities=26% Similarity=0.524 Sum_probs=57.8
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe--cCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG--NVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g--~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|. |+|.+|+.+|+++|.+++||.++.|++.+.+++|.. .++.++|+++|+++||.++++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 57789999 999999999999999999999999999999999872 367889999999999988754
No 8
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.08 E-value=4e-10 Score=86.77 Aligned_cols=65 Identities=29% Similarity=0.457 Sum_probs=58.8
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|+ |+|.+|+.+|+++|.++++|.++.|++.+++++|.. .++.++|+++|+++||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 57789999 999999999999999999999999999999999973 367889999999999988764
No 9
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.08 E-value=7.6e-10 Score=86.41 Aligned_cols=66 Identities=24% Similarity=0.341 Sum_probs=58.4
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEec-CCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGN-VDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~-id~eeIikaI~kaGy~Ael~~ 76 (553)
.+++|.|. |+|.+|+.+|+++|.++++|.++.|++.+.+++|... ...++|+++|+++||.+....
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~~ 70 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQ 70 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEECC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcccccc
Confidence 57789999 9999999999999999999999999999999999832 246789999999999987643
No 10
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.08 E-value=7.1e-10 Score=86.63 Aligned_cols=66 Identities=21% Similarity=0.442 Sum_probs=59.4
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~ 76 (553)
.+++|.|+ |+|.+|+.+|+++|.++++|.++.|++.+.+++|.. .++.++|+++|+++||.+.++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 56789999 999999999999999999999999999999999973 3678999999999999987653
No 11
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.08 E-value=1.8e-10 Score=86.45 Aligned_cols=61 Identities=25% Similarity=0.428 Sum_probs=56.6
Q ss_pred EEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008791 12 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 72 (553)
Q Consensus 12 tv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~A 72 (553)
+++|+|+ |+|.+|+.+|+++|.++++|.+++|++.+.+++|...++.+.|+++|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 3568898 999999999999999999999999999999999997778899999999999975
No 12
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.07 E-value=6.8e-10 Score=85.43 Aligned_cols=62 Identities=23% Similarity=0.474 Sum_probs=56.8
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCce
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHA 72 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~---g~id~eeIikaI~kaGy~A 72 (553)
.+++|.|. |+|.+|+.+|+++|.+++||..+.|++.+.+++|. ..++.++|+++|+++||.+
T Consensus 5 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 57789999 99999999999999999999999999999999987 2467899999999999975
No 13
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.06 E-value=6.1e-10 Score=85.69 Aligned_cols=65 Identities=28% Similarity=0.403 Sum_probs=58.7
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|+ |+|.+|+.+|+++|.++++|.++.|++.+++++|.. .++.++|+++|+++||.+++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 56789999 999999999999999999999999999999999872 367889999999999988754
No 14
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.06 E-value=2e-10 Score=88.21 Aligned_cols=62 Identities=35% Similarity=0.657 Sum_probs=57.1
Q ss_pred EEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008791 14 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 14 ~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~ 75 (553)
+|.|+ |+|.+|+.+|+++|.+++||.+++||+.+.+++|...+++++|+++|+++||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 57898 999999999999999999999999999999999965678899999999999998764
No 15
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.06 E-value=3.3e-10 Score=89.38 Aligned_cols=67 Identities=25% Similarity=0.545 Sum_probs=60.6
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGP 77 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~~ 77 (553)
++++|.|. |+|.+|+.+|+++|.++++|.+++|++.+.+++|.. .+++++|+++|+++||.+.++..
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 73 (77)
T 1y3j_A 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIEN 73 (77)
T ss_dssp EEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEESC
T ss_pred EEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECCc
Confidence 67889999 999999999999999999999999999999999973 36788999999999999887653
No 16
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.04 E-value=6.6e-10 Score=92.20 Aligned_cols=70 Identities=19% Similarity=0.286 Sum_probs=60.6
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHc---CCceEEcCCCCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKL---GKHAELWGPQKG 80 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~ka---Gy~Ael~~~~~~ 80 (553)
.+++|.|. |+|.+|+.+|+++|.++++|.+++|++.+.+++|+. .+++++|+++|+++ ||++.++.....
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~~ 79 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVEI 79 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC--
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCcc
Confidence 36789999 999999999999999999999999999999999972 46788999999999 599887765543
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.04 E-value=1.2e-09 Score=82.01 Aligned_cols=62 Identities=27% Similarity=0.520 Sum_probs=56.2
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCce
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHA 72 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~---g~id~eeIikaI~kaGy~A 72 (553)
.+++|.|+ |+|.+|+.+|+++|.++++|.++.|++.+.+++|. ..++.+.|+++|+++||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 46789999 99999999999999999999999999999999987 2467889999999999975
No 18
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.03 E-value=6e-10 Score=88.11 Aligned_cols=66 Identities=21% Similarity=0.442 Sum_probs=59.8
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~ 76 (553)
.+++|.|. |+|.+|+.+|+++|.++++|.+++|++.+++++|.. .++.++|+++|+++||.+.+..
T Consensus 8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 67889999 999999999999999999999999999999999972 3578899999999999987764
No 19
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.01 E-value=1.3e-09 Score=84.33 Aligned_cols=65 Identities=28% Similarity=0.551 Sum_probs=58.9
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~---g~id~eeIikaI~kaGy~Ael~ 75 (553)
.+++|+|+ |+|.+|+.+|+++|.++++|.++.|++.+.+++|. ..++.+.|+++|+++||.+.++
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 67789999 99999999999999999999999999999999987 2467889999999999988764
No 20
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.01 E-value=9.3e-10 Score=85.33 Aligned_cols=66 Identities=24% Similarity=0.392 Sum_probs=58.4
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~ 76 (553)
.+++|.|. |+|.+|+.+|+++|.+++||.++.+++.+.+++|.. .++++.|+++|+++||.+.+..
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence 46779999 999999999999999999999999999999999973 2567889999999999987653
No 21
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.01 E-value=8.3e-10 Score=89.45 Aligned_cols=68 Identities=18% Similarity=0.331 Sum_probs=60.7
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGPQ 78 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~~~ 78 (553)
.+++|.|+ |+|.+|+.+|+++|.++++|.+++|++.+++++|.. .++.++|+++|+++||.++++...
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP 80 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCc
Confidence 47789999 999999999999999999999999999999999973 367899999999999998776543
No 22
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.01 E-value=1.8e-09 Score=89.82 Aligned_cols=74 Identities=24% Similarity=0.276 Sum_probs=64.8
Q ss_pred ccceEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCCCCCCC
Q 008791 8 KLQQSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGPQKGSS 82 (553)
Q Consensus 8 km~qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~~~~~~s 82 (553)
.| .+++|.|. |+|.+|+.+|+++|.++++|..+.|++.+.+++|.. .++.+.|+++|+++||.+.++.....++
T Consensus 14 ~~-~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~ 91 (95)
T 2kkh_A 14 KL-QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGETSF 91 (95)
T ss_dssp CS-EEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCCCCS
T ss_pred ce-EEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCCccc
Confidence 35 67889999 999999999999999999999999999999999873 3578899999999999998877666544
No 23
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.00 E-value=8.8e-10 Score=84.55 Aligned_cols=62 Identities=31% Similarity=0.527 Sum_probs=55.9
Q ss_pred EEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEc
Q 008791 14 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 14 ~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~ 75 (553)
+|.|+ |+|.+|+.+|+++|.++++|.+++|++.+.+++|. ..++.++|+++|+++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 47888 99999999999999999999999999999999987 2367899999999999988754
No 24
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.00 E-value=1.3e-09 Score=83.84 Aligned_cols=65 Identities=22% Similarity=0.439 Sum_probs=59.1
Q ss_pred EEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe--cCCHHHHHHHHHHcCCceEEcC
Q 008791 12 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG--NVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 12 tv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g--~id~eeIikaI~kaGy~Ael~~ 76 (553)
+++|.|+ |+|.+|+.+|+++|.+++||.++.+++.+.+++|.. .++.+.|+++|+++||.++++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 5679999 999999999999999999999999999999999873 4678899999999999988764
No 25
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.99 E-value=1.3e-09 Score=82.77 Aligned_cols=62 Identities=24% Similarity=0.498 Sum_probs=56.2
Q ss_pred EEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008791 14 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 14 ~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~ 75 (553)
+|.|+ |+|.+|+.+|+++|.++++|.++++++.+++++|.. .++.++|+++|+++||+++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 68 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI 68 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcccC
Confidence 57898 999999999999999999999999999999999973 367899999999999998753
No 26
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.99 E-value=5.6e-10 Score=92.57 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=58.3
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCce
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHA 72 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~A 72 (553)
.+++|.|+ |+|..|+.+|+++|.++++|.+++||+.+.+++|+..+++++|+++|+++||.+
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 57789999 999999999999999999999999999999999997788999999999999975
No 27
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.98 E-value=1.7e-09 Score=85.03 Aligned_cols=67 Identities=27% Similarity=0.467 Sum_probs=60.1
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGP 77 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~~ 77 (553)
.+++|.|. |+|.+|+.+|+++|.++++|.++.|++.+.+++|.. .++.+.|+++|+++||.+.++..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 56789999 999999999999999999999999999999999872 46788999999999999887654
No 28
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.95 E-value=1.7e-09 Score=81.61 Aligned_cols=61 Identities=25% Similarity=0.461 Sum_probs=54.8
Q ss_pred EEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe--cCCHHHHHHHHHHcCCce
Q 008791 12 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG--NVDPAILIKKLEKLGKHA 72 (553)
Q Consensus 12 tv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g--~id~eeIikaI~kaGy~A 72 (553)
+++|.|+ |+|.+|+.+|+++|.++++|.++++++.+.+++|.. ..+.++|+++|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 4568888 999999999999999999999999999999999973 347889999999999975
No 29
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.93 E-value=1.8e-09 Score=82.01 Aligned_cols=63 Identities=24% Similarity=0.518 Sum_probs=56.9
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceE
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAE 73 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ae 73 (553)
.+++|.|+ |+|.+|+.+|+++|.++++|.++.|++.+.+++|.. .++.++|+++|+++||.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 56789999 999999999999999999999999999999999872 3577899999999999864
No 30
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.91 E-value=3.6e-09 Score=103.67 Aligned_cols=71 Identities=28% Similarity=0.554 Sum_probs=64.8
Q ss_pred eEEEEEEeccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCCCCCC
Q 008791 11 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGPQKGS 81 (553)
Q Consensus 11 qtv~LkVeM~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~~~~~~ 81 (553)
.+++|+|+|+|.+|+.+||++|+++++|.+++|++++++++|+..+++++|+++|+++||+++++....++
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~~ 76 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKPN 76 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCTT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCcc
Confidence 46678888999999999999999999999999999999999998789999999999999999988766554
No 31
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.90 E-value=1.6e-09 Score=83.53 Aligned_cols=62 Identities=34% Similarity=0.541 Sum_probs=54.9
Q ss_pred EEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008791 12 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 12 tv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~ 75 (553)
+++|.|+ |+|.+|+.+|+++|.++ +|.++.|++.+++++|....+ ++|+++|+++||.+.++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence 3578898 99999999999999999 999999999999999985444 88999999999987644
No 32
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.90 E-value=4.7e-09 Score=90.74 Aligned_cols=65 Identities=28% Similarity=0.489 Sum_probs=58.8
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~ 75 (553)
.+++|+|+ |+|..|+.+|+++|+++++|.+++|++.+.+++|+. .++.++|+++|+++||.+.+.
T Consensus 8 ~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 8 KTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 67889999 999999999999999999999999999999999973 367889999999999987653
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.88 E-value=4.5e-09 Score=93.13 Aligned_cols=69 Identities=28% Similarity=0.483 Sum_probs=62.0
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcCCCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWGPQK 79 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~---g~id~eeIikaI~kaGy~Ael~~~~~ 79 (553)
.+++|.|. |+|.+|+.+|+++|.+++||.+++|++.+++++|+ ..+++++|+++|+++||.+.++....
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 146 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQD 146 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCccc
Confidence 46789999 99999999999999999999999999999999997 34688999999999999998876543
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.87 E-value=5.5e-09 Score=91.98 Aligned_cols=65 Identities=25% Similarity=0.449 Sum_probs=58.9
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~ 75 (553)
.+++|+|+ |+|.+|+.+|+++|.+++||.+++|++.+++++|+. .+++++|+++|+++||.++++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 46789999 999999999999999999999999999999999972 368899999999999988754
No 35
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.80 E-value=8.2e-09 Score=102.93 Aligned_cols=70 Identities=29% Similarity=0.570 Sum_probs=63.4
Q ss_pred EEEEEEeccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCCCCCC
Q 008791 12 SCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGPQKGS 81 (553)
Q Consensus 12 tv~LkVeM~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~~~~~~ 81 (553)
+++|+|+|+|.+|+.+||++|+++++|.+++|++.+++++|+..+++++|+++|+++||.++++.....+
T Consensus 8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~~ 77 (249)
T 1jk9_B 8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKPN 77 (249)
T ss_dssp EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESSTT
T ss_pred eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCccc
Confidence 5678888999999999999999999999999999999999998789999999999999999887655443
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.78 E-value=1.6e-08 Score=95.26 Aligned_cols=69 Identities=19% Similarity=0.435 Sum_probs=59.7
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcCCCC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWGPQK 79 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~~~~ 79 (553)
.+++|+|. |+|.+|+.+|+++|.+++||.++.|++.+++++|+. .+++++|+++|+++||.+.++....
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 194 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSESC 194 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC----
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCCCC
Confidence 46789999 999999999999999999999999999999999972 4688999999999999998876543
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.76 E-value=1.2e-08 Score=79.20 Aligned_cols=60 Identities=32% Similarity=0.638 Sum_probs=51.6
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEE
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAEL 74 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael 74 (553)
.+++|.|. |+|.+|+.+|+++|.++++|.+++|++...+++|....+ +++|+++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHL 63 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccc
Confidence 46789999 999999999999999999999999999999999985543 5577888987543
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.70 E-value=4.1e-08 Score=86.38 Aligned_cols=66 Identities=26% Similarity=0.506 Sum_probs=59.6
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHcCCceEEcC
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~kaGy~Ael~~ 76 (553)
++++|.|. |+|.+|+.+|+++|.++++|.++.|++.+.+++|.. .+++++|+++|+++||.+.++.
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 77889999 999999999999999999999999999999999862 4678899999999999987654
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.45 E-value=2.8e-07 Score=86.76 Aligned_cols=64 Identities=23% Similarity=0.423 Sum_probs=56.1
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEe---cCCHHHHHHHHHHc---CCceEE
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTG---NVDPAILIKKLEKL---GKHAEL 74 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g---~id~eeIikaI~ka---Gy~Ael 74 (553)
.+++|.|. |+|.+|+.+|+++|.+++||.++.|++.+.+++|.. .++++.|+++|+++ +|.+.+
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~ 90 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSL 90 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEe
Confidence 57789999 999999999999999999999999999999999972 36788999999988 366543
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.38 E-value=9.4e-07 Score=78.12 Aligned_cols=62 Identities=29% Similarity=0.596 Sum_probs=55.5
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCce
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHA 72 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~---g~id~eeIikaI~kaGy~A 72 (553)
.+++|.|+ |+|.+|+.+|+++|.++++|.++.|++.+.+++|. ..++++.|.++|+++||.+
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 56789999 99999999999999999999999999999999886 2357888999999999965
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.26 E-value=1.6e-06 Score=97.67 Aligned_cols=65 Identities=17% Similarity=0.322 Sum_probs=58.9
Q ss_pred EEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEcC
Q 008791 12 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT---GNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 12 tv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~---g~id~eeIikaI~kaGy~Ael~~ 76 (553)
+++|+|+ |+|.+|+.+||++|++++||.+++||+.+++++|+ ..+++++|+++|+++||++....
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~~ 71 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDEQ 71 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccccc
Confidence 5689999 99999999999999999999999999999999997 34689999999999999986543
No 42
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=85.13 E-value=4.4 Score=34.94 Aligned_cols=64 Identities=22% Similarity=0.234 Sum_probs=46.7
Q ss_pred eEEEEEEe--ccchhHHHHHHHHHhcCCCeeEEEEe-----cCCcEEEE--E-ecCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN--VDCDGCKQKVKKVLRKIDGVYSTNVD-----VEQGKVTV--T-GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe--M~C~sCa~KIEKaL~kl~GV~sV~VD-----latgkVtV--~-g~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|- +|-++-. .+.++|.++++|..|.+. ..+..+.| + ..++.++|.++|++.|-.++.+
T Consensus 5 rRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 5 RRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp EEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 78888876 3666654 567789999998877654 44444444 4 4599999999999999766544
No 43
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=84.48 E-value=3.8 Score=35.50 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=45.7
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEe-----cCCcEEEE--E-ecCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVD-----VEQGKVTV--T-GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VD-----latgkVtV--~-g~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|- -+-++-. .+.++|.++++|..|.+. ..+..+.| + ..++.++|.++|++.|-.++.+
T Consensus 7 RRlVLDVlKPh~P~iv-dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSI 79 (100)
T 3bpd_A 7 RRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV 79 (100)
T ss_dssp EEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred eEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 77888876 4544443 567789999998877654 44454444 4 4599999999999999766543
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=82.99 E-value=5.5 Score=34.40 Aligned_cols=64 Identities=22% Similarity=0.240 Sum_probs=45.7
Q ss_pred eEEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEE-----ecCCcEEEEE---ecCCHHHHHHHHHHcCCceEEc
Q 008791 11 QSCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNV-----DVEQGKVTVT---GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 11 qtv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~V-----DlatgkVtV~---g~id~eeIikaI~kaGy~Ael~ 75 (553)
++++|.|- -|-++-. .+.+.|.++++|..|.+ |..+..+.|+ ..++.++|.++|++.|-.++.+
T Consensus 7 rRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI 79 (97)
T 2raq_A 7 IRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV 79 (97)
T ss_dssp EEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 78888887 4555443 56677888988876654 4556555544 4599999999999999766544
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=76.00 E-value=2.6 Score=35.76 Aligned_cols=35 Identities=26% Similarity=0.580 Sum_probs=26.0
Q ss_pred EEEEEEeccchhH------HHHHHHHHhcCCCeeEEEEecC
Q 008791 12 SCVLRVNVDCDGC------KQKVKKVLRKIDGVYSTNVDVE 46 (553)
Q Consensus 12 tv~LkVeM~C~sC------a~KIEKaL~kl~GV~sV~VDla 46 (553)
++.|.|.++|+.| ...|+++|.++++|.+|+|.+.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 3445566667666 5678999999999998887644
No 46
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=73.71 E-value=8.5 Score=32.71 Aligned_cols=47 Identities=19% Similarity=0.278 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE-ecCCHHHHHHHHHHc
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT-GNVDPAILIKKLEKL 68 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~-g~id~eeIikaI~ka 68 (553)
+.-...|.++|.++++|+...++..++++.|+ ...+.++|.+.|+++
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 44477899999999999655666667888777 445666666666543
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=72.38 E-value=3.5 Score=34.88 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=24.9
Q ss_pred EEEEEEeccchhH------HHHHHHHHhcCCCeeEEEEecC
Q 008791 12 SCVLRVNVDCDGC------KQKVKKVLRKIDGVYSTNVDVE 46 (553)
Q Consensus 12 tv~LkVeM~C~sC------a~KIEKaL~kl~GV~sV~VDla 46 (553)
++.|.|.++++.| ...|+++|.++++|.+|+|.+.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4455666555555 4568889999999998887643
No 48
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=69.86 E-value=8.2 Score=36.30 Aligned_cols=28 Identities=32% Similarity=0.596 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
..|-+-+|..+.+|+||.++.+=++.+.
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~ 36 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGD 36 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSS
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCc
Confidence 5777888999999999999998887764
No 49
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=69.57 E-value=12 Score=30.41 Aligned_cols=56 Identities=9% Similarity=0.028 Sum_probs=40.1
Q ss_pred EEEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008791 12 SCVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 12 tv~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~~ 76 (553)
.++|.+. +.|+.-+-+++++|.+++- ...++|. .....+.|.+.+++.||++....
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4455566 6999999999999999842 1223333 34566788999999999887653
No 50
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=64.65 E-value=3.9 Score=35.09 Aligned_cols=36 Identities=31% Similarity=0.471 Sum_probs=25.4
Q ss_pred EEEEEEeccchhH------HHHHHHHH-hcCCCeeEEEEecCC
Q 008791 12 SCVLRVNVDCDGC------KQKVKKVL-RKIDGVYSTNVDVEQ 47 (553)
Q Consensus 12 tv~LkVeM~C~sC------a~KIEKaL-~kl~GV~sV~VDlat 47 (553)
++.|.|.++++.| ...|+++| .+++||.+|+|.+..
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 3455566666666 56788888 899999888776543
No 51
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=63.71 E-value=18 Score=30.63 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=40.0
Q ss_pred EEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008791 13 CVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 13 v~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~~ 76 (553)
++|.+. +.|+.-+-+++++|.+++- ...++|. ...+.+.|.+.++..||.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 455555 6999999999999999742 1223333 33567889999999999987654
No 52
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=60.15 E-value=13 Score=35.43 Aligned_cols=63 Identities=17% Similarity=0.248 Sum_probs=42.2
Q ss_pred EEEEEEec-cchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcCC
Q 008791 12 SCVLRVNV-DCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWGP 77 (553)
Q Consensus 12 tv~LkVeM-~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~~ 77 (553)
.+++-|.+ -|..|+..|-.+|.+.++|..|.+-... ... ......+.++.|+++|.+++++..
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d--~~~-~~p~~~~g~~~L~~aGI~V~~~~~ 147 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRL--FMW-EEPEIQAALKKLKEAGCKLRIMKP 147 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeec--CCc-CChHHHHHHHHHHHCCCEEEEecH
Confidence 56677774 7999999999999999998766442110 000 011124677888999998887543
No 53
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=55.50 E-value=19 Score=35.08 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
..|-+-+|+.+.+|+||.++.+=++.+.
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~ 76 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGY 76 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCC
Confidence 5677777888999999999888877663
No 54
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=53.48 E-value=22 Score=34.31 Aligned_cols=28 Identities=32% Similarity=0.529 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
..|-+-+|+.+.+|+||.++.+=++.+.
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~ 77 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGY 77 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCC
Confidence 5677777888999999999888777663
No 55
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=52.42 E-value=34 Score=33.08 Aligned_cols=60 Identities=13% Similarity=0.168 Sum_probs=36.6
Q ss_pred EEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcC
Q 008791 13 CVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 13 v~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~ 76 (553)
|+.-|+ --|..|+.+|.+-|.+-+.|. .+|-.+ ++-- ......+-+..|.++|.++.+..
T Consensus 102 vTwy~SWSPC~~CA~~v~~FL~~~~~v~-L~If~a--RLY~-~~~~~~~gLr~L~~aG~~v~iM~ 162 (203)
T 3v4k_A 102 VTCFTSWSPCFSCAQEMAKFISKNKHVS-LCIKTA--RIYD-DQGRCQEGLRTLAEAGAKISIMT 162 (203)
T ss_pred EEEEEeCCChHHHHHHHHHHHhhCCCeE-EEEEEE--eecc-cCchHHHHHHHHHHCCCeEEecC
Confidence 344455 379999999999999988773 222111 1111 12234555667778887777643
No 56
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=51.17 E-value=23 Score=33.98 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
..|-+-+|..+.+|+||.++.+=++.+.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~ 36 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGN 36 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCS
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCc
Confidence 5677777888999999999888776663
No 57
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=50.60 E-value=15 Score=31.27 Aligned_cols=55 Identities=7% Similarity=-0.089 Sum_probs=38.1
Q ss_pred EEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008791 13 CVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 13 v~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~~ 76 (553)
++|.+. ..|+.-.-+++++|.+++-= ..++|. ...+.+.|.+.++..||++..+.
T Consensus 28 ~~LD~rGl~CP~PvlktkkaL~~l~~G---------e~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~e 85 (97)
T 1je3_A 28 YRLDMVGEPCPYPAVATLEAMPQLKKG---------EILEVVSDCPQSINNIPLDARNHGYTVLDIQ 85 (97)
T ss_dssp EEECSBCCSSSSSTHHHHHHTTTCCSS---------CEEEEEEBCSSSSCHHHHHHHHHTCSEEEEE
T ss_pred eEEeCCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCcchHHHHHHHHHHCCCEEEEEE
Confidence 344444 69999999999999987421 123332 33566788899999999987643
No 58
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=50.27 E-value=26 Score=33.88 Aligned_cols=28 Identities=32% Similarity=0.540 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
..|-+-+|..+.+|+||.++.|=++.+.
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~ 59 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGN 59 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCC
Confidence 5677777888999999999988887764
No 59
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=43.27 E-value=33 Score=35.27 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=27.0
Q ss_pred eEEEEEEeccchhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 11 QSCVLRVNVDCDGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 11 qtv~LkVeM~C~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
++++|. ..|-+-+|..+.+|+||.++.+=++.+.
T Consensus 3 ~~a~fa-----gGCFWg~E~~F~~l~GV~~t~~GYagG~ 36 (313)
T 3e0m_A 3 AEIYLA-----GGCFWGLEEYFSRISGVLETSVGYANGQ 36 (313)
T ss_dssp EEEEEE-----CSCHHHHHHHHTTSTTEEEEEEEEESCS
T ss_pred cEEEEe-----cCCchhhHHHHhhCCCeEEeecccCCCC
Confidence 455554 6788888999999999999988877664
No 60
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=42.34 E-value=38 Score=33.92 Aligned_cols=28 Identities=32% Similarity=0.513 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEecCCcE
Q 008791 22 DGCKQKVKKVLRKIDGVYSTNVDVEQGK 49 (553)
Q Consensus 22 ~sCa~KIEKaL~kl~GV~sV~VDlatgk 49 (553)
..|-+-+|+.+.+++||.++.|=++.+.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~ 128 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGL 128 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCC
Confidence 5777778888999999999888877664
No 61
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=41.10 E-value=6.1 Score=36.67 Aligned_cols=12 Identities=0% Similarity=0.487 Sum_probs=6.3
Q ss_pred HHHHHHHHHhcC
Q 008791 24 CKQKVKKVLRKI 35 (553)
Q Consensus 24 Ca~KIEKaL~kl 35 (553)
+..+|.+.|..|
T Consensus 5 a~~RL~kEl~~l 16 (169)
T 1ayz_A 5 ARRRLMRDFKRM 16 (169)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 445565555543
No 62
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=40.14 E-value=52 Score=31.49 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=35.6
Q ss_pred EEEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE-ec----C--CHHHHHHHHHHcCCceEEcC
Q 008791 13 CVLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT-GN----V--DPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 13 v~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~-g~----i--d~eeIikaI~kaGy~Ael~~ 76 (553)
|+.-|+ --|..||.+|.+-|.+-+.|. ++|- +. . ...+=+..|.++|..+.|-.
T Consensus 88 VTwy~SwSPC~~CA~~va~FL~~~~~v~----------L~If~aRLY~~~~~~~q~gLr~L~~~G~~v~iM~ 149 (190)
T 3vow_A 88 VTWYTSWSPCPDCAGEVAEFLARHSNVN----------LTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMD 149 (190)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHCTTEE----------EEEEEEECTTTTSHHHHHHHHHHHHHTCEEEECC
T ss_pred EEEEEeCCchHHHHHHHHHHHHhCCCeE----------EEEEEEecccccCchHHHHHHHHHHCCCcEEEeC
Confidence 444455 479999999999999888763 3332 11 1 22344666778898887744
No 63
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=39.92 E-value=6.1 Score=36.06 Aligned_cols=10 Identities=10% Similarity=0.428 Sum_probs=1.9
Q ss_pred HHHHHHhcCC
Q 008791 27 KVKKVLRKID 36 (553)
Q Consensus 27 KIEKaL~kl~ 36 (553)
+|++++..-+
T Consensus 24 RIKrIMK~dp 33 (140)
T 2byk_A 24 RVRTIMKSSM 33 (140)
T ss_dssp -----CCSSS
T ss_pred HHHHHHhcCc
Confidence 4444444333
No 64
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=37.47 E-value=28 Score=31.68 Aligned_cols=18 Identities=22% Similarity=0.322 Sum_probs=12.4
Q ss_pred CeeEEEEecC-CcEEEEEe
Q 008791 37 GVYSTNVDVE-QGKVTVTG 54 (553)
Q Consensus 37 GV~sV~VDla-tgkVtV~g 54 (553)
+|..+.|++. ..+|+|..
T Consensus 24 ~~~~v~V~~~~~~~l~~~~ 42 (150)
T 2kmw_A 24 DAKDISVKCEPQGLFSFSA 42 (150)
T ss_dssp SEEEEEECCCTTEEEEEEE
T ss_pred CCCceEEEEecCCEEEEEE
Confidence 3567788887 67777763
No 65
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=35.92 E-value=35 Score=28.14 Aligned_cols=52 Identities=27% Similarity=0.324 Sum_probs=37.9
Q ss_pred EEEe-ccchhHHHHHHHHHhcCC--CeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008791 15 LRVN-VDCDGCKQKVKKVLRKID--GVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 15 LkVe-M~C~sCa~KIEKaL~kl~--GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~~ 76 (553)
|.+. +.|+.-.-+++++|.+++ | ..++|. ...+.+.|.+.++..||.+....
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 4455 699999999999999983 3 123333 34566788999999999886543
No 66
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.80 E-value=1e+02 Score=27.15 Aligned_cols=57 Identities=9% Similarity=0.113 Sum_probs=40.7
Q ss_pred EEEEEEe-ccch-hHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHc
Q 008791 12 SCVLRVN-VDCD-GCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKL 68 (553)
Q Consensus 12 tv~LkVe-M~C~-sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~ka 68 (553)
=++|.|. +... .+...|+.+++....|..|.+.....+..|.-...+++..++|+++
T Consensus 18 G~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 18 GCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred CeEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 3567777 5444 6799999999999999999888777777777443244555555554
No 67
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=33.32 E-value=1.5e+02 Score=25.48 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=36.6
Q ss_pred EEEec-cchhHHHHHHHHHhcCCC-eeEEEEecCCcEEEEE-ecCCHHHHHHHHHHcCCceE
Q 008791 15 LRVNV-DCDGCKQKVKKVLRKIDG-VYSTNVDVEQGKVTVT-GNVDPAILIKKLEKLGKHAE 73 (553)
Q Consensus 15 LkVeM-~C~sCa~KIEKaL~kl~G-V~sV~VDlatgkVtV~-g~id~eeIikaI~kaGy~Ae 73 (553)
+-|.+ +.+....+|-++|.+..= |..+.+.....++.|. ...+.++.+++|+++||++.
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~~d~~~A~~~L~~~g~~v~ 136 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKEKKVDLL 136 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEeCCHHHHHHHHHHcCCEEe
Confidence 44454 778888888888876421 3222221133344433 44588889999999999763
No 68
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=30.05 E-value=1.5e+02 Score=24.38 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=16.0
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEec
Q 008791 19 VDCDGCKQKVKKVLRKIDGVYSTNVDV 45 (553)
Q Consensus 19 M~C~sCa~KIEKaL~kl~GV~sV~VDl 45 (553)
-.|+.|.. +++.|.+. +|.-..+|+
T Consensus 12 ~~Cp~C~~-aK~~L~~~-gi~y~~idi 36 (92)
T 2lqo_A 12 SWCGYCLR-LKTALTAN-RIAYDEVDI 36 (92)
T ss_dssp TTCSSHHH-HHHHHHHT-TCCCEEEET
T ss_pred CCCHhHHH-HHHHHHhc-CCceEEEEc
Confidence 58999984 66666653 565444443
No 69
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=28.52 E-value=71 Score=26.98 Aligned_cols=24 Identities=21% Similarity=0.213 Sum_probs=18.1
Q ss_pred EEEEEEeccchhH--HHHHHHHHhcC
Q 008791 12 SCVLRVNVDCDGC--KQKVKKVLRKI 35 (553)
Q Consensus 12 tv~LkVeM~C~sC--a~KIEKaL~kl 35 (553)
+++..|+++|..+ +.+|+++|.+.
T Consensus 5 kIra~iel~c~~~dGIe~IK~AL~~a 30 (93)
T 2qn6_B 5 KMSGLITVRTNEPLGVEKIKEVISKA 30 (93)
T ss_dssp EEEEEEEEEECCTTTHHHHHHHHHHH
T ss_pred EEEEEEEEEeCCCchHHHHHHHHHHH
Confidence 5566677888666 89999999653
No 70
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=28.13 E-value=48 Score=27.87 Aligned_cols=31 Identities=19% Similarity=0.508 Sum_probs=19.7
Q ss_pred EEEEEEeccchhHH-------HHHHHHHh-cCCCeeEEE
Q 008791 12 SCVLRVNVDCDGCK-------QKVKKVLR-KIDGVYSTN 42 (553)
Q Consensus 12 tv~LkVeM~C~sCa-------~KIEKaL~-kl~GV~sV~ 42 (553)
++.+++...|.+|. ..||++|+ .++.|..|.
T Consensus 39 ~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev~~V~ 77 (88)
T 1xhj_A 39 IVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVE 77 (88)
T ss_dssp EEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCceEEE
Confidence 45556667888883 35666666 467776554
No 71
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=26.91 E-value=56 Score=30.05 Aligned_cols=33 Identities=15% Similarity=0.360 Sum_probs=20.4
Q ss_pred EEEEEEeccchhHHH-------HHHHHHh-cCCCeeEEEEe
Q 008791 12 SCVLRVNVDCDGCKQ-------KVKKVLR-KIDGVYSTNVD 44 (553)
Q Consensus 12 tv~LkVeM~C~sCa~-------KIEKaL~-kl~GV~sV~VD 44 (553)
++.+++...|.+|.. .||+.|. .++.|..|..-
T Consensus 36 ~V~v~l~GaC~gC~ss~~Tlk~~Ie~~L~~~vpev~~V~~v 76 (154)
T 2z51_A 36 VVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEAL 76 (154)
T ss_dssp EEEEEEEHHHHTCHHHHHHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred EEEEEEECCCCCCCccHhHHHHHHHHHHHHhCCCceEEEEc
Confidence 345555568888855 4556665 56777666543
No 72
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=26.51 E-value=25 Score=27.95 Aligned_cols=52 Identities=12% Similarity=0.039 Sum_probs=36.5
Q ss_pred EEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEE--ecCCHHHHHHHHHHcCCceEEc
Q 008791 15 LRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVT--GNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 15 LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~--g~id~eeIikaI~kaGy~Ael~ 75 (553)
|.+. +.|+.-.-+++++|.+++- ...++|. ...+.+.|.+.++..||.+..+
T Consensus 9 lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~~~ 63 (78)
T 1pav_A 9 IDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELVGV 63 (78)
T ss_dssp CCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEECCC
T ss_pred EECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 4444 6999999999999998742 1223333 3345678888999999986543
No 73
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=25.48 E-value=14 Score=34.12 Aligned_cols=21 Identities=10% Similarity=0.071 Sum_probs=10.9
Q ss_pred cEEEEEecCCHHHHHHHHHHc
Q 008791 48 GKVTVTGNVDPAILIKKLEKL 68 (553)
Q Consensus 48 gkVtV~g~id~eeIikaI~ka 68 (553)
.+.+....+-+.+|++.|.+.
T Consensus 37 d~YEYRHViLPke~~k~iPk~ 57 (150)
T 1qb3_A 37 DNYEYRHVMLPKAMLKVIPSD 57 (150)
T ss_dssp SSEEEEEEECCHHHHHTSCGG
T ss_pred CceeEEEEecCHHHHhhcccc
Confidence 334444444556666666544
No 74
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=25.23 E-value=2.4e+02 Score=22.64 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=28.5
Q ss_pred ccchhHHHHH---HHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEcC
Q 008791 19 VDCDGCKQKV---KKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 19 M~C~sCa~KI---EKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~~ 76 (553)
-.|..|...+ ++...+++.|.-+.|+. ..+.+++.+.+++.++...++.
T Consensus 34 ~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~---------~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1lu4_A 34 PWCPFCNAEAPSLSQVAAANPAVTFVGIAT---------RADVGAMQSFVSKYNLNFTNLN 85 (136)
T ss_dssp TTCHHHHHHHHHHHHHHHHCTTSEEEEEEC---------SSCHHHHHHHHHHHTCCSEEEE
T ss_pred CcChhHHHHHHHHHHHHHHCCCcEEEEEEc---------CCCHHHHHHHHHHcCCCceEEE
Confidence 5899997644 33344444554444433 2356777777777776554443
No 75
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=25.17 E-value=36 Score=27.70 Aligned_cols=30 Identities=23% Similarity=0.238 Sum_probs=19.3
Q ss_pred EEEEEeccchhHH---HHHHHHHh-cCCCeeEEE
Q 008791 13 CVLRVNVDCDGCK---QKVKKVLR-KIDGVYSTN 42 (553)
Q Consensus 13 v~LkVeM~C~sCa---~KIEKaL~-kl~GV~sV~ 42 (553)
+.+++...|.+|. ..||++|+ .++.|..|.
T Consensus 38 V~v~l~GaC~gc~Tlk~gIe~~L~~~vpei~~V~ 71 (74)
T 1th5_A 38 VKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQ 71 (74)
T ss_dssp EEECCCSSSSSSSSHHHHHHHHHHHHCTTCSEEE
T ss_pred EEEEEecCCcchHHHHHHHHHHHHHHCCCCcEEE
Confidence 3444446899993 45777777 567776654
No 76
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=24.74 E-value=2.6e+02 Score=22.18 Aligned_cols=43 Identities=14% Similarity=0.061 Sum_probs=24.9
Q ss_pred ccchhHHHHH---HHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCC
Q 008791 19 VDCDGCKQKV---KKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGK 70 (553)
Q Consensus 19 M~C~sCa~KI---EKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy 70 (553)
-.|..|...+ ++...++..|.-+.|+.. .+.+.+.+.+++.++
T Consensus 35 ~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~---------~~~~~~~~~~~~~~~ 80 (136)
T 1zzo_A 35 PWCPTCQGEAPVVGQVAASHPEVTFVGVAGL---------DQVPAMQEFVNKYPV 80 (136)
T ss_dssp TTCHHHHHHHHHHHHHHHHCTTSEEEEEECS---------SCHHHHHHHHHHTTC
T ss_pred CCChhHHHHHHHHHHHHHHcCCeEEEEEeCC---------CCHHHHHHHHHHcCC
Confidence 5899997654 333344445544444432 346667777776665
No 77
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding, phosphorylation, protein biosynthesis, translation inititation; 1.8A {Homo sapiens}
Probab=24.64 E-value=21 Score=34.43 Aligned_cols=29 Identities=17% Similarity=0.322 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCCCC---------------CCCCCccccC
Q 008791 189 DDFDDEEFDDDFDEDDFDD---------------YDDEDDEEFG 217 (553)
Q Consensus 189 ~~~~dd~~ddd~ddddddd---------------ddd~ddd~~d 217 (553)
+.+++++++||+|+|++++ ..+++||++|
T Consensus 153 EAEEEs~eeeeeeed~~~e~~~~~~~~~~~~~~~~~~~~~~d~d 196 (208)
T 2iu1_A 153 EAEEESSGGEEEDEDENIEVVYSKLESVPKVETVKSDNKDDDID 196 (208)
T ss_dssp CSSCCCCCCCCCCCSCHHHHHHHHHC------------------
T ss_pred ccccccccccccccccccceeccCccCCCccccccccccccccc
No 78
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=24.25 E-value=2.5e+02 Score=22.67 Aligned_cols=51 Identities=10% Similarity=0.147 Sum_probs=28.7
Q ss_pred ccchhHHHHH---HHHHhcCC--CeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008791 19 VDCDGCKQKV---KKVLRKID--GVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 19 M~C~sCa~KI---EKaL~kl~--GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~ 75 (553)
-.|..|...+ ++...++. +|.-+.|+... ...+.+.+.+.+++.++...++
T Consensus 44 ~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~------~~~~~~~~~~~~~~~~~~~~~~ 99 (145)
T 3erw_A 44 SWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN------SEQNQQVVEDFIKANKLTFPIV 99 (145)
T ss_dssp SSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG------GSSCHHHHHHHHHHTTCCSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC------CcCCHHHHHHHHHHcCCceeEE
Confidence 5899997643 33333333 44433333221 1237788888888877765444
No 79
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=23.77 E-value=2.6e+02 Score=21.76 Aligned_cols=41 Identities=15% Similarity=0.004 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCeeEEEEecCCcEEEEE-ecCCHHHHHHHHH
Q 008791 26 QKVKKVLRKIDGVYSTNVDVEQGKVTVT-GNVDPAILIKKLE 66 (553)
Q Consensus 26 ~KIEKaL~kl~GV~sV~VDlatgkVtV~-g~id~eeIikaI~ 66 (553)
..+.++|.+++.|.++-.-.-.-.+.|. ...+.++|.+.|.
T Consensus 16 ~~~~~~l~~~peV~e~~~vtG~~D~ll~v~~~d~~~l~~~i~ 57 (83)
T 2cvi_A 16 REVMEKLLAMPEVKEAYVVYGEYDLIVKVETDTLKDLDQFIT 57 (83)
T ss_dssp HHHHHHHHTSTTEEEEEECBSSCSEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHhCCCCeeEEEEEcccCCEEEEEEECCHHHHHHHHH
Confidence 6788999999999877664444344443 3346666666554
No 80
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.03 E-value=1.4e+02 Score=22.90 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=37.3
Q ss_pred EEEEe-ccchhHHHHHHHHHhcCCCeeEEEEecCC------cEEEEE--ecCCHHHHHHHHHHcCCceEEcC
Q 008791 14 VLRVN-VDCDGCKQKVKKVLRKIDGVYSTNVDVEQ------GKVTVT--GNVDPAILIKKLEKLGKHAELWG 76 (553)
Q Consensus 14 ~LkVe-M~C~sCa~KIEKaL~kl~GV~sV~VDlat------gkVtV~--g~id~eeIikaI~kaGy~Ael~~ 76 (553)
+|-|. +........|++.+.....|.++.|-... +-+.|+ ...+.+..++.|...-+....+.
T Consensus 7 ~l~v~nlp~~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~~~ 78 (85)
T 1x4e_A 7 GLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 78 (85)
T ss_dssp EEEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred EEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHHhcCCeEeeEEEe
Confidence 45565 66666777888888888889888876542 234454 22333444444544445544443
No 81
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=22.72 E-value=70 Score=29.00 Aligned_cols=7 Identities=29% Similarity=0.378 Sum_probs=3.4
Q ss_pred CCCCCCC
Q 008791 183 KFNTIED 189 (553)
Q Consensus 183 k~~~~~~ 189 (553)
.|+.-.+
T Consensus 102 Dwdkw~d 108 (150)
T 2kmw_A 102 DWNKWCD 108 (150)
T ss_dssp CSSSSCC
T ss_pred cchhcCC
Confidence 4555544
No 82
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=22.48 E-value=59 Score=31.02 Aligned_cols=27 Identities=26% Similarity=0.428 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHhcC--CCeeEEEEecCCc
Q 008791 22 DGCKQKVKKVLRKI--DGVYSTNVDVEQG 48 (553)
Q Consensus 22 ~sCa~KIEKaL~kl--~GV~sV~VDlatg 48 (553)
..|-+-+|..+.+| +||.++.+=++.+
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 56666677778888 8999998888776
No 83
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=22.08 E-value=91 Score=27.18 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=15.8
Q ss_pred eEEEEEEeccchhHHHHHHHHHhcC
Q 008791 11 QSCVLRVNVDCDGCKQKVKKVLRKI 35 (553)
Q Consensus 11 qtv~LkVeM~C~sCa~KIEKaL~kl 35 (553)
.++++-..-.|+.|. ++++.|.+.
T Consensus 14 ~~Vvvysk~~Cp~C~-~ak~lL~~~ 37 (127)
T 3l4n_A 14 SPIIIFSKSTCSYSK-GMKELLENE 37 (127)
T ss_dssp CSEEEEECTTCHHHH-HHHHHHHHH
T ss_pred CCEEEEEcCCCccHH-HHHHHHHHh
Confidence 445544446899997 566777763
No 84
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=21.92 E-value=84 Score=29.81 Aligned_cols=65 Identities=11% Similarity=0.157 Sum_probs=36.2
Q ss_pred EEEEEEeccchhH--HHHHHHHHhcC-------CCeeEEEEec---CCcEEEEEec----------CCHHHHHHHHHHcC
Q 008791 12 SCVLRVNVDCDGC--KQKVKKVLRKI-------DGVYSTNVDV---EQGKVTVTGN----------VDPAILIKKLEKLG 69 (553)
Q Consensus 12 tv~LkVeM~C~sC--a~KIEKaL~kl-------~GV~sV~VDl---atgkVtV~g~----------id~eeIikaI~kaG 69 (553)
+++-.|+++|..+ +..|+++|.+- +.| .|+|.+ ..=+++|++. ...+.|.+.|++.|
T Consensus 90 kIra~ieltc~~~dGIe~IK~AL~~a~~~~~~~~~~-~ikI~lvgaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~g 168 (188)
T 1yz7_A 90 TIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDV-EVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAG 168 (188)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHHHHHHHHHHTSTTC-EEEEEECSTTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEEEeCCCchHHHHHHHHHHHHhcccCCCCC-cEEEEEEcCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555566899766 88899888532 333 245543 2233334311 12234566667777
Q ss_pred CceEEcCC
Q 008791 70 KHAELWGP 77 (553)
Q Consensus 70 y~Ael~~~ 77 (553)
-...+...
T Consensus 169 G~~~v~r~ 176 (188)
T 1yz7_A 169 GEATLLRK 176 (188)
T ss_dssp CEEEEECC
T ss_pred CEEEEEEc
Confidence 76666544
No 85
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=21.10 E-value=77 Score=25.30 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=20.4
Q ss_pred EEEEEEeccchhHH-----HHHHHHHhcCCCeeEEEEec
Q 008791 12 SCVLRVNVDCDGCK-----QKVKKVLRKIDGVYSTNVDV 45 (553)
Q Consensus 12 tv~LkVeM~C~sCa-----~KIEKaL~kl~GV~sV~VDl 45 (553)
++++-..-.|+.|. .++++.|.+. +|.-..+|+
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di 40 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDI 40 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEET
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEEC
Confidence 34443446899996 7888888764 454333433
No 86
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=20.71 E-value=2.9e+02 Score=23.14 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=35.5
Q ss_pred eEEEEEEe---c--cchhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCC
Q 008791 11 QSCVLRVN---V--DCDGCKQKVKKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGK 70 (553)
Q Consensus 11 qtv~LkVe---M--~C~sCa~KIEKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy 70 (553)
...+|+|+ + -...--..| +.|.+..||.+++++-..++|+|.+. +.+.+.+|++.+-+
T Consensus 15 ~i~~i~I~~dkIg~vIG~gGk~I-k~I~e~tGv~~IdI~eddG~V~I~g~-~~ea~~~A~~~I~~ 77 (91)
T 2cpq_A 15 FHEEFVVREDLMGLAIGTHGSNI-QQARKVPGVTAIELDEDTGTFRIYGE-SADAVKKARGFLEF 77 (91)
T ss_dssp EEEEEECCHHHHHHHHTTTTHHH-HHHHTSTTEEEEEEETTTTEEEEEES-SHHHHHHHHHHHSC
T ss_pred eEEEEEEChHHhhhhcCCCcHHH-HHHHHHhCCeEEEEEcCCCEEEEEEC-CHHHHHHHHHHHHh
Confidence 35566776 2 122233344 44566679877888766689998763 56666666665443
No 87
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=20.13 E-value=3.1e+02 Score=22.34 Aligned_cols=47 Identities=9% Similarity=0.095 Sum_probs=26.2
Q ss_pred ccchhHHHHH---------HHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCceEEc
Q 008791 19 VDCDGCKQKV---------KKVLRKIDGVYSTNVDVEQGKVTVTGNVDPAILIKKLEKLGKHAELW 75 (553)
Q Consensus 19 M~C~sCa~KI---------EKaL~kl~GV~sV~VDlatgkVtV~g~id~eeIikaI~kaGy~Ael~ 75 (553)
-.|..|...+ .+.+.. .+|.-+.|++ ..+.+.+.+.+++.++...++
T Consensus 37 ~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~~---------d~~~~~~~~~~~~~~~~~~~~ 92 (142)
T 3ewl_A 37 PDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIYP---------DENREEWATKAVYMPQGWIVG 92 (142)
T ss_dssp SSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEEC---------SSCHHHHHHHHTTSCTTCEEE
T ss_pred CCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEEe---------cCCHHHHHHHHHHcCCCccee
Confidence 5899998873 222222 3454444433 235667777777666654443
Done!